BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy15415
MALTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGAGHLWNLSDME
PVEDASKSNWVSIKVTGVKRTGWLAFGYYSERPKYDMLNTSGVLRTCMCNSNETYMLCRK
CKGMPVQK

High Scoring Gene Products

Symbol, full name Information P value
FoxQ2
Forkhead transcription factor Q2
protein from Strongylocentrotus purpuratus 7.3e-08
HCM1
Forkhead transcription factor
gene from Saccharomyces cerevisiae 8.8e-08
foxB
FoxB protein
protein from Ciona intestinalis 8.8e-08
foxq2
forkhead box Q2
gene_product from Danio rerio 9.1e-08
Foxi1
forkhead box I1
protein from Mus musculus 9.1e-08
FOXI1
Forkhead box protein I1
protein from Homo sapiens 1.5e-07
AAR050C
AAR050Cp
protein from Ashbya gossypii ATCC 10895 1.7e-07
HCM1 gene_product from Candida albicans 3.1e-07
Foxn4
forkhead box N4
protein from Mus musculus 4.4e-07
fd19B
forkhead domain 19B
protein from Drosophila melanogaster 5.3e-07
Foxn4
forkhead box N4
gene from Rattus norvegicus 5.7e-07
foxe1
forkhead box E1 (thyroid transcription factor 2)
gene_product from Danio rerio 8.1e-07
fkh-10 gene from Caenorhabditis elegans 9.4e-07
fkh-10
Protein FKH-10
protein from Caenorhabditis elegans 9.4e-07
FHL1
Regulator of ribosomal protein (RP) transcription
gene from Saccharomyces cerevisiae 9.6e-07
FOXN4
Uncharacterized protein
protein from Sus scrofa 1.1e-06
FOXN4
Forkhead box protein N4
protein from Homo sapiens 1.2e-06
FOXN4
Uncharacterized protein
protein from Bos taurus 1.2e-06
AGOS_AEL327W
AEL327Wp
protein from Ashbya gossypii ATCC 10895 1.2e-06
FOXK2
Forkhead box protein K2
protein from Homo sapiens 1.3e-06
Foxc2
forkhead box C2
gene from Rattus norvegicus 1.3e-06
whn
Putative transcription factor (Forkhead /winged-helix class)
protein from Takifugu rubripes 1.4e-06
foxE
FoxE
protein from Ciona intestinalis 1.8e-06
foxa
forkhead box A sequence
gene_product from Danio rerio 2.1e-06
LOC100626570
Uncharacterized protein
protein from Sus scrofa 2.2e-06
foxl1
forkhead box L1
gene_product from Danio rerio 2.3e-06
FOXN4
Uncharacterized protein
protein from Canis lupus familiaris 2.5e-06
foxb1a
forkhead box B1a
gene_product from Danio rerio 2.6e-06
foxb1b
forkhead box B1b
gene_product from Danio rerio 2.6e-06
LOC427656
Uncharacterized protein
protein from Gallus gallus 2.6e-06
foxn4
forkhead box N4
gene_product from Danio rerio 2.7e-06
LOC100301603
Forkhead box B1.2
protein from Oryzias latipes 2.9e-06
FOXB1
Chromosome 13 SCAF14555, whole genome shotgun sequence.
protein from Tetraodon nigroviridis 2.9e-06
foxb2
Forkhead box protein B2
protein from Xenopus laevis 3.0e-06
foxb2
forkhead box B2
gene_product from Danio rerio 3.0e-06
foxb1
Forkhead box protein B1
protein from Xenopus laevis 3.0e-06
foxb1
Foxb1 protein
protein from Xenopus (Silurana) tropicalis 3.1e-06
FOXJ3
Uncharacterized protein
protein from Bos taurus 3.1e-06
FOXB1
Uncharacterized protein
protein from Bos taurus 3.1e-06
FOXB1
Uncharacterized protein
protein from Canis lupus familiaris 3.1e-06
FOXB1
Forkhead box protein B1
protein from Homo sapiens 3.1e-06
FOXB1
Uncharacterized protein
protein from Ailuropoda melanoleuca 3.1e-06
Foxb1
forkhead box B1
protein from Mus musculus 3.1e-06
FOXJ3
Uncharacterized protein
protein from Canis lupus familiaris 3.2e-06
FOXJ2
Uncharacterized protein
protein from Bos taurus 3.2e-06
FoxJ2
Forkhead transcription factor J2
protein from Strongylocentrotus purpuratus 3.7e-06
FOXB2
Uncharacterized protein
protein from Bos taurus 3.7e-06
foxe4
Forkhead box protein E4
protein from Xenopus laevis 3.9e-06
fd102C
forkhead domain 102C
protein from Drosophila melanogaster 3.9e-06
FOXK2
Forkhead box protein K2
protein from Homo sapiens 3.9e-06
FOXN4
Uncharacterized protein
protein from Gallus gallus 4.1e-06
FOXJ3
Forkhead box J3, isoform CRA_b
protein from Homo sapiens 4.2e-06
FOXD1
Forkhead box protein D1
protein from Gallus gallus 4.3e-06
FOXN3
Forkhead box protein N3
protein from Homo sapiens 4.3e-06
Foxd3
forkhead box D3
gene from Rattus norvegicus 4.3e-06
fkh1
Winged helix transcription factor Forkhead-1
protein from Strongylocentrotus purpuratus 4.8e-06
foxe3
forkhead box E3
gene_product from Danio rerio 4.9e-06
croc
crocodile
protein from Drosophila melanogaster 5.1e-06
zgc:194189 gene_product from Danio rerio 5.4e-06
LOC680273
similar to Forkhead box protein L1 (Forkhead-related protein FKHL11) (Forkhead-related transcription factor 7) (FREAC-7)
gene from Rattus norvegicus 5.5e-06
Foxd1
forkhead box D1
gene from Rattus norvegicus 5.5e-06
foxj1.2
Forkhead box protein J1.2
protein from Xenopus laevis 5.7e-06
FOXJ2
Uncharacterized protein
protein from Gallus gallus 6.0e-06
fd96Ca
forkhead domain 96Ca
protein from Drosophila melanogaster 6.6e-06
Foxl1
forkhead box L1
protein from Mus musculus 7.1e-06
LOC100511634
Uncharacterized protein
protein from Sus scrofa 7.1e-06
foxa4-a
Forkhead box protein A4-A
protein from Xenopus laevis 7.4e-06
foxa4
Forkhead box protein A4
protein from Xenopus (Silurana) tropicalis 7.4e-06
FOXL1
Forkhead box protein L1
protein from Homo sapiens 7.4e-06
foxa4-b
Forkhead box protein A4-B
protein from Xenopus laevis 7.4e-06
FOXL1
Uncharacterized protein
protein from Bos taurus 7.5e-06
FOXL1
Uncharacterized protein
protein from Canis lupus familiaris 7.8e-06
Foxj3
forkhead box J3
gene from Rattus norvegicus 7.9e-06
Foxb2
forkhead box B2
protein from Mus musculus 8.3e-06
FOXN3
Forkhead box protein N3
protein from Homo sapiens 8.3e-06
foxa1-a
Forkhead box protein A1-A
protein from Xenopus laevis 8.3e-06
LOC100156565
Uncharacterized protein
protein from Sus scrofa 8.3e-06
Foxe1
forkhead box E1 (thyroid transcription factor 2)
gene from Rattus norvegicus 8.4e-06
FOXB2
Forkhead box protein B2
protein from Homo sapiens 8.4e-06
Foxe1
forkhead box E1
protein from Mus musculus 8.4e-06
foxc1b
forkhead box C1b
gene_product from Danio rerio 8.4e-06
FOXB2
Uncharacterized protein
protein from Canis lupus familiaris 8.4e-06
FOXE1
Uncharacterized protein
protein from Bos taurus 8.5e-06
FOXE1
Forkhead box protein E1
protein from Homo sapiens 8.5e-06
LOC100157892
Uncharacterized protein
protein from Sus scrofa 8.5e-06
foxi1e
Forkhead box protein I1-ema
protein from Xenopus (Silurana) tropicalis 8.5e-06
FOXJ3
Forkhead box protein J3
protein from Homo sapiens 8.6e-06
FOXA1
Hepatocyte nuclear factor 3-alpha
protein from Homo sapiens 8.6e-06
Foxj3
forkhead box J3
protein from Mus musculus 8.6e-06
ches1
checkpoint suppressor 1
gene_product from Danio rerio 8.7e-06
FOXA1
Uncharacterized protein
protein from Canis lupus familiaris 9.0e-06

The BLAST search returned 9 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy15415
        (128 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|Q2V896 - symbol:FoxQ2 "Forkhead transcription f...   129  7.3e-08   1
SGD|S000000661 - symbol:HCM1 "Forkhead transcription fact...   132  8.8e-08   1
UNIPROTKB|Q70VZ2 - symbol:foxB "FoxB protein" species:771...   115  8.8e-08   2
ZFIN|ZDB-GENE-050208-663 - symbol:foxq2 "forkhead box Q2"...   126  9.1e-08   1
MGI|MGI:1096329 - symbol:Foxi1 "forkhead box I1" species:...   107  9.1e-08   2
UNIPROTKB|Q12951 - symbol:FOXI1 "Forkhead box protein I1"...   107  1.5e-07   2
UNIPROTKB|Q75EM9 - symbol:AAR050C "AAR050Cp" species:2848...   128  1.7e-07   1
CGD|CAL0005400 - symbol:HCM1 species:5476 "Candida albica...   127  3.1e-07   1
MGI|MGI:2151057 - symbol:Foxn4 "forkhead box N4" species:...   125  4.4e-07   1
UNIPROTKB|H9L1F8 - symbol:H9L1F8 "Uncharacterized protein...   115  4.8e-07   1
FB|FBgn0031086 - symbol:fd19B "forkhead domain 19B" speci...   119  5.3e-07   1
RGD|1306389 - symbol:Foxn4 "forkhead box N4" species:1011...   123  5.7e-07   1
UNIPROTKB|F1LW53 - symbol:Foxn4 "Protein Foxn4" species:1...   123  6.7e-07   1
ZFIN|ZDB-GENE-061116-1 - symbol:foxe1 "forkhead box E1 (t...   120  8.1e-07   1
WB|WBGene00001442 - symbol:fkh-10 species:6239 "Caenorhab...   113  9.4e-07   1
UNIPROTKB|O17593 - symbol:fkh-10 "Protein FKH-10" species...   113  9.4e-07   1
SGD|S000006308 - symbol:FHL1 "Regulator of ribosomal prot...   125  9.6e-07   1
UNIPROTKB|F1RGB6 - symbol:FOXN4 "Uncharacterized protein"...   121  1.1e-06   1
UNIPROTKB|Q96NZ1 - symbol:FOXN4 "Forkhead box protein N4"...   121  1.2e-06   1
UNIPROTKB|E1B8F2 - symbol:FOXN4 "Uncharacterized protein"...   121  1.2e-06   1
UNIPROTKB|Q758S9 - symbol:AGOS_AEL327W "AEL327Wp" species...   125  1.2e-06   1
UNIPROTKB|E9PM37 - symbol:FOXK2 "Forkhead box protein K2"...   111  1.3e-06   1
RGD|621703 - symbol:Foxc2 "forkhead box C2" species:10116...   111  1.3e-06   1
UNIPROTKB|O57588 - symbol:whn "Putative transcription fac...   118  1.4e-06   1
UNIPROTKB|F1NZP2 - symbol:Gga.51501 "Uncharacterized prot...   110  1.6e-06   1
UNIPROTKB|F1NXR9 - symbol:FOXE3 "Uncharacterized protein"...   113  1.7e-06   1
UNIPROTKB|Q70VZ3 - symbol:foxE "Uncharacterized protein" ...   110  1.8e-06   2
UNIPROTKB|Q9DGG2 - symbol:FOXK1 "Winged helix protein CWH...   109  2.1e-06   1
ZFIN|ZDB-GENE-990415-76 - symbol:foxa "forkhead box A seq...   116  2.1e-06   1
UNIPROTKB|I3LIV8 - symbol:FOXB1 "Uncharacterized protein"...   114  2.2e-06   1
ZFIN|ZDB-GENE-040426-1181 - symbol:foxl1 "forkhead box L1...   116  2.3e-06   1
UNIPROTKB|E2R919 - symbol:FOXN4 "Uncharacterized protein"...   118  2.5e-06   1
ZFIN|ZDB-GENE-990616-47 - symbol:foxb1.2 "forkhead box B1...   114  2.6e-06   1
ZFIN|ZDB-GENE-990415-77 - symbol:foxb1.1 "forkhead box B1...   114  2.6e-06   1
UNIPROTKB|F1NNW9 - symbol:F1NNW9 "Uncharacterized protein...   108  2.6e-06   1
ZFIN|ZDB-GENE-990415-277 - symbol:foxn4 "forkhead box N4"...   118  2.7e-06   1
UNIPROTKB|C1K2Y2 - symbol:Ola.4950 "Forkhead box B1.2" sp...   114  2.9e-06   1
UNIPROTKB|Q4SM19 - symbol:FOXB1 "Uncharacterized protein"...   114  2.9e-06   1
UNIPROTKB|Q8JIT6 - symbol:foxb2 "Forkhead box protein B2"...   114  3.0e-06   1
ZFIN|ZDB-GENE-081104-320 - symbol:foxb2 "forkhead box B2"...   114  3.0e-06   1
UNIPROTKB|O93529 - symbol:foxb1 "Forkhead box protein B1"...   114  3.0e-06   1
UNIPROTKB|B0JZ54 - symbol:foxb1 "Uncharacterized protein"...   114  3.1e-06   1
UNIPROTKB|E1BK17 - symbol:FOXJ3 "Uncharacterized protein"...   118  3.1e-06   1
UNIPROTKB|E1B7H0 - symbol:FOXB1 "Uncharacterized protein"...   114  3.1e-06   1
UNIPROTKB|E2R277 - symbol:FOXB1 "Uncharacterized protein"...   114  3.1e-06   1
UNIPROTKB|Q99853 - symbol:FOXB1 "Forkhead box protein B1"...   114  3.1e-06   1
UNIPROTKB|D2HLR1 - symbol:FOXB1 "Uncharacterized protein"...   114  3.1e-06   1
MGI|MGI:1927549 - symbol:Foxb1 "forkhead box B1" species:...   114  3.1e-06   1
UNIPROTKB|E2R0F1 - symbol:FOXJ3 "Uncharacterized protein"...   118  3.2e-06   1
UNIPROTKB|E1B8C0 - symbol:FOXJ2 "Uncharacterized protein"...   103  3.2e-06   2
UNIPROTKB|Q2V894 - symbol:FoxJ2 "Forkhead transcription f...   116  3.7e-06   1
UNIPROTKB|E1BCB1 - symbol:FOXB2 "Uncharacterized protein"...   112  3.7e-06   1
UNIPROTKB|E1BTF1 - symbol:FOXL1 "Uncharacterized protein"...   112  3.8e-06   1
UNIPROTKB|Q9PTK2 - symbol:foxe4 "Forkhead box protein E4"...   114  3.9e-06   1
FB|FBgn0039937 - symbol:fd102C "forkhead domain 102C" spe...   117  3.9e-06   1
UNIPROTKB|E9PPI7 - symbol:FOXK2 "Forkhead box protein K2"...   111  3.9e-06   1
UNIPROTKB|F1NZC8 - symbol:FOXN4 "Uncharacterized protein"...   115  4.1e-06   1
UNIPROTKB|C9JVP0 - symbol:FOXJ3 "Forkhead box protein J3"...   114  4.2e-06   1
UNIPROTKB|H9L2W5 - symbol:FOXD1 "Forkhead box protein D1"...   106  4.3e-06   1
UNIPROTKB|H0YJ22 - symbol:FOXN3 "Forkhead box protein N3"...   106  4.3e-06   1
RGD|621715 - symbol:Foxd3 "forkhead box D3" species:10116...   106  4.3e-06   1
UNIPROTKB|Q63245 - symbol:Foxd3 "Forkhead box protein D3"...   106  4.3e-06   1
UNIPROTKB|Q9XZM6 - symbol:fkh1 "Winged helix transcriptio...   113  4.8e-06   1
ZFIN|ZDB-GENE-061214-6 - symbol:foxe3 "forkhead box E3" s...   114  4.9e-06   1
FB|FBgn0014143 - symbol:croc "crocodile" species:7227 "Dr...   115  5.1e-06   1
ZFIN|ZDB-GENE-081022-71 - symbol:zgc:194189 "zgc:194189" ...   110  5.4e-06   1
RGD|1594158 - symbol:LOC680273 "similar to Forkhead box p...   105  5.5e-06   1
RGD|621712 - symbol:Foxd1 "forkhead box D1" species:10116...   105  5.5e-06   1
UNIPROTKB|Q32NH9 - symbol:foxj1.2 "Forkhead box protein J...    95  5.7e-06   2
UNIPROTKB|E1BTL6 - symbol:FOXJ2 "Uncharacterized protein"...   103  6.0e-06   2
UNIPROTKB|D4ADN4 - symbol:D4ADN4 "Uncharacterized protein...   112  6.3e-06   1
FB|FBgn0004897 - symbol:fd96Ca "forkhead domain 96Ca" spe...   112  6.6e-06   1
MGI|MGI:1347469 - symbol:Foxl1 "forkhead box L1" species:...   111  7.1e-06   1
UNIPROTKB|F1S6I8 - symbol:FOXL1 "Uncharacterized protein"...   111  7.1e-06   1
UNIPROTKB|P33205 - symbol:foxa4-a "Forkhead box protein A...   112  7.4e-06   1
UNIPROTKB|Q6P839 - symbol:foxa4 "Forkhead box protein A4"...   112  7.4e-06   1
UNIPROTKB|Q12952 - symbol:FOXL1 "Forkhead box protein L1"...   111  7.4e-06   1
UNIPROTKB|P33206 - symbol:foxa4-b "Forkhead box protein A...   112  7.4e-06   1
UNIPROTKB|F1ME43 - symbol:FOXL1 "Uncharacterized protein"...   111  7.5e-06   1
UNIPROTKB|E2QSH5 - symbol:FOXL1 "Uncharacterized protein"...   111  7.8e-06   1
RGD|1311770 - symbol:Foxj3 "forkhead box J3" species:1011...   114  7.9e-06   1
MGI|MGI:1347468 - symbol:Foxb2 "forkhead box B2" species:...   112  8.3e-06   1
UNIPROTKB|G3V3A7 - symbol:FOXN3 "Forkhead box protein N3"...   106  8.3e-06   1
UNIPROTKB|Q6LD29 - symbol:foxa1-a "Forkhead box protein A...   112  8.3e-06   1
UNIPROTKB|F1SIL8 - symbol:FOXB2 "Uncharacterized protein"...   112  8.3e-06   1
RGD|621723 - symbol:Foxe1 "forkhead box E1 (thyroid trans...   111  8.4e-06   1
UNIPROTKB|Q5VYV0 - symbol:FOXB2 "Forkhead box protein B2"...   112  8.4e-06   1
MGI|MGI:1353500 - symbol:Foxe1 "forkhead box E1" species:...   111  8.4e-06   1
ZFIN|ZDB-GENE-010302-2 - symbol:foxc1b "forkhead box C1b"...   112  8.4e-06   1
UNIPROTKB|E2RN41 - symbol:FOXB2 "Uncharacterized protein"...   112  8.4e-06   1
UNIPROTKB|F1ME54 - symbol:FOXE1 "Uncharacterized protein"...   111  8.5e-06   1
UNIPROTKB|O00358 - symbol:FOXE1 "Forkhead box protein E1"...   111  8.5e-06   1
UNIPROTKB|F1SSG9 - symbol:FOXE1 "Uncharacterized protein"...   111  8.5e-06   1
UNIPROTKB|Q6P8A3 - symbol:foxi1e "Forkhead box protein I1...   111  8.5e-06   1
UNIPROTKB|F1M3L2 - symbol:Foxj3 "Protein Foxj3" species:1...   114  8.6e-06   1
UNIPROTKB|Q9UPW0 - symbol:FOXJ3 "Forkhead box protein J3"...   114  8.6e-06   1
UNIPROTKB|B7ZAP5 - symbol:FOXA1 "Hepatocyte nuclear facto...   112  8.6e-06   1
MGI|MGI:2443432 - symbol:Foxj3 "forkhead box J3" species:...   114  8.6e-06   1
ZFIN|ZDB-GENE-040217-1 - symbol:ches1 "checkpoint suppres...   112  8.7e-06   1
UNIPROTKB|E2QSA5 - symbol:FOXA1 "Uncharacterized protein"...   112  9.0e-06   1

WARNING:  Descriptions of 298 database sequences were not reported due to the
          limiting value of parameter V = 100.


>UNIPROTKB|Q2V896 [details] [associations]
            symbol:FoxQ2 "Forkhead transcription factor Q2"
            species:7668 "Strongylocentrotus purpuratus" [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0009790 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0051090 GO:GO:0009888 EMBL:DQ286735 RefSeq:NP_001073018.1
            UniGene:Spu.10103 ProteinModelPortal:Q2V896 GeneID:588775
            KEGG:spu:588775 CTD:565796 Uniprot:Q2V896
        Length = 329

 Score = 129 (50.5 bits), Expect = 7.3e-08, P = 7.3e-08
 Identities = 21/57 (36%), Positives = 36/57 (63%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGAGHLWNLSDMEPVEDASKSNW 70
             +RFP++  N+  W+NS+RHNLS+N  F K  ++  G GH W +     +ED ++ ++
Sbjct:   107 KRFPFFKDNERSWRNSIRHNLSLNECFIKAGRSGDGRGHFWAIHPAN-LEDFARGDY 162


>SGD|S000000661 [details] [associations]
            symbol:HCM1 "Forkhead transcription factor" species:4932
            "Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IEA;IDA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0051300 "spindle pole body
            organization" evidence=IGI] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA;IMP;IDA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0051090 "regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0090418
            "positive regulation of transcription involved in S-phase of
            mitotic cell cycle" evidence=IMP] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0034599 "cellular response to oxidative stress" evidence=IMP]
            [GO:0007005 "mitochondrion organization" evidence=IMP] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IDA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 SGD:S000000661 GO:GO:0005737
            GO:GO:0034599 GO:GO:0043565 GO:GO:0045944 EMBL:X59720 EMBL:BK006937
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000790 GO:GO:0003690 GO:GO:0007005 GO:GO:0008134
            GO:GO:0051090 GO:GO:0051300 eggNOG:COG5025
            GeneTree:ENSGT00700000104094 EMBL:L08252 PIR:S22262
            RefSeq:NP_009991.2 ProteinModelPortal:P25364 SMR:P25364
            DIP:DIP-4993N IntAct:P25364 MINT:MINT-531907 STRING:P25364
            PaxDb:P25364 EnsemblFungi:YCR065W GeneID:850429 KEGG:sce:YCR065W
            HOGENOM:HOG000142335 KO:K09413 OMA:CLAILQS OrthoDB:EOG4XKZH6
            NextBio:966009 Genevestigator:P25364 GermOnline:YCR065W
            GO:GO:0090418 Uniprot:P25364
        Length = 564

 Score = 132 (51.5 bits), Expect = 8.8e-08, P = 8.8e-08
 Identities = 22/41 (53%), Positives = 27/41 (65%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGAGHLWNL 56
             FPYY Q D  W+NS+RHNLS+N  F K  K+  G GH W +
Sbjct:   143 FPYYKQKDASWQNSIRHNLSLNDAFIKTEKSCDGKGHFWEV 183


>UNIPROTKB|Q70VZ2 [details] [associations]
            symbol:foxB "FoxB protein" species:7719 "Ciona
            intestinalis" [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0048513 "organ development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 GO:GO:0051090 GO:GO:0048513
            GO:GO:0009888 HOGENOM:HOG000007545 HSSP:Q01167 EMBL:AJ534402
            RefSeq:NP_001027695.1 UniGene:Cin.32671 ProteinModelPortal:Q70VZ2
            SMR:Q70VZ2 GeneID:445716 KEGG:cin:445716 CTD:445716
            HOVERGEN:HBG065788 InParanoid:Q70VZ2 Uniprot:Q70VZ2
        Length = 475

 Score = 115 (45.5 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
 Identities = 22/45 (48%), Positives = 28/45 (62%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             +RFP+Y  N  RW+NS+RHNLS N  F K  +     G G LW+L
Sbjct:    45 DRFPFYRNNTQRWQNSLRHNLSFNDCFVKVPRRGDQPGKGSLWSL 89

 Score = 37 (18.1 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
 Identities = 6/20 (30%), Positives = 11/20 (55%)

Query:    80 RTGWLAFGYYSERPKYDMLN 99
             R+G +      + P Y+M+N
Sbjct:   139 RSGEVGLNSIEDNPSYNMIN 158


>ZFIN|ZDB-GENE-050208-663 [details] [associations]
            symbol:foxq2 "forkhead box Q2" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005667 "transcription factor
            complex" evidence=IBA] [GO:0051090 "regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-050208-663 Gene3D:1.10.10.10 InterPro:IPR011991
            GeneTree:ENSGT00700000104051 EMBL:BX088720 IPI:IPI00608545
            UniGene:Dr.120163 Ensembl:ENSDART00000136744 HOVERGEN:HBG083031
            Uniprot:F6PES3
        Length = 263

 Score = 126 (49.4 bits), Expect = 9.1e-08, P = 9.1e-08
 Identities = 34/108 (31%), Positives = 51/108 (47%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGAGHLWNLSDMEPVEDASKSNWVSI 73
             + +PY+   D  W+NSVRHNLS+N  F K  ++  G GH W +      +D S  ++   
Sbjct:   138 DHYPYFKSKDKNWRNSVRHNLSLNECFIKAGRSDNGKGHFWAIHPAN-FQDFSNGDYHRR 196

Query:    74 KVTG-VKR-TGWLAFGYYSERPKYDMLNTSGVLRT-CMCNSNETYMLC 118
             +    ++R TG L    Y+    Y  L    + RT C C      +LC
Sbjct:   197 RARRRIRRVTGQLP---YALPAHYQTLGR--LKRTPCWCCPPSHPLLC 239


>MGI|MGI:1096329 [details] [associations]
            symbol:Foxi1 "forkhead box I1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IC] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009957 "epidermal cell fate specification" evidence=IBA]
            [GO:0042472 "inner ear morphogenesis" evidence=IMP] [GO:0043049
            "otic placode formation" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IDA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO;IDA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 MGI:MGI:1096329 GO:GO:0043565
            GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0044212
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0051090
            GO:GO:0043049 eggNOG:COG5025 EMBL:AL671971 GO:GO:0009957
            GeneTree:ENSGT00690000101636 CTD:2299 HOGENOM:HOG000236333
            HOVERGEN:HBG067944 KO:K09401 OMA:QAYGVQR OrthoDB:EOG4XKV7D
            EMBL:AK019994 EMBL:BC007475 IPI:IPI00187526 RefSeq:NP_076396.3
            UniGene:Mm.32926 ProteinModelPortal:Q922I5 SMR:Q922I5 STRING:Q922I5
            PhosphoSite:Q922I5 PRIDE:Q922I5 Ensembl:ENSMUST00000060271
            GeneID:14233 KEGG:mmu:14233 UCSC:uc007ikw.1 InParanoid:Q922I5
            NextBio:285511 Bgee:Q922I5 CleanEx:MM_FOXI1 Genevestigator:Q922I5
            GermOnline:ENSMUSG00000047861 Uniprot:Q922I5
        Length = 372

 Score = 107 (42.7 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
 Identities = 19/45 (42%), Positives = 29/45 (64%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             + FP+YN++   W+NS+RHNLS+N  F+K  +     G G+ W L
Sbjct:   149 DNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTL 193

 Score = 42 (19.8 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
 Identities = 13/54 (24%), Positives = 22/54 (40%)

Query:    55 NLSDMEPVEDASK----SNWVSIKVTGVKRTGWLAFGYYSERPKYDMLNTSGVL 104
             N +   P+ + S       W +   T     G   F  +S    Y+ +NT+G+L
Sbjct:   312 NFNSYTPLTNLSSHGNGGEWANPVATNALGYGGSVFNQFSPH-FYNSINTNGIL 364


>UNIPROTKB|Q12951 [details] [associations]
            symbol:FOXI1 "Forkhead box protein I1" species:9606 "Homo
            sapiens" [GO:0009790 "embryo development" evidence=NAS] [GO:0008301
            "DNA binding, bending" evidence=IBA;NAS] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0009957 "epidermal cell fate
            specification" evidence=IBA] [GO:0043049 "otic placode formation"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0005634
            "nucleus" evidence=IC] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=ISS] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0043565 GO:GO:0045944
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0044212 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 GO:GO:0043049 eggNOG:COG5025
            GO:GO:0009957 EMBL:BC029778 EMBL:L13203 EMBL:AY707089 EMBL:U13224
            IPI:IPI00158273 IPI:IPI00220405 PIR:A47450 PIR:S51629
            RefSeq:NP_036320.2 RefSeq:NP_658982.1 UniGene:Hs.87236
            ProteinModelPortal:Q12951 SMR:Q12951 STRING:Q12951
            PhosphoSite:Q12951 DMDM:150421552 PRIDE:Q12951 DNASU:2299
            Ensembl:ENST00000306268 Ensembl:ENST00000449804 GeneID:2299
            KEGG:hsa:2299 UCSC:uc003mai.4 UCSC:uc003maj.4 CTD:2299
            GeneCards:GC05P169465 HGNC:HGNC:3815 MIM:601093 neXtProt:NX_Q12951
            Orphanet:705 PharmGKB:PA28232 HOGENOM:HOG000236333
            HOVERGEN:HBG067944 InParanoid:Q12951 KO:K09401 OMA:QAYGVQR
            OrthoDB:EOG4XKV7D PhylomeDB:Q12951 GenomeRNAi:2299 NextBio:9331
            ArrayExpress:Q12951 Bgee:Q12951 CleanEx:HS_FOXI1
            Genevestigator:Q12951 GermOnline:ENSG00000168269 Uniprot:Q12951
        Length = 378

 Score = 107 (42.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
 Identities = 19/45 (42%), Positives = 29/45 (64%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             + FP+YN++   W+NS+RHNLS+N  F+K  +     G G+ W L
Sbjct:   155 DNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTL 199

 Score = 40 (19.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query:    69 NWVSIKVTGVKRTGWLAFGYYSERPKYDMLNTSGVL 104
             +W +   T +   G      +S    Y+ +NTSGVL
Sbjct:   336 DWANPMPTNMLSYGGSVLSQFSPH-FYNSVNTSGVL 370


>UNIPROTKB|Q75EM9 [details] [associations]
            symbol:AAR050C "AAR050Cp" species:284811 "Ashbya gossypii
            ATCC 10895" [GO:0000790 "nuclear chromatin" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0000790
            GO:GO:0003690 GO:GO:0008134 GO:GO:0051090 EMBL:AE016814
            GenomeReviews:AE016814_GR HSSP:Q01167 KO:K09413 OrthoDB:EOG4XKZH6
            RefSeq:NP_982591.1 ProteinModelPortal:Q75EM9 SMR:Q75EM9
            EnsemblFungi:AAS50415 GeneID:4618705 KEGG:ago:AGOS_AAR050C
            PhylomeDB:Q75EM9 Uniprot:Q75EM9
        Length = 453

 Score = 128 (50.1 bits), Expect = 1.7e-07, P = 1.7e-07
 Identities = 22/41 (53%), Positives = 27/41 (65%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGAGHLWNL 56
             FPYY   D  W+NS+RHNLS+N  F KG K+  G GH W +
Sbjct:   114 FPYYRLCDAGWQNSIRHNLSLNEAFVKGGKSLDGKGHFWEI 154


>CGD|CAL0005400 [details] [associations]
            symbol:HCM1 species:5476 "Candida albicans" [GO:0000790
            "nuclear chromatin" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0051300 "spindle pole body organization"
            evidence=IEA] [GO:0090418 "positive regulation of transcription
            involved in S-phase of mitotic cell cycle" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0034599 "cellular
            response to oxidative stress" evidence=IEA] [GO:0007005
            "mitochondrion organization" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 CGD:CAL0005400 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 EMBL:AACQ01000001 EMBL:AACQ01000002 eggNOG:COG5025
            KO:K09413 RefSeq:XP_723348.1 RefSeq:XP_723538.1
            ProteinModelPortal:Q5APB2 SMR:Q5APB2 GeneID:3634794 GeneID:3635054
            KEGG:cal:CaO19.12316 KEGG:cal:CaO19.4853 Uniprot:Q5APB2
        Length = 579

 Score = 127 (49.8 bits), Expect = 3.1e-07, P = 3.1e-07
 Identities = 21/41 (51%), Positives = 27/41 (65%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGAGHLW 54
             + F YY + D  W+NS+RHNLS+N  F KG K+  G GH W
Sbjct:   179 DTFKYYKKGDVGWQNSIRHNLSLNKAFIKGEKSKDGKGHFW 219


>MGI|MGI:2151057 [details] [associations]
            symbol:Foxn4 "forkhead box N4" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008016 "regulation of heart
            contraction" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0030154 "cell
            differentiation" evidence=IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IBA] [GO:0048513 "organ
            development" evidence=IBA] [GO:0048663 "neuron fate commitment"
            evidence=IGI] [GO:0048675 "axon extension" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 MGI:MGI:2151057
            GO:GO:0045893 GO:GO:0043565 GO:GO:0008016 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0000122
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 GO:GO:0048663 GO:GO:0048513
            GO:GO:0048675 eggNOG:COG5025 GO:GO:0009888
            GeneTree:ENSGT00700000104051 KO:K09407 CTD:121643
            HOGENOM:HOG000232153 HOVERGEN:HBG051655 OMA:QQMASGR EMBL:AY039039
            EMBL:AF323488 EMBL:BC092242 EMBL:BC130222 IPI:IPI00170120
            RefSeq:NP_683737.2 UniGene:Mm.17709 ProteinModelPortal:Q8K3Q3
            SMR:Q8K3Q3 STRING:Q8K3Q3 PhosphoSite:Q8K3Q3 PRIDE:Q8K3Q3
            DNASU:116810 Ensembl:ENSMUST00000044790 GeneID:116810
            KEGG:mmu:116810 UCSC:uc008yzk.1 InParanoid:Q0VGP0 OrthoDB:EOG4D7Z5G
            NextBio:369138 Bgee:Q8K3Q3 CleanEx:MM_FOXN4 Genevestigator:Q8K3Q3
            GermOnline:ENSMUSG00000042002 Uniprot:Q8K3Q3
        Length = 521

 Score = 125 (49.1 bits), Expect = 4.4e-07, P = 4.4e-07
 Identities = 29/76 (38%), Positives = 41/76 (53%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA---GHLW--NLSDMEPVEDA 65
             F +E FPY+    D WKNSVRHNLS+N  F K    S G+   G LW  NL+ ++ +E+ 
Sbjct:   226 FMKEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVETKSSGSSRKGCLWALNLARIDKMEE- 284

Query:    66 SKSNWVSIKVTGVKRT 81
                 W    +  + R+
Sbjct:   285 EMHKWKRKDLAAIHRS 300


>UNIPROTKB|H9L1F8 [details] [associations]
            symbol:H9L1F8 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GeneTree:ENSGT00700000104051 EMBL:AADN02061683
            Ensembl:ENSGALT00000035515 Uniprot:H9L1F8
        Length = 113

 Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 27/76 (35%), Positives = 39/76 (51%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA---GHLW--NLSDMEPVEDA 65
             F +E FPY+    D WKNSVRHNLS+N  F K      G    G LW  N + ++ +E+ 
Sbjct:    35 FMKEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKMSGTSRKGCLWALNPAKIDKMEEE 94

Query:    66 SKSNWVSIKVTGVKRT 81
              +  W    +  + R+
Sbjct:    95 MQK-WKRKDLAAIHRS 109


>FB|FBgn0031086 [details] [associations]
            symbol:fd19B "forkhead domain 19B" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP] [GO:0016199
            "axon midline choice point recognition" evidence=IBA] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0048665 "neuron fate specification"
            evidence=IBA] [GO:0002052 "positive regulation of neuroblast
            proliferation" evidence=IBA] [GO:0007346 "regulation of mitotic
            cell cycle" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0045787 "positive regulation of cell
            cycle" evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0035058
            "nonmotile primary cilium assembly" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IBA]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0009953 "dorsal/ventral pattern formation"
            evidence=IBA] [GO:0007380 "specification of segmental identity,
            head" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0009792 GO:GO:0007346 EMBL:AE014298
            GO:GO:0043565 GO:GO:0045944 GO:GO:0016199 GO:GO:0045665
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0009953 GO:GO:0008134
            GO:GO:0048665 GO:GO:0045787 GO:GO:0002052 GO:GO:0051090
            GO:GO:0035058 GO:GO:0007380 GO:GO:0009888 HSSP:Q63245
            GeneTree:ENSGT00700000104094 RefSeq:NP_608369.1 UniGene:Dm.27592
            ProteinModelPortal:Q9W5X5 SMR:Q9W5X5 STRING:Q9W5X5 PRIDE:Q9W5X5
            EnsemblMetazoa:FBtr0070032 GeneID:33010 KEGG:dme:Dmel_CG9571
            UCSC:CG9571-RA CTD:33010 FlyBase:FBgn0031086 InParanoid:Q9W5X5
            OrthoDB:EOG4280HS PhylomeDB:Q9W5X5 GenomeRNAi:33010 NextBio:781504
            ArrayExpress:Q9W5X5 Bgee:Q9W5X5 Uniprot:Q9W5X5
        Length = 260

 Score = 119 (46.9 bits), Expect = 5.3e-07, P = 5.3e-07
 Identities = 28/73 (38%), Positives = 38/73 (52%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNLSDMEPVEDASKSNWV 71
             + FPYY      W+NS+RHNLS+NP F +  +A    G GH W L      ED S     
Sbjct:    90 DNFPYYRTRKSVWQNSIRHNLSLNPFFVRVPRALDDPGRGHYWALDPY--AEDLSIG--- 144

Query:    72 SIKVTG-VKRTGW 83
               + TG ++R+ W
Sbjct:   145 --ETTGRLRRSNW 155


>RGD|1306389 [details] [associations]
            symbol:Foxn4 "forkhead box N4" species:10116 "Rattus norvegicus"
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008016 "regulation of
            heart contraction" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0030154 "cell
            differentiation" evidence=ISO] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0048513 "organ development"
            evidence=IBA] [GO:0048663 "neuron fate commitment"
            evidence=IEA;ISO] [GO:0048675 "axon extension" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 RGD:1306389 GO:GO:0043565
            GO:GO:0008016 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 GO:GO:0051090 GO:GO:0048513
            GO:GO:0048675 GO:GO:0009888 GeneTree:ENSGT00700000104051
            IPI:IPI00951428 Ensembl:ENSRNOT00000065060 Uniprot:F1M4N5
        Length = 448

 Score = 123 (48.4 bits), Expect = 5.7e-07, P = 5.7e-07
 Identities = 29/76 (38%), Positives = 40/76 (52%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA---GHLW--NLSDMEPVEDA 65
             F +E FPY+    D WKNSVRHNLS+N  F K      G+   G LW  NL+ ++ VE+ 
Sbjct:   197 FMKEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVETKPSGSSRKGCLWALNLARIDKVEE- 255

Query:    66 SKSNWVSIKVTGVKRT 81
                 W    +  + R+
Sbjct:   256 EMHKWKRKDLAAIHRS 271


>UNIPROTKB|F1LW53 [details] [associations]
            symbol:Foxn4 "Protein Foxn4" species:10116 "Rattus
            norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            RGD:1306389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0048663
            IPI:IPI00371218 Ensembl:ENSRNOT00000000871 Uniprot:F1LW53
        Length = 493

 Score = 123 (48.4 bits), Expect = 6.7e-07, P = 6.7e-07
 Identities = 29/76 (38%), Positives = 40/76 (52%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA---GHLW--NLSDMEPVEDA 65
             F +E FPY+    D WKNSVRHNLS+N  F K      G+   G LW  NL+ ++ VE+ 
Sbjct:   197 FMKEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVETKPSGSSRKGCLWALNLARIDKVEE- 255

Query:    66 SKSNWVSIKVTGVKRT 81
                 W    +  + R+
Sbjct:   256 EMHKWKRKDLAAIHRS 271


>ZFIN|ZDB-GENE-061116-1 [details] [associations]
            symbol:foxe1 "forkhead box E1 (thyroid transcription
            factor 2)" species:7955 "Danio rerio" [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0048703 "embryonic
            viscerocranium morphogenesis" evidence=IMP] [GO:0003419 "growth
            plate cartilage chondrocyte proliferation" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-061116-1 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0003419
            GO:GO:0048703 GeneTree:ENSGT00700000104135 CTD:2304 KO:K09398
            EMBL:BX005000 IPI:IPI00902176 RefSeq:XP_696065.1 UniGene:Dr.101314
            Ensembl:ENSDART00000109297 GeneID:567676 KEGG:dre:567676
            OMA:QLPSAYY NextBio:20888793 Uniprot:E7EZ33
        Length = 354

 Score = 120 (47.3 bits), Expect = 8.1e-07, P = 8.1e-07
 Identities = 33/105 (31%), Positives = 51/105 (48%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNLSDMEP-VEDASK 67
             F  ERFP+Y  N  +W+NS+RHNL++N  F K  +     G G+ W L   +P  ED  +
Sbjct:    69 FITERFPFYRDNSKKWQNSIRHNLTLNDCFIKIPREPGRPGKGNYWAL---DPNAEDMFE 125

Query:    68 SNWVSIKVTGVKRTGWLAFG-YYSERPKYDMLNTSGVLRTCMCNS 111
             S     +    KR+ +  +  Y  E P +  +    + R+   NS
Sbjct:   126 SGSFLRRRKRFKRSDFTTYSSYVHESPVFSPVQ---IARSAYANS 167


>WB|WBGene00001442 [details] [associations]
            symbol:fkh-10 species:6239 "Caenorhabditis elegans"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0009790 GO:GO:0003690 EMBL:Z81038 GO:GO:0008134 GO:GO:0007389
            GO:GO:0051090 eggNOG:COG5025 GO:GO:0009888
            GeneTree:ENSGT00700000104051 RefSeq:NP_492676.2
            ProteinModelPortal:O17593 SMR:O17593 EnsemblMetazoa:C25A1.2.1
            EnsemblMetazoa:C25A1.2.2 GeneID:182874 KEGG:cel:CELE_C25A1.2
            UCSC:C25A1.2 CTD:182874 WormBase:C25A1.2 HOGENOM:HOG000019588
            InParanoid:O17593 OMA:EVYEWIM NextBio:919142 Uniprot:O17593
        Length = 194

 Score = 113 (44.8 bits), Expect = 9.4e-07, P = 9.4e-07
 Identities = 18/39 (46%), Positives = 25/39 (64%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGAGHLW 54
             +PY+      W+NS+RHNLS+N  F K  +A+ G GH W
Sbjct:    76 YPYFRSRGAGWRNSIRHNLSLNDCFVKAGRAANGKGHYW 114


>UNIPROTKB|O17593 [details] [associations]
            symbol:fkh-10 "Protein FKH-10" species:6239 "Caenorhabditis
            elegans" [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 EMBL:Z81038
            GO:GO:0008134 GO:GO:0007389 GO:GO:0051090 eggNOG:COG5025
            GO:GO:0009888 GeneTree:ENSGT00700000104051 RefSeq:NP_492676.2
            ProteinModelPortal:O17593 SMR:O17593 EnsemblMetazoa:C25A1.2.1
            EnsemblMetazoa:C25A1.2.2 GeneID:182874 KEGG:cel:CELE_C25A1.2
            UCSC:C25A1.2 CTD:182874 WormBase:C25A1.2 HOGENOM:HOG000019588
            InParanoid:O17593 OMA:EVYEWIM NextBio:919142 Uniprot:O17593
        Length = 194

 Score = 113 (44.8 bits), Expect = 9.4e-07, P = 9.4e-07
 Identities = 18/39 (46%), Positives = 25/39 (64%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGAGHLW 54
             +PY+      W+NS+RHNLS+N  F K  +A+ G GH W
Sbjct:    76 YPYFRSRGAGWRNSIRHNLSLNDCFVKAGRAANGKGHYW 114


>SGD|S000006308 [details] [associations]
            symbol:FHL1 "Regulator of ribosomal protein (RP)
            transcription" species:4932 "Saccharomyces cerevisiae" [GO:0003677
            "DNA binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA;IDA] [GO:0010688 "negative regulation of
            ribosomal protein gene transcription from RNA polymerase II
            promoter" evidence=IGI;IMP] [GO:0060963 "positive regulation of
            ribosomal protein gene transcription from RNA polymerase II
            promoter" evidence=IGI;IMP] [GO:0000790 "nuclear chromatin"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005634
            "nucleus" evidence=IEA;IDA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0001225 "RNA polymerase II transcription
            coactivator binding" evidence=IPI] [GO:0001226 "RNA polymerase II
            transcription corepressor binding" evidence=IPI] [GO:0032545 "CURI
            complex" evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IBA] InterPro:IPR000253
            InterPro:IPR001766 InterPro:IPR008984 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF00498 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50006 PROSITE:PS50039 SMART:SM00240
            SMART:SM00339 SGD:S000006308 GO:GO:0005730 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:2.60.200.20
            SUPFAM:SSF49879 GO:GO:0005667 GO:GO:0003705 GO:GO:0000790
            EMBL:BK006949 GO:GO:0003690 GO:GO:0051090 EMBL:U32445 GO:GO:0010688
            eggNOG:COG5025 OMA:ICEWIAN OrthoDB:EOG4JDMGH EMBL:Z28348 PIR:S43738
            RefSeq:NP_015429.1 ProteinModelPortal:P39521 SMR:P39521
            DIP:DIP-3821N IntAct:P39521 MINT:MINT-495767 STRING:P39521
            PaxDb:P39521 PeptideAtlas:P39521 EnsemblFungi:YPR104C GeneID:856219
            KEGG:sce:YPR104C CYGD:YPR104c GeneTree:ENSGT00700000105271
            HOGENOM:HOG000000999 NextBio:981444 Genevestigator:P39521
            GermOnline:YPR104C GO:GO:0060963 Uniprot:P39521
        Length = 936

 Score = 125 (49.1 bits), Expect = 9.6e-07, P = 9.6e-07
 Identities = 25/46 (54%), Positives = 30/46 (65%)

Query:    13 RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGAGHLWNLSD 58
             RE FPYY    D W++SVRHNLS+N  FRK  K  +G G LW L +
Sbjct:   493 RELFPYYKYCPDGWQSSVRHNLSLNKSFRKVSK--EGKGWLWGLDE 536


>UNIPROTKB|F1RGB6 [details] [associations]
            symbol:FOXN4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0048663 "neuron fate commitment" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0048663 GeneTree:ENSGT00700000104051
            OMA:QQMASGR EMBL:CU329699 Ensembl:ENSSSCT00000010888 Uniprot:F1RGB6
        Length = 489

 Score = 121 (47.7 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 28/76 (36%), Positives = 40/76 (52%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA---GHLW--NLSDMEPVEDA 65
             F +E FPY+    D WKNSVRHNLS+N  F K      G+   G LW  NL+ ++ +E+ 
Sbjct:   194 FMKEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKMSGSSRKGCLWALNLARIDKMEE- 252

Query:    66 SKSNWVSIKVTGVKRT 81
                 W    +  + R+
Sbjct:   253 EMHKWKRKDLAAIHRS 268


>UNIPROTKB|Q96NZ1 [details] [associations]
            symbol:FOXN4 "Forkhead box protein N4" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0048663 "neuron fate commitment" evidence=IEA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008016 "regulation of
            heart contraction" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0048513 "organ
            development" evidence=IBA] [GO:0048675 "axon extension"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0043565 GO:GO:0008016 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0051090
            GO:GO:0048663 GO:GO:0048513 GO:GO:0048675 eggNOG:COG5025
            GO:GO:0009888 KO:K09407 EMBL:AC012384 EMBL:AF425596 EMBL:AF425597
            EMBL:AK131519 IPI:IPI00289457 IPI:IPI00377176 RefSeq:NP_998761.2
            UniGene:Hs.528316 ProteinModelPortal:Q96NZ1 SMR:Q96NZ1
            STRING:Q96NZ1 PhosphoSite:Q96NZ1 DMDM:71153520 PRIDE:Q96NZ1
            Ensembl:ENST00000299162 Ensembl:ENST00000355216
            Ensembl:ENST00000423960 GeneID:121643 KEGG:hsa:121643
            UCSC:uc001toe.4 CTD:121643 GeneCards:GC12M109715 HGNC:HGNC:21399
            MIM:609429 neXtProt:NX_Q96NZ1 PharmGKB:PA134982965
            HOGENOM:HOG000232153 HOVERGEN:HBG051655 InParanoid:Q96NZ1
            OMA:QQMASGR GenomeRNAi:121643 NextBio:80794 Bgee:Q96NZ1
            CleanEx:HS_FOXN4 Genevestigator:Q96NZ1 GermOnline:ENSG00000139445
            Uniprot:Q96NZ1
        Length = 517

 Score = 121 (47.7 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 28/76 (36%), Positives = 40/76 (52%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA---GHLW--NLSDMEPVEDA 65
             F +E FPY+    D WKNSVRHNLS+N  F K      G+   G LW  NL+ ++ +E+ 
Sbjct:   222 FMKEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKMSGSSRKGCLWALNLARIDKMEE- 280

Query:    66 SKSNWVSIKVTGVKRT 81
                 W    +  + R+
Sbjct:   281 EMHKWKRKDLAAIHRS 296


>UNIPROTKB|E1B8F2 [details] [associations]
            symbol:FOXN4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0048663 "neuron fate commitment" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0048663 GeneTree:ENSGT00700000104051
            OMA:QQMASGR EMBL:DAAA02045481 IPI:IPI00686151
            Ensembl:ENSBTAT00000014397 Uniprot:E1B8F2
        Length = 519

 Score = 121 (47.7 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 28/76 (36%), Positives = 40/76 (52%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA---GHLW--NLSDMEPVEDA 65
             F +E FPY+    D WKNSVRHNLS+N  F K      G+   G LW  NL+ ++ +E+ 
Sbjct:   224 FMKEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKMSGSSRKGCLWALNLARIDKMEE- 282

Query:    66 SKSNWVSIKVTGVKRT 81
                 W    +  + R+
Sbjct:   283 EMHKWKRKDLAAIHRS 298


>UNIPROTKB|Q758S9 [details] [associations]
            symbol:AGOS_AEL327W "AEL327Wp" species:284811 "Ashbya
            gossypii ATCC 10895" [GO:0000790 "nuclear chromatin" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0005730
            "nucleolus" evidence=IBA] [GO:0010688 "negative regulation of
            ribosomal protein gene transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0032545 "CURI complex" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0070491
            "repressing transcription factor binding" evidence=IBA]
            InterPro:IPR000253 InterPro:IPR001766 InterPro:IPR008984
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498 PRINTS:PR00053
            PROSITE:PS00658 PROSITE:PS50006 PROSITE:PS50039 SMART:SM00240
            SMART:SM00339 GO:GO:0005730 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000790 GO:GO:0003690 GO:GO:0051090
            EMBL:AE016818 GenomeReviews:AE016818_GR GO:GO:0070491 GO:GO:0010688
            GO:GO:0032545 OrthoDB:EOG4JDMGH RefSeq:NP_984533.2 STRING:Q758S9
            EnsemblFungi:AAS52357 GeneID:4620703 KEGG:ago:AGOS_AEL327W
            Uniprot:Q758S9
        Length = 1134

 Score = 125 (49.1 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 27/55 (49%), Positives = 34/55 (61%)

Query:    13 RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGAGHLWNLSDMEPVEDASK 67
             RE +PYY    D W++SVRHNLS+N  FRK  K  +G G LW L D E + +  K
Sbjct:   731 RELYPYYKYCPDGWQSSVRHNLSLNKSFRKVSK--EGKGWLWGL-DEEYIAEREK 782


>UNIPROTKB|E9PM37 [details] [associations]
            symbol:FOXK2 "Forkhead box protein K2" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 EMBL:AC124287 HGNC:HGNC:6036
            ChiTaRS:FOXK2 EMBL:AC124283 IPI:IPI01013081
            ProteinModelPortal:E9PM37 SMR:E9PM37 Ensembl:ENST00000531030
            ArrayExpress:E9PM37 Bgee:E9PM37 Uniprot:E9PM37
        Length = 172

 Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 25/69 (36%), Positives = 40/69 (57%)

Query:     3 LTANLRLFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL--- 56
             LT N  ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +   
Sbjct:    90 LTLN-GIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPA 148

Query:    57 SDMEPVEDA 65
             S+ + +E A
Sbjct:   149 SESKLIEQA 157


>RGD|621703 [details] [associations]
            symbol:Foxc2 "forkhead box C2" species:10116 "Rattus norvegicus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0001077 "RNA polymerase
            II core promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in positive regulation of
            transcription" evidence=ISO] [GO:0001501 "skeletal system
            development" evidence=ISO] [GO:0001503 "ossification"
            evidence=ISO;IBA] [GO:0001568 "blood vessel development"
            evidence=ISO] [GO:0001569 "patterning of blood vessels"
            evidence=ISO;IBA] [GO:0001570 "vasculogenesis" evidence=IBA]
            [GO:0001656 "metanephros development" evidence=ISO;IBA] [GO:0001657
            "ureteric bud development" evidence=ISO;IBA] [GO:0001756
            "somitogenesis" evidence=ISO;IBA] [GO:0001822 "kidney development"
            evidence=ISO] [GO:0001945 "lymph vessel development" evidence=ISO]
            [GO:0001946 "lymphangiogenesis" evidence=ISO;IBA] [GO:0001974
            "blood vessel remodeling" evidence=ISO;IBA] [GO:0003007 "heart
            morphogenesis" evidence=ISO] [GO:0003677 "DNA binding"
            evidence=ISO;IDA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=ISO;IBA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] [GO:0007219 "Notch signaling pathway"
            evidence=ISO;IBA] [GO:0007507 "heart development" evidence=ISO]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008283 "cell proliferation" evidence=ISO] [GO:0008286 "insulin
            receptor signaling pathway" evidence=ISO;IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009725 "response to hormone
            stimulus" evidence=ISO] [GO:0010595 "positive regulation of
            endothelial cell migration" evidence=ISO] [GO:0014032 "neural crest
            cell development" evidence=ISO] [GO:0014034 "neural crest cell fate
            commitment" evidence=IBA] [GO:0030199 "collagen fibril
            organization" evidence=ISO;IBA] [GO:0031490 "chromatin DNA binding"
            evidence=ISO;IBA] [GO:0033630 "positive regulation of cell adhesion
            mediated by integrin" evidence=ISO] [GO:0035050 "embryonic heart
            tube development" evidence=ISO;IBA] [GO:0035470 "positive
            regulation of vascular wound healing" evidence=ISO] [GO:0043010
            "camera-type eye development" evidence=ISO;IBA] [GO:0043066
            "negative regulation of apoptotic process" evidence=ISO]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=ISO] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISO;IBA]
            [GO:0046620 "regulation of organ growth" evidence=ISO;IBA]
            [GO:0048010 "vascular endothelial growth factor receptor signaling
            pathway" evidence=ISO;IBA] [GO:0048341 "paraxial mesoderm
            formation" evidence=ISO] [GO:0048343 "paraxial mesodermal cell fate
            commitment" evidence=ISO;IBA] [GO:0048701 "embryonic cranial
            skeleton morphogenesis" evidence=ISO] [GO:0048703 "embryonic
            viscerocranium morphogenesis" evidence=ISO;IBA] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=ISO] [GO:0048844
            "artery morphogenesis" evidence=ISO;IBA] [GO:0050880 "regulation of
            blood vessel size" evidence=ISO;IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0055010 "ventricular cardiac muscle tissue
            morphogenesis" evidence=ISO;IBA] [GO:0060038 "cardiac muscle cell
            proliferation" evidence=ISO;IBA] [GO:0072011 "glomerular
            endothelium development" evidence=ISO] [GO:0072112 "glomerular
            visceral epithelial cell differentiation" evidence=ISO] [GO:0072144
            "glomerular mesangial cell development" evidence=ISO] [GO:0090050
            "positive regulation of cell migration involved in sprouting
            angiogenesis" evidence=ISO] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 RGD:621703 GO:GO:0008286
            GO:GO:0043565 GO:GO:0030199 GO:GO:0045944 GO:GO:0007219
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0001756 GO:GO:0043010 GO:GO:0001974
            GO:GO:0003690 GO:GO:0001946 GO:GO:0001569 GO:GO:0001570
            GO:GO:0008134 GO:GO:0050880 GO:GO:0001503 GO:GO:0048844
            GO:GO:0031490 GO:GO:0001656 GO:GO:0001657 GO:GO:0051090
            GO:GO:0046620 GO:GO:0048010 GO:GO:0060038 GO:GO:0055010
            GO:GO:0048703 GO:GO:0035050 GO:GO:0014034 GO:GO:0048343 EMBL:L13193
            IPI:IPI00206921 PIR:I60918 UniGene:Rn.216723
            ProteinModelPortal:Q63246 SMR:Q63246 Genevestigator:Q63246
            Uniprot:Q63246
        Length = 101

 Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 23/56 (41%), Positives = 32/56 (57%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             +T N    F  +RFP+Y +N   W+NS+RHNLS+N  F K  +  +  G G  W L
Sbjct:    24 ITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 79


>UNIPROTKB|O57588 [details] [associations]
            symbol:whn "Putative transcription factor (Forkhead
            /winged-helix class)" species:31033 "Takifugu rubripes" [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008016 "regulation of
            heart contraction" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0048513 "organ
            development" evidence=IBA] [GO:0048675 "axon extension"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0043565
            GO:GO:0008016 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 GO:GO:0051090 GO:GO:0048513
            GO:GO:0048675 eggNOG:COG5025 GO:GO:0009888 HSSP:Q63244
            HOGENOM:HOG000232153 OrthoDB:EOG4D7Z5G EMBL:X97021
            ProteinModelPortal:O57588 InParanoid:O57588 Uniprot:O57588
        Length = 358

 Score = 118 (46.6 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 27/76 (35%), Positives = 41/76 (53%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRK---GVKASQGAGHLW--NLSDMEPVEDA 65
             F +E FPY+    D WKNSVRHNLS+N  F K      +S   G LW  N + ++ +E+ 
Sbjct:    66 FMKEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKTSSSSRKGCLWALNPAKIDKMEEE 125

Query:    66 SKSNWVSIKVTGVKRT 81
              +  W    +  ++R+
Sbjct:   126 MQK-WKRKDLPAIRRS 140


>UNIPROTKB|F1NZP2 [details] [associations]
            symbol:Gga.51501 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0001077 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=IEA] [GO:0001503
            "ossification" evidence=IEA] [GO:0001569 "patterning of blood
            vessels" evidence=IEA] [GO:0001656 "metanephros development"
            evidence=IEA] [GO:0001657 "ureteric bud development" evidence=IEA]
            [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001946
            "lymphangiogenesis" evidence=IEA] [GO:0001974 "blood vessel
            remodeling" evidence=IEA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0008286
            "insulin receptor signaling pathway" evidence=IEA] [GO:0014032
            "neural crest cell development" evidence=IEA] [GO:0030199 "collagen
            fibril organization" evidence=IEA] [GO:0031490 "chromatin DNA
            binding" evidence=IEA] [GO:0033630 "positive regulation of cell
            adhesion mediated by integrin" evidence=IEA] [GO:0035050 "embryonic
            heart tube development" evidence=IEA] [GO:0035470 "positive
            regulation of vascular wound healing" evidence=IEA] [GO:0043010
            "camera-type eye development" evidence=IEA] [GO:0043066 "negative
            regulation of apoptotic process" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0046620 "regulation of organ growth" evidence=IEA] [GO:0048010
            "vascular endothelial growth factor receptor signaling pathway"
            evidence=IEA] [GO:0048343 "paraxial mesodermal cell fate
            commitment" evidence=IEA] [GO:0048703 "embryonic viscerocranium
            morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
            evidence=IEA] [GO:0050880 "regulation of blood vessel size"
            evidence=IEA] [GO:0055010 "ventricular cardiac muscle tissue
            morphogenesis" evidence=IEA] [GO:0060038 "cardiac muscle cell
            proliferation" evidence=IEA] [GO:0072011 "glomerular endothelium
            development" evidence=IEA] [GO:0072112 "glomerular visceral
            epithelial cell differentiation" evidence=IEA] [GO:0072144
            "glomerular mesangial cell development" evidence=IEA] [GO:0090050
            "positive regulation of cell migration involved in sprouting
            angiogenesis" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0008286 GO:GO:0008283 GO:GO:0043565
            GO:GO:0030199 GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0003705 GO:GO:0001077 GO:GO:0000122 GO:GO:0044212
            GO:GO:0033630 GO:GO:0031490 GO:GO:0046620 GO:GO:0048010
            GeneTree:ENSGT00690000101636 GO:GO:0090050 GO:GO:0035470
            EMBL:AADN02042527 EMBL:AADN02064686 EMBL:AADN02064687
            IPI:IPI00820573 Ensembl:ENSGALT00000020637 ArrayExpress:F1NZP2
            Uniprot:F1NZP2
        Length = 60

 Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 21/48 (43%), Positives = 29/48 (60%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  +RFP+Y +N   W+NS+RHNLS+N  F K  +  +  G G  W L
Sbjct:     4 FIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 51


>UNIPROTKB|F1NXR9 [details] [associations]
            symbol:FOXE3 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0043010 "camera-type eye development"
            evidence=IEA] [GO:0048468 "cell development" evidence=IEA]
            [GO:0050679 "positive regulation of epithelial cell proliferation"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GeneTree:ENSGT00700000104135 EMBL:AADN02012627
            IPI:IPI00573520 Ensembl:ENSGALT00000038314 Uniprot:F1NXR9
        Length = 226

 Score = 113 (44.8 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 21/48 (43%), Positives = 30/48 (62%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
             F  ERFP+Y +N  +W+NS+RHNL++N  F K  +     G G+ W L
Sbjct:     8 FITERFPFYRENPKKWQNSIRHNLTLNDCFVKIPREPGHPGKGNYWTL 55


>UNIPROTKB|Q70VZ3 [details] [associations]
            symbol:foxE "Uncharacterized protein" species:7719 "Ciona
            intestinalis" [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0016477 "cell
            migration" evidence=IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048484 "enteric nervous system development" evidence=IBA]
            [GO:0048485 "sympathetic nervous system development" evidence=IBA]
            [GO:0048562 "embryonic organ morphogenesis" evidence=IBA]
            [GO:0048937 "lateral line nerve glial cell development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0048846
            "axon extension involved in axon guidance" evidence=IRD]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0016477 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0048485 GO:GO:0048484 GO:GO:0051090 GO:GO:0009888
            GeneTree:ENSGT00700000104135 GO:GO:0048937 GO:GO:0048562
            HSSP:Q01167 EMBL:EAAA01002052 EMBL:AJ534401 RefSeq:NP_001027947.1
            UniGene:Cin.14354 SMR:Q70VZ3 Ensembl:ENSCINT00000015355
            GeneID:445746 KEGG:cin:445746 CTD:445746 HOGENOM:HOG000169920
            HOVERGEN:HBG065789 InParanoid:Q70VZ3 Uniprot:Q70VZ3
        Length = 721

 Score = 110 (43.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
 Identities = 20/48 (41%), Positives = 30/48 (62%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
             F  ERFP+Y + + +W+NS+RHNL++N  F K  +     G G+ W L
Sbjct:   380 FIMERFPFYREQNKKWQNSIRHNLTLNDCFIKLPREPGKPGKGNYWTL 427

 Score = 34 (17.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query:    87 GYYSERPKYDMLNTSGVLRTCMCNSN 112
             G  SER   D   T+ V R+   N++
Sbjct:   565 GLNSERDLLDREGTNNVDRSLQANTS 590


>UNIPROTKB|Q9DGG2 [details] [associations]
            symbol:FOXK1 "Winged helix protein CWH-5" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0006357 "regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0030308
            "negative regulation of cell growth" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0045892 GO:GO:0045893 GO:GO:0005730
            GO:GO:0030308 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006357 GO:GO:0006351 eggNOG:COG5025
            HSSP:Q01167 GeneTree:ENSGT00700000104094 HOGENOM:HOG000072588
            EMBL:AADN02023808 OrthoDB:EOG4QRH3W HOVERGEN:HBG098671 EMBL:U37276
            IPI:IPI00818763 UniGene:Gga.11863 UniGene:Gga.51502
            Ensembl:ENSGALT00000040858 InParanoid:Q9DGG2 Uniprot:Q9DGG2
        Length = 108

 Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 23/63 (36%), Positives = 37/63 (58%)

Query:     9 LFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL---SDMEPV 62
             ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +   S+ + V
Sbjct:    36 IYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLV 95

Query:    63 EDA 65
             E A
Sbjct:    96 EQA 98


>ZFIN|ZDB-GENE-990415-76 [details] [associations]
            symbol:foxa "forkhead box A sequence" species:7955
            "Danio rerio" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0019904 "protein domain specific binding" evidence=IBA]
            [GO:0060441 "epithelial tube branching involved in lung
            morphogenesis" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0009790
            "embryo development" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0010817 "regulation of
            hormone levels" evidence=IBA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0048665 "neuron fate specification"
            evidence=IBA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0042593 "glucose homeostasis" evidence=IBA] [GO:0060487 "lung
            epithelial cell differentiation" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-990415-76 GO:GO:0019904 GO:GO:0043565 GO:GO:0045944
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0042593 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0045666 GO:GO:0008134 GO:GO:0007389 GO:GO:0060487
            GO:GO:0048665 GO:GO:0051090 GO:GO:0010817 GO:GO:0060441
            eggNOG:COG5025 HSSP:Q99958 HOGENOM:HOG000231817 CTD:30539
            EMBL:AF052247 IPI:IPI00631514 RefSeq:NP_571357.1 UniGene:Dr.75815
            ProteinModelPortal:O73780 SMR:O73780 STRING:O73780 GeneID:30539
            KEGG:dre:30539 HOVERGEN:HBG108363 NextBio:20806920
            ArrayExpress:O73780 Uniprot:O73780
        Length = 343

 Score = 116 (45.9 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 25/56 (44%), Positives = 33/56 (58%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNL 56
             LT N    + R+ FPYY QN  RW+NS+RH+LS N  F +  ++  S G G  W L
Sbjct:   110 LTLNEIYDWIRQLFPYYRQNQQRWQNSIRHSLSFNDCFVRVPRSPDSPGKGSYWAL 165


>UNIPROTKB|I3LIV8 [details] [associations]
            symbol:FOXB1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0061381 "cell migration in diencephalon" evidence=IEA]
            [GO:0061379 "inferior colliculus development" evidence=IEA]
            [GO:0061374 "mammillothalamic axonal tract development"
            evidence=IEA] [GO:0061030 "epithelial cell differentiation involved
            in mammary gland alveolus development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0043524 "negative
            regulation of neuron apoptotic process" evidence=IEA] [GO:0033504
            "floor plate development" evidence=IEA] [GO:0022029 "telencephalon
            cell migration" evidence=IEA] [GO:0021855 "hypothalamus cell
            migration" evidence=IEA] [GO:0021794 "thalamus development"
            evidence=IEA] [GO:0021510 "spinal cord development" evidence=IEA]
            [GO:0008542 "visual learning" evidence=IEA] [GO:0007595 "lactation"
            evidence=IEA] [GO:0007412 "axon target recognition" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0001756 "somitogenesis"
            evidence=IEA] [GO:0001655 "urogenital system development"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0043565
            GO:GO:0008542 GO:GO:0043524 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0001756 GO:GO:0001655
            GO:GO:0021510 GO:GO:0007595 GO:GO:0007412 GO:GO:0033504
            GO:GO:0021794 GO:GO:0022029 GeneTree:ENSGT00700000104135
            OMA:AREYKVP GO:GO:0061381 GO:GO:0061030 GO:GO:0021855 GO:GO:0061379
            GO:GO:0061374 Ensembl:ENSSSCT00000024793 Uniprot:I3LIV8
        Length = 273

 Score = 114 (45.2 bits), Expect = 2.2e-06, P = 2.2e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  +RFPYY +N  RW+NS+RHNLS N  F K  +     G G  W L
Sbjct:    35 FIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 82


>ZFIN|ZDB-GENE-040426-1181 [details] [associations]
            symbol:foxl1 "forkhead box L1" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;IDA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0009887 "organ
            morphogenesis" evidence=IBA] [GO:0030166 "proteoglycan biosynthetic
            process" evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0030111 "regulation of
            Wnt receptor signaling pathway" evidence=IBA] [GO:0007495 "visceral
            mesoderm-endoderm interaction involved in midgut development"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0007420 "brain development"
            evidence=IMP] [GO:0043010 "camera-type eye development"
            evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
            [GO:0035138 "pectoral fin morphogenesis" evidence=IMP] [GO:0005634
            "nucleus" evidence=IEA;IC] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 ZFIN:ZDB-GENE-040426-1181
            GO:GO:0045892 GO:GO:0007420 GO:GO:0030111 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0043010 GO:GO:0009790 GO:GO:0009887
            GO:GO:0003690 GO:GO:0051216 GO:GO:0008134 GO:GO:0007389
            GO:GO:0051090 GO:GO:0030166 HSSP:Q99958 CTD:2300
            HOGENOM:HOG000112632 HOVERGEN:HBG051650 KO:K09405 GO:GO:0007495
            GO:GO:0035138 EMBL:BC055156 IPI:IPI00495121 RefSeq:NP_957278.1
            UniGene:Dr.15390 ProteinModelPortal:Q7SY22 SMR:Q7SY22 STRING:Q7SY22
            GeneID:393959 KEGG:dre:393959 InParanoid:Q7SY22 NextBio:20814930
            ArrayExpress:Q7SY22 Bgee:Q7SY22 Uniprot:Q7SY22
        Length = 363

 Score = 116 (45.9 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRK--GVKASQGAGHLWNL 56
             F  +RFPYY+ N   W+NS+RHNLS+N  F K    K   G G  W L
Sbjct:    81 FIMDRFPYYHDNKQGWQNSIRHNLSLNDCFIKVPREKGRPGKGSYWTL 128


>UNIPROTKB|E2R919 [details] [associations]
            symbol:FOXN4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0048663 "neuron fate commitment"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0048663
            GeneTree:ENSGT00700000104051 OMA:QQMASGR EMBL:AAEX03014749
            EMBL:AAEX03014750 Ensembl:ENSCAFT00000017359 NextBio:20860106
            Uniprot:E2R919
        Length = 523

 Score = 118 (46.6 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 27/76 (35%), Positives = 40/76 (52%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA---GHLW--NLSDMEPVEDA 65
             F +E FPY+    D WKNSVRHNLS+N  F K      G+   G LW  N++ ++ +E+ 
Sbjct:   231 FMKEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKMSGSSRKGCLWALNVARIDKMEE- 289

Query:    66 SKSNWVSIKVTGVKRT 81
                 W    +  + R+
Sbjct:   290 EMHKWKRKDLAAIHRS 305


>ZFIN|ZDB-GENE-990616-47 [details] [associations]
            symbol:foxb1.2 "forkhead box B1.2" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0008301
            "DNA binding, bending" evidence=IBA] [GO:0003690 "double-stranded
            DNA binding" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0007420 "brain development" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0033504 "floor
            plate development" evidence=ISS] [GO:0061374 "mammillothalamic
            axonal tract development" evidence=ISS] [GO:0061379 "inferior
            colliculus development" evidence=ISS] [GO:0008542 "visual learning"
            evidence=ISS] [GO:0007412 "axon target recognition" evidence=ISS]
            [GO:0001756 "somitogenesis" evidence=ISS] [GO:0005634 "nucleus"
            evidence=IEA;ISS] [GO:0043524 "negative regulation of neuron
            apoptotic process" evidence=ISS] [GO:0061381 "cell migration in
            diencephalon" evidence=ISS] [GO:0021855 "hypothalamus cell
            migration" evidence=ISS] [GO:0022029 "telencephalon cell migration"
            evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-990616-47 GO:GO:0043565 GO:GO:0008542 GO:GO:0043524
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0001756 GO:GO:0003690 GO:GO:0008134
            GO:GO:0051090 GO:GO:0007412 GO:GO:0033504 eggNOG:COG5025
            GO:GO:0009888 GO:GO:0022029 GeneTree:ENSGT00700000104135
            HOGENOM:HOG000007545 HOVERGEN:HBG102104 KO:K09395 OMA:AREYKVP
            OrthoDB:EOG40GCRF GO:GO:0061381 GO:GO:0021855 GO:GO:0061379
            GO:GO:0061374 HSSP:Q63245 EMBL:CU462819 EMBL:CU929228 EMBL:AF052246
            EMBL:BC056754 EMBL:BC066395 IPI:IPI00513060 RefSeq:NP_571360.1
            RefSeq:XP_003201510.1 RefSeq:XP_003201511.1 UniGene:Dr.75814
            SMR:O73779 STRING:O73779 Ensembl:ENSDART00000125036
            Ensembl:ENSDART00000128240 GeneID:100535158 GeneID:30542
            KEGG:dre:100535158 KEGG:dre:30542 CTD:30542 InParanoid:O73779
            NextBio:20806922 Uniprot:O73779
        Length = 297

 Score = 114 (45.2 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  +RFPYY +N  RW+NS+RHNLS N  F K  +     G G  W L
Sbjct:    42 FIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>ZFIN|ZDB-GENE-990415-77 [details] [associations]
            symbol:foxb1.1 "forkhead box B1.1" species:7955
            "Danio rerio" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0009888
            "tissue development" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0007420 "brain development" evidence=IEP]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 ZFIN:ZDB-GENE-990415-77 GO:GO:0007420 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 GO:GO:0009888 HOGENOM:HOG000007545
            HOVERGEN:HBG102104 HSSP:Q63245 EMBL:AF052248 IPI:IPI00487571
            RefSeq:NP_571358.1 UniGene:Dr.589 ProteinModelPortal:O73781
            SMR:O73781 GeneID:799571 KEGG:dre:799571 CTD:799571
            InParanoid:O73781 NextBio:20933880 ArrayExpress:O73781
            Uniprot:O73781
        Length = 299

 Score = 114 (45.2 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  +RFPYY +N  RW+NS+RHNLS N  F K  +     G G  W L
Sbjct:    42 FIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>UNIPROTKB|F1NNW9 [details] [associations]
            symbol:F1NNW9 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00700000104094
            OMA:FATGCES EMBL:AADN02023892 IPI:IPI00818635
            Ensembl:ENSGALT00000041045 Uniprot:F1NNW9
        Length = 152

 Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 20/50 (40%), Positives = 30/50 (60%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKAS---QGAGHLWNLS 57
             F  ++FPYY  N   W+NS+RHNLS+N  F K  +     +G G+ W+ +
Sbjct:    81 FIMKKFPYYRSNQRAWQNSIRHNLSLNSCFVKVPRTEGNEKGKGNYWSFA 130


>ZFIN|ZDB-GENE-990415-277 [details] [associations]
            symbol:foxn4 "forkhead box N4" species:7955 "Danio
            rerio" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA;IDA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA;IDA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0048513 "organ development" evidence=IBA]
            [GO:0048675 "axon extension" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008016 "regulation of heart
            contraction" evidence=IMP] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-990415-277 GO:GO:0045893 GO:GO:0043565 GO:GO:0008016
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 GO:GO:0048513 GO:GO:0048675
            GO:GO:0009888 HSSP:Q63244 HOVERGEN:HBG051655 EMBL:AJ252024
            IPI:IPI00482255 UniGene:Dr.81266 ProteinModelPortal:Q9PT94
            InParanoid:Q9PT94 ArrayExpress:Q9PT94 Uniprot:Q9PT94
        Length = 550

 Score = 118 (46.6 bits), Expect = 2.7e-06, P = 2.7e-06
 Identities = 27/76 (35%), Positives = 41/76 (53%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA---GHLW--NLSDMEPVEDA 65
             F +E FPY+    D WKNSVRHNLS+N  F K      G+   G LW  N + ++ +E+ 
Sbjct:   260 FMKEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKMSGSSRKGCLWALNPAKIDKMEEE 319

Query:    66 SKSNWVSIKVTGVKRT 81
              +  W    +  ++R+
Sbjct:   320 MQK-WKRKDLPAIRRS 334


>UNIPROTKB|C1K2Y2 [details] [associations]
            symbol:Ola.4950 "Forkhead box B1.2" species:8090 "Oryzias
            latipes" [GO:0001756 "somitogenesis" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0007412 "axon target recognition"
            evidence=ISS] [GO:0008542 "visual learning" evidence=ISS]
            [GO:0021767 "mammillary body development" evidence=ISS] [GO:0021855
            "hypothalamus cell migration" evidence=ISS] [GO:0022029
            "telencephalon cell migration" evidence=ISS] [GO:0030901 "midbrain
            development" evidence=ISS] [GO:0033504 "floor plate development"
            evidence=ISS] [GO:0043524 "negative regulation of neuron apoptotic
            process" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0061374 "mammillothalamic axonal tract
            development" evidence=ISS] [GO:0061379 "inferior colliculus
            development" evidence=ISS] [GO:0061381 "cell migration in
            diencephalon" evidence=ISS] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0043565
            GO:GO:0008542 GO:GO:0043524 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0001756 GO:GO:0007412
            GO:GO:0033504 eggNOG:COG5025 GO:GO:0022029
            GeneTree:ENSGT00700000104135 OMA:AREYKVP OrthoDB:EOG40GCRF
            GO:GO:0061381 GO:GO:0021855 GO:GO:0061379 GO:GO:0061374
            EMBL:FJ792650 RefSeq:NP_001153921.1 UniGene:Ola.4950
            Ensembl:ENSORLT00000009495 GeneID:100301603 Uniprot:C1K2Y2
        Length = 313

 Score = 114 (45.2 bits), Expect = 2.9e-06, P = 2.9e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  +RFPYY +N  RW+NS+RHNLS N  F K  +     G G  W L
Sbjct:    42 FIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>UNIPROTKB|Q4SM19 [details] [associations]
            symbol:FOXB1 "Uncharacterized protein" species:99883
            "Tetraodon nigroviridis" [GO:0001756 "somitogenesis" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0007412 "axon target
            recognition" evidence=ISS] [GO:0008542 "visual learning"
            evidence=ISS] [GO:0021767 "mammillary body development"
            evidence=ISS] [GO:0021855 "hypothalamus cell migration"
            evidence=ISS] [GO:0022029 "telencephalon cell migration"
            evidence=ISS] [GO:0030901 "midbrain development" evidence=ISS]
            [GO:0033504 "floor plate development" evidence=ISS] [GO:0043524
            "negative regulation of neuron apoptotic process" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0061374 "mammillothalamic axonal tract development"
            evidence=ISS] [GO:0061379 "inferior colliculus development"
            evidence=ISS] [GO:0061381 "cell migration in diencephalon"
            evidence=ISS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0008542
            GO:GO:0043524 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0001756 GO:GO:0007412 GO:GO:0033504
            GO:GO:0022029 GeneTree:ENSGT00700000104135 OMA:AREYKVP
            OrthoDB:EOG40GCRF GO:GO:0061381 GO:GO:0021855 GO:GO:0061379
            GO:GO:0061374 HOVERGEN:HBG051642 EMBL:CAAE01014555
            Ensembl:ENSTNIT00000011410 Uniprot:Q4SM19
        Length = 313

 Score = 114 (45.2 bits), Expect = 2.9e-06, P = 2.9e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  +RFPYY +N  RW+NS+RHNLS N  F K  +     G G  W L
Sbjct:    42 FIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>UNIPROTKB|Q8JIT6 [details] [associations]
            symbol:foxb2 "Forkhead box protein B2" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            HOVERGEN:HBG102104 KO:K09395 HSSP:Q63245 CTD:442425 EMBL:AJ487619
            PIR:F56556 RefSeq:NP_001165547.1 UniGene:Xl.85731
            ProteinModelPortal:Q8JIT6 SMR:Q8JIT6 GeneID:100337555
            KEGG:xla:100337555 Xenbase:XB-GENE-1021720 Uniprot:Q8JIT6
        Length = 317

 Score = 114 (45.2 bits), Expect = 3.0e-06, P = 3.0e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  +RFPYY +N  RW+NS+RHNLS N  F K  +     G G  W L
Sbjct:    42 FIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>ZFIN|ZDB-GENE-081104-320 [details] [associations]
            symbol:foxb2 "forkhead box B2" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-081104-320 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104135 KO:K09395 OMA:CHSASQS EMBL:BX571947
            IPI:IPI00634411 RefSeq:XP_688171.1 Ensembl:ENSDART00000054558
            GeneID:559714 KEGG:dre:559714 NextBio:20883097 Uniprot:E7F6A0
        Length = 318

 Score = 114 (45.2 bits), Expect = 3.0e-06, P = 3.0e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  +RFPYY +N  RW+NS+RHNLS N  F K  +     G G  W L
Sbjct:    42 FIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>UNIPROTKB|O93529 [details] [associations]
            symbol:foxb1 "Forkhead box protein B1" species:8355
            "Xenopus laevis" [GO:0001756 "somitogenesis" evidence=ISS]
            [GO:0003677 "DNA binding" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0007398 "ectoderm development" evidence=IEP] [GO:0007412 "axon
            target recognition" evidence=ISS] [GO:0008542 "visual learning"
            evidence=ISS] [GO:0021767 "mammillary body development"
            evidence=ISS] [GO:0021855 "hypothalamus cell migration"
            evidence=ISS] [GO:0022008 "neurogenesis" evidence=IEP] [GO:0022029
            "telencephalon cell migration" evidence=ISS] [GO:0030901 "midbrain
            development" evidence=ISS] [GO:0033504 "floor plate development"
            evidence=ISS] [GO:0043524 "negative regulation of neuron apoptotic
            process" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0061374 "mammillothalamic axonal tract
            development" evidence=ISS] [GO:0061379 "inferior colliculus
            development" evidence=ISS] [GO:0061381 "cell migration in
            diencephalon" evidence=ISS] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0043565
            GO:GO:0008542 GO:GO:0043524 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0001756 GO:GO:0007398
            GO:GO:0007412 GO:GO:0033504 GO:GO:0022029 CTD:27023
            HOVERGEN:HBG102104 KO:K09395 GO:GO:0061381 GO:GO:0021855
            GO:GO:0061379 GO:GO:0061374 EMBL:AF064810 EMBL:BC124883
            RefSeq:NP_001081836.1 UniGene:Xl.403 HSSP:Q63245
            ProteinModelPortal:O93529 SMR:O93529 PRIDE:O93529 GeneID:398078
            KEGG:xla:398078 Xenbase:XB-GENE-1018260 Uniprot:O93529
        Length = 319

 Score = 114 (45.2 bits), Expect = 3.0e-06, P = 3.0e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  +RFPYY +N  RW+NS+RHNLS N  F K  +     G G  W L
Sbjct:    42 FIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>UNIPROTKB|B0JZ54 [details] [associations]
            symbol:foxb1 "Uncharacterized protein" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0001756 "somitogenesis"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0007412 "axon
            target recognition" evidence=ISS] [GO:0008542 "visual learning"
            evidence=ISS] [GO:0021767 "mammillary body development"
            evidence=ISS] [GO:0021855 "hypothalamus cell migration"
            evidence=ISS] [GO:0022029 "telencephalon cell migration"
            evidence=ISS] [GO:0030901 "midbrain development" evidence=ISS]
            [GO:0033504 "floor plate development" evidence=ISS] [GO:0043524
            "negative regulation of neuron apoptotic process" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0061374 "mammillothalamic axonal tract development"
            evidence=ISS] [GO:0061379 "inferior colliculus development"
            evidence=ISS] [GO:0061381 "cell migration in diencephalon"
            evidence=ISS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0008542
            GO:GO:0043524 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0001756 GO:GO:0007412 GO:GO:0033504
            eggNOG:COG5025 GO:GO:0022029 GeneTree:ENSGT00700000104135 CTD:27023
            HOGENOM:HOG000007545 HOVERGEN:HBG102104 KO:K09395 OrthoDB:EOG40GCRF
            GO:GO:0061381 GO:GO:0021855 GO:GO:0061379 GO:GO:0061374
            EMBL:AAMC01074439 EMBL:BC159040 RefSeq:NP_001107970.1
            UniGene:Str.52842 SMR:B0JZ54 Ensembl:ENSXETT00000038420
            GeneID:100125219 KEGG:xtr:100125219 Xenbase:XB-GENE-1018255
            OMA:PHMYSSS Uniprot:B0JZ54
        Length = 322

 Score = 114 (45.2 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  +RFPYY +N  RW+NS+RHNLS N  F K  +     G G  W L
Sbjct:    42 FIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>UNIPROTKB|E1BK17 [details] [associations]
            symbol:FOXJ3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00700000104094
            OMA:MSQQHMM EMBL:DAAA02009082 EMBL:DAAA02009083 IPI:IPI00924244
            Ensembl:ENSBTAT00000060940 Uniprot:E1BK17
        Length = 610

 Score = 118 (46.6 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 24/54 (44%), Positives = 31/54 (57%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNLSDMEPVEDA 65
             + FPYY +    WKNS+RHNLS+N  F K  ++    G G  W + D  P EDA
Sbjct:    95 DNFPYYREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAI-DTNPKEDA 147


>UNIPROTKB|E1B7H0 [details] [associations]
            symbol:FOXB1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0061381 "cell migration in diencephalon" evidence=ISS]
            [GO:0061379 "inferior colliculus development" evidence=ISS]
            [GO:0061377 "mammary gland lobule development" evidence=ISS]
            [GO:0061374 "mammillothalamic axonal tract development"
            evidence=ISS] [GO:0021767 "mammillary body development"
            evidence=ISS] [GO:0008542 "visual learning" evidence=ISS]
            [GO:0022029 "telencephalon cell migration" evidence=ISS]
            [GO:0001756 "somitogenesis" evidence=ISS] [GO:0033504 "floor plate
            development" evidence=ISS] [GO:0021855 "hypothalamus cell
            migration" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0061030 "epithelial cell differentiation involved in mammary
            gland alveolus development" evidence=ISS] [GO:0043524 "negative
            regulation of neuron apoptotic process" evidence=ISS] [GO:0030901
            "midbrain development" evidence=ISS] [GO:0007595 "lactation"
            evidence=ISS] [GO:0007412 "axon target recognition" evidence=ISS]
            [GO:0021794 "thalamus development" evidence=IEA] [GO:0021510
            "spinal cord development" evidence=IEA] [GO:0001655 "urogenital
            system development" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0008542 GO:GO:0043524
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0001756 GO:GO:0001655 GO:GO:0021510 GO:GO:0007595
            GO:GO:0007412 GO:GO:0033504 GO:GO:0021794 GO:GO:0022029
            GeneTree:ENSGT00700000104135 CTD:27023 KO:K09395 OMA:AREYKVP
            GO:GO:0061381 GO:GO:0061030 GO:GO:0021855 GO:GO:0061379
            GO:GO:0061374 EMBL:DAAA02028794 IPI:IPI00686566
            RefSeq:XP_002690896.1 RefSeq:XP_585450.1 Ensembl:ENSBTAT00000025445
            GeneID:539181 KEGG:bta:539181 NextBio:20877831 Uniprot:E1B7H0
        Length = 325

 Score = 114 (45.2 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  +RFPYY +N  RW+NS+RHNLS N  F K  +     G G  W L
Sbjct:    42 FIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>UNIPROTKB|E2R277 [details] [associations]
            symbol:FOXB1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104135 CTD:27023 KO:K09395 OMA:AREYKVP
            EMBL:AAEX03016181 RefSeq:XP_003433969.1 ProteinModelPortal:E2R277
            Ensembl:ENSCAFT00000039029 GeneID:100685913 KEGG:cfa:100685913
            Uniprot:E2R277
        Length = 325

 Score = 114 (45.2 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  +RFPYY +N  RW+NS+RHNLS N  F K  +     G G  W L
Sbjct:    42 FIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>UNIPROTKB|Q99853 [details] [associations]
            symbol:FOXB1 "Forkhead box protein B1" species:9606 "Homo
            sapiens" [GO:0001655 "urogenital system development" evidence=IEA]
            [GO:0021510 "spinal cord development" evidence=IEA] [GO:0021794
            "thalamus development" evidence=IEA] [GO:0003690 "double-stranded
            DNA binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007420 "brain development" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0009790
            "embryo development" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0007412
            "axon target recognition" evidence=ISS] [GO:0007595 "lactation"
            evidence=ISS] [GO:0030901 "midbrain development" evidence=ISS]
            [GO:0043524 "negative regulation of neuron apoptotic process"
            evidence=ISS] [GO:0061030 "epithelial cell differentiation involved
            in mammary gland alveolus development" evidence=ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0021855 "hypothalamus cell migration"
            evidence=ISS] [GO:0033504 "floor plate development" evidence=ISS]
            [GO:0001756 "somitogenesis" evidence=ISS] [GO:0022029
            "telencephalon cell migration" evidence=ISS] [GO:0008542 "visual
            learning" evidence=ISS] [GO:0021767 "mammillary body development"
            evidence=ISS] [GO:0061374 "mammillothalamic axonal tract
            development" evidence=ISS] [GO:0061377 "mammary gland lobule
            development" evidence=ISS] [GO:0061379 "inferior colliculus
            development" evidence=ISS] [GO:0061381 "cell migration in
            diencephalon" evidence=ISS] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 EMBL:AF071554 GO:GO:0043565
            GO:GO:0008542 GO:GO:0043524 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0001756
            GO:GO:0001655 GO:GO:0003690 GO:GO:0008134 GO:GO:0021510
            EMBL:CH471082 GO:GO:0007595 GO:GO:0051090 GO:GO:0007412
            GO:GO:0033504 GO:GO:0021794 eggNOG:COG5025 GO:GO:0022029
            EMBL:AF055080 EMBL:AK290944 EMBL:BC113710 EMBL:U87393
            IPI:IPI00018495 RefSeq:NP_036314.2 UniGene:Hs.734475
            ProteinModelPortal:Q99853 SMR:Q99853 IntAct:Q99853 STRING:Q99853
            PhosphoSite:Q99853 DMDM:215274160 PRIDE:Q99853
            Ensembl:ENST00000396057 GeneID:27023 KEGG:hsa:27023 UCSC:uc002agj.1
            CTD:27023 GeneCards:GC15P060296 HGNC:HGNC:3799 neXtProt:NX_Q99853
            PharmGKB:PA28216 HOGENOM:HOG000007545 HOVERGEN:HBG102104
            InParanoid:Q99853 KO:K09395 OMA:AREYKVP OrthoDB:EOG40GCRF
            PhylomeDB:Q99853 GenomeRNAi:27023 NextBio:49554 Bgee:Q99853
            CleanEx:HS_FOXB1 Genevestigator:Q99853 GermOnline:ENSG00000171956
            GO:GO:0061381 GO:GO:0061030 GO:GO:0021855 GO:GO:0061379
            GO:GO:0061374 Uniprot:Q99853
        Length = 325

 Score = 114 (45.2 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  +RFPYY +N  RW+NS+RHNLS N  F K  +     G G  W L
Sbjct:    42 FIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>UNIPROTKB|D2HLR1 [details] [associations]
            symbol:FOXB1 "Uncharacterized protein" species:9646
            "Ailuropoda melanoleuca" [GO:0001756 "somitogenesis" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0007412 "axon target
            recognition" evidence=ISS] [GO:0007595 "lactation" evidence=ISS]
            [GO:0008542 "visual learning" evidence=ISS] [GO:0021767 "mammillary
            body development" evidence=ISS] [GO:0021855 "hypothalamus cell
            migration" evidence=ISS] [GO:0022029 "telencephalon cell migration"
            evidence=ISS] [GO:0030901 "midbrain development" evidence=ISS]
            [GO:0033504 "floor plate development" evidence=ISS] [GO:0043524
            "negative regulation of neuron apoptotic process" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0061030 "epithelial cell differentiation involved in mammary
            gland alveolus development" evidence=ISS] [GO:0061374
            "mammillothalamic axonal tract development" evidence=ISS]
            [GO:0061377 "mammary gland lobule development" evidence=ISS]
            [GO:0061379 "inferior colliculus development" evidence=ISS]
            [GO:0061381 "cell migration in diencephalon" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0008542 GO:GO:0043524
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0001756 GO:GO:0001655 GO:GO:0021510 GO:GO:0007595
            GO:GO:0007412 GO:GO:0033504 GO:GO:0021794 GO:GO:0022029
            GeneTree:ENSGT00700000104135 HOGENOM:HOG000007545 KO:K09395
            OMA:AREYKVP GO:GO:0061381 GO:GO:0061030 GO:GO:0021855 GO:GO:0061379
            GO:GO:0061374 EMBL:ACTA01179549 EMBL:GL193015 RefSeq:XP_002923327.1
            ProteinModelPortal:D2HLR1 Ensembl:ENSAMET00000021309
            GeneID:100475733 KEGG:aml:100475733 Uniprot:D2HLR1
        Length = 325

 Score = 114 (45.2 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  +RFPYY +N  RW+NS+RHNLS N  F K  +     G G  W L
Sbjct:    42 FIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>MGI|MGI:1927549 [details] [associations]
            symbol:Foxb1 "forkhead box B1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001756 "somitogenesis"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007412 "axon target recognition" evidence=IMP] [GO:0007595
            "lactation" evidence=IMP] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0008542 "visual learning" evidence=IMP]
            [GO:0021767 "mammillary body development" evidence=IMP] [GO:0021855
            "hypothalamus cell migration" evidence=IMP] [GO:0022029
            "telencephalon cell migration" evidence=IMP] [GO:0030901 "midbrain
            development" evidence=IMP] [GO:0033504 "floor plate development"
            evidence=IMP] [GO:0043524 "negative regulation of neuron apoptotic
            process" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0061030
            "epithelial cell differentiation involved in mammary gland alveolus
            development" evidence=IMP] [GO:0061374 "mammillothalamic axonal
            tract development" evidence=IMP] [GO:0061377 "mammary gland lobule
            development" evidence=IMP] [GO:0061379 "inferior colliculus
            development" evidence=IMP] [GO:0061381 "cell migration in
            diencephalon" evidence=IMP] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 EMBL:U90538 MGI:MGI:1927549
            GO:GO:0043565 GO:GO:0008542 GO:GO:0043524 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0000122
            GO:GO:0008301 GO:GO:0001756 GO:GO:0001655 GO:GO:0003690
            GO:GO:0008134 GO:GO:0021510 GO:GO:0007595 GO:GO:0051090
            GO:GO:0007412 GO:GO:0033504 GO:GO:0021794 eggNOG:COG5025
            GO:GO:0022029 GeneTree:ENSGT00700000104135 CTD:27023
            HOGENOM:HOG000007545 HOVERGEN:HBG102104 KO:K09395 OMA:AREYKVP
            OrthoDB:EOG40GCRF GO:GO:0061381 GO:GO:0061030 GO:GO:0021855
            GO:GO:0061379 GO:GO:0061374 EMBL:X92592 EMBL:BC111908 EMBL:U04198
            EMBL:X71943 IPI:IPI00138059 PIR:E47746 RefSeq:NP_071773.2
            UniGene:Mm.440890 ProteinModelPortal:Q64732 SMR:Q64732
            PhosphoSite:Q64732 PRIDE:Q64732 Ensembl:ENSMUST00000071281
            GeneID:64290 KEGG:mmu:64290 UCSC:uc012gwj.1 InParanoid:Q2M2M4
            NextBio:319993 Bgee:Q64732 CleanEx:MM_FOXB1 Genevestigator:Q64732
            GermOnline:ENSMUSG00000059246 Uniprot:Q64732
        Length = 325

 Score = 114 (45.2 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  +RFPYY +N  RW+NS+RHNLS N  F K  +     G G  W L
Sbjct:    42 FIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>UNIPROTKB|E2R0F1 [details] [associations]
            symbol:FOXJ3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104094 OMA:MSQQHMM EMBL:AAEX03009529
            EMBL:AAEX03009528 ProteinModelPortal:E2R0F1
            Ensembl:ENSCAFT00000004039 Uniprot:E2R0F1
        Length = 622

 Score = 118 (46.6 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 24/54 (44%), Positives = 31/54 (57%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNLSDMEPVEDA 65
             + FPYY +    WKNS+RHNLS+N  F K  ++    G G  W + D  P EDA
Sbjct:   110 DNFPYYREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAI-DTNPKEDA 162


>UNIPROTKB|E1B8C0 [details] [associations]
            symbol:FOXJ2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0045893 GO:GO:0005730 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104094 CTD:55810 KO:K09403 OMA:DLSQDSP
            EMBL:DAAA02014401 IPI:IPI00705439 RefSeq:NP_001179699.1
            UniGene:Bt.103061 Ensembl:ENSBTAT00000026309 GeneID:540703
            KEGG:bta:540703 NextBio:20878784 Uniprot:E1B8C0
        Length = 560

 Score = 103 (41.3 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
 Identities = 20/45 (44%), Positives = 25/45 (55%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             + FPYY      WKNS+RHNLS+N  FRK  +     G G  W +
Sbjct:    98 DNFPYYKNAGIGWKNSIRHNLSLNKCFRKVPRPRDDPGKGSYWTI 142

 Score = 36 (17.7 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query:    55 NLSDMEPVEDASKS 68
             +LS   P +DASKS
Sbjct:   159 DLSQDSPEQDASKS 172


>UNIPROTKB|Q2V894 [details] [associations]
            symbol:FoxJ2 "Forkhead transcription factor J2"
            species:7668 "Strongylocentrotus purpuratus" [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0019904 "protein
            domain specific binding" evidence=IBA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IBA]
            [GO:0048513 "organ development" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0019904 GO:GO:0045893
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 GO:GO:0051090 GO:GO:0048513
            eggNOG:COG5025 GO:GO:0009888 CTD:55810 KO:K09403 EMBL:DQ286737
            RefSeq:NP_001073017.1 UniGene:Spu.15552 ProteinModelPortal:Q2V894
            SMR:Q2V894 GeneID:587514 KEGG:spu:587514 Uniprot:Q2V894
        Length = 483

 Score = 116 (45.9 bits), Expect = 3.7e-06, P = 3.7e-06
 Identities = 23/54 (42%), Positives = 32/54 (59%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNLSDMEPVEDA 65
             E FPYY +  + WKNS+RHNLS+N  F K  ++    G G  W + D  P +D+
Sbjct:    95 ENFPYYREAGNGWKNSIRHNLSLNKCFMKVPRSKDDPGKGSYWAI-DNNPQDDS 147


>UNIPROTKB|E1BCB1 [details] [associations]
            symbol:FOXB2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00700000104135
            OMA:CHSASQS EMBL:DAAA02022952 EMBL:DAAA02022953 IPI:IPI00838754
            Ensembl:ENSBTAT00000046825 Uniprot:E1BCB1
        Length = 275

 Score = 112 (44.5 bits), Expect = 3.7e-06, P = 3.7e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  ERFPYY ++  RW+NS+RHNLS N  F K  +     G G  W L
Sbjct:    42 FIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>UNIPROTKB|E1BTF1 [details] [associations]
            symbol:FOXL1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00690000101636
            EMBL:AADN02064408 IPI:IPI00814490 Ensembl:ENSGALT00000039026
            Uniprot:E1BTF1
        Length = 278

 Score = 112 (44.5 bits), Expect = 3.8e-06, P = 3.8e-06
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRK--GVKASQGAGHLWNL 56
             F  +RFP+Y+ N   W+NS+RHNLS+N  F K    K   G G  W L
Sbjct:    69 FIMDRFPFYHDNKQGWQNSIRHNLSLNDCFVKVPREKGRPGKGSYWTL 116


>UNIPROTKB|Q9PTK2 [details] [associations]
            symbol:foxe4 "Forkhead box protein E4" species:8355
            "Xenopus laevis" [GO:0002088 "lens development in camera-type eye"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0002088
            HSSP:Q63245 HOVERGEN:HBG051642 KO:K09398 CTD:2301 EMBL:AF186464
            RefSeq:NP_001079202.1 UniGene:Xl.593 ProteinModelPortal:Q9PTK2
            SMR:Q9PTK2 GeneID:373809 KEGG:xla:373809 Xenbase:XB-GENE-865391
            Uniprot:Q9PTK2
        Length = 365

 Score = 114 (45.2 bits), Expect = 3.9e-06, P = 3.9e-06
 Identities = 21/48 (43%), Positives = 30/48 (62%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
             F  ERFP+Y +N  +W+NS+RHNL++N  F K  +     G G+ W L
Sbjct:    77 FIMERFPFYRENSKKWQNSIRHNLTLNDCFVKIPREPGHPGKGNYWTL 124


>FB|FBgn0039937 [details] [associations]
            symbol:fd102C "forkhead domain 102C" species:7227 "Drosophila
            melanogaster" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0009790 "embryo
            development" evidence=IBA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0009888
            "tissue development" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 EMBL:AE014135 GO:GO:0051090 GO:GO:0009888 HSSP:Q63245
            GeneTree:ENSGT00700000104051 FlyBase:FBgn0039937 EMBL:BT022202
            RefSeq:NP_651951.1 UniGene:Dm.27993 SMR:Q9V481
            EnsemblMetazoa:FBtr0089251 GeneID:43843 KEGG:dme:Dmel_CG11152
            UCSC:CG11152-RA CTD:43843 InParanoid:Q9V481 OMA:QRIFQPE
            GenomeRNAi:43843 NextBio:836200 Uniprot:Q9V481
        Length = 599

 Score = 117 (46.2 bits), Expect = 3.9e-06, P = 3.9e-06
 Identities = 20/57 (35%), Positives = 33/57 (57%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGAGHLWNLSDMEPVEDASKSNW 70
             + +PY+      W+NS+RHNLS+N  F K  +++ G GH W +     +ED  K ++
Sbjct:   161 DNYPYFRSRGPGWRNSIRHNLSLNDCFIKSGRSANGKGHYWAIHPAN-MEDFRKGDF 216


>UNIPROTKB|E9PPI7 [details] [associations]
            symbol:FOXK2 "Forkhead box protein K2" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 EMBL:AC124287 HGNC:HGNC:6036
            ChiTaRS:FOXK2 EMBL:AC124283 IPI:IPI00982638 Ensembl:ENST00000526383
            ArrayExpress:E9PPI7 Bgee:E9PPI7 Uniprot:E9PPI7
        Length = 254

 Score = 111 (44.1 bits), Expect = 3.9e-06, P = 3.9e-06
 Identities = 25/69 (36%), Positives = 40/69 (57%)

Query:     3 LTANLRLFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL--- 56
             LT N  ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +   
Sbjct:   159 LTLN-GIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPA 217

Query:    57 SDMEPVEDA 65
             S+ + +E A
Sbjct:   218 SESKLIEQA 226


>UNIPROTKB|F1NZC8 [details] [associations]
            symbol:FOXN4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GeneTree:ENSGT00700000104051 EMBL:AADN02035003
            IPI:IPI00813841 Ensembl:ENSGALT00000008117 Uniprot:F1NZC8
        Length = 444

 Score = 115 (45.5 bits), Expect = 4.1e-06, P = 4.1e-06
 Identities = 27/76 (35%), Positives = 39/76 (51%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA---GHLW--NLSDMEPVEDA 65
             F +E FPY+    D WKNSVRHNLS+N  F K      G    G LW  N + ++ +E+ 
Sbjct:   188 FMKEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKMSGTSRKGCLWALNPAKIDKMEEE 247

Query:    66 SKSNWVSIKVTGVKRT 81
              +  W    +  + R+
Sbjct:   248 MQK-WKRKDLAAIHRS 262


>UNIPROTKB|C9JVP0 [details] [associations]
            symbol:FOXJ3 "Forkhead box protein J3" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 EMBL:CH471059 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            HOGENOM:HOG000231184 EMBL:AC096540 EMBL:AC114492 IPI:IPI00414683
            UniGene:Hs.26023 HGNC:HGNC:29178 ChiTaRS:FOXJ3 SMR:C9JVP0
            STRING:C9JVP0 Ensembl:ENST00000445886 Uniprot:C9JVP0
        Length = 382

 Score = 114 (45.2 bits), Expect = 4.2e-06, P = 4.2e-06
 Identities = 23/53 (43%), Positives = 30/53 (56%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNLSDMEPVED 64
             + FPYY +    WKNS+RHNLS+N  F K  ++    G G  W + D  P ED
Sbjct:   110 DNFPYYREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAI-DTNPKED 161


>UNIPROTKB|H9L2W5 [details] [associations]
            symbol:FOXD1 "Forkhead box protein D1" species:9031 "Gallus
            gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0001829 "trophectodermal cell
            differentiation" evidence=IEA] [GO:0001892 "embryonic placenta
            development" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GeneTree:ENSGT00700000104135 EMBL:AADN02041744
            Ensembl:ENSGALT00000036037 OMA:SSICEFI Uniprot:H9L2W5
        Length = 104

 Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 21/48 (43%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
             F   RFPYY +    W+NS+RHNLS+N  F K  +   + G G+ W L
Sbjct:    35 FISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 82


>UNIPROTKB|H0YJ22 [details] [associations]
            symbol:FOXN3 "Forkhead box protein N3" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            EMBL:AL138478 EMBL:AL356805 EMBL:AL357093 HGNC:HGNC:1928
            ChiTaRS:FOXN3 EMBL:AL137230 EMBL:AL137785 EMBL:AL157736
            EMBL:AL163032 Ensembl:ENST00000556916 Uniprot:H0YJ22
        Length = 111

 Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 24/44 (54%), Positives = 27/44 (61%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA-SQ--GAGHLW 54
             E FPY+      WKNSVRHNLS+N  F+K  K  SQ  G G LW
Sbjct:     7 EHFPYFANAPTGWKNSVRHNLSLNKCFKKVDKERSQSIGKGSLW 50


>RGD|621715 [details] [associations]
            symbol:Foxd3 "forkhead box D3" species:10116 "Rattus norvegicus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;ISS] [GO:0000790 "nuclear
            chromatin" evidence=ISO] [GO:0000977 "RNA polymerase II regulatory
            region sequence-specific DNA binding" evidence=ISO] [GO:0001227
            "RNA polymerase II transcription regulatory region
            sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=ISO]
            [GO:0001658 "branching involved in ureteric bud morphogenesis"
            evidence=IBA] [GO:0001701 "in utero embryonic development"
            evidence=ISO;ISS] [GO:0001755 "neural crest cell migration"
            evidence=IBA] [GO:0001822 "kidney development" evidence=IBA]
            [GO:0001829 "trophectodermal cell differentiation"
            evidence=ISO;IBA] [GO:0001892 "embryonic placenta development"
            evidence=ISO;IBA] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0003690 "double-stranded DNA binding" evidence=IMP] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISO;ISS] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=TAS] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0030318 "melanocyte differentiation" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA;ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;ISS;IBA] [GO:0048484 "enteric
            nervous system development" evidence=IBA] [GO:0048485 "sympathetic
            nervous system development" evidence=IBA] [GO:0048846 "axon
            extension involved in axon guidance" evidence=IBA] [GO:0048937
            "lateral line nerve glial cell development" evidence=IBA]
            [GO:0050935 "iridophore differentiation" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0051216 "cartilage development"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 RGD:621715 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0044212
            GO:GO:0001822 GO:GO:0003690 GO:GO:0051216 GO:GO:0001829
            GO:GO:0008134 GO:GO:0007389 GO:GO:0001658 GO:GO:0048485
            GO:GO:0030318 GO:GO:0001892 GO:GO:0048484 GO:GO:0051090
            GO:GO:0048846 eggNOG:COG5025 GO:GO:0048937 GO:GO:0050935
            HOGENOM:HOG000231285 EMBL:L13202 IPI:IPI00765696 PIR:I60917
            UniGene:Rn.92964 PDB:2HDC PDB:2HFH PDBsum:2HDC PDBsum:2HFH
            ProteinModelPortal:Q63245 SMR:Q63245 STRING:Q63245
            PhosphoSite:Q63245 UCSC:RGD:621715 HOVERGEN:HBG083674
            InParanoid:Q63245 EvolutionaryTrace:Q63245 ArrayExpress:Q63245
            Genevestigator:Q63245 GermOnline:ENSRNOG00000009021 Uniprot:Q63245
        Length = 101

 Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 21/48 (43%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
             F   RFPYY +    W+NS+RHNLS+N  F K  +   + G G+ W L
Sbjct:    32 FISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 79


>UNIPROTKB|Q63245 [details] [associations]
            symbol:Foxd3 "Forkhead box protein D3" species:10116
            "Rattus norvegicus" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 RGD:621715 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0044212
            GO:GO:0001822 GO:GO:0003690 GO:GO:0051216 GO:GO:0001829
            GO:GO:0008134 GO:GO:0007389 GO:GO:0001658 GO:GO:0048485
            GO:GO:0030318 GO:GO:0001892 GO:GO:0048484 GO:GO:0051090
            GO:GO:0048846 eggNOG:COG5025 GO:GO:0048937 GO:GO:0050935
            HOGENOM:HOG000231285 EMBL:L13202 IPI:IPI00765696 PIR:I60917
            UniGene:Rn.92964 PDB:2HDC PDB:2HFH PDBsum:2HDC PDBsum:2HFH
            ProteinModelPortal:Q63245 SMR:Q63245 STRING:Q63245
            PhosphoSite:Q63245 UCSC:RGD:621715 HOVERGEN:HBG083674
            InParanoid:Q63245 EvolutionaryTrace:Q63245 ArrayExpress:Q63245
            Genevestigator:Q63245 GermOnline:ENSRNOG00000009021 Uniprot:Q63245
        Length = 101

 Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 21/48 (43%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
             F   RFPYY +    W+NS+RHNLS+N  F K  +   + G G+ W L
Sbjct:    32 FISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 79


>UNIPROTKB|Q9XZM6 [details] [associations]
            symbol:fkh1 "Winged helix transcription factor Forkhead-1"
            species:7668 "Strongylocentrotus purpuratus" [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0048513 "organ
            development" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0051090
            GO:GO:0048513 GO:GO:0009888 KO:K09395 HSSP:Q63245 EMBL:AF149706
            RefSeq:NP_999797.1 UniGene:Spu.181 ProteinModelPortal:Q9XZM6
            SMR:Q9XZM6 GeneID:373496 KEGG:spu:373496 CTD:373496
            InParanoid:Q9XZM6 Uniprot:Q9XZM6
        Length = 360

 Score = 113 (44.8 bits), Expect = 4.8e-06, P = 4.8e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  +RFPYY +N  RW+NS+RHNLS N  F K  +     G G  W L
Sbjct:    42 FIMDRFPYYRKNTQRWQNSLRHNLSFNDCFLKIPRRPDRPGKGSYWAL 89


