Query psy15417
Match_columns 176
No_of_seqs 115 out of 1272
Neff 10.4
Searched_HMMs 29240
Date Fri Aug 16 20:29:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15417.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15417hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1got_B GT-beta; complex (GTP-b 100.0 6.9E-36 2.4E-40 224.4 22.6 162 15-176 179-340 (340)
2 4gqb_B Methylosome protein 50; 100.0 2.4E-35 8.1E-40 222.3 21.9 161 16-176 123-286 (344)
3 2pbi_B Guanine nucleotide-bind 100.0 3.2E-34 1.1E-38 216.6 22.5 162 15-176 191-354 (354)
4 2ynn_A Coatomer subunit beta'; 100.0 4.3E-34 1.5E-38 211.6 22.2 160 15-176 8-169 (304)
5 3ow8_A WD repeat-containing pr 100.0 3.6E-33 1.2E-37 208.4 23.3 159 16-176 160-318 (321)
6 2ynn_A Coatomer subunit beta'; 100.0 4.6E-33 1.6E-37 206.0 22.3 161 15-176 92-256 (304)
7 1vyh_C Platelet-activating fac 100.0 4E-33 1.4E-37 214.3 21.5 160 15-176 103-262 (410)
8 3frx_A Guanine nucleotide-bind 100.0 3.2E-32 1.1E-36 202.9 23.3 159 15-176 60-224 (319)
9 4g56_B MGC81050 protein; prote 100.0 1.1E-32 3.7E-37 208.5 20.8 162 15-176 134-298 (357)
10 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.1E-32 1E-36 205.0 22.7 161 16-176 57-222 (345)
11 4ery_A WD repeat-containing pr 100.0 7.8E-32 2.7E-36 199.4 24.0 160 15-176 18-177 (312)
12 2xzm_R RACK1; ribosome, transl 100.0 3.3E-32 1.1E-36 204.4 22.3 161 15-176 71-241 (343)
13 3ow8_A WD repeat-containing pr 100.0 2.1E-32 7.3E-37 204.2 20.3 160 15-176 75-234 (321)
14 3iz6_a 40S ribosomal protein R 100.0 1.4E-32 4.9E-37 209.2 19.5 160 17-176 202-372 (380)
15 1vyh_C Platelet-activating fac 100.0 8.1E-32 2.8E-36 207.0 23.7 160 15-176 187-366 (410)
16 2pm7_B Protein transport prote 100.0 6.7E-32 2.3E-36 199.2 21.3 162 15-176 48-235 (297)
17 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.4E-31 4.8E-36 201.3 22.1 162 15-176 10-178 (345)
18 2hes_X YDR267CP; beta-propelle 100.0 2.2E-31 7.4E-36 199.2 22.8 159 18-176 56-227 (330)
19 2pm7_B Protein transport prote 100.0 1.7E-31 5.7E-36 197.1 21.9 162 15-176 4-186 (297)
20 1got_B GT-beta; complex (GTP-b 100.0 4.9E-31 1.7E-35 197.9 23.2 161 15-176 50-212 (340)
21 1nr0_A Actin interacting prote 100.0 5.1E-31 1.7E-35 211.7 23.3 162 15-176 142-352 (611)
22 2pbi_B Guanine nucleotide-bind 100.0 1.4E-30 4.8E-35 196.7 23.9 159 16-176 60-268 (354)
23 2hes_X YDR267CP; beta-propelle 100.0 2E-30 6.9E-35 194.0 23.8 160 15-176 9-181 (330)
24 3iz6_a 40S ribosomal protein R 100.0 3.6E-31 1.2E-35 201.5 20.0 162 15-176 61-277 (380)
25 1erj_A Transcriptional repress 100.0 2.1E-30 7.3E-35 198.0 24.0 155 19-176 122-284 (393)
26 4gqb_B Methylosome protein 50; 100.0 6.6E-31 2.3E-35 198.1 20.8 169 3-176 154-328 (344)
27 2xzm_R RACK1; ribosome, transl 100.0 2.5E-30 8.5E-35 194.2 21.9 160 15-176 16-200 (343)
28 3bg1_A Protein SEC13 homolog; 100.0 1.5E-31 5.2E-36 198.9 15.1 162 15-176 8-195 (316)
29 3frx_A Guanine nucleotide-bind 100.0 3.7E-30 1.3E-34 191.7 22.1 159 15-176 12-182 (319)
30 4ery_A WD repeat-containing pr 100.0 9.1E-30 3.1E-34 188.3 24.0 159 16-176 61-220 (312)
31 4h5i_A Guanine nucleotide-exch 100.0 5.3E-30 1.8E-34 194.3 23.2 158 17-176 130-340 (365)
32 1nr0_A Actin interacting prote 100.0 3.2E-30 1.1E-34 207.1 23.1 160 15-176 54-267 (611)
33 3dm0_A Maltose-binding peripla 100.0 2.6E-30 8.8E-35 210.1 21.4 162 15-176 425-589 (694)
34 2ymu_A WD-40 repeat protein; u 100.0 6.7E-30 2.3E-34 202.7 22.5 157 15-176 421-577 (577)
35 3f3f_A Nucleoporin SEH1; struc 100.0 1.4E-29 4.8E-34 187.7 22.6 162 15-176 6-246 (351)
36 3zwl_B Eukaryotic translation 100.0 2.1E-29 7.1E-34 188.8 23.1 167 10-176 22-246 (369)
37 4ggc_A P55CDC, cell division c 100.0 9.9E-30 3.4E-34 187.6 21.0 175 2-176 49-312 (318)
38 4g56_B MGC81050 protein; prote 100.0 4.3E-30 1.5E-34 194.2 19.1 159 15-176 176-340 (357)
39 1erj_A Transcriptional repress 100.0 1.4E-29 4.8E-34 193.5 21.8 161 15-176 160-338 (393)
40 3bg1_A Protein SEC13 homolog; 100.0 3.7E-31 1.3E-35 196.8 12.7 162 15-176 52-244 (316)
41 3vl1_A 26S proteasome regulato 100.0 4.6E-30 1.6E-34 196.4 18.8 161 16-176 135-319 (420)
42 4e54_B DNA damage-binding prot 100.0 2.9E-30 9.8E-35 199.6 17.8 160 16-176 115-279 (435)
43 3dwl_C Actin-related protein 2 100.0 1.6E-30 5.4E-35 196.6 15.2 160 15-176 50-233 (377)
44 2j04_B YDR362CP, TAU91; beta p 100.0 1.4E-30 4.8E-35 206.0 15.2 160 15-176 261-425 (524)
45 2aq5_A Coronin-1A; WD40 repeat 100.0 2E-29 6.7E-34 192.7 20.9 162 15-176 76-251 (402)
46 2w18_A PALB2, fancn, partner a 100.0 6.6E-30 2.2E-34 190.5 17.6 157 18-176 176-354 (356)
47 3f3f_A Nucleoporin SEH1; struc 100.0 2.2E-29 7.5E-34 186.7 20.5 161 16-176 53-334 (351)
48 4aow_A Guanine nucleotide-bind 100.0 9.8E-29 3.4E-33 183.7 23.9 162 15-176 33-243 (340)
49 3ei3_B DNA damage-binding prot 100.0 3.7E-29 1.3E-33 189.7 21.5 161 15-176 68-233 (383)
50 3jrp_A Fusion protein of prote 100.0 3.1E-29 1.1E-33 188.6 20.8 162 15-176 6-188 (379)
51 4gga_A P55CDC, cell division c 100.0 3.9E-29 1.3E-33 192.3 21.1 175 2-176 129-392 (420)
52 3dwl_C Actin-related protein 2 100.0 1.2E-30 3.9E-35 197.3 11.7 161 16-176 7-174 (377)
53 4e54_B DNA damage-binding prot 100.0 9E-30 3.1E-34 196.8 16.1 171 3-176 147-324 (435)
54 1k8k_C P40, ARP2/3 complex 41 100.0 7.4E-29 2.5E-33 186.5 20.1 161 16-176 4-170 (372)
55 3jrp_A Fusion protein of prote 100.0 5.5E-29 1.9E-33 187.3 19.2 162 15-176 50-237 (379)
56 2ymu_A WD-40 repeat protein; u 100.0 1.8E-28 6E-33 194.5 22.6 157 15-176 380-536 (577)
57 1gxr_A ESG1, transducin-like e 100.0 4.6E-28 1.6E-32 179.6 22.5 158 15-176 136-293 (337)
58 3sfz_A APAF-1, apoptotic pepti 100.0 4.7E-28 1.6E-32 206.8 24.7 162 13-176 608-771 (1249)
59 4aow_A Guanine nucleotide-bind 100.0 1.6E-27 5.5E-32 177.2 24.5 158 15-176 166-334 (340)
60 1gxr_A ESG1, transducin-like e 100.0 3.9E-28 1.3E-32 180.0 20.5 159 17-176 48-211 (337)
61 1sq9_A Antiviral protein SKI8; 100.0 4.2E-28 1.4E-32 184.1 20.7 159 17-176 183-392 (397)
62 1k8k_C P40, ARP2/3 complex 41 100.0 5.2E-28 1.8E-32 181.8 20.4 162 15-176 47-230 (372)
63 3mmy_A MRNA export factor; mRN 100.0 9.2E-28 3.2E-32 179.7 21.6 122 15-139 34-162 (368)
64 3mkq_A Coatomer beta'-subunit; 100.0 5.8E-28 2E-32 198.2 21.0 160 15-176 8-169 (814)
65 3dm0_A Maltose-binding peripla 100.0 1.4E-27 4.7E-32 194.0 22.5 160 15-176 377-547 (694)
66 3gre_A Serine/threonine-protei 100.0 1.1E-27 3.8E-32 184.4 19.4 159 17-176 60-242 (437)
67 3ei3_B DNA damage-binding prot 100.0 1.6E-27 5.6E-32 180.6 20.1 168 4-176 102-279 (383)
68 3zwl_B Eukaryotic translation 100.0 7.8E-27 2.7E-31 174.7 23.4 158 16-176 169-343 (369)
69 3dw8_B Serine/threonine-protei 100.0 1.2E-27 4.1E-32 184.1 19.3 158 18-176 26-255 (447)
70 3v7d_B Cell division control p 100.0 2.6E-27 9.1E-32 183.6 21.3 159 15-176 157-338 (464)
71 2aq5_A Coronin-1A; WD40 repeat 100.0 2.3E-27 8E-32 181.2 20.6 162 15-176 126-296 (402)
72 1r5m_A SIR4-interacting protei 100.0 2.3E-27 7.7E-32 180.7 20.2 159 15-176 242-422 (425)
73 3mmy_A MRNA export factor; mRN 100.0 1.5E-27 5.2E-32 178.6 18.6 160 15-175 81-342 (368)
74 3lrv_A PRE-mRNA-splicing facto 100.0 1.6E-27 5.5E-32 178.8 18.7 158 17-176 122-289 (343)
75 2pm9_A Protein WEB1, protein t 100.0 2.7E-27 9.1E-32 180.5 19.5 160 16-176 161-334 (416)
76 4aez_A CDC20, WD repeat-contai 100.0 5.6E-27 1.9E-31 179.2 21.3 159 15-176 212-377 (401)
77 3k26_A Polycomb protein EED; W 100.0 6.1E-27 2.1E-31 175.3 20.9 159 16-176 14-189 (366)
78 3k26_A Polycomb protein EED; W 100.0 1.3E-27 4.4E-32 179.0 17.2 157 18-176 67-257 (366)
79 3jro_A Fusion protein of prote 100.0 1.3E-27 4.5E-32 196.0 18.6 162 15-176 4-186 (753)
80 2oaj_A Protein SNI1; WD40 repe 100.0 5.9E-28 2E-32 201.4 16.7 162 14-176 429-658 (902)
81 4a11_B DNA excision repair pro 100.0 4.9E-27 1.7E-31 178.1 20.1 159 15-176 38-215 (408)
82 3jro_A Fusion protein of prote 100.0 1.5E-27 5.1E-32 195.7 18.3 162 15-176 48-235 (753)
83 3gre_A Serine/threonine-protei 100.0 6.2E-28 2.1E-32 185.8 14.7 157 19-176 213-437 (437)
84 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.7E-27 9.3E-32 183.5 17.9 160 16-176 98-268 (450)
85 3vl1_A 26S proteasome regulato 100.0 3E-27 1E-31 180.8 17.8 157 17-176 95-275 (420)
86 2pm9_A Protein WEB1, protein t 100.0 4.2E-27 1.4E-31 179.5 18.1 161 16-176 63-246 (416)
87 2xyi_A Probable histone-bindin 100.0 1.1E-26 3.9E-31 179.2 19.6 162 13-176 174-350 (430)
88 1r5m_A SIR4-interacting protei 100.0 3.9E-26 1.3E-30 173.9 22.2 157 18-176 106-316 (425)
89 4aez_A CDC20, WD repeat-contai 100.0 3E-26 1E-30 175.2 21.4 155 18-176 132-290 (401)
90 3dw8_B Serine/threonine-protei 100.0 9.7E-27 3.3E-31 179.1 18.1 154 21-176 94-312 (447)
91 3i2n_A WD repeat-containing pr 100.0 1.1E-26 3.6E-31 173.7 17.8 159 15-176 106-288 (357)
92 1sq9_A Antiviral protein SKI8; 99.9 3.7E-27 1.3E-31 178.9 15.2 161 15-176 57-264 (397)
93 3mkq_A Coatomer beta'-subunit; 99.9 2.7E-26 9.2E-31 188.4 20.6 161 15-176 92-256 (814)
94 2xyi_A Probable histone-bindin 99.9 7.7E-26 2.6E-30 174.6 21.7 160 15-176 226-407 (430)
95 3lrv_A PRE-mRNA-splicing facto 99.9 7.1E-27 2.4E-31 175.3 15.4 152 20-176 76-241 (343)
96 2oaj_A Protein SNI1; WD40 repe 99.9 2.2E-26 7.5E-31 192.0 19.6 155 16-176 13-179 (902)
97 2j04_B YDR362CP, TAU91; beta p 99.9 1.1E-26 3.6E-31 183.8 16.8 158 16-176 203-383 (524)
98 3odt_A Protein DOA1; ubiquitin 99.9 9.5E-26 3.2E-30 165.7 20.2 157 15-176 13-171 (313)
99 4gq1_A NUP37; propeller, trans 99.9 5E-27 1.7E-31 179.5 13.8 162 15-176 131-345 (393)
100 3odt_A Protein DOA1; ubiquitin 99.9 2.3E-25 7.9E-30 163.6 21.8 154 16-176 138-293 (313)
101 3i2n_A WD repeat-containing pr 99.9 4.7E-26 1.6E-30 170.1 18.4 159 17-176 62-240 (357)
102 2j04_A TAU60, YPL007P, hypothe 99.9 6.8E-26 2.3E-30 178.4 18.8 151 18-176 83-251 (588)
103 1yfq_A Cell cycle arrest prote 99.9 3.3E-26 1.1E-30 170.3 16.3 158 15-176 94-279 (342)
104 3vu4_A KMHSV2; beta-propeller 99.9 2.5E-25 8.5E-30 168.0 20.5 160 16-176 15-268 (355)
105 1pgu_A Actin interacting prote 99.9 1.4E-25 4.7E-30 178.5 20.1 158 15-176 58-235 (615)
106 1yfq_A Cell cycle arrest prote 99.9 5.4E-26 1.8E-30 169.2 16.3 156 16-176 7-176 (342)
107 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.6E-25 5.4E-30 173.6 19.4 157 18-176 147-336 (450)
108 3sfz_A APAF-1, apoptotic pepti 99.9 1.6E-25 5.5E-30 191.2 21.0 162 15-176 694-910 (1249)
109 1pgu_A Actin interacting prote 99.9 2.5E-25 8.6E-30 177.0 19.6 154 19-176 445-611 (615)
110 3v7d_B Cell division control p 99.9 6.1E-25 2.1E-29 170.3 20.9 156 15-176 198-378 (464)
111 1p22_A F-BOX/WD-repeat protein 99.9 7E-25 2.4E-29 169.2 20.6 154 15-176 168-322 (435)
112 4a11_B DNA excision repair pro 99.9 2E-24 7E-29 163.7 22.7 157 17-176 96-273 (408)
113 4gq1_A NUP37; propeller, trans 99.9 8.2E-26 2.8E-30 172.7 14.7 156 18-176 87-283 (393)
114 2ovr_B FBW7, F-BOX/WD repeat p 99.9 4.2E-24 1.4E-28 165.1 21.4 152 15-176 154-305 (445)
115 1p22_A F-BOX/WD-repeat protein 99.9 6.2E-24 2.1E-28 163.9 21.5 151 16-176 129-282 (435)
116 2ovr_B FBW7, F-BOX/WD repeat p 99.9 6.4E-24 2.2E-28 164.1 20.5 153 14-176 112-265 (445)
117 3vu4_A KMHSV2; beta-propeller 99.9 1.5E-23 5.1E-28 158.2 20.7 151 24-176 141-333 (355)
118 4ggc_A P55CDC, cell division c 99.9 1.5E-23 5.3E-28 154.3 19.7 149 22-176 27-178 (318)
119 2j04_A TAU60, YPL007P, hypothe 99.9 5.7E-24 2E-28 167.5 18.3 148 22-176 131-294 (588)
120 2w18_A PALB2, fancn, partner a 99.9 6.3E-24 2.1E-28 158.4 17.4 156 19-176 110-311 (356)
121 4gga_A P55CDC, cell division c 99.9 2.4E-22 8.2E-27 154.5 21.0 149 22-176 107-258 (420)
122 2oit_A Nucleoporin 214KDA; NH2 99.9 4.3E-23 1.5E-27 159.9 16.4 155 19-176 91-275 (434)
123 1l0q_A Surface layer protein; 99.9 1.4E-21 4.9E-26 148.0 21.6 154 17-176 29-186 (391)
124 4h5i_A Guanine nucleotide-exch 99.9 2.1E-22 7.1E-27 152.6 14.6 122 15-137 214-343 (365)
125 3bws_A Protein LP49; two-domai 99.9 2.8E-21 9.7E-26 148.2 19.9 157 16-176 165-331 (433)
126 1l0q_A Surface layer protein; 99.9 1.7E-20 5.9E-25 142.1 23.0 153 19-176 114-272 (391)
127 2oit_A Nucleoporin 214KDA; NH2 99.9 2E-22 6.9E-27 156.1 12.2 156 19-176 35-220 (434)
128 3bws_A Protein LP49; two-domai 99.9 7.8E-21 2.7E-25 145.8 17.2 153 21-176 123-289 (433)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 8E-20 2.8E-24 140.6 20.6 157 15-176 173-341 (415)
130 2hqs_A Protein TOLB; TOLB, PAL 99.8 1.8E-18 6.3E-23 133.0 19.4 155 16-176 218-384 (415)
131 2ojh_A Uncharacterized protein 99.8 7.2E-18 2.5E-22 122.1 16.8 156 16-176 37-201 (297)
132 1ri6_A Putative isomerase YBHE 99.8 2.3E-17 7.9E-22 122.3 17.5 158 18-176 35-206 (343)
133 2ecf_A Dipeptidyl peptidase IV 99.8 1.9E-17 6.4E-22 135.1 16.7 146 20-170 36-230 (741)
134 1nir_A Nitrite reductase; hemo 99.8 1.5E-16 5.3E-21 126.3 19.8 152 23-176 181-352 (543)
135 1xfd_A DIP, dipeptidyl aminope 99.7 2.2E-18 7.4E-23 140.1 8.5 147 22-170 18-194 (723)
136 3u4y_A Uncharacterized protein 99.7 3.3E-16 1.1E-20 116.0 19.4 154 19-176 39-204 (331)
137 1pby_B Quinohemoprotein amine 99.7 1E-16 3.6E-21 118.4 15.9 149 22-176 83-307 (337)
138 1nir_A Nitrite reductase; hemo 99.7 2.1E-16 7.2E-21 125.5 18.3 145 28-176 145-308 (543)
139 3vgz_A Uncharacterized protein 99.7 8.3E-16 2.9E-20 114.5 20.0 152 23-176 143-300 (353)
140 3hfq_A Uncharacterized protein 99.7 2.7E-15 9.1E-20 112.1 21.6 155 21-175 141-313 (347)
141 3vgz_A Uncharacterized protein 99.7 9.3E-16 3.2E-20 114.2 19.0 153 22-176 90-259 (353)
142 1xfd_A DIP, dipeptidyl aminope 99.7 6.1E-17 2.1E-21 131.6 13.3 153 22-176 62-286 (723)
143 1ri6_A Putative isomerase YBHE 99.7 1.2E-15 4.2E-20 112.9 19.3 155 21-176 129-305 (343)
144 2ecf_A Dipeptidyl peptidase IV 99.7 1.5E-16 5E-21 129.8 15.2 159 15-175 146-363 (741)
145 2ojh_A Uncharacterized protein 99.7 2.5E-16 8.6E-21 113.9 14.6 152 20-176 84-255 (297)
146 3scy_A Hypothetical bacterial 99.7 4.3E-15 1.5E-19 111.6 21.4 155 20-175 154-333 (361)
147 3hfq_A Uncharacterized protein 99.7 8.5E-16 2.9E-20 114.8 17.4 157 19-176 38-215 (347)
148 1k32_A Tricorn protease; prote 99.7 6E-16 2.1E-20 130.9 17.5 156 16-176 332-499 (1045)
149 2z3z_A Dipeptidyl aminopeptida 99.7 1.1E-16 3.7E-21 130.0 11.4 160 16-176 116-339 (706)
150 1k32_A Tricorn protease; prote 99.7 2.3E-16 7.8E-21 133.5 13.6 152 19-176 294-458 (1045)
151 3u4y_A Uncharacterized protein 99.7 6.5E-15 2.2E-19 109.0 19.2 146 27-176 4-157 (331)
152 2z3z_A Dipeptidyl aminopeptida 99.7 9.1E-16 3.1E-20 124.6 15.3 152 21-176 82-290 (706)
153 1jmx_B Amine dehydrogenase; ox 99.7 1.1E-15 3.7E-20 113.6 13.7 148 22-176 93-322 (349)
154 3o4h_A Acylamino-acid-releasin 99.7 7.2E-16 2.5E-20 122.8 13.4 145 24-176 113-273 (582)
155 1pby_B Quinohemoprotein amine 99.7 4.3E-15 1.5E-19 109.7 16.6 141 33-176 2-160 (337)
156 1jmx_B Amine dehydrogenase; ox 99.7 1.9E-15 6.5E-20 112.3 14.5 147 26-176 5-172 (349)
157 1z68_A Fibroblast activation p 99.7 4.9E-16 1.7E-20 126.5 10.8 140 25-169 20-189 (719)
158 1q7f_A NHL, brain tumor CG1071 99.6 8.2E-14 2.8E-18 101.4 20.9 154 19-176 119-277 (286)
159 1jof_A Carboxy-CIS,CIS-muconat 99.6 2.9E-14 9.8E-19 107.6 18.4 158 19-176 143-338 (365)
160 3o4h_A Acylamino-acid-releasin 99.6 2.4E-15 8.3E-20 119.8 13.1 143 24-176 153-312 (582)
161 1z68_A Fibroblast activation p 99.6 1.1E-15 3.7E-20 124.4 9.5 150 23-176 62-284 (719)
162 3fvz_A Peptidyl-glycine alpha- 99.6 3.4E-13 1.2E-17 100.5 21.0 156 20-176 23-224 (329)
163 1jof_A Carboxy-CIS,CIS-muconat 99.6 5.9E-14 2E-18 105.9 16.2 154 21-176 40-221 (365)
164 3fvz_A Peptidyl-glycine alpha- 99.6 8.5E-14 2.9E-18 103.8 16.9 158 18-176 140-319 (329)
165 3scy_A Hypothetical bacterial 99.6 2.2E-13 7.6E-18 102.2 18.4 156 19-176 48-239 (361)
166 3pe7_A Oligogalacturonate lyas 99.6 1.4E-13 4.7E-18 104.0 17.0 153 16-169 26-209 (388)
167 3azo_A Aminopeptidase; POP fam 99.6 8.6E-14 3E-18 112.2 16.5 153 19-175 128-319 (662)
168 4a5s_A Dipeptidyl peptidase 4 99.6 1.2E-14 4E-19 119.1 11.3 149 21-175 17-198 (740)
169 1q7f_A NHL, brain tumor CG1071 99.6 1.6E-12 5.6E-17 94.5 21.4 156 18-176 74-235 (286)
170 2dg1_A DRP35, lactonase; beta 99.5 2E-12 6.7E-17 95.9 19.9 159 17-176 41-210 (333)
171 1xip_A Nucleoporin NUP159; bet 99.5 1.6E-12 5.3E-17 99.0 17.7 133 19-165 87-230 (388)
172 3e5z_A Putative gluconolactona 99.5 3.3E-12 1.1E-16 93.4 18.7 156 17-176 24-199 (296)
173 3no2_A Uncharacterized protein 99.5 1.9E-12 6.5E-17 94.5 16.6 142 30-176 3-152 (276)
174 4a5s_A Dipeptidyl peptidase 4 99.5 4E-13 1.4E-17 110.1 13.7 151 24-176 65-291 (740)
175 2oiz_A Aromatic amine dehydrog 99.5 9.7E-13 3.3E-17 99.4 14.0 153 19-176 50-331 (361)
176 3azo_A Aminopeptidase; POP fam 99.5 5.7E-13 2E-17 107.4 13.3 147 25-175 81-268 (662)
177 3pe7_A Oligogalacturonate lyas 99.5 6.5E-12 2.2E-16 94.7 17.0 155 18-176 78-270 (388)
178 1xip_A Nucleoporin NUP159; bet 99.4 2.2E-12 7.6E-17 98.2 13.5 138 22-176 39-188 (388)
179 1rwi_B Serine/threonine-protei 99.4 2.5E-11 8.5E-16 87.2 18.3 154 21-176 108-261 (270)
180 2xdw_A Prolyl endopeptidase; a 99.4 7.4E-12 2.5E-16 102.1 16.7 157 18-176 122-317 (710)
181 2bkl_A Prolyl endopeptidase; m 99.4 6.8E-12 2.3E-16 102.2 14.7 155 18-176 118-301 (695)
182 3no2_A Uncharacterized protein 99.4 4.3E-11 1.5E-15 87.3 17.4 150 21-176 37-192 (276)
183 2gop_A Trilobed protease; beta 99.4 3.1E-11 1.1E-15 89.8 15.7 145 21-176 59-250 (347)
184 1rwi_B Serine/threonine-protei 99.4 1E-10 3.5E-15 84.0 17.4 152 21-176 67-219 (270)
185 3e5z_A Putative gluconolactona 99.4 1.8E-10 6.1E-15 84.1 18.3 154 17-176 65-243 (296)
186 2z2n_A Virginiamycin B lyase; 99.4 1.2E-09 4E-14 79.2 22.5 157 16-176 10-168 (299)
187 2dg1_A DRP35, lactonase; beta 99.3 1.1E-09 3.7E-14 81.1 22.5 155 18-176 84-260 (333)
188 2gop_A Trilobed protease; beta 99.3 1.2E-10 4.1E-15 86.6 16.7 140 23-175 106-288 (347)
189 2z2n_A Virginiamycin B lyase; 99.3 3.5E-09 1.2E-13 76.7 22.4 154 19-176 55-210 (299)
190 3c5m_A Oligogalacturonate lyas 99.3 1.9E-11 6.5E-16 92.1 10.4 149 25-176 85-270 (396)
191 3c5m_A Oligogalacturonate lyas 99.3 1.6E-10 5.4E-15 87.1 14.5 151 18-175 185-378 (396)
192 2oiz_A Aromatic amine dehydrog 99.2 2.3E-10 8E-15 86.3 14.2 132 40-175 29-178 (361)
193 3dsm_A Uncharacterized protein 99.2 8.1E-10 2.8E-14 82.2 16.8 150 22-176 132-299 (328)
194 3dsm_A Uncharacterized protein 99.2 1.9E-09 6.5E-14 80.2 18.5 150 21-176 84-250 (328)
195 2qc5_A Streptogramin B lactona 99.2 1.6E-08 5.3E-13 73.3 22.5 157 16-176 15-173 (300)
196 1yr2_A Prolyl oligopeptidase; 99.2 2.2E-10 7.7E-15 93.9 14.0 156 18-176 160-347 (741)
197 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 2E-09 6.9E-14 78.7 17.7 154 21-176 117-296 (314)
198 2qc5_A Streptogramin B lactona 99.2 2.7E-08 9.1E-13 72.0 22.6 154 19-176 102-257 (300)
199 2bkl_A Prolyl endopeptidase; m 99.2 2.8E-09 9.5E-14 86.8 18.4 147 24-175 171-345 (695)
200 1qks_A Cytochrome CD1 nitrite 99.2 1.4E-08 4.8E-13 81.0 21.0 153 22-176 198-370 (567)
201 2xdw_A Prolyl endopeptidase; a 99.1 1E-08 3.4E-13 83.7 19.9 156 19-176 231-411 (710)
202 1qks_A Cytochrome CD1 nitrite 99.1 1.3E-08 4.5E-13 81.2 19.3 143 30-176 165-326 (567)
203 3dr2_A Exported gluconolactona 99.1 1.2E-08 4E-13 75.0 17.5 155 17-176 41-221 (305)
204 3hrp_A Uncharacterized protein 99.1 1.3E-08 4.4E-13 78.1 18.2 153 21-176 131-295 (409)
205 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 4.8E-08 1.6E-12 71.4 20.5 152 19-176 69-253 (314)
206 2hz6_A Endoplasmic reticulum t 99.1 1.6E-11 5.4E-16 93.1 1.2 138 31-176 8-146 (369)
207 2mad_H Methylamine dehydrogena 99.1 6.3E-08 2.1E-12 73.5 19.9 150 25-176 70-347 (373)
208 3g4e_A Regucalcin; six bladed 99.0 1.3E-07 4.3E-12 69.2 20.2 153 20-176 53-226 (297)
209 3hrp_A Uncharacterized protein 99.0 8.7E-08 3E-12 73.5 19.8 154 20-175 218-406 (409)
210 3g4e_A Regucalcin; six bladed 99.0 4.7E-08 1.6E-12 71.5 17.7 143 21-164 98-257 (297)
211 3sjl_D Methylamine dehydrogena 99.0 2.8E-08 9.7E-13 75.5 15.4 117 27-145 39-177 (386)
212 2qe8_A Uncharacterized protein 99.0 1.4E-08 5E-13 75.8 13.4 159 18-176 64-275 (343)
213 2qe8_A Uncharacterized protein 99.0 7.4E-08 2.5E-12 72.0 17.1 149 21-170 17-216 (343)
214 3iuj_A Prolyl endopeptidase; h 99.0 2E-08 6.8E-13 81.9 14.7 143 18-164 126-295 (693)
215 2ghs_A AGR_C_1268P; regucalcin 98.9 1.1E-06 3.6E-11 65.2 21.8 152 20-176 89-257 (326)
216 1yr2_A Prolyl oligopeptidase; 98.9 1.2E-07 4.2E-12 77.7 17.3 146 24-175 212-389 (741)
217 2mad_H Methylamine dehydrogena 98.9 4.6E-07 1.6E-11 68.7 19.1 141 28-175 28-192 (373)
218 2ghs_A AGR_C_1268P; regucalcin 98.9 6.1E-07 2.1E-11 66.6 19.2 141 21-165 134-288 (326)
219 3dr2_A Exported gluconolactona 98.8 3.6E-07 1.2E-11 67.0 14.4 146 22-174 132-302 (305)
220 2hz6_A Endoplasmic reticulum t 98.7 2E-10 6.8E-15 87.0 -4.1 144 25-176 42-189 (369)
221 1mda_H Methylamine dehydrogena 98.7 2.5E-07 8.7E-12 70.0 12.0 151 25-176 69-343 (368)
222 3c75_H MADH, methylamine dehyd 98.7 2.2E-06 7.5E-11 66.1 16.6 140 30-171 82-250 (426)
223 1yiq_A Quinohemoprotein alcoho 98.7 1.9E-06 6.6E-11 70.3 17.0 151 25-176 239-502 (689)
224 3sjl_D Methylamine dehydrogena 98.6 9.8E-07 3.4E-11 67.1 13.8 146 25-176 82-253 (386)
225 2iwa_A Glutamine cyclotransfer 98.6 1.8E-05 6.2E-10 57.2 18.2 148 22-176 22-178 (266)
226 2iwa_A Glutamine cyclotransfer 98.6 1.2E-05 4E-10 58.2 17.1 146 25-174 70-232 (266)
227 2ece_A 462AA long hypothetical 98.6 5.5E-06 1.9E-10 64.0 15.9 151 25-176 142-349 (462)
228 1kb0_A Quinohemoprotein alcoho 98.6 2.2E-06 7.5E-11 69.8 14.5 151 25-176 247-504 (677)
229 1npe_A Nidogen, entactin; glyc 98.6 6.9E-05 2.3E-09 53.6 21.0 154 21-176 36-195 (267)
230 3c75_H MADH, methylamine dehyd 98.5 2.3E-06 7.8E-11 66.0 12.7 78 25-102 122-218 (426)
231 3nol_A Glutamine cyclotransfer 98.5 5.9E-05 2E-09 54.2 18.4 146 23-176 45-198 (262)
232 3nok_A Glutaminyl cyclase; bet 98.5 2.2E-05 7.4E-10 56.6 15.9 144 23-176 57-207 (268)
233 1fwx_A Nitrous oxide reductase 98.5 1.7E-05 5.9E-10 63.2 16.7 150 22-176 135-358 (595)
234 3iuj_A Prolyl endopeptidase; h 98.4 1.1E-05 3.7E-10 65.8 15.6 151 19-176 232-402 (693)
235 1kb0_A Quinohemoprotein alcoho 98.4 4.2E-06 1.5E-10 68.2 13.0 134 27-163 319-534 (677)
236 2p9w_A MAL S 1 allergenic prot 98.4 5E-05 1.7E-09 56.4 16.8 157 20-176 12-212 (334)
237 3tc9_A Hypothetical hydrolase; 98.4 6.7E-05 2.3E-09 57.9 18.1 149 22-175 138-297 (430)
238 3q7m_A Lipoprotein YFGL, BAMB; 98.4 7.6E-05 2.6E-09 56.0 17.6 138 32-176 53-204 (376)
239 2fp8_A Strictosidine synthase; 98.3 8.3E-05 2.8E-09 54.7 17.0 153 21-176 19-213 (322)
240 3nol_A Glutamine cyclotransfer 98.3 9.9E-05 3.4E-09 53.0 16.2 130 33-166 98-243 (262)
241 1yiq_A Quinohemoprotein alcoho 98.3 2.7E-05 9.4E-10 63.5 14.4 128 34-164 321-534 (689)
242 3hxj_A Pyrrolo-quinoline quino 98.3 2.7E-05 9.1E-10 57.0 12.7 135 32-176 107-241 (330)
243 2xe4_A Oligopeptidase B; hydro 98.2 2.7E-05 9.2E-10 64.2 13.5 113 22-138 175-305 (751)
244 3q7m_A Lipoprotein YFGL, BAMB; 98.2 9.8E-05 3.3E-09 55.4 14.7 136 32-176 239-375 (376)
245 3hxj_A Pyrrolo-quinoline quino 98.2 4E-05 1.4E-09 56.1 12.3 143 23-176 139-281 (330)
246 2ece_A 462AA long hypothetical 98.2 9.5E-05 3.2E-09 57.2 14.4 145 30-175 93-285 (462)
247 1mda_H Methylamine dehydrogena 98.2 1.8E-05 6.3E-10 59.8 10.3 93 43-137 47-158 (368)
248 1kv9_A Type II quinohemoprotei 98.2 9.9E-05 3.4E-09 60.0 15.2 151 25-176 234-485 (668)
249 3mbr_X Glutamine cyclotransfer 98.2 0.00075 2.6E-08 48.0 19.8 148 21-176 21-176 (243)
250 1fwx_A Nitrous oxide reductase 98.2 1.4E-05 4.8E-10 63.7 9.8 140 25-166 199-405 (595)
251 3mbr_X Glutamine cyclotransfer 98.2 0.00055 1.9E-08 48.7 17.1 131 32-166 75-222 (243)
252 2fp8_A Strictosidine synthase; 98.1 0.0003 1E-08 51.7 16.1 148 22-175 127-309 (322)
253 3nok_A Glutaminyl cyclase; bet 98.1 0.00072 2.5E-08 48.7 17.3 136 26-166 101-253 (268)
254 4hw6_A Hypothetical protein, I 98.0 0.0011 3.8E-08 51.1 17.5 151 21-175 139-300 (433)
255 3v64_C Agrin; beta propeller, 98.0 0.0025 8.5E-08 47.6 20.1 152 22-175 74-230 (349)
256 3v65_B Low-density lipoprotein 98.0 0.003 1E-07 47.9 19.8 154 21-176 116-274 (386)
257 1npe_A Nidogen, entactin; glyc 97.9 0.003 1E-07 45.0 21.0 152 21-176 79-235 (267)
258 3kya_A Putative phosphatase; s 97.8 0.0053 1.8E-07 48.2 18.8 150 22-175 140-337 (496)
259 1ijq_A LDL receptor, low-densi 97.8 0.0044 1.5E-07 45.5 21.1 153 21-175 30-191 (316)
260 1kv9_A Type II quinohemoprotei 97.8 0.00086 2.9E-08 54.6 14.6 145 32-176 117-330 (668)
261 2ad6_A Methanol dehydrogenase 97.8 0.0012 4E-08 52.8 15.0 149 26-176 240-491 (571)
262 3qqz_A Putative uncharacterize 97.8 0.0044 1.5E-07 44.4 17.9 164 9-175 59-249 (255)
263 1flg_A Protein (quinoprotein e 97.8 0.002 6.8E-08 51.6 15.9 76 25-101 250-363 (582)
264 2ad6_A Methanol dehydrogenase 97.7 0.0012 4.1E-08 52.8 14.2 127 34-163 318-521 (571)
265 3qqz_A Putative uncharacterize 97.7 0.0061 2.1E-07 43.6 19.8 161 15-176 21-201 (255)
266 2xbg_A YCF48-like protein; pho 97.7 0.0079 2.7E-07 44.4 17.2 151 19-175 161-318 (327)
267 1flg_A Protein (quinoprotein e 97.7 0.0016 5.4E-08 52.2 14.2 79 83-164 465-545 (582)
268 4hw6_A Hypothetical protein, I 97.7 0.0054 1.9E-07 47.3 16.5 155 20-176 181-371 (433)
269 2p4o_A Hypothetical protein; p 97.6 0.0085 2.9E-07 43.6 20.8 151 21-176 32-195 (306)
270 2p9w_A MAL S 1 allergenic prot 97.6 0.01 3.5E-07 44.1 16.3 115 22-137 64-215 (334)
271 1w6s_A Methanol dehydrogenase 97.6 0.007 2.4E-07 48.7 16.3 75 26-101 246-350 (599)
272 3v64_C Agrin; beta propeller, 97.6 0.013 4.5E-07 43.7 19.0 149 23-174 118-270 (349)
273 3p5b_L Low density lipoprotein 97.6 0.015 5.1E-07 44.3 21.1 153 21-175 112-273 (400)
274 3m0c_C LDL receptor, low-densi 97.5 0.027 9.3E-07 46.8 21.1 153 21-175 424-585 (791)
275 2p4o_A Hypothetical protein; p 97.5 0.011 3.7E-07 43.0 15.7 135 26-166 122-275 (306)
276 3v65_B Low-density lipoprotein 97.4 0.021 7.2E-07 43.2 18.2 149 24-175 162-314 (386)
277 1k3i_A Galactose oxidase precu 97.4 0.0015 5.2E-08 52.9 10.8 114 25-139 190-325 (656)
278 2xe4_A Oligopeptidase B; hydro 97.4 0.013 4.6E-07 48.2 16.4 150 24-175 224-394 (751)
279 4a2l_A BT_4663, two-component 97.4 0.041 1.4E-06 45.5 19.8 138 20-164 405-558 (795)
280 4a2l_A BT_4663, two-component 97.4 0.041 1.4E-06 45.4 21.2 143 20-166 356-515 (795)
281 3sov_A LRP-6, low-density lipo 97.4 0.023 7.9E-07 41.9 18.1 152 22-175 36-193 (318)
282 1k3i_A Galactose oxidase precu 97.4 0.02 7E-07 46.3 16.8 73 22-94 244-324 (656)
283 1w6s_A Methanol dehydrogenase 97.3 0.0095 3.2E-07 47.9 13.8 141 35-176 124-339 (599)
284 1tl2_A L10, protein (tachylect 97.3 0.0069 2.4E-07 42.5 11.1 141 22-172 42-203 (236)
285 3tc9_A Hypothetical hydrolase; 97.2 0.043 1.5E-06 42.2 19.2 152 23-175 228-426 (430)
286 2ism_A Putative oxidoreductase 97.2 0.039 1.3E-06 41.2 16.6 100 22-124 32-152 (352)
287 3a9g_A Putative uncharacterize 97.2 0.033 1.1E-06 41.7 15.3 102 21-124 29-152 (354)
288 1n7d_A LDL receptor, low-densi 97.0 0.0031 1.1E-07 51.6 8.9 153 22-176 407-568 (699)
289 3das_A Putative oxidoreductase 97.0 0.071 2.4E-06 39.9 17.5 144 21-165 32-218 (347)
290 2g8s_A Glucose/sorbosone dehyd 97.0 0.071 2.4E-06 39.8 15.1 104 21-125 18-148 (353)
291 3amr_A 3-phytase; beta-propell 96.9 0.081 2.8E-06 39.6 16.5 135 33-171 41-202 (355)
292 1cru_A Protein (soluble quinop 96.9 0.099 3.4E-06 40.5 18.9 105 21-125 27-162 (454)
293 3v9f_A Two-component system se 96.9 0.14 4.8E-06 42.1 20.6 152 19-175 405-564 (781)
294 3pbp_A Nucleoporin NUP82; beta 96.9 0.04 1.4E-06 42.4 12.9 111 22-133 67-208 (452)
295 3amr_A 3-phytase; beta-propell 96.8 0.089 3E-06 39.4 14.1 123 21-144 128-271 (355)
296 3sov_A LRP-6, low-density lipo 96.8 0.096 3.3E-06 38.5 19.0 150 23-175 81-234 (318)
297 3v9f_A Two-component system se 96.7 0.19 6.6E-06 41.3 18.8 143 20-168 362-513 (781)
298 1ijq_A LDL receptor, low-densi 96.5 0.14 4.7E-06 37.5 20.3 151 22-175 78-234 (316)
299 3p5b_L Low density lipoprotein 96.5 0.19 6.5E-06 38.1 21.0 152 21-175 159-316 (400)
300 1n7d_A LDL receptor, low-densi 96.4 0.032 1.1E-06 45.7 10.6 150 23-175 455-610 (699)
301 3kya_A Putative phosphatase; s 96.4 0.26 8.9E-06 38.7 18.0 112 21-134 186-338 (496)
302 3s94_A LRP-6, low-density lipo 96.3 0.32 1.1E-05 39.2 19.6 153 21-175 40-198 (619)
303 3sre_A PON1, serum paraoxonase 96.3 0.23 7.9E-06 37.2 16.6 150 24-176 53-249 (355)
304 3pbp_A Nucleoporin NUP82; beta 96.3 0.27 9.2E-06 37.9 18.1 142 29-173 29-206 (452)
305 1tl2_A L10, protein (tachylect 96.3 0.087 3E-06 36.9 10.6 103 64-172 42-156 (236)
306 3s94_A LRP-6, low-density lipo 96.2 0.37 1.3E-05 38.9 20.6 151 21-173 349-504 (619)
307 2xn4_A Kelch-like protein 2; s 96.1 0.23 7.8E-06 35.7 15.5 133 31-170 108-262 (302)
308 2vpj_A Kelch-like protein 12; 96.1 0.24 8.2E-06 35.5 16.2 133 31-170 112-264 (301)
309 4a0p_A LRP6, LRP-6, low-densit 96.1 0.44 1.5E-05 38.5 20.2 152 21-175 37-193 (628)
310 2be1_A Serine/threonine-protei 95.9 0.081 2.8E-06 39.4 9.5 112 33-145 11-138 (339)
311 3ii7_A Kelch-like protein 7; p 95.9 0.31 1.1E-05 35.0 13.2 132 31-169 101-257 (306)
312 3m0c_C LDL receptor, low-densi 95.8 0.65 2.2E-05 38.6 20.4 150 21-173 471-626 (791)
313 2vpj_A Kelch-like protein 12; 95.5 0.42 1.4E-05 34.2 14.7 133 31-169 62-216 (301)
314 3ii7_A Kelch-like protein 7; p 95.5 0.45 1.5E-05 34.2 15.5 133 31-170 55-211 (306)
315 4asc_A Kelch repeat and BTB do 95.4 0.48 1.6E-05 34.3 13.1 132 31-169 98-253 (315)
316 2xn4_A Kelch-like protein 2; s 95.2 0.57 1.9E-05 33.6 14.7 133 31-170 61-215 (302)
317 1zgk_A Kelch-like ECH-associat 95.2 0.59 2E-05 33.7 14.1 133 31-170 121-273 (308)
318 1zgk_A Kelch-like ECH-associat 94.8 0.76 2.6E-05 33.1 13.7 132 31-169 70-225 (308)
319 3sbq_A Nitrous-oxide reductase 94.5 0.46 1.6E-05 38.0 10.3 101 65-166 325-452 (638)
320 2xbg_A YCF48-like protein; pho 94.5 0.98 3.3E-05 33.0 18.8 141 20-168 35-182 (327)
321 2woz_A Kelch repeat and BTB do 94.4 0.99 3.4E-05 32.6 14.3 132 31-169 109-263 (318)
322 2ism_A Putative oxidoreductase 94.3 1.1 3.9E-05 33.2 13.7 100 63-167 31-153 (352)
323 2wg3_C Hedgehog-interacting pr 94.2 1.2 4E-05 34.7 12.0 106 22-127 15-159 (463)
324 1cru_A Protein (soluble quinop 93.4 2.2 7.4E-05 33.0 14.8 105 64-168 28-163 (454)
325 4asc_A Kelch repeat and BTB do 92.9 1.9 6.5E-05 31.0 13.8 135 29-170 43-207 (315)
326 3a9g_A Putative uncharacterize 92.4 2.5 8.6E-05 31.4 13.1 101 63-167 29-153 (354)
327 4a0p_A LRP6, LRP-6, low-densit 92.3 3.8 0.00013 33.1 21.8 149 21-173 389-543 (628)
328 3das_A Putative oxidoreductase 91.8 3.1 0.00011 31.0 15.0 104 63-168 32-159 (347)
329 2zwa_A Leucine carboxyl methyl 91.1 5.4 0.00019 32.5 13.4 107 31-139 451-579 (695)
330 2xzh_A Clathrin heavy chain 1; 90.4 4.4 0.00015 30.3 15.3 150 21-172 152-325 (365)
331 2uvk_A YJHT; unknown function, 90.3 2 6.8E-05 31.5 8.7 49 42-91 168-224 (357)
332 2g8s_A Glucose/sorbosone dehyd 89.9 2.4 8.2E-05 31.4 8.8 101 64-167 19-148 (353)
333 2woz_A Kelch repeat and BTB do 88.5 5.4 0.00018 28.6 13.8 106 29-139 54-186 (318)
334 2zwa_A Leucine carboxyl methyl 87.3 11 0.00037 30.8 13.4 110 30-140 499-638 (695)
335 2uvk_A YJHT; unknown function, 85.9 8.2 0.00028 28.1 14.2 52 31-83 65-128 (357)
336 4gq2_M Nucleoporin NUP120; bet 85.3 2.1 7.3E-05 36.4 6.7 37 22-58 237-273 (950)
337 3zwu_A Alkaline phosphatase PH 85.0 5.2 0.00018 32.1 8.4 58 25-82 480-550 (592)
338 3ei3_A DNA damage-binding prot 83.3 23 0.00077 31.0 19.7 126 44-173 494-630 (1158)
339 1bpo_A Protein (clathrin); cla 82.7 15 0.00052 28.6 17.2 150 21-172 151-324 (494)
340 4gq2_M Nucleoporin NUP120; bet 82.4 2.5 8.4E-05 36.0 5.9 37 64-100 237-273 (950)
341 4fhn_B Nucleoporin NUP120; pro 81.0 8.9 0.0003 33.3 8.9 36 65-100 240-275 (1139)
342 2xzh_A Clathrin heavy chain 1; 79.4 17 0.0006 27.2 10.5 74 21-94 260-333 (365)
343 2wg3_C Hedgehog-interacting pr 79.4 20 0.00068 27.8 13.1 104 64-169 15-159 (463)
344 4a9v_A PHOX; hydrolase, beta-p 78.2 19 0.00066 28.9 9.2 63 21-83 476-551 (592)
345 4fhn_B Nucleoporin NUP120; pro 77.9 2.4 8.3E-05 36.7 4.5 38 22-59 239-276 (1139)
346 3sre_A PON1, serum paraoxonase 77.7 20 0.00067 26.8 19.9 142 22-169 113-287 (355)
347 3ei3_A DNA damage-binding prot 76.9 38 0.0013 29.7 20.2 109 22-134 515-633 (1158)
348 3f7f_A Nucleoporin NUP120; nuc 76.3 6.8 0.00023 32.3 6.4 36 22-59 223-258 (729)
349 3qhy_B Beta-lactamase inhibito 76.0 19 0.00064 25.7 11.7 139 22-175 103-242 (282)
350 3sbq_A Nitrous-oxide reductase 73.3 17 0.00057 29.4 7.7 66 110-176 326-405 (638)
351 1xi4_A Clathrin heavy chain; a 71.5 60 0.0021 29.5 11.5 135 21-157 151-309 (1630)
352 3f7f_A Nucleoporin NUP120; nuc 71.1 8.1 0.00028 31.9 5.6 29 73-101 230-258 (729)
353 1bpo_A Protein (clathrin); cla 70.9 36 0.0012 26.6 11.0 73 21-93 259-331 (494)
354 3qhy_B Beta-lactamase inhibito 67.3 31 0.0011 24.5 11.2 102 22-135 25-127 (282)
355 3ott_A Two-component system se 61.6 65 0.0022 26.2 17.7 145 21-173 472-621 (758)
356 3zwu_A Alkaline phosphatase PH 56.3 77 0.0026 25.5 8.7 57 110-166 479-548 (592)
357 2be1_A Serine/threonine-protei 51.0 46 0.0016 24.6 6.2 66 75-141 11-80 (339)
358 3s25_A Hypothetical 7-bladed b 50.2 68 0.0023 23.0 12.8 125 26-166 58-201 (302)
359 4gz8_A Semaphorin-3A; multi-do 41.6 1.4E+02 0.0047 24.5 8.0 56 33-88 430-495 (667)
360 1s28_A ORF1; type III chaperon 40.4 15 0.00051 23.0 1.8 40 5-45 14-53 (132)
361 4a9v_A PHOX; hydrolase, beta-p 37.8 1.6E+02 0.0055 23.8 9.4 59 108-166 477-548 (592)
362 3s25_A Hypothetical 7-bladed b 31.7 1.4E+02 0.0048 21.3 12.2 102 26-138 109-217 (302)
363 1q47_A Semaphorin 3A; beta pro 30.8 1.9E+02 0.0064 22.6 7.1 56 119-174 422-487 (495)
364 3al9_A Plexin-A2; beta-propell 28.5 2E+02 0.0068 22.8 6.9 70 64-133 401-477 (539)
365 1xi4_A Clathrin heavy chain; a 27.2 2.3E+02 0.0077 26.1 7.4 67 24-90 262-328 (1630)
366 1q47_A Semaphorin 3A; beta pro 27.1 2.2E+02 0.0077 22.2 7.8 56 33-88 422-487 (495)
367 3nvq_A Semaphorin-7A; beta-pro 26.2 2.4E+02 0.0083 22.7 7.0 56 119-174 381-444 (590)
368 3b7f_A Glycosyl hydrolase, BNR 25.9 2E+02 0.0067 21.1 15.0 47 33-80 23-74 (394)
369 3nvq_A Semaphorin-7A; beta-pro 24.3 2.8E+02 0.0096 22.3 7.7 56 33-88 381-444 (590)
370 1olz_A Semaphorin 4D; developm 23.7 3E+02 0.01 22.4 8.4 67 22-88 398-477 (663)
371 3b7f_A Glycosyl hydrolase, BNR 23.4 2.2E+02 0.0075 20.8 15.8 21 21-42 55-77 (394)
372 3ott_A Two-component system se 22.1 3.2E+02 0.011 22.1 21.7 142 21-170 146-299 (758)
373 3q6k_A 43.2 kDa salivary prote 22.1 2.5E+02 0.0087 21.0 17.6 156 21-176 87-303 (381)
374 4gz8_A Semaphorin-3A; multi-do 20.7 3E+02 0.01 22.6 6.6 56 119-174 430-495 (667)
375 3al9_A Plexin-A2; beta-propell 20.3 2.3E+02 0.0079 22.4 5.8 67 22-88 401-476 (539)
No 1
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.9e-36 Score=224.36 Aligned_cols=162 Identities=85% Similarity=1.433 Sum_probs=151.7
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
.+.+|.+.|.+++|+|++.++++|+.|++|++||++++++..++.+|..+|++++|+|++..|++++.|++|++||+++.
T Consensus 179 ~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 179 TFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417 95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 174 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v 174 (176)
+.+..+.+......+.+++|+|++.++++|+.|+.+++||..+.+....+.+|...|.+++|+|++.+|++|+.|++|+|
T Consensus 259 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~i 338 (340)
T 1got_B 259 QELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338 (340)
T ss_dssp EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEE
T ss_pred cEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEe
Confidence 77666655554457899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eC
Q psy15417 175 WN 176 (176)
Q Consensus 175 wd 176 (176)
||
T Consensus 339 Wd 340 (340)
T 1got_B 339 WN 340 (340)
T ss_dssp EC
T ss_pred cC
Confidence 97
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.4e-35 Score=222.35 Aligned_cols=161 Identities=20% Similarity=0.215 Sum_probs=142.4
Q ss_pred cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCC-cEEEEeeCCCcEEEeeCCCC
Q psy15417 16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~~~ 94 (176)
+.||.+.|++++|+|++++|++|+.|++|++||+++++++.++.+|...|++++|+|++ ..|++++.|++|++||++++
T Consensus 123 ~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~ 202 (344)
T 4gqb_B 123 KYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP 202 (344)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSS
T ss_pred ccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeecccccccccccccc
Confidence 56899999999999999999999999999999999999999999999999999999987 57899999999999999988
Q ss_pred CeeeEEeecceEeceEEEEECCC-CcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCC-CEEEEccCCCcE
Q psy15417 95 QELAMYSHDNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG-MAVATGSWDSFL 172 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~tg~~d~~v 172 (176)
+....+....+...+.++.|+|+ +.++++|+.|++|++||+.+++++..+.+|...|.+++|+|++ .+|++|+.|++|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i 282 (344)
T 4gqb_B 203 KPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSL 282 (344)
T ss_dssp SCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred ceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeE
Confidence 77665543333335788999995 5688999999999999999999999999999999999999997 579999999999
Q ss_pred EEeC
Q psy15417 173 RIWN 176 (176)
Q Consensus 173 ~vwd 176 (176)
+|||
T Consensus 283 ~vwd 286 (344)
T 4gqb_B 283 AVLD 286 (344)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 9997
No 3
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.2e-34 Score=216.57 Aligned_cols=162 Identities=57% Similarity=1.041 Sum_probs=148.8
Q ss_pred ccCCCccCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417 15 AASGHTGDVMSLSLAP--DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR 92 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~--~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 92 (176)
.+.+|...|.+++|+| ++.+|++|+.||+|++||++++++...+.+|...|++++|+|++..|++++.|++|++||++
T Consensus 191 ~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~ 270 (354)
T 2pbi_B 191 SFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLR 270 (354)
T ss_dssp EEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 4678999999999987 46899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417 93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL 172 (176)
Q Consensus 93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v 172 (176)
....+..+........+.++.|+|++.++++|+.|++|++||+.+++.+..+.+|.+.|.+++|+|++.+|++|+.|++|
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v 350 (354)
T 2pbi_B 271 ADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTL 350 (354)
T ss_dssp TTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEE
T ss_pred CCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCE
Confidence 87766555544434467899999999999999999999999998998888999999999999999999999999999999
Q ss_pred EEeC
Q psy15417 173 RIWN 176 (176)
Q Consensus 173 ~vwd 176 (176)
++|+
T Consensus 351 ~vW~ 354 (354)
T 2pbi_B 351 RVWA 354 (354)
T ss_dssp EEEC
T ss_pred EecC
Confidence 9997
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.3e-34 Score=211.57 Aligned_cols=160 Identities=19% Similarity=0.362 Sum_probs=146.0
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
.+.+|.+.|.+++|+|++.+|++|+.||+|++||+.+++.+..+..|..+|.+++|+|+++.+++++.|++|++||+.++
T Consensus 8 ~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~ 87 (304)
T 2ynn_A 8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87 (304)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred eecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC
Confidence 47789999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc-eeeeeecCCCccEEEEEEeC-CCCEEEEccCCCcE
Q psy15417 95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT-ERAGILAGHDNRVSCLGVTE-DGMAVATGSWDSFL 172 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~tg~~d~~v 172 (176)
+.+..+. .+...|.+++|+|++.++++|+.|+++++||+..+ .....+.+|...|.+++|+| ++..|++|+.|++|
T Consensus 88 ~~~~~~~--~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v 165 (304)
T 2ynn_A 88 EKVVDFE--AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (304)
T ss_dssp CEEEEEE--CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEE
T ss_pred cEEEEEe--CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeE
Confidence 7765543 23356899999999999999999999999998776 45567889999999999999 57899999999999
Q ss_pred EEeC
Q psy15417 173 RIWN 176 (176)
Q Consensus 173 ~vwd 176 (176)
++||
T Consensus 166 ~iwd 169 (304)
T 2ynn_A 166 KVWS 169 (304)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9996
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.6e-33 Score=208.38 Aligned_cols=159 Identities=22% Similarity=0.356 Sum_probs=147.2
Q ss_pred cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417 16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 95 (176)
+.+|...|.+++|+|++++|++|+.||.|++||+++++++..+.+|..+|++++|+|++.+|++++.|++|++||++..+
T Consensus 160 ~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~ 239 (321)
T 3ow8_A 160 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 239 (321)
T ss_dssp EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC
T ss_pred ecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc
Confidence 45688899999999999999999999999999999999999999999999999999999999999999999999998776
Q ss_pred eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417 96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175 (176)
Q Consensus 96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw 175 (176)
....+. .+...|.+++|+|++.+|++++.|+++++||+.+++++..+.+|...|.+++|+|++.+|++++.|++|++|
T Consensus 240 ~~~~~~--~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vw 317 (321)
T 3ow8_A 240 LAGTLS--GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 317 (321)
T ss_dssp EEEEEC--CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred eeEEEc--CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 654432 333468899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C
Q psy15417 176 N 176 (176)
Q Consensus 176 d 176 (176)
|
T Consensus 318 d 318 (321)
T 3ow8_A 318 D 318 (321)
T ss_dssp E
T ss_pred e
Confidence 7
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.6e-33 Score=206.04 Aligned_cols=161 Identities=25% Similarity=0.421 Sum_probs=142.5
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-eeeeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG-SCKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIR 92 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~ 92 (176)
.+.+|.+.|.+++|+|++.+|++|+.|++|++||++++ .....+.+|...|.+++|+| ++..|++++.|++|++||++
T Consensus 92 ~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~ 171 (304)
T 2ynn_A 92 DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG 171 (304)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETT
T ss_pred EEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 46789999999999999999999999999999999887 56678899999999999999 57899999999999999998
Q ss_pred CCCeeeEEeecceEeceEEEEECC--CCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417 93 ADQELAMYSHDNIICGITSVAFSR--SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDS 170 (176)
Q Consensus 93 ~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~ 170 (176)
.......... .+...+..+.|+| ++.++++|+.|++|++||+.+++++..+.+|...|.+++|+|++.+|++|+.|+
T Consensus 172 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg 250 (304)
T 2ynn_A 172 QSTPNFTLTT-GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG 250 (304)
T ss_dssp CSSCSEEEEC-CCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTS
T ss_pred CCCccceecc-CCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCC
Confidence 7655433322 1223577788876 678999999999999999999999999999999999999999999999999999
Q ss_pred cEEEeC
Q psy15417 171 FLRIWN 176 (176)
Q Consensus 171 ~v~vwd 176 (176)
+|++||
T Consensus 251 ~i~iWd 256 (304)
T 2ynn_A 251 TLKIWN 256 (304)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 999996
No 7
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4e-33 Score=214.34 Aligned_cols=160 Identities=25% Similarity=0.428 Sum_probs=148.4
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
.+.||.++|++++|+|++.+|++|+.||+|++||+.+++...++++|..+|.+++|+|++..|++|+.|++|++||+.+.
T Consensus 103 ~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~ 182 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182 (410)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS
T ss_pred eecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417 95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 174 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v 174 (176)
+.+..+ ..+...|.++.|+|++..+++|+.|++|++||+.++.++..+.+|...+.+++++|++.+|++|+.|++|++
T Consensus 183 ~~~~~~--~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~v 260 (410)
T 1vyh_C 183 ECIRTM--HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260 (410)
T ss_dssp CEEECC--CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ceeEEE--cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEE
Confidence 655433 223346899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eC
Q psy15417 175 WN 176 (176)
Q Consensus 175 wd 176 (176)
||
T Consensus 261 wd 262 (410)
T 1vyh_C 261 WV 262 (410)
T ss_dssp EE
T ss_pred EE
Confidence 96
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.2e-32 Score=202.88 Aligned_cols=159 Identities=23% Similarity=0.374 Sum_probs=143.1
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
.+.+|...|.+++|+|++.+|++|+.|++|++||++++++...+.+|..+|.+++|+|++..+++++.|++|++||++..
T Consensus 60 ~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~ 139 (319)
T 3frx_A 60 SFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ 139 (319)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC
T ss_pred EEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred CeeeEEeecceEeceEEEEECCC------CcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccC
Q psy15417 95 QELAMYSHDNIICGITSVAFSRS------GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW 168 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~ 168 (176)
.+... ..+...+.++.++|. +..+++++.|+++++||+...+....+.+|...|.+++|+|++.+|++|+.
T Consensus 140 -~~~~~--~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~ 216 (319)
T 3frx_A 140 -CLATL--LGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGK 216 (319)
T ss_dssp -EEEEE--CCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEET
T ss_pred -eEEEE--eccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 32222 222345788899885 448999999999999999998888899999999999999999999999999
Q ss_pred CCcEEEeC
Q psy15417 169 DSFLRIWN 176 (176)
Q Consensus 169 d~~v~vwd 176 (176)
|++|++||
T Consensus 217 dg~i~iwd 224 (319)
T 3frx_A 217 DGEIMLWN 224 (319)
T ss_dssp TCEEEEEE
T ss_pred CCeEEEEE
Confidence 99999996
No 9
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.1e-32 Score=208.49 Aligned_cols=162 Identities=22% Similarity=0.244 Sum_probs=145.7
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCC-cEEEEeeCCCcEEEeeCCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WAFATGSDDATCRLFDIRA 93 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~~ 93 (176)
...+|.+.|++++|+|++++|++|+.|++|++||+++++++..+++|...|++++|+|++ ..+++++.|++|++||+++
T Consensus 134 ~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~ 213 (357)
T 4g56_B 134 AKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRK 213 (357)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTS
T ss_pred ccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCC
Confidence 456899999999999999999999999999999999999999999999999999999987 4789999999999999998
Q ss_pred CCeeeEEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCC-CEEEEccCCCc
Q psy15417 94 DQELAMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG-MAVATGSWDSF 171 (176)
Q Consensus 94 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~tg~~d~~ 171 (176)
++.............+.+++|+|++ .++++|+.|+.|++||+..++....+.+|...|.+++|+|++ .+|++|+.|++
T Consensus 214 ~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~ 293 (357)
T 4g56_B 214 PKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCT 293 (357)
T ss_dssp SSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSC
T ss_pred CceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCE
Confidence 7766554443334568899999984 688999999999999999999999999999999999999987 57999999999
Q ss_pred EEEeC
Q psy15417 172 LRIWN 176 (176)
Q Consensus 172 v~vwd 176 (176)
|+|||
T Consensus 294 i~iwd 298 (357)
T 4g56_B 294 VAVLD 298 (357)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 99997
No 10
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.1e-32 Score=204.96 Aligned_cols=161 Identities=24% Similarity=0.417 Sum_probs=142.3
Q ss_pred cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC--eeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417 16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG--SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA 93 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~--~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 93 (176)
..||.+.|.+++|+|++.+|++|+.|+++++||.+++ ++...+.+|..+|.+++|+|++++|++++.|++|++||+++
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECT
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCC
Confidence 4689999999999999999999999999999999876 46788999999999999999999999999999999999987
Q ss_pred CCeeeE-EeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCce--eeeeecCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417 94 DQELAM-YSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTE--RAGILAGHDNRVSCLGVTEDGMAVATGSWDS 170 (176)
Q Consensus 94 ~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~ 170 (176)
+..... .....+...|.++.|+|++.++++|+.|+++++||....+ ....+.+|...|.+++|+|++.+|++|+.|+
T Consensus 137 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 137 EDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp TSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC
Confidence 654322 2233344568899999999999999999999999987664 4567889999999999999999999999999
Q ss_pred cEEEeC
Q psy15417 171 FLRIWN 176 (176)
Q Consensus 171 ~v~vwd 176 (176)
+|++||
T Consensus 217 ~v~iW~ 222 (345)
T 3fm0_A 217 TVRIWR 222 (345)
T ss_dssp CEEEEE
T ss_pred eEEEec
Confidence 999995
No 11
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=7.8e-32 Score=199.45 Aligned_cols=160 Identities=25% Similarity=0.462 Sum_probs=148.3
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
.+.||.+.|.+++|+|++++|++|+.||.|++||..+++....+.+|..+|.+++|+|+++.|++++.|+.|++||++++
T Consensus 18 ~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~ 97 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG 97 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417 95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 174 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v 174 (176)
+.+..+. .+...+.++.|+|++.++++|+.|+++++||+..++....+..|...+.+++|+|++.+|++|+.|+.|++
T Consensus 98 ~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 175 (312)
T 4ery_A 98 KCLKTLK--GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 175 (312)
T ss_dssp CEEEEEE--CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred cEEEEEc--CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Confidence 7665443 22346889999999999999999999999999999988999999999999999999999999999999999
Q ss_pred eC
Q psy15417 175 WN 176 (176)
Q Consensus 175 wd 176 (176)
||
T Consensus 176 wd 177 (312)
T 4ery_A 176 WD 177 (312)
T ss_dssp EE
T ss_pred EE
Confidence 96
No 12
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.3e-32 Score=204.41 Aligned_cols=161 Identities=24% Similarity=0.409 Sum_probs=141.9
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
.+.+|...|.+++|+|++.++++|+.|++|++||++++++...+.+|..+|.+++|+|++.++++++.|++|++||+...
T Consensus 71 ~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~ 150 (343)
T 2xzm_R 71 ALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE 150 (343)
T ss_dssp EECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC
T ss_pred hhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999743
Q ss_pred CeeeEEeecceEeceEEEEECCCC----------cEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEE
Q psy15417 95 QELAMYSHDNIICGITSVAFSRSG----------RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVA 164 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~~----------~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 164 (176)
..........+...+.++.|+|++ .++++++.|+++++|| ...+....+.+|...|.+++|+|++.+|+
T Consensus 151 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~ 229 (343)
T 2xzm_R 151 CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIA 229 (343)
T ss_dssp EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEE
Confidence 222211112333468899999987 7899999999999999 55667778889999999999999999999
Q ss_pred EccCCCcEEEeC
Q psy15417 165 TGSWDSFLRIWN 176 (176)
Q Consensus 165 tg~~d~~v~vwd 176 (176)
+|+.|+.|++||
T Consensus 230 sgs~dg~v~iwd 241 (343)
T 2xzm_R 230 TGGKDKKLLIWD 241 (343)
T ss_dssp EEETTCEEEEEE
T ss_pred EEcCCCeEEEEE
Confidence 999999999996
No 13
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.1e-32 Score=204.20 Aligned_cols=160 Identities=23% Similarity=0.359 Sum_probs=148.1
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
.+.||...|.+++|++++.++++++.|++|++||+++++++..+..|...+.+++|+|++++|++++.|+.+++|+++++
T Consensus 75 ~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~ 154 (321)
T 3ow8_A 75 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG 154 (321)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTC
T ss_pred eeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417 95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 174 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v 174 (176)
+........ ...+.+++|+|+++++++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++.+|++|+.|++|++
T Consensus 155 ~~~~~~~~~--~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~i 232 (321)
T 3ow8_A 155 KKEYSLDTR--GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKI 232 (321)
T ss_dssp SEEEEEECS--SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred ceeEEecCC--CceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEE
Confidence 765444322 235789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eC
Q psy15417 175 WN 176 (176)
Q Consensus 175 wd 176 (176)
||
T Consensus 233 wd 234 (321)
T 3ow8_A 233 YD 234 (321)
T ss_dssp EE
T ss_pred EE
Confidence 96
No 14
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.4e-32 Score=209.17 Aligned_cols=160 Identities=51% Similarity=0.976 Sum_probs=142.2
Q ss_pred CCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcC-CCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 17 SGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIR-DGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 17 ~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~-~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
.+|...|.+++|++ ++.+|++|+.|++|++||++ .++....+.+|...|++++|+|++.+|++++.|++|++||++++
T Consensus 202 ~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~ 281 (380)
T 3iz6_a 202 SGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG 281 (380)
T ss_dssp SSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTT
T ss_pred CCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC
Confidence 68999999999977 88999999999999999998 45778899999999999999999999999999999999999988
Q ss_pred CeeeEEeecc-----eEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeee----cCCCccEEEEEEeCCCCEEEE
Q psy15417 95 QELAMYSHDN-----IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL----AGHDNRVSCLGVTEDGMAVAT 165 (176)
Q Consensus 95 ~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~t 165 (176)
+.+..+.... ....+.+++|+|++.++++|+.|+.|++||...++....+ .+|.+.|.+++|+|++.+|++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s 361 (380)
T 3iz6_a 282 HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCT 361 (380)
T ss_dssp EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEE
T ss_pred cEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEE
Confidence 7766554321 1123778999999999999999999999998887776655 679999999999999999999
Q ss_pred ccCCCcEEEeC
Q psy15417 166 GSWDSFLRIWN 176 (176)
Q Consensus 166 g~~d~~v~vwd 176 (176)
|+.|++|++|+
T Consensus 362 gs~D~~i~iW~ 372 (380)
T 3iz6_a 362 GSWDKNLKIWA 372 (380)
T ss_dssp ECTTSCEEEEE
T ss_pred eeCCCCEEEEe
Confidence 99999999996
No 15
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=8.1e-32 Score=207.03 Aligned_cols=160 Identities=27% Similarity=0.444 Sum_probs=147.1
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
.+.+|...|.+++|+|++.+|++|+.|++|++||+++++++.++.+|...|.++.++|++..+++++.|++|++||++++
T Consensus 187 ~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~ 266 (410)
T 1vyh_C 187 TMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266 (410)
T ss_dssp CCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CeeeEEeecceEeceEEEEECCC--------------------CcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEE
Q psy15417 95 QELAMYSHDNIICGITSVAFSRS--------------------GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCL 154 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~ 154 (176)
+....+. .+...+.++.|+|+ +.++++|+.|++|++||+.+++++..+.+|...|.++
T Consensus 267 ~~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v 344 (410)
T 1vyh_C 267 ECKAELR--EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 344 (410)
T ss_dssp CEEEEEC--CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE
T ss_pred ceeeEec--CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEE
Confidence 6654432 23346889999996 6689999999999999999999999999999999999
Q ss_pred EEeCCCCEEEEccCCCcEEEeC
Q psy15417 155 GVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 155 ~~~~~~~~l~tg~~d~~v~vwd 176 (176)
+|+|++.+|++|+.|++|++||
T Consensus 345 ~~~~~g~~l~s~s~D~~i~vwd 366 (410)
T 1vyh_C 345 LFHSGGKFILSCADDKTLRVWD 366 (410)
T ss_dssp EECSSSSCEEEEETTTEEEEEC
T ss_pred EEcCCCCEEEEEeCCCeEEEEE
Confidence 9999999999999999999997
No 16
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=6.7e-32 Score=199.19 Aligned_cols=162 Identities=20% Similarity=0.317 Sum_probs=137.4
Q ss_pred ccCCCccCeEEEEEcCC--CCEEEEEeCCCeEEEEEcCCCe--eeeEecCCCCCeeEEEEccC--CcEEEEeeCCCcEEE
Q psy15417 15 AASGHTGDVMSLSLAPD--MRTFVSGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFPN--GWAFATGSDDATCRL 88 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~--~~~l~s~s~dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~d~~i~i 88 (176)
.+.||.+.|.+++|+++ +.+|++|+.|++|++||+++++ ....+.+|..+|++++|+|+ +..|++++.|++|++
T Consensus 48 ~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~ 127 (297)
T 2pm7_B 48 TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSV 127 (297)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred EEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEE
Confidence 57899999999999864 8899999999999999999874 56678889999999999997 889999999999999
Q ss_pred eeCCCCCeeeEEeecceEeceEEEEECCC-------------CcEEEEEcCCCeEEEEeCCCce----eeeeecCCCccE
Q psy15417 89 FDIRADQELAMYSHDNIICGITSVAFSRS-------------GRLLLAGYDDFNCNVWDSMKTE----RAGILAGHDNRV 151 (176)
Q Consensus 89 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~-------------~~~l~~g~~d~~i~v~d~~~~~----~~~~~~~~~~~i 151 (176)
||++............+...+.++.|+|+ +.+|++|+.|++|++||+...+ ....+.+|...|
T Consensus 128 wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V 207 (297)
T 2pm7_B 128 VEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV 207 (297)
T ss_dssp EEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE
T ss_pred EEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCce
Confidence 99986542211222233346889999997 4689999999999999976654 556788999999
Q ss_pred EEEEEeCCC---CEEEEccCCCcEEEeC
Q psy15417 152 SCLGVTEDG---MAVATGSWDSFLRIWN 176 (176)
Q Consensus 152 ~~~~~~~~~---~~l~tg~~d~~v~vwd 176 (176)
.+++|+|++ .+|++|+.|++|++||
T Consensus 208 ~~v~~sp~~~~~~~las~s~D~~v~iWd 235 (297)
T 2pm7_B 208 RDVAWSPTVLLRSYMASVSQDRTCIIWT 235 (297)
T ss_dssp EEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred EEEEECCCCCCceEEEEEECCCcEEEEE
Confidence 999999984 8999999999999996
No 17
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-31 Score=201.32 Aligned_cols=162 Identities=22% Similarity=0.301 Sum_probs=139.6
Q ss_pred ccCCCcc-CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeee--e-EecCCCCCeeEEEEccCCcEEEEeeCCCcEEEee
Q psy15417 15 AASGHTG-DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK--Q-TFPGHESDINAVTFFPNGWAFATGSDDATCRLFD 90 (176)
Q Consensus 15 ~~~gh~~-~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~--~-~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd 90 (176)
.+.+|.+ .|.+++|+|++++|++|+.|++|++||+.+++.. . ...+|...|++++|+|++++|++++.|+++++|+
T Consensus 10 ~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~ 89 (345)
T 3fm0_A 10 RVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWK 89 (345)
T ss_dssp EECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEE
Confidence 4678988 9999999999999999999999999999887633 2 2368999999999999999999999999999999
Q ss_pred CCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc---eeeeeecCCCccEEEEEEeCCCCEEEEcc
Q psy15417 91 IRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT---ERAGILAGHDNRVSCLGVTEDGMAVATGS 167 (176)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~tg~ 167 (176)
+..+..........+...|.+++|+|++.+|++|+.|+++++||+... +....+.+|...|.+++|+|++.+|++|+
T Consensus 90 ~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s 169 (345)
T 3fm0_A 90 KNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASAS 169 (345)
T ss_dssp ECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEE
T ss_pred ccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEe
Confidence 876643333334444457899999999999999999999999998664 34566788999999999999999999999
Q ss_pred CCCcEEEeC
Q psy15417 168 WDSFLRIWN 176 (176)
Q Consensus 168 ~d~~v~vwd 176 (176)
.|++|++||
T Consensus 170 ~d~~i~~w~ 178 (345)
T 3fm0_A 170 YDDTVKLYR 178 (345)
T ss_dssp TTSCEEEEE
T ss_pred CCCcEEEEE
Confidence 999999996
No 18
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-31 Score=199.21 Aligned_cols=159 Identities=21% Similarity=0.405 Sum_probs=132.7
Q ss_pred CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-------CeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEee
Q psy15417 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD-------GSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFD 90 (176)
Q Consensus 18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~-------~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd 90 (176)
+|.+.|.+++|+|++.+|++|+.|++|++||++. .++...+.+|..+|.+++|+|++++|++++.|++|++||
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd 135 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWE 135 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 4999999999999999999999999999999853 356778899999999999999999999999999999999
Q ss_pred CCCC-Cee-eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc--eeeeeecCCCccEEEEEEeCC--CCEEE
Q psy15417 91 IRAD-QEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT--ERAGILAGHDNRVSCLGVTED--GMAVA 164 (176)
Q Consensus 91 ~~~~-~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~--~~~~~~~~~~~~i~~~~~~~~--~~~l~ 164 (176)
++.. +.. .......+...|.++.|+|++.+|++|+.|++|++||.... +++..+.+|...|.+++|+|+ +..|+
T Consensus 136 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 215 (330)
T 2hes_X 136 TDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLC 215 (330)
T ss_dssp CCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEE
T ss_pred ccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEE
Confidence 9532 221 11223334457899999999999999999999999997655 577788899999999999998 67899
Q ss_pred EccCCCcEEEeC
Q psy15417 165 TGSWDSFLRIWN 176 (176)
Q Consensus 165 tg~~d~~v~vwd 176 (176)
+|+.|++|++||
T Consensus 216 s~s~D~~v~iw~ 227 (330)
T 2hes_X 216 SGSDDSTVRVWK 227 (330)
T ss_dssp EEETTSCEEEEE
T ss_pred EEeCCCeEEEEE
Confidence 999999999996
No 19
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.7e-31 Score=197.06 Aligned_cols=162 Identities=18% Similarity=0.252 Sum_probs=137.3
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC--CeeeeEecCCCCCeeEEEEccC--CcEEEEeeCCCcEEEee
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD--GSCKQTFPGHESDINAVTFFPN--GWAFATGSDDATCRLFD 90 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~--~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~d~~i~iwd 90 (176)
.+.+|.+.|.+++|+|++++|++|+.|++|++||+.. .+++.++.+|.++|.+++|+|+ +..|++++.|++|++||
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 4678999999999999999999999999999999974 3678899999999999999763 88999999999999999
Q ss_pred CCCCCeeeEEeecceEeceEEEEECCC--CcEEEEEcCCCeEEEEeCCCce--eeeeecCCCccEEEEEEeCC-------
Q psy15417 91 IRADQELAMYSHDNIICGITSVAFSRS--GRLLLAGYDDFNCNVWDSMKTE--RAGILAGHDNRVSCLGVTED------- 159 (176)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~g~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~------- 159 (176)
+++++.........+...|.+++|+|+ +.++++++.|+++++||+.... ....+.+|...|.+++|+|+
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccccc
Confidence 987642222222223346889999998 8899999999999999987653 23456789999999999996
Q ss_pred ------CCEEEEccCCCcEEEeC
Q psy15417 160 ------GMAVATGSWDSFLRIWN 176 (176)
Q Consensus 160 ------~~~l~tg~~d~~v~vwd 176 (176)
+.+|++|+.|++|++||
T Consensus 164 ~~~~~~~~~l~sgs~D~~v~lwd 186 (297)
T 2pm7_B 164 HNGTKESRKFVTGGADNLVKIWK 186 (297)
T ss_dssp ------CCEEEEEETTSCEEEEE
T ss_pred CCCCCCcceEEEEcCCCcEEEEE
Confidence 46899999999999996
No 20
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.9e-31 Score=197.91 Aligned_cols=161 Identities=18% Similarity=0.388 Sum_probs=144.1
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
.+.||.+.|.+++|+|++++|++|+.||+|++||..+++....++.|...|.+++|+|++.++++++.|+.+++|++.+.
T Consensus 50 ~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~ 129 (340)
T 1got_B 50 TLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTC
T ss_pred eecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999765
Q ss_pred Cee--eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417 95 QEL--AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL 172 (176)
Q Consensus 95 ~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v 172 (176)
+.. .......+...+.++.|++++. +++++.|+++++||+.+++....+.+|...|.+++|+|++.++++|+.|++|
T Consensus 130 ~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v 208 (340)
T 1got_B 130 EGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASA 208 (340)
T ss_dssp SBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcE
Confidence 421 1122333345688899988875 7889999999999999999999999999999999999999999999999999
Q ss_pred EEeC
Q psy15417 173 RIWN 176 (176)
Q Consensus 173 ~vwd 176 (176)
++||
T Consensus 209 ~~wd 212 (340)
T 1got_B 209 KLWD 212 (340)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9996
No 21
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.1e-31 Score=211.69 Aligned_cols=162 Identities=18% Similarity=0.363 Sum_probs=143.6
Q ss_pred ccCCCccCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417 15 AASGHTGDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA 93 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 93 (176)
.+.||.+.|++++|+|++. .|++|+.|++|++||.+++++..++.+|...|++++|+|++++|++++.|++|++||+++
T Consensus 142 ~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~ 221 (611)
T 1nr0_A 142 NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD 221 (611)
T ss_dssp CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred eecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCC
Confidence 4679999999999999986 699999999999999999999999999999999999999999999999999999999988
Q ss_pred CCeeeEEeec-----ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeee--------------------------
Q psy15417 94 DQELAMYSHD-----NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG-------------------------- 142 (176)
Q Consensus 94 ~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~-------------------------- 142 (176)
++....+... .+...|.+++|+|++.+|++++.|+++++||+.+++...
T Consensus 222 g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s 301 (611)
T 1nr0_A 222 GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSIS 301 (611)
T ss_dssp CCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEE
T ss_pred CcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEe
Confidence 7766554211 234578999999999999999999999999987665432
Q ss_pred -----------------eecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 143 -----------------ILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 143 -----------------~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
.+.+|...|.+++|+|++.+|++++.|++|++||
T Consensus 302 ~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd 352 (611)
T 1nr0_A 302 ANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWD 352 (611)
T ss_dssp TTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Confidence 3357889999999999999999999999999996
No 22
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.4e-30 Score=196.66 Aligned_cols=159 Identities=23% Similarity=0.384 Sum_probs=137.3
Q ss_pred cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeE--------------------------------------
Q psy15417 16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT-------------------------------------- 57 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~-------------------------------------- 57 (176)
+.||.+.|++++|+|++.+|++|+.||+|++||..+++....