>ZFIN|ZDB-GENE-061214-6 [details] [associations]
            symbol:foxe3 "forkhead box E3" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0001654 "eye development"
            evidence=IMP] [GO:0002088 "lens development in camera-type eye"
            evidence=IMP] [GO:0002089 "lens morphogenesis in camera-type eye"
            evidence=IMP] [GO:0060023 "soft palate development" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0016477 "cell
            migration" evidence=IBA] [GO:0048484 "enteric nervous system
            development" evidence=IRD] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0048485 "sympathetic nervous system
            development" evidence=IRD] [GO:0007422 "peripheral nervous system
            development" evidence=IBA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0030878 "thyroid gland development" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0048562 "embryonic organ
            morphogenesis" evidence=IBA] [GO:0006590 "thyroid hormone
            generation" evidence=IBA] [GO:0005667 "transcription factor
            complex" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0060022 "hard palate development" evidence=IBA]
            [GO:0048846 "axon extension involved in axon guidance"
            evidence=IRD] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 ZFIN:ZDB-GENE-061214-6 GO:GO:0016477 GO:GO:0043565
            GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 GO:GO:0051090 GO:GO:0006590
            GO:GO:0002089 GO:GO:0060023 GO:GO:0009888 GO:GO:0060022
            GO:GO:0030878 GeneTree:ENSGT00700000104135 GO:GO:0048937
            HOVERGEN:HBG051642 KO:K09398 GO:GO:0048562 CTD:2301 EMBL:FP016062
            EMBL:BC163348 EMBL:BC163364 IPI:IPI00613897 RefSeq:NP_001073150.2
            UniGene:Dr.104252 SMR:B0UXI3 STRING:B0UXI3
            Ensembl:ENSDART00000091436 GeneID:570855 KEGG:dre:570855
            OMA:RENSKKW NextBio:20890323 Uniprot:B0UXI3
        Length = 422

 Score = 114 (45.2 bits), Expect = 4.9e-06, P = 4.9e-06
 Identities = 21/48 (43%), Positives = 30/48 (62%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
             F  ERFP+Y +N  +W+NS+RHNL++N  F K  +     G G+ W L
Sbjct:   132 FIMERFPFYRENSKKWQNSIRHNLTLNDCFVKIPREPGRPGKGNYWTL 179


>FB|FBgn0014143 [details] [associations]
            symbol:croc "crocodile" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0007380
            "specification of segmental identity, head" evidence=NAS;IMP]
            [GO:0003677 "DNA binding" evidence=NAS;IDA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0009653 "anatomical structure
            morphogenesis" evidence=IBA] [GO:0048513 "organ development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            EMBL:AE014296 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0003690
            GO:GO:0008134 GO:GO:0009653 GO:GO:0051090 GO:GO:0048513 EMBL:S80254
            EMBL:M96440 PIR:S59870 RefSeq:NP_524202.1 UniGene:Dm.5749
            ProteinModelPortal:P32027 SMR:P32027 STRING:P32027 PRIDE:P32027
            EnsemblMetazoa:FBtr0078395 GeneID:40374 KEGG:dme:Dmel_CG5069
            CTD:40374 FlyBase:FBgn0014143 eggNOG:COG5025
            GeneTree:ENSGT00700000104475 InParanoid:P32027 KO:K09396
            OMA:WYTPETP PhylomeDB:P32027 GenomeRNAi:40374 NextBio:818451
            Bgee:P32027 GermOnline:CG5069 GO:GO:0007380 GO:GO:0009888
            Uniprot:P32027
        Length = 508

 Score = 115 (45.5 bits), Expect = 5.1e-06, P = 5.1e-06
 Identities = 22/45 (48%), Positives = 27/45 (60%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             ERFPYY  N   W+NS+RHNLS+N  F K  +  +  G G  W L
Sbjct:   102 ERFPYYRDNKQGWQNSIRHNLSLNECFVKVARDDKKPGKGSYWTL 146


>ZFIN|ZDB-GENE-081022-71 [details] [associations]
            symbol:zgc:194189 "zgc:194189" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-081022-71 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 eggNOG:COG5025
            GeneTree:ENSGT00700000104135 OrthoDB:EOG4MCX19 HOGENOM:HOG000218632
            HOVERGEN:HBG051651 EMBL:CT573456 EMBL:BC162838 IPI:IPI00502363
            RefSeq:NP_001122282.1 UniGene:Dr.148363 Ensembl:ENSDART00000020616
            GeneID:100004081 KEGG:dre:100004081 OMA:RRVKRPY NextBio:20786110
            Uniprot:B3DHP4
        Length = 260

 Score = 110 (43.8 bits), Expect = 5.4e-06, P = 5.4e-06
 Identities = 24/56 (42%), Positives = 32/56 (57%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA--GHLWNL 56
             LT N    +   +FPYY +N   W+NS+RHNLS+N  F K  + S G   G+ W L
Sbjct:    56 LTLNDIYSYIISKFPYYEKNKKGWQNSIRHNLSLNECFVKIPRESGGERKGNFWTL 111


>RGD|1594158 [details] [associations]
            symbol:LOC680273 "similar to Forkhead box protein L1
            (Forkhead-related protein FKHL11) (Forkhead-related transcription
            factor 7) (FREAC-7)" species:10116 "Rattus norvegicus" [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0007420 "brain
            development" evidence=IBA] [GO:0007495 "visceral mesoderm-endoderm
            interaction involved in midgut development" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0009790
            "embryo development" evidence=IBA] [GO:0009887 "organ
            morphogenesis" evidence=IBA] [GO:0030111 "regulation of Wnt
            receptor signaling pathway" evidence=IBA] [GO:0030166 "proteoglycan
            biosynthetic process" evidence=IBA] [GO:0035136 "forelimb
            morphogenesis" evidence=IBA] [GO:0043010 "camera-type eye
            development" evidence=IBA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0051090 "regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0051216 "cartilage development" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 RGD:1594158
            GO:GO:0007420 GO:GO:0030111 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0043010 GO:GO:0009790 GO:GO:0009887 GO:GO:0003690
            GO:GO:0051216 GO:GO:0008134 GO:GO:0007389 GO:GO:0035136
            GO:GO:0051090 GO:GO:0030166 GeneTree:ENSGT00700000104094
            GO:GO:0007495 IPI:IPI00763317 Ensembl:ENSRNOT00000060192
            OMA:FATGCES Uniprot:F1LWK1
        Length = 98

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 20/50 (40%), Positives = 28/50 (56%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKAS---QGAGHLWNLS 57
             F   +FPYY  N   W+NS+RHNLS+N  F K  +     +G G+ W  +
Sbjct:    26 FIMRKFPYYRANQRAWQNSIRHNLSLNSCFVKVPRTEGHDKGKGNYWTFA 75


>RGD|621712 [details] [associations]
            symbol:Foxd1 "forkhead box D1" species:10116 "Rattus norvegicus"
            [GO:0001658 "branching involved in ureteric bud morphogenesis"
            evidence=ISO] [GO:0001755 "neural crest cell migration"
            evidence=IBA] [GO:0001822 "kidney development" evidence=ISO]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0007411 "axon guidance"
            evidence=ISO] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=ISO;IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0010628
            "positive regulation of gene expression" evidence=ISO;ISS]
            [GO:0030318 "melanocyte differentiation" evidence=IBA] [GO:0030513
            "positive regulation of BMP signaling pathway"
            evidence=ISO;ISS;IBA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA;ISO] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO;IBA] [GO:0048484 "enteric nervous system
            development" evidence=IBA] [GO:0048485 "sympathetic nervous system
            development" evidence=IBA] [GO:0048846 "axon extension involved in
            axon guidance" evidence=IBA] [GO:0048937 "lateral line nerve glial
            cell development" evidence=IBA] [GO:0050935 "iridophore
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            [GO:0060678 "dichotomous subdivision of terminal units involved in
            ureteric bud branching" evidence=ISO;ISS;IBA] [GO:0072076
            "nephrogenic mesenchyme development" evidence=IEA;ISO] [GO:0072210
            "metanephric nephron development" evidence=IEA;ISO] [GO:0072213
            "metanephric capsule development" evidence=ISO;ISS] [GO:0072267
            "metanephric capsule specification" evidence=ISO;ISS] [GO:0072268
            "pattern specification involved in metanephros development"
            evidence=ISO] [GO:0090184 "positive regulation of kidney
            development" evidence=ISO;ISS;IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 RGD:621712
            GO:GO:0045892 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0030513 GO:GO:0051216 GO:GO:0008134 GO:GO:0048485
            GO:GO:0030318 GO:GO:0048484 GO:GO:0051090 GO:GO:0090184
            GO:GO:0048846 eggNOG:COG5025 GO:GO:0048937 GO:GO:0060678
            GO:GO:0050935 GO:GO:0072267 HOGENOM:HOG000231285 EMBL:L13192
            IPI:IPI00551801 PIR:I60922 UniGene:Rn.50822
            ProteinModelPortal:Q63251 SMR:Q63251 STRING:Q63251 UCSC:RGD:621712
            InParanoid:Q63251 ArrayExpress:Q63251 Genevestigator:Q63251
            GermOnline:ENSRNOG00000007759 Uniprot:Q63251
        Length = 101

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 22/51 (43%), Positives = 30/51 (58%)

Query:    15 RFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNLSDMEPVE 63
             RFPYY +    W+NS+RHNLS+N  F K  +   + G G+ W L D E  +
Sbjct:    36 RFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL-DPESAD 85


>UNIPROTKB|Q32NH9 [details] [associations]
            symbol:foxj1.2 "Forkhead box protein J1.2" species:8355
            "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 HSSP:Q01167 HOVERGEN:HBG056832
            EMBL:BC108616 RefSeq:NP_001089890.1 UniGene:Xl.55428
            ProteinModelPortal:Q32NH9 SMR:Q32NH9 GeneID:734957 KEGG:xla:734957
            CTD:734957 Xenbase:XB-GENE-919747 Uniprot:Q32NH9
        Length = 370

 Score = 95 (38.5 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
 Identities = 18/45 (40%), Positives = 24/45 (53%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             + F YY   D  W+NS+RHNLS+N  F K  +     G G  W +
Sbjct:   140 QNFCYYRHADPSWQNSIRHNLSLNKCFMKVPRGKDEPGKGGFWQM 184

 Score = 37 (18.1 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query:    87 GYYSERPKYDMLNTSGVL-RTCMCNSNETYMLCRKCKG 123
             G++   P+Y  +  +GVL R  M +S+     C K  G
Sbjct:   180 GFWQMDPRYADMFVNGVLKRRRMPSSHLDPPRCNKTIG 217


>UNIPROTKB|E1BTL6 [details] [associations]
            symbol:FOXJ2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0045893
            GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00700000104094
            OMA:DLSQDSP EMBL:AADN02063280 IPI:IPI00597240
            Ensembl:ENSGALT00000023154 Uniprot:E1BTL6
        Length = 542

 Score = 103 (41.3 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
 Identities = 20/45 (44%), Positives = 25/45 (55%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             + FPYY      WKNS+RHNLS+N  FRK  +     G G  W +
Sbjct:    98 DNFPYYKNAGIGWKNSIRHNLSLNKCFRKVPRPRDDPGKGSYWTI 142

 Score = 33 (16.7 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
 Identities = 5/12 (41%), Positives = 7/12 (58%)

Query:    59 MEPVEDASKSNW 70
             ME +  A + NW
Sbjct:   416 MESLRQAERKNW 427


>UNIPROTKB|D4ADN4 [details] [associations]
            symbol:D4ADN4 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            OrthoDB:EOG40GCRF IPI:IPI00949813 Ensembl:ENSRNOT00000052350
            Uniprot:D4ADN4
        Length = 363

 Score = 112 (44.5 bits), Expect = 6.3e-06, P = 6.3e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  ERFPYY ++  RW+NS+RHNLS N  F K  +     G G  W L
Sbjct:    42 FIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>FB|FBgn0004897 [details] [associations]
            symbol:fd96Ca "forkhead domain 96Ca" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0009790 "embryo development" evidence=IBA;NAS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0048806 "genitalia development" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0048813 "dendrite morphogenesis" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003705 "RNA polymerase
            II distal enhancer sequence-specific DNA binding transcription
            factor activity" evidence=IBA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0051090 "regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            EMBL:AE014297 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0048806 GO:GO:0008301
            GO:GO:0009790 GO:GO:0048813 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 eggNOG:COG5025 GO:GO:0009888 KO:K09411
            GeneTree:ENSGT00700000104135 EMBL:BT029152 EMBL:M96443
            RefSeq:NP_524495.1 UniGene:Dm.27400 ProteinModelPortal:P32028
            SMR:P32028 EnsemblMetazoa:FBtr0084770 GeneID:43010
            KEGG:dme:Dmel_CG11921 CTD:43010 FlyBase:FBgn0004897
            InParanoid:P32028 OMA:DIDVVEC OrthoDB:EOG4CFXR1 PhylomeDB:P32028
            GenomeRNAi:43010 NextBio:831795 Bgee:P32028 GermOnline:CG11921
            Uniprot:P32028
        Length = 372

 Score = 112 (44.5 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  +RFPYY +N  RW+NS+RHNLS N  F K  +     G G  W L
Sbjct:    42 FITDRFPYYRKNTQRWQNSLRHNLSFNDCFIKVPRRPDRPGKGAYWAL 89


>MGI|MGI:1347469 [details] [associations]
            symbol:Foxl1 "forkhead box L1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=ISO] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA;TAS] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0007420 "brain development"
            evidence=IBA] [GO:0007495 "visceral mesoderm-endoderm interaction
            involved in midgut development" evidence=IMP] [GO:0007507 "heart
            development" evidence=ISO] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009887 "organ morphogenesis" evidence=IBA] [GO:0030111
            "regulation of Wnt receptor signaling pathway" evidence=IMP]
            [GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
            [GO:0035136 "forelimb morphogenesis" evidence=IBA] [GO:0043010
            "camera-type eye development" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=ISO] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0051216 "cartilage development"
            evidence=IBA] [GO:0061146 "Peyer's patch morphogenesis"
            evidence=IMP] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 MGI:MGI:1347469 GO:GO:0007420 GO:GO:0030111
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0043010
            GO:GO:0009790 GO:GO:0009887 GO:GO:0003690 GO:GO:0051216
            GO:GO:0008134 EMBL:CH466525 GO:GO:0007389 GO:GO:0035136
            GO:GO:0061146 GO:GO:0051090 GO:GO:0030166 CTD:2300
            HOVERGEN:HBG051650 KO:K09405 GO:GO:0007495 EMBL:X92498
            EMBL:BC137805 EMBL:BC137806 EMBL:X71944 IPI:IPI00138057 PIR:F47746
            RefSeq:NP_032050.2 UniGene:Mm.5111 ProteinModelPortal:Q64731
            IntAct:Q64731 PRIDE:Q64731 GeneID:14241 KEGG:mmu:14241
            NextBio:285543 CleanEx:MM_FOXL1 Genevestigator:Q64731
            Uniprot:Q64731
        Length = 336

 Score = 111 (44.1 bits), Expect = 7.1e-06, P = 7.1e-06
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRK--GVKASQGAGHLWNL 56
             F  +RFP+Y+ N   W+NS+RHNLS+N  F K    K   G G  W L
Sbjct:    78 FIMDRFPFYHDNRQGWQNSIRHNLSLNECFVKVPREKGRPGKGSYWTL 125


>UNIPROTKB|F1S6I8 [details] [associations]
            symbol:FOXL1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0007507 "heart development" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0007507 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 KO:K09405 OMA:PFLSYFP EMBL:FP102684
            RefSeq:XP_003126859.1 Ensembl:ENSSSCT00000002949 GeneID:100511634
            KEGG:ssc:100511634 Uniprot:F1S6I8
        Length = 338

 Score = 111 (44.1 bits), Expect = 7.1e-06, P = 7.1e-06
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRK--GVKASQGAGHLWNL 56
             F  +RFP+Y+ N   W+NS+RHNLS+N  F K    K   G G  W L
Sbjct:    78 FIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVKVPREKGRPGKGSYWTL 125


>UNIPROTKB|P33205 [details] [associations]
            symbol:foxa4-a "Forkhead box protein A4-A" species:8355
            "Xenopus laevis" [GO:0001707 "mesoderm formation" evidence=IMP]
            [GO:0001840 "neural plate development" evidence=IMP] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0005634 "nucleus" evidence=IC;NAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0009948 "anterior/posterior axis specification" evidence=IMP]
            [GO:0030900 "forebrain development" evidence=IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IDA]
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0045892 GO:GO:0030154 GO:GO:0043565 GO:GO:0030900
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0001707 GO:GO:0009948 GO:GO:0001840 InterPro:IPR018533
            Pfam:PF09354 HOVERGEN:HBG006621 EMBL:X65171 EMBL:U65751
            EMBL:BC082358 PIR:S35719 RefSeq:NP_001080963.1 UniGene:Xl.441
            ProteinModelPortal:P33205 SMR:P33205 GeneID:394304 KEGG:xla:394304
            CTD:394304 Xenbase:XB-GENE-865612 Uniprot:P33205
        Length = 399

 Score = 112 (44.5 bits), Expect = 7.4e-06, P = 7.4e-06
 Identities = 21/43 (48%), Positives = 27/43 (62%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FPYY QN  RW+NS+RH+LS N  F K  ++ +  G G  W L
Sbjct:   153 FPYYRQNQQRWQNSIRHSLSFNDCFVKVPRSPEKPGKGSYWTL 195


>UNIPROTKB|Q6P839 [details] [associations]
            symbol:foxa4 "Forkhead box protein A4" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0010817
            "regulation of hormone levels" evidence=IBA] [GO:0019904 "protein
            domain specific binding" evidence=IBA] [GO:0042593 "glucose
            homeostasis" evidence=IBA] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISS] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IBA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0048665 "neuron fate specification" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0060441
            "epithelial tube branching involved in lung morphogenesis"
            evidence=IBA] [GO:0060487 "lung epithelial cell differentiation"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0019904 GO:GO:0045892 GO:GO:0043565 GO:GO:0045944
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0042593 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0045666 GO:GO:0008134 GO:GO:0007389 GO:GO:0060487
            GO:GO:0048665 GO:GO:0051090 GO:GO:0010817 GO:GO:0060441
            eggNOG:COG5025 HSSP:Q99958 InterPro:IPR018533 Pfam:PF09354
            HOGENOM:HOG000231817 HOVERGEN:HBG006621 OrthoDB:EOG43R3NB
            EMBL:CR762190 EMBL:BC061392 RefSeq:NP_988938.1 UniGene:Str.6030
            ProteinModelPortal:Q6P839 SMR:Q6P839 STRING:Q6P839 GeneID:394535
            KEGG:xtr:394535 CTD:394535 Xenbase:XB-GENE-486455 InParanoid:Q6P839
            Bgee:Q6P839 Uniprot:Q6P839
        Length = 399

 Score = 112 (44.5 bits), Expect = 7.4e-06, P = 7.4e-06
 Identities = 21/43 (48%), Positives = 27/43 (62%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FPYY QN  RW+NS+RH+LS N  F K  ++ +  G G  W L
Sbjct:   153 FPYYRQNQQRWQNSIRHSLSFNDCFVKVPRSPEKPGKGSYWTL 195


>UNIPROTKB|Q12952 [details] [associations]
            symbol:FOXL1 "Forkhead box protein L1" species:9606 "Homo
            sapiens" [GO:0007507 "heart development" evidence=IMP] [GO:0008301
            "DNA binding, bending" evidence=IBA;NAS] [GO:0007275 "multicellular
            organismal development" evidence=NAS] [GO:0003690 "double-stranded
            DNA binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007420 "brain development" evidence=IBA]
            [GO:0007495 "visceral mesoderm-endoderm interaction involved in
            midgut development" evidence=ISS;IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0009887 "organ morphogenesis" evidence=ISS;IBA]
            [GO:0030111 "regulation of Wnt receptor signaling pathway"
            evidence=ISS;IBA] [GO:0030166 "proteoglycan biosynthetic process"
            evidence=ISS;IBA] [GO:0035136 "forelimb morphogenesis"
            evidence=IBA] [GO:0043010 "camera-type eye development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0051216
            "cartilage development" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IC] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=NAS] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0003677
            "DNA binding" evidence=IDA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0007420 GO:GO:0007507
            GO:GO:0030111 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0043010
            GO:GO:0009790 GO:GO:0009887 GO:GO:0003690 GO:GO:0051216
            GO:GO:0008134 GO:GO:0007389 GO:GO:0035136 GO:GO:0051090
            GO:GO:0030166 eggNOG:COG5025 OrthoDB:EOG4MCX19 EMBL:AC009108
            EMBL:AF315075 EMBL:BC117226 EMBL:U13225 IPI:IPI00030343 PIR:S51630
            RefSeq:NP_005241.1 UniGene:Hs.533830 ProteinModelPortal:Q12952
            SMR:Q12952 STRING:Q12952 DMDM:13638268 PRIDE:Q12952
            Ensembl:ENST00000320241 GeneID:2300 KEGG:hsa:2300 UCSC:uc002fjr.3
            CTD:2300 GeneCards:GC16P086612 HGNC:HGNC:3817 MIM:603252
            neXtProt:NX_Q12952 PharmGKB:PA28234 HOGENOM:HOG000112632
            HOVERGEN:HBG051650 InParanoid:Q12952 KO:K09405 OMA:PFLSYFP
            PhylomeDB:Q12952 GenomeRNAi:2300 NextBio:9337 Bgee:Q12952
            CleanEx:HS_FOXL1 Genevestigator:Q12952 GermOnline:ENSG00000176678
            GO:GO:0007495 Uniprot:Q12952
        Length = 345

 Score = 111 (44.1 bits), Expect = 7.4e-06, P = 7.4e-06
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRK--GVKASQGAGHLWNL 56
             F  +RFP+Y+ N   W+NS+RHNLS+N  F K    K   G G  W L
Sbjct:    78 FIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVKVPREKGRPGKGSYWTL 125


>UNIPROTKB|P33206 [details] [associations]
            symbol:foxa4-b "Forkhead box protein A4-B" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISS] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0045892 GO:GO:0007399 GO:GO:0030154
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 InterPro:IPR018533 Pfam:PF09354 HOVERGEN:HBG006621
            EMBL:S93559 EMBL:U65750 EMBL:BC082641 PIR:A42237
            RefSeq:NP_001081076.1 UniGene:Xl.1082 ProteinModelPortal:P33206
            SMR:P33206 GeneID:394368 KEGG:xla:394368 CTD:394368
            Xenbase:XB-GENE-6254437 Uniprot:P33206
        Length = 400

 Score = 112 (44.5 bits), Expect = 7.4e-06, P = 7.4e-06
 Identities = 21/43 (48%), Positives = 27/43 (62%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FPYY QN  RW+NS+RH+LS N  F K  ++ +  G G  W L
Sbjct:   153 FPYYRQNQQRWQNSIRHSLSFNDCFIKVPRSPEKPGKGSYWTL 195


>UNIPROTKB|F1ME43 [details] [associations]
            symbol:FOXL1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0007507 "heart development" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0007507 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 CTD:2300 KO:K09405 OMA:PFLSYFP
            EMBL:DAAA02046218 IPI:IPI00710921 RefSeq:XP_002694802.1
            RefSeq:XP_583889.1 Ensembl:ENSBTAT00000053216 GeneID:538955
            KEGG:bta:538955 NextBio:20877688 Uniprot:F1ME43
        Length = 346

 Score = 111 (44.1 bits), Expect = 7.5e-06, P = 7.5e-06
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRK--GVKASQGAGHLWNL 56
             F  +RFP+Y+ N   W+NS+RHNLS+N  F K    K   G G  W L
Sbjct:    78 FIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVKVPREKGRPGKGSYWTL 125


>UNIPROTKB|E2QSH5 [details] [associations]
            symbol:FOXL1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0007507 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 CTD:2300 KO:K09405 OMA:PFLSYFP
            EMBL:AAEX03003995 RefSeq:XP_851625.1 Ensembl:ENSCAFT00000031682
            GeneID:609291 KEGG:cfa:609291 NextBio:20894896 Uniprot:E2QSH5
        Length = 356

 Score = 111 (44.1 bits), Expect = 7.8e-06, P = 7.8e-06
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRK--GVKASQGAGHLWNL 56
             F  +RFP+Y+ N   W+NS+RHNLS+N  F K    K   G G  W L
Sbjct:    78 FIMDRFPFYHDNRQGWQNSIRHNLSLNECFVKVPREKGRPGKGSYWTL 125


>RGD|1311770 [details] [associations]
            symbol:Foxj3 "forkhead box J3" species:10116 "Rattus norvegicus"
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0019904 "protein
            domain specific binding" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IBA]
            [GO:0048513 "organ development" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 RGD:1311770 GO:GO:0019904
            GO:GO:0045893 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0051090
            GO:GO:0048513 GO:GO:0009888 IPI:IPI00359077
            Ensembl:ENSRNOT00000041401 UCSC:RGD:1311770 ArrayExpress:F1M9U9
            Uniprot:F1M9U9
        Length = 587

 Score = 114 (45.2 bits), Expect = 7.9e-06, P = 7.9e-06
 Identities = 23/53 (43%), Positives = 30/53 (56%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNLSDMEPVED 64
             + FPYY +    WKNS+RHNLS+N  F K  ++    G G  W + D  P ED
Sbjct:   109 DNFPYYREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAI-DTNPKED 160


>MGI|MGI:1347468 [details] [associations]
            symbol:Foxb2 "forkhead box B2" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0007420 "brain development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0051090 "regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            MGI:MGI:1347468 GO:GO:0007420 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0000122
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 eggNOG:COG5025 GO:GO:0009888
            GeneTree:ENSGT00700000104135 HOGENOM:HOG000007545
            HOVERGEN:HBG102104 KO:K09395 OrthoDB:EOG40GCRF CTD:442425
            OMA:CHSASQS EMBL:X92591 EMBL:X71942 IPI:IPI00138060 PIR:D47746
            RefSeq:NP_032049.1 UniGene:Mm.7971 ProteinModelPortal:Q64733
            SMR:Q64733 PRIDE:Q64733 Ensembl:ENSMUST00000072915 GeneID:14240
            KEGG:mmu:14240 InParanoid:Q64733 NextBio:285539 Bgee:Q64733
            CleanEx:MM_FOXB2 Genevestigator:Q64733
            GermOnline:ENSMUSG00000056829 Uniprot:Q64733
        Length = 428

 Score = 112 (44.5 bits), Expect = 8.3e-06, P = 8.3e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  ERFPYY ++  RW+NS+RHNLS N  F K  +     G G  W L
Sbjct:    42 FIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>UNIPROTKB|G3V3A7 [details] [associations]
            symbol:FOXN3 "Forkhead box protein N3" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 EMBL:AL138478 EMBL:AL356805
            EMBL:AL357093 HGNC:HGNC:1928 ChiTaRS:FOXN3 EMBL:AL137230
            EMBL:AL137785 EMBL:AL157736 EMBL:AL163032 ProteinModelPortal:G3V3A7
            SMR:G3V3A7 Ensembl:ENST00000555855 ArrayExpress:G3V3A7 Bgee:G3V3A7
            Uniprot:G3V3A7
        Length = 208

 Score = 106 (42.4 bits), Expect = 8.3e-06, P = 8.3e-06
 Identities = 24/44 (54%), Positives = 27/44 (61%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA-SQ--GAGHLW 54
             E FPY+      WKNSVRHNLS+N  F+K  K  SQ  G G LW
Sbjct:   146 EHFPYFANAPTGWKNSVRHNLSLNKCFKKVDKERSQSIGKGSLW 189


>UNIPROTKB|Q6LD29 [details] [associations]
            symbol:foxa1-a "Forkhead box protein A1-A" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 HSSP:Q99958
            InterPro:IPR018533 Pfam:PF09354 HOVERGEN:HBG006621 EMBL:U04873
            ProteinModelPortal:Q6LD29 SMR:Q6LD29 Uniprot:Q6LD29
        Length = 429

 Score = 112 (44.5 bits), Expect = 8.3e-06, P = 8.3e-06
 Identities = 21/43 (48%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FPYY QN  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   193 FPYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTL 235


>UNIPROTKB|F1SIL8 [details] [associations]
            symbol:FOXB2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00700000104135
            KO:K09395 OMA:CHSASQS EMBL:CU571101 RefSeq:XP_001925193.2
            Ensembl:ENSSSCT00000005814 GeneID:100156565 KEGG:ssc:100156565
            Uniprot:F1SIL8
        Length = 430

 Score = 112 (44.5 bits), Expect = 8.3e-06, P = 8.3e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  ERFPYY ++  RW+NS+RHNLS N  F K  +     G G  W L
Sbjct:    42 FIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>RGD|621723 [details] [associations]
            symbol:Foxe1 "forkhead box E1 (thyroid transcription factor 2)"
            species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0000981 "sequence-specific DNA binding RNA polymerase II
            transcription factor activity" evidence=IDA] [GO:0002089 "lens
            morphogenesis in camera-type eye" evidence=IBA] [GO:0003677 "DNA
            binding" evidence=ISO;IDA] [GO:0003690 "double-stranded DNA
            binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO;TAS] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0006590 "thyroid hormone
            generation" evidence=ISO;IBA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0007422 "peripheral nervous system
            development" evidence=IRD] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0016477 "cell migration" evidence=ISO;IBA]
            [GO:0030878 "thyroid gland development" evidence=ISO;IBA]
            [GO:0031069 "hair follicle morphogenesis" evidence=ISO;IBA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IBA] [GO:0048484 "enteric
            nervous system development" evidence=IRD] [GO:0048485 "sympathetic
            nervous system development" evidence=IRD] [GO:0048538 "thymus
            development" evidence=IEA;ISO] [GO:0048562 "embryonic organ
            morphogenesis" evidence=ISO;IBA] [GO:0048846 "axon extension
            involved in axon guidance" evidence=IRD] [GO:0048937 "lateral line
            nerve glial cell development" evidence=IRD] [GO:0051090 "regulation
            of sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0060022 "hard palate development"
            evidence=ISO;IBA] [GO:0060023 "soft palate development"
            evidence=ISO;IBA] [GO:0060465 "pharynx development"
            evidence=IEA;ISO] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 RGD:621723 GO:GO:0016477
            GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0000122 GO:GO:0008301
            GO:GO:0003690 GO:GO:0048538 GO:GO:0008134 EMBL:CH473962
            GO:GO:0007389 GO:GO:0060465 GO:GO:0051090 GO:GO:0031069
            GO:GO:0006590 GO:GO:0002089 GO:GO:0060023 eggNOG:COG5025
            GO:GO:0060022 GO:GO:0030878 GeneTree:ENSGT00700000104135
            HSSP:Q63245 CTD:2304 HOGENOM:HOG000231286 HOVERGEN:HBG051642
            KO:K09398 OMA:TGYQPAG GO:GO:0048562 EMBL:Y11321 IPI:IPI00195679
            RefSeq:NP_620264.1 UniGene:Rn.26546 SMR:O08771 STRING:O08771
            Ensembl:ENSRNOT00000012637 GeneID:192274 KEGG:rno:192274
            UCSC:RGD:621723 InParanoid:O08771 NextBio:622984
            Genevestigator:O08771 Uniprot:O08771
        Length = 370

 Score = 111 (44.1 bits), Expect = 8.4e-06, P = 8.4e-06
 Identities = 21/48 (43%), Positives = 30/48 (62%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKAS--QGAGHLWNL 56
             F  ERFP+Y  N  +W+NS+RHNL++N  F K  + +   G G+ W L
Sbjct:    83 FITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGRPGKGNYWAL 130


>UNIPROTKB|Q5VYV0 [details] [associations]
            symbol:FOXB2 "Forkhead box protein B2" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0007420 "brain
            development" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0007420 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 eggNOG:COG5025 GO:GO:0009888
            HOGENOM:HOG000007545 HOVERGEN:HBG102104 KO:K09395 OrthoDB:EOG40GCRF
            HSSP:Q63245 EMBL:AL353637 IPI:IPI00455929 RefSeq:NP_001013757.1
            UniGene:Hs.553843 ProteinModelPortal:Q5VYV0 SMR:Q5VYV0
            STRING:Q5VYV0 DMDM:74747718 PRIDE:Q5VYV0 Ensembl:ENST00000376708
            GeneID:442425 KEGG:hsa:442425 UCSC:uc004ako.1 CTD:442425
            GeneCards:GC09P079634 HGNC:HGNC:23315 neXtProt:NX_Q5VYV0
            PharmGKB:PA145148830 InParanoid:Q5VYV0 OMA:CHSASQS NextBio:111077
            CleanEx:HS_FOXB2 Genevestigator:Q5VYV0 Uniprot:Q5VYV0
        Length = 432

 Score = 112 (44.5 bits), Expect = 8.4e-06, P = 8.4e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  ERFPYY ++  RW+NS+RHNLS N  F K  +     G G  W L
Sbjct:    42 FIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>MGI|MGI:1353500 [details] [associations]
            symbol:Foxe1 "forkhead box E1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;IBA] [GO:0000981
            "sequence-specific DNA binding RNA polymerase II transcription
            factor activity" evidence=ISO] [GO:0002089 "lens morphogenesis in
            camera-type eye" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=ISO] [GO:0003690 "double-stranded DNA binding"
            evidence=ISO;IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0006590 "thyroid hormone
            generation" evidence=IMP] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0016477 "cell migration" evidence=IMP] [GO:0030878 "thyroid
            gland development" evidence=ISO;IMP] [GO:0031069 "hair follicle
            morphogenesis" evidence=IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0048562 "embryonic organ morphogenesis"
            evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0060022
            "hard palate development" evidence=ISO;IBA] [GO:0060023 "soft
            palate development" evidence=ISO;IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 MGI:MGI:1353500
            GO:GO:0016477 GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0000122
            GO:GO:0008301 GO:GO:0003690 GO:GO:0048538 GO:GO:0008134
            GO:GO:0007389 GO:GO:0060465 GO:GO:0051090 GO:GO:0031069
            GO:GO:0006590 GO:GO:0002089 GO:GO:0060023 eggNOG:COG5025
            GO:GO:0060022 GO:GO:0030878 GeneTree:ENSGT00700000104135 CTD:2304
            HOGENOM:HOG000231286 HOVERGEN:HBG051642 KO:K09398 OMA:TGYQPAG
            GO:GO:0048562 EMBL:AJ457047 EMBL:AL806523 IPI:IPI00153583
            RefSeq:NP_899121.1 UniGene:Mm.354634 ProteinModelPortal:Q8R2I0
            SMR:Q8R2I0 STRING:Q8R2I0 PhosphoSite:Q8R2I0 PRIDE:Q8R2I0
            DNASU:110805 Ensembl:ENSMUST00000095097 GeneID:110805
            KEGG:mmu:110805 UCSC:uc008sto.1 InParanoid:A2AM00 NextBio:364693
            Bgee:Q8R2I0 CleanEx:MM_FOXE1 Genevestigator:Q8R2I0 Uniprot:Q8R2I0
        Length = 371

 Score = 111 (44.1 bits), Expect = 8.4e-06, P = 8.4e-06
 Identities = 21/48 (43%), Positives = 30/48 (62%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKAS--QGAGHLWNL 56
             F  ERFP+Y  N  +W+NS+RHNL++N  F K  + +   G G+ W L
Sbjct:    84 FITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGRPGKGNYWAL 131


>ZFIN|ZDB-GENE-010302-2 [details] [associations]
            symbol:foxc1b "forkhead box C1b" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043114 "regulation of vascular
            permeability" evidence=IGI] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048010 "vascular endothelial growth factor receptor signaling
            pathway" evidence=IBA] [GO:0001656 "metanephros development"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0001756 "somitogenesis" evidence=IBA] [GO:0001503
            "ossification" evidence=IBA] [GO:0031490 "chromatin DNA binding"
            evidence=IBA] [GO:0048844 "artery morphogenesis" evidence=IBA]
            [GO:0048343 "paraxial mesodermal cell fate commitment"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0055010 "ventricular cardiac muscle tissue
            morphogenesis" evidence=IBA] [GO:0005667 "transcription factor
            complex" evidence=IBA] [GO:0014034 "neural crest cell fate
            commitment" evidence=IBA] [GO:0060038 "cardiac muscle cell
            proliferation" evidence=IBA] [GO:0007219 "Notch signaling pathway"
            evidence=IBA] [GO:0035050 "embryonic heart tube development"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0046620 "regulation of organ growth"
            evidence=IBA] [GO:0001946 "lymphangiogenesis" evidence=IBA]
            [GO:0001974 "blood vessel remodeling" evidence=IBA] [GO:0030199
            "collagen fibril organization" evidence=IBA] [GO:0001657 "ureteric
            bud development" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0050880 "regulation of blood vessel size"
            evidence=IBA] [GO:0043010 "camera-type eye development"
            evidence=IGI] [GO:0001568 "blood vessel development" evidence=IGI]
            [GO:0001944 "vasculature development" evidence=IGI;IMP] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-010302-2 GO:GO:0043565 GO:GO:0030199 GO:GO:0045944
            GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0001756 GO:GO:0043010
            GO:GO:0001974 GO:GO:0003690 GO:GO:0001946 GO:GO:0008134
            GO:GO:0050880 GO:GO:0001503 GO:GO:0048844 GO:GO:0031490
            GO:GO:0001656 GO:GO:0001657 GO:GO:0051090 GO:GO:0046620
            GO:GO:0048010 GO:GO:0060038 GO:GO:0055010 eggNOG:COG5025
            GO:GO:0035050 HSSP:Q99958 GeneTree:ENSGT00690000101636
            HOVERGEN:HBG051640 OMA:QRIGLNN GO:GO:0014034 GO:GO:0048343
            HOGENOM:HOG000007939 OrthoDB:EOG4MCX19 EMBL:AF219950 EMBL:BX510653
            EMBL:BC046028 IPI:IPI00493033 RefSeq:NP_571804.1 UniGene:Dr.83301
            ProteinModelPortal:Q9DE24 SMR:Q9DE24 STRING:Q9DE24
            Ensembl:ENSDART00000077753 GeneID:79375 KEGG:dre:79375 CTD:79375
            InParanoid:Q9DE24 NextBio:20931552 Bgee:Q9DE24 Uniprot:Q9DE24
        Length = 433

 Score = 112 (44.5 bits), Expect = 8.4e-06, P = 8.4e-06
 Identities = 24/56 (42%), Positives = 31/56 (55%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             +T N    F  ERFP+Y  N   W+NS+RHNLS+N  F K  +  +  G G  W L
Sbjct:    95 ITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 150


>UNIPROTKB|E2RN41 [details] [associations]
            symbol:FOXB2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104135 OMA:CHSASQS EMBL:AAEX03000542
            EMBL:AAEX03000543 Ensembl:ENSCAFT00000002574 Uniprot:E2RN41
        Length = 434

 Score = 112 (44.5 bits), Expect = 8.4e-06, P = 8.4e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  ERFPYY ++  RW+NS+RHNLS N  F K  +     G G  W L
Sbjct:    42 FIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>UNIPROTKB|F1ME54 [details] [associations]
            symbol:FOXE1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0060465 "pharynx development" evidence=IEA] [GO:0060023
            "soft palate development" evidence=IEA] [GO:0060022 "hard palate
            development" evidence=IEA] [GO:0048562 "embryonic organ
            morphogenesis" evidence=IEA] [GO:0048538 "thymus development"
            evidence=IEA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0031069 "hair follicle
            morphogenesis" evidence=IEA] [GO:0030878 "thyroid gland
            development" evidence=IEA] [GO:0016477 "cell migration"
            evidence=IEA] [GO:0006590 "thyroid hormone generation"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045893 GO:GO:0016477
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0048538 GO:GO:0060465 GO:GO:0031069
            GO:GO:0006590 GO:GO:0060023 GO:GO:0060022 GO:GO:0030878
            GeneTree:ENSGT00700000104135 CTD:2304 KO:K09398 OMA:TGYQPAG
            GO:GO:0048562 EMBL:DAAA02023246 IPI:IPI00702358
            RefSeq:XP_002689770.1 RefSeq:XP_873930.3 UniGene:Bt.87684
            Ensembl:ENSBTAT00000019638 GeneID:616734 KEGG:bta:616734
            NextBio:20900290 Uniprot:F1ME54
        Length = 373

 Score = 111 (44.1 bits), Expect = 8.5e-06, P = 8.5e-06
 Identities = 21/48 (43%), Positives = 30/48 (62%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKAS--QGAGHLWNL 56
             F  ERFP+Y  N  +W+NS+RHNL++N  F K  + +   G G+ W L
Sbjct:    83 FITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGRPGKGNYWAL 130


>UNIPROTKB|O00358 [details] [associations]
            symbol:FOXE1 "Forkhead box protein E1" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISS;NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0009653 "anatomical structure morphogenesis"
            evidence=NAS] [GO:0002089 "lens morphogenesis in camera-type eye"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006590 "thyroid hormone generation"
            evidence=ISS;IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0016477 "cell migration" evidence=ISS;IBA] [GO:0031069 "hair
            follicle morphogenesis" evidence=ISS;IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0048484 "enteric nervous system development"
            evidence=IRD] [GO:0048485 "sympathetic nervous system development"
            evidence=IRD] [GO:0048562 "embryonic organ morphogenesis"
            evidence=ISS;IBA] [GO:0048846 "axon extension involved in axon
            guidance" evidence=IRD] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IRD] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0060022 "hard palate development" evidence=IMP]
            [GO:0060023 "soft palate development" evidence=IMP] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0030878 "thyroid gland development" evidence=IEP;IMP]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0048538 "thymus
            development" evidence=IEP] [GO:0060465 "pharynx development"
            evidence=IEP] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0016477 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 EMBL:CH471105
            GO:GO:0003690 GO:GO:0048538 GO:GO:0008134 GO:GO:0007389
            GO:GO:0060465 GO:GO:0051090 GO:GO:0031069 GO:GO:0006590
            Orphanet:146 GO:GO:0002089 GO:GO:0060023 eggNOG:COG5025
            GO:GO:0060022 GO:GO:0030878 EMBL:X94553 EMBL:U89995 EMBL:Y13386
            EMBL:AL499604 IPI:IPI00879523 RefSeq:NP_004464.2 UniGene:Hs.159234
            ProteinModelPortal:O00358 SMR:O00358 STRING:O00358
            PhosphoSite:O00358 PRIDE:O00358 DNASU:2304 Ensembl:ENST00000375123
            GeneID:2304 KEGG:hsa:2304 UCSC:uc004axu.3 CTD:2304
            GeneCards:GC09P100615 H-InvDB:HIX0034929 HGNC:HGNC:3806 MIM:241850
            MIM:602617 neXtProt:NX_O00358 Orphanet:95713 Orphanet:1226
            Orphanet:95720 PharmGKB:PA28223 HOGENOM:HOG000231286
            HOVERGEN:HBG051642 InParanoid:O00358 KO:K09398 OMA:TGYQPAG
            GenomeRNAi:2304 NextBio:9355 Bgee:O00358 CleanEx:HS_FOXE1
            CleanEx:HS_TTF2 Genevestigator:O00358 GermOnline:ENSG00000178919
            GO:GO:0048562 Uniprot:O00358
        Length = 373

 Score = 111 (44.1 bits), Expect = 8.5e-06, P = 8.5e-06
 Identities = 21/48 (43%), Positives = 30/48 (62%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKAS--QGAGHLWNL 56
             F  ERFP+Y  N  +W+NS+RHNL++N  F K  + +   G G+ W L
Sbjct:    82 FITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGRPGKGNYWAL 129


>UNIPROTKB|F1SSG9 [details] [associations]
            symbol:FOXE1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0060465 "pharynx development" evidence=IEA] [GO:0060023
            "soft palate development" evidence=IEA] [GO:0060022 "hard palate
            development" evidence=IEA] [GO:0048562 "embryonic organ
            morphogenesis" evidence=IEA] [GO:0048538 "thymus development"
            evidence=IEA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0031069 "hair follicle
            morphogenesis" evidence=IEA] [GO:0030878 "thyroid gland
            development" evidence=IEA] [GO:0016477 "cell migration"
            evidence=IEA] [GO:0006590 "thyroid hormone generation"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045893 GO:GO:0016477
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0048538 GO:GO:0060465 GO:GO:0031069
            GO:GO:0006590 GO:GO:0060023 GO:GO:0060022 GO:GO:0030878
            GeneTree:ENSGT00700000104135 KO:K09398 OMA:TGYQPAG GO:GO:0048562
            EMBL:CU234153 RefSeq:XP_001925267.1 UniGene:Ssc.95528
            Ensembl:ENSSSCT00000005909 GeneID:100157892 KEGG:ssc:100157892
            Uniprot:F1SSG9
        Length = 373

 Score = 111 (44.1 bits), Expect = 8.5e-06, P = 8.5e-06
 Identities = 21/48 (43%), Positives = 30/48 (62%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKAS--QGAGHLWNL 56
             F  ERFP+Y  N  +W+NS+RHNL++N  F K  + +   G G+ W L
Sbjct:    83 FITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGRPGKGNYWAL 130


>UNIPROTKB|Q6P8A3 [details] [associations]
            symbol:foxi1e "Forkhead box protein I1-ema" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0009957
            "epidermal cell fate specification" evidence=IBA] [GO:0042664
            "negative regulation of endodermal cell fate specification"
            evidence=ISS] [GO:0043049 "otic placode formation" evidence=IBA]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0048335 "negative regulation of mesodermal cell
            fate determination" evidence=ISS] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0045893 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0051090
            GO:GO:0043049 eggNOG:COG5025 GO:GO:0009957 HSSP:Q99958
            GeneTree:ENSGT00690000101636 GO:GO:0042664 CTD:2299
            HOGENOM:HOG000236333 HOVERGEN:HBG067944 KO:K09401 OrthoDB:EOG4XKV7D
            GO:GO:0048335 EMBL:BC061326 RefSeq:NP_988949.1 UniGene:Str.2357
            ProteinModelPortal:Q6P8A3 SMR:Q6P8A3 STRING:Q6P8A3
            Ensembl:ENSXETT00000005340 GeneID:394546 KEGG:xtr:394546
            Xenbase:XB-GENE-494125 InParanoid:Q6P8A3 OMA:FYNTINA Bgee:Q6P8A3
            Uniprot:Q6P8A3
        Length = 373

 Score = 111 (44.1 bits), Expect = 8.5e-06, P = 8.5e-06
 Identities = 28/91 (30%), Positives = 47/91 (51%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNLS-DMEPVEDASKSNW 70
             + FP+YN++   W+NS+RHNLS+N  F+K  +     G G+ W L  + E + D      
Sbjct:   155 DNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRR 214

Query:    71 VSIKVTGVKRTGWLAFGYYSERPKYDMLNTS 101
                + + V   G ++    S++P+   LN S
Sbjct:   215 KRKRKSDVSPNGQIS----SDKPEGSPLNES 241


>UNIPROTKB|F1M3L2 [details] [associations]
            symbol:Foxj3 "Protein Foxj3" species:10116 "Rattus
            norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 RGD:1311770 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104094 IPI:IPI00568727
            Ensembl:ENSRNOT00000011683 ArrayExpress:F1M3L2 Uniprot:F1M3L2
        Length = 621

 Score = 114 (45.2 bits), Expect = 8.6e-06, P = 8.6e-06
 Identities = 23/53 (43%), Positives = 30/53 (56%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNLSDMEPVED 64
             + FPYY +    WKNS+RHNLS+N  F K  ++    G G  W + D  P ED
Sbjct:   109 DNFPYYREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAI-DTNPKED 160


>UNIPROTKB|Q9UPW0 [details] [associations]
            symbol:FOXJ3 "Forkhead box protein J3" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0019904 "protein
            domain specific binding" evidence=IBA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IBA]
            [GO:0048513 "organ development" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0019904 GO:GO:0045893
            EMBL:CH471059 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0051090
            GO:GO:0048513 eggNOG:COG5025 GO:GO:0009888 HOGENOM:HOG000231184
            HOVERGEN:HBG051648 KO:K09403 EMBL:AB028964 EMBL:AC096540
            EMBL:AC114492 EMBL:BC014182 EMBL:BC151828 EMBL:BC152441
            EMBL:AL157422 IPI:IPI00010426 IPI:IPI00414683 PIR:T46900
            RefSeq:NP_001185779.1 RefSeq:NP_001185780.1 RefSeq:NP_001185781.1
            RefSeq:NP_055762.3 UniGene:Hs.26023 ProteinModelPortal:Q9UPW0
            SMR:Q9UPW0 IntAct:Q9UPW0 STRING:Q9UPW0 PhosphoSite:Q9UPW0
            DMDM:296434510 PRIDE:Q9UPW0 DNASU:22887 Ensembl:ENST00000361346
            Ensembl:ENST00000361776 Ensembl:ENST00000372572
            Ensembl:ENST00000372573 Ensembl:ENST00000545068 GeneID:22887
            KEGG:hsa:22887 UCSC:uc001che.3 UCSC:uc001chh.2 CTD:22887
            GeneCards:GC01M042642 HGNC:HGNC:29178 neXtProt:NX_Q9UPW0
            PharmGKB:PA134945417 InParanoid:Q9UPW0 OMA:MSQQHMM
            OrthoDB:EOG4MCX01 PhylomeDB:Q9UPW0 ChiTaRS:FOXJ3 GenomeRNAi:22887
            NextBio:43479 ArrayExpress:Q9UPW0 Bgee:Q9UPW0 CleanEx:HS_FOXJ3
            Genevestigator:Q9UPW0 GermOnline:ENSG00000198815 Uniprot:Q9UPW0
        Length = 622

 Score = 114 (45.2 bits), Expect = 8.6e-06, P = 8.6e-06
 Identities = 23/53 (43%), Positives = 30/53 (56%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNLSDMEPVED 64
             + FPYY +    WKNS+RHNLS+N  F K  ++    G G  W + D  P ED
Sbjct:   110 DNFPYYREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAI-DTNPKED 161


>UNIPROTKB|B7ZAP5 [details] [associations]
            symbol:FOXA1 "Hepatocyte nuclear factor 3-alpha"
            species:9606 "Homo sapiens" [GO:0008134 "transcription factor
            binding" evidence=IEA] [GO:0019904 "protein domain specific
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0042445 "hormone metabolic process" evidence=IEA] [GO:0042593
            "glucose homeostasis" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0045666 "positive regulation of
            neuron differentiation" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0048665 "neuron fate specification" evidence=IEA]
            [GO:0060441 "epithelial tube branching involved in lung
            morphogenesis" evidence=IEA] [GO:0060487 "lung epithelial cell
            differentiation" evidence=IEA] [GO:0060528 "secretory columnal
            luminar epithelial cell differentiation involved in prostate
            glandular acinus development" evidence=IEA] [GO:0060738
            "epithelial-mesenchymal signaling involved in prostate gland
            development" evidence=IEA] [GO:0060740 "prostate gland epithelium
            morphogenesis" evidence=IEA] [GO:0060741 "prostate gland stromal
            morphogenesis" evidence=IEA] [GO:0060743 "epithelial cell
            maturation involved in prostate gland development" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0042593 GO:GO:0006338
            GO:GO:0003690 GO:GO:0045666 GO:GO:0042445 GO:GO:0060740
            GO:GO:0060487 GO:GO:0048665 GO:GO:0060441 GO:GO:0060741
            GO:GO:0060743 InterPro:IPR018533 Pfam:PF09354 EMBL:AL121790
            HGNC:HGNC:5021 HOVERGEN:HBG006621 ChiTaRS:FOXA1 GO:GO:0060738
            GO:GO:0060528 EMBL:AK316360 IPI:IPI00024387 SMR:B7ZAP5
            STRING:B7ZAP5 Ensembl:ENST00000540786 Uniprot:B7ZAP5
        Length = 439

 Score = 112 (44.5 bits), Expect = 8.6e-06, P = 8.6e-06
 Identities = 21/43 (48%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FPYY QN  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   171 FPYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTL 213


>MGI|MGI:2443432 [details] [associations]
            symbol:Foxj3 "forkhead box J3" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0019904 "protein domain specific
            binding" evidence=IBA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IBA] [GO:0048513 "organ development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            MGI:MGI:2443432 GO:GO:0019904 GO:GO:0045893 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000122 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 GO:GO:0051090 GO:GO:0048513
            eggNOG:COG5025 GO:GO:0009888 GeneTree:ENSGT00700000104094
            HOGENOM:HOG000231184 HOVERGEN:HBG051648 KO:K09403 CTD:22887
            OMA:MSQQHMM OrthoDB:EOG4MCX01 EMBL:AK082840 EMBL:AK129271
            EMBL:AK139508 EMBL:AL645563 EMBL:BC058231 IPI:IPI00225578
            IPI:IPI00417077 RefSeq:NP_766287.1 UniGene:Mm.259227
            ProteinModelPortal:Q8BUR3 SMR:Q8BUR3 STRING:Q8BUR3
            PhosphoSite:Q8BUR3 PRIDE:Q8BUR3 Ensembl:ENSMUST00000044564
            Ensembl:ENSMUST00000106310 GeneID:230700 KEGG:mmu:230700
            UCSC:uc008umt.1 UCSC:uc008umu.1 InParanoid:A2AA37 NextBio:380061
            Bgee:Q8BUR3 CleanEx:MM_FOXJ3 Genevestigator:Q8BUR3
            GermOnline:ENSMUSG00000032998 Uniprot:Q8BUR3
        Length = 623

 Score = 114 (45.2 bits), Expect = 8.6e-06, P = 8.6e-06
 Identities = 23/53 (43%), Positives = 30/53 (56%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNLSDMEPVED 64
             + FPYY +    WKNS+RHNLS+N  F K  ++    G G  W + D  P ED
Sbjct:   110 DNFPYYREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAI-DTNPKED 161


>ZFIN|ZDB-GENE-040217-1 [details] [associations]
            symbol:ches1 "checkpoint suppressor 1" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 ZFIN:ZDB-GENE-040217-1 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 GO:GO:0009888
            GeneTree:ENSGT00700000104051 EMBL:BX890568 IPI:IPI00900072
            RefSeq:NP_001116217.1 UniGene:Dr.144120 Ensembl:ENSDART00000104137
            GeneID:555843 KEGG:dre:555843 CTD:555843 NextBio:20881192
            Uniprot:F1QZ26
        Length = 443

 Score = 112 (44.5 bits), Expect = 8.7e-06, P = 8.7e-06
 Identities = 24/46 (52%), Positives = 30/46 (65%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK-ASQ--GAGHLWNL 56
             E FPY++     WKNSVRHNLS+N  F+K  K  SQ  G G LW++
Sbjct:   142 EHFPYFSSAPTGWKNSVRHNLSLNKCFKKVDKDRSQSIGKGSLWSI 187


>UNIPROTKB|E2QSA5 [details] [associations]
            symbol:FOXA1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0060743 "epithelial cell maturation involved
            in prostate gland development" evidence=IEA] [GO:0060741 "prostate
            gland stromal morphogenesis" evidence=IEA] [GO:0060740 "prostate
            gland epithelium morphogenesis" evidence=IEA] [GO:0060738
            "epithelial-mesenchymal signaling involved in prostate gland
            development" evidence=IEA] [GO:0060528 "secretory columnal luminar
            epithelial cell differentiation involved in prostate glandular
            acinus development" evidence=IEA] [GO:0060487 "lung epithelial cell
            differentiation" evidence=IEA] [GO:0060441 "epithelial tube
            branching involved in lung morphogenesis" evidence=IEA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0048665 "neuron fate
            specification" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045931 "positive regulation of mitotic cell cycle"
            evidence=IEA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042593 "glucose
            homeostasis" evidence=IEA] [GO:0042445 "hormone metabolic process"
            evidence=IEA] [GO:0033148 "positive regulation of intracellular
            estrogen receptor signaling pathway" evidence=IEA] [GO:0032355
            "response to estradiol stimulus" evidence=IEA] [GO:0010719
            "negative regulation of epithelial to mesenchymal transition"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0019904 "protein domain specific binding" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0051091 GO:GO:0032355 GO:GO:0045931 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0042593 GO:GO:0006338 GO:GO:0044212 GO:GO:0045666
            GO:GO:0042445 GO:GO:0033148 GO:GO:0060740 GO:GO:0060487
            GO:GO:0048665 GO:GO:0060441 GO:GO:0010719 GO:GO:0060741
            GO:GO:0060743 InterPro:IPR018533 Pfam:PF09354 GO:GO:0060738
            GO:GO:0060528 Ensembl:ENSCAFT00000021805 Uniprot:E2QSA5
        Length = 452