T Consensus 60 l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~ 139 (354)
T 2pbi_B 60 LKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDK 139 (354)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCT
T ss_pred ecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccc
Confidence 679999999999999999999999999999999877654333
Q ss_pred ----------ecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECC--CCcEEEEEc
Q psy15417 58 ----------FPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR--SGRLLLAGY 125 (176)
Q Consensus 58 ----------~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~g~ 125 (176)
+.+|...|.+++|+|++..+++++.|++|++||+++++.+..+. .+...+.++.++| ++.++++|+
T Consensus 140 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~g~~l~sgs 217 (354)
T 2pbi_B 140 NENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH--GHGADVLCLDLAPSETGNTFVSGG 217 (354)
T ss_dssp TCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE--CCSSCEEEEEECCCSSCCEEEEEE
T ss_pred cccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc--CCCCCeEEEEEEeCCCCCEEEEEe
Confidence 33467778888888888889999999999999998877665443 2224678888887 468999999
Q ss_pred CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 126 DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 126 ~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
.|+++++||+.++++...+.+|...|.+++|+|++.+|++|+.|++|++||
T Consensus 218 ~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd 268 (354)
T 2pbi_B 218 CDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYD 268 (354)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 999999999999999999999999999999999999999999999999996
No 23
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-30 Score=193.96 Aligned_cols=160 Identities=19% Similarity=0.286 Sum_probs=132.6
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC--eeeeEe-cC-CCCCeeEEEEccCCcEEEEeeCCCcEEEee
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG--SCKQTF-PG-HESDINAVTFFPNGWAFATGSDDATCRLFD 90 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~--~~~~~~-~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd 90 (176)
.+.+|.+.|.+++|+|+ +|++|+.|++|++||++++ +....+ .+ |..+|++++|+|++.+|++++.|++|++||
T Consensus 9 ~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~ 86 (330)
T 2hes_X 9 SLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWA 86 (330)
T ss_dssp EEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 46789999999999987 9999999999999999875 455556 44 999999999999999999999999999999
Q ss_pred CCCCC-----eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC----ceeeeeecCCCccEEEEEEeCCCC
Q psy15417 91 IRADQ-----ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK----TERAGILAGHDNRVSCLGVTEDGM 161 (176)
Q Consensus 91 ~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~----~~~~~~~~~~~~~i~~~~~~~~~~ 161 (176)
++... .........+...|.+++|+|++.+|++|+.|+++++||+.. .+++..+.+|...|.+++|+|++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 166 (330)
T 2hes_X 87 KEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA 166 (330)
T ss_dssp C-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSS
T ss_pred cccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCC
Confidence 85321 111122334456799999999999999999999999999842 255677889999999999999999
Q ss_pred EEEEccCCCcEEEeC
Q psy15417 162 AVATGSWDSFLRIWN 176 (176)
Q Consensus 162 ~l~tg~~d~~v~vwd 176 (176)
+|++|+.|++|++||
T Consensus 167 ~l~s~s~D~~i~iW~ 181 (330)
T 2hes_X 167 LLASSSYDDTVRIWK 181 (330)
T ss_dssp EEEEEETTSCEEEEE
T ss_pred EEEEEcCCCeEEEEE
Confidence 999999999999996
No 24
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.6e-31 Score=201.45 Aligned_cols=162 Identities=22% Similarity=0.446 Sum_probs=135.2
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC-
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA- 93 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~- 93 (176)
.+.||.+.|++++|+|++.+|++|+.||+|++||+.+++....++.|...|.+++|+|+++.+++++.|+.+++||+.+
T Consensus 61 ~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~ 140 (380)
T 3iz6_a 61 TLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQ 140 (380)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCC
T ss_pred cccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCC
Confidence 4789999999999999999999999999999999999999999999998899999998888877777777777777532
Q ss_pred -------------------------------------------------CCeeeEEee---cceEeceEEEEECC-CCcE
Q psy15417 94 -------------------------------------------------DQELAMYSH---DNIICGITSVAFSR-SGRL 120 (176)
Q Consensus 94 -------------------------------------------------~~~~~~~~~---~~~~~~v~~~~~~~-~~~~ 120 (176)
++.+..+.. ..+...+.++.++| ++.+
T Consensus 141 ~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 220 (380)
T 3iz6_a 141 ADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANM 220 (380)
T ss_dssp SSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCE
T ss_pred ccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCE
Confidence 211111110 11223577888877 7889
Q ss_pred EEEEcCCCeEEEEeCC-CceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 121 LLAGYDDFNCNVWDSM-KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 121 l~~g~~d~~i~v~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
+++|+.|+++++||+. ..+....+.+|...|.+++|+|++.+|++|+.|++|++||
T Consensus 221 l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd 277 (380)
T 3iz6_a 221 FISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFD 277 (380)
T ss_dssp EEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEE
T ss_pred EEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEE
Confidence 9999999999999987 4567778889999999999999999999999999999996
No 25
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.98 E-value=2.1e-30 Score=198.00 Aligned_cols=155 Identities=34% Similarity=0.557 Sum_probs=139.8
Q ss_pred CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA 98 (176)
Q Consensus 19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~ 98 (176)
+...|.+++|+|++++|++|+.|++|++||+++++....+.+|...|.+++|+|++..|++++.|++|++||+++++...
T Consensus 122 ~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSL 201 (393)
T ss_dssp CCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred CceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEE
Confidence 33459999999999999999999999999999999999999999999999999999999999999999999999877655
Q ss_pred EEeecceEeceEEEEECC-CCcEEEEEcCCCeEEEEeCCCceeeeee-------cCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417 99 MYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNVWDSMKTERAGIL-------AGHDNRVSCLGVTEDGMAVATGSWDS 170 (176)
Q Consensus 99 ~~~~~~~~~~v~~~~~~~-~~~~l~~g~~d~~i~v~d~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~l~tg~~d~ 170 (176)
..... ..+.+++|+| ++.++++|+.|+++++||..+++....+ .+|...|.+++|+|++.+|++|+.|+
T Consensus 202 ~~~~~---~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~ 278 (393)
T 1erj_A 202 TLSIE---DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR 278 (393)
T ss_dssp EEECS---SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEcC---CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 54443 3577899999 8999999999999999999887766555 57889999999999999999999999
Q ss_pred cEEEeC
Q psy15417 171 FLRIWN 176 (176)
Q Consensus 171 ~v~vwd 176 (176)
+|++||
T Consensus 279 ~v~~wd 284 (393)
T 1erj_A 279 SVKLWN 284 (393)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999996
No 26
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.98 E-value=6.6e-31 Score=198.06 Aligned_cols=169 Identities=19% Similarity=0.204 Sum_probs=137.9
Q ss_pred ccccccccCCCcccCCCccCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEec--CCCCCeeEEEEccC-CcEEE
Q psy15417 3 DHLDKSALLGSPAASGHTGDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFP--GHESDINAVTFFPN-GWAFA 78 (176)
Q Consensus 3 ~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~-~~~l~ 78 (176)
|++++...+. .+.+|.+.|.+++|++++. +|++|+.|++|++||+++++....+. .|...+++++|+|+ +++|+
T Consensus 154 wd~~~~~~~~--~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 231 (344)
T 4gqb_B 154 WDLAQQVVLS--SYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFV 231 (344)
T ss_dssp EETTTTEEEE--EECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEE
T ss_pred EECCCCcEEE--EEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceE
Confidence 3444443332 4678999999999999875 78999999999999999998877764 35567999999995 67899
Q ss_pred EeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEe
Q psy15417 79 TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVT 157 (176)
Q Consensus 79 s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~ 157 (176)
+|+.|++|++||+++++.+..+. .+...|.+++|+|++ .+|++|+.|++|++||+..++.. ...+|.+.|.+++|+
T Consensus 232 sg~~dg~v~~wd~~~~~~~~~~~--~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~s 308 (344)
T 4gqb_B 232 FGDENGTVSLVDTKSTSCVLSSA--VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWS 308 (344)
T ss_dssp EEETTSEEEEEESCC--CCEEEE--CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEEC
T ss_pred EeccCCcEEEEECCCCcEEEEEc--CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEe
Confidence 99999999999999887765543 233468899999998 57899999999999998877654 567899999999999
Q ss_pred CCCC-EEEEccCCCcEEEeC
Q psy15417 158 EDGM-AVATGSWDSFLRIWN 176 (176)
Q Consensus 158 ~~~~-~l~tg~~d~~v~vwd 176 (176)
|++. +|++||.|++|++|+
T Consensus 309 p~~~~llas~s~D~~v~~w~ 328 (344)
T 4gqb_B 309 PLNHSLLTTVGWDHQVVHHV 328 (344)
T ss_dssp SSSTTEEEEEETTSCEEEEE
T ss_pred CCCCeEEEEEcCCCeEEEEE
Confidence 9875 678999999999995
No 27
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.98 E-value=2.5e-30 Score=194.22 Aligned_cols=160 Identities=23% Similarity=0.384 Sum_probs=137.8
Q ss_pred ccCCCccCeEEEEE-----cC-CCCEEEEEeCCCeEEEEEcCCC-------eeeeEecCCCCCeeEEEEccCCcEEEEee
Q psy15417 15 AASGHTGDVMSLSL-----AP-DMRTFVSGACDASAKLWDIRDG-------SCKQTFPGHESDINAVTFFPNGWAFATGS 81 (176)
Q Consensus 15 ~~~gh~~~V~~~~~-----~~-~~~~l~s~s~dg~v~~wd~~~~-------~~~~~~~~h~~~v~~v~~~~~~~~l~s~s 81 (176)
.+.||.+.|++++| ++ ++.+|++|+.|++|++||+.+. .....+.+|..+|++++|+|++.++++++
T Consensus 16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s 95 (343)
T 2xzm_R 16 ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSS 95 (343)
T ss_dssp EEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEE
T ss_pred eeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEc
Confidence 57899999999999 76 8999999999999999999753 45678899999999999999999999999
Q ss_pred CCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeee--ecCCCccEEEEEEeCC
Q psy15417 82 DDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI--LAGHDNRVSCLGVTED 159 (176)
Q Consensus 82 ~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~--~~~~~~~i~~~~~~~~ 159 (176)
.|++|++||+++++.+..+. .+...|.+++|+|++..+++++.|++|++||+........ ...|...+.+++|+|+
T Consensus 96 ~D~~v~lwd~~~~~~~~~~~--~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 173 (343)
T 2xzm_R 96 WDKTLRLWDLRTGTTYKRFV--GHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPI 173 (343)
T ss_dssp TTSEEEEEETTSSCEEEEEE--CCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCC
T ss_pred CCCcEEEEECCCCcEEEEEc--CCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccc
Confidence 99999999999887665443 2335789999999999999999999999999864332221 2368889999999998
Q ss_pred C----------CEEEEccCCCcEEEeC
Q psy15417 160 G----------MAVATGSWDSFLRIWN 176 (176)
Q Consensus 160 ~----------~~l~tg~~d~~v~vwd 176 (176)
+ .+|++|+.|++|++||
T Consensus 174 ~~~~~~~~~~~~~l~s~~~d~~i~iwd 200 (343)
T 2xzm_R 174 MKSANKVQPFAPYFASVGWDGRLKVWN 200 (343)
T ss_dssp CCSCSCCCSSCCEEEEEETTSEEEEEE
T ss_pred cccccccCCCCCEEEEEcCCCEEEEEc
Confidence 6 7899999999999996
No 28
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.98 E-value=1.5e-31 Score=198.94 Aligned_cols=162 Identities=17% Similarity=0.238 Sum_probs=132.9
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe--eeeEecCCCCCeeEEEEcc--CCcEEEEeeCCCcEEEee
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFP--NGWAFATGSDDATCRLFD 90 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~--~~~~l~s~s~d~~i~iwd 90 (176)
.+.+|.+.|++++|+|++++|++|+.|++|++||+++++ +..++++|..+|.+++|+| ++..|++++.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 467899999999999999999999999999999998875 5678999999999999975 488999999999999999
Q ss_pred CCCCCeeeEEeecceEeceEEEEECCC--CcEEEEEcCCCeEEEEeCCCce---eeeeecCCCccEEEEEEeCC------
Q psy15417 91 IRADQELAMYSHDNIICGITSVAFSRS--GRLLLAGYDDFNCNVWDSMKTE---RAGILAGHDNRVSCLGVTED------ 159 (176)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~g~~d~~i~v~d~~~~~---~~~~~~~~~~~i~~~~~~~~------ 159 (176)
+++++.........+...|.+++|+|+ +.++++|+.|+++++||+.... ....+.+|...+.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 987643223333334457889999998 7899999999999999987642 23456788889999999987
Q ss_pred -----------CCEEEEccCCCcEEEeC
Q psy15417 160 -----------GMAVATGSWDSFLRIWN 176 (176)
Q Consensus 160 -----------~~~l~tg~~d~~v~vwd 176 (176)
+.+|++|+.|++|++||
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd 195 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWK 195 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEE
T ss_pred cccccccCccccceEEEecCCCeEEEEE
Confidence 36899999999999996
No 29
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.97 E-value=3.7e-30 Score=191.67 Aligned_cols=159 Identities=23% Similarity=0.406 Sum_probs=139.9
Q ss_pred ccCCCccCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCC-----CeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEE
Q psy15417 15 AASGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRD-----GSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRL 88 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~-----~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~i 88 (176)
.+.||.+.|.+++|+|++ .+|++|+.|++|++||+.. +..+..+++|...|.+++|+|++.++++++.|++|++
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~ 91 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRL 91 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEE
Confidence 578999999999999965 8999999999999999864 3456789999999999999999999999999999999
Q ss_pred eeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCC------CCE
Q psy15417 89 FDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTED------GMA 162 (176)
Q Consensus 89 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~------~~~ 162 (176)
||+++++.+..+. .+...|.+++|+|++.++++|+.|++|++||+. ++.+..+.+|...+.++++.|. +..
T Consensus 92 wd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 92 WDVATGETYQRFV--GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp EETTTTEEEEEEE--CCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCE
T ss_pred EECCCCCeeEEEc--cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccE
Confidence 9999887655443 333578999999999999999999999999974 5677788899999999999985 448
Q ss_pred EEEccCCCcEEEeC
Q psy15417 163 VATGSWDSFLRIWN 176 (176)
Q Consensus 163 l~tg~~d~~v~vwd 176 (176)
|++|+.|+.|++||
T Consensus 169 l~s~~~d~~i~~wd 182 (319)
T 3frx_A 169 IISAGNDKMVKAWN 182 (319)
T ss_dssp EEEEETTSCEEEEE
T ss_pred EEEEeCCCEEEEEE
Confidence 99999999999996
No 30
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=9.1e-30 Score=188.32 Aligned_cols=159 Identities=25% Similarity=0.494 Sum_probs=143.5
Q ss_pred cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417 16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 95 (176)
+.+|...|.+++|+|++.+|++|+.|+.|++||+++++++..+.+|...|.+++|+|++.++++++.|+.|++||+++++
T Consensus 61 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 140 (312)
T 4ery_A 61 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 140 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC
T ss_pred hccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec-CCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417 96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA-GHDNRVSCLGVTEDGMAVATGSWDSFLRI 174 (176)
Q Consensus 96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~tg~~d~~v~v 174 (176)
.+..+. .+..++.++.|+|++.++++++.|+.+++||+.+++.+..+. .+...+..++|+|++.+|++++.|+.|++
T Consensus 141 ~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i 218 (312)
T 4ery_A 141 CLKTLP--AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 218 (312)
T ss_dssp EEEEEC--CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred EEEEec--CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEE
Confidence 655443 223468899999999999999999999999998887766554 45667999999999999999999999999
Q ss_pred eC
Q psy15417 175 WN 176 (176)
Q Consensus 175 wd 176 (176)
||
T Consensus 219 wd 220 (312)
T 4ery_A 219 WD 220 (312)
T ss_dssp EE
T ss_pred EE
Confidence 96
No 31
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=5.3e-30 Score=194.33 Aligned_cols=158 Identities=15% Similarity=0.138 Sum_probs=128.6
Q ss_pred CCCccCeEEEEEcCCCCEEEE--EeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 17 SGHTGDVMSLSLAPDMRTFVS--GACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 17 ~gh~~~V~~~~~~~~~~~l~s--~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
..++..+.+++|+|||+++++ ++.|++|++||+++++++..+. |...|.+++|+|+++++++++.++ +.+|+..++
T Consensus 130 ~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~ 207 (365)
T 4h5i_A 130 TNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTG 207 (365)
T ss_dssp CCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTC
T ss_pred CCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccC
Confidence 346677999999999998765 4478999999999999988886 778899999999999999998665 555554332
Q ss_pred Ceee--------------EEee------------------------------------cceEeceEEEEECCCCcEEEEE
Q psy15417 95 QELA--------------MYSH------------------------------------DNIICGITSVAFSRSGRLLLAG 124 (176)
Q Consensus 95 ~~~~--------------~~~~------------------------------------~~~~~~v~~~~~~~~~~~l~~g 124 (176)
+... .+.. ..+...|.+++|+|++++|++|
T Consensus 208 ~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasg 287 (365)
T 4h5i_A 208 SCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLA 287 (365)
T ss_dssp CEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEE
T ss_pred cceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEE
Confidence 2110 0000 0011247899999999999999
Q ss_pred cCCCeEEEEeCCCceeeeee-cCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 125 YDDFNCNVWDSMKTERAGIL-AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 125 ~~d~~i~v~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
+.|++|+|||+.+++++..+ .+|...|.+++|+|++.+||+||.|++|||||
T Consensus 288 s~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ 340 (365)
T 4h5i_A 288 SNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIK 340 (365)
T ss_dssp ETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred cCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 99999999999999988875 68999999999999999999999999999996
No 32
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=3.2e-30 Score=207.10 Aligned_cols=160 Identities=23% Similarity=0.373 Sum_probs=131.8
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe--eeeE-----------------------------------
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS--CKQT----------------------------------- 57 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~--~~~~----------------------------------- 57 (176)
.+.||.+.|++++|+|++++|++|+.|++|++||+.+++ ...+
T Consensus 54 ~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~ 133 (611)
T 1nr0_A 54 IYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFL 133 (611)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEE
T ss_pred EecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEE
Confidence 467999999999999999999999999999999986432 2222
Q ss_pred ---------ecCCCCCeeEEEEccCCc-EEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCC
Q psy15417 58 ---------FPGHESDINAVTFFPNGW-AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD 127 (176)
Q Consensus 58 ---------~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d 127 (176)
+.+|...|++++|+|++. .|++++.|++|++||.+..+....+ ..+...|.+++|+|++.++++|+.|
T Consensus 134 wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l--~~H~~~V~~v~fspdg~~las~s~D 211 (611)
T 1nr0_A 134 FDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTF--GEHTKFVHSVRYNPDGSLFASTGGD 211 (611)
T ss_dssp TTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEE--CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeee--ccccCceEEEEECCCCCEEEEEECC
Confidence 345666667777777664 5888888888899987665443332 3334568999999999999999999
Q ss_pred CeEEEEeCCCceeeeeec-------CCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 128 FNCNVWDSMKTERAGILA-------GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 128 ~~i~v~d~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
++|++||...++....+. +|...|.+++|+|++.+|++|+.|++|++||
T Consensus 212 ~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd 267 (611)
T 1nr0_A 212 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWN 267 (611)
T ss_dssp SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 999999998888777663 7999999999999999999999999999996
No 33
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=2.6e-30 Score=210.06 Aligned_cols=162 Identities=25% Similarity=0.427 Sum_probs=145.2
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
.+.||...|.+++|+|++++|++|+.||+|++||+.++++...+.+|...|.+++|+|++..|++++.|++|++||....
T Consensus 425 ~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~ 504 (694)
T 3dm0_A 425 RLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGE 504 (694)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC
T ss_pred eecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCC
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999998654
Q ss_pred CeeeEEe-ecceEeceEEEEECCCC--cEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCc
Q psy15417 95 QELAMYS-HDNIICGITSVAFSRSG--RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSF 171 (176)
Q Consensus 95 ~~~~~~~-~~~~~~~v~~~~~~~~~--~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~ 171 (176)
....... ...+...|.++.|+|++ ..+++|+.|++|++||+...+....+.+|...|.+++|+|++.+|++|+.|++
T Consensus 505 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~ 584 (694)
T 3dm0_A 505 CKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGV 584 (694)
T ss_dssp EEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSB
T ss_pred cceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe
Confidence 3322211 12333468899999986 58999999999999999998888899999999999999999999999999999
Q ss_pred EEEeC
Q psy15417 172 LRIWN 176 (176)
Q Consensus 172 v~vwd 176 (176)
|++||
T Consensus 585 i~iwd 589 (694)
T 3dm0_A 585 VLLWD 589 (694)
T ss_dssp CEEEE
T ss_pred EEEEE
Confidence 99996
No 34
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=6.7e-30 Score=202.66 Aligned_cols=157 Identities=31% Similarity=0.563 Sum_probs=141.3
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
.+.+|...|.+++|+|++++|++++.|++|++||. +++....+.+|..+|++++|+|++++|++++.|++|++||. ++
T Consensus 421 ~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~ 498 (577)
T 2ymu_A 421 TLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NG 498 (577)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TS
T ss_pred EecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CC
Confidence 35789999999999999999999999999999996 56778899999999999999999999999999999999995 44
Q ss_pred CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417 95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 174 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v 174 (176)
+.+..+. .+...|++++|+|++++|++++.|+.|++||. .++++..+.+|...|.+++|+|++.+|+|++.|++|++
T Consensus 499 ~~~~~~~--~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~ 575 (577)
T 2ymu_A 499 QLLQTLT--GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKL 575 (577)
T ss_dssp CEEEEEE--CCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEE
T ss_pred CEEEEEe--CCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEE
Confidence 4444332 33357899999999999999999999999994 67888899999999999999999999999999999999
Q ss_pred eC
Q psy15417 175 WN 176 (176)
Q Consensus 175 wd 176 (176)
||
T Consensus 576 Wd 577 (577)
T 2ymu_A 576 WN 577 (577)
T ss_dssp EC
T ss_pred eC
Confidence 98
No 35
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=1.4e-29 Score=187.73 Aligned_cols=162 Identities=23% Similarity=0.304 Sum_probs=137.8
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC----eeeeEecCCCCCeeEEEEcc--CCcEEEEeeCCCcEEE
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG----SCKQTFPGHESDINAVTFFP--NGWAFATGSDDATCRL 88 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~----~~~~~~~~h~~~v~~v~~~~--~~~~l~s~s~d~~i~i 88 (176)
.+.||.+.|++++|+|++.+|++|+.||.|++||+.++ +....+.+|..+|.+++|+| ++.+|++++.|+.|++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 46799999999999999999999999999999999876 46778889999999999999 5999999999999999
Q ss_pred eeCCCCCe-------eeEEeecceEeceEEEEECCC--CcEEEEEcCCCeEEEEeCCCce--------------------
Q psy15417 89 FDIRADQE-------LAMYSHDNIICGITSVAFSRS--GRLLLAGYDDFNCNVWDSMKTE-------------------- 139 (176)
Q Consensus 89 wd~~~~~~-------~~~~~~~~~~~~v~~~~~~~~--~~~l~~g~~d~~i~v~d~~~~~-------------------- 139 (176)
||++.++. ........+...+.++.|+|+ +.++++++.|+.+++||+...+
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPAN 165 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSS
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCC
Confidence 99987532 112223333457899999999 9999999999999999975432
Q ss_pred ----------------------------------------eeeeecCCCccEEEEEEeCCC----CEEEEccCCCcEEEe
Q psy15417 140 ----------------------------------------RAGILAGHDNRVSCLGVTEDG----MAVATGSWDSFLRIW 175 (176)
Q Consensus 140 ----------------------------------------~~~~~~~~~~~i~~~~~~~~~----~~l~tg~~d~~v~vw 175 (176)
....+.+|...|.+++|+|++ .+|++|+.|+.|++|
T Consensus 166 ~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iw 245 (351)
T 3f3f_A 166 HLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIF 245 (351)
T ss_dssp CSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEE
T ss_pred cccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEE
Confidence 133455788899999999998 899999999999999
Q ss_pred C
Q psy15417 176 N 176 (176)
Q Consensus 176 d 176 (176)
|
T Consensus 246 d 246 (351)
T 3f3f_A 246 K 246 (351)
T ss_dssp E
T ss_pred e
Confidence 6
No 36
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.1e-29 Score=188.75 Aligned_cols=167 Identities=20% Similarity=0.233 Sum_probs=145.8
Q ss_pred cCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEe
Q psy15417 10 LLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF 89 (176)
Q Consensus 10 ~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw 89 (176)
.+....+.||.+.|.+++|+|++.+|++|+.||.|++||+.+++....+.+|..+|.+++|+|++++|++++.|+.|++|
T Consensus 22 ~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw 101 (369)
T 3zwl_B 22 HMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLW 101 (369)
T ss_dssp SEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred ccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 33444578999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCeeeEEeecceE---------------------------------------------------------eceEEE
Q psy15417 90 DIRADQELAMYSHDNII---------------------------------------------------------CGITSV 112 (176)
Q Consensus 90 d~~~~~~~~~~~~~~~~---------------------------------------------------------~~v~~~ 112 (176)
|+++++.+..+...... ..+.++
T Consensus 102 d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (369)
T 3zwl_B 102 DVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA 181 (369)
T ss_dssp ETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE
T ss_pred ECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE
Confidence 99876544332211000 057788
Q ss_pred EECCCCcEEEEEcCCCeEEEEeCCC-ceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 113 AFSRSGRLLLAGYDDFNCNVWDSMK-TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 113 ~~~~~~~~l~~g~~d~~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
+|+|++..+++++.++.+++||+.. .+....+..|...|.+++|+|++.+|++++.|+.|++||
T Consensus 182 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d 246 (369)
T 3zwl_B 182 GWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVD 246 (369)
T ss_dssp EECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEE
Confidence 8999999999999999999999888 678888888999999999999999999999999999996
No 37
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=9.9e-30 Score=187.55 Aligned_cols=175 Identities=19% Similarity=0.375 Sum_probs=141.4
Q ss_pred CccccccccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec----------------------
Q psy15417 2 CDHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP---------------------- 59 (176)
Q Consensus 2 ~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~---------------------- 59 (176)
+|+.+++..+....+.+|...|.+++|+|++++|++|+.||+|++||+++++++..+.
T Consensus 49 iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~ 128 (318)
T 4ggc_A 49 LWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRS 128 (318)
T ss_dssp EEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETT
T ss_pred EEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecC
Confidence 3566666666665677899999999999999999999999999999999887655443
Q ss_pred -------------------CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeee----EE-eec------------
Q psy15417 60 -------------------GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA----MY-SHD------------ 103 (176)
Q Consensus 60 -------------------~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~----~~-~~~------------ 103 (176)
+|...+..+.+.++++++++++.|++|++||+++++... .. ...
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 208 (318)
T 4ggc_A 129 GHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQ 208 (318)
T ss_dssp SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTS
T ss_pred CceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCC
Confidence 456667788888999999999999999999987543110 00 000
Q ss_pred -----------------------------ceEeceEEEEECCCCcEEEEE--cCCCeEEEEeCCCceeeeeecCCCccEE
Q psy15417 104 -----------------------------NIICGITSVAFSRSGRLLLAG--YDDFNCNVWDSMKTERAGILAGHDNRVS 152 (176)
Q Consensus 104 -----------------------------~~~~~v~~~~~~~~~~~l~~g--~~d~~i~v~d~~~~~~~~~~~~~~~~i~ 152 (176)
.....+..+.|+|++..++++ +.|+.|++||+.+++++..+.+|.+.|.
T Consensus 209 ~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~ 288 (318)
T 4ggc_A 209 SNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVL 288 (318)
T ss_dssp TTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEE
T ss_pred CcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEE
Confidence 000135677888888876654 4899999999999999999999999999
Q ss_pred EEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 153 CLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 153 ~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
+++|+|++.+|+|||.|++|+|||
T Consensus 289 ~l~~spdg~~l~S~s~D~~v~iWd 312 (318)
T 4ggc_A 289 SLTMSPDGATVASAAADETLRLWR 312 (318)
T ss_dssp EEEECTTSSCEEEEETTTEEEEEC
T ss_pred EEEEcCCCCEEEEEecCCeEEEEE
Confidence 999999999999999999999997
No 38
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.97 E-value=4.3e-30 Score=194.25 Aligned_cols=159 Identities=21% Similarity=0.278 Sum_probs=136.9
Q ss_pred ccCCCccCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEe--cCCCCCeeEEEEccC-CcEEEEeeCCCcEEEee
Q psy15417 15 AASGHTGDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTF--PGHESDINAVTFFPN-GWAFATGSDDATCRLFD 90 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~--~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd 90 (176)
.+.+|...|++++|++++. ++++++.||+|++||+++++....+ ..|...+.+++|+|+ +.+|++++.|+.|++||
T Consensus 176 ~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd 255 (357)
T 4g56_B 176 SYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVN 255 (357)
T ss_dssp EECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEE
T ss_pred EEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEE
Confidence 4678999999999999875 8899999999999999998766554 446788999999997 57899999999999999
Q ss_pred CCCCCeeeEEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeC-CCCEEEEccC
Q psy15417 91 IRADQELAMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTE-DGMAVATGSW 168 (176)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~tg~~ 168 (176)
+++++.+..+.. +...|.+++|+|++ .+|++|+.|++|+|||+..++.+..+ +|.+.|.+++|+| ++.+|++|+.
T Consensus 256 ~~~~~~~~~~~~--~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~ 332 (357)
T 4g56_B 256 IKNPDSAQTSAV--HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGW 332 (357)
T ss_dssp SSCGGGCEEECC--CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEET
T ss_pred CCCCcEeEEEec--cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcC
Confidence 998877655432 23468899999987 57899999999999999888776554 7999999999998 7899999999
Q ss_pred CCcEEEeC
Q psy15417 169 DSFLRIWN 176 (176)
Q Consensus 169 d~~v~vwd 176 (176)
|++|++||
T Consensus 333 Dg~v~iW~ 340 (357)
T 4g56_B 333 DHKVLHHH 340 (357)
T ss_dssp TSCEEEEE
T ss_pred CCeEEEEE
Confidence 99999996
No 39
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=1.4e-29 Score=193.47 Aligned_cols=161 Identities=26% Similarity=0.458 Sum_probs=138.9
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRA 93 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~ 93 (176)
.+.+|...|.+++|+|++.+|++|+.|++|++||++++++...+. +...+.+++|+| ++.++++++.|+.|++||+++
T Consensus 160 ~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~ 238 (393)
T 1erj_A 160 ILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET 238 (393)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTT
T ss_pred EEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 367899999999999999999999999999999999999888776 556799999999 899999999999999999988
Q ss_pred CCeeeEEee-----cceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc------------eeeeeecCCCccEEEEEE
Q psy15417 94 DQELAMYSH-----DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT------------ERAGILAGHDNRVSCLGV 156 (176)
Q Consensus 94 ~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~------------~~~~~~~~~~~~i~~~~~ 156 (176)
+..+..... ..+...|.+++|+|++.++++|+.|+++++||+... .+...+.+|...|.+++|
T Consensus 239 ~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 318 (393)
T 1erj_A 239 GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVAT 318 (393)
T ss_dssp CCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEE
T ss_pred CcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEE
Confidence 766544321 223346889999999999999999999999997653 234567789999999999
Q ss_pred eCCCCEEEEccCCCcEEEeC
Q psy15417 157 TEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 157 ~~~~~~l~tg~~d~~v~vwd 176 (176)
+|++.+|++|+.|+.|++||
T Consensus 319 ~~~~~~l~sgs~D~~v~iwd 338 (393)
T 1erj_A 319 TQNDEYILSGSKDRGVLFWD 338 (393)
T ss_dssp CGGGCEEEEEETTSEEEEEE
T ss_pred CCCCCEEEEEeCCCeEEEEE
Confidence 99999999999999999996
No 40
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=3.7e-31 Score=196.84 Aligned_cols=162 Identities=21% Similarity=0.348 Sum_probs=136.2
Q ss_pred ccCCCccCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCe--eeeEecCCCCCeeEEEEccC--CcEEEEeeCCCcEEE
Q psy15417 15 AASGHTGDVMSLSLAP--DMRTFVSGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFPN--GWAFATGSDDATCRL 88 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~--~~~~l~s~s~dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~d~~i~i 88 (176)
.+.||.+.|.+++|++ ++.+|++|+.|++|++||+++++ ....+.+|..+|++++|+|+ +..|++++.|++|++
T Consensus 52 ~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~l 131 (316)
T 3bg1_A 52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISL 131 (316)
T ss_dssp EEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEE
T ss_pred EEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEE
Confidence 4679999999999986 48899999999999999999873 56778899999999999998 789999999999999
Q ss_pred eeCCCCCeeeE-EeecceEeceEEEEECCC-----------------CcEEEEEcCCCeEEEEeCCCc---eeeeeecCC
Q psy15417 89 FDIRADQELAM-YSHDNIICGITSVAFSRS-----------------GRLLLAGYDDFNCNVWDSMKT---ERAGILAGH 147 (176)
Q Consensus 89 wd~~~~~~~~~-~~~~~~~~~v~~~~~~~~-----------------~~~l~~g~~d~~i~v~d~~~~---~~~~~~~~~ 147 (176)
||++....... .....+...+.++.|+|+ +.+|++|+.|++|++||+... +....+.+|
T Consensus 132 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h 211 (316)
T 3bg1_A 132 LTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAH 211 (316)
T ss_dssp EEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCC
T ss_pred EecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccC
Confidence 99986533211 112223345778899987 368999999999999998644 466678899
Q ss_pred CccEEEEEEeCCC----CEEEEccCCCcEEEeC
Q psy15417 148 DNRVSCLGVTEDG----MAVATGSWDSFLRIWN 176 (176)
Q Consensus 148 ~~~i~~~~~~~~~----~~l~tg~~d~~v~vwd 176 (176)
...|.+++|+|++ .+|++|+.|++|++||
T Consensus 212 ~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~ 244 (316)
T 3bg1_A 212 SDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244 (316)
T ss_dssp SSCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred CCceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence 9999999999986 7899999999999995
No 41
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=4.6e-30 Score=196.39 Aligned_cols=161 Identities=20% Similarity=0.370 Sum_probs=141.2
Q ss_pred cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417 16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 95 (176)
+.+|.+.|.+++|+|++.+|++|+.|++|++||+++++....+.+|..+|.+++|+|++..|++++.|++|++||+++++
T Consensus 135 ~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 135 DQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp TTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred cccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred eeeEEeec-ceE---------------------eceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec-CCCccEE
Q psy15417 96 ELAMYSHD-NII---------------------CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA-GHDNRVS 152 (176)
Q Consensus 96 ~~~~~~~~-~~~---------------------~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~-~~~~~i~ 152 (176)
.+..+... .+. ..+.++.|+|++.++++|+.|+.+++||+..++....+. .|...+.
T Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 294 (420)
T 3vl1_A 215 TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCN 294 (420)
T ss_dssp EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEE
T ss_pred eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCce
Confidence 66555321 111 233445678999999999999999999998887666654 5788999
Q ss_pred EEEEeCCCC-EEEEccCCCcEEEeC
Q psy15417 153 CLGVTEDGM-AVATGSWDSFLRIWN 176 (176)
Q Consensus 153 ~~~~~~~~~-~l~tg~~d~~v~vwd 176 (176)
+++|+|++. +|++|+.|+.|++||
T Consensus 295 ~~~~~~~~~~~l~~g~~dg~i~vwd 319 (420)
T 3vl1_A 295 SLTVDGNNANYIYAGYENGMLAQWD 319 (420)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEE
T ss_pred eEEEeCCCCCEEEEEeCCCeEEEEE
Confidence 999999998 999999999999996
No 42
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=2.9e-30 Score=199.56 Aligned_cols=160 Identities=23% Similarity=0.242 Sum_probs=134.8
Q ss_pred cCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCee--eeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeC
Q psy15417 16 ASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSC--KQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDI 91 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~--~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~ 91 (176)
..+|...|+|++|+| ++.+|++|+.||+|++||+.+++. ...+.+|.++|++++|+| ++.+|++++.|++|++||+
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~ 194 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDF 194 (435)
T ss_dssp EEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEET
T ss_pred CCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeec
Confidence 456889999999999 567999999999999999987754 445668999999999998 6889999999999999999
Q ss_pred CCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCC-EEEEccCCC
Q psy15417 92 RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM-AVATGSWDS 170 (176)
Q Consensus 92 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~tg~~d~ 170 (176)
++...............+.+++|+|++.++++|+.|+.|++||+. ++.+..+.+|...|.+++|+|++. +|++|+.|+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~ 273 (435)
T 4e54_B 195 KGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQ 273 (435)
T ss_dssp TSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTS
T ss_pred cCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcc
Confidence 765443333333333346789999999999999999999999974 566777889999999999999875 788999999
Q ss_pred cEEEeC
Q psy15417 171 FLRIWN 176 (176)
Q Consensus 171 ~v~vwd 176 (176)
+|++||
T Consensus 274 ~v~iwd 279 (435)
T 4e54_B 274 TVKIWD 279 (435)
T ss_dssp BCCEEE
T ss_pred eeeEEe
Confidence 999996
No 43
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.6e-30 Score=196.57 Aligned_cols=160 Identities=20% Similarity=0.206 Sum_probs=130.9
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe---eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS---CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI 91 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~---~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~ 91 (176)
.+.+|.+.|.+++|+|++.+|++++.|++|++||+.+++ ....+.+|...|.+++|+|+++.|++++.|+.|++||+
T Consensus 50 ~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 129 (377)
T 3dwl_C 50 TFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYF 129 (377)
T ss_dssp CBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC
T ss_pred EEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEE
Confidence 467899999999999999999999999999999999877 67778889999999999999999999999999999999
Q ss_pred CCCCe---eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCC------------------CceeeeeecCCCcc
Q psy15417 92 RADQE---LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM------------------KTERAGILAGHDNR 150 (176)
Q Consensus 92 ~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~------------------~~~~~~~~~~~~~~ 150 (176)
+.++. ...... .+...+.+++|+|++.++++++.|+++++||+. .+++...+ +|...
T Consensus 130 ~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 207 (377)
T 3dwl_C 130 EQENDWWVSKHLKR-PLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGW 207 (377)
T ss_dssp -----CCCCEEECS-SCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSS
T ss_pred CCcccceeeeEeec-ccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCce
Confidence 87653 222221 134578999999999999999999999999974 24455566 89999
Q ss_pred EEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 151 VSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 151 i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
|.+++|+|++.+|++|+.|+.|++||
T Consensus 208 v~~~~~sp~~~~l~~~~~d~~i~iwd 233 (377)
T 3dwl_C 208 VHAVGFSPSGNALAYAGHDSSVTIAY 233 (377)
T ss_dssp EEEEEECTTSSCEEEEETTTEEC-CE
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 99999999999999999999999996
No 44
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-30 Score=205.96 Aligned_cols=160 Identities=16% Similarity=0.060 Sum_probs=137.5
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe-eeeEecCCCCCeeEE--EEccCC-cEEEEeeCCCcEEEee
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS-CKQTFPGHESDINAV--TFFPNG-WAFATGSDDATCRLFD 90 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~-~~~~~~~h~~~v~~v--~~~~~~-~~l~s~s~d~~i~iwd 90 (176)
.+.+|...|++++|+++ ..|++|+.||+|++||+++++ ....+.+|..+|+++ .|.|++ .+|++++.|++|++||
T Consensus 261 ~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD 339 (524)
T 2j04_B 261 TLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFN 339 (524)
T ss_dssp EECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEEC
T ss_pred EEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEE
Confidence 46789999999999986 489999999999999999764 455789999999999 567777 8999999999999999
Q ss_pred CCCCCeeeEEe-ecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCC
Q psy15417 91 IRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWD 169 (176)
Q Consensus 91 ~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d 169 (176)
+++.+....+. +.. ...+.+++|+|++..+++++.|+++++||+..+.....+.+|.+.|.+++|+|++.+|++|+.|
T Consensus 340 ~~~~~~~~~~~~~~~-~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~D 418 (524)
T 2j04_B 340 PKDIATTKTTVSRFR-GSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSAD 418 (524)
T ss_dssp GGGHHHHCEEEEECS-CCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETT
T ss_pred CCCCCcccccccccc-cCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECC
Confidence 98766543332 211 1136679999999999999999999999998887777788999999999999999999999999
Q ss_pred CcEEEeC
Q psy15417 170 SFLRIWN 176 (176)
Q Consensus 170 ~~v~vwd 176 (176)
++|++||
T Consensus 419 gtv~lwd 425 (524)
T 2j04_B 419 GSLIITN 425 (524)
T ss_dssp TEEECCB
T ss_pred CEEEEEe
Confidence 9999996
No 45
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=2e-29 Score=192.67 Aligned_cols=162 Identities=22% Similarity=0.357 Sum_probs=144.4
Q ss_pred ccCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCC-------eeeeEecCCCCCeeEEEEccCC-cEEEEeeCCCc
Q psy15417 15 AASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDG-------SCKQTFPGHESDINAVTFFPNG-WAFATGSDDAT 85 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~-------~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~d~~ 85 (176)
.+.+|.+.|.+++|+| ++.+|++|+.||+|++||+.++ +....+.+|...|.+++|+|++ +.|++++.|+.
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~ 155 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNV 155 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSC
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCE
Confidence 3678999999999999 8999999999999999999987 5678899999999999999997 69999999999
Q ss_pred EEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeee-cCCCcc-EEEEEEeCCCCEE
Q psy15417 86 CRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL-AGHDNR-VSCLGVTEDGMAV 163 (176)
Q Consensus 86 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~-~~~~~~-i~~~~~~~~~~~l 163 (176)
|++||+++++.+..+....+...+.+++|+|++.++++++.|+.+++||+..++.+..+ ..|.+. +.+++|+|++.+|
T Consensus 156 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 235 (402)
T 2aq5_A 156 ILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKIL 235 (402)
T ss_dssp EEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEE
T ss_pred EEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEE
Confidence 99999998776655421333457899999999999999999999999999998888887 678765 8899999999999
Q ss_pred EEc---cCCCcEEEeC
Q psy15417 164 ATG---SWDSFLRIWN 176 (176)
Q Consensus 164 ~tg---~~d~~v~vwd 176 (176)
++| +.|+.|++||
T Consensus 236 ~~g~~~~~d~~i~iwd 251 (402)
T 2aq5_A 236 TTGFSRMSERQVALWD 251 (402)
T ss_dssp EEEECTTCCEEEEEEE
T ss_pred EEeccCCCCceEEEEc
Confidence 999 8999999996
No 46
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=6.6e-30 Score=190.50 Aligned_cols=157 Identities=8% Similarity=0.092 Sum_probs=119.7
Q ss_pred CCccCeEEEEEcC---CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCC---CCeeEEEEccCCcEE------------EE
Q psy15417 18 GHTGDVMSLSLAP---DMRTFVSGACDASAKLWDIRDGSCKQTFPGHE---SDINAVTFFPNGWAF------------AT 79 (176)
Q Consensus 18 gh~~~V~~~~~~~---~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~---~~v~~v~~~~~~~~l------------~s 79 (176)
+|...+..++|++ ++.+|++|+.|++|++||+++++++.++.+|. ..|.+++|+|++..+ ++
T Consensus 176 ~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laS 255 (356)
T 2w18_A 176 LMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESL 255 (356)
T ss_dssp ECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC----------
T ss_pred cCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeec
Confidence 4555555555555 45678899999999999999999999998754 467788999999876 67
Q ss_pred eeCCCcEEEeeCCCCCeeeEEee---cceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEE-EEE
Q psy15417 80 GSDDATCRLFDIRADQELAMYSH---DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVS-CLG 155 (176)
Q Consensus 80 ~s~d~~i~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~-~~~ 155 (176)
|+.|+++++||..++..+..... ..+...+.+. +.++..+++|+.|++|+|||+.+++.+.++.+|...+. +++
T Consensus 256 Gs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg--~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~va 333 (356)
T 2w18_A 256 RSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEG--DVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVK 333 (356)
T ss_dssp --CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEE--EEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEE
T ss_pred cCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcc--ccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEE
Confidence 88999999999988776543321 1221122222 33467899999999999999999999999998987654 589
Q ss_pred EeCCCCEEEEccCCCcEEEeC
Q psy15417 156 VTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 156 ~~~~~~~l~tg~~d~~v~vwd 176 (176)
|+|+|.+|++|+.|++|||||
T Consensus 334 fSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 334 WSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp ECSSSSEEEEECTTSCEEEEE
T ss_pred ECCCCCEEEEEECCCcEEEec
Confidence 999999999999999999996
No 47
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=2.2e-29 Score=186.67 Aligned_cols=161 Identities=20% Similarity=0.299 Sum_probs=138.7
Q ss_pred cCCCccCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCC---------eeeeEecCCCCCeeEEEEccC--CcEEEEeeC
Q psy15417 16 ASGHTGDVMSLSLAP--DMRTFVSGACDASAKLWDIRDG---------SCKQTFPGHESDINAVTFFPN--GWAFATGSD 82 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~--~~~~l~s~s~dg~v~~wd~~~~---------~~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~ 82 (176)
+.+|.+.|.+++|+| ++.+|++|+.||+|++||++++ +....+.+|..+|.+++|+|+ +..+++++.