 Score = 112 (44.5 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 21/43 (48%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FPYY QN  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   204 FPYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTL 246


>UNIPROTKB|Q9PVY8 [details] [associations]
            symbol:foxc2-b "Forkhead box protein C2-B" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0007498 "mesoderm development" evidence=ISS]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0007275 GO:GO:0005634 GO:GO:0045893
            GO:GO:0007498 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 HSSP:Q99958
            HOVERGEN:HBG051640 EMBL:AJ249225 EMBL:BC170193 EMBL:BC170195
            RefSeq:NP_001083920.1 UniGene:Xl.508 GeneID:399191 KEGG:xla:399191
            CTD:399191 Xenbase:XB-GENE-6254394 Uniprot:Q9PVY8
        Length = 461

 Score = 112 (44.5 bits), Expect = 9.3e-06, P = 9.3e-06
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             +T N    F  +RFP+Y +N   W+NS+RHNLS+N  F K  +  +  G G  W+L
Sbjct:    93 ITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWSL 148


>UNIPROTKB|H9L130 [details] [associations]
            symbol:FOXA2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0008134 "transcription factor binding" evidence=IEA]
            [GO:0019904 "protein domain specific binding" evidence=IEA]
            [GO:0000432 "positive regulation of transcription from RNA
            polymerase II promoter by glucose" evidence=IEA] [GO:0000433
            "negative regulation of transcription from RNA polymerase II
            promoter by glucose" evidence=IEA] [GO:0000978 "RNA polymerase II
            core promoter proximal region sequence-specific DNA binding"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IEA] [GO:0001705 "ectoderm formation" evidence=IEA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008344 "adult locomotory
            behavior" evidence=IEA] [GO:0010719 "negative regulation of
            epithelial to mesenchymal transition" evidence=IEA] [GO:0021533
            "cell differentiation in hindbrain" evidence=IEA] [GO:0021904
            "dorsal/ventral neural tube patterning" evidence=IEA] [GO:0023019
            "signal transduction involved in regulation of gene expression"
            evidence=IEA] [GO:0030193 "regulation of blood coagulation"
            evidence=IEA] [GO:0031018 "endocrine pancreas development"
            evidence=IEA] [GO:0032525 "somite rostral/caudal axis
            specification" evidence=IEA] [GO:0033132 "negative regulation of
            glucokinase activity" evidence=IEA] [GO:0040019 "positive
            regulation of embryonic development" evidence=IEA] [GO:0043433
            "negative regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0045665 "negative regulation of
            neuron differentiation" evidence=IEA] [GO:0045666 "positive
            regulation of neuron differentiation" evidence=IEA] [GO:0045945
            "positive regulation of transcription from RNA polymerase III
            promoter" evidence=IEA] [GO:0048468 "cell development"
            evidence=IEA] [GO:0048665 "neuron fate specification" evidence=IEA]
            [GO:0060441 "epithelial tube branching involved in lung
            morphogenesis" evidence=IEA] [GO:0060487 "lung epithelial cell
            differentiation" evidence=IEA] [GO:0061178 "regulation of insulin
            secretion involved in cellular response to glucose stimulus"
            evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
            evidence=IEA] [GO:0090009 "primitive streak formation"
            evidence=IEA] [GO:2000543 "positive regulation of gastrulation"
            evidence=IEA] [GO:2000971 "negative regulation of detection of
            glucose" evidence=IEA] [GO:2000976 "regulation of transcription
            from RNA polymerase II promoter involved in detection of glucose"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00700000104475
            EMBL:AADN02065893 Ensembl:ENSGALT00000029590 OMA:PASASPC
            Uniprot:H9L130
        Length = 264

 Score = 108 (43.1 bits), Expect = 9.3e-06, P = 9.3e-06
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FP+Y QN  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:    94 FPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTL 136


>UNIPROTKB|Q9PVY9 [details] [associations]
            symbol:foxc2-a "Forkhead box protein C2-A" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0007498 "mesoderm development" evidence=IEP]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0007275 GO:GO:0005634 GO:GO:0045893
            GO:GO:0007498 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 KO:K09396
            HSSP:Q99958 HOVERGEN:HBG051640 EMBL:AJ249224 EMBL:BC111544
            PIR:E56556 RefSeq:NP_001089960.2 UniGene:Xl.20334
            ProteinModelPortal:Q9PVY9 SMR:Q9PVY9 GeneID:735030 KEGG:xla:735030
            CTD:735030 Xenbase:XB-GENE-865122 Uniprot:Q9PVY9
        Length = 465

 Score = 112 (44.5 bits), Expect = 9.4e-06, P = 9.4e-06
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             +T N    F  +RFP+Y +N   W+NS+RHNLS+N  F K  +  +  G G  W+L
Sbjct:    93 ITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWSL 148


>RGD|2807 [details] [associations]
            symbol:Foxa1 "forkhead box A1" species:10116 "Rattus norvegicus"
          [GO:0000122 "negative regulation of transcription from RNA polymerase
          II promoter" evidence=ISO;IGI] [GO:0001077 "RNA polymerase II core
          promoter proximal region sequence-specific DNA binding transcription
          factor activity involved in positive regulation of transcription"
          evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003690
          "double-stranded DNA binding" evidence=IDA] [GO:0003700
          "sequence-specific DNA binding transcription factor activity"
          evidence=IEA;ISO;IDA] [GO:0003705 "RNA polymerase II distal enhancer
          sequence-specific DNA binding transcription factor activity"
          evidence=IBA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
          "transcription factor complex" evidence=IBA] [GO:0006338 "chromatin
          remodeling" evidence=ISO] [GO:0007389 "pattern specification process"
          evidence=IBA] [GO:0008134 "transcription factor binding"
          evidence=IEA;IPI] [GO:0008301 "DNA binding, bending" evidence=IBA]
          [GO:0009790 "embryo development" evidence=IBA] [GO:0010468
          "regulation of gene expression" evidence=ISO] [GO:0010719 "negative
          regulation of epithelial to mesenchymal transition" evidence=ISO]
          [GO:0010817 "regulation of hormone levels" evidence=IBA] [GO:0016568
          "chromatin modification" evidence=IEA] [GO:0019904 "protein domain
          specific binding" evidence=IEA;IDA] [GO:0030324 "lung development"
          evidence=ISO] [GO:0032355 "response to estradiol stimulus"
          evidence=ISO] [GO:0033148 "positive regulation of intracellular
          estrogen receptor signaling pathway" evidence=ISO] [GO:0035239 "tube
          morphogenesis" evidence=ISO] [GO:0042445 "hormone metabolic process"
          evidence=ISO] [GO:0042593 "glucose homeostasis" evidence=ISO;IBA]
          [GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO;IDA]
          [GO:0044212 "transcription regulatory region DNA binding"
          evidence=ISO] [GO:0045666 "positive regulation of neuron
          differentiation" evidence=ISO;IBA] [GO:0045931 "positive regulation
          of mitotic cell cycle" evidence=ISO] [GO:0045944 "positive regulation
          of transcription from RNA polymerase II promoter" evidence=ISO;IDA]
          [GO:0048665 "neuron fate specification" evidence=ISO;IBA] [GO:0051090
          "regulation of sequence-specific DNA binding transcription factor
          activity" evidence=IBA] [GO:0051091 "positive regulation of
          sequence-specific DNA binding transcription factor activity"
          evidence=ISO] [GO:0060441 "epithelial tube branching involved in lung
          morphogenesis" evidence=ISO;IBA] [GO:0060487 "lung epithelial cell
          differentiation" evidence=ISO;IBA] [GO:0060528 "secretory columnal
          luminar epithelial cell differentiation involved in prostate
          glandular acinus development" evidence=ISO;IBA] [GO:0060738
          "epithelial-mesenchymal signaling involved in prostate gland
          development" evidence=ISO;IBA] [GO:0060740 "prostate gland epithelium
          morphogenesis" evidence=ISO;IBA] [GO:0060741 "prostate gland stromal
          morphogenesis" evidence=ISO;IBA] [GO:0060743 "epithelial cell
          maturation involved in prostate gland development" evidence=ISO;IBA]
          InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250
          Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
          PROSITE:PS50039 SMART:SM00339 RGD:2807 GO:GO:0019904 GO:GO:0043565
          Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0042593 GO:GO:0016568
          GO:GO:0005667 GO:GO:0003705 GO:GO:0001077 GO:GO:0000122 GO:GO:0008301
          GO:GO:0009790 GO:GO:0003690 GO:GO:0045666 GO:GO:0007389 GO:GO:0060740
          GO:GO:0060487 GO:GO:0048665 GO:GO:0051090 GO:GO:0010817 GO:GO:0060441
          GO:GO:0060741 eggNOG:COG5025 GO:GO:0060743 InterPro:IPR018533
          Pfam:PF09354 CTD:3169 HOGENOM:HOG000231817 HOVERGEN:HBG006621
          KO:K09387 GO:GO:0060738 GO:GO:0060528 EMBL:X55955 IPI:IPI00211811
          PIR:A36674 RefSeq:NP_036874.1 UniGene:Rn.10470
          ProteinModelPortal:P23512 SMR:P23512 STRING:P23512 PhosphoSite:P23512
          GeneID:25098 KEGG:rno:25098 UCSC:RGD:2807 NextBio:605405
          Genevestigator:P23512 GermOnline:ENSRNOG00000009284 Uniprot:P23512
        Length = 466

 Score = 112 (44.5 bits), Expect = 9.4e-06, P = 9.4e-06
 Identities = 21/43 (48%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FPYY QN  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   204 FPYYRQNQQRWQNSIRHSLSFNACFVKVARSPDKPGKGSYWTL 246


>UNIPROTKB|F1MNS7 [details] [associations]
            symbol:FOXA1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0060743 "epithelial cell maturation involved in
            prostate gland development" evidence=IEA] [GO:0060741 "prostate
            gland stromal morphogenesis" evidence=IEA] [GO:0060740 "prostate
            gland epithelium morphogenesis" evidence=IEA] [GO:0060738
            "epithelial-mesenchymal signaling involved in prostate gland
            development" evidence=IEA] [GO:0060528 "secretory columnal luminar
            epithelial cell differentiation involved in prostate glandular
            acinus development" evidence=IEA] [GO:0060487 "lung epithelial cell
            differentiation" evidence=IEA] [GO:0060441 "epithelial tube
            branching involved in lung morphogenesis" evidence=IEA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0048665 "neuron fate
            specification" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045931 "positive regulation of mitotic cell cycle"
            evidence=IEA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042593 "glucose
            homeostasis" evidence=IEA] [GO:0042445 "hormone metabolic process"
            evidence=IEA] [GO:0033148 "positive regulation of intracellular
            estrogen receptor signaling pathway" evidence=IEA] [GO:0032355
            "response to estradiol stimulus" evidence=IEA] [GO:0010719
            "negative regulation of epithelial to mesenchymal transition"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0019904 "protein domain specific binding" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0051091 GO:GO:0032355 GO:GO:0045931 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0042593 GO:GO:0006338 GO:GO:0044212 GO:GO:0045666
            GO:GO:0042445 GO:GO:0033148 GO:GO:0060740 GO:GO:0060487
            GO:GO:0048665 GO:GO:0060441 GO:GO:0010719 GO:GO:0060741
            GeneTree:ENSGT00700000104475 GO:GO:0060743 InterPro:IPR018533
            Pfam:PF09354 CTD:3169 KO:K09387 OMA:ALEPSYY GO:GO:0060738
            GO:GO:0060528 EMBL:DAAA02052774 IPI:IPI00923961
            RefSeq:NP_001192958.1 UniGene:Bt.88447 Ensembl:ENSBTAT00000061052
            GeneID:503579 KEGG:bta:503579 NextBio:20866216 Uniprot:F1MNS7
        Length = 468

 Score = 112 (44.5 bits), Expect = 9.5e-06, P = 9.5e-06
 Identities = 21/43 (48%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FPYY QN  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   204 FPYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTL 246


>UNIPROTKB|F1SHK8 [details] [associations]
            symbol:FOXA1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0060743 "epithelial cell maturation involved in
            prostate gland development" evidence=IEA] [GO:0060741 "prostate
            gland stromal morphogenesis" evidence=IEA] [GO:0060740 "prostate
            gland epithelium morphogenesis" evidence=IEA] [GO:0060738
            "epithelial-mesenchymal signaling involved in prostate gland
            development" evidence=IEA] [GO:0060528 "secretory columnal luminar
            epithelial cell differentiation involved in prostate glandular
            acinus development" evidence=IEA] [GO:0060487 "lung epithelial cell
            differentiation" evidence=IEA] [GO:0060441 "epithelial tube
            branching involved in lung morphogenesis" evidence=IEA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0048665 "neuron fate
            specification" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045931 "positive regulation of mitotic cell cycle"
            evidence=IEA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042593 "glucose
            homeostasis" evidence=IEA] [GO:0042445 "hormone metabolic process"
            evidence=IEA] [GO:0033148 "positive regulation of intracellular
            estrogen receptor signaling pathway" evidence=IEA] [GO:0032355
            "response to estradiol stimulus" evidence=IEA] [GO:0010719
            "negative regulation of epithelial to mesenchymal transition"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0019904 "protein domain specific binding" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0051091 GO:GO:0032355 GO:GO:0045931 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0042593 GO:GO:0006338 GO:GO:0044212 GO:GO:0045666
            GO:GO:0042445 GO:GO:0033148 GO:GO:0060740 GO:GO:0060487
            GO:GO:0048665 GO:GO:0060441 GO:GO:0010719 GO:GO:0060741
            GeneTree:ENSGT00700000104475 GO:GO:0060743 InterPro:IPR018533
            Pfam:PF09354 CTD:3169 KO:K09387 OMA:ALEPSYY GO:GO:0060738
            GO:GO:0060528 EMBL:CT737389 RefSeq:XP_001929311.1 UniGene:Ssc.61132
            Ensembl:ENSSSCT00000002172 GeneID:100156502 KEGG:ssc:100156502
            Uniprot:F1SHK8
        Length = 468

 Score = 112 (44.5 bits), Expect = 9.5e-06, P = 9.5e-06
 Identities = 21/43 (48%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FPYY QN  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   203 FPYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTL 245


>MGI|MGI:1347472 [details] [associations]
            symbol:Foxa1 "forkhead box A1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;IBA;IMP] [GO:0001077 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=ISO] [GO:0003677 "DNA
            binding" evidence=ISO;IDA] [GO:0003690 "double-stranded DNA
            binding" evidence=ISO;IBA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISO;IDA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
            factor complex" evidence=IBA] [GO:0006338 "chromatin remodeling"
            evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=ISO;IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0010468
            "regulation of gene expression" evidence=IGI] [GO:0010719 "negative
            regulation of epithelial to mesenchymal transition" evidence=ISO]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0019904
            "protein domain specific binding" evidence=ISO;IBA] [GO:0030324
            "lung development" evidence=IGI] [GO:0032355 "response to estradiol
            stimulus" evidence=ISO] [GO:0033148 "positive regulation of
            intracellular estrogen receptor signaling pathway" evidence=ISO]
            [GO:0035239 "tube morphogenesis" evidence=IMP] [GO:0042445 "hormone
            metabolic process" evidence=IMP] [GO:0042593 "glucose homeostasis"
            evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO;IDA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=ISO] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IGI;IMP] [GO:0045931 "positive regulation
            of mitotic cell cycle" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO;IGI;IDA] [GO:0048665 "neuron fate specification"
            evidence=IGI] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=ISO] [GO:0060441 "epithelial tube
            branching involved in lung morphogenesis" evidence=IGI] [GO:0060487
            "lung epithelial cell differentiation" evidence=IGI] [GO:0060528
            "secretory columnal luminar epithelial cell differentiation
            involved in prostate glandular acinus development" evidence=IMP]
            [GO:0060738 "epithelial-mesenchymal signaling involved in prostate
            gland development" evidence=IGI] [GO:0060740 "prostate gland
            epithelium morphogenesis" evidence=IMP] [GO:0060741 "prostate gland
            stromal morphogenesis" evidence=IMP] [GO:0060743 "epithelial cell
            maturation involved in prostate gland development" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 MGI:MGI:1347472
            GO:GO:0019904 GO:GO:0051091 GO:GO:0032355 GO:GO:0045931
            GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0042593 GO:GO:0005667 GO:GO:0003705 GO:GO:0006338
            GO:GO:0000122 GO:GO:0008301 GO:GO:0009790 GO:GO:0044212
            GO:GO:0003690 GO:GO:0045666 GO:GO:0008134 GO:GO:0042445
            GO:GO:0007389 GO:GO:0033148 GO:GO:0060740 GO:GO:0060487
            GO:GO:0048665 GO:GO:0051090 GO:GO:0060441 GO:GO:0010719
            GO:GO:0060741 eggNOG:COG5025 GeneTree:ENSGT00700000104475
            GO:GO:0060743 InterPro:IPR018533 Pfam:PF09354 CTD:3169
            HOGENOM:HOG000231817 HOVERGEN:HBG006621 KO:K09387 OMA:ALEPSYY
            GO:GO:0060738 GO:GO:0060528 EMBL:X74936 EMBL:U44752 EMBL:BC096524
            IPI:IPI00310116 PIR:A54258 RefSeq:NP_032285.2 UniGene:Mm.4578
            ProteinModelPortal:P35582 SMR:P35582 STRING:P35582
            PhosphoSite:P35582 PRIDE:P35582 Ensembl:ENSMUST00000044380
            GeneID:15375 KEGG:mmu:15375 UCSC:uc007nps.1 InParanoid:Q4VA63
            OrthoDB:EOG466VMM NextBio:288026 Bgee:P35582 CleanEx:MM_FOXA1
            Genevestigator:P35582 GermOnline:ENSMUSG00000035451 Uniprot:P35582
        Length = 468

 Score = 112 (44.5 bits), Expect = 9.5e-06, P = 9.5e-06
 Identities = 21/43 (48%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FPYY QN  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   204 FPYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTL 246


>UNIPROTKB|Q4H3I3 [details] [associations]
            symbol:Ci-FoxJ2 "Transcription factor protein" species:7719
            "Ciona intestinalis" [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0019904 "protein domain specific
            binding" evidence=IBA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IBA] [GO:0048513 "organ
            development" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0019904 GO:GO:0045893 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 GO:GO:0048513 eggNOG:COG5025
            GO:GO:0009888 CTD:55810 HOGENOM:HOG000231184 KO:K09403
            EMBL:AB210439 RefSeq:NP_001071714.1 UniGene:Cin.31124
            ProteinModelPortal:Q4H3I3 SMR:Q4H3I3 GeneID:778617 KEGG:cin:778617
            InParanoid:Q4H3I3 Uniprot:Q4H3I3
        Length = 560

 Score = 113 (44.8 bits), Expect = 9.5e-06, P = 9.5e-06
 Identities = 27/61 (44%), Positives = 32/61 (52%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNLSDMEPVEDASKSNWVSI 73
             FPYY+     WKNS+RHNLS+N  F K  +A    G G  W + D  P ED   S    I
Sbjct:   110 FPYYSGAGTGWKNSIRHNLSLNKCFMKVPRAKDDPGKGSYWAI-DSNPQEDPILSRPRGI 168

Query:    74 K 74
             K
Sbjct:   169 K 169


>UNIPROTKB|P55317 [details] [associations]
            symbol:FOXA1 "Hepatocyte nuclear factor 3-alpha"
            species:9606 "Homo sapiens" [GO:0042445 "hormone metabolic process"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0010817
            "regulation of hormone levels" evidence=IBA] [GO:0019904 "protein
            domain specific binding" evidence=IBA] [GO:0042593 "glucose
            homeostasis" evidence=IBA] [GO:0045666 "positive regulation of
            neuron differentiation" evidence=IBA] [GO:0048665 "neuron fate
            specification" evidence=IBA] [GO:0060441 "epithelial tube branching
            involved in lung morphogenesis" evidence=IBA] [GO:0060487 "lung
            epithelial cell differentiation" evidence=IBA] [GO:0060528
            "secretory columnal luminar epithelial cell differentiation
            involved in prostate glandular acinus development" evidence=IBA]
            [GO:0060738 "epithelial-mesenchymal signaling involved in prostate
            gland development" evidence=IBA] [GO:0060740 "prostate gland
            epithelium morphogenesis" evidence=IBA] [GO:0060741 "prostate gland
            stromal morphogenesis" evidence=IBA] [GO:0060743 "epithelial cell
            maturation involved in prostate gland development" evidence=IBA]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP;IDA]
            [GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IMP] [GO:0045931 "positive regulation of
            mitotic cell cycle" evidence=IMP] [GO:0033148 "positive regulation
            of intracellular estrogen receptor signaling pathway" evidence=IMP]
            [GO:0032355 "response to estradiol stimulus" evidence=IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=TAS] [GO:0001077 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in positive regulation of
            transcription" evidence=ISS] [GO:0010719 "negative regulation of
            epithelial to mesenchymal transition" evidence=IMP] [GO:2000049
            "positive regulation of cell-cell adhesion mediated by cadherin"
            evidence=IC] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0019904 GO:GO:0051091 GO:GO:0032355 GO:GO:0045931
            GO:GO:0043565 Pathway_Interaction_DB:hnf3apathway GO:GO:2000049
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0042593
            Pathway_Interaction_DB:hnf3bpathway GO:GO:0005667 GO:GO:0003705
            GO:GO:0001077 GO:GO:0006338 GO:GO:0008301 GO:GO:0009790
            GO:GO:0044212 EMBL:CH471078 GO:GO:0003690 GO:GO:0045666
            GO:GO:0008134 GO:GO:0042445 GO:GO:0007389 GO:GO:0033148
            GO:GO:0060740 GO:GO:0060487 GO:GO:0048665 GO:GO:0010817
            GO:GO:0060441 GO:GO:0010719 GO:GO:0060741 eggNOG:COG5025
            GO:GO:0060743 InterPro:IPR018533 Pfam:PF09354 EMBL:U39840
            EMBL:AF176112 EMBL:AF176111 EMBL:AF303743 EMBL:AF303742
            EMBL:AK313785 EMBL:AL121790 EMBL:BC033890 IPI:IPI01014973
            PIR:S70357 RefSeq:NP_004487.2 UniGene:Hs.163484
            ProteinModelPortal:P55317 SMR:P55317 DIP:DIP-57138N IntAct:P55317
            MINT:MINT-2804254 STRING:P55317 PhosphoSite:P55317 DMDM:296434509
            PaxDb:P55317 PRIDE:P55317 DNASU:3169 Ensembl:ENST00000250448
            GeneID:3169 KEGG:hsa:3169 UCSC:uc001wuf.3 CTD:3169
            GeneCards:GC14M038059 H-InvDB:HIX0011609 HGNC:HGNC:5021
            HPA:CAB011595 MIM:602294 neXtProt:NX_P55317 PharmGKB:PA201090
            HOGENOM:HOG000231817 HOVERGEN:HBG006621 InParanoid:P55317 KO:K09387
            OMA:ALEPSYY OrthoDB:EOG4C2HCT PhylomeDB:P55317
            Pathway_Interaction_DB:hnf3pathway ChiTaRS:FOXA1 GenomeRNAi:3169
            NextBio:12564 ArrayExpress:P55317 Bgee:P55317 CleanEx:HS_FOXA1
            Genevestigator:P55317 GO:GO:0060738 GO:GO:0060528 Uniprot:P55317
        Length = 472

 Score = 112 (44.5 bits), Expect = 9.6e-06, P = 9.6e-06
 Identities = 21/43 (48%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FPYY QN  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   204 FPYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTL 246


>UNIPROTKB|F6UTY3 [details] [associations]
            symbol:FOXA1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0019904 "protein domain specific binding"
            evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GeneTree:ENSGT00700000104475 InterPro:IPR018533
            Pfam:PF09354 OMA:ALEPSYY Ensembl:ENSCAFT00000021805
            EMBL:AAEX03005682 EMBL:AAEX03005683 Uniprot:F6UTY3
        Length = 481

 Score = 112 (44.5 bits), Expect = 9.9e-06, P = 9.9e-06
 Identities = 21/43 (48%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FPYY QN  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   204 FPYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTL 246


>FB|FBgn0004898 [details] [associations]
            symbol:fd96Cb "forkhead domain 96Cb" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0009790 "embryo development" evidence=IBA;NAS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0048806 "genitalia development" evidence=IBA] [GO:0007389
            "pattern specification process" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0051090 "regulation
            of sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0048813 "dendrite
            morphogenesis" evidence=IBA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            EMBL:AE014297 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0048806 GO:GO:0008301
            GO:GO:0009790 GO:GO:0048813 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 eggNOG:COG5025 GO:GO:0009888 KO:K09411
            GeneTree:ENSGT00700000104135 EMBL:BT028866 EMBL:M96444 PIR:E46178
            RefSeq:NP_524496.1 UniGene:Dm.24089 ProteinModelPortal:P32029
            SMR:P32029 STRING:P32029 EnsemblMetazoa:FBtr0084771 GeneID:43011
            KEGG:dme:Dmel_CG11922 CTD:43011 FlyBase:FBgn0004898
            InParanoid:P32029 OMA:NTEMVTH OrthoDB:EOG4GF1WZ PhylomeDB:P32029
            GenomeRNAi:43011 NextBio:831800 Bgee:P32029 GermOnline:CG11922
            Uniprot:P32029
        Length = 271

 Score = 108 (43.1 bits), Expect = 9.9e-06, P = 9.9e-06
 Identities = 21/51 (41%), Positives = 29/51 (56%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNLSDM 59
             F  ++FP+Y +N  +W+NS+RHNLS N  F K  +     G G  W L  M
Sbjct:    42 FIMDQFPFYRKNTQKWQNSLRHNLSFNDCFIKVPRNVTKAGKGSYWTLHPM 92


>UNIPROTKB|Q9PVZ3 [details] [associations]
            symbol:foxc1-a "Forkhead box protein C1-A" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0006351 "transcription,
            DNA-dependent" evidence=IMP] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IMP] [GO:0007155 "cell
            adhesion" evidence=IMP] [GO:0007498 "mesoderm development"
            evidence=IMP] [GO:0048793 "pronephros development" evidence=IEP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0006355 GO:GO:0007498 GO:GO:0003677
            GO:GO:0043565 GO:GO:0007155 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0048793 HSSP:Q99958
            HOVERGEN:HBG051640 EMBL:AF116844 EMBL:AJ242675 EMBL:BC169731
            EMBL:BC169733 EMBL:BC170199 EMBL:BC170201 RefSeq:NP_001080937.1
            RefSeq:NP_001081683.1 UniGene:Xl.180 UniGene:Xl.34915
            ProteinModelPortal:Q9PVZ3 SMR:Q9PVZ3 GeneID:394280 GeneID:397996
            KEGG:xla:394280 KEGG:xla:397996 CTD:394280 Xenbase:XB-GENE-6252135
            Uniprot:Q9PVZ3
        Length = 492

 Score = 112 (44.5 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 24/56 (42%), Positives = 31/56 (55%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             +T N    F  ERFP+Y  N   W+NS+RHNLS+N  F K  +  +  G G  W L
Sbjct:   100 ITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 155


>UNIPROTKB|Q32NP8 [details] [associations]
            symbol:foxc1-b "Forkhead box protein C1-B" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0006351 "transcription,
            DNA-dependent" evidence=ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0007155 "cell
            adhesion" evidence=ISS] [GO:0007498 "mesoderm development"
            evidence=ISS] [GO:0048793 "pronephros development" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0006355 GO:GO:0007498 GO:GO:0003677
            GO:GO:0043565 GO:GO:0007155 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0048793 KO:K09396
            HOVERGEN:HBG051640 EMBL:BC108535 RefSeq:NP_001089846.1
            UniGene:Xl.76079 ProteinModelPortal:Q32NP8 SMR:Q32NP8 GeneID:734912
            KEGG:xla:734912 CTD:734912 Xenbase:XB-GENE-865236 Uniprot:Q32NP8
        Length = 495

 Score = 112 (44.5 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 24/56 (42%), Positives = 31/56 (55%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             +T N    F  ERFP+Y  N   W+NS+RHNLS+N  F K  +  +  G G  W L
Sbjct:   100 ITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 155


>UNIPROTKB|Q68F77 [details] [associations]
            symbol:foxc1 "Forkhead box protein C1" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0001503 "ossification"
            evidence=IBA] [GO:0001541 "ovarian follicle development"
            evidence=IBA] [GO:0001570 "vasculogenesis" evidence=IBA]
            [GO:0001656 "metanephros development" evidence=IBA] [GO:0001657
            "ureteric bud development" evidence=IBA] [GO:0001756
            "somitogenesis" evidence=IBA] [GO:0001946 "lymphangiogenesis"
            evidence=IBA] [GO:0001974 "blood vessel remodeling" evidence=IBA]
            [GO:0003677 "DNA binding" evidence=ISS] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0007155 "cell adhesion"
            evidence=ISS] [GO:0007219 "Notch signaling pathway" evidence=IBA]
            [GO:0007420 "brain development" evidence=IBA] [GO:0007498 "mesoderm
            development" evidence=ISS] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0008354 "germ cell migration" evidence=IBA]
            [GO:0014034 "neural crest cell fate commitment" evidence=IBA]
            [GO:0030199 "collagen fibril organization" evidence=IBA]
            [GO:0030203 "glycosaminoglycan metabolic process" evidence=IBA]
            [GO:0031490 "chromatin DNA binding" evidence=IBA] [GO:0032808
            "lacrimal gland development" evidence=IBA] [GO:0035050 "embryonic
            heart tube development" evidence=IBA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IBA] [GO:0043010 "camera-type eye
            development" evidence=IBA] [GO:0045930 "negative regulation of
            mitotic cell cycle" evidence=IBA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0046620 "regulation of organ growth" evidence=IBA] [GO:0048010
            "vascular endothelial growth factor receptor signaling pathway"
            evidence=IBA] [GO:0048343 "paraxial mesodermal cell fate
            commitment" evidence=IBA] [GO:0048793 "pronephros development"
            evidence=ISS] [GO:0048844 "artery morphogenesis" evidence=IBA]
            [GO:0050880 "regulation of blood vessel size" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0055010
            "ventricular cardiac muscle tissue morphogenesis" evidence=IBA]
            [GO:0060038 "cardiac muscle cell proliferation" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0007420 GO:GO:0043565 GO:GO:0030199 GO:GO:0045944
            GO:GO:0007155 GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0001756
            GO:GO:0043010 GO:GO:0001974 GO:GO:0003690 GO:GO:0001541
            GO:GO:0001946 GO:GO:0001570 GO:GO:0042475 GO:GO:0008134
            GO:GO:0050880 GO:GO:0001503 GO:GO:0048844 GO:GO:0031490
            GO:GO:0001656 GO:GO:0001657 GO:GO:0051090 GO:GO:0046620
            GO:GO:0048010 GO:GO:0045930 GO:GO:0060038 GO:GO:0055010
            GO:GO:0048793 GO:GO:0030203 eggNOG:COG5025 KO:K09396 GO:GO:0035050
            GO:GO:0008354 GeneTree:ENSGT00690000101636 GO:GO:0032808 CTD:2296
            HOVERGEN:HBG051640 GO:GO:0014034 GO:GO:0048343 HOGENOM:HOG000007939
            EMBL:BC079966 RefSeq:NP_001007864.1 UniGene:Str.6156
            ProteinModelPortal:Q68F77 SMR:Q68F77 Ensembl:ENSXETT00000001313
            GeneID:493250 KEGG:xtr:493250 Xenbase:XB-GENE-479055
            InParanoid:Q68F77 OrthoDB:EOG4MCX19 Bgee:Q68F77 Uniprot:Q68F77
        Length = 495

 Score = 112 (44.5 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 24/56 (42%), Positives = 31/56 (55%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             +T N    F  ERFP+Y  N   W+NS+RHNLS+N  F K  +  +  G G  W L
Sbjct:   100 ITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 155


>UNIPROTKB|F1NNS0 [details] [associations]
            symbol:FOXK2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0000287 "magnesium ion binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000253 InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF00498 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50006 PROSITE:PS50039 SMART:SM00240
            SMART:SM00339 GO:GO:0005634 GO:GO:0000287 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            Gene3D:2.60.200.20 GeneTree:ENSGT00700000104094 EMBL:AADN02029895
            EMBL:AADN02029896 EMBL:AADN02029897 IPI:IPI00584785
            Ensembl:ENSGALT00000002396 Uniprot:F1NNS0
        Length = 630

 Score = 113 (44.8 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 40/133 (30%), Positives = 61/133 (45%)

Query:     3 LTANLRLFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL--- 56
             LT N  ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +   
Sbjct:   249 LTLN-GIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPA 307

Query:    57 SDMEPVEDASKSNWVSIKVTGVK--RTGWLAFGYYSERPKYDMLNTSGVLRTCMCNSNET 114
             S+ + +E A +      +  GV   RT     G  S R      N SGVL          
Sbjct:   308 SESKLIEQAFRKR----RPRGVPCFRT---PLGPLSSRSAPASPNHSGVLSAHSSGVQTP 360

Query:   115 YMLCRKCKGMPVQ 127
               L R+   +P++
Sbjct:   361 ESLSREGSPVPME 373


>UNIPROTKB|F1NK01 [details] [associations]
            symbol:Gga.51501 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 EMBL:AADN02042527 EMBL:AADN02064686
            EMBL:AADN02064687 IPI:IPI00819927 Ensembl:ENSGALT00000037131
            ArrayExpress:F1NK01 Uniprot:F1NK01
        Length = 444

 Score = 111 (44.1 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 23/56 (41%), Positives = 32/56 (57%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             +T N    F  +RFP+Y +N   W+NS+RHNLS+N  F K  +  +  G G  W L
Sbjct:    60 ITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 115


>UNIPROTKB|Q7T269 [details] [associations]
            symbol:FoxL2 "Forkhead transcription factor L2"
            species:9031 "Gallus gallus" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0002074 "extraocular skeletal muscle development"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006309 "apoptotic DNA fragmentation"
            evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
            [GO:0019101 "female somatic sex determination" evidence=IEA]
            [GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0031624
            "ubiquitin conjugating enzyme binding" evidence=IEA] [GO:0042703
            "menstruation" evidence=IEA] [GO:0043028 "cysteine-type
            endopeptidase regulator activity involved in apoptotic process"
            evidence=IEA] [GO:0043280 "positive regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0048048
            "embryonic eye morphogenesis" evidence=IEA] [GO:0060014 "granulosa
            cell differentiation" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0045892 GO:GO:0006917 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0043280 GO:GO:0006309 GO:GO:0060014 HSSP:Q99958
            GeneTree:ENSGT00700000104135 GO:GO:0043028 EMBL:AADN02024206
            UniGene:Gga.7539 EMBL:AY155534 IPI:IPI00821727 STRING:Q7T269
            Ensembl:ENSGALT00000040961 HOGENOM:HOG000198402 HOVERGEN:HBG098671
            InParanoid:Q7T269 Uniprot:Q7T269
        Length = 110

 Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 24/60 (40%), Positives = 34/60 (56%)

Query:    15 RFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA--GHLWNLSDMEPV-EDA-SKSNW 70
             +FP+Y +N   W+NS+RHNLS+N  F K  +   G   G+ W L   +P  ED   K N+
Sbjct:    34 KFPFYEKNKKGWQNSIRHNLSLNECFIKVPREGGGERKGNYWTL---DPACEDMFEKGNY 90


>RGD|621716 [details] [associations]
            symbol:Foxd4 "forkhead box D4" species:10116 "Rattus norvegicus"
            [GO:0001755 "neural crest cell migration" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0030318
            "melanocyte differentiation" evidence=IBA] [GO:0030513 "positive
            regulation of BMP signaling pathway" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0048484 "enteric nervous system development"
            evidence=IBA] [GO:0048485 "sympathetic nervous system development"
            evidence=IBA] [GO:0048846 "axon extension involved in axon
            guidance" evidence=IBA] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IBA] [GO:0050935 "iridophore differentiation"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0051216
            "cartilage development" evidence=IBA] [GO:0060678 "dichotomous
            subdivision of terminal units involved in ureteric bud branching"
            evidence=IBA] [GO:0090184 "positive regulation of kidney
            development" evidence=IBA] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            RGD:621716 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0030513
            GO:GO:0051216 GO:GO:0008134 GO:GO:0007389 GO:GO:0048485
            GO:GO:0030318 GO:GO:0048484 GO:GO:0051090 GO:GO:0090184
            GO:GO:0048846 eggNOG:COG5025 GO:GO:0048937 OrthoDB:EOG45MN6S
            GO:GO:0060678 GO:GO:0050935 EMBL:L13206 IPI:IPI00763560 PIR:I60920
            UniGene:Rn.198192 ProteinModelPortal:Q63249 SMR:Q63249
            PhosphoSite:Q63249 Ensembl:ENSRNOT00000066752 UCSC:RGD:621716
            HOGENOM:HOG000198507 Genevestigator:Q63249 Uniprot:Q63249
        Length = 101

 Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 20/44 (45%), Positives = 27/44 (61%)

Query:    15 RFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
             RFPYY +    W+NS+RHNLS+N  F K  +     G G+ W+L
Sbjct:    36 RFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSL 79


>UNIPROTKB|Q6NVT7 [details] [associations]
            symbol:foxc2 "Forkhead box protein C2" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0001503 "ossification"
            evidence=IBA] [GO:0001569 "patterning of blood vessels"
            evidence=IBA] [GO:0001570 "vasculogenesis" evidence=IBA]
            [GO:0001656 "metanephros development" evidence=IBA] [GO:0001657
            "ureteric bud development" evidence=IBA] [GO:0001756
            "somitogenesis" evidence=IBA] [GO:0001946 "lymphangiogenesis"
            evidence=ISS;IBA] [GO:0001974 "blood vessel remodeling"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007219 "Notch
            signaling pathway" evidence=IBA] [GO:0007498 "mesoderm development"
            evidence=ISS] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008286 "insulin receptor signaling pathway"
            evidence=ISS;IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009725 "response to hormone stimulus" evidence=ISS]
            [GO:0014034 "neural crest cell fate commitment" evidence=IBA]
            [GO:0030199 "collagen fibril organization" evidence=IBA]
            [GO:0031490 "chromatin DNA binding" evidence=ISS;IBA] [GO:0035050
            "embryonic heart tube development" evidence=IBA] [GO:0043010
            "camera-type eye development" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0046620 "regulation of
            organ growth" evidence=IBA] [GO:0048010 "vascular endothelial
            growth factor receptor signaling pathway" evidence=IBA] [GO:0048343
            "paraxial mesodermal cell fate commitment" evidence=IBA]
            [GO:0048703 "embryonic viscerocranium morphogenesis" evidence=IBA]
            [GO:0048844 "artery morphogenesis" evidence=IBA] [GO:0050880
            "regulation of blood vessel size" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0055010 "ventricular cardiac muscle
            tissue morphogenesis" evidence=IBA] [GO:0060038 "cardiac muscle
            cell proliferation" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0008286
            GO:GO:0043565 GO:GO:0030199 GO:GO:0045944 GO:GO:0007219
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0001756 GO:GO:0043010 GO:GO:0001974
            GO:GO:0003690 GO:GO:0001946 GO:GO:0001569 GO:GO:0001570
            GO:GO:0008134 GO:GO:0050880 GO:GO:0001503 GO:GO:0048844
            GO:GO:0031490 GO:GO:0001656 GO:GO:0001657 GO:GO:0051090
            GO:GO:0046620 GO:GO:0048010 GO:GO:0060038 GO:GO:0055010
            GO:GO:0048703 eggNOG:COG5025 KO:K09396 GO:GO:0035050 HSSP:Q99958
            GeneTree:ENSGT00690000101636 HOVERGEN:HBG051640 GO:GO:0014034
            GO:GO:0048343 HOGENOM:HOG000007939 OrthoDB:EOG4MCX19 CTD:2303
            EMBL:CR762327 EMBL:BC067916 RefSeq:NP_998857.1 UniGene:Str.2696
            ProteinModelPortal:Q6NVT7 SMR:Q6NVT7 STRING:Q6NVT7
            Ensembl:ENSXETT00000035768 GeneID:407875 KEGG:xtr:407875
            Xenbase:XB-GENE-481382 InParanoid:Q6NVT7 OMA:ARYSVAD Bgee:Q6NVT7
            Uniprot:Q6NVT7
        Length = 464

 Score = 111 (44.1 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 23/56 (41%), Positives = 32/56 (57%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             +T N    F  +RFP+Y +N   W+NS+RHNLS+N  F K  +  +  G G  W L
Sbjct:    93 ITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 148


>WB|WBGene00003017 [details] [associations]
            symbol:lin-31 species:6239 "Caenorhabditis elegans"
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0040027 "negative regulation of
            vulval development" evidence=IMP] [GO:0040018 "positive regulation
            of multicellular organism growth" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP] [GO:0040011
            "locomotion" evidence=IMP] [GO:0040015 "negative regulation of
            multicellular organism growth" evidence=IMP] [GO:0040025 "vulval
            development" evidence=IGI;IMP] [GO:0005634 "nucleus" evidence=IDA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0043565 GO:GO:0040011 GO:GO:0040018 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0009790 GO:GO:0040035 GO:GO:0003690 GO:GO:0040015
            GO:GO:0008134 GO:GO:0007389 GO:GO:0040025 GO:GO:0040027
            GO:GO:0051090 eggNOG:COG5025 GO:GO:0009888
            GeneTree:ENSGT00700000104135 EMBL:L11148 EMBL:FO081624 PIR:A47368
            RefSeq:NP_494704.1 ProteinModelPortal:P34683 SMR:P34683
            IntAct:P34683 MINT:MINT-116445 STRING:P34683 EnsemblMetazoa:K10G6.1
            GeneID:173740 KEGG:cel:CELE_K10G6.1 UCSC:K10G6.1 CTD:173740
            WormBase:K10G6.1 InParanoid:P34683 OMA:GMFENGS NextBio:880883
            Uniprot:P34683
        Length = 237

 Score = 106 (42.4 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 20/43 (46%), Positives = 27/43 (62%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLW 54
             +RFP+Y +N  RW+NS+RHNLS N  F K  + +   G G  W
Sbjct:    45 DRFPFYRKNTQRWQNSLRHNLSFNDCFIKIPRRADRPGKGSYW 87


>UNIPROTKB|P34683 [details] [associations]
            symbol:lin-31 "Protein lin-31" species:6239 "Caenorhabditis
            elegans" [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0043565 GO:GO:0040011 GO:GO:0040018 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0009790 GO:GO:0040035 GO:GO:0003690 GO:GO:0040015
            GO:GO:0008134 GO:GO:0007389 GO:GO:0040025 GO:GO:0040027
            GO:GO:0051090 eggNOG:COG5025 GO:GO:0009888
            GeneTree:ENSGT00700000104135 EMBL:L11148 EMBL:FO081624 PIR:A47368
            RefSeq:NP_494704.1 ProteinModelPortal:P34683 SMR:P34683
            IntAct:P34683 MINT:MINT-116445 STRING:P34683 EnsemblMetazoa:K10G6.1
            GeneID:173740 KEGG:cel:CELE_K10G6.1 UCSC:K10G6.1 CTD:173740
            WormBase:K10G6.1 InParanoid:P34683 OMA:GMFENGS NextBio:880883
            Uniprot:P34683
        Length = 237

 Score = 106 (42.4 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 20/43 (46%), Positives = 27/43 (62%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLW 54
             +RFP+Y +N  RW+NS+RHNLS N  F K  + +   G G  W
Sbjct:    45 DRFPFYRKNTQRWQNSLRHNLSFNDCFIKIPRRADRPGKGSYW 87


>UNIPROTKB|F1NK00 [details] [associations]
            symbol:Gga.51501 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0001077 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=IEA] [GO:0001503
            "ossification" evidence=IEA] [GO:0001569 "patterning of blood
            vessels" evidence=IEA] [GO:0001656 "metanephros development"
            evidence=IEA] [GO:0001657 "ureteric bud development" evidence=IEA]
            [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001946
            "lymphangiogenesis" evidence=IEA] [GO:0001974 "blood vessel
            remodeling" evidence=IEA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0008286
            "insulin receptor signaling pathway" evidence=IEA] [GO:0014032
            "neural crest cell development" evidence=IEA] [GO:0030199 "collagen
            fibril organization" evidence=IEA] [GO:0031490 "chromatin DNA
            binding" evidence=IEA] [GO:0033630 "positive regulation of cell
            adhesion mediated by integrin" evidence=IEA] [GO:0035050 "embryonic
            heart tube development" evidence=IEA] [GO:0035470 "positive
            regulation of vascular wound healing" evidence=IEA] [GO:0043010
            "camera-type eye development" evidence=IEA] [GO:0043066 "negative
            regulation of apoptotic process" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0046620 "regulation of organ growth" evidence=IEA] [GO:0048010
            "vascular endothelial growth factor receptor signaling pathway"
            evidence=IEA] [GO:0048343 "paraxial mesodermal cell fate
            commitment" evidence=IEA] [GO:0048703 "embryonic viscerocranium
            morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
            evidence=IEA] [GO:0050880 "regulation of blood vessel size"
            evidence=IEA] [GO:0055010 "ventricular cardiac muscle tissue
            morphogenesis" evidence=IEA] [GO:0060038 "cardiac muscle cell
            proliferation" evidence=IEA] [GO:0072011 "glomerular endothelium
            development" evidence=IEA] [GO:0072112 "glomerular visceral
            epithelial cell differentiation" evidence=IEA] [GO:0072144
            "glomerular mesangial cell development" evidence=IEA] [GO:0090050
            "positive regulation of cell migration involved in sprouting
            angiogenesis" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0008286
            GO:GO:0008283 GO:GO:0043565 GO:GO:0030199 GO:GO:0007219
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003705 GO:GO:0001077
            GO:GO:0000122 GO:GO:0044212 GO:GO:0033630 GO:GO:0031490
            GO:GO:0046620 GO:GO:0048010 GeneTree:ENSGT00690000101636
            OMA:LNHLPGH GO:GO:0090050 GO:GO:0035470 EMBL:AADN02042527
            EMBL:AADN02064686 EMBL:AADN02064687 IPI:IPI00592388
            Ensembl:ENSGALT00000037132 ArrayExpress:F1NK00 Uniprot:F1NK00
        Length = 467

 Score = 111 (44.1 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 23/56 (41%), Positives = 32/56 (57%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             +T N    F  +RFP+Y +N   W+NS+RHNLS+N  F K  +  +  G G  W L
Sbjct:    94 ITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 149


>UNIPROTKB|Q6Q2B1 [details] [associations]
            symbol:foxk1 "Forkhead box protein K1 isoform alpha"
            species:31033 "Takifugu rubripes" [GO:0000287 "magnesium ion
            binding" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] InterPro:IPR000253 InterPro:IPR001766
            InterPro:IPR008984 InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006
            PROSITE:PS50039 SMART:SM00240 SMART:SM00339 GO:GO:0000287
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 GO:GO:0009888 HSSP:Q01167
            HOGENOM:HOG000072588 EMBL:AY566278 UniGene:Tru.2000
            ProteinModelPortal:Q6Q2B1 InParanoid:Q6Q2B1 Uniprot:Q6Q2B1
        Length = 558

 Score = 112 (44.5 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 24/63 (38%), Positives = 36/63 (57%)

Query:     9 LFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL---SDMEPV 62
             ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++    G G  W L   S+ + V
Sbjct:   313 IYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFLKVARSQDEPGKGSFWRLDSASESKLV 372

Query:    63 EDA 65
             E A
Sbjct:   373 EQA 375


>UNIPROTKB|J9P4F9 [details] [associations]
            symbol:FOXK2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104094 Ensembl:ENSCAFT00000044110
            Uniprot:J9P4F9
        Length = 471

 Score = 111 (44.1 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 25/69 (36%), Positives = 40/69 (57%)

Query:     3 LTANLRLFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL--- 56
             LT N  ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +   
Sbjct:    90 LTLN-GIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPA 148

Query:    57 SDMEPVEDA 65
             S+ + +E A
Sbjct:   149 SESKLIEQA 157


>ZFIN|ZDB-GENE-010302-1 [details] [associations]
            symbol:foxc1a "forkhead box C1a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043114 "regulation of vascular
            permeability" evidence=IGI] [GO:0061386 "closure of optic fissure"
            evidence=IMP] [GO:0001568 "blood vessel development" evidence=IGI]
            [GO:0043010 "camera-type eye development" evidence=IGI] [GO:0001756
            "somitogenesis" evidence=IMP] [GO:0001944 "vasculature development"
            evidence=IGI;IMP] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0039021 "pronephric glomerulus
            development" evidence=IGI] [GO:0072149 "glomerular visceral
            epithelial cell fate commitment" evidence=IGI] [GO:0030325 "adrenal
            gland development" evidence=IGI] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-010302-1 GO:GO:0005634 GO:GO:0030325 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0001756 GO:GO:0001568 KO:K09396 HSSP:Q99958
            GeneTree:ENSGT00690000101636 HOVERGEN:HBG051640
            HOGENOM:HOG000007939 EMBL:CU929125 EMBL:AF219949 EMBL:BC053129
            IPI:IPI00510932 RefSeq:NP_571803.1 UniGene:Dr.82483
            ProteinModelPortal:Q9DE25 SMR:Q9DE25 PRIDE:Q9DE25
            Ensembl:ENSDART00000122732 GeneID:100148408 KEGG:dre:100148408
            CTD:100148408 NextBio:20792036 Bgee:Q9DE25 GO:GO:0061386
            GO:GO:0072149 GO:GO:0039021 Uniprot:Q9DE25
        Length = 476

 Score = 111 (44.1 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  ERFP+Y  N   W+NS+RHNLS+N  F K  +  +  G G  W L
Sbjct:   103 FIMERFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 150


>RGD|1590042 [details] [associations]
            symbol:LOC688330 "similar to forkhead box K2 isoform 1"
            species:10116 "Rattus norvegicus" [GO:0000287 "magnesium ion
            binding" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0051090 "regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            InterPro:IPR000253 InterPro:IPR001766 InterPro:IPR008984
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006 PROSITE:PS50039
            SMART:SM00240 SMART:SM00339 RGD:1305408 RGD:1590042 GO:GO:0000287
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 GO:GO:0009888
            GeneTree:ENSGT00700000104094 IPI:IPI00361779
            Ensembl:ENSRNOT00000054919 ArrayExpress:D3ZY28 Uniprot:D3ZY28
        Length = 580

 Score = 112 (44.5 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 26/69 (37%), Positives = 40/69 (57%)

Query:     3 LTANLRLFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL--- 56
             LT N  ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +   
Sbjct:   270 LTLN-GIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPA 328

Query:    57 SDMEPVEDA 65
             S+ + VE A
Sbjct:   329 SESKLVEQA 337


>MGI|MGI:1347481 [details] [associations]
            symbol:Foxc2 "forkhead box C2" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0001077 "RNA polymerase
            II core promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in positive regulation of
            transcription" evidence=ISO] [GO:0001501 "skeletal system
            development" evidence=IGI;IMP] [GO:0001503 "ossification"
            evidence=IMP] [GO:0001568 "blood vessel development" evidence=IGI]
            [GO:0001569 "patterning of blood vessels" evidence=IGI] [GO:0001570
            "vasculogenesis" evidence=IBA] [GO:0001656 "metanephros
            development" evidence=IMP] [GO:0001657 "ureteric bud development"
            evidence=IMP] [GO:0001756 "somitogenesis" evidence=IGI] [GO:0001822
            "kidney development" evidence=IMP] [GO:0001945 "lymph vessel
            development" evidence=IGI] [GO:0001946 "lymphangiogenesis"
            evidence=ISO;ISS;IBA] [GO:0001974 "blood vessel remodeling"
            evidence=IGI] [GO:0003007 "heart morphogenesis" evidence=IGI]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISO;ISS;IDA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IGI] [GO:0005634 "nucleus" evidence=ISO;IC]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IGI]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007507 "heart development" evidence=ISO;IGI;IMP] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008283 "cell
            proliferation" evidence=IMP] [GO:0008286 "insulin receptor
            signaling pathway" evidence=ISO;ISS;IBA] [GO:0008301 "DNA binding,
            bending" evidence=IBA] [GO:0009725 "response to hormone stimulus"
            evidence=ISO;ISS] [GO:0010595 "positive regulation of endothelial
            cell migration" evidence=IDA] [GO:0014032 "neural crest cell
            development" evidence=IGI] [GO:0014034 "neural crest cell fate
            commitment" evidence=IBA] [GO:0030199 "collagen fibril
            organization" evidence=IMP] [GO:0031490 "chromatin DNA binding"
            evidence=ISO;ISS;IBA] [GO:0033625 "positive regulation of integrin
            activation" evidence=IC] [GO:0033630 "positive regulation of cell
            adhesion mediated by integrin" evidence=IDA] [GO:0035050 "embryonic
            heart tube development" evidence=IGI] [GO:0035470 "positive
            regulation of vascular wound healing" evidence=IDA] [GO:0043010
            "camera-type eye development" evidence=IMP] [GO:0043066 "negative
            regulation of apoptotic process" evidence=IGI] [GO:0043565
            "sequence-specific DNA binding" evidence=ISO;ISS] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO;ISS;IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0046620 "regulation of organ growth" evidence=IGI] [GO:0048010
            "vascular endothelial growth factor receptor signaling pathway"
            evidence=IGI] [GO:0048341 "paraxial mesoderm formation"
            evidence=IGI] [GO:0048343 "paraxial mesodermal cell fate
            commitment" evidence=IMP] [GO:0048701 "embryonic cranial skeleton
            morphogenesis" evidence=IMP] [GO:0048703 "embryonic viscerocranium
            morphogenesis" evidence=IMP] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IMP] [GO:0048844 "artery morphogenesis"
            evidence=IMP] [GO:0050880 "regulation of blood vessel size"
            evidence=IGI] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0055010
            "ventricular cardiac muscle tissue morphogenesis" evidence=IGI]
            [GO:0060038 "cardiac muscle cell proliferation" evidence=IGI]
            [GO:0072011 "glomerular endothelium development" evidence=IMP]
            [GO:0072112 "glomerular visceral epithelial cell differentiation"
            evidence=IMP] [GO:0072144 "glomerular mesangial cell development"
            evidence=IMP] [GO:0090050 "positive regulation of cell migration
            involved in sprouting angiogenesis" evidence=IDA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            MGI:MGI:1347481 GO:GO:0008286 GO:GO:0043066 GO:GO:0043565
            GO:GO:0030199 GO:GO:0045944 GO:GO:0007219 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0001077
            GO:GO:0000122 GO:GO:0008301 GO:GO:0001756 GO:GO:0043010
            GO:GO:0044212 GO:GO:0001974 GO:GO:0003690 GO:GO:0072144
            GO:GO:0001946 GO:GO:0001569 GO:GO:0033630 GO:GO:0001570
            GO:GO:0008134 GO:GO:0014032 GO:GO:0050880 GO:GO:0001503
            GO:GO:0048844 GO:GO:0031490 GO:GO:0001656 GO:GO:0001657
            GO:GO:0051090 GO:GO:0046620 GO:GO:0072112 GO:GO:0048010
            GO:GO:0060038 GO:GO:0055010 GO:GO:0033625 GO:GO:0072011
            GO:GO:0048703 eggNOG:COG5025 KO:K09396 GO:GO:0035050
            GeneTree:ENSGT00690000101636 HOVERGEN:HBG051640 GO:GO:0014034
            GO:GO:0048343 HOGENOM:HOG000007939 OrthoDB:EOG4MCX19 CTD:2303
            OMA:LNHLPGH GO:GO:0090050 GO:GO:0035470 EMBL:X92499 EMBL:Y08222
            EMBL:X74040 EMBL:AK076319 EMBL:S63607 IPI:IPI00126263 PIR:S34472
            RefSeq:NP_038547.2 UniGene:Mm.14092 ProteinModelPortal:Q61850
            SMR:Q61850 STRING:Q61850 PhosphoSite:Q61850 PRIDE:Q61850
            Ensembl:ENSMUST00000054691 GeneID:14234 KEGG:mmu:14234
            InParanoid:Q61850 NextBio:285515 Bgee:Q61850 CleanEx:MM_FOXC2
            Genevestigator:Q61850 GermOnline:ENSMUSG00000046714 Uniprot:Q61850
        Length = 494

 Score = 111 (44.1 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 23/56 (41%), Positives = 32/56 (57%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             +T N    F  +RFP+Y +N   W+NS+RHNLS+N  F K  +  +  G G  W L
Sbjct:    92 ITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 147


>UNIPROTKB|Q99958 [details] [associations]
            symbol:FOXC2 "Forkhead box protein C2" species:9606 "Homo
            sapiens" [GO:0014032 "neural crest cell development" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0072011 "glomerular endothelium development"
            evidence=IEA] [GO:0072112 "glomerular visceral epithelial cell
            differentiation" evidence=IEA] [GO:0072144 "glomerular mesangial
            cell development" evidence=IEA] [GO:0007507 "heart development"
            evidence=IMP] [GO:0007498 "mesoderm development" evidence=NAS]
            [GO:0001503 "ossification" evidence=IBA] [GO:0001569 "patterning of
            blood vessels" evidence=IBA] [GO:0001570 "vasculogenesis"
            evidence=IBA] [GO:0001656 "metanephros development" evidence=IBA]
            [GO:0001657 "ureteric bud development" evidence=IBA] [GO:0001756
            "somitogenesis" evidence=IBA] [GO:0001974 "blood vessel remodeling"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007219 "Notch signaling pathway" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0014034
            "neural crest cell fate commitment" evidence=IBA] [GO:0030199
            "collagen fibril organization" evidence=IBA] [GO:0035050 "embryonic
            heart tube development" evidence=IBA] [GO:0043010 "camera-type eye
            development" evidence=IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS;IBA]
            [GO:0046620 "regulation of organ growth" evidence=IBA] [GO:0048010
            "vascular endothelial growth factor receptor signaling pathway"
            evidence=IBA] [GO:0048343 "paraxial mesodermal cell fate
            commitment" evidence=IBA] [GO:0048703 "embryonic viscerocranium
            morphogenesis" evidence=IBA] [GO:0048844 "artery morphogenesis"
            evidence=IBA] [GO:0050880 "regulation of blood vessel size"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0055010
            "ventricular cardiac muscle tissue morphogenesis" evidence=IBA]
            [GO:0060038 "cardiac muscle cell proliferation" evidence=IBA]
            [GO:0001946 "lymphangiogenesis" evidence=IMP] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0008286 "insulin receptor signaling pathway" evidence=IDA]
            [GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0009725 "response
            to hormone stimulus" evidence=IDA] [GO:0001077 "RNA polymerase II
            core promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in positive regulation of
            transcription" evidence=IDA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0010595 "positive regulation of endothelial cell migration"
            evidence=ISS] [GO:0033630 "positive regulation of cell adhesion
            mediated by integrin" evidence=ISS] [GO:0035470 "positive
            regulation of vascular wound healing" evidence=ISS] [GO:0090050
            "positive regulation of cell migration involved in sprouting
            angiogenesis" evidence=ISS] [GO:0044212 "transcription regulatory
            region DNA binding" evidence=ISS] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0008286
            GO:GO:0043565 GO:GO:0030199 GO:GO:0007219 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0001077
            GO:GO:0000122 GO:GO:0008301 GO:GO:0001756 GO:GO:0043010
            GO:GO:0044212 GO:GO:0001974 GO:GO:0003690 GO:GO:0072144
            GO:GO:0001946 GO:GO:0001569 GO:GO:0033630 GO:GO:0001570
            GO:GO:0008134 GO:GO:0014032 GO:GO:0050880 GO:GO:0001503
            GO:GO:0048844 GO:GO:0031490 GO:GO:0001656 GO:GO:0001657
            GO:GO:0051090 GO:GO:0046620 GO:GO:0072112 GO:GO:0048010
            GO:GO:0060038 GO:GO:0055010 GO:GO:0072011 GO:GO:0048703
            eggNOG:COG5025 KO:K09396 GO:GO:0035050 HOVERGEN:HBG051640
            GO:GO:0014034 GO:GO:0048343 HOGENOM:HOG000007939 OrthoDB:EOG4MCX19
            EMBL:Y08223 EMBL:GQ282998 EMBL:BC113437 EMBL:BC113439
            IPI:IPI00019155 RefSeq:NP_005242.1 UniGene:Hs.740701 PDB:1D5V
            PDBsum:1D5V ProteinModelPortal:Q99958 SMR:Q99958 IntAct:Q99958
            STRING:Q99958 PhosphoSite:Q99958 DMDM:3024149 PaxDb:Q99958
            PRIDE:Q99958 DNASU:2303 Ensembl:ENST00000320354 GeneID:2303
            KEGG:hsa:2303 UCSC:uc002fjq.3 CTD:2303 GeneCards:GC16P086600
            HGNC:HGNC:3801 MIM:153200 MIM:153300 MIM:153400 MIM:602402
            neXtProt:NX_Q99958 Orphanet:33001 Orphanet:662 PharmGKB:PA28218
            InParanoid:Q99958 OMA:LNHLPGH PhylomeDB:Q99958
            EvolutionaryTrace:Q99958 GenomeRNAi:2303 NextBio:9351 Bgee:Q99958
            CleanEx:HS_FOXC2 Genevestigator:Q99958 GermOnline:ENSG00000176692
            GO:GO:0090050 GO:GO:0035470 Uniprot:Q99958
        Length = 501

 Score = 111 (44.1 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 23/56 (41%), Positives = 32/56 (57%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             +T N    F  +RFP+Y +N   W+NS+RHNLS+N  F K  +  +  G G  W L
Sbjct:    93 ITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 148


>UNIPROTKB|F1MVT0 [details] [associations]
            symbol:FOXC2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0090050 "positive regulation of cell migration involved
            in sprouting angiogenesis" evidence=IEA] [GO:0072144 "glomerular
            mesangial cell development" evidence=IEA] [GO:0072112 "glomerular
            visceral epithelial cell differentiation" evidence=IEA] [GO:0072011
            "glomerular endothelium development" evidence=IEA] [GO:0060038
            "cardiac muscle cell proliferation" evidence=IEA] [GO:0055010
            "ventricular cardiac muscle tissue morphogenesis" evidence=IEA]
            [GO:0050880 "regulation of blood vessel size" evidence=IEA]
            [GO:0048844 "artery morphogenesis" evidence=IEA] [GO:0048703
            "embryonic viscerocranium morphogenesis" evidence=IEA] [GO:0048343
            "paraxial mesodermal cell fate commitment" evidence=IEA]
            [GO:0048010 "vascular endothelial growth factor receptor signaling
            pathway" evidence=IEA] [GO:0046620 "regulation of organ growth"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IEA] [GO:0043010 "camera-type eye development"
            evidence=IEA] [GO:0035470 "positive regulation of vascular wound
            healing" evidence=IEA] [GO:0035050 "embryonic heart tube
            development" evidence=IEA] [GO:0033630 "positive regulation of cell
            adhesion mediated by integrin" evidence=IEA] [GO:0031490 "chromatin
            DNA binding" evidence=IEA] [GO:0030199 "collagen fibril
            organization" evidence=IEA] [GO:0014032 "neural crest cell
            development" evidence=IEA] [GO:0008286 "insulin receptor signaling
            pathway" evidence=IEA] [GO:0007219 "Notch signaling pathway"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001974 "blood
            vessel remodeling" evidence=IEA] [GO:0001946 "lymphangiogenesis"
            evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001657
            "ureteric bud development" evidence=IEA] [GO:0001656 "metanephros
            development" evidence=IEA] [GO:0001569 "patterning of blood
            vessels" evidence=IEA] [GO:0001503 "ossification" evidence=IEA]
            [GO:0001077 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in positive regulation of transcription" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0008286 GO:GO:0043565 GO:GO:0030199 GO:GO:0007219
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003705 GO:GO:0001077
            GO:GO:0000122 GO:GO:0001756 GO:GO:0043010 GO:GO:0044212
            GO:GO:0001974 GO:GO:0072144 GO:GO:0001946 GO:GO:0001569
            GO:GO:0033630 GO:GO:0014032 GO:GO:0050880 GO:GO:0001503
            GO:GO:0048844 GO:GO:0031490 GO:GO:0001656 GO:GO:0001657
            GO:GO:0046620 GO:GO:0072112 GO:GO:0048010 GO:GO:0060038
            GO:GO:0055010 GO:GO:0072011 GO:GO:0048703 GO:GO:0035050
            GeneTree:ENSGT00690000101636 GO:GO:0048343 OMA:LNHLPGH
            GO:GO:0090050 GO:GO:0035470 EMBL:DAAA02046218 IPI:IPI00691047
            UniGene:Bt.30376 Ensembl:ENSBTAT00000016540 NextBio:20867997
            Uniprot:F1MVT0
        Length = 502

 Score = 111 (44.1 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 23/56 (41%), Positives = 32/56 (57%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             +T N    F  +RFP+Y +N   W+NS+RHNLS+N  F K  +  +  G G  W L
Sbjct:    93 ITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 148


>UNIPROTKB|P32315 [details] [associations]
            symbol:foxa1-b "Forkhead box protein A1-B" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            InterPro:IPR018533 Pfam:PF09354 HOVERGEN:HBG006621 KO:K09387
            EMBL:M93658 EMBL:BC047130 PIR:I51580 RefSeq:NP_001080063.1
            UniGene:Xl.52787 ProteinModelPortal:P32315 SMR:P32315 GeneID:379755
            KEGG:xla:379755 CTD:379755 Xenbase:XB-GENE-6256649 Uniprot:P32315
        Length = 427

 Score = 110 (43.8 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 21/43 (48%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FPYY QN  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   191 FPYYRQNQQRWQNSIRHSLSFNDCFIKVSRSPDKPGKGSYWTL 233


>ZFIN|ZDB-GENE-990415-78 [details] [associations]
            symbol:foxa1 "forkhead box A1" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0019904 "protein domain specific binding"
            evidence=IEA;IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA;IBA] [GO:0048319 "axial
            mesoderm morphogenesis" evidence=IGI] [GO:0060487 "lung epithelial
            cell differentiation" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0010817 "regulation of hormone levels"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0009790 "embryo
            development" evidence=IBA] [GO:0045666 "positive regulation of
            neuron differentiation" evidence=IBA] [GO:0003690 "double-stranded
            DNA binding" evidence=IBA] [GO:0060441 "epithelial tube branching
            involved in lung morphogenesis" evidence=IBA] [GO:0042593 "glucose
            homeostasis" evidence=IBA] [GO:0005667 "transcription factor
            complex" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0048665 "neuron fate specification" evidence=IBA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 ZFIN:ZDB-GENE-990415-78 GO:GO:0019904 GO:GO:0043565
            GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0042593
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0045666 GO:GO:0008134 GO:GO:0007389
            GO:GO:0060487 GO:GO:0048665 GO:GO:0051090 GO:GO:0010817
            GO:GO:0060441 GO:GO:0048319 HSSP:Q99958 InterPro:IPR018533
            Pfam:PF09354 HOVERGEN:HBG006621 EMBL:AY247950 IPI:IPI00496878
            UniGene:Dr.75817 ProteinModelPortal:Q800Q3 SMR:Q800Q3 STRING:Q800Q3
            InParanoid:Q800Q3 ArrayExpress:Q800Q3 Uniprot:Q800Q3
        Length = 427

 Score = 110 (43.8 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 21/43 (48%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FPYY QN  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   191 FPYYRQNQQRWQNSIRHSLSFNDCFVKVSRSPDKPGKGSYWTL 233


>UNIPROTKB|E2QSH3 [details] [associations]
            symbol:FOXC2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0090050 "positive regulation of cell
            migration involved in sprouting angiogenesis" evidence=IEA]
            [GO:0072144 "glomerular mesangial cell development" evidence=IEA]
            [GO:0072112 "glomerular visceral epithelial cell differentiation"
            evidence=IEA] [GO:0072011 "glomerular endothelium development"
            evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
            evidence=IEA] [GO:0055010 "ventricular cardiac muscle tissue
            morphogenesis" evidence=IEA] [GO:0050880 "regulation of blood
            vessel size" evidence=IEA] [GO:0048844 "artery morphogenesis"
            evidence=IEA] [GO:0048703 "embryonic viscerocranium morphogenesis"
            evidence=IEA] [GO:0048343 "paraxial mesodermal cell fate
            commitment" evidence=IEA] [GO:0048010 "vascular endothelial growth
            factor receptor signaling pathway" evidence=IEA] [GO:0046620
            "regulation of organ growth" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0043010 "camera-type eye development"
            evidence=IEA] [GO:0035470 "positive regulation of vascular wound
            healing" evidence=IEA] [GO:0035050 "embryonic heart tube
            development" evidence=IEA] [GO:0033630 "positive regulation of cell
            adhesion mediated by integrin" evidence=IEA] [GO:0031490 "chromatin
            DNA binding" evidence=IEA] [GO:0030199 "collagen fibril
            organization" evidence=IEA] [GO:0014032 "neural crest cell
            development" evidence=IEA] [GO:0008286 "insulin receptor signaling
            pathway" evidence=IEA] [GO:0007219 "Notch signaling pathway"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001974 "blood
            vessel remodeling" evidence=IEA] [GO:0001946 "lymphangiogenesis"
            evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001657
            "ureteric bud development" evidence=IEA] [GO:0001656 "metanephros
            development" evidence=IEA] [GO:0001569 "patterning of blood
            vessels" evidence=IEA] [GO:0001503 "ossification" evidence=IEA]
            [GO:0001077 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in positive regulation of transcription" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0008286 GO:GO:0043565 GO:GO:0030199 GO:GO:0007219
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003705 GO:GO:0001077
            GO:GO:0000122 GO:GO:0001756 GO:GO:0043010 GO:GO:0044212
            GO:GO:0001974 GO:GO:0072144 GO:GO:0001946 GO:GO:0001569
            GO:GO:0033630 GO:GO:0014032 GO:GO:0050880 GO:GO:0001503
            GO:GO:0048844 GO:GO:0031490 GO:GO:0001656 GO:GO:0001657
            GO:GO:0046620 GO:GO:0072112 GO:GO:0048010 GO:GO:0060038
            GO:GO:0055010 GO:GO:0072011 GO:GO:0048703 KO:K09396 GO:GO:0035050
            GeneTree:ENSGT00690000101636 GO:GO:0048343 CTD:2303 OMA:LNHLPGH
            GO:GO:0090050 GO:GO:0035470 EMBL:AAEX03003995 RefSeq:XP_860948.1
            Ensembl:ENSCAFT00000031684 GeneID:489671 KEGG:cfa:489671
            NextBio:20862823 Uniprot:E2QSH3
        Length = 505

 Score = 111 (44.1 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 23/56 (41%), Positives = 32/56 (57%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             +T N    F  +RFP+Y +N   W+NS+RHNLS+N  F K  +  +  G G  W L
Sbjct:    93 ITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 148


>UNIPROTKB|F1NFK8 [details] [associations]
            symbol:FOXN2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00700000104051
            EMBL:AADN02036249 IPI:IPI00819285 Ensembl:ENSGALT00000039602
            OMA:AILERQS ArrayExpress:F1NFK8 Uniprot:F1NFK8
        Length = 438

 Score = 110 (43.8 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 23/44 (52%), Positives = 27/44 (61%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKAS---QGAGHLW 54
             ERFPY+      WKNSVRHNLS+N  FRK  ++     G G LW
Sbjct:   144 ERFPYFATAPTGWKNSVRHNLSLNKCFRKVERSHGKVNGKGSLW 187


>UNIPROTKB|H0YJ94 [details] [associations]
            symbol:FOXN3 "Forkhead box protein N3" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            EMBL:AL138478 EMBL:AL356805 EMBL:AL357093 HGNC:HGNC:1928
            ChiTaRS:FOXN3 EMBL:AL137230 EMBL:AL137785 EMBL:AL157736
            EMBL:AL163032 Ensembl:ENST00000554005 Bgee:H0YJ94 Uniprot:H0YJ94
        Length = 91

 Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 23/42 (54%), Positives = 26/42 (61%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKA-SQ--GAGHLW 54
             FPY+      WKNSVRHNLS+N  F+K  K  SQ  G G LW
Sbjct:     1 FPYFANAPTGWKNSVRHNLSLNKCFKKVDKERSQSIGKGSLW 42


>UNIPROTKB|Q7ZX03 [details] [associations]
            symbol:foxk2 "Forkhead box protein K2" species:8355
            "Xenopus laevis" [GO:0000287 "magnesium ion binding" evidence=ISS]
            [GO:0003677 "DNA binding" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            InterPro:IPR000253 InterPro:IPR001766 InterPro:IPR008984
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006 PROSITE:PS50039
            SMART:SM00240 SMART:SM00339 GO:GO:0005634 GO:GO:0000287
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:2.60.200.20 SUPFAM:SSF49879 HSSP:Q01167
            HOVERGEN:HBG051649 EMBL:BC046369 EMBL:BC112949 UniGene:Xl.23253
            ProteinModelPortal:Q7ZX03 SMR:Q7ZX03 Xenbase:XB-GENE-864986
            Uniprot:Q7ZX03
        Length = 642

 Score = 112 (44.5 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 26/69 (37%), Positives = 40/69 (57%)

Query:     3 LTANLRLFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL--- 56
             LT N  ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +   
Sbjct:   240 LTLN-GIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPA 298

Query:    57 SDMEPVEDA 65
             S+ + VE A
Sbjct:   299 SESKLVEQA 307


>RGD|1305408 [details] [associations]
            symbol:Foxk2 "forkhead box K2" species:10116 "Rattus norvegicus"
            [GO:0000287 "magnesium ion binding" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR000253 InterPro:IPR001766
            InterPro:IPR008984 InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006
            PROSITE:PS50039 SMART:SM00240 SMART:SM00339 RGD:1305408
            GO:GO:0000287 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 GO:GO:0009888 IPI:IPI00949827
            Ensembl:ENSRNOT00000068086 ArrayExpress:F1LS44 Uniprot:F1LS44
        Length = 650

 Score = 112 (44.5 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 26/69 (37%), Positives = 40/69 (57%)

Query:     3 LTANLRLFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL--- 56
             LT N  ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +   
Sbjct:   270 LTLN-GIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPA 328

Query:    57 SDMEPVEDA 65
             S+ + VE A
Sbjct:   329 SESKLVEQA 337


>MGI|MGI:1916087 [details] [associations]
            symbol:Foxk2 "forkhead box K2" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0000287 "magnesium ion
            binding" evidence=ISO;IBA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0009790
            "embryo development" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] InterPro:IPR000253
            InterPro:IPR001766 InterPro:IPR008984 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF00498 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50006 PROSITE:PS50039 SMART:SM00240
            SMART:SM00339 MGI:MGI:1916087 GO:GO:0000287 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:2.60.200.20
            SUPFAM:SSF49879 GO:GO:0005667 GO:GO:0003705 GO:GO:0000122
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 EMBL:AL808021 eggNOG:COG5025
            GO:GO:0009888 HSSP:Q01167 GeneTree:ENSGT00700000104094
            HOGENOM:HOG000072588 HOVERGEN:HBG051649 KO:K09404 CTD:3607
            OMA:HGQVNNA OrthoDB:EOG4XD3QX EMBL:EU882160 EMBL:AK150439
            IPI:IPI00808277 IPI:IPI00854998 RefSeq:NP_001074401.2
            UniGene:Mm.209750 ProteinModelPortal:Q3UCQ1 SMR:Q3UCQ1
            STRING:Q3UCQ1 PhosphoSite:Q3UCQ1 PaxDb:Q3UCQ1 PRIDE:Q3UCQ1
            DNASU:68837 Ensembl:ENSMUST00000106113 GeneID:68837 KEGG:mmu:68837
            UCSC:uc007mvs.1 InParanoid:B5AZX0 NextBio:328023 Bgee:Q3UCQ1
            CleanEx:MM_FOXK2 Genevestigator:Q3UCQ1
            GermOnline:ENSMUSG00000039275 Uniprot:Q3UCQ1
        Length = 651

 Score = 112 (44.5 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 26/69 (37%), Positives = 40/69 (57%)

Query:     3 LTANLRLFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL--- 56
             LT N  ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +   
Sbjct:   270 LTLN-GIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPA 328

Query:    57 SDMEPVEDA 65
             S+ + VE A
Sbjct:   329 SESKLVEQA 337


>ZFIN|ZDB-GENE-050417-1 [details] [associations]
            symbol:foxn2b "forkhead box N2b" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-050417-1 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0009790 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0051090 GO:GO:0009888 GeneTree:ENSGT00700000104051
            EMBL:BX511072 IPI:IPI00482547 Ensembl:ENSDART00000130582
            Bgee:F1QIG6 Uniprot:F1QIG6
        Length = 396

 Score = 109 (43.4 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 21/44 (47%), Positives = 27/44 (61%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRK---GVKASQGAGHLW 54
             + FPY++     WKNSVRHNLS+N  FRK    +  + G G LW
Sbjct:   161 KHFPYFSSAPTGWKNSVRHNLSLNKCFRKVERSIGKTNGKGSLW 204


>UNIPROTKB|F1NP93 [details] [associations]
            symbol:FOXG1 "Forkhead box protein G1" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            IPI:IPI00581171 OMA:YSTMLTQ GeneTree:ENSGT00700000104051
            EMBL:AADN02003339 Ensembl:ENSGALT00000016016 Uniprot:F1NP93
        Length = 406

 Score = 109 (43.4 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 24/56 (42%), Positives = 31/56 (55%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNL 56
             LT N    F  + FPYY +N   W+NS+RHNLS+N  F K  +     G G+ W L
Sbjct:   119 LTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWML 174


>UNIPROTKB|H9GWC4 [details] [associations]
            symbol:FOXK2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104094 OMA:HGQVNNA Ensembl:ENSCAFT00000020603
            Uniprot:H9GWC4
        Length = 573

 Score = 111 (44.1 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 25/69 (36%), Positives = 40/69 (57%)

Query:     3 LTANLRLFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL--- 56
             LT N  ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +   
Sbjct:   192 LTLN-GIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPA 250

Query:    57 SDMEPVEDA 65
             S+ + +E A
Sbjct:   251 SESKLIEQA 259


>UNIPROTKB|E2QUB0 [details] [associations]
            symbol:FOXF1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0090131 "mesenchyme migration" evidence=IEA]
            [GO:0072189 "ureter development" evidence=IEA] [GO:0071407
            "cellular response to organic cyclic compound" evidence=IEA]
            [GO:0071345 "cellular response to cytokine stimulus" evidence=IEA]
            [GO:0061030 "epithelial cell differentiation involved in mammary
            gland alveolus development" evidence=IEA] [GO:0060841 "venous blood
            vessel development" evidence=IEA] [GO:0060463 "lung lobe
            morphogenesis" evidence=IEA] [GO:0060461 "right lung morphogenesis"
            evidence=IEA] [GO:0060446 "branching involved in open tracheal
            system development" evidence=IEA] [GO:0060441 "epithelial tube
            branching involved in lung morphogenesis" evidence=IEA] [GO:0060438
            "trachea development" evidence=IEA] [GO:0060426 "lung vasculature
            development" evidence=IEA] [GO:0051150 "regulation of smooth muscle
            cell differentiation" evidence=IEA] [GO:0051145 "smooth muscle cell
            differentiation" evidence=IEA] [GO:0050728 "negative regulation of
            inflammatory response" evidence=IEA] [GO:0048617 "embryonic foregut
            morphogenesis" evidence=IEA] [GO:0048613 "embryonic ectodermal
            digestive tract morphogenesis" evidence=IEA] [GO:0048371 "lateral
            mesodermal cell differentiation" evidence=IEA] [GO:0048286 "lung
            alveolus development" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045198 "establishment of epithelial cell
            apical/basal polarity" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043305 "negative
            regulation of mast cell degranulation" evidence=IEA] [GO:0031016
            "pancreas development" evidence=IEA] [GO:0030335 "positive
            regulation of cell migration" evidence=IEA] [GO:0030198
            "extracellular matrix organization" evidence=IEA] [GO:0016337
            "cell-cell adhesion" evidence=IEA] [GO:0014822 "detection of
            wounding" evidence=IEA] [GO:0010811 "positive regulation of
            cell-substrate adhesion" evidence=IEA] [GO:0007494 "midgut
            development" evidence=IEA] [GO:0007368 "determination of left/right
            symmetry" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003214
            "cardiac left ventricle morphogenesis" evidence=IEA] [GO:0003197
            "endocardial cushion development" evidence=IEA] [GO:0002053
            "positive regulation of mesenchymal cell proliferation"
            evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001701
            "in utero embryonic development" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0050728
            GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0030198
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0007494 GO:GO:0000122 GO:GO:0001756 GO:GO:0044212
            GO:GO:0048286 GO:GO:0016337 GO:GO:0060841 GO:GO:0007368
            GO:GO:0051145 GO:GO:0003197 GO:GO:0030335 GO:GO:0001570
            GO:GO:0010811 GO:GO:0031016 GO:GO:0071407 GO:GO:0060438
            GO:GO:0007224 GO:GO:0048617 GO:GO:0002053 GO:GO:0051150
            GO:GO:0060441 GO:GO:0045198 GO:GO:0003214 GO:GO:0060446
            GO:GO:0071345 GO:GO:0043305 GO:GO:0060426
            GeneTree:ENSGT00690000101636 GO:GO:0060463 GO:GO:0061030 CTD:2294
            KO:K09399 OMA:MTAEVQQ GO:GO:0014822 GO:GO:0048613 GO:GO:0048371
            GO:GO:0090131 GO:GO:0060461 GO:GO:0072189 EMBL:AAEX03003995
            RefSeq:XP_546792.2 ProteinModelPortal:E2QUB0
            Ensembl:ENSCAFT00000031689 GeneID:489672 KEGG:cfa:489672
            NextBio:20862824 Uniprot:E2QUB0
        Length = 354

 Score = 108 (43.1 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNL 56
             F + RFP++  +   WKNSVRHNLS+N  F K  K     G GH W +
Sbjct:    52 FLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTI 99


>ZFIN|ZDB-GENE-030131-2861 [details] [associations]
            symbol:foxk2 "forkhead box K2" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0000287 "magnesium
            ion binding" evidence=IBA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR000253 InterPro:IPR001766
            InterPro:IPR008984 InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006
            PROSITE:PS50039 SMART:SM00240 SMART:SM00339
            ZFIN:ZDB-GENE-030131-2861 GO:GO:0000287 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:2.60.200.20
            SUPFAM:SSF49879 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0009790 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0051090 GO:GO:0009888 HOGENOM:HOG000072588 HOVERGEN:HBG051649
            EMBL:BC159229 IPI:IPI00493023 UniGene:Dr.77018 ArrayExpress:B0JZL4
            Uniprot:B0JZL4
        Length = 585

 Score = 111 (44.1 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 22/57 (38%), Positives = 34/57 (59%)

Query:     3 LTANLRLFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             LT N  ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +
Sbjct:   266 LTLN-GIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVARSQEEPGKGSFWRI 321


>UNIPROTKB|F1NV54 [details] [associations]
            symbol:FOXN2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00700000104051
            EMBL:AADN02036249 IPI:IPI00599839 Ensembl:ENSGALT00000014538
            ArrayExpress:F1NV54 Uniprot:F1NV54
        Length = 175

 Score = 101 (40.6 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 19/29 (65%), Positives = 21/29 (72%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRK 42
             ERFPY+      WKNSVRHNLS+N  FRK
Sbjct:   144 ERFPYFATAPTGWKNSVRHNLSLNKCFRK 172


>ZFIN|ZDB-GENE-990415-267 [details] [associations]
            symbol:foxg1a "forkhead box G1a" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0042472 "inner ear morphogenesis" evidence=IBA] [GO:0007346
            "regulation of mitotic cell cycle" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0030902 "hindbrain development" evidence=IBA]
            [GO:0021954 "central nervous system neuron development"
            evidence=IBA] [GO:0009953 "dorsal/ventral pattern formation"
            evidence=IBA] [GO:0035058 "nonmotile primary cilium assembly"
            evidence=IBA] [GO:0016199 "axon midline choice point recognition"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0045787 "positive
            regulation of cell cycle" evidence=IBA] [GO:0045665 "negative
            regulation of neuron differentiation" evidence=IBA] [GO:0008301
            "DNA binding, bending" evidence=IBA] [GO:0002052 "positive
            regulation of neuroblast proliferation" evidence=IBA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0060059
            "embryonic retina morphogenesis in camera-type eye" evidence=IMP]
            [GO:0030182 "neuron differentiation" evidence=IMP] [GO:0043584
            "nose development" evidence=IMP] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-990415-267 GO:GO:0009792 GO:GO:0007346 GO:GO:0043565
            GO:GO:0045944 GO:GO:0016199 GO:GO:0045665 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0042472 GO:GO:0003690 GO:GO:0030902 GO:GO:0009953
            GO:GO:0008134 GO:GO:0021954 GO:GO:0045787 GO:GO:0002052
            GO:GO:0051090 GO:GO:0035058 GO:GO:0060059 GO:GO:0043584
            GO:GO:0009888 HOVERGEN:HBG051645 OMA:YSTMLTQ
            GeneTree:ENSGT00700000104051 EMBL:BX511189 EMBL:BC092710
            IPI:IPI00492072 UniGene:Dr.75832 SMR:Q568V0
            Ensembl:ENSDART00000104204 InParanoid:Q568V0 Uniprot:Q568V0
        Length = 420

 Score = 109 (43.4 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 24/56 (42%), Positives = 31/56 (55%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNL 56
             LT N    F  + FPYY +N   W+NS+RHNLS+N  F K  +     G G+ W L
Sbjct:   134 LTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWML 189


>ZFIN|ZDB-GENE-030131-5310 [details] [associations]
            symbol:si:ch211-262e15.1 "si:ch211-262e15.1"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] InterPro:IPR000253 InterPro:IPR001766
            InterPro:IPR008984 InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006
            PROSITE:PS50039 SMART:SM00240 SMART:SM00339
            ZFIN:ZDB-GENE-030131-5310 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:2.60.200.20
            SUPFAM:SSF49879 GeneTree:ENSGT00700000104094 KO:K09404
            EMBL:BX539347 EMBL:FP326646 IPI:IPI00636588 RefSeq:XP_001922856.1
            Ensembl:ENSDART00000018159 GeneID:798356 KEGG:dre:798356
            NextBio:20933376 Bgee:E7FFM9 Uniprot:E7FFM9
        Length = 597

 Score = 111 (44.1 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 41/133 (30%), Positives = 61/133 (45%)

Query:     3 LTANLRLFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL--- 56
             LT N  ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +   
Sbjct:   232 LTLN-GIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPS 290

Query:    57 SDMEPVEDASKSNWVSIKVTGVK--RTGWLAFGYYSERPKYDMLNTSGVLRTCMCNSNET 114
             S+ + VE A +      +  GV   RT     G  S R      N SGVL          
Sbjct:   291 SEGKLVEQAFRKR----RPRGVPCFRT---PLGPLSSRSAPASPNHSGVLSAHSSGVQTP 343

Query:   115 YMLCRKCKGMPVQ 127
               L R+   +P++
Sbjct:   344 DSLSREGSPVPME 356


>UNIPROTKB|Q28EM1 [details] [associations]
            symbol:foxj2 "Forkhead box protein J2" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0043565 "sequence-specific DNA
            binding" evidence=ISS] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISS] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 eggNOG:COG5025 HSSP:Q01167
            GeneTree:ENSGT00700000104094 CTD:55810 HOGENOM:HOG000231184
            HOVERGEN:HBG051648 KO:K09403 OrthoDB:EOG473PR7 EMBL:CR848176
            EMBL:BC074713 RefSeq:NP_001005675.2 UniGene:Str.24177
            ProteinModelPortal:Q28EM1 SMR:Q28EM1 STRING:Q28EM1
            Ensembl:ENSXETT00000028887 GeneID:448174 KEGG:xtr:448174
            Xenbase:XB-GENE-483646 InParanoid:Q6GL06 OMA:INSAPAK Bgee:Q28EM1
            Uniprot:Q28EM1
        Length = 512

 Score = 110 (43.8 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 24/55 (43%), Positives = 30/55 (54%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNLSDMEPVEDAS 66
             + FPYY      WKNS+RHNLS+N  FRK  +     G G  W + D  P ED +
Sbjct:    91 DNFPYYRNAGVGWKNSIRHNLSLNKCFRKVPRPRDDPGKGSYWMI-DSCPKEDVA 144


>FB|FBgn0003430 [details] [associations]
            symbol:slp1 "sloppy paired 1" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
            [GO:0007380 "specification of segmental identity, head"
            evidence=IEP;IGI;IMP] [GO:0060914 "heart formation" evidence=IMP]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IBA;IDA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA;IDA] [GO:0007379
            "segment specification" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0042305 "specification of segmental identity,
            mandibular segment" evidence=NAS] [GO:0008595 "anterior/posterior
            axis specification, embryo" evidence=NAS] [GO:0007507 "heart
            development" evidence=TAS] [GO:0007350 "blastoderm segmentation"
            evidence=TAS] [GO:0001707 "mesoderm formation" evidence=TAS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0035058 "nonmotile primary cilium assembly" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0048665
            "neuron fate specification" evidence=IBA] [GO:0002052 "positive
            regulation of neuroblast proliferation" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0016199 "axon midline choice point
            recognition" evidence=IBA] [GO:0009792 "embryo development ending
            in birth or egg hatching" evidence=IBA] [GO:0007346 "regulation of
            mitotic cell cycle" evidence=IBA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0045787 "positive regulation of cell cycle" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0009953 "dorsal/ventral pattern formation"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0009792 GO:GO:0007346 EMBL:AE014134 GO:GO:0008595
            GO:GO:0043565 GO:GO:0045944 GO:GO:0016199 GO:GO:0045665
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000122 GO:GO:0008301 GO:GO:0003690 GO:GO:0001707
            GO:GO:0007366 GO:GO:0009953 GO:GO:0008134 GO:GO:0060914
            GO:GO:0048665 GO:GO:0045787 GO:GO:0002052 GO:GO:0051090
            GO:GO:0035058 eggNOG:COG5025 GO:GO:0007380 EMBL:X66095 EMBL:X66096
            RefSeq:NP_476730.1 UniGene:Dm.4659 ProteinModelPortal:P32030
            SMR:P32030 IntAct:P32030 MINT:MINT-314680 STRING:P32030
            PRIDE:P32030 GeneID:33607 KEGG:dme:Dmel_CG16738 CTD:33607
            FlyBase:FBgn0003430 InParanoid:P32030 OrthoDB:EOG4THT93
            GenomeRNAi:33607 NextBio:784418 Bgee:P32030 GermOnline:CG16738
            Uniprot:P32030
        Length = 322

 Score = 107 (42.7 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 27/75 (36%), Positives = 37/75 (49%)

Query:    15 RFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNLS-DMEPVEDASKSNWV 71
             RFPY+  N   W+NS+RHNLS+N  F K  ++    G G+ W L    E V     +  +
Sbjct:   153 RFPYFKANKRGWQNSIRHNLSLNKCFTKIPRSYDDPGKGNYWILDPSAEEVFIGETTGKL 212

Query:    72 SIKVTGVKRTGWLAF 86
               K  G  RT   A+
Sbjct:   213 RRKNPGASRTRLAAY 227


>UNIPROTKB|Q9W707 [details] [associations]
            symbol:foxf1-b "Forkhead box protein F1-B" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=ISS;NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0008283 "cell proliferation" evidence=IMP]
            [GO:0030509 "BMP signaling pathway" evidence=IMP] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0048566 "embryonic digestive tract development" evidence=IMP]
            [GO:0048745 "smooth muscle tissue development" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0045893 GO:GO:0030154 GO:GO:0003677
            GO:GO:0008283 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0030509 GO:GO:0048566
            GO:GO:0048745 HSSP:Q99958 KO:K09399 HOVERGEN:HBG051644
            EMBL:AJ242679 EMBL:BC108567 RefSeq:NP_001090140.1 UniGene:Xl.54939
            ProteinModelPortal:Q9W707 SMR:Q9W707 GeneID:735218 KEGG:xla:735218
            CTD:735218 Xenbase:XB-GENE-6254084 Uniprot:Q9W707
        Length = 372

 Score = 108 (43.1 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNL 56
             F + RFP++  +   WKNSVRHNLS+N  F K  K     G GH W +
Sbjct:    83 FLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTI 130


>UNIPROTKB|Q9YHC5 [details] [associations]
            symbol:foxg1 "Forkhead box protein G1" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IMP] [GO:0008285 "negative regulation of
            cell proliferation" evidence=IMP] [GO:0042659 "regulation of cell
            fate specification" evidence=IMP] [GO:0045892 "negative regulation
            of transcription, DNA-dependent" evidence=IDA;IMP] [GO:0045893
            "positive regulation of transcription, DNA-dependent"
            evidence=IDA;IMP] [GO:0050768 "negative regulation of neurogenesis"
            evidence=IMP] [GO:0050769 "positive regulation of neurogenesis"
            evidence=IMP] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045892 GO:GO:0045893
            GO:GO:0008285 GO:GO:0003677 GO:GO:0008284 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0050769 GO:GO:0050768 GO:GO:0042659 HSSP:Q99958 CTD:2290
            HOVERGEN:HBG051645 KO:K09385 EMBL:AF101387 RefSeq:NP_001079165.1
            UniGene:Xl.416 ProteinModelPortal:Q9YHC5 SMR:Q9YHC5 GeneID:373732
            KEGG:xla:373732 Xenbase:XB-GENE-865339 Uniprot:Q9YHC5
        Length = 436

 Score = 109 (43.4 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 24/56 (42%), Positives = 31/56 (55%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNL 56
             LT N    F  + FPYY +N   W+NS+RHNLS+N  F K  +     G G+ W L
Sbjct:   149 LTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWML 204


>UNIPROTKB|Q28BS5 [details] [associations]
            symbol:foxf1 "Forkhead box protein F1" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0003677 "DNA binding"
            evidence=ISS] [GO:0008283 "cell proliferation" evidence=ISS]
            [GO:0030509 "BMP signaling pathway" evidence=ISS] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0048566 "embryonic digestive tract development" evidence=ISS]
            [GO:0048745 "smooth muscle tissue development" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0045893 GO:GO:0030154 GO:GO:0003677
            GO:GO:0008283 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0030509 GO:GO:0048566
            eggNOG:COG5025 GO:GO:0048745 CTD:2294 HOGENOM:HOG000060124
            KO:K09399 HOVERGEN:HBG051644 EMBL:CR942666 RefSeq:NP_001039226.1
            UniGene:Str.13214 HSSP:Q01167 ProteinModelPortal:Q28BS5 SMR:Q28BS5
            STRING:Q28BS5 GeneID:734087 KEGG:xtr:734087 Xenbase:XB-GENE-478922
            Uniprot:Q28BS5
        Length = 373

 Score = 108 (43.1 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNL 56
             F + RFP++  +   WKNSVRHNLS+N  F K  K     G GH W +
Sbjct:    83 FLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTI 130


>UNIPROTKB|Q7ZYQ0 [details] [associations]
            symbol:foxi1e "Forkhead box protein I1-ema" species:8355
            "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0042664
            "negative regulation of endodermal cell fate specification"
            evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0048335 "negative regulation of
            mesodermal cell fate determination" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0007275 GO:GO:0005634 GO:GO:0045893 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            HSSP:Q99958 GO:GO:0042664 CTD:2299 HOVERGEN:HBG067944 KO:K09401
            EMBL:DQ026065 EMBL:BC042303 RefSeq:NP_001080367.1 UniGene:Xl.20089
            ProteinModelPortal:Q7ZYQ0 SMR:Q7ZYQ0 GeneID:380059 KEGG:xla:380059
            Xenbase:XB-GENE-494129 GO:GO:0048335 Uniprot:Q7ZYQ0
        Length = 373

 Score = 108 (43.1 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 28/91 (30%), Positives = 47/91 (51%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNLS-DMEPVEDASKSNW 70
             + FP+YN++   W+NS+RHNLS+N  F+K  +     G G+ W L  + E + D      
Sbjct:   155 DNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRR 214

Query:    71 VSIKVTGVKRTGWLAFGYYSERPKYDMLNTS 101
                + + V   G L+    S++P+   L+ S
Sbjct:   215 KRKRKSDVSPNGQLS----SDKPEGSPLSES 241


>UNIPROTKB|Q9W706 [details] [associations]
            symbol:foxf1-a "Forkhead box protein F1-A" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=ISS;NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0008283 "cell proliferation" evidence=ISS]
            [GO:0030509 "BMP signaling pathway" evidence=ISS] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0048566 "embryonic digestive tract development" evidence=ISS]
            [GO:0048745 "smooth muscle tissue development" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0045893 GO:GO:0030154 GO:GO:0003677
            GO:GO:0008283 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0030509 GO:GO:0048566
            GO:GO:0048745 HSSP:Q99958 KO:K09399 HOVERGEN:HBG051644
            EMBL:AJ242680 RefSeq:NP_001084262.1 UniGene:Xl.182
            ProteinModelPortal:Q9W706 SMR:Q9W706 GeneID:399398 KEGG:xla:399398
            CTD:399398 Xenbase:XB-GENE-865226 Uniprot:Q9W706
        Length = 373

 Score = 108 (43.1 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNL 56
             F + RFP++  +   WKNSVRHNLS+N  F K  K     G GH W +
Sbjct:    83 FLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTI 130


>UNIPROTKB|Q12946 [details] [associations]
            symbol:FOXF1 "Forkhead box protein F1" species:9606 "Homo
            sapiens" [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0001570 "vasculogenesis"
            evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0002053
            "positive regulation of mesenchymal cell proliferation"
            evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0007368 "determination of left/right symmetry"
            evidence=IEA] [GO:0010811 "positive regulation of cell-substrate
            adhesion" evidence=IEA] [GO:0014822 "detection of wounding"
            evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
            [GO:0030198 "extracellular matrix organization" evidence=IEA]
            [GO:0030335 "positive regulation of cell migration" evidence=IEA]
            [GO:0043305 "negative regulation of mast cell degranulation"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0045198 "establishment of epithelial
            cell apical/basal polarity" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0048286 "lung alveolus development" evidence=IEA]
            [GO:0048371 "lateral mesodermal cell differentiation" evidence=IEA]
            [GO:0048617 "embryonic foregut morphogenesis" evidence=IEA]
            [GO:0050728 "negative regulation of inflammatory response"
            evidence=IEA] [GO:0051145 "smooth muscle cell differentiation"
            evidence=IEA] [GO:0051150 "regulation of smooth muscle cell
            differentiation" evidence=IEA] [GO:0060438 "trachea development"
            evidence=IEA] [GO:0060441 "epithelial tube branching involved in
            lung morphogenesis" evidence=IEA] [GO:0060461 "right lung
            morphogenesis" evidence=IEA] [GO:0060463 "lung lobe morphogenesis"
            evidence=IEA] [GO:0061030 "epithelial cell differentiation involved
            in mammary gland alveolus development" evidence=IEA] [GO:0071345
            "cellular response to cytokine stimulus" evidence=IEA] [GO:0071407
            "cellular response to organic cyclic compound" evidence=IEA]
            [GO:0090131 "mesenchyme migration" evidence=IEA] [GO:0001763
            "morphogenesis of a branching structure" evidence=IMP] [GO:0030323
            "respiratory tube development" evidence=IMP] [GO:0001701 "in utero
            embryonic development" evidence=IMP] [GO:0060841 "venous blood
            vessel development" evidence=IMP] [GO:0001568 "blood vessel
            development" evidence=IMP] [GO:0030324 "lung development"
            evidence=IMP] [GO:0003214 "cardiac left ventricle morphogenesis"
            evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
            [GO:0060446 "branching involved in open tracheal system
            development" evidence=IMP] [GO:0048613 "embryonic ectodermal
            digestive tract morphogenesis" evidence=IMP] [GO:0048557 "embryonic
            digestive tract morphogenesis" evidence=IMP] [GO:0072001 "renal
            system development" evidence=IMP] [GO:0072189 "ureter development"
            evidence=IMP] [GO:0003197 "endocardial cushion development"
            evidence=IMP] [GO:0031016 "pancreas development" evidence=IMP]
            [GO:0007494 "midgut development" evidence=IMP] [GO:0048565
            "digestive tract development" evidence=IMP] [GO:0060426 "lung
            vasculature development" evidence=IMP] [GO:0003690 "double-stranded
            DNA binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISS] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IC] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0045893
            GO:GO:0050728 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
            GO:GO:0030198 Gene3D:1.10.10.10 InterPro:IPR011991
            Pathway_Interaction_DB:hnf3bpathway GO:GO:0005667 GO:GO:0003705
            GO:GO:0007494 GO:GO:0000122 GO:GO:0008301 GO:GO:0001756
            GO:GO:0044212 GO:GO:0048286 GO:GO:0003690 GO:GO:0016337
            GO:GO:0060841 GO:GO:0007368 GO:GO:0051145 GO:GO:0003197
            GO:GO:0030335 GO:GO:0001570 GO:GO:0010811 GO:GO:0008134
            GO:GO:0031016 GO:GO:0007389 GO:GO:0071407 GO:GO:0060438
            GO:GO:0007224 GO:GO:0051090 GO:GO:0048617 GO:GO:0002053
            GO:GO:0051150 GO:GO:0060441 GO:GO:0045198 GO:GO:0003214
            GO:GO:0060446 GO:GO:0071345 GO:GO:0043305 eggNOG:COG5025
            GO:GO:0060426 GO:GO:0060463 GO:GO:0061030 CTD:2294
            HOGENOM:HOG000060124 KO:K09399 OMA:MTAEVQQ OrthoDB:EOG4BRWM4
            EMBL:U13219 EMBL:AF085343 EMBL:AF085342 EMBL:AK314167 EMBL:AC009108
            EMBL:BC089442 IPI:IPI00871189 PIR:S51624 RefSeq:NP_001442.2
            UniGene:Hs.155591 ProteinModelPortal:Q12946 SMR:Q12946
            STRING:Q12946 PhosphoSite:Q12946 DMDM:238054293 PaxDb:Q12946
            PRIDE:Q12946 DNASU:2294 Ensembl:ENST00000262426 GeneID:2294
            KEGG:hsa:2294 UCSC:uc002fjl.3 GeneCards:GC16P086544 HGNC:HGNC:3809
            HPA:HPA028886 MIM:265380 MIM:601089 neXtProt:NX_Q12946
            Orphanet:210122 PharmGKB:PA28226 HOVERGEN:HBG051644
            InParanoid:Q12946 GenomeRNAi:2294 NextBio:9311 Bgee:Q12946
            CleanEx:HS_FOXF1 Genevestigator:Q12946 GermOnline:ENSG00000103241
            GO:GO:0014822 GO:GO:0048613 GO:GO:0048371 GO:GO:0090131
            GO:GO:0060461 GO:GO:0072189 Uniprot:Q12946
        Length = 379

 Score = 108 (43.1 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNL 56
             F + RFP++  +   WKNSVRHNLS+N  F K  K     G GH W +
Sbjct:    77 FLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTI 124


>ZFIN|ZDB-GENE-050419-153 [details] [associations]
            symbol:foxf1 "forkhead box F1" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-050419-153 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 eggNOG:COG5025
            GeneTree:ENSGT00690000101636 EMBL:BX571798 EMBL:BC129194
            IPI:IPI00487605 RefSeq:NP_001073655.1 UniGene:Dr.89399
            ProteinModelPortal:A1L1S5 SMR:A1L1S5 STRING:A1L1S5
            Ensembl:ENSDART00000012374 GeneID:566407 KEGG:dre:566407 CTD:2294
            HOGENOM:HOG000060124 InParanoid:A1L1S5 KO:K09399 OMA:MTAEVQQ
            OrthoDB:EOG4BRWM4 NextBio:20888166 Bgee:A1L1S5 Uniprot:A1L1S5
        Length = 380

 Score = 108 (43.1 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNL 56
             F + RFP++  +   WKNSVRHNLS+N  F K  K     G GH W +
Sbjct:    81 FLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTI 128


>UNIPROTKB|Q6F2E4 [details] [associations]
            symbol:foxd1 "Forkhead box protein D1" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0001755 "neural crest cell migration" evidence=ISS;IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007398 "ectoderm development" evidence=ISS]
            [GO:0007399 "nervous system development" evidence=ISS] [GO:0007422
            "peripheral nervous system development" evidence=IBA] [GO:0007498
            "mesoderm development" evidence=ISS] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0030318 "melanocyte differentiation" evidence=IBA] [GO:0030336
            "negative regulation of cell migration" evidence=ISS] [GO:0030513
            "positive regulation of BMP signaling pathway" evidence=IBA]
            [GO:0030900 "forebrain development" evidence=ISS] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0048484 "enteric nervous
            system development" evidence=IBA] [GO:0048485 "sympathetic nervous
            system development" evidence=IBA] [GO:0048846 "axon extension
            involved in axon guidance" evidence=IBA] [GO:0048937 "lateral line
            nerve glial cell development" evidence=IBA] [GO:0050935 "iridophore
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            [GO:0060678 "dichotomous subdivision of terminal units involved in
            ureteric bud branching" evidence=IBA] [GO:0090184 "positive
            regulation of kidney development" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0007498
            GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0030900
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0030336
            GO:GO:0009790 GO:GO:0003690 GO:GO:0030513 GO:GO:0051216
            GO:GO:0008134 GO:GO:0007389 GO:GO:0007398 GO:GO:0048485
            GO:GO:0030318 GO:GO:0048484 GO:GO:0051090 GO:GO:0090184
            GO:GO:0048846 eggNOG:COG5025 GeneTree:ENSGT00700000104135 KO:K09397
            GO:GO:0048937 HSSP:Q63245 CTD:2297 HOVERGEN:HBG051641
            OrthoDB:EOG45MN6S GO:GO:0060678 GO:GO:0050935 HOGENOM:HOG000231285
            EMBL:AC149037 EMBL:BC081361 RefSeq:NP_001008148.1 UniGene:Str.9073
            ProteinModelPortal:Q6F2E4 SMR:Q6F2E4 STRING:Q6F2E4
            Ensembl:ENSXETT00000036667 GeneID:493510 KEGG:xtr:493510
            Xenbase:XB-GENE-488077 InParanoid:Q6F2E4 Bgee:Q6F2E4 Uniprot:Q6F2E4
        Length = 329

 Score = 107 (42.7 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 23/55 (41%), Positives = 31/55 (56%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNLSDMEPVE 63
             F   RFPYY +    W+NS+RHNLS+N  F K  +   + G G+ W L D E  +
Sbjct:    97 FISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL-DPESAD 150


>RGD|621727 [details] [associations]
            symbol:Foxe3 "forkhead box E3" species:10116 "Rattus norvegicus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001654 "eye development"
            evidence=ISO;IMP] [GO:0002089 "lens morphogenesis in camera-type
            eye" evidence=IBA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISO;NAS] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA;ISO;IBA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=IEA;ISO] [GO:0006590 "thyroid hormone generation"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0016477 "cell migration" evidence=IBA] [GO:0030878 "thyroid
            gland development" evidence=IBA] [GO:0031069 "hair follicle
            morphogenesis" evidence=IBA] [GO:0043010 "camera-type eye
            development" evidence=IEA;ISO;IMP] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048468 "cell development" evidence=IEA;ISO;IMP] [GO:0048484
            "enteric nervous system development" evidence=IBA] [GO:0048485
            "sympathetic nervous system development" evidence=IRD] [GO:0048562
            "embryonic organ morphogenesis" evidence=IBA] [GO:0048846 "axon
            extension involved in axon guidance" evidence=IRD] [GO:0048937
            "lateral line nerve glial cell development" evidence=IRD]
            [GO:0050679 "positive regulation of epithelial cell proliferation"
            evidence=IEA;ISO;IMP] [GO:0051090 "regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0060022 "hard palate development" evidence=IBA] [GO:0060023
            "soft palate development" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 RGD:621727
            GO:GO:0016477 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0048468 GO:GO:0048484 GO:GO:0051090 GO:GO:0031069
            GO:GO:0050679 GO:GO:0006590 GO:GO:0002089 GO:GO:0060023
            eggNOG:COG5025 GO:GO:0060022 GO:GO:0030878 HOGENOM:HOG000231286
            GO:GO:0048562 OrthoDB:EOG4001JR EMBL:L13207 IPI:IPI00231011
            PIR:I60921 UniGene:Rn.92407 ProteinModelPortal:Q63250 SMR:Q63250
            STRING:Q63250 PhosphoSite:Q63250 UCSC:RGD:621727 InParanoid:Q63250
            Genevestigator:Q63250 GermOnline:ENSRNOG00000007770 Uniprot:Q63250
        Length = 101

 Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 19/48 (39%), Positives = 29/48 (60%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
             F  ERF +Y  +  +W+NS+RHNL++N  F K  +   + G G+ W L
Sbjct:    32 FITERFAFYRDSPRKWQNSIRHNLTLNDCFVKVPREPGNPGKGNYWTL 79


>UNIPROTKB|Q63250 [details] [associations]
            symbol:Foxe3 "Forkhead box protein E3" species:10116
            "Rattus norvegicus" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0050679 "positive regulation of epithelial cell
            proliferation" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 RGD:621727 GO:GO:0016477
            GO:GO:0043565 GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0048468
            GO:GO:0048484 GO:GO:0051090 GO:GO:0031069 GO:GO:0050679
            GO:GO:0006590 GO:GO:0002089 GO:GO:0060023 eggNOG:COG5025
            GO:GO:0060022 GO:GO:0030878 HOGENOM:HOG000231286 GO:GO:0048562
            OrthoDB:EOG4001JR EMBL:L13207 IPI:IPI00231011 PIR:I60921
            UniGene:Rn.92407 ProteinModelPortal:Q63250 SMR:Q63250 STRING:Q63250
            PhosphoSite:Q63250 UCSC:RGD:621727 InParanoid:Q63250
            Genevestigator:Q63250 GermOnline:ENSRNOG00000007770 Uniprot:Q63250
        Length = 101

 Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 19/48 (39%), Positives = 29/48 (60%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
             F  ERF +Y  +  +W+NS+RHNL++N  F K  +   + G G+ W L
Sbjct:    32 FITERFAFYRDSPRKWQNSIRHNLTLNDCFVKVPREPGNPGKGNYWTL 79