T Consensus 53 ~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 132 (351)
T 3f3f_A 53 WRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN 132 (351)
T ss_dssp EECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred eccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC
Confidence 568999999999999 6999999999999999999887 567888999999999999999 999999999
Q ss_pred CCcEEEeeCCCCCeee----------------------------------------------------------EEeecc
Q psy15417 83 DATCRLFDIRADQELA----------------------------------------------------------MYSHDN 104 (176)
Q Consensus 83 d~~i~iwd~~~~~~~~----------------------------------------------------------~~~~~~ 104 (176)
|+.|++||+++.+.+. ......
T Consensus 133 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (351)
T 3f3f_A 133 DGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPG 212 (351)
T ss_dssp TCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCC
T ss_pred CCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCC
Confidence 9999999987543211 111112
Q ss_pred eEeceEEEEECCCC----cEEEEEcCCCeEEEEeCCCc------------------------------------------
Q psy15417 105 IICGITSVAFSRSG----RLLLAGYDDFNCNVWDSMKT------------------------------------------ 138 (176)
Q Consensus 105 ~~~~v~~~~~~~~~----~~l~~g~~d~~i~v~d~~~~------------------------------------------ 138 (176)
+...|.+++|+|++ .++++|+.|+.|++||+...
T Consensus 213 h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (351)
T 3f3f_A 213 HKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQS 292 (351)
T ss_dssp CCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CC
T ss_pred CCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecc
Confidence 33468899999998 89999999999999997653
Q ss_pred ----eeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 139 ----ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 139 ----~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
+.+..+.+|...|.+++|+|++.+|++|+.|+.|++||
T Consensus 293 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~ 334 (351)
T 3f3f_A 293 NLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWK 334 (351)
T ss_dssp SEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEE
T ss_pred cccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence 56667788999999999999999999999999999996
No 48
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=9.8e-29 Score=183.75 Aligned_cols=162 Identities=21% Similarity=0.345 Sum_probs=136.2
Q ss_pred ccCCCccCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCe-----eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEE
Q psy15417 15 AASGHTGDVMSLSLAPD-MRTFVSGACDASAKLWDIRDGS-----CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRL 88 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~~-----~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~i 88 (176)
.+.||++.|++++|+|+ +++|+||+.|++|++||+++.+ +...+++|..+|.+++|+|+++++++++.|+.+++
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~ 112 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRL 112 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceE
Confidence 37899999999999997 6899999999999999997643 56788999999999999999999999999999999
Q ss_pred eeCCCCCeeeEEee-----------------------------------------cceEeceEEEEECCCC--cEEEEEc
Q psy15417 89 FDIRADQELAMYSH-----------------------------------------DNIICGITSVAFSRSG--RLLLAGY 125 (176)
Q Consensus 89 wd~~~~~~~~~~~~-----------------------------------------~~~~~~v~~~~~~~~~--~~l~~g~ 125 (176)
|+............ ..+...+..+.|++++ .++++++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~ 192 (340)
T 4aow_A 113 WDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG 192 (340)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEE
T ss_pred EeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEc
Confidence 99765422111100 0011235677787764 5788899
Q ss_pred CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 126 DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 126 ~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
.|+.+++||+...+....+.+|...|.+++|+|++.+|++|+.|+.|++||
T Consensus 193 ~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd 243 (340)
T 4aow_A 193 WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 243 (340)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred CCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 999999999999999999999999999999999999999999999999996
No 49
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=3.7e-29 Score=189.69 Aligned_cols=161 Identities=19% Similarity=0.152 Sum_probs=140.8
Q ss_pred ccCCCccCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCeeeeEec--CCCCCeeEEEEcc-CCcEEEEeeCCCcEEEee
Q psy15417 15 AASGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTFP--GHESDINAVTFFP-NGWAFATGSDDATCRLFD 90 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd 90 (176)
.+.+|.+.|.+++|+|++ .+|++|+.||.|++||+.+++....+. +|...|.+++|+| ++..|++++.|+.|++||
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 147 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRD 147 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEE
Confidence 357899999999999998 899999999999999999887776665 6999999999999 789999999999999999
Q ss_pred CCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCC-EEEEccCC
Q psy15417 91 IRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM-AVATGSWD 169 (176)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~tg~~d 169 (176)
+++...........+...+.+++|+|++.++++|+.|+.+++||+ +++....+.+|...|.+++|+|++. +|++|+.|
T Consensus 148 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 226 (383)
T 3ei3_B 148 FSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVD 226 (383)
T ss_dssp TTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETT
T ss_pred CCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCC
Confidence 986332222223323346889999999999999999999999997 6778888889999999999999998 99999999
Q ss_pred CcEEEeC
Q psy15417 170 SFLRIWN 176 (176)
Q Consensus 170 ~~v~vwd 176 (176)
+.|++||
T Consensus 227 ~~i~iwd 233 (383)
T 3ei3_B 227 ATVKLWD 233 (383)
T ss_dssp SEEEEEE
T ss_pred CEEEEEe
Confidence 9999996
No 50
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.1e-29 Score=188.63 Aligned_cols=162 Identities=19% Similarity=0.260 Sum_probs=141.4
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcC--CCeeeeEecCCCCCeeEEEEccC--CcEEEEeeCCCcEEEee
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIR--DGSCKQTFPGHESDINAVTFFPN--GWAFATGSDDATCRLFD 90 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~--~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~d~~i~iwd 90 (176)
.+.||.+.|.+++|+|++.+|++|+.||.|++||+. +++....+.+|..+|++++|+|+ +.+|++++.|+.|++||
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd 85 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 85 (379)
T ss_dssp CEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred EecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEE
Confidence 567899999999999999999999999999999998 55678889999999999999877 89999999999999999
Q ss_pred CCCCCeeeEEeecceEeceEEEEECCC--CcEEEEEcCCCeEEEEeCCCce--eeeeecCCCccEEEEEEeC--------
Q psy15417 91 IRADQELAMYSHDNIICGITSVAFSRS--GRLLLAGYDDFNCNVWDSMKTE--RAGILAGHDNRVSCLGVTE-------- 158 (176)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~g~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~-------- 158 (176)
+++++.........+...+.++.|+|+ +.++++++.|+.+++||+.... ....+..|...|.+++|+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 165 (379)
T 3jrp_A 86 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 165 (379)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC------
T ss_pred cCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccccc
Confidence 988753333333333457899999999 9999999999999999987763 3445668899999999999
Q ss_pred -----CCCEEEEccCCCcEEEeC
Q psy15417 159 -----DGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 159 -----~~~~l~tg~~d~~v~vwd 176 (176)
++.+|++|+.|+.|++||
T Consensus 166 ~~~~~~~~~l~~~~~dg~i~i~d 188 (379)
T 3jrp_A 166 HNGTKESRKFVTGGADNLVKIWK 188 (379)
T ss_dssp ----CTTCEEEEEETTSCEEEEE
T ss_pred ccCCCCCCEEEEEeCCCeEEEEE
Confidence 689999999999999996
No 51
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=3.9e-29 Score=192.33 Aligned_cols=175 Identities=19% Similarity=0.361 Sum_probs=137.1
Q ss_pred CccccccccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec----------------------
Q psy15417 2 CDHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP---------------------- 59 (176)
Q Consensus 2 ~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~---------------------- 59 (176)
+||.+++..+....+.+|...|++++|+|++.+|++|+.||+|++||+++++++..+.
T Consensus 129 lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d 208 (420)
T 4gga_A 129 LWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRS 208 (420)
T ss_dssp EEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETT
T ss_pred EEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCC
Confidence 3556666666555667899999999999999999999999999999998887655544
Q ss_pred -------------------CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe--------------ee--------
Q psy15417 60 -------------------GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE--------------LA-------- 98 (176)
Q Consensus 60 -------------------~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~--------------~~-------- 98 (176)
+|...+..+.+.|++..+++++.|+.+++|+...++. +.
T Consensus 209 ~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~ 288 (420)
T 4gga_A 209 GHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQ 288 (420)
T ss_dssp SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTC
T ss_pred CceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCc
Confidence 4555566677777778888888888888888653210 00
Q ss_pred ----------------EEeec--------ceEeceEEEEECCCCcEEEEEc--CCCeEEEEeCCCceeeeeecCCCccEE
Q psy15417 99 ----------------MYSHD--------NIICGITSVAFSRSGRLLLAGY--DDFNCNVWDSMKTERAGILAGHDNRVS 152 (176)
Q Consensus 99 ----------------~~~~~--------~~~~~v~~~~~~~~~~~l~~g~--~d~~i~v~d~~~~~~~~~~~~~~~~i~ 152 (176)
.+... .....+.++.|+|++..+++++ .|+.|++||..+++++..+.+|...|.
T Consensus 289 ~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~ 368 (420)
T 4gga_A 289 SNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVL 368 (420)
T ss_dssp TTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEE
T ss_pred ccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEE
Confidence 00000 0012366788999998877654 789999999999999999999999999
Q ss_pred EEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 153 CLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 153 ~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
+++|+|+|.+|+||+.|++|++||
T Consensus 369 ~l~~spdg~~l~S~s~D~tvriWd 392 (420)
T 4gga_A 369 SLTMSPDGATVASAAADETLRLWR 392 (420)
T ss_dssp EEEECTTSSCEEEEETTTEEEEEC
T ss_pred EEEEcCCCCEEEEEecCCeEEEEE
Confidence 999999999999999999999997
No 52
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.2e-30 Score=197.32 Aligned_cols=161 Identities=14% Similarity=0.129 Sum_probs=133.2
Q ss_pred cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC--eeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417 16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG--SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA 93 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~--~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 93 (176)
...|.++|++++|+|++.+|++|+.|+.|++||+.++ ++...+.+|..+|.+++|+|++++|++++.|++|++||+.+
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 3446789999999999999999999999999999988 78889999999999999999999999999999999999987
Q ss_pred CC-eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCce---eeeeecC-CCccEEEEEEeCCCCEEEEccC
Q psy15417 94 DQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTE---RAGILAG-HDNRVSCLGVTEDGMAVATGSW 168 (176)
Q Consensus 94 ~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~---~~~~~~~-~~~~i~~~~~~~~~~~l~tg~~ 168 (176)
++ .........+...+.++.|+|++.++++++.|+.+++||+...+ ....+.. |...|.+++|+|++.+|++|+.
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence 65 11122222334578999999999999999999999999988766 3566666 9999999999999999999999
Q ss_pred CCcEEEeC
Q psy15417 169 DSFLRIWN 176 (176)
Q Consensus 169 d~~v~vwd 176 (176)
|+.|++||
T Consensus 167 d~~i~iwd 174 (377)
T 3dwl_C 167 DRKAYVLS 174 (377)
T ss_dssp SSCEEEEE
T ss_pred CCEEEEEE
Confidence 99999996
No 53
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=9e-30 Score=196.76 Aligned_cols=171 Identities=14% Similarity=0.173 Sum_probs=137.3
Q ss_pred ccccccccCCCcccCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecCC--CCCeeEEEEccCCcEEEE
Q psy15417 3 DHLDKSALLGSPAASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGH--ESDINAVTFFPNGWAFAT 79 (176)
Q Consensus 3 ~~~~~~~~~~~~~~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h--~~~v~~v~~~~~~~~l~s 79 (176)
|++++........+.||.+.|++++|+| ++.+|++|+.||+|++||++++........+ ...+.+++|+|++.+|++
T Consensus 147 Wd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 226 (435)
T 4e54_B 147 WNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVT 226 (435)
T ss_dssp ECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEE
T ss_pred EECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEE
Confidence 4554444444445679999999999998 6889999999999999999877554444333 356789999999999999
Q ss_pred eeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCceeee---eecCCCccEEEEE
Q psy15417 80 GSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKTERAG---ILAGHDNRVSCLG 155 (176)
Q Consensus 80 ~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~~~~~---~~~~~~~~i~~~~ 155 (176)
|+.|+.|++||++.... .. ...+...|.+++|+|++. ++++|+.|++|++||+...+... ...+|...|.+++
T Consensus 227 g~~dg~i~~wd~~~~~~-~~--~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 303 (435)
T 4e54_B 227 GDNVGNVILLNMDGKEL-WN--LRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAAC 303 (435)
T ss_dssp ECSSSBEEEEESSSCBC-CC--SBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECC
T ss_pred EeCCCcEeeeccCccee-EE--EecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeecccccccee
Confidence 99999999999875432 22 222335688999999976 78899999999999987655433 3357899999999
Q ss_pred EeCCCCEEEEccCCCcEEEeC
Q psy15417 156 VTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 156 ~~~~~~~l~tg~~d~~v~vwd 176 (176)
|+|++.+|++|+.|++|+|||
T Consensus 304 ~spdg~~l~s~~~D~~i~iwd 324 (435)
T 4e54_B 304 FSPDGARLLTTDQKSEIRVYS 324 (435)
T ss_dssp BCTTSSEEEEEESSSCEEEEE
T ss_pred ECCCCCeeEEEcCCCEEEEEE
Confidence 999999999999999999996
No 54
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=7.4e-29 Score=186.48 Aligned_cols=161 Identities=12% Similarity=0.105 Sum_probs=141.3
Q ss_pred cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe--eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417 16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA 93 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 93 (176)
+..|.++|.+++|+|++.+|++++.|+.|++||+.+++ ....+.+|..+|.+++|+|++..+++++.|+.|++||+++
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 45599999999999999999999999999999999987 8889999999999999999999999999999999999987
Q ss_pred CCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCce----eeeeecCCCccEEEEEEeCCCCEEEEccCC
Q psy15417 94 DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTE----RAGILAGHDNRVSCLGVTEDGMAVATGSWD 169 (176)
Q Consensus 94 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d 169 (176)
.+.........+...+.++.|+|++.++++++.|+.+++||+...+ .......|...|.+++|+|++.+|++|+.|
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 7644443333334578899999999999999999999999987654 223335788899999999999999999999
Q ss_pred CcEEEeC
Q psy15417 170 SFLRIWN 176 (176)
Q Consensus 170 ~~v~vwd 176 (176)
+.|++||
T Consensus 164 g~i~~~d 170 (372)
T 1k8k_C 164 FKCRIFS 170 (372)
T ss_dssp SCEEEEE
T ss_pred CCEEEEE
Confidence 9999996
No 55
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.5e-29 Score=187.27 Aligned_cols=162 Identities=20% Similarity=0.318 Sum_probs=141.8
Q ss_pred ccCCCccCeEEEEEcCC--CCEEEEEeCCCeEEEEEcCCCe--eeeEecCCCCCeeEEEEccC--CcEEEEeeCCCcEEE
Q psy15417 15 AASGHTGDVMSLSLAPD--MRTFVSGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFPN--GWAFATGSDDATCRL 88 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~--~~~l~s~s~dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~d~~i~i 88 (176)
.+.+|.+.|.+++|+++ +.+|++|+.||.|++||+++++ ....+..|..+|.+++|+|+ +..+++++.|+.|++
T Consensus 50 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v 129 (379)
T 3jrp_A 50 TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSV 129 (379)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred EecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEE
Confidence 46789999999999987 8999999999999999999987 77888899999999999999 999999999999999
Q ss_pred eeCCCCCeeeEEeecceEeceEEEEECC-------------CCcEEEEEcCCCeEEEEeCCCce----eeeeecCCCccE
Q psy15417 89 FDIRADQELAMYSHDNIICGITSVAFSR-------------SGRLLLAGYDDFNCNVWDSMKTE----RAGILAGHDNRV 151 (176)
Q Consensus 89 wd~~~~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~l~~g~~d~~i~v~d~~~~~----~~~~~~~~~~~i 151 (176)
||++............+...+.++.|+| ++..+++++.|+.|++||+.... ....+.+|...|
T Consensus 130 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v 209 (379)
T 3jrp_A 130 VEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV 209 (379)
T ss_dssp EECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE
T ss_pred EecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcE
Confidence 9998775443333333345788999999 68999999999999999976543 445677899999
Q ss_pred EEEEEeCC---CCEEEEccCCCcEEEeC
Q psy15417 152 SCLGVTED---GMAVATGSWDSFLRIWN 176 (176)
Q Consensus 152 ~~~~~~~~---~~~l~tg~~d~~v~vwd 176 (176)
.+++|+|+ +.+|++++.|+.|++||
T Consensus 210 ~~~~~sp~~~~~~~l~s~~~dg~i~iwd 237 (379)
T 3jrp_A 210 RDVAWSPTVLLRSYLASVSQDRTCIIWT 237 (379)
T ss_dssp EEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred eEEEECCCCCCCCeEEEEeCCCEEEEEe
Confidence 99999999 89999999999999996
No 56
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=1.8e-28 Score=194.50 Aligned_cols=157 Identities=30% Similarity=0.539 Sum_probs=140.3
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
.+.+|...|.+++|+|++++|++++.|+.|++||. +++....+.+|..+|.+++|+|+++.+++++.|+++++||.. .
T Consensus 380 ~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~ 457 (577)
T 2ymu_A 380 TLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-G 457 (577)
T ss_dssp EEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-S
T ss_pred EecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-C
Confidence 35689999999999999999999999999999995 567788999999999999999999999999999999999964 3
Q ss_pred CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417 95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 174 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v 174 (176)
+.+.... .+...+.+++|+|+++++++++.|++|++|| .+++.+..+.+|...|.+++|+|++.+|++++.|+.|++
T Consensus 458 ~~~~~~~--~~~~~v~~~~~spd~~~las~~~d~~i~iw~-~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~l 534 (577)
T 2ymu_A 458 QLLQTLT--GHSSSVRGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKL 534 (577)
T ss_dssp CEEEEEE--CCSSCEEEEEECTTSCEEEEEETTSEEEEEE-TTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred CEEEEEc--CCCCCEEEEEEcCCCCEEEEEeCCCEEEEEc-CCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEE
Confidence 4333322 2334688999999999999999999999999 567888889999999999999999999999999999999
Q ss_pred eC
Q psy15417 175 WN 176 (176)
Q Consensus 175 wd 176 (176)
||
T Consensus 535 wd 536 (577)
T 2ymu_A 535 WN 536 (577)
T ss_dssp EC
T ss_pred Ee
Confidence 97
No 57
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=4.6e-28 Score=179.58 Aligned_cols=158 Identities=22% Similarity=0.374 Sum_probs=143.9
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
.+.+|...|.+++|+|++.++++++.||.|++||+++++....+++|...+.+++|+|++..+++++.|+.+++||+++.
T Consensus 136 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 215 (337)
T 1gxr_A 136 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG 215 (337)
T ss_dssp EEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred ecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCC
Confidence 46679999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417 95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 174 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v 174 (176)
+.+....+. ..+.++.|+|++..+++++.++.+++||+...+. ..+..|...+.+++|+|++.+|++++.|+.|++
T Consensus 216 ~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 291 (337)
T 1gxr_A 216 RQLQQHDFT---SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNA 291 (337)
T ss_dssp EEEEEEECS---SCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ceEeeecCC---CceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEE
Confidence 766655443 3578899999999999999999999999877665 456788999999999999999999999999999
Q ss_pred eC
Q psy15417 175 WN 176 (176)
Q Consensus 175 wd 176 (176)
||
T Consensus 292 ~~ 293 (337)
T 1gxr_A 292 WR 293 (337)
T ss_dssp EE
T ss_pred EE
Confidence 96
No 58
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=4.7e-28 Score=206.78 Aligned_cols=162 Identities=22% Similarity=0.345 Sum_probs=148.9
Q ss_pred CcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417 13 SPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR 92 (176)
Q Consensus 13 ~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 92 (176)
...+.+|.+.|++++|+|+++++++|+.||+|++||+.+++.+..+.+|...|.+++|+|+++++++++.|++|++||+.
T Consensus 608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA 687 (1249)
T ss_dssp SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC
Confidence 34567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeeEEeecceEeceEEEEECC--CCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417 93 ADQELAMYSHDNIICGITSVAFSR--SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDS 170 (176)
Q Consensus 93 ~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~ 170 (176)
+++.+..+.. +...+.++.|+| ++.++++|+.|+.+++||+.+++....+.+|...|.+++|+|++.++++|+.|+
T Consensus 688 ~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg 765 (1249)
T 3sfz_A 688 TGKLVHTYDE--HSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADG 765 (1249)
T ss_dssp TCCEEEEEEC--CSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSS
T ss_pred CCceEEEEcC--CCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCC
Confidence 8877665432 335688999999 456899999999999999999999999999999999999999999999999999
Q ss_pred cEEEeC
Q psy15417 171 FLRIWN 176 (176)
Q Consensus 171 ~v~vwd 176 (176)
+|++||
T Consensus 766 ~v~vwd 771 (1249)
T 3sfz_A 766 TLRLWD 771 (1249)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 999996
No 59
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.96 E-value=1.6e-27 Score=177.20 Aligned_cols=158 Identities=23% Similarity=0.378 Sum_probs=136.8
Q ss_pred ccCCCccCeEEEEEcCCC--CEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417 15 AASGHTGDVMSLSLAPDM--RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR 92 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~--~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 92 (176)
...+|...|.+++|++++ .++++++.|++|++||++++++...+.+|..+|++++|+|++++|++++.|+.|++||++
T Consensus 166 ~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~ 245 (340)
T 4aow_A 166 QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN 245 (340)
T ss_dssp CSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred EeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEec
Confidence 356899999999998865 578999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeee---------cCCCccEEEEEEeCCCCEE
Q psy15417 93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL---------AGHDNRVSCLGVTEDGMAV 163 (176)
Q Consensus 93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~---------~~~~~~i~~~~~~~~~~~l 163 (176)
+.+.+..+... ..+.++.|+|++.++ +++.|+.|++||++.......+ .+|...|.+++|+|++.+|
T Consensus 246 ~~~~~~~~~~~---~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l 321 (340)
T 4aow_A 246 EGKHLYTLDGG---DIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTL 321 (340)
T ss_dssp TTEEEEEEECS---SCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEE
T ss_pred cCceeeeecCC---ceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEE
Confidence 87776655443 357889999987655 5557899999998876654443 3678899999999999999
Q ss_pred EEccCCCcEEEeC
Q psy15417 164 ATGSWDSFLRIWN 176 (176)
Q Consensus 164 ~tg~~d~~v~vwd 176 (176)
++|+.|+.|+|||
T Consensus 322 ~sgs~Dg~v~iW~ 334 (340)
T 4aow_A 322 FAGYTDNLVRVWQ 334 (340)
T ss_dssp EEEETTSCEEEEE
T ss_pred EEEeCCCEEEEEe
Confidence 9999999999996
No 60
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.96 E-value=3.9e-28 Score=179.95 Aligned_cols=159 Identities=21% Similarity=0.407 Sum_probs=139.0
Q ss_pred CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCee---eeEec--CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC---KQTFP--GHESDINAVTFFPNGWAFATGSDDATCRLFDI 91 (176)
Q Consensus 17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~---~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~ 91 (176)
.+|.+.|.+++|+|+++++++++ ||.|++||+.+++. ...+. +|..+|.+++|+|+++.+++++.|+.|++||+
T Consensus 48 ~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 126 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDL 126 (337)
T ss_dssp ECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEEC
T ss_pred ccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEEC
Confidence 47999999999999999999999 99999999987653 23333 78899999999999999999999999999999
Q ss_pred CCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCc
Q psy15417 92 RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSF 171 (176)
Q Consensus 92 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~ 171 (176)
++++.........+...+.++.|+|++.++++++.++.+++||+..++....+..|...+.+++|+|++.+|++++.|+.
T Consensus 127 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 206 (337)
T 1gxr_A 127 AAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNT 206 (337)
T ss_dssp CCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred CCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCc
Confidence 87764333333333456889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeC
Q psy15417 172 LRIWN 176 (176)
Q Consensus 172 v~vwd 176 (176)
|++||
T Consensus 207 i~~~d 211 (337)
T 1gxr_A 207 VRSWD 211 (337)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99996
No 61
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.96 E-value=4.2e-28 Score=184.10 Aligned_cols=159 Identities=17% Similarity=0.208 Sum_probs=143.5
Q ss_pred CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecC---C---CCCeeEEEEccCCcEEEEeeCC---CcEE
Q psy15417 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG---H---ESDINAVTFFPNGWAFATGSDD---ATCR 87 (176)
Q Consensus 17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~---h---~~~v~~v~~~~~~~~l~s~s~d---~~i~ 87 (176)
..|...|.+++|+|++ ++++++.|+.|++||+++++.+..+.. | ..+|.+++|+|++.+|++++.| +.|+
T Consensus 183 ~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~ 261 (397)
T 1sq9_A 183 MTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCIT 261 (397)
T ss_dssp SSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEE
T ss_pred cCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEE
Confidence 4588999999999999 999999999999999999999999998 9 9999999999999999999999 9999
Q ss_pred EeeCCCCCeeeEEeecc-----------eEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec------CC---
Q psy15417 88 LFDIRADQELAMYSHDN-----------IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA------GH--- 147 (176)
Q Consensus 88 iwd~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~------~~--- 147 (176)
+||+++.+.+..+.... +...+.++.|+|++.++++++.|+.+++||+..++.+..+. +|
T Consensus 262 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 341 (397)
T 1sq9_A 262 LYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEED 341 (397)
T ss_dssp EEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGG
T ss_pred EEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhh
Confidence 99999887665554310 33568899999999999999999999999999999888888 77
Q ss_pred ------------CccEEEEEEeCCC----------CEEEEccCCCcEEEeC
Q psy15417 148 ------------DNRVSCLGVTEDG----------MAVATGSWDSFLRIWN 176 (176)
Q Consensus 148 ------------~~~i~~~~~~~~~----------~~l~tg~~d~~v~vwd 176 (176)
...|.+++|+|++ .+|++|+.|+.|++||
T Consensus 342 ~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 342 ILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR 392 (397)
T ss_dssp CCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred hhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence 8999999999998 7999999999999996
No 62
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=5.2e-28 Score=181.83 Aligned_cols=162 Identities=22% Similarity=0.288 Sum_probs=140.6
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeE--ecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT--FPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR 92 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~--~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 92 (176)
.+.+|...|.+++|+|++.+|++++.||.|++||+++++.... +..|...|.+++|+|++..+++++.|+.+++||++
T Consensus 47 ~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~ 126 (372)
T 1k8k_C 47 ELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFE 126 (372)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEE
T ss_pred eecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEec
Confidence 4668999999999999999999999999999999998875444 46789999999999999999999999999999998
Q ss_pred CCCeeeEE--eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeC------------------CCceeeeeecCCCccEE
Q psy15417 93 ADQELAMY--SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS------------------MKTERAGILAGHDNRVS 152 (176)
Q Consensus 93 ~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~------------------~~~~~~~~~~~~~~~i~ 152 (176)
........ ....+...+.++.|+|++.++++++.|+.+++||+ ..++....+..|...+.
T Consensus 127 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 206 (372)
T 1k8k_C 127 QENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVH 206 (372)
T ss_dssp TTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEE
T ss_pred CCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEE
Confidence 76642211 11223457899999999999999999999999995 35677778888999999
Q ss_pred EEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 153 CLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 153 ~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
+++|+|++.+|++++.|+.|++||
T Consensus 207 ~~~~~~~~~~l~~~~~d~~i~i~d 230 (372)
T 1k8k_C 207 GVCFSANGSRVAWVSHDSTVCLAD 230 (372)
T ss_dssp EEEECSSSSEEEEEETTTEEEEEE
T ss_pred EEEECCCCCEEEEEeCCCEEEEEE
Confidence 999999999999999999999996
No 63
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=9.2e-28 Score=179.72 Aligned_cols=122 Identities=19% Similarity=0.391 Sum_probs=106.9
Q ss_pred ccCCCccCeEEEEEcCC---CCEEEEEeCCCeEEEEEcCC-Ceee-eEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEe
Q psy15417 15 AASGHTGDVMSLSLAPD---MRTFVSGACDASAKLWDIRD-GSCK-QTFPGHESDINAVTFFPNGWAFATGSDDATCRLF 89 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~---~~~l~s~s~dg~v~~wd~~~-~~~~-~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw 89 (176)
.+.+|.+.|++++|+|+ +.+|++|+.||.|++||+++ ++.. ..+.+|..+|++++|+|++.+|++++.|+.|++|
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw 113 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMW 113 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEE
Confidence 46789999999999999 59999999999999999987 5444 7888999999999999999999999999999999
Q ss_pred eCCCCCeeeEEeecceEeceEEEEE--CCCCcEEEEEcCCCeEEEEeCCCce
Q psy15417 90 DIRADQELAMYSHDNIICGITSVAF--SRSGRLLLAGYDDFNCNVWDSMKTE 139 (176)
Q Consensus 90 d~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~g~~d~~i~v~d~~~~~ 139 (176)
|+++++......+. ..+.++.| +|++.++++++.|+.+++||+..++
T Consensus 114 d~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 114 DLSSNQAIQIAQHD---APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp ETTTTEEEEEEECS---SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred EcCCCCceeecccc---CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 99987766544443 46888999 8999999999999999999976543
No 64
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.96 E-value=5.8e-28 Score=198.23 Aligned_cols=160 Identities=19% Similarity=0.360 Sum_probs=146.5
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
.+.+|.+.|.+++|+|++.+|++++.||.|++||+.+++....+.+|..+|.+++|+|++..|++++.|+.|++||+.++
T Consensus 8 ~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~ 87 (814)
T 3mkq_A 8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87 (814)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred eeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc-eeeeeecCCCccEEEEEEeC-CCCEEEEccCCCcE
Q psy15417 95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT-ERAGILAGHDNRVSCLGVTE-DGMAVATGSWDSFL 172 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~tg~~d~~v 172 (176)
+.+..+. .+...+.++.|+|+++.+++++.|+.+++||+..+ .....+.+|...+.+++|+| ++..|++++.|+.|
T Consensus 88 ~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v 165 (814)
T 3mkq_A 88 EKVVDFE--AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (814)
T ss_dssp CEEEEEE--CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred cEEEEEe--cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeE
Confidence 7665543 22346889999999999999999999999998876 66777888999999999999 78899999999999
Q ss_pred EEeC
Q psy15417 173 RIWN 176 (176)
Q Consensus 173 ~vwd 176 (176)
++||
T Consensus 166 ~vwd 169 (814)
T 3mkq_A 166 KVWS 169 (814)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9996
No 65
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.96 E-value=1.4e-27 Score=194.03 Aligned_cols=160 Identities=25% Similarity=0.443 Sum_probs=136.6
Q ss_pred ccCCCccCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCC-----eeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEE
Q psy15417 15 AASGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDG-----SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRL 88 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~-----~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~i 88 (176)
.+.+|.+.|++++|+|++ .+|+||+.|++|++||+.+. .....+.+|...|.+++|+|++++|++++.|++|++
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~v 456 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 456 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEE
Confidence 367999999999999864 79999999999999999753 456788999999999999999999999999999999
Q ss_pred eeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeee---ecCCCccEEEEEEeCCC--CEE
Q psy15417 89 FDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI---LAGHDNRVSCLGVTEDG--MAV 163 (176)
Q Consensus 89 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~---~~~~~~~i~~~~~~~~~--~~l 163 (176)
||+.++.....+. .+...|.+++|+|++..+++|+.|++|++||......... ..+|...|.+++|+|++ ..|
T Consensus 457 wd~~~~~~~~~~~--~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 457 WDLAAGVSTRRFV--GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp EETTTTEEEEEEE--CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred EECCCCcceeEEe--CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 9998876654432 3335689999999999999999999999999755433322 24688899999999986 589
Q ss_pred EEccCCCcEEEeC
Q psy15417 164 ATGSWDSFLRIWN 176 (176)
Q Consensus 164 ~tg~~d~~v~vwd 176 (176)
++|+.|++|++||
T Consensus 535 ~s~s~d~~v~vwd 547 (694)
T 3dm0_A 535 VSASWDKTVKVWN 547 (694)
T ss_dssp EEEETTSCEEEEE
T ss_pred EEEeCCCeEEEEE
Confidence 9999999999996
No 66
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.1e-27 Score=184.40 Aligned_cols=159 Identities=19% Similarity=0.363 Sum_probs=132.7
Q ss_pred CCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCC---Ce---eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEe
Q psy15417 17 SGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRD---GS---CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF 89 (176)
Q Consensus 17 ~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~---~~---~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw 89 (176)
.+|.+.|++++|+| ++.+|++|+.||+|++||+.+ +. +...+ +|..+|.+++|+|++..|++++.|+.|++|
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw 138 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVL 138 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEE
Confidence 78999999999999 999999999999999999976 43 23333 489999999999999999999999999999
Q ss_pred eCC---CCCeeeEEeec--------c--eEeceEEEE--ECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC--CCccEE
Q psy15417 90 DIR---ADQELAMYSHD--------N--IICGITSVA--FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG--HDNRVS 152 (176)
Q Consensus 90 d~~---~~~~~~~~~~~--------~--~~~~v~~~~--~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~--~~~~i~ 152 (176)
|+. +++........ . ....+.++. +++++.++++|+.|+.|++||+..++.+..+.. |...|.
T Consensus 139 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~ 218 (437)
T 3gre_A 139 KVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVS 218 (437)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEE
T ss_pred EeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceE
Confidence 984 33333221110 0 112344444 667899999999999999999999988888887 889999
Q ss_pred EEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 153 CLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 153 ~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
+++|+|++.+|++|+.|+.|++||
T Consensus 219 ~~~~s~~~~~l~s~~~dg~i~iwd 242 (437)
T 3gre_A 219 SICIDEECCVLILGTTRGIIDIWD 242 (437)
T ss_dssp EEEECTTSCEEEEEETTSCEEEEE
T ss_pred EEEECCCCCEEEEEcCCCeEEEEE
Confidence 999999999999999999999996
No 67
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=1.6e-27 Score=180.63 Aligned_cols=168 Identities=14% Similarity=0.169 Sum_probs=137.1
Q ss_pred cccccccCCCcccCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecCC---CCCeeEEEEccCCcEEEE
Q psy15417 4 HLDKSALLGSPAASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGH---ESDINAVTFFPNGWAFAT 79 (176)
Q Consensus 4 ~~~~~~~~~~~~~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h---~~~v~~v~~~~~~~~l~s 79 (176)
++++..........+|.+.|.+++|+| ++.+|++++.|+.|++||+++ +....+..+ ...|.+++|+|++..|++
T Consensus 102 d~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 180 (383)
T 3ei3_B 102 DYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLAT 180 (383)
T ss_dssp ETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEE
T ss_pred eCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEE
Confidence 333333333333457999999999999 789999999999999999986 445555544 488999999999999999
Q ss_pred eeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCC----ceeeeeecCCCccEEEE
Q psy15417 80 GSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMK----TERAGILAGHDNRVSCL 154 (176)
Q Consensus 80 ~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~----~~~~~~~~~~~~~i~~~ 154 (176)
++.|+.|++||++ ++.+..+. .+...+.+++|+|++. ++++++.|+.+++||+.. ......+ +|...|.++
T Consensus 181 ~~~d~~i~i~d~~-~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~ 256 (383)
T 3ei3_B 181 GDSTGRLLLLGLD-GHEIFKEK--LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAA 256 (383)
T ss_dssp EETTSEEEEEETT-SCEEEEEE--CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEE
T ss_pred ECCCCCEEEEECC-CCEEEEec--cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEE
Confidence 9999999999995 44433332 2335688999999998 999999999999999876 4455555 689999999
Q ss_pred EEeC-CCCEEEEccCCCcEEEeC
Q psy15417 155 GVTE-DGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 155 ~~~~-~~~~l~tg~~d~~v~vwd 176 (176)
+|+| ++.+|++++.|+.|++||
T Consensus 257 ~~s~~~~~~l~~~~~d~~i~iwd 279 (383)
T 3ei3_B 257 YFNPTDSTKLLTTDQRNEIRVYS 279 (383)
T ss_dssp EECTTTSCEEEEEESSSEEEEEE
T ss_pred EEcCCCCCEEEEEcCCCcEEEEE
Confidence 9999 999999999999999996
No 68
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=7.8e-27 Score=174.74 Aligned_cols=158 Identities=20% Similarity=0.351 Sum_probs=145.0
Q ss_pred cCCCcc--CeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-CeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417 16 ASGHTG--DVMSLSLAPDMRTFVSGACDASAKLWDIRD-GSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR 92 (176)
Q Consensus 16 ~~gh~~--~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 92 (176)
+.+|.+ .+.+++|+|++.+|++++.||.|++||+++ .+....+..|..+|.+++|+|++..|++++.|+.|++||++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 248 (369)
T 3zwl_B 169 IITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVS 248 (369)
T ss_dssp EECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECC
Confidence 345666 999999999999999999999999999998 78889999999999999999999999999999999999999
Q ss_pred CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCC--------------eEEEEeCCCceeeeeecCCCccEEEEEEeC
Q psy15417 93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDF--------------NCNVWDSMKTERAGILAGHDNRVSCLGVTE 158 (176)
Q Consensus 93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~--------------~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~ 158 (176)
+.+....+... ..+..+.|+|++..+++++.++ .+++||...++....+.+|...|.+++|+|
T Consensus 249 ~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~ 325 (369)
T 3zwl_B 249 TLQVLKKYETD---CPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISP 325 (369)
T ss_dssp TCCEEEEEECS---SCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECT
T ss_pred CCceeeeecCC---CCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECC
Confidence 88777666533 3578899999999999999888 899999999999999999999999999999
Q ss_pred CCCEEEEccCCCcEEEeC
Q psy15417 159 DGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 159 ~~~~l~tg~~d~~v~vwd 176 (176)
++.+|++|+.|+.|++||
T Consensus 326 ~~~~l~s~~~dg~v~iw~ 343 (369)
T 3zwl_B 326 QGTSYASGGEDGFIRLHH 343 (369)
T ss_dssp TSSEEEEEETTSEEEEEE
T ss_pred CCCEEEEEcCCCeEEEEE
Confidence 999999999999999996
No 69
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=1.2e-27 Score=184.14 Aligned_cols=158 Identities=15% Similarity=0.247 Sum_probs=131.7
Q ss_pred CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe-----------eeeEecCCC------------CCeeEEEEccCC
Q psy15417 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS-----------CKQTFPGHE------------SDINAVTFFPNG 74 (176)
Q Consensus 18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~-----------~~~~~~~h~------------~~v~~v~~~~~~ 74 (176)
.|.+.|.+++|+|++.+|++|+.||.|++||+.+++ ....+.+|. .+|++++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 478999999999999999999999999999998876 577899998 889999999998
Q ss_pred --cEEEEeeCCCcEEEeeCCCCCeeeE--------------------------------------EeecceEeceEEEEE
Q psy15417 75 --WAFATGSDDATCRLFDIRADQELAM--------------------------------------YSHDNIICGITSVAF 114 (176)
Q Consensus 75 --~~l~s~s~d~~i~iwd~~~~~~~~~--------------------------------------~~~~~~~~~v~~~~~ 114 (176)
..|++++.|++|++||+.+.+.... .-...+...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 7999999999999999865322100 001223356889999
Q ss_pred CCCCcEEEEEcCCCeEEEEeCCCc-eeee-------eecCCCccEEEEEEeCCC-CEEEEccCCCcEEEeC
Q psy15417 115 SRSGRLLLAGYDDFNCNVWDSMKT-ERAG-------ILAGHDNRVSCLGVTEDG-MAVATGSWDSFLRIWN 176 (176)
Q Consensus 115 ~~~~~~l~~g~~d~~i~v~d~~~~-~~~~-------~~~~~~~~i~~~~~~~~~-~~l~tg~~d~~v~vwd 176 (176)
+|++.++++| .|++|++||+... +... .+.+|...|.+++|+|++ .+|++|+.|+.|++||
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 255 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCD 255 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEE
Confidence 9999999999 8999999998743 3333 356889999999999998 9999999999999996
No 70
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.96 E-value=2.6e-27 Score=183.56 Aligned_cols=159 Identities=28% Similarity=0.494 Sum_probs=137.9
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEc--cCCcEEEEeeCCCcEEEeeCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFF--PNGWAFATGSDDATCRLFDIR 92 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~--~~~~~l~s~s~d~~i~iwd~~ 92 (176)
.+.+|.+.|.+++|+|++ ++++|+.||+|++||++++++...+.+|..+|.+++|. +++..+++++.|++|++||++
T Consensus 157 ~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~ 235 (464)
T 3v7d_B 157 QLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLP 235 (464)
T ss_dssp EECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECC
T ss_pred EEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCC
Confidence 356899999999999887 99999999999999999999999999999999999998 467899999999999999998
Q ss_pred CCCeeeE---------------------EeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccE
Q psy15417 93 ADQELAM---------------------YSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRV 151 (176)
Q Consensus 93 ~~~~~~~---------------------~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i 151 (176)
+...... .....+...+.++ ++++.++++|+.|+.+++||+.+++.+..+.+|...|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v 313 (464)
T 3v7d_B 236 KESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRI 313 (464)
T ss_dssp CCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCE
Confidence 7653321 1112222334444 5778999999999999999999999999999999999
Q ss_pred EEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 152 SCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 152 ~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
.+++|+|++.++++|+.|+.|++||
T Consensus 314 ~~~~~~~~~~~l~sg~~dg~i~vwd 338 (464)
T 3v7d_B 314 YSTIYDHERKRCISASMDTTIRIWD 338 (464)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEE
T ss_pred EEEEEcCCCCEEEEEeCCCcEEEEE
Confidence 9999999999999999999999996
No 71
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=2.3e-27 Score=181.17 Aligned_cols=162 Identities=22% Similarity=0.322 Sum_probs=137.9
Q ss_pred ccCCCccCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCeeeeEe--cCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417 15 AASGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTF--PGHESDINAVTFFPNGWAFATGSDDATCRLFDI 91 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~~~~~~~--~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~ 91 (176)
.+.+|.+.|.+++|+|++ .+|++++.|++|++||+++++....+ .+|...|.+++|+|++..|++++.|+.|++||+
T Consensus 126 ~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 205 (402)
T 2aq5_A 126 TLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEP 205 (402)
T ss_dssp EEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEET
T ss_pred EecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeC
Confidence 477899999999999998 69999999999999999999999999 889999999999999999999999999999999
Q ss_pred CCCCeeeEEeecceEeceEEEEECCCCcEEEEE---cCCCeEEEEeCCCcee-eeee-cCCCccEEEEEEeCCCCEEE-E
Q psy15417 92 RADQELAMYSHDNIICGITSVAFSRSGRLLLAG---YDDFNCNVWDSMKTER-AGIL-AGHDNRVSCLGVTEDGMAVA-T 165 (176)
Q Consensus 92 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g---~~d~~i~v~d~~~~~~-~~~~-~~~~~~i~~~~~~~~~~~l~-t 165 (176)
++++.+..+...+....+..+.|+|++.++++| +.++.+++||+...+. .... ..|...+.+++|+|++.+|+ +
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 285 (402)
T 2aq5_A 206 RKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLC 285 (402)
T ss_dssp TTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEE
T ss_pred CCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEE
Confidence 987766554222221236789999999999999 7999999999877543 2222 35667899999999999986 5
Q ss_pred ccCCCcEEEeC
Q psy15417 166 GSWDSFLRIWN 176 (176)
Q Consensus 166 g~~d~~v~vwd 176 (176)
|+.|+.|++||
T Consensus 286 g~~dg~i~i~d 296 (402)
T 2aq5_A 286 GKGDSSIRYFE 296 (402)
T ss_dssp ETTCSCEEEEE
T ss_pred EcCCCeEEEEE
Confidence 66899999996
No 72
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.3e-27 Score=180.72 Aligned_cols=159 Identities=18% Similarity=0.246 Sum_probs=144.4
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
.+.+|...|.+++|+|++.+|++++.|+.|++||+++++....+.+|...|.+++|+|++ .+++++.|+.|++||+++.
T Consensus 242 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~ 320 (425)
T 1r5m_A 242 KLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQN 320 (425)
T ss_dssp EECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTT
T ss_pred eeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCC
Confidence 356899999999999999999999999999999999999999999999999999999999 9999999999999999887
Q ss_pred CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCce--------------------eeeeecCCCc--cEE
Q psy15417 95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTE--------------------RAGILAGHDN--RVS 152 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~--------------------~~~~~~~~~~--~i~ 152 (176)
+.+..+... ...+.++.|+|++.++++++.|+.+++||+...+ .+..+..|.. .|.
T Consensus 321 ~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 398 (425)
T 1r5m_A 321 TLLALSIVD--GVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIF 398 (425)
T ss_dssp EEEEEEECT--TCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEE
T ss_pred cEeEecccC--CccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceE
Confidence 766554432 2468899999999999999999999999988777 7888888876 999
Q ss_pred EEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 153 CLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 153 ~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
+++|+|++.+|++++.|+.|++||
T Consensus 399 ~~~~s~~~~~l~~~~~dg~i~iw~ 422 (425)
T 1r5m_A 399 DLSWNCAGNKISVAYSLQEGSVVA 422 (425)
T ss_dssp EEEECTTSSEEEEEESSSCCEEEE
T ss_pred EEEccCCCceEEEEecCceEEEEe
Confidence 999999999999999999999996
No 73
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=1.5e-27 Score=178.55 Aligned_cols=160 Identities=21% Similarity=0.318 Sum_probs=137.2
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEE--ccCCcEEEEeeCCCcEEEeeCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTF--FPNGWAFATGSDDATCRLFDIR 92 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~--~~~~~~l~s~s~d~~i~iwd~~ 92 (176)
.+.+|.+.|.+++|+|++.+|++++.||.|++||+++++... +.+|..+|.+++| +|++..|++++.|+.|++||++
T Consensus 81 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 159 (368)
T 3mmy_A 81 AQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTR 159 (368)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSS
T ss_pred EeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECC
Confidence 467899999999999999999999999999999999998766 5569999999999 8899999999999999999987
Q ss_pred CCCeeeEEee----------------------------------------------------------------------
Q psy15417 93 ADQELAMYSH---------------------------------------------------------------------- 102 (176)
Q Consensus 93 ~~~~~~~~~~---------------------------------------------------------------------- 102 (176)
+++.+..+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~ 239 (368)
T 3mmy_A 160 SSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGR 239 (368)
T ss_dssp CSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSE
T ss_pred CCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCc
Confidence 6543211110
Q ss_pred ------------------cceEe------------ceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEE
Q psy15417 103 ------------------DNIIC------------GITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVS 152 (176)
Q Consensus 103 ------------------~~~~~------------~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~ 152 (176)
..+.. .+.+++|+|++.++++|+.|+.|++||+.+++++..+..|...|.
T Consensus 240 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~ 319 (368)
T 3mmy_A 240 VAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPIS 319 (368)
T ss_dssp EEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEE
T ss_pred EEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCce
Confidence 00011 488999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCEEEEccCCCcEEEe
Q psy15417 153 CLGVTEDGMAVATGSWDSFLRIW 175 (176)
Q Consensus 153 ~~~~~~~~~~l~tg~~d~~v~vw 175 (176)
+++|+|++.+|++|+.|+..+.|
T Consensus 320 ~~~~s~~g~~l~~~s~d~~~~~~ 342 (368)
T 3mmy_A 320 ACCFNHNGNIFAYASSYDWSKGH 342 (368)
T ss_dssp EEEECTTSSCEEEEECCCSTTCG
T ss_pred EEEECCCCCeEEEEecccccccc
Confidence 99999999999999988765443
No 74
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.6e-27 Score=178.78 Aligned_cols=158 Identities=11% Similarity=0.155 Sum_probs=129.1
Q ss_pred CCCccCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCeeeeEecC-CCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417 17 SGHTGDVMSLSLAP--DMRTFVSGACDASAKLWDIRDGSCKQTFPG-HESDINAVTFFPNGWAFATGSDDATCRLFDIRA 93 (176)
Q Consensus 17 ~gh~~~V~~~~~~~--~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 93 (176)
.+|.+.|.+++|+| ++.++++|+.||+|++||++++++...+.. |...+++++|+|++.++++|+.|+.|++||+++
T Consensus 122 ~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~ 201 (343)
T 3lrv_A 122 VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSS 201 (343)
T ss_dssp CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSC
T ss_pred cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 35778999999999 999999999999999999999988766644 456899999999999999999999999999998
Q ss_pred CCee-eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC---CCccE--EEEEEeCCCCEEEEcc
Q psy15417 94 DQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG---HDNRV--SCLGVTEDGMAVATGS 167 (176)
Q Consensus 94 ~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~---~~~~i--~~~~~~~~~~~l~tg~ 167 (176)
++.. ..+.. .+..+|.++.|+|++.++++++.+ .+++||+.+.+....+.. |...+ .+++|+|++.+|++++
T Consensus 202 ~~~~~~~~~~-~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 202 PDQASSRFPV-DEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYS 279 (343)
T ss_dssp TTSCCEECCC-CTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEE
T ss_pred CCCCccEEec-cCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEec
Confidence 8765 44433 123578999999999999999955 999999988766544433 33333 3699999999999988
Q ss_pred C-CCcEEEeC
Q psy15417 168 W-DSFLRIWN 176 (176)
Q Consensus 168 ~-d~~v~vwd 176 (176)
. |+.+++|+
T Consensus 280 ~~d~~i~v~~ 289 (343)
T 3lrv_A 280 NESNSLTIYK 289 (343)
T ss_dssp TTTTEEEEEE
T ss_pred CCCCcEEEEE
Confidence 8 99999994
No 75
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.7e-27 Score=180.53 Aligned_cols=160 Identities=18% Similarity=0.293 Sum_probs=142.2
Q ss_pred cCCCccCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCeeeeEecCC------CCCeeEEEEccCC-cEEEEeeCCC---
Q psy15417 16 ASGHTGDVMSLSLAPD-MRTFVSGACDASAKLWDIRDGSCKQTFPGH------ESDINAVTFFPNG-WAFATGSDDA--- 84 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h------~~~v~~v~~~~~~-~~l~s~s~d~--- 84 (176)
..+|...|.+++|+|+ +.+|++++.|+.|++||+++++....+..| ..+|.+++|+|++ ..+++++.|+
T Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~ 240 (416)
T 2pm9_A 161 SMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDP 240 (416)
T ss_dssp SCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSC
T ss_pred ccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCc
Confidence 4679999999999998 789999999999999999999998888876 7899999999996 6899999999
Q ss_pred cEEEeeCCCCC-eeeEEeecceEeceEEEEECC-CCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCC-C
Q psy15417 85 TCRLFDIRADQ-ELAMYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG-M 161 (176)
Q Consensus 85 ~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~ 161 (176)
.|++||+++.. ....+.. .+...+.++.|+| ++.++++++.|+++++||+.+++++..+..|...|.+++|+|++ .
T Consensus 241 ~i~~~d~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 319 (416)
T 2pm9_A 241 SILIWDLRNANTPLQTLNQ-GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPD 319 (416)
T ss_dssp CCCEEETTSTTSCSBCCCS-CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTT
T ss_pred eEEEEeCCCCCCCcEEeec-CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCC
Confidence 99999998753 3333220 2335688999999 89999999999999999999999999999999999999999998 8
Q ss_pred EEEEccCCCcEEEeC
Q psy15417 162 AVATGSWDSFLRIWN 176 (176)
Q Consensus 162 ~l~tg~~d~~v~vwd 176 (176)
+|++++.|+.|++||
T Consensus 320 ~l~s~~~d~~i~iw~ 334 (416)
T 2pm9_A 320 LFACASFDNKIEVQT 334 (416)
T ss_dssp EEEECCSSSEEEEEE
T ss_pred EEEEEecCCcEEEEE
Confidence 999999999999996
No 76
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=5.6e-27 Score=179.20 Aligned_cols=159 Identities=24% Similarity=0.419 Sum_probs=139.9
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCC-cEEEEee--CCCcEEEeeC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WAFATGS--DDATCRLFDI 91 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s--~d~~i~iwd~ 91 (176)
.+.+|.+.|.+++|+|++.+|++|+.|+.|++||+++++....+..|...|.+++|+|++ ..+++++ .|+.|++||+
T Consensus 212 ~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~ 291 (401)
T 4aez_A 212 TLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNA 291 (401)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEET
T ss_pred EEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEEC
Confidence 366899999999999999999999999999999999999999999999999999999975 5666655 7999999999
Q ss_pred CCCCeeeEEeecceEeceEEEEECCCCcEEEE--EcCCCeEEEEeCCCcee--eeeecCCCccEEEEEEeCCCCEEEEcc
Q psy15417 92 RADQELAMYSHDNIICGITSVAFSRSGRLLLA--GYDDFNCNVWDSMKTER--AGILAGHDNRVSCLGVTEDGMAVATGS 167 (176)
Q Consensus 92 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--g~~d~~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~tg~ 167 (176)
++++.+..+... ..+.++.|+|++..+++ |..|+.+++||+..++. ...+.+|...|.+++|+|++.+|++++
T Consensus 292 ~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~ 368 (401)
T 4aez_A 292 ATGARVNTVDAG---SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAA 368 (401)
T ss_dssp TTCCEEEEEECS---SCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEEC
T ss_pred CCCCEEEEEeCC---CcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEe
Confidence 988776665543 35889999999999988 66899999999887544 344678999999999999999999999
Q ss_pred CCCcEEEeC
Q psy15417 168 WDSFLRIWN 176 (176)
Q Consensus 168 ~d~~v~vwd 176 (176)
.|+.|++||
T Consensus 369 ~dg~i~iw~ 377 (401)
T 4aez_A 369 SDENLKFWR 377 (401)
T ss_dssp TTSEEEEEE
T ss_pred CCCcEEEEE
Confidence 999999996
No 77
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.96 E-value=6.1e-27 Score=175.33 Aligned_cols=159 Identities=13% Similarity=0.201 Sum_probs=137.6
Q ss_pred cCCCccCeEEEEEcCC----CCEEEEEeCCCeEEEEEcCCCeeeeEecC-----CCCCeeEEEEccC----CcEEEEeeC
Q psy15417 16 ASGHTGDVMSLSLAPD----MRTFVSGACDASAKLWDIRDGSCKQTFPG-----HESDINAVTFFPN----GWAFATGSD 82 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~----~~~l~s~s~dg~v~~wd~~~~~~~~~~~~-----h~~~v~~v~~~~~----~~~l~s~s~ 82 (176)
..+|.+.|.+++|+|+ ...+++++.++.|++||+.+++.+..+.. |...|.+++|+|+ +.+|++++.
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 4589999999999984 45677777788999999998876666553 5578999999999 679999999
Q ss_pred CCcEEEeeCCCCCeeeEEeecceEeceEEEEECC-CCcEEEEEcCCCeEEEEeCCCceeeeee---cCCCccEEEEEEeC
Q psy15417 83 DATCRLFDIRADQELAMYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNVWDSMKTERAGIL---AGHDNRVSCLGVTE 158 (176)
Q Consensus 83 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~g~~d~~i~v~d~~~~~~~~~~---~~~~~~i~~~~~~~ 158 (176)
|+.|++||+.+++.+..+. .+...|.++.|+| ++.++++++.|+.|++||+..++....+ ..|...|.+++|+|
T Consensus 94 dg~i~v~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 171 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYV--GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL 171 (366)
T ss_dssp TCEEEEECTTTCCEEEEEE--SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT
T ss_pred CCEEEEEEchhceEeeeec--CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC
Confidence 9999999998877665543 2335789999999 8999999999999999999988888877 68999999999999
Q ss_pred CCCEEEEccCCCcEEEeC
Q psy15417 159 DGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 159 ~~~~l~tg~~d~~v~vwd 176 (176)
++.+|++|+.|+.|++||
T Consensus 172 ~~~~l~~~~~dg~i~i~d 189 (366)
T 3k26_A 172 LGEKIMSCGMDHSLKLWR 189 (366)
T ss_dssp TSSEEEEEETTSCEEEEE
T ss_pred CCCEEEEecCCCCEEEEE
Confidence 999999999999999996
No 78
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.96 E-value=1.3e-27 Score=178.98 Aligned_cols=157 Identities=17% Similarity=0.293 Sum_probs=137.5
Q ss_pred CCccCeEEEEEcCC----CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCC
Q psy15417 18 GHTGDVMSLSLAPD----MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIR 92 (176)
Q Consensus 18 gh~~~V~~~~~~~~----~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~ 92 (176)
.|.+.|.+++|+|+ +.+|++|+.||.|++||+++++.+..+.+|..+|.+++|+| ++..|++++.|+.|++||++
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 146 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ 146 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee
Confidence 47788999999998 67999999999999999999999999999999999999999 89999999999999999999
Q ss_pred CCCeeeEEe-ecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec--------------------------
Q psy15417 93 ADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA-------------------------- 145 (176)
Q Consensus 93 ~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~-------------------------- 145 (176)
+++....+. ...+...+.++.|+|++..+++++.|+.+++||+..++....+.
T Consensus 147 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (366)
T 3k26_A 147 TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFST 226 (366)
T ss_dssp TTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEE
T ss_pred cCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccc
Confidence 877665542 12334578999999999999999999999999988765544333
Q ss_pred --CCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 146 --GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 146 --~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
.|...|.+++|+ +.+|++++.|+.|++||
T Consensus 227 ~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd 257 (366)
T 3k26_A 227 RDIHRNYVDCVRWL--GDLILSKSCENAIVCWK 257 (366)
T ss_dssp CSSCSSCCCEEEEE--TTEEEEECSSSEEEEEE
T ss_pred ccCCcceEEEEEEc--CCEEEEEecCCEEEEEe
Confidence 388999999998 67999999999999996
No 79
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.3e-27 Score=196.03 Aligned_cols=162 Identities=19% Similarity=0.262 Sum_probs=138.6
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcC--CCeeeeEecCCCCCeeEEEEccC--CcEEEEeeCCCcEEEee
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIR--DGSCKQTFPGHESDINAVTFFPN--GWAFATGSDDATCRLFD 90 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~--~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~d~~i~iwd 90 (176)
.+.||.+.|++++|+|++.++++|+.||+|++||+. +++....+.+|..+|.+++|+|+ +..+++++.||.|++||
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 83 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence 468999999999999999999999999999999998 55678899999999999999988 99999999999999999
Q ss_pred CCCCCeeeEEeecceEeceEEEEECCC--CcEEEEEcCCCeEEEEeCCCc--eeeeeecCCCccEEEEEEeC--------
Q psy15417 91 IRADQELAMYSHDNIICGITSVAFSRS--GRLLLAGYDDFNCNVWDSMKT--ERAGILAGHDNRVSCLGVTE-------- 158 (176)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~g~~d~~i~v~d~~~~--~~~~~~~~~~~~i~~~~~~~-------- 158 (176)
++++..........+...|.++.|+|+ +..+++|+.|+.+++||+... .......+|...|.+++|+|
T Consensus 84 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~ 163 (753)
T 3jro_A 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (753)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC------
T ss_pred CCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccc
Confidence 987753333333334457899999999 999999999999999998776 33445678899999999999
Q ss_pred -----CCCEEEEccCCCcEEEeC
Q psy15417 159 -----DGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 159 -----~~~~l~tg~~d~~v~vwd 176 (176)
++.++++|+.|+.|++||
T Consensus 164 ~~~~~d~~~l~sgs~dg~I~iwd 186 (753)
T 3jro_A 164 HNGTKESRKFVTGGADNLVKIWK 186 (753)
T ss_dssp ---CGGGCCEEEEETTSCEEEEE
T ss_pred cccCCCCCEEEEEECCCeEEEEe
Confidence 588999999999999996
No 80
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.9e-28 Score=201.41 Aligned_cols=162 Identities=14% Similarity=0.205 Sum_probs=132.8
Q ss_pred cccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeee--eEe----c-----CCCCCeeEEEEccCCcEEEEeeC
Q psy15417 14 PAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK--QTF----P-----GHESDINAVTFFPNGWAFATGSD 82 (176)
Q Consensus 14 ~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~--~~~----~-----~h~~~v~~v~~~~~~~~l~s~s~ 82 (176)
..+.||...+..++|+|++++|++|+.|++|++||+.++... ..+ . +|...|.+++|+|++..|++|+.
T Consensus 429 ~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~ 508 (902)
T 2oaj_A 429 YLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIE 508 (902)
T ss_dssp CSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEET
T ss_pred CcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEec
Confidence 356788888888889999999999999999999999887421 111 1 78899999999999999999999
Q ss_pred CCcEEEeeCCCCCe-------------------------------------------eeEEeecceEeceEEEEECCCCc
Q psy15417 83 DATCRLFDIRADQE-------------------------------------------LAMYSHDNIICGITSVAFSRSGR 119 (176)
Q Consensus 83 d~~i~iwd~~~~~~-------------------------------------------~~~~~~~~~~~~v~~~~~~~~~~ 119 (176)
|++|++|++.+++. ........+...|.+++|+|+|
T Consensus 509 DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG- 587 (902)
T 2oaj_A 509 TGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG- 587 (902)
T ss_dssp TSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-
T ss_pred CcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-
Confidence 99999999865421 0011222344579999999999
Q ss_pred EEEEEcCCCeEEEEeCCCceeee-----eec-CCCccEEEEEEe-----CCC---CEEEEccCCCcEEEeC
Q psy15417 120 LLLAGYDDFNCNVWDSMKTERAG-----ILA-GHDNRVSCLGVT-----EDG---MAVATGSWDSFLRIWN 176 (176)
Q Consensus 120 ~l~~g~~d~~i~v~d~~~~~~~~-----~~~-~~~~~i~~~~~~-----~~~---~~l~tg~~d~~v~vwd 176 (176)
+|++|+.|++|++||+.....+. .+. +|...|++++|+ ||| ..|++|+.|++|++||
T Consensus 588 ~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd 658 (902)
T 2oaj_A 588 FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYK 658 (902)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEE
T ss_pred EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEE
Confidence 99999999999999987765542 333 889999999999 885 8999999999999996
No 81
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=4.9e-27 Score=178.14 Aligned_cols=159 Identities=22% Similarity=0.363 Sum_probs=139.8
Q ss_pred ccCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEec-------------CCCCCeeEEEEcc-CCcEEEE
Q psy15417 15 AASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFP-------------GHESDINAVTFFP-NGWAFAT 79 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-------------~h~~~v~~v~~~~-~~~~l~s 79 (176)
.+.+|.+.|.+++|+| ++.+|++|+.||.|++||+.+++....+. +|..+|.+++|+| ++..|++
T Consensus 38 ~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 117 (408)
T 4a11_B 38 VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTS 117 (408)
T ss_dssp ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEE
T ss_pred eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEE
Confidence 4678999999999999 99999999999999999999876555443 5999999999999 7789999
Q ss_pred eeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCC---CcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEE
Q psy15417 80 GSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRS---GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGV 156 (176)
Q Consensus 80 ~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 156 (176)
++.|+.|++||+++.+....+.... .+.++.++|. +.++++++.++.+++||+..++....+..|...|.+++|
T Consensus 118 ~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~ 194 (408)
T 4a11_B 118 SSFDKTLKVWDTNTLQTADVFNFEE---TVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSW 194 (408)
T ss_dssp EETTSEEEEEETTTTEEEEEEECSS---CEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEE
T ss_pred EeCCCeEEEeeCCCCccceeccCCC---ceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEE
Confidence 9999999999999887766655443 4667788874 459999999999999999988888889999999999999
Q ss_pred eCCCC-EEEEccCCCcEEEeC
Q psy15417 157 TEDGM-AVATGSWDSFLRIWN 176 (176)
Q Consensus 157 ~~~~~-~l~tg~~d~~v~vwd 176 (176)
+|++. .+++|+.|+.|++||
T Consensus 195 ~~~~~~ll~~~~~dg~i~i~d 215 (408)
T 4a11_B 195 SPRYDYILATASADSRVKLWD 215 (408)
T ss_dssp CSSCTTEEEEEETTSCEEEEE
T ss_pred CCCCCcEEEEEcCCCcEEEEE
Confidence 99988 589999999999996
No 82
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.5e-27 Score=195.71 Aligned_cols=162 Identities=20% Similarity=0.314 Sum_probs=142.2
Q ss_pred ccCCCccCeEEEEEcCC--CCEEEEEeCCCeEEEEEcCCCe--eeeEecCCCCCeeEEEEccC--CcEEEEeeCCCcEEE
Q psy15417 15 AASGHTGDVMSLSLAPD--MRTFVSGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFPN--GWAFATGSDDATCRL 88 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~--~~~l~s~s~dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~d~~i~i 88 (176)
.+.+|.+.|.+++|+|+ +.+|++|+.||+|++||+++++ ....+.+|..+|.+++|+|+ +..+++++.|+.|++
T Consensus 48 ~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~v 127 (753)
T 3jro_A 48 TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSV 127 (753)
T ss_dssp EECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred eccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEE
Confidence 46789999999999988 8999999999999999999987 77888899999999999999 999999999999999
Q ss_pred eeCCCCCeeeEEeecceEeceEEEEECC-------------CCcEEEEEcCCCeEEEEeCCCc----eeeeeecCCCccE
Q psy15417 89 FDIRADQELAMYSHDNIICGITSVAFSR-------------SGRLLLAGYDDFNCNVWDSMKT----ERAGILAGHDNRV 151 (176)
Q Consensus 89 wd~~~~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~l~~g~~d~~i~v~d~~~~----~~~~~~~~~~~~i 151 (176)
||++............+...+.++.|+| ++..+++|+.|++|++||+... .....+.+|...|
T Consensus 128 wdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V 207 (753)
T 3jro_A 128 VEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV 207 (753)
T ss_dssp EECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE
T ss_pred EEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcE
Confidence 9998764433223333345788999999 5889999999999999997665 5566778899999
Q ss_pred EEEEEeCC---CCEEEEccCCCcEEEeC
Q psy15417 152 SCLGVTED---GMAVATGSWDSFLRIWN 176 (176)
Q Consensus 152 ~~~~~~~~---~~~l~tg~~d~~v~vwd 176 (176)
.+++|+|+ +.+|++|+.|+.|++||
T Consensus 208 ~~l~~sp~~~~~~~l~s~s~Dg~I~iwd 235 (753)
T 3jro_A 208 RDVAWSPTVLLRSYLASVSQDRTCIIWT 235 (753)
T ss_dssp EEEEECCCCSSSEEEEEEESSSCEEEEE
T ss_pred EEEEeccCCCCCCEEEEEecCCEEEEec
Confidence 99999999 89999999999999996
No 83
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.95 E-value=6.2e-28 Score=185.82 Aligned_cols=157 Identities=13% Similarity=0.254 Sum_probs=134.0
Q ss_pred CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec-CCCCCeeEEEEcc----CCcEEEEeeCCCcEEEeeCCC
Q psy15417 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP-GHESDINAVTFFP----NGWAFATGSDDATCRLFDIRA 93 (176)
Q Consensus 19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~~----~~~~l~s~s~d~~i~iwd~~~ 93 (176)
|.+.|.+++|+|++.+|++|+.||+|++||+++++++..+. .|..+|.+++++| ++..+++++.|+.|++||+++
T Consensus 213 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 213 RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVK 292 (437)
T ss_dssp GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTT
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCC
Confidence 89999999999999999999999999999999999998886 7888999996664 578999999999999999988
Q ss_pred CCeeeEEeec------------------------ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC---
Q psy15417 94 DQELAMYSHD------------------------NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG--- 146 (176)
Q Consensus 94 ~~~~~~~~~~------------------------~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~--- 146 (176)
++.+..+... .+...|.+++|+ ++.++++|+.|+.|++||+.+++....+.+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~ 371 (437)
T 3gre_A 293 GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSR 371 (437)
T ss_dssp TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--
T ss_pred CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccc
Confidence 7765444311 022347888999 779999999999999999988776665554
Q ss_pred ----------------------------------CCccEEEEEEeCC--CCEEEEccCCCcEEEeC
Q psy15417 147 ----------------------------------HDNRVSCLGVTED--GMAVATGSWDSFLRIWN 176 (176)
Q Consensus 147 ----------------------------------~~~~i~~~~~~~~--~~~l~tg~~d~~v~vwd 176 (176)
|...|.+++|.++ +.+|++|+.||.|+||+
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 372 FSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 7889999999987 77999999999999996
No 84
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.7e-27 Score=183.49 Aligned_cols=160 Identities=14% Similarity=0.116 Sum_probs=137.3
Q ss_pred cCCCccCeEEEEEcCCCCEE-EEEeCCCeEEEEEcC--CCeeeeEec--CCCCCeeEEEEccCCcEEEEeeCCCcEEEee
Q psy15417 16 ASGHTGDVMSLSLAPDMRTF-VSGACDASAKLWDIR--DGSCKQTFP--GHESDINAVTFFPNGWAFATGSDDATCRLFD 90 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~--~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd 90 (176)
.++|.+.|.+++|+|++++| ++|+.||.|++||+. ++++...+. .|...|++++|+|++.+|++++.++.+++|+
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~ 177 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSID 177 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 45788899999999999986 899999999999999 888888776 5678999999999999999999999999999
Q ss_pred CCCCCeee--EEeecceEeceEEEEECCC---CcEEEEEcCCCeEEEEeCCCceeeee-ecCCCccEEEEEEeCCCCEEE
Q psy15417 91 IRADQELA--MYSHDNIICGITSVAFSRS---GRLLLAGYDDFNCNVWDSMKTERAGI-LAGHDNRVSCLGVTEDGMAVA 164 (176)
Q Consensus 91 ~~~~~~~~--~~~~~~~~~~v~~~~~~~~---~~~l~~g~~d~~i~v~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~ 164 (176)
+.+..... ......+...+.++.|+|+ +.++++|+.|++|++||+..++.+.. +.+|...|.+++|+ ++.+|+
T Consensus 178 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~ 256 (450)
T 2vdu_B 178 INSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLL 256 (450)
T ss_dssp TTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEE
T ss_pred cCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEE
Confidence 97765432 1111222346889999999 99999999999999999988877766 56899999999999 999999
Q ss_pred EccCCCcEEEeC
Q psy15417 165 TGSWDSFLRIWN 176 (176)
Q Consensus 165 tg~~d~~v~vwd 176 (176)
+|+.|++|++||
T Consensus 257 s~~~d~~v~vwd 268 (450)
T 2vdu_B 257 SAGGDDKIFAWD 268 (450)
T ss_dssp EEESSSEEEEEE
T ss_pred EEeCCCeEEEEE
Confidence 999999999996
No 85
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.95 E-value=3e-27 Score=180.75 Aligned_cols=157 Identities=18% Similarity=0.272 Sum_probs=134.3
Q ss_pred CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe
Q psy15417 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE 96 (176)
Q Consensus 17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 96 (176)
.+| ..+....|++++.+|++|+.||.|++||+++++....+.+|...|++++|+|++.+|++++.|+.|++||+++++.
T Consensus 95 ~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 173 (420)
T 3vl1_A 95 KRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSN 173 (420)
T ss_dssp CSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCC
T ss_pred ecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcC
Confidence 344 4445557899999999999999999999999999888899999999999999999999999999999999988776
Q ss_pred eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC---CCccEEEEEE-----------------
Q psy15417 97 LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG---HDNRVSCLGV----------------- 156 (176)
Q Consensus 97 ~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~---~~~~i~~~~~----------------- 156 (176)
+..+. .+...|.+++|+|++..+++++.|+++++||+.+++....+.. |...+.++++
T Consensus 174 ~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~ 251 (420)
T 3vl1_A 174 PRTLI--GHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKN 251 (420)
T ss_dssp CEEEE--CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCC
T ss_pred ceEEc--CCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCccc
Confidence 65543 2335688999999999999999999999999998888877764 3445555554
Q ss_pred ----eCCCCEEEEccCCCcEEEeC
Q psy15417 157 ----TEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 157 ----~~~~~~l~tg~~d~~v~vwd 176 (176)
+|++.+|++|+.|+.|++||
T Consensus 252 ~~~~s~~~~~l~~~~~dg~i~i~d 275 (420)
T 3vl1_A 252 NLEFGTYGKYVIAGHVSGVITVHN 275 (420)
T ss_dssp TTCSSCTTEEEEEEETTSCEEEEE
T ss_pred ceEEcCCCCEEEEEcCCCeEEEEE
Confidence 68899999999999999996
No 86
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.2e-27 Score=179.47 Aligned_cols=161 Identities=14% Similarity=0.220 Sum_probs=139.4
Q ss_pred cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC----CeeeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEee
Q psy15417 16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD----GSCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFD 90 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~----~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd 90 (176)
..+|...|.+++|+|++.+|++|+.||.|++||+.+ .+....+.+|..+|++++|+|+ +.+|++++.|+.|++||
T Consensus 63 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 142 (416)
T 2pm9_A 63 SLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWD 142 (416)
T ss_dssp CCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCB
T ss_pred EEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEE
Confidence 346899999999999999999999999999999987 4578889999999999999998 89999999999999999
Q ss_pred CCCCC------eeeEE-eecceEeceEEEEECCC-CcEEEEEcCCCeEEEEeCCCceeeeeecCC------CccEEEEEE
Q psy15417 91 IRADQ------ELAMY-SHDNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDSMKTERAGILAGH------DNRVSCLGV 156 (176)
Q Consensus 91 ~~~~~------~~~~~-~~~~~~~~v~~~~~~~~-~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~------~~~i~~~~~ 156 (176)
+++.+ ..... ....+...+.+++|+|+ +.++++++.|+.+++||+..++....+..+ ...+.+++|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 222 (416)
T 2pm9_A 143 MNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEW 222 (416)
T ss_dssp TTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEE
T ss_pred CCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEE
Confidence 98765 22211 11223356889999999 789999999999999999988888877766 778999999
Q ss_pred eCCC-CEEEEccCCC---cEEEeC
Q psy15417 157 TEDG-MAVATGSWDS---FLRIWN 176 (176)
Q Consensus 157 ~~~~-~~l~tg~~d~---~v~vwd 176 (176)
+|++ .++++++.|+ .|++||
T Consensus 223 ~~~~~~~l~~~~~d~~~~~i~~~d 246 (416)
T 2pm9_A 223 HPKNSTRVATATGSDNDPSILIWD 246 (416)
T ss_dssp CSSCTTEEEEEECCSSSCCCCEEE
T ss_pred CCCCCCEEEEEECCCCCceEEEEe
Confidence 9997 6899999999 999996
No 87
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=1.1e-26 Score=179.22 Aligned_cols=162 Identities=20% Similarity=0.361 Sum_probs=138.3
Q ss_pred CcccCCCccCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCee-------eeEecCCCCCeeEEEEcc-CCcEEEEeeCC
Q psy15417 13 SPAASGHTGDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSC-------KQTFPGHESDINAVTFFP-NGWAFATGSDD 83 (176)
Q Consensus 13 ~~~~~gh~~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~-------~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d 83 (176)
...+.+|...|.+++|+|++. +|++|+.||.|++||++++.. ...+.+|...|.+++|+| ++..|++++.|
T Consensus 174 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d 253 (430)
T 2xyi_A 174 DLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD 253 (430)
T ss_dssp SEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT
T ss_pred cEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC
Confidence 334678999999999999988 999999999999999987432 456778999999999999 67899999999
Q ss_pred CcEEEeeCCCCC---eeeEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCC-ceeeeeecCCCccEEEEEEeC
Q psy15417 84 ATCRLFDIRADQ---ELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMK-TERAGILAGHDNRVSCLGVTE 158 (176)
Q Consensus 84 ~~i~iwd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~ 158 (176)
+.|++||+++.. ...... .+...+++++|+|++. ++++|+.|+.|++||+.. ..++..+..|...|.+++|+|
T Consensus 254 g~i~i~d~~~~~~~~~~~~~~--~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp 331 (430)
T 2xyi_A 254 QKLMIWDTRNNNTSKPSHTVD--AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 331 (430)
T ss_dssp SEEEEEETTCSCSSSCSEEEE--CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECS
T ss_pred CeEEEEECCCCCCCcceeEee--cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECC
Confidence 999999998763 333322 2335689999999987 788999999999999887 566778888999999999999
Q ss_pred CCC-EEEEccCCCcEEEeC
Q psy15417 159 DGM-AVATGSWDSFLRIWN 176 (176)
Q Consensus 159 ~~~-~l~tg~~d~~v~vwd 176 (176)
++. +|++++.|+.|++||
T Consensus 332 ~~~~~l~s~~~d~~i~iwd 350 (430)
T 2xyi_A 332 HNETILASSGTDRRLHVWD 350 (430)
T ss_dssp SCTTEEEEEETTSCCEEEE
T ss_pred CCCCEEEEEeCCCcEEEEe
Confidence 984 689999999999996
No 88
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.9e-26 Score=173.88 Aligned_cols=157 Identities=19% Similarity=0.341 Sum_probs=137.9
Q ss_pred CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCee
Q psy15417 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL 97 (176)
Q Consensus 18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~ 97 (176)
+|.+.|.+++|+|++.+|++++.||.|++|| .+++....+.+|..+|.+++|+|++..|++++.|+.+++||+++++.+
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 184 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVM 184 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEE
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEE
Confidence 4788999999999999999999999999999 677888899999999999999999999999999999999999766543
Q ss_pred eEEee------------------------------------------------------cceEeceEEEEECCCCcEEEE
Q psy15417 98 AMYSH------------------------------------------------------DNIICGITSVAFSRSGRLLLA 123 (176)
Q Consensus 98 ~~~~~------------------------------------------------------~~~~~~v~~~~~~~~~~~l~~ 123 (176)
..+.. ..+...+.++.|+|++.++++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 264 (425)
T 1r5m_A 185 QHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLS 264 (425)
T ss_dssp EEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEE
T ss_pred EEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEE
Confidence 32211 011235789999999999999
Q ss_pred EcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 124 GYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 124 g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
++.|+.+++||+..++....+..|...+.+++|+|++ .+++++.|+.|++||
T Consensus 265 ~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d 316 (425)
T 1r5m_A 265 ASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWS 316 (425)
T ss_dssp EETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEE
T ss_pred EcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEE
Confidence 9999999999999888888888899999999999999 999999999999996
No 89
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.95 E-value=3e-26 Score=175.16 Aligned_cols=155 Identities=18% Similarity=0.322 Sum_probs=136.5
Q ss_pred CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe-
Q psy15417 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE- 96 (176)
Q Consensus 18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~- 96 (176)
.|.+.|.+++|+|++.+|++|+.||.|++||+.+++....+.+|...|.+++| ++..+++++.|+.|++||++....
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~ 209 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQ 209 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCE
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcce
Confidence 48899999999999999999999999999999999999999999999999999 567999999999999999985433
Q ss_pred eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCC-CEEEEcc--CCCcEE
Q psy15417 97 LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG-MAVATGS--WDSFLR 173 (176)
Q Consensus 97 ~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~tg~--~d~~v~ 173 (176)
...+ ..+...+.++.|+|++.++++|+.|+.+++||+..++....+..|...|.+++|+|++ ..+++|+ .|+.|+
T Consensus 210 ~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~ 287 (401)
T 4aez_A 210 IGTL--QGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIH 287 (401)
T ss_dssp EEEE--ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEE
T ss_pred eeEE--cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEE
Confidence 3332 2233578899999999999999999999999999888888888999999999999975 5666654 899999
Q ss_pred EeC
Q psy15417 174 IWN 176 (176)
Q Consensus 174 vwd 176 (176)
+||
T Consensus 288 i~d 290 (401)
T 4aez_A 288 FWN 290 (401)
T ss_dssp EEE
T ss_pred EEE
Confidence 996
No 90
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.95 E-value=9.7e-27 Score=179.08 Aligned_cols=154 Identities=14% Similarity=0.293 Sum_probs=128.4
Q ss_pred cCeEEEEEcCCC--CEEEEEeCCCeEEEEEcCCCeee---------------------------------------eE-e
Q psy15417 21 GDVMSLSLAPDM--RTFVSGACDASAKLWDIRDGSCK---------------------------------------QT-F 58 (176)
Q Consensus 21 ~~V~~~~~~~~~--~~l~s~s~dg~v~~wd~~~~~~~---------------------------------------~~-~ 58 (176)
+.|.+++|+|++ ..|++++.|++|++||+.+++.. .. .