>UNIPROTKB|Q90964 [details] [associations]
            symbol:FOXG1 "Forkhead box protein G1" species:9031 "Gallus
            gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0002052 "positive regulation of neuroblast proliferation"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0009953 "dorsal/ventral pattern formation" evidence=IBA]
            [GO:0016199 "axon midline choice point recognition" evidence=IBA]
            [GO:0021954 "central nervous system neuron development"
            evidence=IBA] [GO:0030902 "hindbrain development" evidence=IBA]
            [GO:0035058 "nonmotile primary cilium assembly" evidence=IBA]
            [GO:0042472 "inner ear morphogenesis" evidence=IBA] [GO:0043584
            "nose development" evidence=IBA] [GO:0045665 "negative regulation
            of neuron differentiation" evidence=IBA] [GO:0045787 "positive
            regulation of cell cycle" evidence=IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0009792 GO:GO:0007346 GO:GO:0043565 GO:GO:0045944
            GO:GO:0016199 GO:GO:0045665 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0042472
            GO:GO:0003690 GO:GO:0030902 GO:GO:0009953 GO:GO:0008134
            GO:GO:0021954 GO:GO:0045787 GO:GO:0002052 GO:GO:0051090
            GO:GO:0035058 GO:GO:0043584 eggNOG:COG5025 GO:GO:0009888
            EMBL:L36814 EMBL:U47275 IPI:IPI00581171 PIR:A55909
            RefSeq:NP_990524.1 UniGene:Gga.657 ProteinModelPortal:Q90964
            SMR:Q90964 STRING:Q90964 GeneID:396110 KEGG:gga:396110 CTD:2290
            HOGENOM:HOG000112629 HOVERGEN:HBG051645 InParanoid:Q90964 KO:K09385
            OrthoDB:EOG4M0F2T NextBio:20816168 Uniprot:Q90964
        Length = 451

 Score = 109 (43.4 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 24/56 (42%), Positives = 31/56 (55%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNL 56
             LT N    F  + FPYY +N   W+NS+RHNLS+N  F K  +     G G+ W L
Sbjct:   164 LTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWML 219


>UNIPROTKB|F1S012 [details] [associations]
            symbol:LOC100522272 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0000287
            "magnesium ion binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR000253 InterPro:IPR001766
            InterPro:IPR008984 InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006
            PROSITE:PS50039 SMART:SM00240 SMART:SM00339 GO:GO:0005634
            GO:GO:0000287 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 Gene3D:2.60.200.20 SUPFAM:SSF49879 OMA:HGQVNNA
            EMBL:FP085448 RefSeq:XP_003357968.1 Ensembl:ENSSSCT00000018643
            GeneID:100522272 Uniprot:F1S012
        Length = 656

 Score = 111 (44.1 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 25/69 (36%), Positives = 40/69 (57%)

Query:     3 LTANLRLFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL--- 56
             LT N  ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +   
Sbjct:   277 LTLN-GIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPA 335

Query:    57 SDMEPVEDA 65
             S+ + +E A
Sbjct:   336 SESKLIEQA 344


>UNIPROTKB|Q01167 [details] [associations]
            symbol:FOXK2 "Forkhead box protein K2" species:9606 "Homo
            sapiens" [GO:0003690 "double-stranded DNA binding" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0009790
            "embryo development" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0000287
            "magnesium ion binding" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IC;IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=NAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
            membrane-bounded organelle" evidence=IDA] InterPro:IPR000253
            InterPro:IPR001766 InterPro:IPR008984 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF00498 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50006 PROSITE:PS50039 SMART:SM00240
            SMART:SM00339 GO:GO:0000287 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 GO:GO:0051090 eggNOG:COG5025
            GO:GO:0009888 HOGENOM:HOG000072588 HOVERGEN:HBG051649 KO:K09404
            EMBL:X60787 EMBL:U58196 EMBL:U58197 EMBL:U58198 EMBL:AC124287
            IPI:IPI00006029 IPI:IPI00220426 IPI:IPI00479612 PIR:A41285
            RefSeq:NP_004505.2 UniGene:Hs.591140 PDB:1JXS PDB:2C6Y PDBsum:1JXS
            PDBsum:2C6Y ProteinModelPortal:Q01167 SMR:Q01167 IntAct:Q01167
            STRING:Q01167 PhosphoSite:Q01167 DMDM:118572648 PaxDb:Q01167
            PRIDE:Q01167 Ensembl:ENST00000335255 Ensembl:ENST00000473637
            GeneID:3607 KEGG:hsa:3607 UCSC:uc002kfm.1 UCSC:uc002kfn.3
            UCSC:uc010diu.3 CTD:3607 GeneCards:GC17P080477 H-InvDB:HIX0014279
            HGNC:HGNC:6036 HPA:HPA027523 MIM:147685 neXtProt:NX_Q01167
            PharmGKB:PA29851 InParanoid:Q01167 OMA:HGQVNNA OrthoDB:EOG4XD3QX
            PhylomeDB:Q01167 ChiTaRS:FOXK2 EvolutionaryTrace:Q01167
            GenomeRNAi:3607 NextBio:14097 ArrayExpress:Q01167 Bgee:Q01167
            CleanEx:HS_FOXK2 Genevestigator:Q01167 GermOnline:ENSG00000141568
            Uniprot:Q01167
        Length = 660

 Score = 111 (44.1 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 25/69 (36%), Positives = 40/69 (57%)

Query:     3 LTANLRLFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL--- 56
             LT N  ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +   
Sbjct:   279 LTLN-GIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPA 337

Query:    57 SDMEPVEDA 65
             S+ + +E A
Sbjct:   338 SESKLIEQA 346


>ZFIN|ZDB-GENE-040426-2094 [details] [associations]
            symbol:foxd1 "forkhead box D1" species:7955 "Danio
            rerio" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0090184 "positive regulation of kidney
            development" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0048485 "sympathetic nervous system development"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0060678 "dichotomous subdivision of terminal units involved in
            ureteric bud branching" evidence=IBA] [GO:0030513 "positive
            regulation of BMP signaling pathway" evidence=IBA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0050935 "iridophore differentiation"
            evidence=IBA] [GO:0001755 "neural crest cell migration"
            evidence=IBA] [GO:0030318 "melanocyte differentiation"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0048846 "axon extension involved in axon
            guidance" evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            [GO:0048937 "lateral line nerve glial cell development"
            evidence=IBA] [GO:0048484 "enteric nervous system development"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 ZFIN:ZDB-GENE-040426-2094
            GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0030513
            GO:GO:0051216 GO:GO:0008134 GO:GO:0007389 GO:GO:0048485
            GO:GO:0030318 GO:GO:0048484 GO:GO:0051090 GO:GO:0090184
            GO:GO:0048846 KO:K09397 GO:GO:0048937 HOVERGEN:HBG051641
            GO:GO:0060678 GO:GO:0050935 HSSP:Q01167 EMBL:BC067138
            IPI:IPI00501340 RefSeq:NP_998078.1 UniGene:Dr.82970
            ProteinModelPortal:Q6NXD6 SMR:Q6NXD6 GeneID:405849 KEGG:dre:405849
            CTD:405849 InParanoid:Q6NXD6 NextBio:20817811 Uniprot:Q6NXD6
        Length = 343

 Score = 107 (42.7 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 23/55 (41%), Positives = 31/55 (56%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNLSDMEPVE 63
             F   RFPYY +    W+NS+RHNLS+N  F K  +   + G G+ W L D E  +
Sbjct:   103 FISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL-DPESAD 156


>UNIPROTKB|Q9PSY4 [details] [associations]
            symbol:foxd1 "Forkhead box protein D1" species:8355
            "Xenopus laevis" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA;IMP] [GO:0001755
            "neural crest cell migration" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0007398 "ectoderm development" evidence=IMP]
            [GO:0007399 "nervous system development" evidence=IMP] [GO:0007498
            "mesoderm development" evidence=IMP] [GO:0030336 "negative
            regulation of cell migration" evidence=IMP] [GO:0030900 "forebrain
            development" evidence=IMP] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0007498 GO:GO:0001755 GO:GO:0043565 GO:GO:0030900
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0000122 GO:GO:0030336 GO:GO:0007398 KO:K09397 HSSP:Q63245
            CTD:2297 HOVERGEN:HBG051641 EMBL:AF072889 EMBL:AJ011652
            EMBL:BC108577 RefSeq:NP_001079052.1 UniGene:Xl.66
            ProteinModelPortal:Q9PSY4 SMR:Q9PSY4 GeneID:373583 KEGG:xla:373583
            Xenbase:XB-GENE-865762 Uniprot:Q9PSY4
        Length = 345

 Score = 107 (42.7 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 23/55 (41%), Positives = 31/55 (56%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNLSDMEPVE 63
             F   RFPYY +    W+NS+RHNLS+N  F K  +   + G G+ W L D E  +
Sbjct:    97 FISSRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL-DPESAD 150


>UNIPROTKB|Q90WN4 [details] [associations]
            symbol:foxd2 "Forkhead box protein D2" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            KO:K09397 HSSP:Q63245 HOVERGEN:HBG051641 CTD:2306 EMBL:AJ344435
            EMBL:BC108569 RefSeq:NP_001079322.1 UniGene:Xl.12079
            ProteinModelPortal:Q90WN4 SMR:Q90WN4 GeneID:378641 KEGG:xla:378641
            Xenbase:XB-GENE-865311 Uniprot:Q90WN4
        Length = 346

 Score = 107 (42.7 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 23/55 (41%), Positives = 31/55 (56%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNLSDMEPVE 63
             F   RFPYY +    W+NS+RHNLS+N  F K  +   + G G+ W L D E  +
Sbjct:   107 FISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL-DPESAD 160


>UNIPROTKB|F1NK07 [details] [associations]
            symbol:F1NK07 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 EMBL:AADN02014756 IPI:IPI00576473
            Ensembl:ENSGALT00000037124 OMA:SLIYARE Uniprot:F1NK07
        Length = 347

 Score = 107 (42.7 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 20/45 (44%), Positives = 28/45 (62%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             E FP+Y ++   W+NS+RHNLS+N  FRK  +     G G+ W L
Sbjct:   115 ENFPFYKRSKAGWQNSIRHNLSLNDCFRKVPRDEDDPGKGNYWTL 159


>FB|FBgn0029504 [details] [associations]
            symbol:CHES-1-like "Checkpoint suppressor homologue"
            species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0006911
            "phagocytosis, engulfment" evidence=IMP] [GO:0031571 "mitotic G1
            DNA damage checkpoint" evidence=IGI] [GO:0071456 "cellular response
            to hypoxia" evidence=IMP] [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=IDA] [GO:0035050
            "embryonic heart tube development" evidence=IMP] [GO:0051302
            "regulation of cell division" evidence=IMP] [GO:0009790 "embryo
            development" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005525
            GO:GO:0006911 EMBL:AE014298 GO:GO:0003924 GO:GO:0006184
            GO:GO:0071456 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 GO:GO:0000976 GO:GO:0051090
            GO:GO:0031571 GO:GO:0009888 GeneTree:ENSGT00700000104051
            FlyBase:FBgn0029504 ChiTaRS:CHES-1-like RefSeq:NP_511071.3
            RefSeq:NP_996362.2 UniGene:Dm.31076 SMR:Q9W3Q5 STRING:Q9W3Q5
            EnsemblMetazoa:FBtr0071079 EnsemblMetazoa:FBtr0112946
            EnsemblMetazoa:FBtr0333203 GeneID:31678 KEGG:dme:Dmel_CG12690
            UCSC:CG12690-RA CTD:31678 InParanoid:Q9W3Q5 OMA:DSNCASS
            GenomeRNAi:31678 NextBio:774789 Uniprot:Q9W3Q5
        Length = 1268

 Score = 114 (45.2 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 22/48 (45%), Positives = 29/48 (60%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA-SQGAGHLWNLSDME 60
             + FPY+    + WKNSVRHNLS+N  F K  KA + G G LW +   +
Sbjct:   732 QHFPYFKTAPNGWKNSVRHNLSLNKSFVKVEKAPNMGKGSLWRVEPQQ 779


>RGD|2619 [details] [associations]
            symbol:Foxg1 "forkhead box G1" species:10116 "Rattus norvegicus"
          [GO:0002052 "positive regulation of neuroblast proliferation"
          evidence=ISO;IBA] [GO:0003674 "molecular_function" evidence=ND]
          [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
          "RNA polymerase II distal enhancer sequence-specific DNA binding
          transcription factor activity" evidence=IBA] [GO:0005575
          "cellular_component" evidence=ND] [GO:0005634 "nucleus" evidence=ISO]
          [GO:0005667 "transcription factor complex" evidence=IBA] [GO:0007346
          "regulation of mitotic cell cycle" evidence=ISO;IBA] [GO:0007420
          "brain development" evidence=IEP] [GO:0007568 "aging" evidence=IEP]
          [GO:0008134 "transcription factor binding" evidence=IBA] [GO:0008301
          "DNA binding, bending" evidence=IBA] [GO:0009792 "embryo development
          ending in birth or egg hatching" evidence=IBA] [GO:0009888 "tissue
          development" evidence=IBA] [GO:0009953 "dorsal/ventral pattern
          formation" evidence=ISO;IBA] [GO:0016199 "axon midline choice point
          recognition" evidence=ISO;IBA] [GO:0021954 "central nervous system
          neuron development" evidence=ISO;IBA] [GO:0022008 "neurogenesis"
          evidence=ISO] [GO:0030900 "forebrain development" evidence=IEA;ISO]
          [GO:0030902 "hindbrain development" evidence=IBA] [GO:0035058
          "nonmotile primary cilium assembly" evidence=IBA] [GO:0042472 "inner
          ear morphogenesis" evidence=ISO;IBA] [GO:0043565 "sequence-specific
          DNA binding" evidence=IEA] [GO:0043584 "nose development"
          evidence=IBA] [GO:0045665 "negative regulation of neuron
          differentiation" evidence=ISO;IBA] [GO:0045787 "positive regulation
          of cell cycle" evidence=ISO;IBA] [GO:0045892 "negative regulation of
          transcription, DNA-dependent" evidence=IEA;ISO] [GO:0045944 "positive
          regulation of transcription from RNA polymerase II promoter"
          evidence=IBA] [GO:0048667 "cell morphogenesis involved in neuron
          differentiation" evidence=ISO] [GO:0051090 "regulation of
          sequence-specific DNA binding transcription factor activity"
          evidence=IBA] [GO:2000177 "regulation of neural precursor cell
          proliferation" evidence=ISO] InterPro:IPR001766 InterPro:IPR018122
          Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
          PROSITE:PS50039 SMART:SM00339 RGD:2619 GO:GO:0009792 GO:GO:0007346
          GO:GO:0007568 GO:GO:0043565 GO:GO:0045944 GO:GO:0016199 GO:GO:0045665
          Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
          GO:GO:0008301 GO:GO:0042472 GO:GO:0003690 GO:GO:0030902 GO:GO:0009953
          GO:GO:0008134 GO:GO:0021954 GO:GO:0045787 GO:GO:0002052 GO:GO:0051090
          GO:GO:0035058 GO:GO:0043584 GO:GO:0009888 CTD:2290 HOVERGEN:HBG051645
          KO:K09385 EMBL:M87634 IPI:IPI00204255 PIR:JH0672 RefSeq:NP_036692.1
          UniGene:Rn.9864 ProteinModelPortal:Q00939 SMR:Q00939 STRING:Q00939
          PhosphoSite:Q00939 PRIDE:Q00939 GeneID:24370 KEGG:rno:24370
          UCSC:RGD:2619 eggNOG:NOG242525 NextBio:603113 Genevestigator:Q00939
          Uniprot:Q00939
        Length = 480

 Score = 109 (43.4 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 24/56 (42%), Positives = 31/56 (55%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNL 56
             LT N    F  + FPYY +N   W+NS+RHNLS+N  F K  +     G G+ W L
Sbjct:   193 LTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWML 248


>UNIPROTKB|E2RNB4 [details] [associations]
            symbol:FOXA3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0009267 "cellular response to starvation" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001678 "cellular
            glucose homeostasis" evidence=IEA] [GO:0019904 "protein domain
            specific binding" evidence=IEA] [GO:0008134 "transcription factor
            binding" evidence=IEA] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007283 GO:GO:0044212
            GO:GO:0009267 GO:GO:0001678 GeneTree:ENSGT00700000104475
            InterPro:IPR018533 Pfam:PF09354 CTD:3171 KO:K08038 OMA:VYYQGVY
            EMBL:AAEX03000870 RefSeq:XP_541549.3 ProteinModelPortal:E2RNB4
            Ensembl:ENSCAFT00000007001 GeneID:484434 KEGG:cfa:484434
            NextBio:20858576 Uniprot:E2RNB4
        Length = 350

 Score = 107 (42.7 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FPYY +N  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   152 FPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWAL 194


>UNIPROTKB|P55318 [details] [associations]
            symbol:FOXA3 "Hepatocyte nuclear factor 3-gamma"
            species:9606 "Homo sapiens" [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0001678 "cellular glucose homeostasis" evidence=IBA;TAS]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007420 "brain
            development" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009267 "cellular response to starvation"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0019904 "protein domain specific binding" evidence=IBA]
            [GO:0021999 "neural plate anterior/posterior regionalization"
            evidence=IBA] [GO:0048665 "neuron fate specification" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0060441
            "epithelial tube branching involved in lung morphogenesis"
            evidence=IRD] [GO:0060487 "lung epithelial cell differentiation"
            evidence=IRD] [GO:0070368 "positive regulation of hepatocyte
            differentiation" evidence=IBA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IMP] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA;TAS] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0005634
            "nucleus" evidence=TAS] [GO:0031018 "endocrine pancreas
            development" evidence=TAS] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0019904 Reactome:REACT_111045 GO:GO:0008285 GO:GO:0007420
            GO:GO:0043565 Pathway_Interaction_DB:hnf3apathway GO:GO:0045944
            EMBL:CH471126 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007283
            GO:GO:0016568 Pathway_Interaction_DB:hnf3bpathway GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0044212
            GO:GO:0003690 GO:GO:0009267 GO:GO:0008134 GO:GO:0031018
            GO:GO:0048665 GO:GO:0051090 GO:GO:0001678 GO:GO:0021999
            eggNOG:COG5025 InterPro:IPR018533 Pfam:PF09354 HOGENOM:HOG000231817
            HOVERGEN:HBG006621 Pathway_Interaction_DB:hnf3pathway CTD:3171
            KO:K08038 OMA:VYYQGVY OrthoDB:EOG43R3NB GO:GO:0070368 EMBL:L12141
            EMBL:AF176114 EMBL:AF176113 EMBL:BT006720 EMBL:AK223473
            EMBL:EU275778 EMBL:BC016024 IPI:IPI00024388 PIR:C48924
            RefSeq:NP_004488.2 UniGene:Hs.36137 PDB:1VTN PDBsum:1VTN
            ProteinModelPortal:P55318 SMR:P55318 IntAct:P55318 STRING:P55318
            PhosphoSite:P55318 DMDM:8247938 PaxDb:P55318 PRIDE:P55318
            DNASU:3171 Ensembl:ENST00000302177 GeneID:3171 KEGG:hsa:3171
            UCSC:uc002pdr.3 GeneCards:GC19P046368 HGNC:HGNC:5023 HPA:CAB015154
            MIM:602295 neXtProt:NX_P55318 PharmGKB:PA201092 InParanoid:P55318
            PhylomeDB:P55318 GenomeRNAi:3171 NextBio:12574 Bgee:P55318
            CleanEx:HS_FOXA3 Genevestigator:P55318 GermOnline:ENSG00000170608
            Uniprot:P55318
        Length = 350

 Score = 107 (42.7 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FPYY +N  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   151 FPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWAL 193


>UNIPROTKB|F1RM41 [details] [associations]
            symbol:FOXA3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0009267 "cellular
            response to starvation" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0001678 "cellular glucose homeostasis"
            evidence=IEA] [GO:0019904 "protein domain specific binding"
            evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007283 GO:GO:0044212
            GO:GO:0009267 GO:GO:0001678 GeneTree:ENSGT00700000104475
            InterPro:IPR018533 Pfam:PF09354 KO:K08038 OMA:VYYQGVY EMBL:FP102597
            RefSeq:XP_003127277.1 UniGene:Ssc.18674 Ensembl:ENSSSCT00000003431
            GeneID:100512416 KEGG:ssc:100512416 Uniprot:F1RM41
        Length = 350

 Score = 107 (42.7 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FPYY +N  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   152 FPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWAL 194


>MGI|MGI:1347464 [details] [associations]
            symbol:Foxg1 "forkhead box G1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0002052 "positive
            regulation of neuroblast proliferation" evidence=IMP] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007346 "regulation of mitotic cell
            cycle" evidence=IMP] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0009953 "dorsal/ventral pattern formation" evidence=IMP]
            [GO:0016199 "axon midline choice point recognition" evidence=IMP]
            [GO:0021954 "central nervous system neuron development"
            evidence=IMP] [GO:0022008 "neurogenesis" evidence=IDA] [GO:0030900
            "forebrain development" evidence=IMP] [GO:0030902 "hindbrain
            development" evidence=IBA] [GO:0035058 "nonmotile primary cilium
            assembly" evidence=IBA] [GO:0042472 "inner ear morphogenesis"
            evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0043584 "nose development" evidence=IBA]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=IMP] [GO:0045787 "positive regulation of cell cycle"
            evidence=IMP] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048667 "cell morphogenesis involved in neuron differentiation"
            evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:2000177
            "regulation of neural precursor cell proliferation" evidence=IGI]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            MGI:MGI:1347464 GO:GO:0009792 GO:GO:0007346 GO:GO:0043565
            GO:GO:0045944 GO:GO:0016199 GO:GO:0030900 GO:GO:0045665
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000122 GO:GO:0008301 GO:GO:0042472 GO:GO:0003690
            GO:GO:0030902 GO:GO:0009953 GO:GO:0008134 GO:GO:0021954
            GO:GO:0045787 GO:GO:0002052 GO:GO:0051090 GO:GO:0035058
            GO:GO:0043584 eggNOG:COG5025 GO:GO:0009888 CTD:2290
            HOGENOM:HOG000112629 HOVERGEN:HBG051645 KO:K09385 OrthoDB:EOG4M0F2T
            OMA:YSTMLTQ EMBL:U36760 EMBL:BC046958 IPI:IPI00122768
            RefSeq:NP_001153584.1 RefSeq:NP_032267.1 UniGene:Mm.4704
            ProteinModelPortal:Q60987 SMR:Q60987 STRING:Q60987
            PhosphoSite:Q60987 PRIDE:Q60987 Ensembl:ENSMUST00000021333
            Ensembl:ENSMUST00000179669 GeneID:15228 KEGG:mmu:15228
            GeneTree:ENSGT00700000104051 InParanoid:Q60987 ChiTaRS:FOXG1
            NextBio:287819 Bgee:Q60987 CleanEx:MM_FOXG1 Genevestigator:Q60987
            GermOnline:ENSMUSG00000020950 Uniprot:Q60987
        Length = 481

 Score = 109 (43.4 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 24/56 (42%), Positives = 31/56 (55%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNL 56
             LT N    F  + FPYY +N   W+NS+RHNLS+N  F K  +     G G+ W L
Sbjct:   194 LTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWML 249


>UNIPROTKB|Q3Y598 [details] [associations]
            symbol:FOXA3 "Hepatocyte nuclear factor 3-gamma"
            species:9913 "Bos taurus" [GO:0070368 "positive regulation of
            hepatocyte differentiation" evidence=IBA] [GO:0060487 "lung
            epithelial cell differentiation" evidence=IRD] [GO:0060441
            "epithelial tube branching involved in lung morphogenesis"
            evidence=IRD] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0048665
            "neuron fate specification" evidence=IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0021999 "neural plate anterior/posterior
            regionalization" evidence=IBA] [GO:0019904 "protein domain specific
            binding" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0009267 "cellular response to starvation"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0008285 "negative regulation of cell proliferation"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0007420 "brain development" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0001678
            "cellular glucose homeostasis" evidence=IBA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IEA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0019904 GO:GO:0008285 GO:GO:0007420
            GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0007283 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0009790 GO:GO:0044212 GO:GO:0003690 GO:GO:0009267
            GO:GO:0008134 GO:GO:0048665 GO:GO:0051090 GO:GO:0001678
            GO:GO:0021999 eggNOG:COG5025 GeneTree:ENSGT00700000104475
            InterPro:IPR018533 Pfam:PF09354 HOGENOM:HOG000231817
            HOVERGEN:HBG006621 EMBL:DQ157763 EMBL:BC116076 IPI:IPI00698928
            RefSeq:NP_001028291.1 UniGene:Bt.49749 ProteinModelPortal:Q3Y598
            SMR:Q3Y598 Ensembl:ENSBTAT00000016056 GeneID:503622 KEGG:bta:503622
            CTD:3171 InParanoid:Q3Y598 KO:K08038 OMA:VYYQGVY OrthoDB:EOG43R3NB
            NextBio:20866246 GO:GO:0070368 Uniprot:Q3Y598
        Length = 351

 Score = 107 (42.7 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FPYY +N  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   152 FPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWAL 194


>ZFIN|ZDB-GENE-980526-404 [details] [associations]
            symbol:foxa2 "forkhead box A2" species:7955 "Danio
            rerio" [GO:0019904 "protein domain specific binding"
            evidence=IEA;IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
            [GO:0008134 "transcription factor binding" evidence=IEA;IBA]
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0007418 "ventral
            midline development" evidence=IMP] [GO:0048319 "axial mesoderm
            morphogenesis" evidence=IGI] [GO:0033504 "floor plate development"
            evidence=IMP] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0031018 "endocrine
            pancreas development" evidence=IBA] [GO:0021904 "dorsal/ventral
            neural tube patterning" evidence=IBA] [GO:0008301 "DNA binding,
            bending" evidence=IBA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IBA] [GO:0007596 "blood coagulation"
            evidence=IBA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IBA] [GO:0060441 "epithelial tube branching
            involved in lung morphogenesis" evidence=IBA] [GO:0001705 "ectoderm
            formation" evidence=IBA] [GO:0021533 "cell differentiation in
            hindbrain" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0060487 "lung epithelial cell differentiation"
            evidence=IBA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IBA] [GO:0003705 "RNA polymerase II
            distal enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0048665 "neuron fate specification" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0021779 "oligodendrocyte cell fate commitment" evidence=IMP]
            [GO:0032289 "central nervous system myelin formation" evidence=IMP]
            [GO:0007492 "endoderm development" evidence=IGI;IMP] [GO:0005634
            "nucleus" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-980526-404 GO:GO:0019904 GO:GO:0009952 GO:GO:0007596
            GO:GO:0043565 GO:GO:0045665 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0003690
            GO:GO:0045666 GO:GO:0008134 GO:GO:0031018 GO:GO:0007492
            GO:GO:0060487 GO:GO:0048665 GO:GO:0051090 GO:GO:0021904
            GO:GO:0060441 GO:GO:0033504 GO:GO:0007418 GO:GO:0048319
            GO:GO:0032289 GO:GO:0021533 InterPro:IPR018533 Pfam:PF09354
            HOVERGEN:HBG006621 GO:GO:0001705 GO:GO:0021779 EMBL:BC086703
            IPI:IPI00502799 UniGene:Dr.483 ProteinModelPortal:Q5PRD6 SMR:Q5PRD6
            STRING:Q5PRD6 InParanoid:Q5PRD6 ArrayExpress:Q5PRD6 Uniprot:Q5PRD6
        Length = 409

 Score = 108 (43.1 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FP+Y QN  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   185 FPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTL 227


>UNIPROTKB|E1C5H4 [details] [associations]
            symbol:FOXN3 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00700000104051
            EMBL:AADN02003614 IPI:IPI00820058 Ensembl:ENSGALT00000037635
            Uniprot:E1C5H4
        Length = 306

 Score = 106 (42.4 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 24/44 (54%), Positives = 27/44 (61%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK-ASQ--GAGHLW 54
             E FPY+      WKNSVRHNLS+N  F+K  K  SQ  G G LW
Sbjct:   146 EHFPYFANAPTGWKNSVRHNLSLNKCFKKVDKDRSQSIGKGSLW 189


>MGI|MGI:1347477 [details] [associations]
            symbol:Foxa3 "forkhead box A3" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001678 "cellular glucose
            homeostasis" evidence=IMP] [GO:0003677 "DNA binding"
            evidence=ISO;IDA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISO;IMP] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IMP] [GO:0007420 "brain
            development" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=ISO;IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009267 "cellular response to starvation"
            evidence=IMP] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0019904
            "protein domain specific binding" evidence=IBA] [GO:0021999 "neural
            plate anterior/posterior regionalization" evidence=IBA] [GO:0030154
            "cell differentiation" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IDA] [GO:0044212 "transcription regulatory
            region DNA binding" evidence=ISO] [GO:0044428 "nuclear part"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO;IGI] [GO:0048665
            "neuron fate specification" evidence=IBA] [GO:0051090 "regulation
            of sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0070368 "positive regulation of hepatocyte
            differentiation" evidence=ISO;IBA] Reactome:REACT_13641
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 MGI:MGI:1347477
            GO:GO:0005829 GO:GO:0019904 GO:GO:0008285 GO:GO:0007420
            GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0007283 GO:GO:0016568 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000122 GO:GO:0008301 GO:GO:0009790 GO:GO:0044212
            Reactome:REACT_127416 GO:GO:0003690 GO:GO:0009267 GO:GO:0008134
            GO:GO:0031018 GO:GO:0048665 GO:GO:0051090 GO:GO:0001678
            GO:GO:0021999 eggNOG:COG5025 GeneTree:ENSGT00700000104475
            InterPro:IPR018533 Pfam:PF09354 HOGENOM:HOG000231817
            HOVERGEN:HBG006621 CTD:3171 KO:K08038 OMA:VYYQGVY OrthoDB:EOG43R3NB
            GO:GO:0070368 EMBL:X74938 IPI:IPI00119677 PIR:C54258
            RefSeq:NP_032286.1 UniGene:Mm.42260 ProteinModelPortal:P35584
            SMR:P35584 STRING:P35584 PhosphoSite:P35584 PRIDE:P35584
            Ensembl:ENSMUST00000036018 GeneID:15377 KEGG:mmu:15377
            UCSC:uc009fkd.1 InParanoid:P35584 NextBio:288034 Bgee:P35584
            CleanEx:MM_FOXA3 Genevestigator:P35584
            GermOnline:ENSMUSG00000040891 Uniprot:P35584
        Length = 353

 Score = 107 (42.7 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FPYY +N  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   153 FPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWAL 195


>ZFIN|ZDB-GENE-031126-3 [details] [associations]
            symbol:foxi3a "forkhead box I3a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0005667 "transcription factor
            complex" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003690 "double-stranded
            DNA binding" evidence=IBA] [GO:0043049 "otic placode formation"
            evidence=IBA] [GO:0009913 "epidermal cell differentiation"
            evidence=IMP] [GO:0009957 "epidermal cell fate specification"
            evidence=IDA;IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0030104 "water homeostasis"
            evidence=IMP] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 ZFIN:ZDB-GENE-031126-3 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0030104 GO:GO:0051090 GO:GO:0043049 GO:GO:0009957 HSSP:Q99958
            HOVERGEN:HBG067944 EMBL:AY331583 IPI:IPI00845088 UniGene:Dr.29102
            ProteinModelPortal:Q7T1C1 SMR:Q7T1C1 STRING:Q7T1C1 PRIDE:Q7T1C1
            InParanoid:Q7T1C1 Bgee:Q7T1C1 Uniprot:Q7T1C1
        Length = 353

 Score = 107 (42.7 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 19/45 (42%), Positives = 29/45 (64%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
             + FP+YN++   W+NS+RHNLS+N  F K  +  +  G G+ W L
Sbjct:   148 DNFPFYNKSKASWQNSIRHNLSLNDCFMKVPRDDSDPGKGNYWTL 192


>RGD|2809 [details] [associations]
            symbol:Foxa3 "forkhead box A3" species:10116 "Rattus norvegicus"
          [GO:0001678 "cellular glucose homeostasis" evidence=ISO;IBA;TAS]
          [GO:0003677 "DNA binding" evidence=ISO;IDA;TAS] [GO:0003690
          "double-stranded DNA binding" evidence=IBA] [GO:0003700
          "sequence-specific DNA binding transcription factor activity"
          evidence=ISO;IDA;TAS] [GO:0003705 "RNA polymerase II distal enhancer
          sequence-specific DNA binding transcription factor activity"
          evidence=IBA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
          "transcription factor complex" evidence=IBA] [GO:0006355 "regulation
          of transcription, DNA-dependent" evidence=ISO;IDA] [GO:0006357
          "regulation of transcription from RNA polymerase II promoter"
          evidence=ISO] [GO:0007283 "spermatogenesis" evidence=ISO] [GO:0007420
          "brain development" evidence=IBA] [GO:0008134 "transcription factor
          binding" evidence=IBA] [GO:0008285 "negative regulation of cell
          proliferation" evidence=IMP] [GO:0008301 "DNA binding, bending"
          evidence=IBA] [GO:0009267 "cellular response to starvation"
          evidence=ISO;IBA] [GO:0009790 "embryo development" evidence=IBA]
          [GO:0016568 "chromatin modification" evidence=IEA] [GO:0019904
          "protein domain specific binding" evidence=IBA] [GO:0021999 "neural
          plate anterior/posterior regionalization" evidence=IBA] [GO:0031667
          "response to nutrient levels" evidence=IEP] [GO:0043565
          "sequence-specific DNA binding" evidence=IEA;ISO] [GO:0044212
          "transcription regulatory region DNA binding" evidence=ISO]
          [GO:0044428 "nuclear part" evidence=IDA] [GO:0045944 "positive
          regulation of transcription from RNA polymerase II promoter"
          evidence=ISO;IDA] [GO:0048665 "neuron fate specification"
          evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
          binding transcription factor activity" evidence=IBA] [GO:0060441
          "epithelial tube branching involved in lung morphogenesis"
          evidence=IRD] [GO:0060487 "lung epithelial cell differentiation"
          evidence=IRD] [GO:0070368 "positive regulation of hepatocyte
          differentiation" evidence=IMP] InterPro:IPR001766 InterPro:IPR013638
          InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
          PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
          RGD:2809 GO:GO:0019904 GO:GO:0008285 GO:GO:0007420 GO:GO:0043565
          GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007283
          GO:GO:0016568 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
          GO:GO:0044212 GO:GO:0003690 GO:GO:0009267 GO:GO:0008134 GO:GO:0048665
          GO:GO:0051090 GO:GO:0001678 GO:GO:0021999 eggNOG:COG5025
          InterPro:IPR018533 Pfam:PF09354 HOGENOM:HOG000231817
          HOVERGEN:HBG006621 CTD:3171 KO:K08038 OrthoDB:EOG43R3NB GO:GO:0070368
          EMBL:L09648 IPI:IPI00213519 PIR:S35090 RefSeq:NP_058773.1
          UniGene:Rn.10949 ProteinModelPortal:P32183 SMR:P32183 STRING:P32183
          PRIDE:P32183 GeneID:25100 KEGG:rno:25100 InParanoid:P32183
          NextBio:605413 Genevestigator:P32183 GermOnline:ENSRNOG00000014256
          Uniprot:P32183
        Length = 354

 Score = 107 (42.7 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FPYY +N  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   153 FPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWAL 195


>UNIPROTKB|G3V7T9 [details] [associations]
            symbol:Foxa3 "Forkhead box A3, isoform CRA_b" species:10116
            "Rattus norvegicus" [GO:0001678 "cellular glucose homeostasis"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IEA]
            [GO:0009267 "cellular response to starvation" evidence=IEA]
            [GO:0019904 "protein domain specific binding" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 RGD:2809 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:CH473979
            GeneTree:ENSGT00700000104475 InterPro:IPR018533 Pfam:PF09354
            OMA:VYYQGVY UniGene:Rn.10949 Ensembl:ENSRNOT00000019219
            Uniprot:G3V7T9
        Length = 354

 Score = 107 (42.7 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FPYY +N  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   153 FPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWAL 195


>UNIPROTKB|P55316 [details] [associations]
            symbol:FOXG1 "Forkhead box protein G1" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0007568 "aging" evidence=IEA] [GO:0030900 "forebrain
            development" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0002052 "positive regulation of neuroblast
            proliferation" evidence=IBA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0009953 "dorsal/ventral pattern formation" evidence=IBA]
            [GO:0016199 "axon midline choice point recognition" evidence=IBA]
            [GO:0021954 "central nervous system neuron development"
            evidence=IBA] [GO:0030902 "hindbrain development" evidence=IBA]
            [GO:0035058 "nonmotile primary cilium assembly" evidence=IBA]
            [GO:0042472 "inner ear morphogenesis" evidence=IBA] [GO:0043584
            "nose development" evidence=IBA] [GO:0045665 "negative regulation
            of neuron differentiation" evidence=IBA] [GO:0045787 "positive
            regulation of cell cycle" evidence=IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0003677 "DNA
            binding" evidence=TAS] [GO:0007420 "brain development"
            evidence=TAS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0009792 GO:GO:0007346 GO:GO:0045892
            GO:GO:0043565 GO:GO:0045944 GO:GO:0016199 GO:GO:0030900
            GO:GO:0045665 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0042472 EMBL:CH471078
            GO:GO:0003690 GO:GO:0030902 GO:GO:0009953 GO:GO:0008134
            Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0021954
            GO:GO:0045787 GO:GO:0002052 GO:GO:0051090 GO:GO:0035058
            GO:GO:0043584 eggNOG:COG5025 GO:GO:0009888 CTD:2290
            HOGENOM:HOG000112629 HOVERGEN:HBG051645 KO:K09385 OrthoDB:EOG4M0F2T
            EMBL:X74142 EMBL:X74143 EMBL:X74144 EMBL:X78202 EMBL:AL049777
            EMBL:BC050072 IPI:IPI00024386 PIR:B54743 PIR:I37451
            RefSeq:NP_005240.3 UniGene:Hs.632336 UniGene:Hs.740590
            UniGene:Hs.741222 ProteinModelPortal:P55316 SMR:P55316
            IntAct:P55316 MINT:MINT-1407364 STRING:P55316 PhosphoSite:P55316
            DMDM:152031604 PaxDb:P55316 PRIDE:P55316 Ensembl:ENST00000313071
            Ensembl:ENST00000382535 GeneID:2290 KEGG:hsa:2290 UCSC:uc001wqe.3
            GeneCards:GC14P029235 HGNC:HGNC:3811 MIM:164874 MIM:613454
            neXtProt:NX_P55316 Orphanet:261229 Orphanet:261144 Orphanet:3095
            PharmGKB:PA162388806 PharmGKB:PA28228 InParanoid:P55316 OMA:YSTMLTQ
            PhylomeDB:P55316 GenomeRNAi:2290 NextBio:9307 Bgee:P55316
            CleanEx:HS_FOXG1 Genevestigator:P55316 GermOnline:ENSG00000176165
            Uniprot:P55316
        Length = 489

 Score = 109 (43.4 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 24/56 (42%), Positives = 31/56 (55%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNL 56
             LT N    F  + FPYY +N   W+NS+RHNLS+N  F K  +     G G+ W L
Sbjct:   202 LTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWML 257


>UNIPROTKB|F1MBH4 [details] [associations]
            symbol:FOXF1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0090131 "mesenchyme migration" evidence=IEA]
            [GO:0072189 "ureter development" evidence=IEA] [GO:0071407
            "cellular response to organic cyclic compound" evidence=IEA]
            [GO:0071345 "cellular response to cytokine stimulus" evidence=IEA]
            [GO:0061030 "epithelial cell differentiation involved in mammary
            gland alveolus development" evidence=IEA] [GO:0060841 "venous blood
            vessel development" evidence=IEA] [GO:0060463 "lung lobe
            morphogenesis" evidence=IEA] [GO:0060461 "right lung morphogenesis"
            evidence=IEA] [GO:0060446 "branching involved in open tracheal
            system development" evidence=IEA] [GO:0060441 "epithelial tube
            branching involved in lung morphogenesis" evidence=IEA] [GO:0060438
            "trachea development" evidence=IEA] [GO:0060426 "lung vasculature
            development" evidence=IEA] [GO:0051150 "regulation of smooth muscle
            cell differentiation" evidence=IEA] [GO:0051145 "smooth muscle cell
            differentiation" evidence=IEA] [GO:0050728 "negative regulation of
            inflammatory response" evidence=IEA] [GO:0048617 "embryonic foregut
            morphogenesis" evidence=IEA] [GO:0048613 "embryonic ectodermal
            digestive tract morphogenesis" evidence=IEA] [GO:0048371 "lateral
            mesodermal cell differentiation" evidence=IEA] [GO:0048286 "lung
            alveolus development" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045198 "establishment of epithelial cell
            apical/basal polarity" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043305 "negative
            regulation of mast cell degranulation" evidence=IEA] [GO:0031016
            "pancreas development" evidence=IEA] [GO:0030335 "positive
            regulation of cell migration" evidence=IEA] [GO:0030198
            "extracellular matrix organization" evidence=IEA] [GO:0016337
            "cell-cell adhesion" evidence=IEA] [GO:0014822 "detection of
            wounding" evidence=IEA] [GO:0010811 "positive regulation of
            cell-substrate adhesion" evidence=IEA] [GO:0007494 "midgut
            development" evidence=IEA] [GO:0007368 "determination of left/right
            symmetry" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003214
            "cardiac left ventricle morphogenesis" evidence=IEA] [GO:0003197
            "endocardial cushion development" evidence=IEA] [GO:0002053
            "positive regulation of mesenchymal cell proliferation"
            evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001701
            "in utero embryonic development" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0050728
            GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0030198
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0007494 GO:GO:0000122 GO:GO:0001756 GO:GO:0044212
            GO:GO:0048286 GO:GO:0016337 GO:GO:0060841 GO:GO:0007368
            GO:GO:0051145 GO:GO:0003197 GO:GO:0030335 GO:GO:0001570
            GO:GO:0010811 GO:GO:0031016 GO:GO:0071407 GO:GO:0060438
            GO:GO:0007224 GO:GO:0048617 GO:GO:0002053 GO:GO:0051150
            GO:GO:0060441 GO:GO:0045198 GO:GO:0003214 GO:GO:0060446
            GO:GO:0071345 GO:GO:0043305 GO:GO:0060426
            GeneTree:ENSGT00690000101636 GO:GO:0060463 GO:GO:0061030
            OMA:MTAEVQQ GO:GO:0014822 GO:GO:0048613 GO:GO:0048371 GO:GO:0090131
            GO:GO:0060461 GO:GO:0072189 EMBL:DAAA02046218 IPI:IPI00692837
            Ensembl:ENSBTAT00000000009 Uniprot:F1MBH4
        Length = 415

 Score = 108 (43.1 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNL 56
             F + RFP++  +   WKNSVRHNLS+N  F K  K     G GH W +
Sbjct:   113 FLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTI 160


>UNIPROTKB|P85037 [details] [associations]
            symbol:FOXK1 "Forkhead box protein K1" species:9606 "Homo
            sapiens" [GO:0007517 "muscle organ development" evidence=IEA]
            [GO:0030154 "cell differentiation" evidence=IEA] [GO:0030308
            "negative regulation of cell growth" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0000287 "magnesium ion binding" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000253 InterPro:IPR001766
            InterPro:IPR008984 InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006
            PROSITE:PS50039 SMART:SM00240 SMART:SM00339 GO:GO:0045892
            GO:GO:0045893 GO:GO:0030154 GO:GO:0005730 GO:GO:0030308
            GO:GO:0000287 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0007517 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 EMBL:AC092610 GO:GO:0051090
            eggNOG:COG5025 GO:GO:0009888 EMBL:AK122663 EMBL:AC072054
            EMBL:AC092428 EMBL:BC038434 EMBL:CB959941 EMBL:AW206906
            IPI:IPI00556645 IPI:IPI00807514 RefSeq:NP_001032242.1
            UniGene:Hs.487393 ProteinModelPortal:P85037 SMR:P85037
            IntAct:P85037 STRING:P85037 PhosphoSite:P85037 DMDM:118572324
            PaxDb:P85037 PeptideAtlas:P85037 PRIDE:P85037
            Ensembl:ENST00000328914 Ensembl:ENST00000446823 GeneID:221937
            KEGG:hsa:221937 UCSC:uc003sna.1 UCSC:uc003snc.1 CTD:221937
            GeneCards:GC07P004683 HGNC:HGNC:23480 HPA:HPA017998 HPA:HPA018864
            neXtProt:NX_P85037 PharmGKB:PA134978307 HOGENOM:HOG000072588
            HOVERGEN:HBG051649 InParanoid:P85037 KO:K09404 OMA:CEVGPKE
            ChiTaRS:FOXK1 GenomeRNAi:221937 NextBio:91504 ArrayExpress:P85037
            Bgee:P85037 CleanEx:HS_FOXK1 Genevestigator:P85037 Uniprot:P85037
        Length = 733

 Score = 111 (44.1 bits), Expect = 2.2e-05, P = 2.2e-05
 Identities = 40/120 (33%), Positives = 59/120 (49%)

Query:     9 LFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL---SDMEPV 62
             ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +   S+ + V
Sbjct:   331 IYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLV 390

Query:    63 EDASKSNWVSIKVTGVK--RTGWLAFGYYSER-----PKYDMLNT--SGVLRTCMCNSNE 113
             E A +      +  GV   RT    FG  S R     P +  L +  SG L+T  C S E
Sbjct:   391 EQAFRKR----RQRGVSCFRT---PFGPLSSRSAPASPTHPGLMSPRSGGLQTPECLSRE 443


>WB|WBGene00004013 [details] [associations]
            symbol:pha-4 species:6239 "Caenorhabditis elegans"
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0002119 "nematode larval
            development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0040018 "positive regulation of
            multicellular organism growth" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP] [GO:0008340
            "determination of adult lifespan" evidence=IGI;IMP] [GO:0006629
            "lipid metabolic process" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0060465 "pharynx development" evidence=IGI;IMP]
            [GO:0048598 "embryonic morphogenesis" evidence=IMP] [GO:0000981
            "sequence-specific DNA binding RNA polymerase II transcription
            factor activity" evidence=IMP] [GO:0060573 "cell fate specification
            involved in pattern specification" evidence=IMP] [GO:0030154 "cell
            differentiation" evidence=IMP] [GO:0045727 "positive regulation of
            translation" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0016239 "positive regulation of macroautophagy" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0008340 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
            GO:GO:0019904 GO:GO:0002119 GO:GO:0048598 GO:GO:0043565
            GO:GO:0045944 GO:GO:0006629 GO:GO:0040011 GO:GO:0040018
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0040035 GO:GO:0003690 GO:GO:0008134
            GO:GO:0045727 GO:GO:0060465 GO:GO:0051090 GO:GO:0016239
            eggNOG:COG5025 GO:GO:0009888 EMBL:Z92833 HSSP:Q99958
            GeneTree:ENSGT00690000101636 GO:GO:0060573 EMBL:U51163 PIR:T21941
            RefSeq:NP_001041114.1 RefSeq:NP_001041115.1 RefSeq:NP_001041116.1
            ProteinModelPortal:Q17381 SMR:Q17381 DIP:DIP-27474N IntAct:Q17381
            MINT:MINT-1038224 STRING:Q17381 PaxDb:Q17381
            EnsemblMetazoa:F38A6.1a GeneID:180357 KEGG:cel:CELE_F38A6.1
            UCSC:F38A6.1a CTD:180357 WormBase:F38A6.1a WormBase:F38A6.1b
            WormBase:F38A6.1c HOGENOM:HOG000115523 InParanoid:Q17381
            OMA:PSRKKRN NextBio:909012 Uniprot:Q17381
        Length = 506

 Score = 109 (43.4 bits), Expect = 2.2e-05, P = 2.2e-05
 Identities = 20/45 (44%), Positives = 26/45 (57%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNLSD 58
             FPYY  N  RW+NS+RH+LS N  F K  ++    G G  W L +
Sbjct:   270 FPYYQNNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSFWTLHE 314


>UNIPROTKB|Q17381 [details] [associations]
            symbol:pha-4 "Defective pharyngeal development protein 4"
            species:6239 "Caenorhabditis elegans" [GO:0006366 "transcription
            from RNA polymerase II promoter" evidence=IMP] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0019904 "protein domain specific
            binding" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0008340 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
            GO:GO:0019904 GO:GO:0002119 GO:GO:0048598 GO:GO:0043565
            GO:GO:0045944 GO:GO:0006629 GO:GO:0040011 GO:GO:0040018
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0040035 GO:GO:0003690 GO:GO:0008134
            GO:GO:0045727 GO:GO:0060465 GO:GO:0051090 GO:GO:0016239
            eggNOG:COG5025 GO:GO:0009888 EMBL:Z92833 HSSP:Q99958
            GeneTree:ENSGT00690000101636 GO:GO:0060573 EMBL:U51163 PIR:T21941
            RefSeq:NP_001041114.1 RefSeq:NP_001041115.1 RefSeq:NP_001041116.1
            ProteinModelPortal:Q17381 SMR:Q17381 DIP:DIP-27474N IntAct:Q17381
            MINT:MINT-1038224 STRING:Q17381 PaxDb:Q17381
            EnsemblMetazoa:F38A6.1a GeneID:180357 KEGG:cel:CELE_F38A6.1
            UCSC:F38A6.1a CTD:180357 WormBase:F38A6.1a WormBase:F38A6.1b
            WormBase:F38A6.1c HOGENOM:HOG000115523 InParanoid:Q17381
            OMA:PSRKKRN NextBio:909012 Uniprot:Q17381
        Length = 506

 Score = 109 (43.4 bits), Expect = 2.2e-05, P = 2.2e-05
 Identities = 20/45 (44%), Positives = 26/45 (57%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNLSD 58
             FPYY  N  RW+NS+RH+LS N  F K  ++    G G  W L +
Sbjct:   270 FPYYQNNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSFWTLHE 314


>UNIPROTKB|Q91905 [details] [associations]
            symbol:foxi1-b "Forkhead box protein I1-B" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0007398 "ectoderm
            development" evidence=IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISS] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0048264
            "determination of ventral identity" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0045893 GO:GO:0007399 GO:GO:0030154
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0048264 GO:GO:0007398 HSSP:Q99958
            HOVERGEN:HBG067944 KO:K09401 EMBL:X74316 EMBL:BC078036 PIR:C56556
            PIR:S49009 RefSeq:NP_001081619.1 UniGene:Xl.34912
            ProteinModelPortal:Q91905 SMR:Q91905 GeneID:397955 KEGG:xla:397955
            CTD:397955 Xenbase:XB-GENE-6252155 Uniprot:Q91905
        Length = 367

 Score = 107 (42.7 bits), Expect = 2.2e-05, P = 2.2e-05
 Identities = 22/54 (40%), Positives = 33/54 (61%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL-SDMEPVED 64
             E FP+Y ++   W+NS+RHNLS+N  F+K  +     G G+ W L S+ E + D
Sbjct:   160 ENFPFYKKSKAGWQNSIRHNLSLNDCFKKMPRDENDPGKGNYWTLDSNCEKMFD 213


>ZFIN|ZDB-GENE-980605-6 [details] [associations]
            symbol:foxd2 "forkhead box D2" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-980605-6 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 eggNOG:COG5025
            GeneTree:ENSGT00700000104135 KO:K09397 CTD:2297 HOVERGEN:HBG051641
            OrthoDB:EOG45MN6S HOGENOM:HOG000231285 EMBL:FP016062
            IPI:IPI00998144 RefSeq:NP_571346.2 UniGene:Dr.88583 SMR:B0UXI2
            Ensembl:ENSDART00000138176 GeneID:30525 KEGG:dre:30525 OMA:DNIIGAA
            NextBio:20806909 Uniprot:B0UXI2
        Length = 369

 Score = 107 (42.7 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 23/55 (41%), Positives = 31/55 (56%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNLSDMEPVE 63
             F   RFPYY +    W+NS+RHNLS+N  F K  +   + G G+ W L D E  +
Sbjct:   124 FISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL-DPESAD 177


>UNIPROTKB|I3LJI3 [details] [associations]
            symbol:I3LJI3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GeneTree:ENSGT00700000104051 EMBL:FP680595
            Ensembl:ENSSSCT00000028178 OMA:TINPSFT Uniprot:I3LJI3
        Length = 614

 Score = 110 (43.8 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 25/51 (49%), Positives = 30/51 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA----GHLWNLS 57
             F  E FPY+    D WKNSVRHNLS+N  F K V+   G+    G LW L+
Sbjct:   261 FMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEK-VENKSGSSSRKGCLWALN 310


>UNIPROTKB|Q68EZ2 [details] [associations]
            symbol:foxj2 "Forkhead box protein J2" species:8355
            "Xenopus laevis" [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0045893
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 HSSP:Q99958 CTD:55810 HOVERGEN:HBG051648 KO:K09403
            EMBL:BC080056 RefSeq:NP_001087521.1 UniGene:Xl.48692
            ProteinModelPortal:Q68EZ2 SMR:Q68EZ2 GeneID:447345 KEGG:xla:447345
            Xenbase:XB-GENE-865002 Uniprot:Q68EZ2
        Length = 512

 Score = 109 (43.4 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 24/53 (45%), Positives = 29/53 (54%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNLSDMEPVED 64
             + FPYY      WKNS+RHNLS+N  FRK  +     G G  W + D  P ED
Sbjct:    91 DNFPYYRSAGVGWKNSIRHNLSLNKCFRKVPRPRDDPGKGSYWMI-DSCPKED 142


>UNIPROTKB|Q91904 [details] [associations]
            symbol:foxi1-a "Forkhead box protein I1-A" species:8355
            "Xenopus laevis" [GO:0005634 "nucleus" evidence=IDA] [GO:0007398
            "ectoderm development" evidence=IMP] [GO:0043565 "sequence-specific
            DNA binding" evidence=IDA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0048264
            "determination of ventral identity" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0045893 GO:GO:0007399 GO:GO:0030154
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0048264 GO:GO:0007398 HSSP:Q99958
            HOVERGEN:HBG067944 EMBL:X74315 EMBL:BC080044 PIR:S49008
            RefSeq:NP_001081617.1 UniGene:Xl.5369 ProteinModelPortal:Q91904
            SMR:Q91904 GeneID:397954 KEGG:xla:397954 CTD:397954
            Xenbase:XB-GENE-865722 Uniprot:Q91904
        Length = 370

 Score = 107 (42.7 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 22/54 (40%), Positives = 33/54 (61%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL-SDMEPVED 64
             E FP+Y ++   W+NS+RHNLS+N  F+K  +     G G+ W L S+ E + D
Sbjct:   159 ENFPFYKKSKAGWQNSIRHNLSLNDCFKKMPRDENDPGKGNYWTLDSNCEKMFD 212


>UNIPROTKB|P84961 [details] [associations]
            symbol:foxa2-b "Forkhead box protein A2-B" species:8355
            "Xenopus laevis" [GO:0001707 "mesoderm formation" evidence=ISS]
            [GO:0003677 "DNA binding" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0045893 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0001707
            InterPro:IPR018533 Pfam:PF09354 HOVERGEN:HBG006621
            ProteinModelPortal:P84961 SMR:P84961 Uniprot:P84961
        Length = 433

 Score = 108 (43.1 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FP+Y QN  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   181 FPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTL 223