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 889999999998 79999999999999999764432 12 3
Q ss_pred cCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC-eeeEE-----eecceEeceEEEEECCCC-cEEEEEcCCCeEE
Q psy15417 59 PGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMY-----SHDNIICGITSVAFSRSG-RLLLAGYDDFNCN 131 (176)
Q Consensus 59 ~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~-~~~~~-----~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~ 131 (176)
.+|...|.+++|+|+++.|+++ .|+.|++||++... ..... ....+...+.+++|+|++ .++++|+.|++|+
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~ 252 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIR 252 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEE
T ss_pred cCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEE
Confidence 6799999999999999999998 79999999998432 22222 122344568999999998 8999999999999
Q ss_pred EEeCCCcee----eeeecCCCc------------cEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 132 VWDSMKTER----AGILAGHDN------------RVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 132 v~d~~~~~~----~~~~~~~~~------------~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
+||+..++. ...+..|.. .|.+++|+|++.+|++++. +.|++||
T Consensus 253 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd 312 (447)
T 3dw8_B 253 LCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWD 312 (447)
T ss_dssp EEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEE
T ss_pred EEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEe
Confidence 999888775 667777775 8999999999999999999 9999996
No 91
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.95 E-value=1.1e-26 Score=173.65 Aligned_cols=159 Identities=20% Similarity=0.251 Sum_probs=135.3
Q ss_pred ccCCCccCeEEEEE------cCCCCEEEEEeCCCeEEEEEcCCCe-eeeEecCCCC----CeeEEE----EccCCcEEEE
Q psy15417 15 AASGHTGDVMSLSL------APDMRTFVSGACDASAKLWDIRDGS-CKQTFPGHES----DINAVT----FFPNGWAFAT 79 (176)
Q Consensus 15 ~~~gh~~~V~~~~~------~~~~~~l~s~s~dg~v~~wd~~~~~-~~~~~~~h~~----~v~~v~----~~~~~~~l~s 79 (176)
.+.+|.+.|.+++| +|++.+|++++.||.|++||+++++ ....+..|.+ .+.+++ |+|++..+++
T Consensus 106 ~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~ 185 (357)
T 3i2n_A 106 SVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCA 185 (357)
T ss_dssp EECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEE
T ss_pred EEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEE
Confidence 46789999999955 6889999999999999999999887 6777876654 788998 6789999999
Q ss_pred eeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECC---CCcEEEEEcCCCeEEEEeCCCceeeeeec-----CCCccE
Q psy15417 80 GSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR---SGRLLLAGYDDFNCNVWDSMKTERAGILA-----GHDNRV 151 (176)
Q Consensus 80 ~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~g~~d~~i~v~d~~~~~~~~~~~-----~~~~~i 151 (176)
++.|+.|++||+++.+......+. ..+.++.|+| ++..+++++.|+.+++||+...+....+. +|...|
T Consensus 186 ~~~d~~i~i~d~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v 262 (357)
T 3i2n_A 186 GYDNGDIKLFDLRNMALRWETNIK---NGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTV 262 (357)
T ss_dssp EETTSEEEEEETTTTEEEEEEECS---SCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCE
T ss_pred EccCCeEEEEECccCceeeecCCC---CceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCE
Confidence 999999999999987764443333 4688999999 89999999999999999987766555444 899999
Q ss_pred EEEEEeCCCC-EEEEccCCCcEEEeC
Q psy15417 152 SCLGVTEDGM-AVATGSWDSFLRIWN 176 (176)
Q Consensus 152 ~~~~~~~~~~-~l~tg~~d~~v~vwd 176 (176)
.+++|+|++. +|++|+.|+.|++||
T Consensus 263 ~~~~~~~~~~~~l~~~~~dg~i~iwd 288 (357)
T 3i2n_A 263 WQVRHLPQNRELFLTAGGAGGLHLWK 288 (357)
T ss_dssp EEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred EEEEECCCCCcEEEEEeCCCcEEEee
Confidence 9999999988 899999999999996
No 92
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.95 E-value=3.7e-27 Score=178.90 Aligned_cols=161 Identities=9% Similarity=0.064 Sum_probs=139.2
Q ss_pred ccCCCccCeEEEEEcCC----C---CEEEEEeCCCeEEEEEcCCCee-----eeEecCC-----CCCeeEEEEc----cC
Q psy15417 15 AASGHTGDVMSLSLAPD----M---RTFVSGACDASAKLWDIRDGSC-----KQTFPGH-----ESDINAVTFF----PN 73 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~----~---~~l~s~s~dg~v~~wd~~~~~~-----~~~~~~h-----~~~v~~v~~~----~~ 73 (176)
.+.+|...|.+++|+|+ + .+|++++.||.|++||+.+++. ...+..| ...|.+++|+ |+
T Consensus 57 ~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 136 (397)
T 1sq9_A 57 SHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRL 136 (397)
T ss_dssp EEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC---
T ss_pred EEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCC
Confidence 45689999999999999 9 9999999999999999998887 8888888 5899999999 99
Q ss_pred CcE-EEEeeCCCcEEEeeCCC------CCeee-----EEee-----cceEeceEEEEECCCCcEEEEEcCCCeEEEEeCC
Q psy15417 74 GWA-FATGSDDATCRLFDIRA------DQELA-----MYSH-----DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136 (176)
Q Consensus 74 ~~~-l~s~s~d~~i~iwd~~~------~~~~~-----~~~~-----~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~ 136 (176)
+.. |++++.|+.|++||++. .+.+. .+.. ..+...+.++.|+|++ .+++++.|+.+++||+.
T Consensus 137 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~ 215 (397)
T 1sq9_A 137 LSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELS 215 (397)
T ss_dssp -CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETT
T ss_pred CceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECC
Confidence 999 99999999999999987 54443 3321 2233568899999999 99999999999999999
Q ss_pred CceeeeeecC---C---CccEEEEEEeCCCCEEEEccCC---CcEEEeC
Q psy15417 137 KTERAGILAG---H---DNRVSCLGVTEDGMAVATGSWD---SFLRIWN 176 (176)
Q Consensus 137 ~~~~~~~~~~---~---~~~i~~~~~~~~~~~l~tg~~d---~~v~vwd 176 (176)
..+.+..+.. | ...+.+++|+|++.+|++++.| +.|++||
T Consensus 216 ~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d 264 (397)
T 1sq9_A 216 TLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYE 264 (397)
T ss_dssp TTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEE
T ss_pred CCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEE
Confidence 8988888888 8 8999999999999999999999 9999996
No 93
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.95 E-value=2.7e-26 Score=188.36 Aligned_cols=161 Identities=25% Similarity=0.425 Sum_probs=144.8
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-eeeeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG-SCKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIR 92 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~ 92 (176)
.+.+|.+.|.+++|+|++.+|++++.||+|++||++++ .....+.+|..+|.+++|+| ++..+++++.|+.|++||++
T Consensus 92 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~ 171 (814)
T 3mkq_A 92 DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG 171 (814)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred EEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 35789999999999999999999999999999999987 77888999999999999999 88999999999999999998
Q ss_pred CCCeeeEEeecceEeceEEEEECC--CCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417 93 ADQELAMYSHDNIICGITSVAFSR--SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDS 170 (176)
Q Consensus 93 ~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~ 170 (176)
++.......... ...+..+.|+| ++.++++++.|+.+++||...++....+.+|...+.+++|+|++.+|++|+.|+
T Consensus 172 ~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 250 (814)
T 3mkq_A 172 QSTPNFTLTTGQ-ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG 250 (814)
T ss_dssp CSSCSEEEECCC-TTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTS
T ss_pred CCcceeEEecCC-CCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC
Confidence 776554433221 13577899999 899999999999999999999999999999999999999999999999999999
Q ss_pred cEEEeC
Q psy15417 171 FLRIWN 176 (176)
Q Consensus 171 ~v~vwd 176 (176)
.|++||
T Consensus 251 ~v~vwd 256 (814)
T 3mkq_A 251 TLKIWN 256 (814)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 999996
No 94
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=7.7e-26 Score=174.59 Aligned_cols=160 Identities=27% Similarity=0.382 Sum_probs=137.7
Q ss_pred ccCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCC---eeeeEecCCCCCeeEEEEccCCc-EEEEeeCCCcEEEe
Q psy15417 15 AASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDG---SCKQTFPGHESDINAVTFFPNGW-AFATGSDDATCRLF 89 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~---~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iw 89 (176)
.+.+|...|.+++|+| ++.+|++++.||.|++||++++ +....+..|...|++++|+|++. .+++++.|+.|++|
T Consensus 226 ~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vw 305 (430)
T 2xyi_A 226 IFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 305 (430)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred eecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEE
Confidence 4668999999999999 6789999999999999999987 56778889999999999999886 79999999999999
Q ss_pred eCCCC-CeeeEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCC--------------ceeeeeecCCCccEEE
Q psy15417 90 DIRAD-QELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMK--------------TERAGILAGHDNRVSC 153 (176)
Q Consensus 90 d~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~--------------~~~~~~~~~~~~~i~~ 153 (176)
|++.. +.+..+. .+...+.++.|+|++. ++++++.|+.|++||+.. .+.+..+.+|...|.+
T Consensus 306 d~~~~~~~~~~~~--~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 383 (430)
T 2xyi_A 306 DLRNLKLKLHSFE--SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 383 (430)
T ss_dssp ETTCTTSCSEEEE--CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEE
T ss_pred eCCCCCCCeEEee--cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceE
Confidence 99874 3344433 2234688999999985 789999999999999865 2556677789999999
Q ss_pred EEEeCCCC-EEEEccCCCcEEEeC
Q psy15417 154 LGVTEDGM-AVATGSWDSFLRIWN 176 (176)
Q Consensus 154 ~~~~~~~~-~l~tg~~d~~v~vwd 176 (176)
++|+|++. +|++++.|+.|++|+
T Consensus 384 ~~~~p~~~~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 384 FSWNPNEPWIICSVSEDNIMQVWQ 407 (430)
T ss_dssp EEECSSSTTEEEEEETTSEEEEEE
T ss_pred EEECCCCCCEEEEEECCCCEEEeE
Confidence 99999998 899999999999995
No 95
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=7.1e-27 Score=175.27 Aligned_cols=152 Identities=11% Similarity=0.037 Sum_probs=126.0
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcC---------CCeeeeEec-CCCCCeeEEEEcc--CCcEEEEeeCCCcEE
Q psy15417 20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIR---------DGSCKQTFP-GHESDINAVTFFP--NGWAFATGSDDATCR 87 (176)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~---------~~~~~~~~~-~h~~~v~~v~~~~--~~~~l~s~s~d~~i~ 87 (176)
...|.++.|+|+ +++++.|++|++|+.. +++.+..+. +|..+|.+++|+| ++.++++++.|++|+
T Consensus 76 ~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~ 152 (343)
T 3lrv_A 76 TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIG 152 (343)
T ss_dssp EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEE
T ss_pred cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEE
Confidence 356667778877 9999999999999665 444444443 6778999999999 999999999999999
Q ss_pred EeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceee-eeecC-CCccEEEEEEeCCCCEEEE
Q psy15417 88 LFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERA-GILAG-HDNRVSCLGVTEDGMAVAT 165 (176)
Q Consensus 88 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~-~~~~~-~~~~i~~~~~~~~~~~l~t 165 (176)
+||+++++........ ....+.+++|+|++.++++|+.|+.|++||+.+++.. ..+.. |...|.+++|+|++.+|++
T Consensus 153 ~wd~~~~~~~~~~~~~-~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s 231 (343)
T 3lrv_A 153 FQSYEDDSQYIVHSAK-SDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVV 231 (343)
T ss_dssp EEESSSSCEEEEECCC-SSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEE
T ss_pred EEECCCCcEEEEEecC-CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEE
Confidence 9999987765443222 2235889999999999999999999999999888776 66777 9999999999999999999
Q ss_pred ccCCCcEEEeC
Q psy15417 166 GSWDSFLRIWN 176 (176)
Q Consensus 166 g~~d~~v~vwd 176 (176)
++.+ .|++||
T Consensus 232 ~~~~-~v~iwd 241 (343)
T 3lrv_A 232 ECDQ-TVVCFD 241 (343)
T ss_dssp EESS-BEEEEE
T ss_pred EeCC-eEEEEE
Confidence 9955 999997
No 96
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.2e-26 Score=191.99 Aligned_cols=155 Identities=12% Similarity=0.079 Sum_probs=135.8
Q ss_pred cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417 16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 95 (176)
..||.+.|++++|+|++.+|++|+.||+|++||..+.++...+. |..+|.+++|+| +.+|++++.|++|++||+++++
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~ 90 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK 90 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCc
Confidence 45899999999999999999999999999999998887666554 788999999999 8899999999999999999887
Q ss_pred eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceee-----------eeecCCCccEEEEEEeCC-CCEE
Q psy15417 96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERA-----------GILAGHDNRVSCLGVTED-GMAV 163 (176)
Q Consensus 96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~-----------~~~~~~~~~i~~~~~~~~-~~~l 163 (176)
.+..+.+. ..|.+++|+|++.++++|+.|++|++||+..++.. ....+|...|.+++|+|+ +..+
T Consensus 91 ~~~~~~~~---~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 91 VLTTVFVP---GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp EEEEEECS---SCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred EEEEEcCC---CCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 76665433 36889999999999999999999999998877653 234578899999999996 4689
Q ss_pred EEccCCCcEEEeC
Q psy15417 164 ATGSWDSFLRIWN 176 (176)
Q Consensus 164 ~tg~~d~~v~vwd 176 (176)
++|+.|+.| +||
T Consensus 168 ~~g~~dg~v-lWd 179 (902)
T 2oaj_A 168 LISYEYVTL-TYS 179 (902)
T ss_dssp EEECSSCEE-EEE
T ss_pred EEEeCCCcE-EEE
Confidence 999999999 996
No 97
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.1e-26 Score=183.80 Aligned_cols=158 Identities=13% Similarity=0.043 Sum_probs=130.2
Q ss_pred cCCCccCeEEEEEcCC------CCEEEEEeCCCeEEEEEcCCCee-----------eeEecCCCCCeeEEEEccCCcEEE
Q psy15417 16 ASGHTGDVMSLSLAPD------MRTFVSGACDASAKLWDIRDGSC-----------KQTFPGHESDINAVTFFPNGWAFA 78 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~------~~~l~s~s~dg~v~~wd~~~~~~-----------~~~~~~h~~~v~~v~~~~~~~~l~ 78 (176)
+.+|.+.|.+++|+|+ +.+|++++.||+|++||+.+++. ..++.+|..+|++++|+|++ .|+
T Consensus 203 l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~la 281 (524)
T 2j04_B 203 IVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVV 281 (524)
T ss_dssp EEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEE
T ss_pred EEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEE
Confidence 4567899999999996 57999999999999999987642 24778899999999999865 799
Q ss_pred EeeCCCcEEEeeCCCCCee-eEEeecceEeceEEE--EECCCC-cEEEEEcCCCeEEEEeCCCceeeeeecCCCc--cEE
Q psy15417 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSV--AFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILAGHDN--RVS 152 (176)
Q Consensus 79 s~s~d~~i~iwd~~~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~--~i~ 152 (176)
+|+.||+|++||++++... ..+. .+...|.++ .|+|++ .+|++|+.|+++++||+...+....+.+|.. .+.
T Consensus 282 sgs~DgtV~lWD~~~~~~~~~~~~--~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~ 359 (524)
T 2j04_B 282 CGFKNGFVAEFDLTDPEVPSFYDQ--VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLV 359 (524)
T ss_dssp EEETTSEEEEEETTBCSSCSEEEE--CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCC
T ss_pred EEeCCCEEEEEECCCCCCceEEee--cccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCccc
Confidence 9999999999999865332 2222 223467888 578887 8999999999999999887776666666653 478
Q ss_pred EEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 153 CLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 153 ~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
+++|+|++..+++++.|++|++||
T Consensus 360 ~v~fsp~~~~l~s~~~d~tv~lwd 383 (524)
T 2j04_B 360 PVVYCPQIYSYIYSDGASSLRAVP 383 (524)
T ss_dssp CEEEETTTTEEEEECSSSEEEEEE
T ss_pred ceEeCCCcCeEEEeCCCCcEEEEE
Confidence 899999999999999999999996
No 98
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.95 E-value=9.5e-26 Score=165.68 Aligned_cols=157 Identities=19% Similarity=0.234 Sum_probs=136.7
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
.+.+|.+.|.+++| +++.+|++|+.||.|++||+.+++....+..|...|.+++|+|++..+++++.|+.+++|++...
T Consensus 13 ~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~ 91 (313)
T 3odt_A 13 TLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFAT 91 (313)
T ss_dssp EECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCC
T ss_pred HhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeec
Confidence 46899999999999 99999999999999999999999999999999999999999999999999999999999998754
Q ss_pred Cee-eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeC-CCCEEEEccCCCcE
Q psy15417 95 QEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTE-DGMAVATGSWDSFL 172 (176)
Q Consensus 95 ~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~tg~~d~~v 172 (176)
... .......+...+.++.| ++..+++++.|+.+++|| ..+....+..|...+.++++.| ++..+++++.|+.|
T Consensus 92 ~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i 167 (313)
T 3odt_A 92 SGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTI 167 (313)
T ss_dssp TTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCE
T ss_pred CCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCE
Confidence 321 11222333356788888 567999999999999999 6677778888999999999988 89999999999999
Q ss_pred EEeC
Q psy15417 173 RIWN 176 (176)
Q Consensus 173 ~vwd 176 (176)
++||
T Consensus 168 ~i~d 171 (313)
T 3odt_A 168 KLWQ 171 (313)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9996
No 99
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=5e-27 Score=179.46 Aligned_cols=162 Identities=16% Similarity=0.187 Sum_probs=115.5
Q ss_pred ccCCCccCeEEEEEcC--------CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCC-cEEEEeeCCCc
Q psy15417 15 AASGHTGDVMSLSLAP--------DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WAFATGSDDAT 85 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~--------~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~d~~ 85 (176)
.+.||.+.|++++|+| |+++|++|+.|++|++||++++.....+.+|..+|.+++|+|++ .+|++++.|++
T Consensus 131 ~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~ 210 (393)
T 4gq1_A 131 GKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGN 210 (393)
T ss_dssp TTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSE
T ss_pred ccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCE
Confidence 4789999999999998 78999999999999999999988888888899999999999986 58999999999
Q ss_pred EEEeeCCCCCeeeEEee-----------------------cceEeceEEEEEC-CCCcEEEEEcCCCeEEEEeCCCceee
Q psy15417 86 CRLFDIRADQELAMYSH-----------------------DNIICGITSVAFS-RSGRLLLAGYDDFNCNVWDSMKTERA 141 (176)
Q Consensus 86 i~iwd~~~~~~~~~~~~-----------------------~~~~~~v~~~~~~-~~~~~l~~g~~d~~i~v~d~~~~~~~ 141 (176)
|++||+++++....... ..+...+.++.|. |++..+++++.|+++++||+..++..
T Consensus 211 v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~ 290 (393)
T 4gq1_A 211 IRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDY 290 (393)
T ss_dssp EEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC------
T ss_pred EEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCC
Confidence 99999987654321110 0111245567775 79999999999999999998777665
Q ss_pred eeecCCCccEEEEEE------------------eC--CCCEEEEccCCCcEEEeC
Q psy15417 142 GILAGHDNRVSCLGV------------------TE--DGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 142 ~~~~~~~~~i~~~~~------------------~~--~~~~l~tg~~d~~v~vwd 176 (176)
..+..|...+..+.+ .| ++.++++|+.|++|++||
T Consensus 291 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd 345 (393)
T 4gq1_A 291 NEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLIN 345 (393)
T ss_dssp -------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEE
T ss_pred ceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEE
Confidence 555555444433333 22 344678899999999996
No 100
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.3e-25 Score=163.61 Aligned_cols=154 Identities=18% Similarity=0.374 Sum_probs=136.4
Q ss_pred cCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecC-CCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417 16 ASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPG-HESDINAVTFFPNGWAFATGSDDATCRLFDIRA 93 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 93 (176)
+.+|...|.++.|+| ++.++++++.||.+++|| ..+....+.. |...+.+++|+|++. +++++.|+.|++||+++
T Consensus 138 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~ 214 (313)
T 3odt_A 138 LQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHT 214 (313)
T ss_dssp EECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTT
T ss_pred cccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCc
Confidence 467999999999988 899999999999999999 4566777777 899999999999998 99999999999999998
Q ss_pred CCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417 94 DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173 (176)
Q Consensus 94 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~ 173 (176)
++.+..+. .+...+.+++|+|++ .+++++.|+.+++||+.+++....+..|...+.+++|+|++. +++++.|+.|+
T Consensus 215 ~~~~~~~~--~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~ 290 (313)
T 3odt_A 215 GDVLRTYE--GHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVR 290 (313)
T ss_dssp CCEEEEEE--CCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEE
T ss_pred hhhhhhhh--cCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEE
Confidence 87765543 223468899999999 588999999999999999999999999999999999999998 56789999999
Q ss_pred EeC
Q psy15417 174 IWN 176 (176)
Q Consensus 174 vwd 176 (176)
+||
T Consensus 291 iw~ 293 (313)
T 3odt_A 291 IFS 293 (313)
T ss_dssp EEE
T ss_pred EEe
Confidence 996
No 101
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.95 E-value=4.7e-26 Score=170.11 Aligned_cols=159 Identities=18% Similarity=0.246 Sum_probs=134.8
Q ss_pred CCCccCeEEEEEcCC---CCEEEEEeCCCeEEEEEcCCCe-eeeEecCCCCCeeEEEE------ccCCcEEEEeeCCCcE
Q psy15417 17 SGHTGDVMSLSLAPD---MRTFVSGACDASAKLWDIRDGS-CKQTFPGHESDINAVTF------FPNGWAFATGSDDATC 86 (176)
Q Consensus 17 ~gh~~~V~~~~~~~~---~~~l~s~s~dg~v~~wd~~~~~-~~~~~~~h~~~v~~v~~------~~~~~~l~s~s~d~~i 86 (176)
.+|...|.+++|+|+ +.+|++|+.||.|++||+++++ ....+.+|...|.+++| +|++..|++++.|+.|
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i 141 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTV 141 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCE
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeE
Confidence 379999999999998 6999999999999999999988 88899999999999955 6789999999999999
Q ss_pred EEeeCCCCC-eeeEEee-cc-eEeceEEEE----ECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeC-
Q psy15417 87 RLFDIRADQ-ELAMYSH-DN-IICGITSVA----FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTE- 158 (176)
Q Consensus 87 ~iwd~~~~~-~~~~~~~-~~-~~~~v~~~~----~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~- 158 (176)
++||+++++ ....+.. .. ....+.++. |+|++.++++++.|+.+++||+..++... ...|...+.+++|+|
T Consensus 142 ~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~ 220 (357)
T 3i2n_A 142 KVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRW-ETNIKNGVCSLEFDRK 220 (357)
T ss_dssp EEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEESCS
T ss_pred EEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceee-ecCCCCceEEEEcCCC
Confidence 999998775 3444322 21 123566777 78999999999999999999998877644 356888999999999
Q ss_pred --CCCEEEEccCCCcEEEeC
Q psy15417 159 --DGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 159 --~~~~l~tg~~d~~v~vwd 176 (176)
++.+|++|+.|+.|++||
T Consensus 221 ~~~~~~l~~~~~dg~i~i~d 240 (357)
T 3i2n_A 221 DISMNKLVATSLEGKFHVFD 240 (357)
T ss_dssp SSSCCEEEEEESTTEEEEEE
T ss_pred CCCCCEEEEECCCCeEEEEe
Confidence 899999999999999996
No 102
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=6.8e-26 Score=178.42 Aligned_cols=151 Identities=9% Similarity=0.107 Sum_probs=125.1
Q ss_pred CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCC-----CeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHES-----DINAVTFFPNGWAFATGSDDATCRLFDIR 92 (176)
Q Consensus 18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~-----~v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 92 (176)
+|+..|.+++|||+|+.|++++.||+|++||.++ +...+. |.. .|.+++|+|+|+.|++|+.||+|++||+.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 6788999999999999999999999999999654 666677 665 49999999999999999999999999998
Q ss_pred CCCe-------eeEEe--ecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCcee---eeee-cCCCccEEEEEEeCC
Q psy15417 93 ADQE-------LAMYS--HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER---AGIL-AGHDNRVSCLGVTED 159 (176)
Q Consensus 93 ~~~~-------~~~~~--~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~---~~~~-~~~~~~i~~~~~~~~ 159 (176)
++.. +..+. ...+...|.+++|+|++ +++++.|+++++||+..++. ..++ .+|...|.+++|+
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-- 235 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-- 235 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--
T ss_pred CCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--
Confidence 7642 22221 13344579999999999 78888999999999877653 2345 4788899999999
Q ss_pred CCEEEEccCCCcEEEeC
Q psy15417 160 GMAVATGSWDSFLRIWN 176 (176)
Q Consensus 160 ~~~l~tg~~d~~v~vwd 176 (176)
+..||+++ +++|++||
T Consensus 236 g~~LASa~-~~tIkLWd 251 (588)
T 2j04_A 236 DYKVVLTC-PGYVHKID 251 (588)
T ss_dssp TTEEEEEC-SSEEEEEE
T ss_pred CCEEEEEe-CCeEEEEE
Confidence 58999887 69999996
No 103
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.94 E-value=3.3e-26 Score=170.33 Aligned_cols=158 Identities=11% Similarity=0.092 Sum_probs=134.8
Q ss_pred ccCC--CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC---------CeeeeEecCCCCCeeEEEEccCCcEEEEeeCC
Q psy15417 15 AASG--HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD---------GSCKQTFPGHESDINAVTFFPNGWAFATGSDD 83 (176)
Q Consensus 15 ~~~g--h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~---------~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d 83 (176)
.+.+ |...|.+++|+| +.++++++.|+.|++||+++ ++++..+. |...|.+++|+|++ +++++.|
T Consensus 94 ~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d 169 (342)
T 1yfq_A 94 ALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNN 169 (342)
T ss_dssp ECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEEST
T ss_pred eccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCC
Confidence 4567 999999999999 99999999999999999987 77677776 88999999999887 9999999
Q ss_pred CcEEEeeCCC-CCeeeEEeecceEeceEEEEECC-CCcEEEEEcCCCeEEEEeCCCc------eeeeeecCCCc------
Q psy15417 84 ATCRLFDIRA-DQELAMYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNVWDSMKT------ERAGILAGHDN------ 149 (176)
Q Consensus 84 ~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~g~~d~~i~v~d~~~~------~~~~~~~~~~~------ 149 (176)
+.|++||+++ ...........+...+.++.|+| ++.++++++.++.+++|+.... +....+..|..
T Consensus 170 ~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (342)
T 1yfq_A 170 SQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTN 249 (342)
T ss_dssp TEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCS
T ss_pred CeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccc
Confidence 9999999987 54322222222234688999999 9999999999999999998776 66667777755
Q ss_pred ---cEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 150 ---RVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 150 ---~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
.|.+++|+|++.+|++|+.|+.|++||
T Consensus 250 ~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd 279 (342)
T 1yfq_A 250 LAYPVNSIEFSPRHKFLYTAGSDGIISCWN 279 (342)
T ss_dssp SCCCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred cceeEEEEEEcCCCCEEEEecCCceEEEEc
Confidence 899999999999999999999999996
No 104
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=2.5e-25 Score=167.96 Aligned_cols=160 Identities=10% Similarity=0.074 Sum_probs=117.5
Q ss_pred cCCCccCeEEEEEcCCCCEEEEEe----------------------------------------CCCeEEEEEcCCCeee
Q psy15417 16 ASGHTGDVMSLSLAPDMRTFVSGA----------------------------------------CDASAKLWDIRDGSCK 55 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~~~~l~s~s----------------------------------------~dg~v~~wd~~~~~~~ 55 (176)
..+|...|++++|+||+.+|++|+ .|++|++||.++++++
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~ 94 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDV 94 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEE
T ss_pred cccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEE
Confidence 356778888888888777665554 3446666666666666
Q ss_pred eEecCCCCCeeEEEEccCC-----------------------------------cEEEE--eeCCCcEEEeeCCCCCeee
Q psy15417 56 QTFPGHESDINAVTFFPNG-----------------------------------WAFAT--GSDDATCRLFDIRADQELA 98 (176)
Q Consensus 56 ~~~~~h~~~v~~v~~~~~~-----------------------------------~~l~s--~s~d~~i~iwd~~~~~~~~ 98 (176)
..+. +..+|.+++|+++. ..++. ++.||.|++||++++....
T Consensus 95 ~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~ 173 (355)
T 3vu4_A 95 SRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSAT 173 (355)
T ss_dssp EEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC-----
T ss_pred EEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccc
Confidence 6665 55678888887653 12222 5677888888877543100
Q ss_pred --------------EEeecceEeceEEEEECCCCcEEEEEcCCCe-EEEEeCCCceeeeeec-C-CCccEEEEEEeCCCC
Q psy15417 99 --------------MYSHDNIICGITSVAFSRSGRLLLAGYDDFN-CNVWDSMKTERAGILA-G-HDNRVSCLGVTEDGM 161 (176)
Q Consensus 99 --------------~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~-i~v~d~~~~~~~~~~~-~-~~~~i~~~~~~~~~~ 161 (176)
......+...|.+++|+|++.+|++|+.|++ +++||+.+++++..+. + |...|.+++|+|++.
T Consensus 174 ~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~ 253 (355)
T 3vu4_A 174 TQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGS 253 (355)
T ss_dssp -------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSC
T ss_pred cccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCC
Confidence 1112333457899999999999999999998 9999999999988887 5 999999999999999
Q ss_pred EEEEccCCCcEEEeC
Q psy15417 162 AVATGSWDSFLRIWN 176 (176)
Q Consensus 162 ~l~tg~~d~~v~vwd 176 (176)
+|++|+.|++|++||
T Consensus 254 ~l~s~s~d~~v~iw~ 268 (355)
T 3vu4_A 254 KLAVVSDKWTLHVFE 268 (355)
T ss_dssp EEEEEETTCEEEEEE
T ss_pred EEEEEECCCEEEEEE
Confidence 999999999999996
No 105
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.94 E-value=1.4e-25 Score=178.51 Aligned_cols=158 Identities=15% Similarity=0.159 Sum_probs=140.5
Q ss_pred ccCCCccC-eEEEEEcC--CCCEEEEEeCCCeEEEEEcCCC--------eeeeEecCCCCCeeEEEEccCCcEEEEeeCC
Q psy15417 15 AASGHTGD-VMSLSLAP--DMRTFVSGACDASAKLWDIRDG--------SCKQTFPGHESDINAVTFFPNGWAFATGSDD 83 (176)
Q Consensus 15 ~~~gh~~~-V~~~~~~~--~~~~l~s~s~dg~v~~wd~~~~--------~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d 83 (176)
.+.+|.+. |.+++|+| ++++|++|+.||+|++||+.++ +....+..|..+|.+++|+|+++.+++++.+
T Consensus 58 ~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~ 137 (615)
T 1pgu_A 58 QFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEG 137 (615)
T ss_dssp EECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECC
T ss_pred EEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccC
Confidence 47889999 99999999 9999999999999999999754 6778889999999999999999999999988
Q ss_pred ----CcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCceeeeeecCCCc---cEEEEE
Q psy15417 84 ----ATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKTERAGILAGHDN---RVSCLG 155 (176)
Q Consensus 84 ----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~---~i~~~~ 155 (176)
+.|.+||. ++.+..+ ..+...+.++.|+|++. .+++++.|+.+++||...++....+.+|.. .|.+++
T Consensus 138 ~~~~~~v~~~d~--~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~ 213 (615)
T 1pgu_A 138 RDNFGVFISWDS--GNSLGEV--SGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVE 213 (615)
T ss_dssp SSCSEEEEETTT--CCEEEEC--CSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEE
T ss_pred CCCccEEEEEEC--CCcceee--ecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEE
Confidence 68999983 3333332 33345789999999998 899999999999999999999999999998 999999
Q ss_pred EeCC-CCEEEEccCCCcEEEeC
Q psy15417 156 VTED-GMAVATGSWDSFLRIWN 176 (176)
Q Consensus 156 ~~~~-~~~l~tg~~d~~v~vwd 176 (176)
|+|+ +.+|++|+.|+.|++||
T Consensus 214 ~~~~~~~~l~~~~~dg~i~vwd 235 (615)
T 1pgu_A 214 FSPDSGEFVITVGSDRKISCFD 235 (615)
T ss_dssp ECSTTCCEEEEEETTCCEEEEE
T ss_pred ECCCCCCEEEEEeCCCeEEEEE
Confidence 9999 99999999999999996
No 106
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.94 E-value=5.4e-26 Score=169.21 Aligned_cols=156 Identities=12% Similarity=0.081 Sum_probs=132.9
Q ss_pred cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe---eeeEecCCCCCeeEEEEccCCc-EEEEeeCCCcEEEeeC
Q psy15417 16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS---CKQTFPGHESDINAVTFFPNGW-AFATGSDDATCRLFDI 91 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~---~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~ 91 (176)
..+|.+.|.+++|+|++.+|++++.|+.|++||+.+++ ....+.+|..+|.+++|+|++. .+++++.|+.|++||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence 35799999999999999999999999999999998876 3445567999999999999999 9999999999999999
Q ss_pred -CCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC---------ceeeeeecCCCccEEEEEEeCCCC
Q psy15417 92 -RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK---------TERAGILAGHDNRVSCLGVTEDGM 161 (176)
Q Consensus 92 -~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~---------~~~~~~~~~~~~~i~~~~~~~~~~ 161 (176)
.+++...... ..+...|.++.|+| +..+++++.|+.+++||+.. .++...+. |...+.+++|+|++
T Consensus 87 ~~~~~~~~~~~-~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~- 162 (342)
T 1yfq_A 87 IGSPSFQALTN-NEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR- 162 (342)
T ss_dssp SSSSSEEECBS-CCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE-
T ss_pred ccCCceEeccc-cCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc-
Confidence 7765422222 01345788999999 99999999999999999876 55555555 88899999999886
Q ss_pred EEEEccCCCcEEEeC
Q psy15417 162 AVATGSWDSFLRIWN 176 (176)
Q Consensus 162 ~l~tg~~d~~v~vwd 176 (176)
+++++.|+.|++||
T Consensus 163 -l~~~~~d~~i~i~d 176 (342)
T 1yfq_A 163 -LIVGMNNSQVQWFR 176 (342)
T ss_dssp -EEEEESTTEEEEEE
T ss_pred -EEEEeCCCeEEEEE
Confidence 88999999999996
No 107
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.6e-25 Score=173.59 Aligned_cols=157 Identities=15% Similarity=0.051 Sum_probs=135.5
Q ss_pred CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeee----EecCCCCCeeEEEEccC---CcEEEEeeCCCcEEEee
Q psy15417 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ----TFPGHESDINAVTFFPN---GWAFATGSDDATCRLFD 90 (176)
Q Consensus 18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~----~~~~h~~~v~~v~~~~~---~~~l~s~s~d~~i~iwd 90 (176)
+|...|.+++|+|++.+|++|+.+|.+++|++.+++... .+.+|...|++++|+|+ +.+|++++.|++|++||
T Consensus 147 ~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd 226 (450)
T 2vdu_B 147 CFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISH 226 (450)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEE
T ss_pred cCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEE
Confidence 577899999999999999999999999999998876554 77889999999999999 99999999999999999
Q ss_pred CCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC------------------------
Q psy15417 91 IRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG------------------------ 146 (176)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~------------------------ 146 (176)
+++++.+..+.. .+...|.+++|+ ++.+|++++.|++|++||+.+++.+..+..
T Consensus 227 ~~~~~~~~~~~~-~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (450)
T 2vdu_B 227 YPQCFIVDKWLF-GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENND 304 (450)
T ss_dssp ESCTTCEEEECC-CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------
T ss_pred CCCCceeeeeec-CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccc
Confidence 988776544321 223468899999 999999999999999999988887666542
Q ss_pred -CCccEEEEEEeCCCCEEEEcc-CCCcEEEeC
Q psy15417 147 -HDNRVSCLGVTEDGMAVATGS-WDSFLRIWN 176 (176)
Q Consensus 147 -~~~~i~~~~~~~~~~~l~tg~-~d~~v~vwd 176 (176)
....+..++|+|++.+|++++ .|+.|++||
T Consensus 305 ~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~ 336 (450)
T 2vdu_B 305 IIEFAVSKIIKSKNLPFVAFFVEATKCIIILE 336 (450)
T ss_dssp CBCCCEEEEEECSSSSEEEEEETTCSEEEEEE
T ss_pred cceEEEEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 234688999999999999998 899999996
No 108
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.94 E-value=1.6e-25 Score=191.18 Aligned_cols=162 Identities=24% Similarity=0.392 Sum_probs=143.5
Q ss_pred ccCCCccCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417 15 AASGHTGDVMSLSLAP--DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR 92 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~--~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 92 (176)
.+.+|.+.|.+++|+| ++.++++|+.|+.|++||++++++...+.+|..+|++++|+|++..+++++.|+.|++||++
T Consensus 694 ~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~ 773 (1249)
T 3sfz_A 694 TYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVR 773 (1249)
T ss_dssp EEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGG
T ss_pred EEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCC
Confidence 3568999999999999 55689999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCeeeEEee-----------------------------------------------------cceEeceEEEEECCCCc
Q psy15417 93 ADQELAMYSH-----------------------------------------------------DNIICGITSVAFSRSGR 119 (176)
Q Consensus 93 ~~~~~~~~~~-----------------------------------------------------~~~~~~v~~~~~~~~~~ 119 (176)
+++....... ..+...+.++.|+|++.
T Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 853 (1249)
T 3sfz_A 774 SANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDH 853 (1249)
T ss_dssp GTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTT
T ss_pred CCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCC
Confidence 6543322110 01123567899999999
Q ss_pred EEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 120 LLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 120 ~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
.+++++.++.+++||..++.....+.+|...|.+++|+|++.+|++++.|+.|++||
T Consensus 854 ~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~ 910 (1249)
T 3sfz_A 854 LAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE 910 (1249)
T ss_dssp EEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 999999999999999999999999999999999999999999999999999999996
No 109
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.94 E-value=2.5e-25 Score=177.02 Aligned_cols=154 Identities=14% Similarity=0.163 Sum_probs=138.0
Q ss_pred CccCeEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCeee-eEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe
Q psy15417 19 HTGDVMSLSLAPDMRTFVSGAC-DASAKLWDIRDGSCK-QTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE 96 (176)
Q Consensus 19 h~~~V~~~~~~~~~~~l~s~s~-dg~v~~wd~~~~~~~-~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 96 (176)
|...+.+++|+ +.++++++. |+.|++||+.+++.. ..+.+|..+|++++|+|++.+|++++.|+.|++||+.+++.
T Consensus 445 ~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~ 522 (615)
T 1pgu_A 445 LNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREV 522 (615)
T ss_dssp CSSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred cCCCceEEEEc--CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcc
Confidence 77889999999 889999999 999999999987765 67788999999999999999999999999999999988766
Q ss_pred eeEEeecceEeceEEEEECC----------CCcEEEEEcCCCeEEEEeCCCc-eeeeeecCCCccEEEEEEeCCCCEEEE
Q psy15417 97 LAMYSHDNIICGITSVAFSR----------SGRLLLAGYDDFNCNVWDSMKT-ERAGILAGHDNRVSCLGVTEDGMAVAT 165 (176)
Q Consensus 97 ~~~~~~~~~~~~v~~~~~~~----------~~~~l~~g~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~t 165 (176)
+..+... +...+.+++|+| ++.++++++.|+.|++||+..+ +++..+.+|...|.+++|+|++. |++
T Consensus 523 ~~~~~~~-h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s 600 (615)
T 1pgu_A 523 KTSRWAF-RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVS 600 (615)
T ss_dssp EECCSCC-CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEE
T ss_pred eeEeecC-CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEE
Confidence 5443210 335789999999 9999999999999999999887 77888899999999999999999 999
Q ss_pred ccCCCcEEEeC
Q psy15417 166 GSWDSFLRIWN 176 (176)
Q Consensus 166 g~~d~~v~vwd 176 (176)
++.|+.|++||
T Consensus 601 ~~~d~~v~iw~ 611 (615)
T 1pgu_A 601 SGADACIKRWN 611 (615)
T ss_dssp EETTSCEEEEE
T ss_pred ecCCceEEEEe
Confidence 99999999996
No 110
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.94 E-value=6.1e-25 Score=170.26 Aligned_cols=156 Identities=22% Similarity=0.351 Sum_probs=136.6
Q ss_pred ccCCCccCeEEEEEc--CCCCEEEEEeCCCeEEEEEcCCCee-----------------------eeEecCCCCCeeEEE
Q psy15417 15 AASGHTGDVMSLSLA--PDMRTFVSGACDASAKLWDIRDGSC-----------------------KQTFPGHESDINAVT 69 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~--~~~~~l~s~s~dg~v~~wd~~~~~~-----------------------~~~~~~h~~~v~~v~ 69 (176)
.+.+|.+.|.+++|+ +++.++++|+.||+|++||+++++. ...+.+|...|.++
T Consensus 198 ~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 276 (464)
T 3v7d_B 198 VFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV- 276 (464)
T ss_dssp EECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE-
T ss_pred EECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE-
Confidence 467899999999998 5778999999999999999987652 45678898888776
Q ss_pred EccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCc
Q psy15417 70 FFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDN 149 (176)
Q Consensus 70 ~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~ 149 (176)
.+++..+++++.|+.|++||+++.+.+..+. .+...+.++.|+|++..+++|+.|+.+++||+.+++++..+.+|..
T Consensus 277 -~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~ 353 (464)
T 3v7d_B 277 -SGHGNIVVSGSYDNTLIVWDVAQMKCLYILS--GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTA 353 (464)
T ss_dssp -EEETTEEEEEETTSCEEEEETTTTEEEEEEC--CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred -cCCCCEEEEEeCCCeEEEEECCCCcEEEEec--CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCC
Confidence 6788999999999999999998877665443 2335688999999999999999999999999999999999999999
Q ss_pred cEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 150 RVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 150 ~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
.|.+++++ +.+|++|+.|+.|++||
T Consensus 354 ~v~~~~~~--~~~l~s~s~dg~v~vwd 378 (464)
T 3v7d_B 354 LVGLLRLS--DKFLVSAAADGSIRGWD 378 (464)
T ss_dssp CEEEEEEC--SSEEEEEETTSEEEEEE
T ss_pred cEEEEEEc--CCEEEEEeCCCcEEEEE
Confidence 99999997 57999999999999996
No 111
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.94 E-value=7e-25 Score=169.19 Aligned_cols=154 Identities=24% Similarity=0.492 Sum_probs=132.3
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
.+.+|.+.|.+++| ++.++++|+.||+|++||++++++...+.+|...|.+++|+ +..+++++.|+.|++||++++
T Consensus 168 ~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~ 243 (435)
T 1p22_A 168 ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASP 243 (435)
T ss_dssp EECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSS
T ss_pred EEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCC
Confidence 46789999999998 78899999999999999999999999999999999999996 459999999999999999877
Q ss_pred CeeeE-EeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417 95 QELAM-YSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173 (176)
Q Consensus 95 ~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~ 173 (176)
..... .....+...+.++.+ ++.++++|+.|+.+++||+.+++.+..+.+|...+.++++. +.++++|+.|+.|+
T Consensus 244 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~ 319 (435)
T 1p22_A 244 TDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIR 319 (435)
T ss_dssp SCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEE
T ss_pred CCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEE
Confidence 65432 122333346778887 67899999999999999998888888888999999988884 57899999999999
Q ss_pred EeC
Q psy15417 174 IWN 176 (176)
Q Consensus 174 vwd 176 (176)
+||
T Consensus 320 iwd 322 (435)
T 1p22_A 320 LWD 322 (435)
T ss_dssp EEE
T ss_pred EEE
Confidence 996
No 112
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.94 E-value=2e-24 Score=163.72 Aligned_cols=157 Identities=23% Similarity=0.354 Sum_probs=134.6
Q ss_pred CCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC---CcEEEEeeCCCcEEEeeCC
Q psy15417 17 SGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN---GWAFATGSDDATCRLFDIR 92 (176)
Q Consensus 17 ~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~---~~~l~s~s~d~~i~iwd~~ 92 (176)
.+|...|.+++|+| ++.+|++++.||.|++||+++++....+. +...+.++.+.|. +..+++++.|+.+++||++
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 174 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK 174 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC
Confidence 46999999999999 77899999999999999999999888877 6788999999985 4599999999999999998
Q ss_pred CCCeeeEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCce-eeeee---------------cCCCccEEEEE
Q psy15417 93 ADQELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKTE-RAGIL---------------AGHDNRVSCLG 155 (176)
Q Consensus 93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~~-~~~~~---------------~~~~~~i~~~~ 155 (176)
+++.+..+. .+...+.+++|+|++. ++++|+.|+.+++||+.... ....+ ..|...|.+++
T Consensus 175 ~~~~~~~~~--~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 252 (408)
T 4a11_B 175 SGSCSHILQ--GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLC 252 (408)
T ss_dssp SSCCCEEEC--CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEE
T ss_pred Ccceeeeec--CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEE
Confidence 877655443 2334688999999998 68999999999999987654 22222 56888999999
Q ss_pred EeCCCCEEEEccCCCcEEEeC
Q psy15417 156 VTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 156 ~~~~~~~l~tg~~d~~v~vwd 176 (176)
|+|++.+|++++.|+.|++||
T Consensus 253 ~~~~~~~l~~~~~dg~i~vwd 273 (408)
T 4a11_B 253 FTSDGLHLLTVGTDNRMRLWN 273 (408)
T ss_dssp ECTTSSEEEEEETTSCEEEEE
T ss_pred EcCCCCEEEEecCCCeEEEEE
Confidence 999999999999999999996
No 113
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=8.2e-26 Score=172.72 Aligned_cols=156 Identities=18% Similarity=0.151 Sum_probs=118.2
Q ss_pred CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeee-----eEecCCCCCeeEEEEcc--------CCcEEEEeeCCC
Q psy15417 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK-----QTFPGHESDINAVTFFP--------NGWAFATGSDDA 84 (176)
Q Consensus 18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~-----~~~~~h~~~v~~v~~~~--------~~~~l~s~s~d~ 84 (176)
+|...+....+++++.++++|+.|++|++||.+++++. ..+.+|...|++++|+| ++++|+++|.|+
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 34444444555566778999999999999999988643 34678999999999998 789999999999
Q ss_pred cEEEeeCCCCCeee-EEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCceeeee-------------------
Q psy15417 85 TCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKTERAGI------------------- 143 (176)
Q Consensus 85 ~i~iwd~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~~~~~~------------------- 143 (176)
+|++||++++.... .+.+. ..+.+++|+|++. ++++|+.|++|++||+.+++....