>UNIPROTKB|Q7T1R4 [details] [associations]
            symbol:foxa2 "Forkhead box protein A2" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0001705 "ectoderm formation"
            evidence=IBA] [GO:0001707 "mesoderm formation" evidence=ISS]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007492 "endoderm development" evidence=IBA]
            [GO:0007596 "blood coagulation" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IBA] [GO:0019904 "protein domain
            specific binding" evidence=IBA] [GO:0021533 "cell differentiation
            in hindbrain" evidence=IBA] [GO:0021779 "oligodendrocyte cell fate
            commitment" evidence=IBA] [GO:0021904 "dorsal/ventral neural tube
            patterning" evidence=IBA] [GO:0031018 "endocrine pancreas
            development" evidence=IBA] [GO:0032289 "central nervous system
            myelin formation" evidence=IBA] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISS] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IBA] [GO:0045666 "positive regulation of
            neuron differentiation" evidence=IBA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0048665 "neuron fate specification" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0060441 "epithelial tube branching
            involved in lung morphogenesis" evidence=IBA] [GO:0060487 "lung
            epithelial cell differentiation" evidence=IBA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0019904 GO:GO:0045893 GO:GO:0009952
            GO:GO:0007596 GO:GO:0043565 GO:GO:0045665 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0001707 GO:GO:0045666 GO:GO:0008134
            GO:GO:0031018 GO:GO:0007492 GO:GO:0060487 GO:GO:0048665
            GO:GO:0051090 GO:GO:0021904 GO:GO:0060441 eggNOG:COG5025
            GeneTree:ENSGT00700000104475 GO:GO:0032289 HSSP:Q99958
            GO:GO:0021533 KO:K08035 InterPro:IPR018533 Pfam:PF09354
            HOGENOM:HOG000231817 HOVERGEN:HBG006621 OrthoDB:EOG466VMM CTD:3170
            GO:GO:0001705 GO:GO:0021779 EMBL:AY260736 EMBL:CR848398
            EMBL:BC088590 RefSeq:NP_989423.1 UniGene:Str.8107
            ProteinModelPortal:Q7T1R4 SMR:Q7T1R4 STRING:Q7T1R4
            Ensembl:ENSXETT00000056642 GeneID:395063 KEGG:xtr:395063
            Xenbase:XB-GENE-480476 InParanoid:Q7T1R4 Bgee:Q7T1R4 Uniprot:Q7T1R4
        Length = 434

 Score = 108 (43.1 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FP+Y QN  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   183 FPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTL 225


>UNIPROTKB|Q91765 [details] [associations]
            symbol:foxa2-a "Forkhead box protein A2-A" species:8355
            "Xenopus laevis" [GO:0001707 "mesoderm formation" evidence=IMP]
            [GO:0005634 "nucleus" evidence=IC;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA]
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0001707 HSSP:Q99958
            KO:K08035 InterPro:IPR018533 Pfam:PF09354 HOVERGEN:HBG006621
            CTD:3170 EMBL:L25637 PIR:I51436 RefSeq:NP_001165629.1
            UniGene:Xl.40286 ProteinModelPortal:Q91765 SMR:Q91765
            GeneID:100127318 KEGG:xla:100127318 Xenbase:XB-GENE-865381
            Uniprot:Q91765
        Length = 434

 Score = 108 (43.1 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FP+Y QN  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   183 FPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTL 225


>RGD|1307421 [details] [associations]
            symbol:Foxi1 "forkhead box I1" species:10116 "Rattus norvegicus"
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009957 "epidermal cell fate specification" evidence=IBA]
            [GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0043049
            "otic placode formation" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA;ISO] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA;ISO]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 RGD:1307421 GO:GO:0043565
            GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0044212 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 EMBL:CH473948 GO:GO:0051090
            GO:GO:0043049 GO:GO:0009957 GeneTree:ENSGT00690000101636 CTD:2299
            KO:K09401 OrthoDB:EOG4XKV7D OMA:FYNTINA IPI:IPI00368760
            RefSeq:NP_001099246.1 UniGene:Rn.32116 Ensembl:ENSRNOT00000009058
            GeneID:287185 KEGG:rno:287185 UCSC:RGD:1307421 NextBio:625680
            Uniprot:D4A7G2
        Length = 372

 Score = 107 (42.7 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 19/45 (42%), Positives = 29/45 (64%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             + FP+YN++   W+NS+RHNLS+N  F+K  +     G G+ W L
Sbjct:   149 DNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTL 193


>UNIPROTKB|D2HNY8 [details] [associations]
            symbol:PANDA_013447 "Putative uncharacterized protein"
            species:9646 "Ailuropoda melanoleuca" [GO:0040019 "positive
            regulation of embryonic development" evidence=ISS] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0090009 "primitive streak formation" evidence=ISS] [GO:2000543
            "positive regulation of gastrulation" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0045893
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0040019 GO:GO:0090009 InterPro:IPR018533 Pfam:PF09354
            HOGENOM:HOG000231817 GO:GO:2000543 EMBL:GL193106 Uniprot:D2HNY8
        Length = 438

 Score = 108 (43.1 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FP+Y QN  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   172 FPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTL 214


>UNIPROTKB|F1MZB6 [details] [associations]
            symbol:FOXA2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:2000976 "regulation of transcription from RNA
            polymerase II promoter involved in detection of glucose"
            evidence=IEA] [GO:2000971 "negative regulation of detection of
            glucose" evidence=IEA] [GO:2000543 "positive regulation of
            gastrulation" evidence=IEA] [GO:0090009 "primitive streak
            formation" evidence=IEA] [GO:0071542 "dopaminergic neuron
            differentiation" evidence=IEA] [GO:0061178 "regulation of insulin
            secretion involved in cellular response to glucose stimulus"
            evidence=IEA] [GO:0060487 "lung epithelial cell differentiation"
            evidence=IEA] [GO:0060441 "epithelial tube branching involved in
            lung morphogenesis" evidence=IEA] [GO:0048665 "neuron fate
            specification" evidence=IEA] [GO:0048468 "cell development"
            evidence=IEA] [GO:0045945 "positive regulation of transcription
            from RNA polymerase III promoter" evidence=IEA] [GO:0045666
            "positive regulation of neuron differentiation" evidence=IEA]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0040019 "positive regulation of embryonic development"
            evidence=IEA] [GO:0033132 "negative regulation of glucokinase
            activity" evidence=IEA] [GO:0032525 "somite rostral/caudal axis
            specification" evidence=IEA] [GO:0031018 "endocrine pancreas
            development" evidence=IEA] [GO:0030193 "regulation of blood
            coagulation" evidence=IEA] [GO:0023019 "signal transduction
            involved in regulation of gene expression" evidence=IEA]
            [GO:0021904 "dorsal/ventral neural tube patterning" evidence=IEA]
            [GO:0021533 "cell differentiation in hindbrain" evidence=IEA]
            [GO:0010719 "negative regulation of epithelial to mesenchymal
            transition" evidence=IEA] [GO:0008344 "adult locomotory behavior"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001705 "ectoderm
            formation" evidence=IEA] [GO:0001701 "in utero embryonic
            development" evidence=IEA] [GO:0000978 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding"
            evidence=IEA] [GO:0000433 "negative regulation of transcription
            from RNA polymerase II promoter by glucose" evidence=IEA]
            [GO:0000432 "positive regulation of transcription from RNA
            polymerase II promoter by glucose" evidence=IEA] [GO:0019904
            "protein domain specific binding" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0071542 GO:GO:0001701
            GO:GO:0008344 GO:GO:0045665 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0003705 GO:GO:0000978 GO:GO:0045666 GO:GO:0043433
            GO:GO:0040019 GO:GO:0031018 GO:GO:0045945 GO:GO:0030193
            GO:GO:0048468 GO:GO:0060487 GO:GO:0048665 GO:GO:0021904
            GO:GO:0060441 GO:GO:0010719 GO:GO:0023019 GO:GO:0090009
            GO:GO:0061178 GeneTree:ENSGT00700000104475 GO:GO:0000433
            GO:GO:0032525 GO:GO:0021533 InterPro:IPR018533 Pfam:PF09354
            OMA:EHKRGGL GO:GO:0001705 GO:GO:2000971 GO:GO:0033132 GO:GO:2000543
            GO:GO:0000432 GO:GO:2000976 EMBL:DAAA02035840 IPI:IPI00688151
            Ensembl:ENSBTAT00000016463 ArrayExpress:F1MZB6 Uniprot:F1MZB6
        Length = 439

 Score = 108 (43.1 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FP+Y QN  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   171 FPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTL 213


>UNIPROTKB|E1BR13 [details] [associations]
            symbol:FOXI1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0044212
            GeneTree:ENSGT00690000101636 CTD:2299 KO:K09401 OMA:QAYGVQR
            EMBL:AADN02035926 IPI:IPI00594856 RefSeq:XP_425185.1
            Ensembl:ENSGALT00000003284 GeneID:427613 KEGG:gga:427613
            NextBio:20828832 Uniprot:E1BR13
        Length = 375

 Score = 107 (42.7 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 19/45 (42%), Positives = 29/45 (64%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             + FP+YN++   W+NS+RHNLS+N  F+K  +     G G+ W L
Sbjct:   155 DNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTL 199


>UNIPROTKB|Q1PA44 [details] [associations]
            symbol:FoxA "Uncharacterized protein" species:7668
            "Strongylocentrotus purpuratus" [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0019904 "protein domain specific
            binding" evidence=IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048513 "organ development" evidence=IBA] [GO:0048665 "neuron
            fate specification" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0019904 GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0009790 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0048665 GO:GO:0051090 GO:GO:0048513 eggNOG:COG5025
            GO:GO:0009888 InterPro:IPR018533 Pfam:PF09354 HOGENOM:HOG000231817
            KO:K09387 EMBL:DQ459376 RefSeq:NP_001073010.1 UniGene:Spu.1709
            ProteinModelPortal:Q1PA44 SMR:Q1PA44 EnsemblMetazoa:SPU_006676tr
            GeneID:578584 KEGG:spu:578584 CTD:30539 OMA:ANSAMIS Uniprot:Q1PA44
        Length = 440

 Score = 108 (43.1 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 21/48 (43%), Positives = 27/48 (56%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  + FP+Y QN  RW+NS+RH+LS N  F K  +     G G  W L
Sbjct:   173 FIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDRPGKGSFWTL 220


>ZFIN|ZDB-GENE-980526-423 [details] [associations]
            symbol:foxa3 "forkhead box A3" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA;IBA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0019904 "protein domain specific
            binding" evidence=IEA;IBA] [GO:0048319 "axial mesoderm
            morphogenesis" evidence=IGI;IMP] [GO:0033504 "floor plate
            development" evidence=IMP] [GO:0048785 "hatching gland development"
            evidence=IMP] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0001678 "cellular glucose homeostasis" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0060441
            "epithelial tube branching involved in lung morphogenesis"
            evidence=IRD] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0008301
            "DNA binding, bending" evidence=IBA] [GO:0070368 "positive
            regulation of hepatocyte differentiation" evidence=IBA] [GO:0008285
            "negative regulation of cell proliferation" evidence=IBA]
            [GO:0060487 "lung epithelial cell differentiation" evidence=IRD]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0048665 "neuron fate
            specification" evidence=IBA] [GO:0009267 "cellular response to
            starvation" evidence=IBA] [GO:0007420 "brain development"
            evidence=IGI] [GO:0021999 "neural plate anterior/posterior
            regionalization" evidence=IGI] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 ZFIN:ZDB-GENE-980526-423 GO:GO:0019904 GO:GO:0008285
            GO:GO:0007420 GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0009267 GO:GO:0008134 GO:GO:0048665
            GO:GO:0051090 GO:GO:0001678 GO:GO:0021999 GO:GO:0033504
            GeneTree:ENSGT00700000104475 GO:GO:0048319 InterPro:IPR018533
            Pfam:PF09354 HOVERGEN:HBG006621 GO:GO:0070368 EMBL:BX908751
            GO:GO:0048785 EMBL:BC162391 IPI:IPI00505867 UniGene:Dr.1307
            SMR:Q1LV18 STRING:Q1LV18 Ensembl:ENSDART00000010813
            InParanoid:Q1LV18 OMA:NLMSNEQ Uniprot:Q1LV18
        Length = 441

 Score = 108 (43.1 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 23/56 (41%), Positives = 31/56 (55%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             LT N    +  + FPYY +N  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   164 LTLNEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWAL 219


>UNIPROTKB|E2RRX4 [details] [associations]
            symbol:FOXI1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0042472 "inner ear morphogenesis" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0044212
            GO:GO:0042472 GeneTree:ENSGT00690000101636 CTD:2299 KO:K09401
            OMA:QAYGVQR EMBL:AAEX03003020 RefSeq:XP_546245.2
            Ensembl:ENSCAFT00000026862 GeneID:489127 KEGG:cfa:489127
            Uniprot:E2RRX4
        Length = 378

 Score = 107 (42.7 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 19/45 (42%), Positives = 29/45 (64%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             + FP+YN++   W+NS+RHNLS+N  F+K  +     G G+ W L
Sbjct:   156 DNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTL 200


>UNIPROTKB|F1RR95 [details] [associations]
            symbol:FOXI1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042472 "inner
            ear morphogenesis" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0044212 GO:GO:0042472 GeneTree:ENSGT00690000101636 CTD:2299
            KO:K09401 OMA:QAYGVQR EMBL:CU694271 RefSeq:XP_003134114.1
            Ensembl:ENSSSCT00000018521 GeneID:100511481 KEGG:ssc:100511481
            Uniprot:F1RR95
        Length = 378

 Score = 107 (42.7 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 19/45 (42%), Positives = 29/45 (64%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             + FP+YN++   W+NS+RHNLS+N  F+K  +     G G+ W L
Sbjct:   156 DNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTL 200


>UNIPROTKB|E1BPY1 [details] [associations]
            symbol:FOXI1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042472 "inner
            ear morphogenesis" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0044212 GO:GO:0042472 GeneTree:ENSGT00690000101636 CTD:2299
            KO:K09401 OMA:QAYGVQR EMBL:DAAA02049848 IPI:IPI00715575
            RefSeq:NP_001179172.1 UniGene:Bt.85445 Ensembl:ENSBTAT00000019467
            GeneID:539442 KEGG:bta:539442 NextBio:20877990 Uniprot:E1BPY1
        Length = 379

 Score = 107 (42.7 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 19/45 (42%), Positives = 29/45 (64%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             + FP+YN++   W+NS+RHNLS+N  F+K  +     G G+ W L
Sbjct:   156 DNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTL 200


>UNIPROTKB|F1NSF2 [details] [associations]
            symbol:FOXK1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0030308 "negative regulation of cell
            growth" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0045892
            GO:GO:0045893 GO:GO:0005730 GO:GO:0030308 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006357
            GO:GO:0006351 GeneTree:ENSGT00700000104094 OMA:CEVGPKE
            EMBL:AADN02023808 IPI:IPI00599164 Ensembl:ENSGALT00000007098
            Uniprot:F1NSF2
        Length = 531

 Score = 109 (43.4 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 23/63 (36%), Positives = 37/63 (58%)

Query:     9 LFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL---SDMEPV 62
             ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +   S+ + V
Sbjct:   149 IYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLV 208

Query:    63 EDA 65
             E A
Sbjct:   209 EQA 211


>ZFIN|ZDB-GENE-031126-4 [details] [associations]
            symbol:foxi3b "forkhead box I3b" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0043049 "otic
            placode formation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0009957 "epidermal cell fate specification"
            evidence=IMP;IDA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 ZFIN:ZDB-GENE-031126-4 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0051090 GO:GO:0043049 GO:GO:0009957 HSSP:Q99958
            HOVERGEN:HBG067944 KO:K09401 EMBL:AY331584 IPI:IPI00500300
            RefSeq:NP_944600.1 UniGene:Dr.89473 ProteinModelPortal:Q7T1C0
            SMR:Q7T1C0 GeneID:387258 KEGG:dre:387258 CTD:387258
            InParanoid:Q7T1C0 NextBio:20814129 Uniprot:Q7T1C0
        Length = 383

 Score = 107 (42.7 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 19/45 (42%), Positives = 29/45 (64%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             + FP+YN++   W+NS+RHNLS+N  F+K  +     G G+ W L
Sbjct:   162 DNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTL 206


>ZFIN|ZDB-GENE-110407-5 [details] [associations]
            symbol:foxf2a "forkhead box F2a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-110407-5 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 OMA:SPYIKQQ EMBL:CU856140
            IPI:IPI00611028 Ensembl:ENSDART00000028159 Bgee:F1QHL6
            Uniprot:F1QHL6
        Length = 383

 Score = 107 (42.7 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNL 56
             F + RFP++  +   WKNSVRHNLS+N  F K  K     G GH W +
Sbjct:    87 FLQARFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTI 134


>UNIPROTKB|F6X786 [details] [associations]
            symbol:FOXN1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00700000104051
            CTD:8456 KO:K09407 OMA:PAPQSKH EMBL:AAEX03006665
            Ensembl:ENSCAFT00000029700 RefSeq:XP_548288.2 GeneID:491168
            KEGG:cfa:491168 Uniprot:F6X786
        Length = 643

 Score = 110 (43.8 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 25/51 (49%), Positives = 30/51 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA----GHLWNLS 57
             F  E FPY+    D WKNSVRHNLS+N  F K V+   G+    G LW L+
Sbjct:   298 FMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEK-VENKSGSSSRKGCLWALN 347


>UNIPROTKB|E1BJ25 [details] [associations]
            symbol:FOXN1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0050673 "epithelial cell proliferation" evidence=IEA]
            [GO:0033081 "regulation of T cell differentiation in thymus"
            evidence=IEA] [GO:0030216 "keratinocyte differentiation"
            evidence=IEA] [GO:0002260 "lymphocyte homeostasis" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0030216 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0033081 GO:GO:0050673
            GeneTree:ENSGT00700000104051 CTD:8456 KO:K09407 OMA:PAPQSKH
            GO:GO:0002260 EMBL:DAAA02048601 EMBL:DAAA02048602 IPI:IPI00714346
            RefSeq:NP_001179381.1 UniGene:Bt.88317 Ensembl:ENSBTAT00000017410
            GeneID:516724 KEGG:bta:516724 NextBio:20872294 Uniprot:E1BJ25
        Length = 644

 Score = 110 (43.8 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 25/51 (49%), Positives = 30/51 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA----GHLWNLS 57
             F  E FPY+    D WKNSVRHNLS+N  F K V+   G+    G LW L+
Sbjct:   298 FMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEK-VENKSGSSSRKGCLWALN 347


>UNIPROTKB|E2R649 [details] [associations]
            symbol:FOXN1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0050673 "epithelial cell proliferation"
            evidence=IEA] [GO:0033081 "regulation of T cell differentiation in
            thymus" evidence=IEA] [GO:0030216 "keratinocyte differentiation"
            evidence=IEA] [GO:0002260 "lymphocyte homeostasis" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0030216 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0033081 GO:GO:0050673
            GO:GO:0002260 ProteinModelPortal:E2R649 Ensembl:ENSCAFT00000029700
            Uniprot:E2R649
        Length = 644

 Score = 110 (43.8 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 25/51 (49%), Positives = 30/51 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA----GHLWNLS 57
             F  E FPY+    D WKNSVRHNLS+N  F K V+   G+    G LW L+
Sbjct:   299 FMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEK-VENKSGSSSRKGCLWALN 348


>UNIPROTKB|O15353 [details] [associations]
            symbol:FOXN1 "Forkhead box protein N1" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0002260 "lymphocyte homeostasis" evidence=IEA] [GO:0033081
            "regulation of T cell differentiation in thymus" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0030216 "keratinocyte differentiation" evidence=IBA]
            [GO:0048538 "thymus development" evidence=IBA] [GO:0050673
            "epithelial cell proliferation" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=TAS] [GO:0005634 "nucleus"
            evidence=TAS] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=TAS] [GO:0006952 "defense
            response" evidence=TAS] [GO:0009887 "organ morphogenesis"
            evidence=TAS] [GO:0008544 "epidermis development" evidence=TAS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            EMBL:Y11741 GO:GO:0030216 GO:GO:0006952 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0009887 GO:GO:0003690
            GO:GO:0048538 GO:GO:0008134 EMBL:CH471159 GO:GO:0050673
            GO:GO:0007389 GO:GO:0051090 eggNOG:COG5025 EMBL:Y11742 EMBL:Y11743
            EMBL:Y11744 EMBL:Y11745 EMBL:Y11746 EMBL:Y11739 EMBL:AK313878
            IPI:IPI00006163 RefSeq:NP_003584.2 UniGene:Hs.663679
            ProteinModelPortal:O15353 SMR:O15353 STRING:O15353
            PhosphoSite:O15353 PRIDE:O15353 DNASU:8456 Ensembl:ENST00000226247
            Ensembl:ENST00000577642 Ensembl:ENST00000579795
            Ensembl:ENST00000584474 GeneID:8456 KEGG:hsa:8456 UCSC:uc002hbj.3
            CTD:8456 GeneCards:GC17P026850 H-InvDB:HIX0039248 HGNC:HGNC:12765
            HPA:HPA041520 MIM:600838 MIM:601705 neXtProt:NX_O15353
            Orphanet:169095 PharmGKB:PA37368 HOGENOM:HOG000059593
            HOVERGEN:HBG051653 InParanoid:O15353 KO:K09407 OMA:PAPQSKH
            OrthoDB:EOG4DZ1TZ PhylomeDB:O15353 GenomeRNAi:8456 NextBio:31648
            Bgee:O15353 CleanEx:HS_FOXN1 Genevestigator:O15353
            GermOnline:ENSG00000109101 Uniprot:O15353
        Length = 648

 Score = 110 (43.8 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 25/51 (49%), Positives = 30/51 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA----GHLWNLS 57
             F  E FPY+    D WKNSVRHNLS+N  F K V+   G+    G LW L+
Sbjct:   300 FMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEK-VENKSGSSSRKGCLWALN 349


>MGI|MGI:102949 [details] [associations]
            symbol:Foxn1 "forkhead box N1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001942 "hair follicle
            development" evidence=IMP] [GO:0002260 "lymphocyte homeostasis"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008283 "cell proliferation" evidence=IDA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0008544 "epidermis development"
            evidence=IMP] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0030216 "keratinocyte differentiation" evidence=ISO;IDA]
            [GO:0033081 "regulation of T cell differentiation in thymus"
            evidence=IMP] [GO:0035878 "nail development" evidence=IMP]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0048538 "thymus development" evidence=ISO;IMP;IBA] [GO:0050673
            "epithelial cell proliferation" evidence=IDA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 MGI:MGI:102949 GO:GO:0030216
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0033081 GO:GO:0048538 GO:GO:0008134
            GO:GO:0050673 GO:GO:0007389 GO:GO:0051090 eggNOG:COG5025
            GeneTree:ENSGT00700000104051 CTD:8456 HOGENOM:HOG000059593
            HOVERGEN:HBG051653 KO:K09407 OMA:PAPQSKH OrthoDB:EOG4DZ1TZ
            EMBL:X81593 IPI:IPI00122489 RefSeq:NP_032264.1 UniGene:Mm.4496
            ProteinModelPortal:Q61575 SMR:Q61575 STRING:Q61575
            PhosphoSite:Q61575 PRIDE:Q61575 Ensembl:ENSMUST00000108294
            GeneID:15218 KEGG:mmu:15218 InParanoid:Q61575 NextBio:287799
            Bgee:Q61575 CleanEx:MM_FOXN1 Genevestigator:Q61575
            GermOnline:ENSMUSG00000002057 GO:GO:0002260 Uniprot:Q61575
        Length = 648

 Score = 110 (43.8 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 25/51 (49%), Positives = 30/51 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA----GHLWNLS 57
             F  E FPY+    D WKNSVRHNLS+N  F K V+   G+    G LW L+
Sbjct:   300 FMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEK-VENKSGSSSRKGCLWALN 349


>RGD|3970 [details] [associations]
            symbol:Foxn1 "forkhead box N1" species:10116 "Rattus norvegicus"
          [GO:0001942 "hair follicle development" evidence=ISO] [GO:0002260
          "lymphocyte homeostasis" evidence=IEA;ISO] [GO:0003690
          "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
          polymerase II distal enhancer sequence-specific DNA binding
          transcription factor activity" evidence=IBA] [GO:0005575
          "cellular_component" evidence=ND] [GO:0005667 "transcription factor
          complex" evidence=IBA] [GO:0007389 "pattern specification process"
          evidence=IBA] [GO:0008134 "transcription factor binding"
          evidence=IBA] [GO:0008283 "cell proliferation" evidence=ISO]
          [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0008544
          "epidermis development" evidence=ISO] [GO:0009790 "embryo
          development" evidence=IBA] [GO:0030216 "keratinocyte differentiation"
          evidence=ISO;IMP] [GO:0033081 "regulation of T cell differentiation
          in thymus" evidence=IEA;ISO] [GO:0035878 "nail development"
          evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
          evidence=IEA] [GO:0048538 "thymus development" evidence=ISO;IMP]
          [GO:0050673 "epithelial cell proliferation" evidence=ISO;IBA]
          [GO:0051090 "regulation of sequence-specific DNA binding
          transcription factor activity" evidence=IBA] InterPro:IPR001766
          InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00658
          PROSITE:PS50039 SMART:SM00339 RGD:3970 GO:GO:0030216 GO:GO:0043565
          Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
          GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0033081 GO:GO:0048538
          GO:GO:0008134 GO:GO:0050673 GO:GO:0007389 EMBL:CH473948 GO:GO:0051090
          GeneTree:ENSGT00700000104051 OMA:PAPQSKH OrthoDB:EOG4DZ1TZ
          GO:GO:0002260 IPI:IPI00763745 UniGene:Rn.217924
          Ensembl:ENSRNOT00000014672 Uniprot:D4A1T1
        Length = 648

 Score = 110 (43.8 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 25/51 (49%), Positives = 30/51 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA----GHLWNLS 57
             F  E FPY+    D WKNSVRHNLS+N  F K V+   G+    G LW L+
Sbjct:   300 FMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEK-VENKSGSSSRKGCLWALN 349


>UNIPROTKB|Q9Y261 [details] [associations]
            symbol:FOXA2 "Hepatocyte nuclear factor 3-beta"
            species:9606 "Homo sapiens" [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
            [GO:0023019 "signal transduction involved in regulation of gene
            expression" evidence=IEA] [GO:0032525 "somite rostral/caudal axis
            specification" evidence=IEA] [GO:0045945 "positive regulation of
            transcription from RNA polymerase III promoter" evidence=IEA]
            [GO:0071542 "dopaminergic neuron differentiation" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001701 "in utero
            embryonic development" evidence=IBA] [GO:0001705 "ectoderm
            formation" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007492 "endoderm development" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IBA]
            [GO:0019904 "protein domain specific binding" evidence=IBA]
            [GO:0021533 "cell differentiation in hindbrain" evidence=IBA]
            [GO:0021779 "oligodendrocyte cell fate commitment" evidence=IBA]
            [GO:0021904 "dorsal/ventral neural tube patterning" evidence=IBA]
            [GO:0031018 "endocrine pancreas development" evidence=IDA;IBA]
            [GO:0032289 "central nervous system myelin formation" evidence=IBA]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=IBA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IBA] [GO:0048665 "neuron fate
            specification" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0060441 "epithelial tube branching involved in
            lung morphogenesis" evidence=IBA] [GO:0060487 "lung epithelial cell
            differentiation" evidence=IBA] [GO:0030193 "regulation of blood
            coagulation" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISS;IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0044212 "transcription regulatory
            region DNA binding" evidence=IMP] [GO:0070741 "response to
            interleukin-6" evidence=TAS] [GO:0040019 "positive regulation of
            embryonic development" evidence=ISS] [GO:0090009 "primitive streak
            formation" evidence=ISS] [GO:2000543 "positive regulation of
            gastrulation" evidence=ISS] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0000978 "RNA polymerase
            II core promoter proximal region sequence-specific DNA binding"
            evidence=IDA] [GO:0043433 "negative regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IMP]
            [GO:0061178 "regulation of insulin secretion involved in cellular
            response to glucose stimulus" evidence=ISS] [GO:0033132 "negative
            regulation of glucokinase activity" evidence=ISS] [GO:0000433
            "negative regulation of transcription from RNA polymerase II
            promoter by glucose" evidence=ISS] [GO:0000432 "positive regulation
            of transcription from RNA polymerase II promoter by glucose"
            evidence=ISS] [GO:0010719 "negative regulation of epithelial to
            mesenchymal transition" evidence=IMP] [GO:2000049 "positive
            regulation of cell-cell adhesion mediated by cadherin" evidence=IC]
            [GO:2000976 "regulation of transcription from RNA polymerase II
            promoter involved in detection of glucose" evidence=ISS]
            [GO:2000971 "negative regulation of detection of glucose"
            evidence=ISS] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005737 GO:GO:0019904 GO:GO:0071542 GO:GO:0001701
            Pathway_Interaction_DB:hnf3apathway GO:GO:2000049 GO:GO:0008344
            GO:GO:0045665 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016568
            Pathway_Interaction_DB:hnf3bpathway GO:GO:0032868 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000978 GO:GO:0008301 GO:GO:0003690
            GO:GO:0045666 GO:GO:0043433 GO:GO:0040019 GO:GO:0008134
            Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0031018
            GO:GO:0070741 GO:GO:0045945 GO:GO:0007492 GO:GO:0030193
            GO:GO:0060487 GO:GO:0048665 GO:GO:0021904 GO:GO:0060441
            GO:GO:0010719 GO:GO:0023019 GO:GO:0090009 GO:GO:0061178
            eggNOG:COG5025 GO:GO:0000433 GO:GO:0032525 GO:GO:0032289
            GO:GO:0021533 KO:K08035 InterPro:IPR018533 Pfam:PF09354
            HOGENOM:HOG000231817 HOVERGEN:HBG006621
            Pathway_Interaction_DB:hnf3pathway EMBL:AB028021 EMBL:AF147787
            EMBL:AF176110 EMBL:AL121722 EMBL:BC006545 EMBL:BC011780
            EMBL:BC019288 IPI:IPI00031773 IPI:IPI00908346 RefSeq:NP_068556.2
            RefSeq:NP_710141.1 UniGene:Hs.155651 ProteinModelPortal:Q9Y261
            SMR:Q9Y261 MINT:MINT-6610868 STRING:Q9Y261 PhosphoSite:Q9Y261
            DMDM:8134491 PaxDb:Q9Y261 PRIDE:Q9Y261 DNASU:3170
            Ensembl:ENST00000319993 Ensembl:ENST00000377115
            Ensembl:ENST00000419308 GeneID:3170 KEGG:hsa:3170 UCSC:uc002wsn.3
            CTD:3170 GeneCards:GC20M022561 HGNC:HGNC:5022 HPA:CAB001388
            MIM:600288 neXtProt:NX_Q9Y261 PharmGKB:PA201091 InParanoid:Q9Y261
            OMA:EHKRGGL OrthoDB:EOG4QRH5P PhylomeDB:Q9Y261 ChiTaRS:FOXA2
            GenomeRNAi:3170 NextBio:12568 ArrayExpress:Q9Y261 Bgee:Q9Y261
            CleanEx:HS_FOXA2 Genevestigator:Q9Y261 GermOnline:ENSG00000125798
            GO:GO:0001705 GO:GO:2000971 GO:GO:0033132 GO:GO:0021779
            GO:GO:2000543 GO:GO:0000432 GO:GO:2000976 Uniprot:Q9Y261
        Length = 457

 Score = 108 (43.1 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FP+Y QN  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   193 FPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTL 235


>UNIPROTKB|F1SAU0 [details] [associations]
            symbol:FOXA2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2000976 "regulation of transcription from RNA
            polymerase II promoter involved in detection of glucose"
            evidence=IEA] [GO:2000971 "negative regulation of detection of
            glucose" evidence=IEA] [GO:2000543 "positive regulation of
            gastrulation" evidence=IEA] [GO:0090009 "primitive streak
            formation" evidence=IEA] [GO:0071542 "dopaminergic neuron
            differentiation" evidence=IEA] [GO:0061178 "regulation of insulin
            secretion involved in cellular response to glucose stimulus"
            evidence=IEA] [GO:0060487 "lung epithelial cell differentiation"
            evidence=IEA] [GO:0060441 "epithelial tube branching involved in
            lung morphogenesis" evidence=IEA] [GO:0048665 "neuron fate
            specification" evidence=IEA] [GO:0048468 "cell development"
            evidence=IEA] [GO:0045945 "positive regulation of transcription
            from RNA polymerase III promoter" evidence=IEA] [GO:0045666
            "positive regulation of neuron differentiation" evidence=IEA]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0040019 "positive regulation of embryonic development"
            evidence=IEA] [GO:0033132 "negative regulation of glucokinase
            activity" evidence=IEA] [GO:0032525 "somite rostral/caudal axis
            specification" evidence=IEA] [GO:0031018 "endocrine pancreas
            development" evidence=IEA] [GO:0030193 "regulation of blood
            coagulation" evidence=IEA] [GO:0023019 "signal transduction
            involved in regulation of gene expression" evidence=IEA]
            [GO:0021904 "dorsal/ventral neural tube patterning" evidence=IEA]
            [GO:0021533 "cell differentiation in hindbrain" evidence=IEA]
            [GO:0010719 "negative regulation of epithelial to mesenchymal
            transition" evidence=IEA] [GO:0008344 "adult locomotory behavior"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001705 "ectoderm
            formation" evidence=IEA] [GO:0001701 "in utero embryonic
            development" evidence=IEA] [GO:0000978 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding"
            evidence=IEA] [GO:0000433 "negative regulation of transcription
            from RNA polymerase II promoter by glucose" evidence=IEA]
            [GO:0000432 "positive regulation of transcription from RNA
            polymerase II promoter by glucose" evidence=IEA] [GO:0019904
            "protein domain specific binding" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0071542 GO:GO:0001701
            GO:GO:0008344 GO:GO:0045665 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0003705 GO:GO:0000978 GO:GO:0045666 GO:GO:0043433
            GO:GO:0040019 GO:GO:0031018 GO:GO:0045945 GO:GO:0030193
            GO:GO:0048468 GO:GO:0060487 GO:GO:0048665 GO:GO:0021904
            GO:GO:0060441 GO:GO:0010719 GO:GO:0023019 GO:GO:0090009
            GO:GO:0061178 GeneTree:ENSGT00700000104475 GO:GO:0000433
            GO:GO:0032525 GO:GO:0021533 InterPro:IPR018533 Pfam:PF09354
            OMA:EHKRGGL GO:GO:0001705 GO:GO:2000971 GO:GO:0033132 GO:GO:2000543
            GO:GO:0000432 GO:GO:2000976 EMBL:CU633667
            Ensembl:ENSSSCT00000007786 Uniprot:F1SAU0
        Length = 457

 Score = 108 (43.1 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FP+Y QN  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   193 FPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTL 235


>MGI|MGI:1347476 [details] [associations]
            symbol:Foxa2 "forkhead box A2" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0000432 "positive
            regulation of transcription from RNA polymerase II promoter by
            glucose" evidence=IDA] [GO:0000433 "negative regulation of
            transcription from RNA polymerase II promoter by glucose"
            evidence=IDA] [GO:0000978 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding" evidence=ISO] [GO:0001077
            "RNA polymerase II core promoter proximal region sequence-specific
            DNA binding transcription factor activity involved in positive
            regulation of transcription" evidence=ISO] [GO:0001701 "in utero
            embryonic development" evidence=IMP] [GO:0001705 "ectoderm
            formation" evidence=IGI] [GO:0001708 "cell fate specification"
            evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO;IDA]
            [GO:0003690 "double-stranded DNA binding" evidence=ISO;IBA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
            factor complex" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISO;IDA] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0007389 "pattern
            specification process" evidence=IGI] [GO:0007492 "endoderm
            development" evidence=IBA] [GO:0007596 "blood coagulation"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0009653
            "anatomical structure morphogenesis" evidence=IGI] [GO:0009952
            "anterior/posterior pattern specification" evidence=IGI]
            [GO:0009953 "dorsal/ventral pattern formation" evidence=IGI]
            [GO:0010468 "regulation of gene expression" evidence=IGI]
            [GO:0010719 "negative regulation of epithelial to mesenchymal
            transition" evidence=ISO] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0019900 "kinase binding" evidence=ISO]
            [GO:0019904 "protein domain specific binding" evidence=IBA]
            [GO:0021533 "cell differentiation in hindbrain" evidence=IGI;IMP]
            [GO:0021779 "oligodendrocyte cell fate commitment" evidence=IBA]
            [GO:0021904 "dorsal/ventral neural tube patterning"
            evidence=IGI;IDA] [GO:0023019 "signal transduction involved in
            regulation of gene expression" evidence=IDA] [GO:0030193
            "regulation of blood coagulation" evidence=ISO] [GO:0030324 "lung
            development" evidence=IGI] [GO:0031018 "endocrine pancreas
            development" evidence=ISO;IMP] [GO:0032289 "central nervous system
            myelin formation" evidence=IBA] [GO:0032525 "somite rostral/caudal
            axis specification" evidence=IMP] [GO:0033132 "negative regulation
            of glucokinase activity" evidence=IDA] [GO:0040019 "positive
            regulation of embryonic development" evidence=IMP] [GO:0043433
            "negative regulation of sequence-specific DNA binding transcription
            factor activity" evidence=ISO] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISO;IDA] [GO:0044212 "transcription regulatory
            region DNA binding" evidence=ISO] [GO:0044464 "cell part"
            evidence=IDA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IGI] [GO:0045666 "positive regulation of
            neuron differentiation" evidence=IGI;IMP] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISO;IMP]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;IGI;IDA;IMP] [GO:0045945
            "positive regulation of transcription from RNA polymerase III
            promoter" evidence=IMP] [GO:0046332 "SMAD binding" evidence=ISO]
            [GO:0048468 "cell development" evidence=IMP] [GO:0048646
            "anatomical structure formation involved in morphogenesis"
            evidence=IGI] [GO:0048665 "neuron fate specification"
            evidence=IGI;IMP] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0060441
            "epithelial tube branching involved in lung morphogenesis"
            evidence=IGI] [GO:0060487 "lung epithelial cell differentiation"
            evidence=IGI] [GO:0061178 "regulation of insulin secretion involved
            in cellular response to glucose stimulus" evidence=IDA] [GO:0070741
            "response to interleukin-6" evidence=TAS] [GO:0071542 "dopaminergic
            neuron differentiation" evidence=IMP] [GO:0090009 "primitive streak
            formation" evidence=IMP] [GO:2000543 "positive regulation of
            gastrulation" evidence=IMP] [GO:2000971 "negative regulation of
            detection of glucose" evidence=IDA] [GO:2000976 "regulation of
            transcription from RNA polymerase II promoter involved in detection
            of glucose" evidence=IDA] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            MGI:MGI:1347476 GO:GO:0005737 GO:GO:0019904 GO:GO:0007596
            GO:GO:0071542 GO:GO:0043565 GO:GO:0001701 GO:GO:0008344
            GO:GO:0045665 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016568
            GO:GO:0032868 GO:GO:0005667 GO:GO:0003705 GO:GO:0000978
            GO:GO:0008301 GO:GO:0003690 GO:GO:0045666 GO:GO:0043433
            GO:GO:0040019 GO:GO:0008134 GO:GO:0031018 GO:GO:0070741
            GO:GO:0045945 GO:GO:0007492 GO:GO:0030193 GO:GO:0060487
            GO:GO:0048665 GO:GO:0051090 GO:GO:0021904 GO:GO:0060441
            GO:GO:0010719 GO:GO:0023019 GO:GO:0090009 GO:GO:0061178
            eggNOG:COG5025 GeneTree:ENSGT00700000104475 GO:GO:0000433
            GO:GO:0032525 GO:GO:0032289 GO:GO:0021533 KO:K08035
            InterPro:IPR018533 Pfam:PF09354 HOGENOM:HOG000231817
            HOVERGEN:HBG006621 CTD:3170 OrthoDB:EOG4QRH5P GO:GO:0001705
            GO:GO:2000971 GO:GO:0033132 GO:GO:0021779 GO:GO:2000543
            GO:GO:0000432 GO:GO:2000976 EMBL:X74937 EMBL:L10409 EMBL:AL845297
            EMBL:U04197 IPI:IPI00119671 PIR:B54258 RefSeq:NP_034576.2
            UniGene:Mm.938 ProteinModelPortal:P35583 SMR:P35583 IntAct:P35583
            STRING:P35583 PhosphoSite:P35583 PRIDE:P35583 DNASU:15376
            Ensembl:ENSMUST00000047315 GeneID:15376 KEGG:mmu:15376
            InParanoid:A2AR89 NextBio:288030 Bgee:P35583 CleanEx:MM_FOXA2
            Genevestigator:P35583 GermOnline:ENSMUSG00000037025 Uniprot:P35583
        Length = 459

 Score = 108 (43.1 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FP+Y QN  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   193 FPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTL 235


>UNIPROTKB|Q12948 [details] [associations]
            symbol:FOXC1 "Forkhead box protein C1" species:9606 "Homo
            sapiens" [GO:0001501 "skeletal system development" evidence=IEA]
            [GO:0001701 "in utero embryonic development" evidence=IEA]
            [GO:0014032 "neural crest cell development" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
            tooth" evidence=IMP] [GO:0001503 "ossification" evidence=IBA]
            [GO:0001541 "ovarian follicle development" evidence=IBA]
            [GO:0001570 "vasculogenesis" evidence=IBA] [GO:0001656 "metanephros
            development" evidence=IBA] [GO:0001657 "ureteric bud development"
            evidence=IBA] [GO:0001756 "somitogenesis" evidence=IBA] [GO:0001946
            "lymphangiogenesis" evidence=IBA] [GO:0001974 "blood vessel
            remodeling" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007219 "Notch signaling pathway" evidence=IBA]
            [GO:0007420 "brain development" evidence=IBA] [GO:0008354 "germ
            cell migration" evidence=IBA] [GO:0014034 "neural crest cell fate
            commitment" evidence=IBA] [GO:0030199 "collagen fibril
            organization" evidence=IBA] [GO:0030203 "glycosaminoglycan
            metabolic process" evidence=IBA] [GO:0031490 "chromatin DNA
            binding" evidence=IBA] [GO:0032808 "lacrimal gland development"
            evidence=IBA] [GO:0035050 "embryonic heart tube development"
            evidence=IBA] [GO:0043010 "camera-type eye development"
            evidence=IBA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISS;IDA;IBA] [GO:0046620
            "regulation of organ growth" evidence=IBA] [GO:0048010 "vascular
            endothelial growth factor receptor signaling pathway" evidence=IBA]
            [GO:0048343 "paraxial mesodermal cell fate commitment"
            evidence=IBA] [GO:0048844 "artery morphogenesis" evidence=IBA]
            [GO:0050880 "regulation of blood vessel size" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0055010
            "ventricular cardiac muscle tissue morphogenesis" evidence=IBA]
            [GO:0060038 "cardiac muscle cell proliferation" evidence=IBA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0045930 "negative regulation of mitotic
            cell cycle" evidence=IDA] [GO:0005634 "nucleus" evidence=IC;IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA;NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IDA] [GO:0008134 "transcription factor binding"
            evidence=IPI] [GO:0008301 "DNA binding, bending" evidence=IDA]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0005720 "nuclear
            heterochromatin" evidence=IDA] [GO:0001654 "eye development"
            evidence=IDA] [GO:0007507 "heart development" evidence=IDA]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005737 GO:GO:0007420
            GO:GO:0043565 GO:GO:0001701 GO:GO:0005720 GO:GO:0030199
            GO:GO:0045944 GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0001756
            GO:GO:0043010 GO:GO:0044212 GO:GO:0001501 GO:GO:0001974
            GO:GO:0003690 GO:GO:0001541 GO:GO:0001946 GO:GO:0001570
            GO:GO:0042475 GO:GO:0014032 GO:GO:0050880 GO:GO:0001503
            GO:GO:0048844 GO:GO:0031490 GO:GO:0001656 GO:GO:0001657
            GO:GO:0051090 GO:GO:0046620 GO:GO:0048010 GO:GO:0045930
            GO:GO:0060038 GO:GO:0055010 GO:GO:0030203 MIM:604229 Orphanet:708
            eggNOG:COG5025 KO:K09396 GO:GO:0035050 GO:GO:0008354 GO:GO:0032808
            EMBL:AF048693 EMBL:AF078096 EMBL:AY228704 EMBL:AL034344 EMBL:L12143
            EMBL:U13221 IPI:IPI00290377 PIR:S51626 RefSeq:NP_001444.2
            UniGene:Hs.348883 ProteinModelPortal:Q12948 SMR:Q12948
            IntAct:Q12948 STRING:Q12948 PhosphoSite:Q12948 DMDM:13638267
            PaxDb:Q12948 PRIDE:Q12948 Ensembl:ENST00000380874 GeneID:2296
            KEGG:hsa:2296 UCSC:uc003mtp.3 CTD:2296 GeneCards:GC06P001610
            H-InvDB:HIX0032962 HGNC:HGNC:3800 HPA:HPA040670 MIM:601090
            MIM:601631 MIM:602482 neXtProt:NX_Q12948 Orphanet:98978
            Orphanet:782 Orphanet:91483 PharmGKB:PA28217 HOVERGEN:HBG051640
            InParanoid:Q12948 OMA:QRIGLNN OrthoDB:EOG479F8T PhylomeDB:Q12948
            GenomeRNAi:2296 NextBio:9319 ArrayExpress:Q12948 Bgee:Q12948
            CleanEx:HS_FOXC1 Genevestigator:Q12948 GermOnline:ENSG00000054598
            GO:GO:0014034 GO:GO:0048343 Uniprot:Q12948
        Length = 553

 Score = 109 (43.4 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 23/56 (41%), Positives = 31/56 (55%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             +T N    F  +RFP+Y  N   W+NS+RHNLS+N  F K  +  +  G G  W L
Sbjct:    99 ITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 154


>MGI|MGI:1347466 [details] [associations]
            symbol:Foxc1 "forkhead box C1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001501 "skeletal system
            development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
            [GO:0001541 "ovarian follicle development" evidence=IMP]
            [GO:0001568 "blood vessel development" evidence=IGI] [GO:0001570
            "vasculogenesis" evidence=IBA] [GO:0001654 "eye development"
            evidence=ISO;IMP] [GO:0001656 "metanephros development"
            evidence=IBA] [GO:0001657 "ureteric bud development" evidence=IMP]
            [GO:0001701 "in utero embryonic development" evidence=IMP]
            [GO:0001756 "somitogenesis" evidence=IGI] [GO:0001822 "kidney
            development" evidence=IMP] [GO:0001945 "lymph vessel development"
            evidence=IGI] [GO:0001946 "lymphangiogenesis" evidence=IBA]
            [GO:0001974 "blood vessel remodeling" evidence=IGI] [GO:0003007
            "heart morphogenesis" evidence=IGI] [GO:0003677 "DNA binding"
            evidence=ISO] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO;IDA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0005720 "nuclear heterochromatin" evidence=ISO]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IGI]
            [GO:0007420 "brain development" evidence=IMP] [GO:0007507 "heart
            development" evidence=IGI;ISO;IMP] [GO:0008134 "transcription
            factor binding" evidence=ISO;IBA] [GO:0008301 "DNA binding,
            bending" evidence=ISO;IBA] [GO:0008354 "germ cell migration"
            evidence=IMP] [GO:0014032 "neural crest cell development"
            evidence=IGI] [GO:0014034 "neural crest cell fate commitment"
            evidence=IBA] [GO:0030199 "collagen fibril organization"
            evidence=IMP] [GO:0030203 "glycosaminoglycan metabolic process"
            evidence=IMP] [GO:0031490 "chromatin DNA binding" evidence=IBA]
            [GO:0032808 "lacrimal gland development" evidence=IMP] [GO:0035050
            "embryonic heart tube development" evidence=IGI] [GO:0042475
            "odontogenesis of dentin-containing tooth" evidence=ISO;IBA]
            [GO:0043010 "camera-type eye development" evidence=IMP] [GO:0043066
            "negative regulation of apoptotic process" evidence=IGI]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISO]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=IDA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0045930 "negative regulation of
            mitotic cell cycle" evidence=ISO;IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO;IDA] [GO:0046620 "regulation of organ growth"
            evidence=IGI] [GO:0048010 "vascular endothelial growth factor
            receptor signaling pathway" evidence=IGI] [GO:0048341 "paraxial
            mesoderm formation" evidence=IGI] [GO:0048343 "paraxial mesodermal
            cell fate commitment" evidence=IBA] [GO:0048762 "mesenchymal cell
            differentiation" evidence=IMP] [GO:0048844 "artery morphogenesis"
            evidence=IMP] [GO:0050880 "regulation of blood vessel size"
            evidence=IGI] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0055010
            "ventricular cardiac muscle tissue morphogenesis" evidence=IGI]
            [GO:0060038 "cardiac muscle cell proliferation" evidence=IGI]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            MGI:MGI:1347466 GO:GO:0005737 GO:GO:0043066 GO:GO:0007420
            GO:GO:0043565 GO:GO:0001701 GO:GO:0005720 GO:GO:0030199
            GO:GO:0045944 GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0000122 GO:GO:0008301
            GO:GO:0001756 GO:GO:0043010 GO:GO:0044212 GO:GO:0001501
            GO:GO:0001974 GO:GO:0003690 GO:GO:0001541 GO:GO:0001946
            GO:GO:0001570 GO:GO:0042475 GO:GO:0008134 GO:GO:0014032
            GO:GO:0050880 GO:GO:0001503 GO:GO:0048844 GO:GO:0031490
            GO:GO:0001656 GO:GO:0001657 GO:GO:0051090 GO:GO:0046620
            GO:GO:0048010 GO:GO:0045930 GO:GO:0060038 GO:GO:0055010
            GO:GO:0030203 eggNOG:COG5025 KO:K09396 GO:GO:0035050 GO:GO:0008354
            GeneTree:ENSGT00690000101636 GO:GO:0032808 CTD:2296
            HOVERGEN:HBG051640 OMA:QRIGLNN GO:GO:0014034 GO:GO:0048343
            EMBL:AF045017 EMBL:AJ223298 EMBL:AK144420 EMBL:BC052011 EMBL:X71939
            EMBL:L10406 IPI:IPI00122483 PIR:I49674 RefSeq:NP_032618.2
            UniGene:Mm.12949 ProteinModelPortal:Q61572 SMR:Q61572 IntAct:Q61572
            STRING:Q61572 PhosphoSite:Q61572 PRIDE:Q61572
            Ensembl:ENSMUST00000062292 GeneID:17300 KEGG:mmu:17300
            HOGENOM:HOG000007939 InParanoid:Q9QWR9 NextBio:291834 Bgee:Q61572
            CleanEx:MM_FOXC1 Genevestigator:Q61572
            GermOnline:ENSMUSG00000050295 Uniprot:Q61572
        Length = 553

 Score = 109 (43.4 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 23/56 (41%), Positives = 31/56 (55%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             +T N    F  +RFP+Y  N   W+NS+RHNLS+N  F K  +  +  G G  W L
Sbjct:    99 ITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 154


>UNIPROTKB|Q4H3I5 [details] [associations]
            symbol:Ci-FoxI-b "Transcription factor protein"
            species:7719 "Ciona intestinalis" [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009653 "anatomical structure morphogenesis" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0048513 "organ development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0008134 GO:GO:0009653 GO:GO:0007389 GO:GO:0051090
            GO:GO:0048513 eggNOG:COG5025 GO:GO:0009888 KO:K09401
            HOGENOM:HOG000169943 HOVERGEN:HBG086629 EMBL:AB210437
            RefSeq:NP_001071712.1 UniGene:Cin.27236 ProteinModelPortal:Q4H3I5
            SMR:Q4H3I5 GeneID:778615 KEGG:cin:778615 CTD:778615
            InParanoid:Q4H3I5 Uniprot:Q4H3I5
        Length = 466

 Score = 108 (43.1 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 21/56 (37%), Positives = 33/56 (58%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             LT +    +  E FP+Y ++   W+NS+RHNLS+N  F+K  +     G G+ W+L
Sbjct:   164 LTLSSIYLYVAENFPFYKRSRAGWQNSIRHNLSLNDCFKKVARDEDDPGKGNYWSL 219


>UNIPROTKB|E2RNQ6 [details] [associations]
            symbol:FOXA2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:2000543 "positive regulation of gastrulation"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0090009 "primitive streak
            formation" evidence=ISS] [GO:0040019 "positive regulation of
            embryonic development" evidence=ISS] [GO:2000976 "regulation of
            transcription from RNA polymerase II promoter involved in detection
            of glucose" evidence=IEA] [GO:2000971 "negative regulation of
            detection of glucose" evidence=IEA] [GO:0071542 "dopaminergic
            neuron differentiation" evidence=IEA] [GO:0061178 "regulation of
            insulin secretion involved in cellular response to glucose
            stimulus" evidence=IEA] [GO:0060487 "lung epithelial cell
            differentiation" evidence=IEA] [GO:0060441 "epithelial tube
            branching involved in lung morphogenesis" evidence=IEA] [GO:0048665
            "neuron fate specification" evidence=IEA] [GO:0048468 "cell
            development" evidence=IEA] [GO:0045945 "positive regulation of
            transcription from RNA polymerase III promoter" evidence=IEA]
            [GO:0045666 "positive regulation of neuron differentiation"
            evidence=IEA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IEA] [GO:0043433 "negative regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0033132 "negative regulation of glucokinase
            activity" evidence=IEA] [GO:0032525 "somite rostral/caudal axis
            specification" evidence=IEA] [GO:0031018 "endocrine pancreas
            development" evidence=IEA] [GO:0030193 "regulation of blood
            coagulation" evidence=IEA] [GO:0023019 "signal transduction
            involved in regulation of gene expression" evidence=IEA]
            [GO:0021904 "dorsal/ventral neural tube patterning" evidence=IEA]
            [GO:0021533 "cell differentiation in hindbrain" evidence=IEA]
            [GO:0010719 "negative regulation of epithelial to mesenchymal
            transition" evidence=IEA] [GO:0008344 "adult locomotory behavior"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001705 "ectoderm
            formation" evidence=IEA] [GO:0001701 "in utero embryonic
            development" evidence=IEA] [GO:0000978 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding"
            evidence=IEA] [GO:0000433 "negative regulation of transcription
            from RNA polymerase II promoter by glucose" evidence=IEA]
            [GO:0000432 "positive regulation of transcription from RNA
            polymerase II promoter by glucose" evidence=IEA] [GO:0019904
            "protein domain specific binding" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045893 GO:GO:0071542
            GO:GO:0001701 GO:GO:0008344 GO:GO:0045665 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0003705 GO:GO:0000978 GO:GO:0045666
            GO:GO:0043433 GO:GO:0040019 GO:GO:0031018 GO:GO:0045945
            GO:GO:0030193 GO:GO:0048468 GO:GO:0060487 GO:GO:0048665
            GO:GO:0021904 GO:GO:0060441 GO:GO:0010719 GO:GO:0023019
            GO:GO:0090009 GO:GO:0061178 GeneTree:ENSGT00700000104475
            GO:GO:0000433 GO:GO:0032525 GO:GO:0021533 KO:K08035
            InterPro:IPR018533 Pfam:PF09354 CTD:3170 OMA:EHKRGGL GO:GO:0001705
            GO:GO:2000971 GO:GO:0033132 GO:GO:2000543 GO:GO:0000432
            GO:GO:2000976 EMBL:AAEX03013741 RefSeq:XP_542865.2
            Ensembl:ENSCAFT00000008326 GeneID:485742 KEGG:cfa:485742
            Uniprot:E2RNQ6
        Length = 468

 Score = 108 (43.1 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query:    16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             FP+Y QN  RW+NS+RH+LS N  F K  ++    G G  W L
Sbjct:   199 FPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTL 241