T Consensus 167 tv~~Wd~~~~~~~~~~~~~~---~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~ 243 (393)
T 4gq1_A 167 TLIIWRLTDEGPILAGYPLS---SPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLP 243 (393)
T ss_dssp EEEEEEEETTEEEEEEEECS---SCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGG
T ss_pred eEEEEECCCCceeeeecCCC---CCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccc
Confidence 99999998765543 33333 3678999999874 799999999999999876543221
Q ss_pred ------ecCCCccEEEEEEe-CCCCEEEEccCCCcEEEeC
Q psy15417 144 ------LAGHDNRVSCLGVT-EDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 144 ------~~~~~~~i~~~~~~-~~~~~l~tg~~d~~v~vwd 176 (176)
..+|...+.+++|. +++..|++++.|+++++||
T Consensus 244 ~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd 283 (393)
T 4gq1_A 244 LVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWN 283 (393)
T ss_dssp GC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEE
T ss_pred ceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEE
Confidence 13566778888886 7899999999999999996
No 114
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.93 E-value=4.2e-24 Score=165.08 Aligned_cols=152 Identities=34% Similarity=0.612 Sum_probs=133.5
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
.+.+|.+.|.++.|+ +.++++|+.||+|++||+.++++...+.+|...|.++.|+ +..+++++.|++|++||++++
T Consensus 154 ~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~ 229 (445)
T 2ovr_B 154 TLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETG 229 (445)
T ss_dssp ECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSC
T ss_pred EEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCC
Confidence 367899999999997 5699999999999999999999999999999999999995 568999999999999999887
Q ss_pred CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417 95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 174 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v 174 (176)
+.+.... .+...+.++.+ ++..+++|+.|+.+++||+.+++....+.+|...+.+++| ++.++++|+.|+.|++
T Consensus 230 ~~~~~~~--~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i 303 (445)
T 2ovr_B 230 QCLHVLM--GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRV 303 (445)
T ss_dssp CEEEEEE--CCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEE
T ss_pred cEEEEEc--CCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEE
Confidence 7665443 22346778887 6788999999999999999888888889999999999988 6789999999999999
Q ss_pred eC
Q psy15417 175 WN 176 (176)
Q Consensus 175 wd 176 (176)
||
T Consensus 304 ~d 305 (445)
T 2ovr_B 304 WD 305 (445)
T ss_dssp EE
T ss_pred EE
Confidence 96
No 115
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.93 E-value=6.2e-24 Score=163.88 Aligned_cols=151 Identities=25% Similarity=0.469 Sum_probs=130.7
Q ss_pred cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417 16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 95 (176)
..+|...|.|+.| ++.++++|+.||+|++||+.+++....+.+|..+|.+++| ++..+++|+.||+|++||+++++
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~ 204 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE 204 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc
Confidence 3467778999876 7899999999999999999999999999999999999998 78899999999999999999887
Q ss_pred eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceee---eeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417 96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERA---GILAGHDNRVSCLGVTEDGMAVATGSWDSFL 172 (176)
Q Consensus 96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v 172 (176)
.+..+. .+...+.++.|++ ..+++|+.|+.+++||+...+.. ..+.+|...|.++++ ++.++++|+.|+.|
T Consensus 205 ~~~~~~--~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i 278 (435)
T 1p22_A 205 MLNTLI--HHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTI 278 (435)
T ss_dssp EEEEEC--CCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEE
T ss_pred EEEEEc--CCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeE
Confidence 665443 2335688888864 58999999999999998876554 567789999999998 67899999999999
Q ss_pred EEeC
Q psy15417 173 RIWN 176 (176)
Q Consensus 173 ~vwd 176 (176)
++||
T Consensus 279 ~vwd 282 (435)
T 1p22_A 279 KVWN 282 (435)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9996
No 116
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.93 E-value=6.4e-24 Score=164.06 Aligned_cols=153 Identities=23% Similarity=0.441 Sum_probs=133.0
Q ss_pred cccCCCccCe-EEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417 14 PAASGHTGDV-MSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR 92 (176)
Q Consensus 14 ~~~~gh~~~V-~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 92 (176)
..+.||.+.| .++ ++++.++++|+.||+|++||+.++++...+.+|..+|.+++|+ +..+++++.|++|++||+.
T Consensus 112 ~~l~~h~~~v~~~~--~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~ 187 (445)
T 2ovr_B 112 KVLKGHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAE 187 (445)
T ss_dssp EEEECSTTSCEEEE--EEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETT
T ss_pred EEecccCCCcEEEE--EEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECC
Confidence 3578999875 554 4568999999999999999999999999999999999999997 6699999999999999998
Q ss_pred CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417 93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL 172 (176)
Q Consensus 93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v 172 (176)
+++....+. .+...+.++.++ +..+++|+.|+++++||+.+++....+.+|...+.++++ ++.++++|+.|+.|
T Consensus 188 ~~~~~~~~~--~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i 261 (445)
T 2ovr_B 188 TGECIHTLY--GHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMV 261 (445)
T ss_dssp TTEEEEEEC--CCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCE
T ss_pred cCcEEEEEC--CCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEE
Confidence 876655443 233467888885 567999999999999999999999999999999999998 67899999999999
Q ss_pred EEeC
Q psy15417 173 RIWN 176 (176)
Q Consensus 173 ~vwd 176 (176)
++||
T Consensus 262 ~iwd 265 (445)
T 2ovr_B 262 KVWD 265 (445)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9996
No 117
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.92 E-value=1.5e-23 Score=158.21 Aligned_cols=151 Identities=13% Similarity=0.125 Sum_probs=117.5
Q ss_pred EEEEEcCCCCEEEE--EeCCCeEEEEEcCCCe----------------eeeEecCCCCCeeEEEEccCCcEEEEeeCCCc
Q psy15417 24 MSLSLAPDMRTFVS--GACDASAKLWDIRDGS----------------CKQTFPGHESDINAVTFFPNGWAFATGSDDAT 85 (176)
Q Consensus 24 ~~~~~~~~~~~l~s--~s~dg~v~~wd~~~~~----------------~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~ 85 (176)
..+++++ .+++. |+.||.|++||+++++ +...+.+|..+|++++|+|++++|++++.|++
T Consensus 141 ~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~ 218 (355)
T 3vu4_A 141 GVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGT 218 (355)
T ss_dssp EEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCS
T ss_pred ceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCC
Confidence 3444555 44544 6889999999998865 26789999999999999999999999999999
Q ss_pred -EEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceee--eee------------------
Q psy15417 86 -CRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERA--GIL------------------ 144 (176)
Q Consensus 86 -i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~--~~~------------------ 144 (176)
|++||+++++.+..+....+...|.+++|+|++.+|++++.|+++++||+...... ..+
T Consensus 219 ~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (355)
T 3vu4_A 219 IIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNF 298 (355)
T ss_dssp EEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEE
T ss_pred EEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEE
Confidence 99999998887766552213357899999999999999999999999998654211 110
Q ss_pred --c-CCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 145 --A-GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 145 --~-~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
. ........++|++++..|++++.||.+++|+
T Consensus 299 ~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~ 333 (355)
T 3vu4_A 299 KLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFK 333 (355)
T ss_dssp ECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEE
T ss_pred EeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 0 0111235689999999999999999999984
No 118
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.92 E-value=1.5e-23 Score=154.31 Aligned_cols=149 Identities=21% Similarity=0.333 Sum_probs=124.1
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec--CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeE
Q psy15417 22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP--GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAM 99 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~ 99 (176)
..++|+||+++ +|++| .|++|++||+.+++++..++ +|...|++++|+|+++++++|+.|++|++||+++++.+..
T Consensus 27 y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 27 YLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp TCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred cceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence 35789999886 66655 59999999999999887765 5778899999999999999999999999999998877655
Q ss_pred EeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc-eeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 100 YSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT-ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 100 ~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
+.. +...+.+ +++++..+++++.++.+++|+.... .....+.+|...+..+++.+++.+|++++.|++|++||
T Consensus 105 ~~~--h~~~~~~--~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd 178 (318)
T 4ggc_A 105 MTS--HSARVGS--LSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP 178 (318)
T ss_dssp EEC--CSSCEEE--EEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ecC--ccceEEE--eecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEE
Confidence 432 2223444 4456689999999999999997664 45667788999999999999999999999999999996
No 119
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.92 E-value=5.7e-24 Score=167.52 Aligned_cols=148 Identities=10% Similarity=0.151 Sum_probs=123.4
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe-------eeeEe----cCCCCCeeEEEEccCCcEEEEeeCCCcEEEee
Q psy15417 22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGS-------CKQTF----PGHESDINAVTFFPNGWAFATGSDDATCRLFD 90 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~-------~~~~~----~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd 90 (176)
.|.+++|||||++|++|+.||+|++||+.+++ .+.++ .+|...|.+++|+|++ +++++.|+++++||
T Consensus 131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd 208 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMT 208 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEEC
T ss_pred cEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEE
Confidence 59999999999999999999999999999875 25666 6788899999999999 88999999999999
Q ss_pred CCCCCee---eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEE--eCCCCEEEE
Q psy15417 91 IRADQEL---AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGV--TEDGMAVAT 165 (176)
Q Consensus 91 ~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~t 165 (176)
+.+.... ..... .+...|.+++|+ +..+++++ +++|++||...++......+|...+..++| +|++..|++
T Consensus 209 ~~~~~~~~~~~tL~~-~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~ 284 (588)
T 2j04_A 209 VSASSHQPVSRMIQN-ASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLM 284 (588)
T ss_dssp CCSSSSCCCEEEEEC-CCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEE
T ss_pred CCCCccccceeeecc-cccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEE
Confidence 9776632 22211 222458889998 57888886 699999998877764544489999999999 999999999
Q ss_pred ccCCCcEEEeC
Q psy15417 166 GSWDSFLRIWN 176 (176)
Q Consensus 166 g~~d~~v~vwd 176 (176)
++.||+ |+|.
T Consensus 285 a~edG~-klw~ 294 (588)
T 2j04_A 285 SNKTSY-KVLL 294 (588)
T ss_dssp CSSCEE-EEEE
T ss_pred EcCCCC-EEEe
Confidence 999999 9983
No 120
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.92 E-value=6.3e-24 Score=158.39 Aligned_cols=156 Identities=17% Similarity=0.193 Sum_probs=117.3
Q ss_pred CccCeEEEEEcCC----CCEEEEEe--------------------CCCeEEEEEc-CCCeeeeEecCCCCCeeEEEEcc-
Q psy15417 19 HTGDVMSLSLAPD----MRTFVSGA--------------------CDASAKLWDI-RDGSCKQTFPGHESDINAVTFFP- 72 (176)
Q Consensus 19 h~~~V~~~~~~~~----~~~l~s~s--------------------~dg~v~~wd~-~~~~~~~~~~~h~~~v~~v~~~~- 72 (176)
|...|..++|+|+ ++.+++++ .|+.|++|++ ..++.+..+.+|...++.++|+|
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~ 189 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEV 189 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEE
T ss_pred cccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeecc
Confidence 4456777777777 66666655 3899999999 45888888888999999999999
Q ss_pred --CCcEEEEeeCCCcEEEeeCCCCCeeeEEe-ecceEeceEEEEECCCCcEE------------EEEcCCCeEEEEeCCC
Q psy15417 73 --NGWAFATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLL------------LAGYDDFNCNVWDSMK 137 (176)
Q Consensus 73 --~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l------------~~g~~d~~i~v~d~~~ 137 (176)
++..|++++.|++|++||+++++.+..+. +......+.+++|+|++.++ ++|+.|+++++||..+
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~t 269 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKT 269 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTT
T ss_pred CCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCC
Confidence 67999999999999999999998877664 22223467788999999876 5678899999999988
Q ss_pred ceeeeee-----cCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 138 TERAGIL-----AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 138 ~~~~~~~-----~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
++.+..+ .+|...+.+..++ +..+|+|+.|++|||||
T Consensus 270 gk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWD 311 (356)
T 2w18_A 270 TLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWD 311 (356)
T ss_dssp TEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEE
T ss_pred CEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEE
Confidence 8776654 3666665444444 77999999999999997
No 121
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.91 E-value=2.4e-22 Score=154.46 Aligned_cols=149 Identities=20% Similarity=0.350 Sum_probs=124.8
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec--CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeE
Q psy15417 22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP--GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAM 99 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~ 99 (176)
+.+.++|+++ .+|++|. |++|++||+.++++...+. +|...|++++|+|++++|++|+.|++|++||+++++.+..
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence 3567999975 4666665 9999999999998877665 5778899999999999999999999999999998876655
Q ss_pred EeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc-eeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 100 YSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT-ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 100 ~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
+. .+...+.++.+ ++..+++|+.|+.+++||.... .....+.+|...+..+.+.|++.++++++.|+.+++||
T Consensus 185 ~~--~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~ 258 (420)
T 4gga_A 185 MT--SHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP 258 (420)
T ss_dssp EC--CCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred Ee--CCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEe
Confidence 43 23345666666 5679999999999999997654 45667889999999999999999999999999999995
No 122
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=4.3e-23 Score=159.86 Aligned_cols=155 Identities=13% Similarity=0.081 Sum_probs=121.0
Q ss_pred CccCeEEEEEcCCCCEEE----EEeCCCeEEEEEcCCC--------e---eeeEecCCCCCeeEEEEccC-CcEEEEeeC
Q psy15417 19 HTGDVMSLSLAPDMRTFV----SGACDASAKLWDIRDG--------S---CKQTFPGHESDINAVTFFPN-GWAFATGSD 82 (176)
Q Consensus 19 h~~~V~~~~~~~~~~~l~----s~s~dg~v~~wd~~~~--------~---~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~ 82 (176)
|.+.|.+++|+|++++|+ +|+.|++|++||++++ + ....+.+|...|.+++|+|+ +..|++++.
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 566799999999999999 8999999999998754 1 24566779999999999998 889999999
Q ss_pred CCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC-------CccEEEEE
Q psy15417 83 DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH-------DNRVSCLG 155 (176)
Q Consensus 83 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~-------~~~i~~~~ 155 (176)
|++|++||+++...... ...+...+.+++|+|++.+|++|+.|+++++||.. ++....+..| ...+.+++
T Consensus 171 Dg~v~iwD~~~~~~~~~--~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~ 247 (434)
T 2oit_A 171 DGSIAVLQVTETVKVCA--TLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVL 247 (434)
T ss_dssp TSCEEEEEESSSEEEEE--EECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEE
T ss_pred CCeEEEEEcCCCcceee--ccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEE
Confidence 99999999987744322 22223468899999999999999999999999976 4444443333 33789999
Q ss_pred EeCCCCEEEE-ccCCC------cEEEeC
Q psy15417 156 VTEDGMAVAT-GSWDS------FLRIWN 176 (176)
Q Consensus 156 ~~~~~~~l~t-g~~d~------~v~vwd 176 (176)
|++++.++++ .+.|| .+++||
T Consensus 248 w~~~~~~l~~~~~~dg~~~~~~~v~i~~ 275 (434)
T 2oit_A 248 WIGTYVFAIVYAAADGTLETSPDVVMAL 275 (434)
T ss_dssp EEETTEEEEEEEETTCCSSSCCEEEEEE
T ss_pred EecCceEEEEEccCCCccCCCCceEEEE
Confidence 9998877743 33332 277774
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.90 E-value=1.4e-21 Score=148.05 Aligned_cols=154 Identities=16% Similarity=0.188 Sum_probs=127.8
Q ss_pred CCCccCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEE-EeeCCCcEEEeeCCCC
Q psy15417 17 SGHTGDVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA-TGSDDATCRLFDIRAD 94 (176)
Q Consensus 17 ~gh~~~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~d~~i~iwd~~~~ 94 (176)
.+| ..+.+++|+|+++++ ++++.|++|++||+.+++....+..+. .+.+++|+|+++.++ +++.++.|++||+.++
T Consensus 29 ~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~ 106 (391)
T 1l0q_A 29 PVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN 106 (391)
T ss_dssp ECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred ecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCC
Confidence 445 458999999999876 777799999999999999998888665 899999999998775 5556799999999887
Q ss_pred CeeeEEeecceEeceEEEEECCCCcEE-EEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCcE
Q psy15417 95 QELAMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSFL 172 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~v 172 (176)
+.+...... ..+..++|+|+++.+ +++..++.+++||+.+++....+..+ ..+..++|+|++..+ ++++.|+.|
T Consensus 107 ~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v 182 (391)
T 1l0q_A 107 TVAGTVKTG---KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSI 182 (391)
T ss_dssp EEEEEEECS---SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEE
T ss_pred eEEEEEeCC---CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEE
Confidence 766554433 246789999999866 78888999999999888887777655 456889999999877 688889999
Q ss_pred EEeC
Q psy15417 173 RIWN 176 (176)
Q Consensus 173 ~vwd 176 (176)
++||
T Consensus 183 ~~~d 186 (391)
T 1l0q_A 183 SVID 186 (391)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9996
No 124
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.89 E-value=2.1e-22 Score=152.61 Aligned_cols=122 Identities=10% Similarity=0.091 Sum_probs=104.9
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCC----eEEEEEcCCCee----eeEecCCCCCeeEEEEccCCcEEEEeeCCCcE
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDA----SAKLWDIRDGSC----KQTFPGHESDINAVTFFPNGWAFATGSDDATC 86 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg----~v~~wd~~~~~~----~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i 86 (176)
...+|...|.+++|+|++.++++++.|+ .+++|++..... ...+.+|..+|++++|+|++++|++|+.|++|
T Consensus 214 ~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V 293 (365)
T 4h5i_A 214 TDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSI 293 (365)
T ss_dssp CCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCE
T ss_pred ecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEE
Confidence 4567999999999999999999999887 578899877643 45678899999999999999999999999999
Q ss_pred EEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC
Q psy15417 87 RLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137 (176)
Q Consensus 87 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~ 137 (176)
++||+++.+.+..+. ..+...|++++|+||+++|++|+.|++|+||++..
T Consensus 294 ~iwd~~~~~~~~~~~-~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 294 ALVKLKDLSMSKIFK-QAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEETTTTEEEEEET-TSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred EEEECCCCcEEEEec-CcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 999999877665432 22345799999999999999999999999999854
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.89 E-value=2.8e-21 Score=148.23 Aligned_cols=157 Identities=11% Similarity=0.059 Sum_probs=132.7
Q ss_pred cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEE-EeeCCCcEEEeeCCCC
Q psy15417 16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA-TGSDDATCRLFDIRAD 94 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~d~~i~iwd~~~~ 94 (176)
+.+|.+.|.+++|++++.++++++.|+.|++||+++++....+..|...+.+++|+|++..++ +++.|+.|++||++++
T Consensus 165 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~ 244 (433)
T 3bws_A 165 YKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK 244 (433)
T ss_dssp HHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred ccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC
Confidence 458999999999999999999999999999999999999999999999999999999998775 5558999999999887
Q ss_pred CeeeEEeecceEeceEEEEECCCCcEEEEEc--------CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCE-EEE
Q psy15417 95 QELAMYSHDNIICGITSVAFSRSGRLLLAGY--------DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMA-VAT 165 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~--------~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~t 165 (176)
+.+...... ..+..++|+|++..+++++ .|+.+++||+.+++..... .|...+..++|+|++.. +++
T Consensus 245 ~~~~~~~~~---~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~ 320 (433)
T 3bws_A 245 LEIRKTDKI---GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVS 320 (433)
T ss_dssp EEEEECCCC---SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEE
T ss_pred cEEEEecCC---CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEE
Confidence 665544332 2477899999999888877 5889999998887766554 45567889999999965 567
Q ss_pred ccCCCcEEEeC
Q psy15417 166 GSWDSFLRIWN 176 (176)
Q Consensus 166 g~~d~~v~vwd 176 (176)
++.|+.|++||
T Consensus 321 ~~~~~~v~v~d 331 (433)
T 3bws_A 321 DMCCSKIEVYD 331 (433)
T ss_dssp ETTTTEEEEEE
T ss_pred ecCCCEEEEEE
Confidence 79999999996
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.88 E-value=1.7e-20 Score=142.09 Aligned_cols=153 Identities=13% Similarity=0.162 Sum_probs=128.2
Q ss_pred CccCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEE-EEeeCCCcEEEeeCCCCCe
Q psy15417 19 HTGDVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF-ATGSDDATCRLFDIRADQE 96 (176)
Q Consensus 19 h~~~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~d~~i~iwd~~~~~~ 96 (176)
+...+.+++|+|+++.+ ++++.++.|++||+++++....+..+. .+.+++|+|+++.+ ++++.++.|++||+++++.
T Consensus 114 ~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~ 192 (391)
T 1l0q_A 114 TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV 192 (391)
T ss_dssp CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE
Confidence 34568999999999977 788889999999999999888888664 57999999999876 6778899999999988766
Q ss_pred eeEEeecceEeceEEEEECCCCcEEEEEc---CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCcE
Q psy15417 97 LAMYSHDNIICGITSVAFSRSGRLLLAGY---DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSFL 172 (176)
Q Consensus 97 ~~~~~~~~~~~~v~~~~~~~~~~~l~~g~---~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~v 172 (176)
........ .+..++|+|++..+++++ .++.+++||+..++.+..+..+. .+.+++|+|++.+| ++++.|+.|
T Consensus 193 ~~~~~~~~---~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v 268 (391)
T 1l0q_A 193 IDTVKVEA---APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTV 268 (391)
T ss_dssp EEEEECSS---EEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEE
T ss_pred EEEEecCC---CccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEE
Confidence 65554432 467899999999888877 68999999998888888777664 46889999999877 687899999
Q ss_pred EEeC
Q psy15417 173 RIWN 176 (176)
Q Consensus 173 ~vwd 176 (176)
++||
T Consensus 269 ~v~d 272 (391)
T 1l0q_A 269 SVID 272 (391)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9996
No 127
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=2e-22 Score=156.09 Aligned_cols=156 Identities=9% Similarity=0.093 Sum_probs=124.1
Q ss_pred CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-----------ee-----eeEecCCCCCeeEEEEccCCcEEE----
Q psy15417 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG-----------SC-----KQTFPGHESDINAVTFFPNGWAFA---- 78 (176)
Q Consensus 19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~-----------~~-----~~~~~~h~~~v~~v~~~~~~~~l~---- 78 (176)
....++.+++++++.++++++.++ +++|+.... .. ...+ .+...|++++|+|++++|+
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~lav~~~ 112 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCDNLTLSACMM 112 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTTSCEEEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCCCCEEEEEEe
Confidence 345688999999999999999888 888875311 10 0112 2567899999999999999
Q ss_pred EeeCCCcEEEeeCCCC--------CeeeEEe-ecceEeceEEEEECCC-CcEEEEEcCCCeEEEEeCCCceeeeeecCCC
Q psy15417 79 TGSDDATCRLFDIRAD--------QELAMYS-HDNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDSMKTERAGILAGHD 148 (176)
Q Consensus 79 s~s~d~~i~iwd~~~~--------~~~~~~~-~~~~~~~v~~~~~~~~-~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~ 148 (176)
+++.|+.|++||+++. +.+.... ...+...|.+++|+|+ +.++++++.|+++++||+.++.......+|.
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~ 192 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPST 192 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGG
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCC
Confidence 8899999999998653 1111221 2223357899999998 7899999999999999998887666667788
Q ss_pred ccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 149 NRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 149 ~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
..+.+++|+|+|.+|++|+.|++|++||
T Consensus 193 ~~v~~v~wspdg~~lasgs~dg~v~iwd 220 (434)
T 2oit_A 193 VAVTSVCWSPKGKQLAVGKQNGTVVQYL 220 (434)
T ss_dssp GCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CceeEEEEcCCCCEEEEEcCCCcEEEEc
Confidence 8999999999999999999999999997
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.87 E-value=7.8e-21 Score=145.78 Aligned_cols=153 Identities=11% Similarity=0.063 Sum_probs=128.0
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeee-----EecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417 21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ-----TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~-----~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 95 (176)
..+.+++|+|++.++++++.++.|++||+.+++... .+.+|...|.+++|.|++..+++++.|+.|++||+++.+
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA 202 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce
Confidence 345689999988888999999999999999998776 455788999999999999999999999999999998877
Q ss_pred eeeEEeecceEeceEEEEECCCCcEE-EEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEcc-------
Q psy15417 96 ELAMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGS------- 167 (176)
Q Consensus 96 ~~~~~~~~~~~~~v~~~~~~~~~~~l-~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~------- 167 (176)
.+..+.. +...+.+++|+|++..+ +++..++.+++||+.+++....+..+ ..+.+++|+|++..+++++
T Consensus 203 ~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~ 279 (433)
T 3bws_A 203 YKATVDL--TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQE 279 (433)
T ss_dssp EEEEEEC--SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTC
T ss_pred EEEEEcC--CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccc
Confidence 6655442 22357889999999877 56668999999999888877776654 4588999999999998887
Q ss_pred -CCCcEEEeC
Q psy15417 168 -WDSFLRIWN 176 (176)
Q Consensus 168 -~d~~v~vwd 176 (176)
.|+.|++||
T Consensus 280 ~~dg~i~~~d 289 (433)
T 3bws_A 280 SGGGRLGIYS 289 (433)
T ss_dssp SCCEEEEEEE
T ss_pred cCCCeEEEEE
Confidence 588999996
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.86 E-value=8e-20 Score=140.63 Aligned_cols=157 Identities=13% Similarity=0.091 Sum_probs=123.8
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCC---eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEE-EeeCCCc--EEE
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDA---SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA-TGSDDAT--CRL 88 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg---~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~d~~--i~i 88 (176)
.+.+|.+.|.+++|+|+++.|++++.++ .|++||+++++.. .+..|...+.+++|+|+++.|+ +++.++. |.+
T Consensus 173 ~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~ 251 (415)
T 2hqs_A 173 VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYV 251 (415)
T ss_dssp EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred EEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEE
Confidence 4567999999999999999999999885 8999999998765 5677888999999999999777 7776665 899
Q ss_pred eeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcC-CC--eEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEE
Q psy15417 89 FDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYD-DF--NCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVAT 165 (176)
Q Consensus 89 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~-d~--~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~t 165 (176)
||+.+++......+. ..+..+.|+|+++.++.++. ++ .+.+||+..++. ..+..+...+..++|+|+|.+|+.
T Consensus 252 ~d~~~~~~~~l~~~~---~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~ 327 (415)
T 2hqs_A 252 MDLASGQIRQVTDGR---SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVM 327 (415)
T ss_dssp EETTTCCEEECCCCS---SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEE
T ss_pred EECCCCCEEeCcCCC---CcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEE
Confidence 999876543322222 35778999999998877765 44 677789776653 334456677889999999999988
Q ss_pred ccCC---CcEEEeC
Q psy15417 166 GSWD---SFLRIWN 176 (176)
Q Consensus 166 g~~d---~~v~vwd 176 (176)
++.+ ..|++||
T Consensus 328 ~~~~~g~~~i~~~d 341 (415)
T 2hqs_A 328 VSSNGGQQHIAKQD 341 (415)
T ss_dssp EEECSSCEEEEEEE
T ss_pred EECcCCceEEEEEE
Confidence 8764 5788885
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.82 E-value=1.8e-18 Score=133.03 Aligned_cols=155 Identities=14% Similarity=0.132 Sum_probs=119.6
Q ss_pred cCCCccCeEEEEEcCCCCEEE-EEeCCCe--EEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeC-CC--cEEEe
Q psy15417 16 ASGHTGDVMSLSLAPDMRTFV-SGACDAS--AKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD-DA--TCRLF 89 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~~~~l~-s~s~dg~--v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~--~i~iw 89 (176)
+.+|.+.+.+++|+||++.|+ +++.++. |++||+++++. ..+..|...+.+++|+|+++.|+.++. ++ .|.+|
T Consensus 218 l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~ 296 (415)
T 2hqs_A 218 VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKV 296 (415)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEE
Confidence 556888999999999999777 7776655 89999998875 567778889999999999998888776 45 56777
Q ss_pred eCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCC---CeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEc
Q psy15417 90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD---FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATG 166 (176)
Q Consensus 90 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d---~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg 166 (176)
|+.+++........ ..+..+.|+|++++++.++.+ ..|++||+.+++.. .+..+. .+..++|+|+|.+|+.+
T Consensus 297 d~~~~~~~~l~~~~---~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~ 371 (415)
T 2hqs_A 297 NINGGAPQRITWEG---SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYS 371 (415)
T ss_dssp ETTSSCCEECCCSS---SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEE
T ss_pred ECCCCCEEEEecCC---CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEE
Confidence 88766533221111 246678999999988877654 58999998877653 344444 78899999999999988
Q ss_pred cCCC---cEEEeC
Q psy15417 167 SWDS---FLRIWN 176 (176)
Q Consensus 167 ~~d~---~v~vwd 176 (176)
+.++ .+++||
T Consensus 372 s~~~~~~~l~~~d 384 (415)
T 2hqs_A 372 SSQGMGSVLNLVS 384 (415)
T ss_dssp EEETTEEEEEEEE
T ss_pred EcCCCccEEEEEE
Confidence 8777 688775
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.79 E-value=7.2e-18 Score=122.12 Aligned_cols=156 Identities=12% Similarity=0.127 Sum_probs=118.5
Q ss_pred cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-CeeeeEecCC-CCCeeEEEEccCCcEEEEee--CCCcEEEeeC
Q psy15417 16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD-GSCKQTFPGH-ESDINAVTFFPNGWAFATGS--DDATCRLFDI 91 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~-~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~s--~d~~i~iwd~ 91 (176)
+..|.+.|.+++|+|++++|++++ ++.|.+||+.+ ++....+..+ ...+.+++|+|+++.++.++ .++..++|.+
T Consensus 37 ~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~ 115 (297)
T 2ojh_A 37 VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLL 115 (297)
T ss_dssp EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEE
T ss_pred eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEE
Confidence 456888999999999999999987 88999999999 8777666666 36789999999999999998 3456666654
Q ss_pred --CCCCeeeEEeecceEeceEEEEECCCCcEEE-EEcCCCeEEEEeCCC-ceeeeeecCCCccEEEEEEeCCCCEEEEcc
Q psy15417 92 --RADQELAMYSHDNIICGITSVAFSRSGRLLL-AGYDDFNCNVWDSMK-TERAGILAGHDNRVSCLGVTEDGMAVATGS 167 (176)
Q Consensus 92 --~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~g~~d~~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~ 167 (176)
.+.+. ...... ..+..+.|+|+++.++ ++..++.+++|++.. ......+..+...+.+++|+|++..|+.++
T Consensus 116 ~~~~~~~-~~~~~~---~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 116 PSTGGTP-RLMTKN---LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp ETTCCCC-EECCSS---SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEE
T ss_pred ECCCCce-EEeecC---CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEe
Confidence 43332 222222 1367789999998776 788889999998532 233445566778899999999999887665
Q ss_pred -CCCcEEEeC
Q psy15417 168 -WDSFLRIWN 176 (176)
Q Consensus 168 -~d~~v~vwd 176 (176)
.++.+++|+
T Consensus 192 ~~~~~~~i~~ 201 (297)
T 2ojh_A 192 SRTGQMQIWR 201 (297)
T ss_dssp CTTSSCEEEE
T ss_pred cCCCCccEEE
Confidence 588899884
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.78 E-value=2.3e-17 Score=122.26 Aligned_cols=158 Identities=12% Similarity=0.118 Sum_probs=113.4
Q ss_pred CCccCeEEEEEcCCCCEEEEEeCC-CeEEEEEcC--CCe--eeeEecCCCCCeeEEEEccCCcEEEEeeC-CCcEEEeeC
Q psy15417 18 GHTGDVMSLSLAPDMRTFVSGACD-ASAKLWDIR--DGS--CKQTFPGHESDINAVTFFPNGWAFATGSD-DATCRLFDI 91 (176)
Q Consensus 18 gh~~~V~~~~~~~~~~~l~s~s~d-g~v~~wd~~--~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~~i~iwd~ 91 (176)
.|...+.+++|+|++++|++++.+ +.|.+|++. +++ .+..+..+. .+..++|+|+++.+++++. ++.|.+||+
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 466778899999999988888887 899999997 554 344555444 7899999999997766665 788999999
Q ss_pred CCCCeeeEEeecceEeceEEEEECCCCcEEEEEc-CCCeEEEEeCCC-ceeee----eecC-CCccEEEEEEeCCCCEEE
Q psy15417 92 RADQELAMYSHDNIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMK-TERAG----ILAG-HDNRVSCLGVTEDGMAVA 164 (176)
Q Consensus 92 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~-~d~~i~v~d~~~-~~~~~----~~~~-~~~~i~~~~~~~~~~~l~ 164 (176)
..+..............+..++|+|+++.++++. .++.+++||+.. ++... .... ....+..++|+|++.+++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~ 193 (343)
T 1ri6_A 114 EDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAY 193 (343)
T ss_dssp ETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEE
T ss_pred CCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEE
Confidence 5322211111111112466789999998776665 889999999876 43321 2222 334678899999998764
Q ss_pred -EccCCCcEEEeC
Q psy15417 165 -TGSWDSFLRIWN 176 (176)
Q Consensus 165 -tg~~d~~v~vwd 176 (176)
++..++.+++||
T Consensus 194 ~~~~~~~~i~~~~ 206 (343)
T 1ri6_A 194 CVNELNSSVDVWE 206 (343)
T ss_dssp EEETTTTEEEEEE
T ss_pred EEeCCCCEEEEEE
Confidence 555889999995
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.77 E-value=1.9e-17 Score=135.07 Aligned_cols=146 Identities=16% Similarity=0.097 Sum_probs=114.1
Q ss_pred ccCeEEEEEcCCCCEEEEEeC-CC-----eEEEEEcCCCeeeeEecCCCC------------------------CeeEEE
Q psy15417 20 TGDVMSLSLAPDMRTFVSGAC-DA-----SAKLWDIRDGSCKQTFPGHES------------------------DINAVT 69 (176)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~s~-dg-----~v~~wd~~~~~~~~~~~~h~~------------------------~v~~v~ 69 (176)
...|..++|+|||++|++++. |+ .|++||+.+++....+..+.. .+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456899999999999999998 88 899999999987776654432 378999
Q ss_pred EccCCcEEEEeeCCCcEEEeeCCCC---CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC
Q psy15417 70 FFPNGWAFATGSDDATCRLFDIRAD---QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG 146 (176)
Q Consensus 70 ~~~~~~~l~s~s~d~~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~ 146 (176)
|+|+|+.|+.++. +.|.+||+.++ +........ ..+..+.|+|||+.++.+. ++.|++||+..++.......
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~---~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~ 190 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGE---GFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTAD 190 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSS---SCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCC
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCC---cccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccC
Confidence 9999999999887 89999999876 433222221 3477899999999988876 45899999887766554443
Q ss_pred CCcc----------------EEEEEEeCCCCEEEEccCCC
Q psy15417 147 HDNR----------------VSCLGVTEDGMAVATGSWDS 170 (176)
Q Consensus 147 ~~~~----------------i~~~~~~~~~~~l~tg~~d~ 170 (176)
+... +..++|+|+|..|+.++.|+
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred CccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 3332 36789999999999887765
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.76 E-value=1.5e-16 Score=126.31 Aligned_cols=152 Identities=8% Similarity=-0.009 Sum_probs=120.9
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEEc--CCCeeeeEecCCCCCeeEEEEcc----CCcEEEEee-CCCcEEEeeCCCCC
Q psy15417 23 VMSLSLAPDMRTFVSGACDASAKLWDI--RDGSCKQTFPGHESDINAVTFFP----NGWAFATGS-DDATCRLFDIRADQ 95 (176)
Q Consensus 23 V~~~~~~~~~~~l~s~s~dg~v~~wd~--~~~~~~~~~~~h~~~v~~v~~~~----~~~~l~s~s-~d~~i~iwd~~~~~ 95 (176)
+..++|+|++++|++++.|++|.+||+ .+++++.+++. ...+.+++|+| +++++++++ .+++|.+||..+.+
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence 889999999999999999999999999 88988888884 45689999999 999998888 48999999998887
Q ss_pred eeeEEeecc---------eEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCceeee--eecCCCccEEEEEEeCCCCEE
Q psy15417 96 ELAMYSHDN---------IICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKTERAG--ILAGHDNRVSCLGVTEDGMAV 163 (176)
Q Consensus 96 ~~~~~~~~~---------~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l 163 (176)
.+....... ....+..+.++|++. ++++...+++|.+||....+.+. .+ .+...+..++|+|++.++
T Consensus 260 ~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l 338 (543)
T 1nir_A 260 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYF 338 (543)
T ss_dssp EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEE
T ss_pred cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEE
Confidence 766554311 112577899999765 56777889999999987654332 33 345567788999999976
Q ss_pred E-EccCCCcEEEeC
Q psy15417 164 A-TGSWDSFLRIWN 176 (176)
Q Consensus 164 ~-tg~~d~~v~vwd 176 (176)
+ ++..+++|++||
T Consensus 339 ~va~~~~~~v~v~D 352 (543)
T 1nir_A 339 MTAANNSNKVAVID 352 (543)
T ss_dssp EEEEGGGTEEEEEE
T ss_pred EEEecCCCeEEEEE
Confidence 5 455688999996
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.75 E-value=2.2e-18 Score=140.13 Aligned_cols=147 Identities=9% Similarity=0.076 Sum_probs=112.2
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCC---CeeEEEEccCCcEEEEeeCC---------CcEEEe
Q psy15417 22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHES---DINAVTFFPNGWAFATGSDD---------ATCRLF 89 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~---~v~~v~~~~~~~~l~s~s~d---------~~i~iw 89 (176)
.+.+++|+|||+++++ +.||+|++||+.+++....+..|.. .|.+++|+|+|+++++++.+ +.+.+|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 4678899999997766 7899999999999988888877764 49999999999999999875 678899
Q ss_pred eCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCcc------------------E
Q psy15417 90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNR------------------V 151 (176)
Q Consensus 90 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~------------------i 151 (176)
|+.+++.........+...+..++|+|||+.++.++. +.+++||+..++.......+... +
T Consensus 97 d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~ 175 (723)
T 1xfd_A 97 KIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTH 175 (723)
T ss_dssp ESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSS
T ss_pred ECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCc
Confidence 9987764222111221123567899999998888775 78999998877665544433322 2
Q ss_pred EEEEEeCCCCEEEEccCCC
Q psy15417 152 SCLGVTEDGMAVATGSWDS 170 (176)
Q Consensus 152 ~~~~~~~~~~~l~tg~~d~ 170 (176)
..++|+|+|+.|+.++.|+
T Consensus 176 ~~~~~SpDg~~la~~~~~~ 194 (723)
T 1xfd_A 176 IAHWWSPDGTRLAYAAIND 194 (723)
T ss_dssp EEEEECTTSSEEEEEEEEC
T ss_pred ceEEECCCCCEEEEEEECC
Confidence 6899999999999887553
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.75 E-value=3.3e-16 Score=116.01 Aligned_cols=154 Identities=12% Similarity=0.052 Sum_probs=113.3
Q ss_pred CccCeEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCee-eeEecCCCCCeeEEEEccCCcEEEEeeCCC---cEEEeeCCC
Q psy15417 19 HTGDVMSLSLAPDMRTFVSGAC-DASAKLWDIRDGSC-KQTFPGHESDINAVTFFPNGWAFATGSDDA---TCRLFDIRA 93 (176)
Q Consensus 19 h~~~V~~~~~~~~~~~l~s~s~-dg~v~~wd~~~~~~-~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~---~i~iwd~~~ 93 (176)
+...+ .++|+|+++++++++. ++.|.+||..+++. ...+..+..+..+++|+|++++++++..++ .|.+||+.+
T Consensus 39 ~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~ 117 (331)
T 3u4y_A 39 GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLK 117 (331)
T ss_dssp CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTT
T ss_pred cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCC
Confidence 34555 9999999996666655 88999999999987 777776766666699999999988655553 899999988
Q ss_pred CCeeeEEeecceEeceEEEEECCCCc-EEEEEcCCCe-EEEEeCCCceee----eeecCCCccEEEEEEeCCCCEE-EEc
Q psy15417 94 DQELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFN-CNVWDSMKTERA----GILAGHDNRVSCLGVTEDGMAV-ATG 166 (176)
Q Consensus 94 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~-i~v~d~~~~~~~----~~~~~~~~~i~~~~~~~~~~~l-~tg 166 (176)
++.+....... ....++|+|+++ ++++...++. +.+|++.....+ ............++|+|++.++ +++
T Consensus 118 ~~~~~~~~~~~---~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 194 (331)
T 3u4y_A 118 NKFISTIPIPY---DAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVAN 194 (331)
T ss_dssp TEEEEEEECCT---TEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEE
T ss_pred CCeEEEEECCC---CccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEe
Confidence 77655544322 356899999997 4455566677 999997643221 1222334457889999999855 556
Q ss_pred cCCCcEEEeC
Q psy15417 167 SWDSFLRIWN 176 (176)
Q Consensus 167 ~~d~~v~vwd 176 (176)
..++.|++||
T Consensus 195 ~~~~~v~v~d 204 (331)
T 3u4y_A 195 LIGNSIGILE 204 (331)
T ss_dssp TTTTEEEEEE
T ss_pred CCCCeEEEEE
Confidence 6788999996
No 137
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.74 E-value=1e-16 Score=118.44 Aligned_cols=149 Identities=15% Similarity=0.107 Sum_probs=115.9
Q ss_pred CeEEEEEcCCCCEEEEEe------------CCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEe
Q psy15417 22 DVMSLSLAPDMRTFVSGA------------CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF 89 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s~s------------~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw 89 (176)
.+..++|+|+++.+++++ .++.|.+||+.+++....+.. ...+.+++|+|+++.++.+ ++.+.+|
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~ 159 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVM 159 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEE
Confidence 567899999999888886 579999999999988877765 4567889999999988777 6889999
Q ss_pred eCCCCCeeeEEeecc----------------------------------------------------------------e
Q psy15417 90 DIRADQELAMYSHDN----------------------------------------------------------------I 105 (176)
Q Consensus 90 d~~~~~~~~~~~~~~----------------------------------------------------------------~ 105 (176)
|+.+++......... .