>WB|WBGene00003976 [details] [associations]
            symbol:pes-1 species:6239 "Caenorhabditis elegans"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0009792 "embryo development ending in
            birth or egg hatching" evidence=IGI;IMP] [GO:0002119 "nematode
            larval development" evidence=IGI] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0009792 GO:GO:0007346
            GO:GO:0002119 GO:GO:0043565 GO:GO:0045944 GO:GO:0016199
            GO:GO:0016358 GO:GO:0045665 GO:GO:0040017 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0009953 GO:GO:0008134 GO:GO:0009880
            GO:GO:0048665 GO:GO:0045787 GO:GO:0002052 GO:GO:0051090
            GO:GO:0035058 GO:GO:0009888 HSSP:Q99958
            GeneTree:ENSGT00700000104094 EMBL:FO080454 EMBL:Z28375 EMBL:Z28377
            PIR:S42793 RefSeq:NP_001023406.1 UniGene:Cel.12538
            ProteinModelPortal:G5EGC9 SMR:G5EGC9 EnsemblMetazoa:T28H11.4
            GeneID:177267 KEGG:cel:CELE_T28H11.4 CTD:177267 WormBase:T28H11.4
            OMA:FHTRSES NextBio:896046 Uniprot:G5EGC9
        Length = 264

 Score = 104 (41.7 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 21/43 (48%), Positives = 28/43 (65%)

Query:    16 FPYY-NQNDDRWKNSVRHNLSINPHFRKGVKASQGAGHLWNLS 57
             F YY NQ   +W+NSVRHNLS++  FRK V+   G G  W ++
Sbjct:   127 FSYYKNQKPLQWQNSVRHNLSLHKEFRK-VRTLDGKGSYWAMT 168


>UNIPROTKB|G5EGC9 [details] [associations]
            symbol:pes-1 "Protein PES-1" species:6239 "Caenorhabditis
            elegans" [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0048665 "neuron
            fate specification" evidence=IBA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0045787 "positive regulation of cell cycle" evidence=IBA]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=IBA] [GO:0040017 "positive regulation of locomotion"
            evidence=IBA] [GO:0035058 "nonmotile primary cilium assembly"
            evidence=IBA] [GO:0016358 "dendrite development" evidence=IBA]
            [GO:0016199 "axon midline choice point recognition" evidence=IBA]
            [GO:0009953 "dorsal/ventral pattern formation" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0009880
            "embryonic pattern specification" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0007346 "regulation of mitotic cell
            cycle" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0002052 "positive regulation of neuroblast
            proliferation" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0009792 GO:GO:0007346 GO:GO:0002119
            GO:GO:0043565 GO:GO:0045944 GO:GO:0016199 GO:GO:0016358
            GO:GO:0045665 GO:GO:0040017 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0003690
            GO:GO:0009953 GO:GO:0008134 GO:GO:0009880 GO:GO:0048665
            GO:GO:0045787 GO:GO:0002052 GO:GO:0051090 GO:GO:0035058
            GO:GO:0009888 HSSP:Q99958 GeneTree:ENSGT00700000104094
            EMBL:FO080454 EMBL:Z28375 EMBL:Z28377 PIR:S42793
            RefSeq:NP_001023406.1 UniGene:Cel.12538 ProteinModelPortal:G5EGC9
            SMR:G5EGC9 EnsemblMetazoa:T28H11.4 GeneID:177267
            KEGG:cel:CELE_T28H11.4 CTD:177267 WormBase:T28H11.4 OMA:FHTRSES
            NextBio:896046 Uniprot:G5EGC9
        Length = 264

 Score = 104 (41.7 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 21/43 (48%), Positives = 28/43 (65%)

Query:    16 FPYY-NQNDDRWKNSVRHNLSINPHFRKGVKASQGAGHLWNLS 57
             F YY NQ   +W+NSVRHNLS++  FRK V+   G G  W ++
Sbjct:   127 FSYYKNQKPLQWQNSVRHNLSLHKEFRK-VRTLDGKGSYWAMT 168


>UNIPROTKB|F1N820 [details] [associations]
            symbol:FOXF1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007368 "determination of left/right symmetry"
            evidence=IEA] [GO:0007494 "midgut development" evidence=IEA]
            [GO:0010811 "positive regulation of cell-substrate adhesion"
            evidence=IEA] [GO:0014822 "detection of wounding" evidence=IEA]
            [GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0030198
            "extracellular matrix organization" evidence=IEA] [GO:0030335
            "positive regulation of cell migration" evidence=IEA] [GO:0031016
            "pancreas development" evidence=IEA] [GO:0043305 "negative
            regulation of mast cell degranulation" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0045198 "establishment of epithelial cell apical/basal
            polarity" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0048286 "lung alveolus development" evidence=IEA] [GO:0048371
            "lateral mesodermal cell differentiation" evidence=IEA] [GO:0048613
            "embryonic ectodermal digestive tract morphogenesis" evidence=IEA]
            [GO:0048617 "embryonic foregut morphogenesis" evidence=IEA]
            [GO:0050728 "negative regulation of inflammatory response"
            evidence=IEA] [GO:0051145 "smooth muscle cell differentiation"
            evidence=IEA] [GO:0051150 "regulation of smooth muscle cell
            differentiation" evidence=IEA] [GO:0060426 "lung vasculature
            development" evidence=IEA] [GO:0060438 "trachea development"
            evidence=IEA] [GO:0060441 "epithelial tube branching involved in
            lung morphogenesis" evidence=IEA] [GO:0060446 "branching involved
            in open tracheal system development" evidence=IEA] [GO:0060461
            "right lung morphogenesis" evidence=IEA] [GO:0060463 "lung lobe
            morphogenesis" evidence=IEA] [GO:0060841 "venous blood vessel
            development" evidence=IEA] [GO:0061030 "epithelial cell
            differentiation involved in mammary gland alveolus development"
            evidence=IEA] [GO:0071345 "cellular response to cytokine stimulus"
            evidence=IEA] [GO:0071407 "cellular response to organic cyclic
            compound" evidence=IEA] [GO:0072189 "ureter development"
            evidence=IEA] [GO:0090131 "mesenchyme migration" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0001570 "vasculogenesis"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0002053
            "positive regulation of mesenchymal cell proliferation"
            evidence=IEA] [GO:0003197 "endocardial cushion development"
            evidence=IEA] [GO:0003214 "cardiac left ventricle morphogenesis"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007224
            "smoothened signaling pathway" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0050728 GO:GO:0043565
            GO:GO:0045944 GO:GO:0030198 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0000122 GO:GO:0044212
            GO:GO:0016337 GO:GO:0030335 GO:GO:0010811 GO:GO:0071407
            GO:GO:0007224 GO:GO:0002053 GO:GO:0051150 GO:GO:0071345
            GO:GO:0043305 GeneTree:ENSGT00690000101636 OMA:MTAEVQQ
            GO:GO:0014822 EMBL:AADN02064411 EMBL:AADN02064412 IPI:IPI00576533
            Ensembl:ENSGALT00000009201 Uniprot:F1N820
        Length = 306

 Score = 105 (42.0 bits), Expect = 2.7e-05, P = 2.7e-05
 Identities = 21/46 (45%), Positives = 27/46 (58%)

Query:    13 RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNL 56
             + RFP++  +   WKNSVRHNLS+N  F K  K     G GH W +
Sbjct:     9 QSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTI 54


>UNIPROTKB|J9NRI9 [details] [associations]
            symbol:FOXK1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR000253
            InterPro:IPR001766 InterPro:IPR008984 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF00498 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50006 PROSITE:PS50039 SMART:SM00240
            SMART:SM00339 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 SUPFAM:SSF49879 GeneTree:ENSGT00700000104094
            EMBL:AAEX03004309 EMBL:AAEX03004310 Ensembl:ENSCAFT00000044839
            Uniprot:J9NRI9
        Length = 601

 Score = 109 (43.4 bits), Expect = 2.8e-05, P = 2.8e-05
 Identities = 23/63 (36%), Positives = 37/63 (58%)

Query:     9 LFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL---SDMEPV 62
             ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +   S+ + V
Sbjct:   204 IYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLV 263

Query:    63 EDA 65
             E A
Sbjct:   264 EQA 266


>ZFIN|ZDB-GENE-041001-130 [details] [associations]
            symbol:foxf2b "forkhead box F2b" species:7955
            "Danio rerio" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 ZFIN:ZDB-GENE-041001-130 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 EMBL:BX510653 IPI:IPI00636707
            RefSeq:XP_003200754.1 Ensembl:ENSDART00000103232 GeneID:100002904
            KEGG:dre:100002904 NextBio:20785637 Uniprot:E7FER3
        Length = 429

 Score = 107 (42.7 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNL 56
             F + RFP++  +   WKNSVRHNLS+N  F K  K     G GH W +
Sbjct:   140 FLQTRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTI 187


>UNIPROTKB|Q63ZH2 [details] [associations]
            symbol:foxi2-b "Forkhead box protein I2-B" species:8355
            "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 HOVERGEN:HBG067944 KO:K09401
            EMBL:BC082945 RefSeq:NP_001088107.1 UniGene:Xl.7242
            ProteinModelPortal:Q63ZH2 SMR:Q63ZH2 GeneID:494806 KEGG:xla:494806
            CTD:494806 Xenbase:XB-GENE-6255082 Uniprot:Q63ZH2
        Length = 367

 Score = 106 (42.4 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 19/45 (42%), Positives = 28/45 (62%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             E FP+Y ++   W+NS+RHNLS+N  F+K  +     G G+ W L
Sbjct:   156 ENFPFYKKSKAGWQNSIRHNLSLNDCFKKVARDDNDPGKGNYWTL 200


>UNIPROTKB|Q4H3J3 [details] [associations]
            symbol:Ci-FoxC "Transcription factor protein" species:7719
            "Ciona intestinalis" [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007219 "Notch signaling pathway" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0009653
            "anatomical structure morphogenesis" evidence=IBA] [GO:0009790
            "embryo development" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0031490 "chromatin DNA binding" evidence=IBA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0046620 "regulation of
            organ growth" evidence=IBA] [GO:0048010 "vascular endothelial
            growth factor receptor signaling pathway" evidence=IBA] [GO:0048513
            "organ development" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0043565 GO:GO:0045944 GO:GO:0007219
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0009653 GO:GO:0007389 GO:GO:0031490 GO:GO:0051090
            GO:GO:0046620 GO:GO:0048010 GO:GO:0048513 eggNOG:COG5025 KO:K09396
            GO:GO:0009888 EMBL:AB210429 RefSeq:NP_001071708.1 UniGene:Cin.33243
            ProteinModelPortal:Q4H3J3 SMR:Q4H3J3 GeneID:778609 KEGG:cin:778609
            CTD:373528 HOGENOM:HOG000169861 InParanoid:Q4H3J3 Uniprot:Q4H3J3
        Length = 511

 Score = 108 (43.1 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 20/45 (44%), Positives = 28/45 (62%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             ERFP+Y +N   W+NS+RHNLS+N  F K  +  +  G G  W +
Sbjct:   131 ERFPFYRENKQGWQNSIRHNLSLNECFVKIPRDDKKPGKGSYWTM 175


>UNIPROTKB|Q28HT3 [details] [associations]
            symbol:foxi2 "Forkhead box protein I2" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 eggNOG:COG5025 HOVERGEN:HBG067944
            KO:K09401 CTD:399823 EMBL:CR760754 RefSeq:NP_001016544.1
            UniGene:Str.6457 ProteinModelPortal:Q28HT3 SMR:Q28HT3 GeneID:549298
            KEGG:xtr:549298 Xenbase:XB-GENE-982122 Uniprot:Q28HT3
        Length = 368

 Score = 106 (42.4 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 19/45 (42%), Positives = 28/45 (62%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             E FP+Y ++   W+NS+RHNLS+N  F+K  +     G G+ W L
Sbjct:   156 ENFPFYKKSKAGWQNSIRHNLSLNDCFKKVARDDNDPGKGNYWTL 200


>UNIPROTKB|Q5M7L9 [details] [associations]
            symbol:foxd3 "Forkhead box protein D3" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0001658 "branching involved in
            ureteric bud morphogenesis" evidence=IBA] [GO:0001755 "neural crest
            cell migration" evidence=IBA] [GO:0001822 "kidney development"
            evidence=IBA] [GO:0003677 "DNA binding" evidence=ISS] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0007422 "peripheral
            nervous system development" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0014034 "neural crest cell fate commitment"
            evidence=ISS] [GO:0030318 "melanocyte differentiation"
            evidence=IBA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048484 "enteric nervous system development" evidence=IBA]
            [GO:0048485 "sympathetic nervous system development" evidence=IBA]
            [GO:0048846 "axon extension involved in axon guidance"
            evidence=IBA] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IBA] [GO:0050768 "negative regulation of
            neurogenesis" evidence=ISS] [GO:0050769 "positive regulation of
            neurogenesis" evidence=ISS] [GO:0050935 "iridophore
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0045892 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0001822 GO:GO:0050769
            GO:GO:0003690 GO:GO:0051216 GO:GO:0008134 GO:GO:0007389
            GO:GO:0001658 GO:GO:0048485 GO:GO:0030318 GO:GO:0050768
            GO:GO:0048484 GO:GO:0051090 GO:GO:0048846 eggNOG:COG5025
            GeneTree:ENSGT00700000104135 KO:K09397 GO:GO:0048937 HSSP:Q63245
            GO:GO:0014034 HOVERGEN:HBG051641 OrthoDB:EOG45MN6S GO:GO:0050935
            HOGENOM:HOG000231285 CTD:27022 EMBL:CR760163 EMBL:BC088566
            RefSeq:NP_001011383.1 UniGene:Str.11302 ProteinModelPortal:Q5M7L9
            SMR:Q5M7L9 STRING:Q5M7L9 Ensembl:ENSXETT00000023699 GeneID:496851
            KEGG:xtr:496851 Xenbase:XB-GENE-487289 InParanoid:Q5M7L9
            OMA:SSMISGH Bgee:Q5M7L9 Uniprot:Q5M7L9
        Length = 369

 Score = 106 (42.4 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 21/48 (43%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
             F   RFPYY +    W+NS+RHNLS+N  F K  +   + G G+ W L
Sbjct:   121 FISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 168


>UNIPROTKB|Q5NDM2 [details] [associations]
            symbol:foxi2-a "Forkhead box protein I2-A" species:8355
            "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 HOVERGEN:HBG067944 KO:K09401
            EMBL:AJ868112 RefSeq:NP_001089009.1 UniGene:Xl.10052
            ProteinModelPortal:Q5NDM2 SMR:Q5NDM2 GeneID:496395 KEGG:xla:496395
            CTD:496395 Xenbase:XB-GENE-982127 Uniprot:Q5NDM2
        Length = 369

 Score = 106 (42.4 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 19/45 (42%), Positives = 28/45 (62%)

Query:    14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             E FP+Y ++   W+NS+RHNLS+N  F+K  +     G G+ W L
Sbjct:   156 ENFPFYKKSKAGWQNSIRHNLSLNDCFKKVARDDHDPGKGNYWTL 200


>UNIPROTKB|J9P9K1 [details] [associations]
            symbol:FOXD3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104135 EMBL:AAEX03003765 EMBL:AAEX03003766
            Ensembl:ENSCAFT00000048793 Uniprot:J9P9K1
        Length = 370

 Score = 106 (42.4 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 21/48 (43%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
             F   RFPYY +    W+NS+RHNLS+N  F K  +   + G G+ W L
Sbjct:   154 FISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 201


>ZFIN|ZDB-GENE-100922-240 [details] [associations]
            symbol:foxj2 "forkhead box J2" species:7955 "Danio
            rerio" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-100922-240 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104094 EMBL:CR848818 IPI:IPI00994143
            RefSeq:XP_686801.4 Ensembl:ENSDART00000080396 GeneID:558490
            KEGG:dre:558490 NextBio:20882497 Bgee:E7FA97 Uniprot:E7FA97
        Length = 516

 Score = 108 (43.1 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 25/63 (39%), Positives = 35/63 (55%)

Query:     1 MALTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNLSD 58
             M L+ N    +  + FPYY +    WKNS+RHNLS+N  FRK  +  +  G G  W + D
Sbjct:    76 MKLSLNDIYTWISDTFPYYCRAGRGWKNSIRHNLSLNKCFRKVPRPQSDPGKGSYWTM-D 134

Query:    59 MEP 61
             + P
Sbjct:   135 VPP 137


>UNIPROTKB|Q9DEN3 [details] [associations]
            symbol:foxd3-b "Forkhead box protein D3-B" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0014034 "neural crest cell fate commitment" evidence=ISS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IDA] [GO:0050768 "negative regulation of neurogenesis"
            evidence=IMP] [GO:0050769 "positive regulation of neurogenesis"
            evidence=ISS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045892 GO:GO:0003677
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0050769 GO:GO:0050768 KO:K09397 HSSP:Q63245
            GO:GO:0014034 HOVERGEN:HBG051641 EMBL:AJ298866 EMBL:BC072772
            RefSeq:NP_001079078.1 UniGene:Xl.523 ProteinModelPortal:Q9DEN3
            SMR:Q9DEN3 GeneID:373610 KEGG:xla:373610 CTD:373610
            Xenbase:XB-GENE-6252892 Uniprot:Q9DEN3
        Length = 371

 Score = 106 (42.4 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 21/48 (43%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
             F   RFPYY +    W+NS+RHNLS+N  F K  +   + G G+ W L
Sbjct:   123 FISSRFPYYREKFPAWQNSIRHNLSLNDCFIKIPREPGNPGKGNYWTL 170


>UNIPROTKB|Q9DEN4 [details] [associations]
            symbol:foxd3-a "Forkhead box protein D3-A" species:8355
            "Xenopus laevis" [GO:0001707 "mesoderm formation" evidence=IMP]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0014034 "neural crest cell fate commitment" evidence=IMP]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IMP;IDA] [GO:0050768 "negative regulation of neurogenesis"
            evidence=IMP] [GO:0050769 "positive regulation of neurogenesis"
            evidence=IMP] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045892 GO:GO:0003677
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0050769 GO:GO:0001707 GO:GO:0050768 KO:K09397
            HSSP:Q63245 GO:GO:0014034 HOVERGEN:HBG051641 EMBL:AB014611
            EMBL:AJ298865 EMBL:BC123272 PIR:G56556 RefSeq:NP_001079026.1
            UniGene:Xl.525 ProteinModelPortal:Q9DEN4 SMR:Q9DEN4 GeneID:373548
            KEGG:xla:373548 CTD:373548 Xenbase:XB-GENE-865691 Uniprot:Q9DEN4
        Length = 371

 Score = 106 (42.4 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 21/48 (43%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
             F   RFPYY +    W+NS+RHNLS+N  F K  +   + G G+ W L
Sbjct:   123 FISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 170


>ZFIN|ZDB-GENE-980526-143 [details] [associations]
            symbol:foxd3 "forkhead box D3" species:7955 "Danio
            rerio" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA;IDA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0009790 "embryo
            development" evidence=IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0001822
            "kidney development" evidence=IBA] [GO:0048846 "axon extension
            involved in axon guidance" evidence=IBA] [GO:0001658 "branching
            involved in ureteric bud morphogenesis" evidence=IBA] [GO:0008301
            "DNA binding, bending" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0030318 "melanocyte differentiation"
            evidence=IGI] [GO:0010629 "negative regulation of gene expression"
            evidence=IGI;IMP] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0060351 "cartilage
            development involved in endochondral bone morphogenesis"
            evidence=IMP] [GO:0014032 "neural crest cell development"
            evidence=IGI;IMP] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA;IDA] [GO:0001071 "nucleic acid binding transcription
            factor activity" evidence=IDA] [GO:0051216 "cartilage development"
            evidence=IMP] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IMP] [GO:0048484 "enteric nervous system
            development" evidence=IMP] [GO:0050935 "iridophore differentiation"
            evidence=IMP] [GO:0007422 "peripheral nervous system development"
            evidence=IMP] [GO:0050931 "pigment cell differentiation"
            evidence=IGI;IMP] [GO:0048485 "sympathetic nervous system
            development" evidence=IMP] [GO:0001755 "neural crest cell
            migration" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-980526-143 GO:GO:0045892 GO:GO:0001755 GO:GO:0043565
            GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
            GO:GO:0001822 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0001658 GO:GO:0048485 GO:GO:0030318 GO:GO:0048484
            GO:GO:0051090 GO:GO:0048846 GO:GO:0060351 GO:GO:0048937
            HOVERGEN:HBG051641 GO:GO:0050935 EMBL:BC095603 IPI:IPI00512255
            UniGene:Dr.75816 ProteinModelPortal:Q502Q4 SMR:Q502Q4
            InParanoid:Q502Q4 ArrayExpress:Q502Q4 Uniprot:Q502Q4
        Length = 371

 Score = 106 (42.4 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 21/48 (43%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
             F   RFPYY +    W+NS+RHNLS+N  F K  +   + G G+ W L
Sbjct:   125 FISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 172


>UNIPROTKB|F1RI50 [details] [associations]
            symbol:FOXK1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0030308 "negative
            regulation of cell growth" evidence=IEA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR000253 InterPro:IPR001766
            InterPro:IPR008984 InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006
            PROSITE:PS50039 SMART:SM00240 SMART:SM00339 GO:GO:0045892
            GO:GO:0045893 GO:GO:0005730 GO:GO:0030308 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006357
            Gene3D:2.60.200.20 SUPFAM:SSF49879 GeneTree:ENSGT00700000104094
            OMA:CEVGPKE EMBL:CU928310 Ensembl:ENSSSCT00000008315 Uniprot:F1RI50
        Length = 625

 Score = 109 (43.4 bits), Expect = 3.0e-05, P = 3.0e-05
 Identities = 23/63 (36%), Positives = 37/63 (58%)

Query:     9 LFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL---SDMEPV 62
             ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +   S+ + V
Sbjct:   217 IYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLV 276

Query:    63 EDA 65
             E A
Sbjct:   277 EQA 279


>FB|FBgn0004896 [details] [associations]
            symbol:fd59A "forkhead domain 59A" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] [GO:0009790 "embryo
            development" evidence=IBA;NAS] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0048485 "sympathetic
            nervous system development" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0048846 "axon extension involved in axon
            guidance" evidence=IBA] [GO:0048484 "enteric nervous system
            development" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0048937 "lateral line nerve glial cell development"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 EMBL:AE013599 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 GO:GO:0048485 GO:GO:0048484
            GO:GO:0051090 GO:GO:0048846 eggNOG:COG5025 GO:GO:0009888
            EMBL:AY084204 EMBL:BT025198 EMBL:M96442 PIR:C46178
            RefSeq:NP_523814.1 UniGene:Dm.738 ProteinModelPortal:Q02361
            SMR:Q02361 DIP:DIP-19745N MINT:MINT-295526 PRIDE:Q02361
            EnsemblMetazoa:FBtr0071898 GeneID:37631 KEGG:dme:Dmel_CG3668
            CTD:37631 FlyBase:FBgn0004896 GeneTree:ENSGT00700000104135
            InParanoid:Q02361 KO:K09397 OMA:FNFFANA OrthoDB:EOG4Z08NS
            PhylomeDB:Q02361 GenomeRNAi:37631 NextBio:804648 Bgee:Q02361
            GermOnline:CG3668 GO:GO:0048937 Uniprot:Q02361
        Length = 456

 Score = 107 (42.7 bits), Expect = 3.1e-05, P = 3.1e-05
 Identities = 21/51 (41%), Positives = 28/51 (54%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNLSDM 59
             F   RFPYY      W+NS+RHNLS+N  F K  +   + G G+ W L  +
Sbjct:   114 FIMSRFPYYKDKFPAWQNSIRHNLSLNDCFIKVPREPGNPGKGNFWTLDPL 164


>MGI|MGI:1347463 [details] [associations]
            symbol:Foxd1 "forkhead box D1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001658 "branching
            involved in ureteric bud morphogenesis" evidence=IDA] [GO:0001755
            "neural crest cell migration" evidence=IBA] [GO:0001822 "kidney
            development" evidence=IMP] [GO:0003677 "DNA binding"
            evidence=ISO;IDA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007411 "axon guidance"
            evidence=IMP] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=ISO;IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0010628
            "positive regulation of gene expression" evidence=IMP] [GO:0030318
            "melanocyte differentiation" evidence=IBA] [GO:0030513 "positive
            regulation of BMP signaling pathway" evidence=IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=IMP]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0048484 "enteric nervous
            system development" evidence=IBA] [GO:0048485 "sympathetic nervous
            system development" evidence=IBA] [GO:0048846 "axon extension
            involved in axon guidance" evidence=IBA] [GO:0048937 "lateral line
            nerve glial cell development" evidence=IBA] [GO:0050935 "iridophore
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            [GO:0060678 "dichotomous subdivision of terminal units involved in
            ureteric bud branching" evidence=IMP] [GO:0072076 "nephrogenic
            mesenchyme development" evidence=IMP] [GO:0072210 "metanephric
            nephron development" evidence=IMP] [GO:0072213 "metanephric capsule
            development" evidence=IMP] [GO:0072267 "metanephric capsule
            specification" evidence=IMP] [GO:0072268 "pattern specification
            involved in metanephros development" evidence=IMP] [GO:0090184
            "positive regulation of kidney development" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            MGI:MGI:1347463 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0030513 GO:GO:0051216 GO:GO:0008134
            GO:GO:0072210 GO:GO:0048485 GO:GO:0030318 GO:GO:0048484
            GO:GO:0051090 GO:GO:0090184 GO:GO:0048846 eggNOG:COG5025
            GeneTree:ENSGT00700000104135 KO:K09397 GO:GO:0048937 CTD:2297
            HOVERGEN:HBG051641 GO:GO:0060678 GO:GO:0050935 GO:GO:0072267
            EMBL:L38607 EMBL:AK132390 EMBL:AK142034 IPI:IPI00120011
            RefSeq:NP_032268.2 UniGene:Mm.347441 ProteinModelPortal:Q61345
            SMR:Q61345 STRING:Q61345 PhosphoSite:Q61345 PRIDE:Q61345
            Ensembl:ENSMUST00000105098 GeneID:15229 KEGG:mmu:15229
            HOGENOM:HOG000231285 InParanoid:Q3UQW8 OMA:GLQLQPY NextBio:287823
            Bgee:Q61345 CleanEx:MM_FOXD1 Genevestigator:Q61345 GO:GO:0072076
            Uniprot:Q61345
        Length = 456

 Score = 107 (42.7 bits), Expect = 3.1e-05, P = 3.1e-05
 Identities = 23/55 (41%), Positives = 31/55 (56%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNLSDMEPVE 63
             F   RFPYY +    W+NS+RHNLS+N  F K  +   + G G+ W L D E  +
Sbjct:   159 FISSRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL-DPESAD 212


>UNIPROTKB|P79772 [details] [associations]
            symbol:FOXD3 "Forkhead box protein D3" species:9031 "Gallus
            gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0043009 "chordate embryonic development" evidence=IDA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISS;IBA] [GO:0001658
            "branching involved in ureteric bud morphogenesis" evidence=IBA]
            [GO:0001755 "neural crest cell migration" evidence=IBA] [GO:0001822
            "kidney development" evidence=IBA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0030318 "melanocyte differentiation" evidence=IBA] [GO:0048484
            "enteric nervous system development" evidence=IBA] [GO:0048485
            "sympathetic nervous system development" evidence=IBA] [GO:0048846
            "axon extension involved in axon guidance" evidence=IBA]
            [GO:0048937 "lateral line nerve glial cell development"
            evidence=IBA] [GO:0050935 "iridophore differentiation"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0051216
            "cartilage development" evidence=IBA] [GO:0001829 "trophectodermal
            cell differentiation" evidence=IEA] [GO:0001892 "embryonic placenta
            development" evidence=IEA] [GO:0044212 "transcription regulatory
            region DNA binding" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0001755
            GO:GO:0043565 GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0000122
            GO:GO:0008301 GO:GO:0044212 GO:GO:0001822 GO:GO:0003690
            GO:GO:0051216 GO:GO:0008134 GO:GO:0007389 GO:GO:0001658
            GO:GO:0048485 GO:GO:0030318 GO:GO:0048484 GO:GO:0051090
            GO:GO:0043009 GO:GO:0048846 KO:K09397 GO:GO:0048937
            HOVERGEN:HBG051641 GO:GO:0050935 EMBL:U37274 IPI:IPI00582465
            RefSeq:NP_990282.1 UniGene:Gga.468 ProteinModelPortal:P79772
            SMR:P79772 STRING:P79772 GeneID:395794 KEGG:gga:395794 CTD:27022
            InParanoid:P79772 NextBio:20815862 Uniprot:P79772
        Length = 394

 Score = 106 (42.4 bits), Expect = 3.2e-05, P = 3.2e-05
 Identities = 21/48 (43%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
             F   RFPYY +    W+NS+RHNLS+N  F K  +   + G G+ W L
Sbjct:   146 FISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 193


>UNIPROTKB|F1Q2J8 [details] [associations]
            symbol:FOXK1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR000253
            InterPro:IPR001766 InterPro:IPR008984 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF00498 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50006 PROSITE:PS50039 SMART:SM00240
            SMART:SM00339 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 Gene3D:2.60.200.20 SUPFAM:SSF49879
            GeneTree:ENSGT00700000104094 EMBL:AAEX03004309 EMBL:AAEX03004310
            Ensembl:ENSCAFT00000025556 Uniprot:F1Q2J8
        Length = 674

 Score = 109 (43.4 bits), Expect = 3.3e-05, P = 3.3e-05
 Identities = 23/63 (36%), Positives = 37/63 (58%)

Query:     9 LFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL---SDMEPV 62
             ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +   S+ + V
Sbjct:   277 IYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLV 336

Query:    63 EDA 65
             E A
Sbjct:   337 EQA 339


>ZFIN|ZDB-GENE-021008-1 [details] [associations]
            symbol:foxn1 "forkhead box N1" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0009790 "embryo
            development" evidence=IBA] [GO:0005667 "transcription factor
            complex" evidence=IBA] [GO:0050673 "epithelial cell proliferation"
            evidence=IBA] [GO:0030216 "keratinocyte differentiation"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0048538 "thymus development" evidence=IMP] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-021008-1 GO:GO:0030216 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0048538
            GO:GO:0008134 GO:GO:0050673 GO:GO:0007389 GO:GO:0051090 CTD:8456
            KO:K09407 HSSP:P98177 EMBL:AJ517351 IPI:IPI00554388
            RefSeq:NP_997738.1 UniGene:Dr.30207 ProteinModelPortal:Q7ZTC0
            GeneID:266748 KEGG:dre:266748 HOVERGEN:HBG101280 InParanoid:Q7ZTC0
            NextBio:20804820 Uniprot:Q7ZTC0
        Length = 565

 Score = 108 (43.1 bits), Expect = 3.3e-05, P = 3.3e-05
 Identities = 25/51 (49%), Positives = 29/51 (56%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQG----AGHLWNLS 57
             F  E FPY+    D WKNSVRHNLS+N  F K V+   G     G LW L+
Sbjct:   249 FMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEK-VENKNGNSSRKGCLWALN 298


>SGD|S000001393 [details] [associations]
            symbol:FKH1 "Forkhead family transcription factor"
            species:4932 "Saccharomyces cerevisiae" [GO:0006338 "chromatin
            remodeling" evidence=IGI;IMP] [GO:0007535 "donor selection"
            evidence=IGI;IMP] [GO:0034244 "negative regulation of transcription
            elongation from RNA polymerase II promoter" evidence=IGI;IMP]
            [GO:0031124 "mRNA 3'-end processing" evidence=IMP] [GO:0005634
            "nucleus" evidence=IEA;IDA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0071406 "cellular response to methylmercury" evidence=IGI;IMP]
            [GO:0019237 "centromeric DNA binding" evidence=IDA] [GO:0000790
            "nuclear chromatin" evidence=IBA] [GO:0003705 "RNA polymerase II
            distal enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0007005 "mitochondrion organization"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0006369 "termination of RNA polymerase II
            transcription" evidence=IGI;IMP] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
            [GO:0060277 "negative regulation of transcription involved in G1
            phase of mitotic cell cycle" evidence=IGI] [GO:0090055 "positive
            regulation of chromatin silencing at silent mating-type cassette"
            evidence=IGI;IMP] [GO:0090419 "negative regulation of transcription
            involved in G2/M-phase of mitotic cell cycle" evidence=IMP]
            [GO:0000978 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding" evidence=IDA] [GO:0001077 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=IGI;IDA] [GO:0001078 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in negative
            regulation of transcription" evidence=IGI;IDA] [GO:2000221
            "negative regulation of pseudohyphal growth" evidence=IGI]
            [GO:0090282 "positive regulation of transcription involved in
            G2/M-phase of mitotic cell cycle" evidence=IGI] InterPro:IPR000253
            InterPro:IPR001766 InterPro:IPR008984 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF00498 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50006 PROSITE:PS50039 SMART:SM00240
            SMART:SM00339 SGD:S000001393 GO:GO:0071406 EMBL:BK006942
            GO:GO:0001078 Gene3D:1.10.10.10 InterPro:IPR011991
            Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000978 GO:GO:0001077 GO:GO:0006338 GO:GO:0000790
            GO:GO:0019237 GO:GO:0003690 GO:GO:0007005 EMBL:Z38059 GO:GO:0008134
            EMBL:DQ115392 GO:GO:0051090 GO:GO:0034244 GO:GO:0006369
            GO:GO:0007535 GO:GO:0031124 eggNOG:COG5025 GO:GO:2000221
            EMBL:L38848 PIR:S48403 RefSeq:NP_012135.1 ProteinModelPortal:P40466
            SMR:P40466 DIP:DIP-5220N IntAct:P40466 MINT:MINT-528267
            STRING:P40466 PaxDb:P40466 EnsemblFungi:YIL131C GeneID:854675
            KEGG:sce:YIL131C CYGD:YIL131c GeneTree:ENSGT00690000101938
            OMA:TIMMEED OrthoDB:EOG4R7ZKG NextBio:977271 Genevestigator:P40466
            GermOnline:YIL131C GO:GO:0060277 GO:GO:0090419 GO:GO:0090055
            GO:GO:0090282 Uniprot:P40466
        Length = 484

 Score = 107 (42.7 bits), Expect = 3.4e-05, P = 3.4e-05
 Identities = 25/72 (34%), Positives = 39/72 (54%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKAS--QGAGHLWNLSDMEPVEDASKS 68
             F  + + +Y  +   W+NSVRHNLS+N  F K  K +  QG G  W +SD   V     +
Sbjct:   332 FISDNYAFYRFSQMAWQNSVRHNLSLNKAFEKVPKRAGQQGKGMNWKISD--EVRRDFLN 389

Query:    69 NWVSIKVTGVKR 80
              W + K++ ++R
Sbjct:   390 KWNAGKLSKIRR 401


>UNIPROTKB|F1N694 [details] [associations]
            symbol:LOC529218 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0060021 "palate development" evidence=IEA]
            [GO:0048806 "genitalia development" evidence=IEA] [GO:0048596
            "embryonic camera-type eye morphogenesis" evidence=IEA] [GO:0048566
            "embryonic digestive tract development" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042249
            "establishment of planar polarity of embryonic epithelium"
            evidence=IEA] [GO:0030198 "extracellular matrix organization"
            evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0045892 GO:GO:0043565
            GO:GO:0045944 GO:GO:0030198 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0005667 GO:GO:0048806
            GO:GO:0048566 GO:GO:0060021 GO:GO:0042249
            GeneTree:ENSGT00690000101636 KO:K09399 OMA:SPYIKQQ
            EMBL:DAAA02055925 IPI:IPI00842377 RefSeq:XP_003587799.1
            Ensembl:ENSBTAT00000042722 GeneID:529218 KEGG:bta:529218
            Uniprot:F1N694
        Length = 351

 Score = 105 (42.0 bits), Expect = 3.4e-05, P = 3.4e-05
 Identities = 24/56 (42%), Positives = 30/56 (53%)

Query:     3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNL 56
             LT +    F + RFP++      WKNSVRHNLS+N  F K  K     G GH W +
Sbjct:    21 LTLSEIYHFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTI 76


>UNIPROTKB|E2QS90 [details] [associations]
            symbol:FOXD3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0001892 "embryonic placenta
            development" evidence=IEA] [GO:0001829 "trophectodermal cell
            differentiation" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0044212
            GO:GO:0001829 GO:GO:0001892 Ensembl:ENSCAFT00000021812
            Uniprot:E2QS90
        Length = 411

 Score = 106 (42.4 bits), Expect = 3.5e-05, P = 3.5e-05
 Identities = 21/48 (43%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
             F   RFPYY +    W+NS+RHNLS+N  F K  +   + G G+ W L
Sbjct:   171 FISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 218


>UNIPROTKB|F1MP14 [details] [associations]
            symbol:F1MP14 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0030308 "negative
            regulation of cell growth" evidence=IEA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR000253 InterPro:IPR001766
            InterPro:IPR008984 InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006
            PROSITE:PS50039 SMART:SM00240 SMART:SM00339 GO:GO:0045892
            GO:GO:0045893 GO:GO:0005730 GO:GO:0030308 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006357
            Gene3D:2.60.200.20 SUPFAM:SSF49879 GeneTree:ENSGT00700000104094
            OMA:CEVGPKE EMBL:DAAA02058363 EMBL:DAAA02058364 IPI:IPI00701447
            Ensembl:ENSBTAT00000025710 Uniprot:F1MP14
        Length = 707

 Score = 109 (43.4 bits), Expect = 3.5e-05, P = 3.5e-05
 Identities = 23/63 (36%), Positives = 37/63 (58%)

Query:     9 LFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL---SDMEPV 62
             ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +   S+ + V
Sbjct:   313 IYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLV 372

Query:    63 EDA 65
             E A
Sbjct:   373 EQA 375


>UNIPROTKB|E2R718 [details] [associations]
            symbol:FOXL2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            Ensembl:ENSCAFT00000012132 Uniprot:E2R718
        Length = 241

 Score = 102 (41.0 bits), Expect = 3.5e-05, P = 3.5e-05
 Identities = 24/60 (40%), Positives = 34/60 (56%)

Query:    15 RFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA--GHLWNLSDMEPV-EDA-SKSNW 70
             +FP+Y +N   W+NS+RHNLS+N  F K  +   G   G+ W L   +P  ED   K N+
Sbjct:    87 KFPFYEKNKKGWQNSIRHNLSLNECFIKVPREGGGERKGNYWTL---DPACEDMFEKGNY 143


>MGI|MGI:1347488 [details] [associations]
            symbol:Foxk1 "forkhead box K1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0000287 "magnesium ion
            binding" evidence=IBA] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IC] [GO:0005667 "transcription
            factor complex" evidence=IBA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
            of transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0007517 "muscle organ development" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0030154 "cell differentiation" evidence=IEA] [GO:0030308
            "negative regulation of cell growth" evidence=IDA] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045786 "negative
            regulation of cell cycle" evidence=TAS] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IDA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR000253 InterPro:IPR001766 InterPro:IPR008984
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006 PROSITE:PS50039
            SMART:SM00240 SMART:SM00339 MGI:MGI:1347488 GO:GO:0045892
            GO:GO:0045893 GO:GO:0030154 GO:GO:0005730 GO:GO:0030308
            GO:GO:0000287 GO:GO:0003677 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0009790
            GO:GO:0007517 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0045786 GO:GO:0051090 eggNOG:COG5025 GO:GO:0009888
            GeneTree:ENSGT00700000104094 CTD:221937 HOGENOM:HOG000072588
            HOVERGEN:HBG051649 KO:K09404 OMA:CEVGPKE ChiTaRS:FOXK1 EMBL:L26507
            EMBL:AK144418 EMBL:AK147375 EMBL:U95016 IPI:IPI00656285 PIR:A56051
            RefSeq:NP_951031.2 UniGene:Mm.24214 PDB:2A3S PDB:2D2W PDBsum:2A3S
            PDBsum:2D2W ProteinModelPortal:P42128 SMR:P42128 IntAct:P42128
            STRING:P42128 PhosphoSite:P42128 PaxDb:P42128 PRIDE:P42128
            DNASU:17425 Ensembl:ENSMUST00000072837 GeneID:17425 KEGG:mmu:17425
            UCSC:uc009aio.1 InParanoid:P42128 EvolutionaryTrace:P42128
            NextBio:292048 Bgee:P42128 CleanEx:MM_FOXK1 Genevestigator:P42128
            GermOnline:ENSMUSG00000056493 Uniprot:P42128
        Length = 719

 Score = 109 (43.4 bits), Expect = 3.6e-05, P = 3.6e-05
 Identities = 23/63 (36%), Positives = 37/63 (58%)

Query:     9 LFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL---SDMEPV 62
             ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +   S+ + V
Sbjct:   317 IYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLV 376

Query:    63 EDA 65
             E A
Sbjct:   377 EQA 379


>RGD|1309643 [details] [associations]
            symbol:Foxk1 "forkhead box K1" species:10116 "Rattus norvegicus"
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
            "nucleolus" evidence=IEA;ISO] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IEA;ISO]
            [GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IEA;ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IEA;ISO] InterPro:IPR000253
            InterPro:IPR001766 InterPro:IPR008984 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF00498 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50006 PROSITE:PS50039 SMART:SM00240
            SMART:SM00339 RGD:1309643 GO:GO:0045892 GO:GO:0045893 GO:GO:0005730
            GO:GO:0030308 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006357 Gene3D:2.60.200.20 SUPFAM:SSF49879
            GeneTree:ENSGT00700000104094 CTD:221937 KO:K09404 OMA:CEVGPKE
            OrthoDB:EOG4RV2TP IPI:IPI00189970 RefSeq:NP_001032296.2
            UniGene:Rn.211697 PhosphoSite:D3ZU55 Ensembl:ENSRNOT00000001466
            GeneID:304298 KEGG:rno:304298 UCSC:RGD:1309643 NextBio:652822
            Uniprot:D3ZU55
        Length = 719

 Score = 109 (43.4 bits), Expect = 3.6e-05, P = 3.6e-05
 Identities = 23/63 (36%), Positives = 37/63 (58%)

Query:     9 LFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL---SDMEPV 62
             ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +   S+ + V
Sbjct:   317 IYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLV 376

Query:    63 EDA 65
             E A
Sbjct:   377 EQA 379


>FB|FBgn0000659 [details] [associations]
            symbol:fkh "fork head" species:7227 "Drosophila melanogaster"
            [GO:0005634 "nucleus" evidence=ISS;NAS;IDA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS;IDA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=ISS;NAS]
            [GO:0007443 "Malpighian tubule morphogenesis" evidence=IMP;TAS]
            [GO:0007439 "ectodermal digestive tract development" evidence=TAS]
            [GO:0007435 "salivary gland morphogenesis" evidence=IMP;TAS]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IMP;TAS] [GO:0007432 "salivary gland boundary
            specification" evidence=NAS] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IBA;TAS]
            [GO:0001706 "endoderm formation" evidence=TAS] [GO:0007431
            "salivary gland development" evidence=IMP;NAS] [GO:0035072
            "ecdysone-mediated induction of salivary gland cell autophagic cell
            death" evidence=IDA] [GO:0043069 "negative regulation of programmed
            cell death" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0030308 "negative regulation of cell growth" evidence=IMP]
            [GO:0040015 "negative regulation of multicellular organism growth"
            evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0019904 "protein domain specific binding"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            EMBL:AE014297 GO:GO:0019904 GO:GO:0043066 GO:GO:0030308
            GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0000122 GO:GO:0008301
            GO:GO:0003690 GO:GO:0040015 GO:GO:0008134 GO:GO:0007389
            GO:GO:0051090 GO:GO:0042023 GO:GO:0035072 GO:GO:0007443
            eggNOG:COG5025 GO:GO:0001706 GeneTree:ENSGT00700000104135
            EMBL:J03177 PIR:A32380 RefSeq:NP_001163762.1 RefSeq:NP_524542.1
            UniGene:Dm.22561 ProteinModelPortal:P14734 SMR:P14734
            DIP:DIP-17045N IntAct:P14734 MINT:MINT-307436 STRING:P14734
            PRIDE:P14734 EnsemblMetazoa:FBtr0085321 EnsemblMetazoa:FBtr0300259
            GeneID:43383 KEGG:dme:Dmel_CG10002 CTD:43383 FlyBase:FBgn0000659
            InParanoid:P14734 KO:K08035 OMA:HANAELC OrthoDB:EOG4280HD
            PhylomeDB:P14734 GenomeRNAi:43383 NextBio:833634 Bgee:P14734
            GermOnline:CG10002 GO:GO:0007439 InterPro:IPR018533 Pfam:PF09354
            Uniprot:P14734
        Length = 510

 Score = 107 (42.7 bits), Expect = 3.7e-05, P = 3.7e-05
 Identities = 21/48 (43%), Positives = 27/48 (56%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
             F  + FP+Y QN  RW+NS+RH+LS N  F K  +     G G  W L
Sbjct:   239 FIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKIPRTPDKPGKGSFWTL 286


>UNIPROTKB|Q4H3I2 [details] [associations]
            symbol:Ci-FoxK "Transcription factor protein" species:7719
            "Ciona intestinalis" [GO:0000287 "magnesium ion binding"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] InterPro:IPR000253 InterPro:IPR001766
            InterPro:IPR008984 InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006
            PROSITE:PS50039 SMART:SM00240 SMART:SM00339 GO:GO:0000287
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 eggNOG:COG5025 GO:GO:0009888 KO:K09404
            EMBL:AB210440 RefSeq:NP_001071715.1 UniGene:Cin.25903
            ProteinModelPortal:Q4H3I2 SMR:Q4H3I2 GeneID:778618 KEGG:cin:778618
            CTD:588569 InParanoid:Q4H3I2 Uniprot:Q4H3I2
        Length = 614

 Score = 108 (43.1 bits), Expect = 3.7e-05, P = 3.7e-05
 Identities = 23/63 (36%), Positives = 37/63 (58%)

Query:     9 LFFH-RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL---SDMEPV 62
             ++ H  + +PYY   D  W+NS+RHNLS+N +F K  ++ +  G G  W +   S+ + V
Sbjct:   297 IYAHITKNYPYYRTADKGWQNSIRHNLSLNRYFVKVPRSQEESGKGSFWKVDPASERKLV 356

Query:    63 EDA 65
             E A
Sbjct:   357 EQA 359


>ZFIN|ZDB-GENE-980605-4 [details] [associations]
            symbol:foxd5 "forkhead box D5" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0001755 "neural crest cell migration" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0048846 "axon
            extension involved in axon guidance" evidence=IBA] [GO:0050935
            "iridophore differentiation" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IBA] [GO:0030318 "melanocyte differentiation"
            evidence=IBA] [GO:0001822 "kidney development" evidence=IBA]
            [GO:0001658 "branching involved in ureteric bud morphogenesis"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0048485 "sympathetic nervous system development"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0048484 "enteric nervous system development" evidence=IBA]
            [GO:0051216 "cartilage development" evidence=IBA] [GO:0009790
            "embryo development" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0032525
            "somite rostral/caudal axis specification" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-980605-4 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0001822 GO:GO:0003690
            GO:GO:0051216 GO:GO:0008134 GO:GO:0001658 GO:GO:0048485
            GO:GO:0030318 GO:GO:0048484 GO:GO:0051090 GO:GO:0048846
            GO:GO:0032525 GO:GO:0048937 HOVERGEN:HBG051641 GO:GO:0050935
            EMBL:BC097095 IPI:IPI00481008 UniGene:Dr.75818
            ProteinModelPortal:Q4QRE5 SMR:Q4QRE5 STRING:Q4QRE5
            InParanoid:Q4QRE5 ArrayExpress:Q4QRE5 Uniprot:Q4QRE5
        Length = 321

 Score = 104 (41.7 bits), Expect = 3.8e-05, P = 3.8e-05
 Identities = 20/48 (41%), Positives = 29/48 (60%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
             F   +FPYY +    W+NS+RHNLS+N  F K  +   + G G+ W+L
Sbjct:   102 FISNKFPYYKEKFPAWQNSIRHNLSLNDCFIKIPREPGNPGKGNYWSL 149


>UNIPROTKB|F6USR8 [details] [associations]
            symbol:FOXD3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104135 OMA:AAGAYSH Ensembl:ENSCAFT00000021812
            EMBL:AAEX03003765 EMBL:AAEX03003766 Uniprot:F6USR8
        Length = 439

 Score = 106 (42.4 bits), Expect = 3.8e-05, P = 3.8e-05
 Identities = 21/48 (43%), Positives = 28/48 (58%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
             F   RFPYY +    W+NS+RHNLS+N  F K  +   + G G+ W L
Sbjct:   171 FISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 218


>UNIPROTKB|Q12950 [details] [associations]
            symbol:FOXD4 "Forkhead box protein D4" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=TAS] [GO:0005634 "nucleus"
            evidence=IDA;NAS] [GO:0007275 "multicellular organismal
            development" evidence=NAS] [GO:0001755 "neural crest cell
            migration" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=ISS;IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0030318
            "melanocyte differentiation" evidence=IBA] [GO:0030513 "positive
            regulation of BMP signaling pathway" evidence=IBA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0048484 "enteric nervous system
            development" evidence=IBA] [GO:0048485 "sympathetic nervous system
            development" evidence=IBA] [GO:0048846 "axon extension involved in
            axon guidance" evidence=IBA] [GO:0048937 "lateral line nerve glial
            cell development" evidence=IBA] [GO:0050935 "iridophore
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            [GO:0060678 "dichotomous subdivision of terminal units involved in
            ureteric bud branching" evidence=IBA] [GO:0090184 "positive
            regulation of kidney development" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0001755
            GO:GO:0043565 GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0009790 GO:GO:0003690 GO:GO:0030513 GO:GO:0051216
            GO:GO:0008134 GO:GO:0007389 GO:GO:0048485 GO:GO:0030318
            GO:GO:0048484 GO:GO:0051090 GO:GO:0090184 GO:GO:0048846
            EMBL:AL449043 eggNOG:COG5025 KO:K09397 GO:GO:0048937
            HOVERGEN:HBG051641 OrthoDB:EOG45MN6S GO:GO:0060678 GO:GO:0050935
            EMBL:AF343004 EMBL:BC089432 EMBL:BC136570 EMBL:BC136571 EMBL:U13223
            EMBL:AF452724 IPI:IPI00030339 PIR:S51628 RefSeq:NP_997188.2
            UniGene:Hs.584759 ProteinModelPortal:Q12950 SMR:Q12950
            STRING:Q12950 DMDM:311033480 PaxDb:Q12950 PRIDE:Q12950
            Ensembl:ENST00000382500 GeneID:2298 KEGG:hsa:2298 UCSC:uc003zfz.3
            CTD:2298 GeneCards:GC09M000116 HGNC:HGNC:3805 HPA:HPA012836
            MIM:601092 neXtProt:NX_Q12950 PharmGKB:PA28222 InParanoid:Q12950
            OMA:GGCTSFS PhylomeDB:Q12950 GenomeRNAi:2298 NextBio:9327
            Bgee:Q12950 CleanEx:HS_FOXD4 Genevestigator:Q12950
            GermOnline:ENSG00000184492 Uniprot:Q12950
        Length = 439

 Score = 106 (42.4 bits), Expect = 3.8e-05, P = 3.8e-05
 Identities = 21/48 (43%), Positives = 29/48 (60%)

Query:    11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
             F  +RFPYY +    W+NS+RHNLS+N  F K  +     G G+ W+L
Sbjct:   133 FISDRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGRPGKGNYWSL 180


>WB|WBGene00001438 [details] [associations]
            symbol:fkh-6 species:6239 "Caenorhabditis elegans"
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0002009 "morphogenesis of an
            epithelium" evidence=IMP] [GO:0018991 "oviposition" evidence=IMP]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
            genitalia development" evidence=IMP] [GO:0040002 "collagen and
            cuticulin-based cuticle development" evidence=IMP] [GO:0008406
            "gonad development" evidence=IMP] [GO:0006898 "receptor-mediated
            endocytosis" evidence=IMP] [GO:0008584 "male gonad development"
            evidence=IMP] [GO:0019100 "male germ-line sex determination"
            evidence=IGI] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0002009
            GO:GO:0006898 GO:GO:0018991 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008584
            GO:GO:0008301 GO:GO:0009790 GO:GO:0040035 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 GO:GO:0040002 GO:GO:0051090
            eggNOG:COG5025 HSSP:Q99958 GO:GO:0019100
            GeneTree:ENSGT00700000104094 EMBL:FO080154 PIR:T15311
            RefSeq:NP_494775.1 UniGene:Cel.16060 ProteinModelPortal:Q10924
            SMR:Q10924 EnsemblMetazoa:B0286.5 GeneID:181907
            KEGG:cel:CELE_B0286.5 UCSC:B0286.5 CTD:181907 WormBase:B0286.5
            HOGENOM:HOG000017226 InParanoid:Q10924 OMA:GQSCAND NextBio:915754
            Uniprot:Q10924
        Length = 323

 Score = 104 (41.7 bits), Expect = 3.8e-05, P = 3.8e-05
 Identities = 28/91 (30%), Positives = 42/91 (46%)

Query:     3 LTANLRLFFHRERFPYYNQNDDR----WKNSVRHNLSINPHFRKGVKASQGA-----GHL 53
             +T N    F   +FPYY   D +    W+NS+RHNLS+N  F K  +  Q       G+ 
Sbjct:    42 MTLNQIYKFIEAKFPYYRDADAKRKQGWQNSIRHNLSLNDCFVKKARDGQSCANDRKGNY 101

Query:    54 WNL-SDMEPVEDASKSNWVSIKVTGVKRTGW 83
             W + +D  P  D        +K  G+ + G+
Sbjct:   102 WQMVADNAPQFDNGNFKRRRVKRLGIGKMGY 132


>UNIPROTKB|Q10924 [details] [associations]
            symbol:fkh-6 "Protein FKH-6" species:6239 "Caenorhabditis
            elegans" [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0009790 "embryo
            development" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0002009 GO:GO:0006898 GO:GO:0018991
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008584 GO:GO:0008301 GO:GO:0009790
            GO:GO:0040035 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0040002 GO:GO:0051090 eggNOG:COG5025 HSSP:Q99958
            GO:GO:0019100 GeneTree:ENSGT00700000104094 EMBL:FO080154 PIR:T15311
            RefSeq:NP_494775.1 UniGene:Cel.16060 ProteinModelPortal:Q10924
            SMR:Q10924 EnsemblMetazoa:B0286.5 GeneID:181907
            KEGG:cel:CELE_B0286.5 UCSC:B0286.5 CTD:181907 WormBase:B0286.5
            HOGENOM:HOG000017226 InParanoid:Q10924 OMA:GQSCAND NextBio:915754
            Uniprot:Q10924
        Length = 323

 Score = 104 (41.7 bits), Expect = 3.8e-05, P = 3.8e-05
 Identities = 28/91 (30%), Positives = 42/91 (46%)

Query:     3 LTANLRLFFHRERFPYYNQNDDR----WKNSVRHNLSINPHFRKGVKASQGA-----GHL 53
             +T N    F   +FPYY   D +    W+NS+RHNLS+N  F K  +  Q       G+ 
Sbjct:    42 MTLNQIYKFIEAKFPYYRDADAKRKQGWQNSIRHNLSLNDCFVKKARDGQSCANDRKGNY 101

Query:    54 WNL-SDMEPVEDASKSNWVSIKVTGVKRTGW 83
             W + +D  P  D        +K  G+ + G+
Sbjct:   102 WQMVADNAPQFDNGNFKRRRVKRLGIGKMGY 132

WARNING:  HSPs involving 148 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.133   0.435    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      128       128   0.00091  102 3  11 22  0.37    31
                                                     29  0.41    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  398
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  165 KB (2097 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.32u 0.07s 12.39t   Elapsed:  00:00:07
  Total cpu time:  12.35u 0.07s 12.42t   Elapsed:  00:00:08
  Start:  Thu Aug 15 10:49:20 2013   End:  Thu Aug 15 10:49:28 2013
WARNINGS ISSUED:  2

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