T Consensus 160 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 239 (337)
T 1pby_B 160 DPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM 239 (337)
T ss_dssp ETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEEC
T ss_pred ECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCC
Confidence 987654432221100 0
Q ss_pred EeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 106 ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 106 ~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
...+..+.|+|+++.++++ ++.+++||+.+++....+..+ ..+.+++|+|++++|++++.++.|++||
T Consensus 240 ~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d 307 (337)
T 1pby_B 240 DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYD 307 (337)
T ss_dssp SSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEE
T ss_pred CCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEE
Confidence 0123468999999988887 789999999888777666533 4567899999999988888899999996
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.74 E-value=2.1e-16 Score=125.53 Aligned_cols=145 Identities=15% Similarity=0.081 Sum_probs=119.3
Q ss_pred EcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeC--CCCCeeeEEeecce
Q psy15417 28 LAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI--RADQELAMYSHDNI 105 (176)
Q Consensus 28 ~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~--~~~~~~~~~~~~~~ 105 (176)
|+|++..+++++.|++|.+||..+++++.++..+.. +..++|+|+++++++++.|++|++||+ .+.+.+......
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g-- 221 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG-- 221 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC--
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecC--
Confidence 788999999999999999999999999999984433 889999999999999999999999999 666555444432
Q ss_pred EeceEEEEECC----CCcEEEEEc-CCCeEEEEeCCCceeeeeecC----------C-CccEEEEEEeCCCC-EEEEccC
Q psy15417 106 ICGITSVAFSR----SGRLLLAGY-DDFNCNVWDSMKTERAGILAG----------H-DNRVSCLGVTEDGM-AVATGSW 168 (176)
Q Consensus 106 ~~~v~~~~~~~----~~~~l~~g~-~d~~i~v~d~~~~~~~~~~~~----------~-~~~i~~~~~~~~~~-~l~tg~~ 168 (176)
..+..++|+| +++++++++ .++++.+||..+.+++..+.. | ...+..+.++|++. ++++...
T Consensus 222 -~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 222 -IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp -SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred -CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 2356799999 999888877 589999999988888777654 2 23688899999754 5678888
Q ss_pred CCcEEEeC
Q psy15417 169 DSFLRIWN 176 (176)
Q Consensus 169 d~~v~vwd 176 (176)
++.|.+||
T Consensus 301 ~g~i~vvd 308 (543)
T 1nir_A 301 TGKVLLVN 308 (543)
T ss_dssp TTEEEEEE
T ss_pred CCeEEEEE
Confidence 99999986
No 139
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.73 E-value=8.3e-16 Score=114.48 Aligned_cols=152 Identities=9% Similarity=-0.035 Sum_probs=119.6
Q ss_pred eEEEEEcCCCCEEEEEe--CCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE
Q psy15417 23 VMSLSLAPDMRTFVSGA--CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY 100 (176)
Q Consensus 23 V~~~~~~~~~~~l~s~s--~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 100 (176)
+.++.|+|+++.+++++ .++.|.+||.++++....+..+...+.+++|+|+++.++.++.++.+.+||+.+++.....
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~ 222 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRK 222 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEE
Confidence 68899999999777766 4788999999999988888866666889999999999999999999999999887766554
Q ss_pred eec--ceEeceEEEEECCCCcEEEEEc-CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCcEEEeC
Q psy15417 101 SHD--NIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSFLRIWN 176 (176)
Q Consensus 101 ~~~--~~~~~v~~~~~~~~~~~l~~g~-~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~v~vwd 176 (176)
... .....+..++|+|++..++++. .++.+.+||..+++....+..... ..++|+|++..+ ++...++.|.+||
T Consensus 223 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~~~v~~~d 300 (353)
T 3vgz_A 223 KLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LAVLFNPARNEAYVTHRQAGKVSVID 300 (353)
T ss_dssp ECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CCEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ceEEECCCCCEEEEEECCCCeEEEEE
Confidence 431 1123456789999998665554 558999999988877766654332 468899999855 4555789999996
No 140
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.72 E-value=2.7e-15 Score=112.06 Aligned_cols=155 Identities=11% Similarity=0.097 Sum_probs=109.9
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCeEEEEEcC-CCeee--eEecCC-CCCeeEEEEccCCcEEEE-eeCCCcEEEeeCCC--
Q psy15417 21 GDVMSLSLAPDMRTFVSGACDASAKLWDIR-DGSCK--QTFPGH-ESDINAVTFFPNGWAFAT-GSDDATCRLFDIRA-- 93 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~-~~~~~--~~~~~h-~~~v~~v~~~~~~~~l~s-~s~d~~i~iwd~~~-- 93 (176)
..+.+++|+|+++++++...++.|.+|++. +++.. ..+..+ ...+..++|+|++++++. ...++.+.+|++..
T Consensus 141 ~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~ 220 (347)
T 3hfq_A 141 SHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT 220 (347)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTT
T ss_pred CCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCC
Confidence 458899999999977777778899999998 55432 222333 336788999999985555 56678999999864
Q ss_pred CCeeeEEeecceE------eceEEEEECCCCcEE-EEEcCCCeEEEEeCCC---ceeeeeecCCCccEEEEEEeCCCCEE
Q psy15417 94 DQELAMYSHDNII------CGITSVAFSRSGRLL-LAGYDDFNCNVWDSMK---TERAGILAGHDNRVSCLGVTEDGMAV 163 (176)
Q Consensus 94 ~~~~~~~~~~~~~------~~v~~~~~~~~~~~l-~~g~~d~~i~v~d~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l 163 (176)
++........... ..+..++|+|+++++ ++...++.+.+|++.. .+.+..+..+...+..++|+|++.+|
T Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l 300 (347)
T 3hfq_A 221 GAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFV 300 (347)
T ss_dssp TEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEE
T ss_pred CceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEE
Confidence 3221111111100 236779999999876 5566789999999862 24555566666667889999999988
Q ss_pred EEccC-CCcEEEe
Q psy15417 164 ATGSW-DSFLRIW 175 (176)
Q Consensus 164 ~tg~~-d~~v~vw 175 (176)
++++. ++.+.+|
T Consensus 301 ~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 301 VVVNQNTDNATLY 313 (347)
T ss_dssp EEEETTTTEEEEE
T ss_pred EEEEcCCCcEEEE
Confidence 77765 4889998
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.72 E-value=9.3e-16 Score=114.23 Aligned_cols=153 Identities=7% Similarity=0.002 Sum_probs=118.3
Q ss_pred CeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCeeeeEecCCCCC---------eeEEEEccCCcEEEEee--CCCcEEEe
Q psy15417 22 DVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTFPGHESD---------INAVTFFPNGWAFATGS--DDATCRLF 89 (176)
Q Consensus 22 ~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~~~h~~~---------v~~v~~~~~~~~l~s~s--~d~~i~iw 89 (176)
.+..+.|+|+++.+ ++...++.|.+||.++++....+..+... +.+++|+|+++.++.++ .++.|.+|
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~ 169 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVV 169 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEE
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEE
Confidence 45678999999855 55555799999999999988887765422 68899999998777665 47889999
Q ss_pred eCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC----CCccEEEEEEeCCCCEEEE
Q psy15417 90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG----HDNRVSCLGVTEDGMAVAT 165 (176)
Q Consensus 90 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~t 165 (176)
|+.+.+......... ..+..+.|+|++..++++..++.+.+||..+++....+.. +...+..++|+|++.+++.
T Consensus 170 d~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 247 (353)
T 3vgz_A 170 DGGNIKLKTAIQNTG--KMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFI 247 (353)
T ss_dssp ETTTTEEEEEECCCC--TTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEE
T ss_pred cCCCCceEEEecCCC--CccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEE
Confidence 998876665544111 2355788999999999999999999999988887766543 4556788999999987655
Q ss_pred cc-CCCcEEEeC
Q psy15417 166 GS-WDSFLRIWN 176 (176)
Q Consensus 166 g~-~d~~v~vwd 176 (176)
++ .++.|.+||
T Consensus 248 ~~~~~~~v~~~d 259 (353)
T 3vgz_A 248 TDSKAAEVLVVD 259 (353)
T ss_dssp EESSSSEEEEEE
T ss_pred EeCCCCEEEEEE
Confidence 54 458999986
No 142
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.72 E-value=6.1e-17 Score=131.64 Aligned_cols=153 Identities=11% Similarity=0.007 Sum_probs=113.6
Q ss_pred CeEEEEEcCCCCEEEEEeCC---------CeEEEEEcCCCeeeeEec---CCCCCeeEEEEccCCcEEEEeeCCCcEEEe
Q psy15417 22 DVMSLSLAPDMRTFVSGACD---------ASAKLWDIRDGSCKQTFP---GHESDINAVTFFPNGWAFATGSDDATCRLF 89 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s~s~d---------g~v~~wd~~~~~~~~~~~---~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw 89 (176)
.|.+++|||||++|++++.+ +.+.+||+.+++. ..+. +|...+..++|+|+|+.++.++. +.|.+|
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~ 139 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYC 139 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEE
Confidence 48999999999999999875 6788999998875 3333 34555889999999999999886 799999
Q ss_pred eCCCCCeeeEEeecce-E---------------eceEEEEECCCCcEEEEEcCCC-------------------------
Q psy15417 90 DIRADQELAMYSHDNI-I---------------CGITSVAFSRSGRLLLAGYDDF------------------------- 128 (176)
Q Consensus 90 d~~~~~~~~~~~~~~~-~---------------~~v~~~~~~~~~~~l~~g~~d~------------------------- 128 (176)
|+.+++.......... . ..+..+.|+||++.|+.+..++
T Consensus 140 ~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (723)
T 1xfd_A 140 AHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYP 219 (723)
T ss_dssp SSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECC
T ss_pred ECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCC
Confidence 9987665443321110 0 0226799999999888876442
Q ss_pred ---------eEEEEeCCCceeeeeecCC------CccEEEEEEeCCCCEEEEccC----CCcEEEeC
Q psy15417 129 ---------NCNVWDSMKTERAGILAGH------DNRVSCLGVTEDGMAVATGSW----DSFLRIWN 176 (176)
Q Consensus 129 ---------~i~v~d~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l~tg~~----d~~v~vwd 176 (176)
.+++||+..++....+..+ ...+..++|+|+|..|++.+. +..|++||
T Consensus 220 ~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d 286 (723)
T 1xfd_A 220 KAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCD 286 (723)
T ss_dssp BTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEE
T ss_pred CCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEe
Confidence 7999998877654444443 567889999999998876543 35677775
No 143
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.72 E-value=1.2e-15 Score=112.93 Aligned_cols=155 Identities=12% Similarity=0.153 Sum_probs=109.8
Q ss_pred cCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCC-Ceeee----EecC-CCCCeeEEEEccCCcEEEEe-eCCCcEEEeeCC
Q psy15417 21 GDVMSLSLAPDMRTFVSGA-CDASAKLWDIRD-GSCKQ----TFPG-HESDINAVTFFPNGWAFATG-SDDATCRLFDIR 92 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s-~dg~v~~wd~~~-~~~~~----~~~~-h~~~v~~v~~~~~~~~l~s~-s~d~~i~iwd~~ 92 (176)
..+.+++|+|+++.+++++ .++.|.+||+.+ ++... .+.. ....+.+++|+|+++.++.+ ..++.+.+|++.
T Consensus 129 ~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~ 208 (343)
T 1ri6_A 129 DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK 208 (343)
T ss_dssp TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 3578899999999888777 899999999987 64432 2333 23578899999999866555 478999999985
Q ss_pred C--CCee--eEEe-ecc---eEeceEEEEECCCCcEEE-EEcCCCeEEEEeCC----CceeeeeecCCCccEEEEEEeCC
Q psy15417 93 A--DQEL--AMYS-HDN---IICGITSVAFSRSGRLLL-AGYDDFNCNVWDSM----KTERAGILAGHDNRVSCLGVTED 159 (176)
Q Consensus 93 ~--~~~~--~~~~-~~~---~~~~v~~~~~~~~~~~l~-~g~~d~~i~v~d~~----~~~~~~~~~~~~~~i~~~~~~~~ 159 (176)
. +... .... ... ....+..++|+|+++.++ ++..++.+++||+. +.+.+..+..+.. +..++|+|+
T Consensus 209 ~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~d 287 (343)
T 1ri6_A 209 DPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHS 287 (343)
T ss_dssp CTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTT
T ss_pred CCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCC
Confidence 3 2221 1111 110 012355799999998766 55688999999987 2344444544444 778999999
Q ss_pred CCEEEEcc-CCCcEEEeC
Q psy15417 160 GMAVATGS-WDSFLRIWN 176 (176)
Q Consensus 160 ~~~l~tg~-~d~~v~vwd 176 (176)
+.+|++++ .++.+++|+
T Consensus 288 g~~l~~~~~~~~~v~v~~ 305 (343)
T 1ri6_A 288 GKYLIAAGQKSHHISVYE 305 (343)
T ss_dssp SSEEEEECTTTCEEEEEE
T ss_pred CCEEEEecCCCCeEEEEE
Confidence 99877766 689999993
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.72 E-value=1.5e-16 Score=129.80 Aligned_cols=159 Identities=11% Similarity=0.037 Sum_probs=120.6
Q ss_pred ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCC----------------eeEEEEccCCcEEE
Q psy15417 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD----------------INAVTFFPNGWAFA 78 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~----------------v~~v~~~~~~~~l~ 78 (176)
.+.+|...+..++|+|||+.++.++ ++.|.+||+.+++.......+... +.++.|+|+|+.|+
T Consensus 146 ~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~ 224 (741)
T 2ecf_A 146 QLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIA 224 (741)
T ss_dssp BCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEE
T ss_pred EcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEE
Confidence 4667888899999999999999887 568999999998766555444332 47899999999999
Q ss_pred EeeCCC---------------------------------cEEEeeCCC-CCeeeEEeecceEeceEEEEECCCCcEEEEE
Q psy15417 79 TGSDDA---------------------------------TCRLFDIRA-DQELAMYSHDNIICGITSVAFSRSGRLLLAG 124 (176)
Q Consensus 79 s~s~d~---------------------------------~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g 124 (176)
.++.|+ .|.+||+.+ ++.........+...+..+.| ||++.++.+
T Consensus 225 ~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~ 303 (741)
T 2ecf_A 225 YARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQ 303 (741)
T ss_dssp EEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEE
T ss_pred EEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEE
Confidence 887765 788899877 654433211112245778999 999988765
Q ss_pred cC-----CCeEEEEeCCCceeeeeecCCCc----cEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417 125 YD-----DFNCNVWDSMKTERAGILAGHDN----RVSCLGVTEDGMAVATGSWDSFLRIW 175 (176)
Q Consensus 125 ~~-----d~~i~v~d~~~~~~~~~~~~~~~----~i~~~~~~~~~~~l~tg~~d~~v~vw 175 (176)
.. +..+++||..+++.......+.. .+..++|+|+|.++++++.|+.++||
T Consensus 304 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~ 363 (741)
T 2ecf_A 304 RQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLY 363 (741)
T ss_dssp EEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEE
T ss_pred EecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEE
Confidence 43 56799999988876665554433 34578999999999999999988887
No 145
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.72 E-value=2.5e-16 Score=113.93 Aligned_cols=152 Identities=12% Similarity=0.112 Sum_probs=110.4
Q ss_pred ccCeEEEEEcCCCCEEEEEeC--CCeEEEEE--cCCCeeeeEecCCCCCeeEEEEccCCcEEE-EeeCCCcEEEeeCC--
Q psy15417 20 TGDVMSLSLAPDMRTFVSGAC--DASAKLWD--IRDGSCKQTFPGHESDINAVTFFPNGWAFA-TGSDDATCRLFDIR-- 92 (176)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~s~--dg~v~~wd--~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~d~~i~iwd~~-- 92 (176)
...|.+++|+|+++++++++. ++..++|. ..+++ ...+..+ ..+..++|+|+++.++ +++.++.+++|++.
T Consensus 84 ~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~ 161 (297)
T 2ojh_A 84 TICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDID 161 (297)
T ss_dssp CCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred cccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECC
Confidence 467889999999999999983 34555554 45544 3444433 3488999999998776 78889999999864
Q ss_pred CCCeeeEEeecceEeceEEEEECCCCcEEEEEc-CCCeEEEEeCC-CceeeeeecCCCccEEEEEEeCCCCEEEEccCC-
Q psy15417 93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSM-KTERAGILAGHDNRVSCLGVTEDGMAVATGSWD- 169 (176)
Q Consensus 93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~-~d~~i~v~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d- 169 (176)
+.+...... ....+..+.|+|+++.++.+. .++.+++|++. .......+..|...+..++|+|++.+|+.++.+
T Consensus 162 ~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 238 (297)
T 2ojh_A 162 SGVETRLTH---GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDA 238 (297)
T ss_dssp TCCEEECCC---SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEET
T ss_pred CCcceEccc---CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCC
Confidence 332221111 223577899999999776655 58889999865 445566677777888999999999999888766
Q ss_pred ----------CcEEEeC
Q psy15417 170 ----------SFLRIWN 176 (176)
Q Consensus 170 ----------~~v~vwd 176 (176)
+.+++||
T Consensus 239 ~~~~~~~~~~~~l~~~d 255 (297)
T 2ojh_A 239 DVFDHPRDLDVRVQLMD 255 (297)
T ss_dssp TCCSCCSSEEEEEEEEE
T ss_pred CCCcccccCceEEEEEe
Confidence 4588875
No 146
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.71 E-value=4.3e-15 Score=111.57 Aligned_cols=155 Identities=11% Similarity=0.084 Sum_probs=107.3
Q ss_pred ccCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCe-------e------eeEecCCCCCeeEEEEccCCcEEEEee-CCC
Q psy15417 20 TGDVMSLSLAPDMRTFVSGA-CDASAKLWDIRDGS-------C------KQTFPGHESDINAVTFFPNGWAFATGS-DDA 84 (176)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~s-~dg~v~~wd~~~~~-------~------~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~ 84 (176)
...+.+++|+|+++++++++ .++.|.+|++.... . ......+...+.+++|+|+++.++.++ .++
T Consensus 154 ~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 233 (361)
T 3scy_A 154 MPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGG 233 (361)
T ss_dssp SCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTC
T ss_pred CCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCC
Confidence 34568899999999665544 58899999887543 1 111223445678999999999877776 689
Q ss_pred cEEEeeCCCCCeeeEEee---cceEeceEEEEECCCCcEEEEEcC--CCeEEEEeCC--Cce--eeeeecCCCccEEEEE
Q psy15417 85 TCRLFDIRADQELAMYSH---DNIICGITSVAFSRSGRLLLAGYD--DFNCNVWDSM--KTE--RAGILAGHDNRVSCLG 155 (176)
Q Consensus 85 ~i~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~g~~--d~~i~v~d~~--~~~--~~~~~~~~~~~i~~~~ 155 (176)
.|.+|++.++........ .........++|+|++++++++.. ++.+.+|++. .++ .+..+.. ...+..++
T Consensus 234 ~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~ 312 (361)
T 3scy_A 234 TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFI 312 (361)
T ss_dssp EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEE
T ss_pred eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEE
Confidence 999999976543221111 111123568999999998866554 4899999975 233 3444443 44567899
Q ss_pred EeCCCCEEEEcc-CCCcEEEe
Q psy15417 156 VTEDGMAVATGS-WDSFLRIW 175 (176)
Q Consensus 156 ~~~~~~~l~tg~-~d~~v~vw 175 (176)
|+|+|++|++++ .++.|.+|
T Consensus 313 ~spdg~~l~~~~~~~~~v~v~ 333 (361)
T 3scy_A 313 ITPNGKYLLVACRDTNVIQIF 333 (361)
T ss_dssp ECTTSCEEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEEECCCCCEEEE
Confidence 999999887776 67889986
No 147
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.71 E-value=8.5e-16 Score=114.76 Aligned_cols=157 Identities=15% Similarity=0.120 Sum_probs=110.8
Q ss_pred CccCeEEEEEcCCCCEEEEEeC---CCeEEEEEcCCCe--eeeEecCCCCCeeEEEEccCCcEEEEee-CCCcEEEeeCC
Q psy15417 19 HTGDVMSLSLAPDMRTFVSGAC---DASAKLWDIRDGS--CKQTFPGHESDINAVTFFPNGWAFATGS-DDATCRLFDIR 92 (176)
Q Consensus 19 h~~~V~~~~~~~~~~~l~s~s~---dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~ 92 (176)
+...+..++|+|+++ |++++. ++.|.+||+.+++ .+..+..+...+..++|+|+++.+++++ .++.+.+|++.
T Consensus 38 ~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~ 116 (347)
T 3hfq_A 38 ATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIA 116 (347)
T ss_dssp ECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred ccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeC
Confidence 445667899999999 555554 6899999998776 3444455677889999999999888887 67899999986
Q ss_pred CCCeee---EEeecce-------EeceEEEEECCCCcEEEEEcCCCeEEEEeCC-Cceee--eeecCC-CccEEEEEEeC
Q psy15417 93 ADQELA---MYSHDNI-------ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM-KTERA--GILAGH-DNRVSCLGVTE 158 (176)
Q Consensus 93 ~~~~~~---~~~~~~~-------~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~-~~~~~--~~~~~~-~~~i~~~~~~~ 158 (176)
...... ....... ...+..++|+|+++++++...++.+++|++. .++.. .....+ ......++|+|
T Consensus 117 ~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~sp 196 (347)
T 3hfq_A 117 ADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSP 196 (347)
T ss_dssp TTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECT
T ss_pred CCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECC
Confidence 332222 1111110 1136789999999977777788999999987 34322 222222 23567899999
Q ss_pred CCCEEE-EccCCCcEEEeC
Q psy15417 159 DGMAVA-TGSWDSFLRIWN 176 (176)
Q Consensus 159 ~~~~l~-tg~~d~~v~vwd 176 (176)
+|++++ ++..++.+++|+
T Consensus 197 dg~~l~v~~~~~~~v~v~~ 215 (347)
T 3hfq_A 197 DGQYAFLAGELSSQIASLK 215 (347)
T ss_dssp TSSEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeCCCCEEEEEE
Confidence 999654 466788999985
No 148
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.71 E-value=6e-16 Score=130.93 Aligned_cols=156 Identities=13% Similarity=0.105 Sum_probs=126.9
Q ss_pred cCCCcc-CeEEEEEcCCCCEEEEEeCCCeEE-EEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417 16 ASGHTG-DVMSLSLAPDMRTFVSGACDASAK-LWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA 93 (176)
Q Consensus 16 ~~gh~~-~V~~~~~~~~~~~l~s~s~dg~v~-~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 93 (176)
+.+|.+ .+..+.|+ |++.++.++.+..+. +||+.+++.. .+.+|...+..++|+|+++.+++++.++.+++||+.+
T Consensus 332 ~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t 409 (1045)
T 1k32_A 332 VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET 409 (1045)
T ss_dssp CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCC
Confidence 456777 89999999 999999999888888 9999877644 4447888899999999999999999999999999988
Q ss_pred CCeeeEEeecceEeceEEEEECCCCcEEEEEcCCC----------eEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE
Q psy15417 94 DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDF----------NCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV 163 (176)
Q Consensus 94 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~----------~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 163 (176)
++....... +...+..++|+||+++++.++.++ .+++||+..++ ...+..|...+..++|+|+|.+|
T Consensus 410 g~~~~~~~~--~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l 486 (1045)
T 1k32_A 410 GKPTVIERS--REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNL 486 (1045)
T ss_dssp CCEEEEEEC--SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEE
T ss_pred CceEEeccC--CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEE
Confidence 766544321 223456789999999888776543 89999988776 56666787788889999999999
Q ss_pred EEccCCCcEEEeC
Q psy15417 164 ATGSWDSFLRIWN 176 (176)
Q Consensus 164 ~tg~~d~~v~vwd 176 (176)
+.++.++..++|+
T Consensus 487 ~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 487 YYLSYRSLDPSPD 499 (1045)
T ss_dssp EEEESCCCCCEEC
T ss_pred EEEecccCCcCcc
Confidence 9998887777664
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.70 E-value=1.1e-16 Score=130.04 Aligned_cols=160 Identities=9% Similarity=0.064 Sum_probs=117.3
Q ss_pred cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-----CeeeeEecCCCCC--------------eeEEEEccCCcE
Q psy15417 16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD-----GSCKQTFPGHESD--------------INAVTFFPNGWA 76 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~-----~~~~~~~~~h~~~--------------v~~v~~~~~~~~ 76 (176)
+..+.+.+.+++|+|||+.|+.+ .++.|++||+.+ ++.......+... +.++.|+|+++.
T Consensus 116 l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~ 194 (706)
T 2z3z_A 116 LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSC 194 (706)
T ss_dssp EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSE
T ss_pred ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCE
Confidence 34466778889999999999885 689999999998 7766544444333 488999999999
Q ss_pred EEEee---------------------------------CCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEE
Q psy15417 77 FATGS---------------------------------DDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLA 123 (176)
Q Consensus 77 l~s~s---------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 123 (176)
|+.++ .+..|.+||+.+++.........+...+..+.|+|+++.+++
T Consensus 195 la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 274 (706)
T 2z3z_A 195 LAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYV 274 (706)
T ss_dssp EEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEE
T ss_pred EEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEE
Confidence 99987 446799999987654332211112235778999999998888
Q ss_pred EcCCC-----eEEEEeCCCc-eeeeeec-CCCc---cEEEEEEeC--CCCEEEEccCCCcEEEeC
Q psy15417 124 GYDDF-----NCNVWDSMKT-ERAGILA-GHDN---RVSCLGVTE--DGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 124 g~~d~-----~i~v~d~~~~-~~~~~~~-~~~~---~i~~~~~~~--~~~~l~tg~~d~~v~vwd 176 (176)
+..++ .+++||..++ +...... .+.. .+..++|+| +|.++++++.|+.++||+
T Consensus 275 ~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~ 339 (706)
T 2z3z_A 275 AEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYL 339 (706)
T ss_dssp EEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEE
T ss_pred EEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEE
Confidence 77665 8999998887 3322221 1222 235678999 999999999999999883
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.69 E-value=2.3e-16 Score=133.49 Aligned_cols=152 Identities=11% Similarity=0.119 Sum_probs=125.8
Q ss_pred CccCeEEEEEc-CCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCC-CeeEEEEccCCcEEEEeeCCCcEE-EeeCCCCC
Q psy15417 19 HTGDVMSLSLA-PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHES-DINAVTFFPNGWAFATGSDDATCR-LFDIRADQ 95 (176)
Q Consensus 19 h~~~V~~~~~~-~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~-~v~~v~~~~~~~~l~s~s~d~~i~-iwd~~~~~ 95 (176)
|...+..++|+ ||++.+++++ ++.+.+|+..+++.. .+..|.. .+..++|+ ++..++.++.+..+. +|++.+.+
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~ 370 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK 370 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC
Confidence 45578999999 9999998888 889999999887644 4666777 89999999 999999999888888 88987655
Q ss_pred eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCC-----
Q psy15417 96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDS----- 170 (176)
Q Consensus 96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~----- 170 (176)
..... .+...+..++|+|+++.++++..++.+++||+.+++......+|...+..++|+|+|.+|++++.++
T Consensus 371 ~~~l~---~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~ 447 (1045)
T 1k32_A 371 AEKFE---ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETD 447 (1045)
T ss_dssp EEECC---CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTC
T ss_pred ceEec---CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCcccccc
Confidence 43222 2224577899999999999999999999999988887777768888888999999999998887654
Q ss_pred -----cEEEeC
Q psy15417 171 -----FLRIWN 176 (176)
Q Consensus 171 -----~v~vwd 176 (176)
.|++||
T Consensus 448 ~~~~~~i~l~d 458 (1045)
T 1k32_A 448 GYVMQAIHVYD 458 (1045)
T ss_dssp SCCEEEEEEEE
T ss_pred CCCCCeEEEEE
Confidence 899996
No 151
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.69 E-value=6.5e-15 Score=109.03 Aligned_cols=146 Identities=6% Similarity=0.021 Sum_probs=108.2
Q ss_pred EEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeC-CCcEEEeeCCCCCe-eeEEeec
Q psy15417 27 SLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD-DATCRLFDIRADQE-LAMYSHD 103 (176)
Q Consensus 27 ~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~~i~iwd~~~~~~-~~~~~~~ 103 (176)
.|.+++. .+++++.++.|.+||..+++....+..+..++ .++|+|+++.++.++. ++.|.+||+.+++. .......
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 4555544 57888889999999999999888887766667 9999999986666655 88999999988765 3333322
Q ss_pred ceEeceEEEEECCCCcEEEEEcCCC---eEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCc-EEEeC
Q psy15417 104 NIICGITSVAFSRSGRLLLAGYDDF---NCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSF-LRIWN 176 (176)
Q Consensus 104 ~~~~~v~~~~~~~~~~~l~~g~~d~---~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~-v~vwd 176 (176)
. .+...++|+|++++++++..++ .+.+||...++....+..+ .....++|+|+|.++ ++...++. +++|+
T Consensus 83 ~--~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~ 157 (331)
T 3u4y_A 83 Q--SSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFK 157 (331)
T ss_dssp S--SCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEE
T ss_pred C--CCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEE
Confidence 2 1233389999999888665553 8999999888877776544 345889999999754 45556677 99885
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.68 E-value=9.1e-16 Score=124.59 Aligned_cols=152 Identities=9% Similarity=0.001 Sum_probs=114.1
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC-----CC
Q psy15417 21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA-----DQ 95 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~-----~~ 95 (176)
..|.+++|+|| ..++.+. ++.+++||+.+++... +..+...+.+++|+|+|+.++.+ .++.|.+||+.+ ++
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSR 157 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCC
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCC
Confidence 56999999999 6555543 6999999999887554 44567778999999999998885 679999999987 65
Q ss_pred eeeEEeecce-E-----------eceEEEEECCCCcEEEEEc---------------------------------CCCeE
Q psy15417 96 ELAMYSHDNI-I-----------CGITSVAFSRSGRLLLAGY---------------------------------DDFNC 130 (176)
Q Consensus 96 ~~~~~~~~~~-~-----------~~v~~~~~~~~~~~l~~g~---------------------------------~d~~i 130 (176)
.......... . ..+..+.|+||++.|+.++ .+..+
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 4332211110 0 0136789999999998876 44679
Q ss_pred EEEeCCCceeeeeec--CCCccEEEEEEeCCCCEEEEccCCC-----cEEEeC
Q psy15417 131 NVWDSMKTERAGILA--GHDNRVSCLGVTEDGMAVATGSWDS-----FLRIWN 176 (176)
Q Consensus 131 ~v~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~tg~~d~-----~v~vwd 176 (176)
++||+..++...... .|...+..++|+|+|..|++++.|+ .|++||
T Consensus 238 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d 290 (706)
T 2z3z_A 238 GIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYD 290 (706)
T ss_dssp EEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEE
T ss_pred EEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEE
Confidence 999998876544332 4667789999999999999877765 788885
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.67 E-value=1.1e-15 Score=113.61 Aligned_cols=148 Identities=12% Similarity=0.111 Sum_probs=109.9
Q ss_pred CeEEEEEcCCCCEEEEEeCC------------CeEEEEEcCCCe---eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcE
Q psy15417 22 DVMSLSLAPDMRTFVSGACD------------ASAKLWDIRDGS---CKQTFPGHESDINAVTFFPNGWAFATGSDDATC 86 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s~s~d------------g~v~~wd~~~~~---~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i 86 (176)
.+..++|+|+++++++++.+ +.|.+||+.+++ ....+.. ...+.+++|+|+++ ++.++. .|
T Consensus 93 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l~~~~~--~i 168 (349)
T 1jmx_B 93 SMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-LYVAGP--DI 168 (349)
T ss_dssp CSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-EEEESS--SE
T ss_pred cccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-EEEccC--cE
Confidence 36789999999999998865 899999998854 3334443 34688999999999 555544 49
Q ss_pred EEeeCCCCCeeeEEeecc-------------------------e------------------------------------
Q psy15417 87 RLFDIRADQELAMYSHDN-------------------------I------------------------------------ 105 (176)
Q Consensus 87 ~iwd~~~~~~~~~~~~~~-------------------------~------------------------------------ 105 (176)
.+||+.+++......... .
T Consensus 169 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (349)
T 1jmx_B 169 YKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQ 248 (349)
T ss_dssp EEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEE
T ss_pred EEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEec
Confidence 999998776544332111 0
Q ss_pred -----EeceEEEEECC-CCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 106 -----ICGITSVAFSR-SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 106 -----~~~v~~~~~~~-~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
...+..+.++| ++..++++ ++.+.+||+.+++....+... ..+..++|+|++.+|++++.++.|++||
T Consensus 249 ~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~v~d 322 (349)
T 1jmx_B 249 EFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLAVFN 322 (349)
T ss_dssp EEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEEEEE
T ss_pred ccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEecCCCeEEEEe
Confidence 00234567889 99988888 889999999888876666533 3456899999998888888899999996
No 154
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.67 E-value=7.2e-16 Score=122.84 Aligned_cols=145 Identities=11% Similarity=-0.043 Sum_probs=111.3
Q ss_pred EEEEEcCCCC--EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCC----CcEEEeeCCCCCee
Q psy15417 24 MSLSLAPDMR--TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDD----ATCRLFDIRADQEL 97 (176)
Q Consensus 24 ~~~~~~~~~~--~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d----~~i~iwd~~~~~~~ 97 (176)
...+|+|+++ .+++++.++ +.+||+.+++.......+ . .+++|+|+|+.+++++.+ +.|.+||+.+++..
T Consensus 113 ~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~ 188 (582)
T 3o4h_A 113 RILSGVDTGEAVVFTGATEDR-VALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR 188 (582)
T ss_dssp EEEEEEECSSCEEEEEECSSC-EEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE
T ss_pred eeeeeCCCCCeEEEEecCCCC-ceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce
Confidence 3557777775 455555554 559999998766554433 3 889999999999988877 78999999877654
Q ss_pred eEEeecceEeceEEEEECCCCcEEEEEcCCC--eEEEEeCCCceeeeeecCCCccEEEEE--------EeCCCCEEEEcc
Q psy15417 98 AMYSHDNIICGITSVAFSRSGRLLLAGYDDF--NCNVWDSMKTERAGILAGHDNRVSCLG--------VTEDGMAVATGS 167 (176)
Q Consensus 98 ~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~--~i~v~d~~~~~~~~~~~~~~~~i~~~~--------~~~~~~~l~tg~ 167 (176)
...... ..+...+|+|||+.++++..++ +|++||+..++.. ....|...+..++ |+|+|..+++++
T Consensus 189 ~l~~~~---~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~ 264 (582)
T 3o4h_A 189 VFDSGE---GSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVAR 264 (582)
T ss_dssp EECCSS---CEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEE
T ss_pred EeecCC---CccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEE
Confidence 332222 3467899999999999888888 8999999887776 6666766666566 999998889999
Q ss_pred CCCcEEEeC
Q psy15417 168 WDSFLRIWN 176 (176)
Q Consensus 168 ~d~~v~vwd 176 (176)
.|+++++|+
T Consensus 265 ~~g~~~l~~ 273 (582)
T 3o4h_A 265 REGRSAVFI 273 (582)
T ss_dssp ETTEEEEEE
T ss_pred cCCcEEEEE
Confidence 999999994
No 155
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.67 E-value=4.3e-15 Score=109.74 Aligned_cols=141 Identities=13% Similarity=0.114 Sum_probs=108.2
Q ss_pred CEEEEEeCCCeEEEEEcCCCeeeeEecCCCC--CeeEEEEccCCcEE-EEeeCCCcEEEeeCCCCCeeeEEeecc---eE
Q psy15417 33 RTFVSGACDASAKLWDIRDGSCKQTFPGHES--DINAVTFFPNGWAF-ATGSDDATCRLFDIRADQELAMYSHDN---II 106 (176)
Q Consensus 33 ~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~--~v~~v~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~~---~~ 106 (176)
.++++++.++.|.+||..+++....+..... .+..++|+|+++.+ +++..++.|.+||+.+++.+....... ..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4788999999999999999998887764332 47889999999755 566667899999998877665444322 11
Q ss_pred eceEEEEECCCCcEEEEEc------------CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417 107 CGITSVAFSRSGRLLLAGY------------DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 174 (176)
Q Consensus 107 ~~v~~~~~~~~~~~l~~g~------------~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v 174 (176)
..+..++|+|+++.++++. .++.+.+||..+++....+.. ...+..++|+|++.+|+++ ++.|++
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEE
Confidence 2355789999998887775 578999999988777666654 3446778899999988777 578998
Q ss_pred eC
Q psy15417 175 WN 176 (176)
Q Consensus 175 wd 176 (176)
||
T Consensus 159 ~d 160 (337)
T 1pby_B 159 MD 160 (337)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 156
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.67 E-value=1.9e-15 Score=112.28 Aligned_cols=147 Identities=10% Similarity=0.074 Sum_probs=108.7
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCC-CCeeEEEEccCCcEE-EEeeCCCcEEEeeCCCCCeeeEEeec
Q psy15417 26 LSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHE-SDINAVTFFPNGWAF-ATGSDDATCRLFDIRADQELAMYSHD 103 (176)
Q Consensus 26 ~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~ 103 (176)
+++++++.++++++.+++|.+||..+++....+..+. ..+..++|+|+++.+ ++...++.|.+||+.+++........
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~ 84 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 84 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcc
Confidence 4567888899999999999999999999888887543 257899999999755 55567889999999887665444322
Q ss_pred ce----EeceEEEEECCCCcEEEEEcCC------------CeEEEEeCCCcee---eeeecCCCccEEEEEEeCCCCEEE
Q psy15417 104 NI----ICGITSVAFSRSGRLLLAGYDD------------FNCNVWDSMKTER---AGILAGHDNRVSCLGVTEDGMAVA 164 (176)
Q Consensus 104 ~~----~~~v~~~~~~~~~~~l~~g~~d------------~~i~v~d~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~ 164 (176)
.. ...+..++|+|+++.++++..+ +.+.+||+.+++. ..... +...+.+++|+|++. ++
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~ 162 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LY 162 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EE
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EE
Confidence 11 1235678999999988888754 8999999876432 22232 334577889999999 44
Q ss_pred EccCCCcEEEeC
Q psy15417 165 TGSWDSFLRIWN 176 (176)
Q Consensus 165 tg~~d~~v~vwd 176 (176)
.++.+ |++||
T Consensus 163 ~~~~~--i~~~d 172 (349)
T 1jmx_B 163 VAGPD--IYKMD 172 (349)
T ss_dssp EESSS--EEEEC
T ss_pred EccCc--EEEEe
Confidence 44443 88886
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.66 E-value=4.9e-16 Score=126.46 Aligned_cols=140 Identities=16% Similarity=0.167 Sum_probs=105.0
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCC---CeeEEEEccCCcEEEEeeC---------CCcEEEeeCC
Q psy15417 25 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHES---DINAVTFFPNGWAFATGSD---------DATCRLFDIR 92 (176)
Q Consensus 25 ~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~---~v~~v~~~~~~~~l~s~s~---------d~~i~iwd~~ 92 (176)
.++|+|+++++++ +.|++|++||+.+++....+..|.. .+.+++|+|||+.|+.++. ++.+++||+.
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 6789999965555 4699999999999987776665543 4899999999999988876 7899999998
Q ss_pred CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeee-cCCCccE-----------------EEE
Q psy15417 93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL-AGHDNRV-----------------SCL 154 (176)
Q Consensus 93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~-~~~~~~i-----------------~~~ 154 (176)
+++.+...... ..+..++|+|||+.++.+. ++.|++|++..++..... .++...+ ..+
T Consensus 99 ~g~~~~~~~l~---~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 99 NGEFVRGNELP---RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp TTEECCSSCCC---SSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred CCccccceecC---cccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence 76541101111 2466799999999888875 779999998776554322 2332222 478
Q ss_pred EEeCCCCEEEEccCC
Q psy15417 155 GVTEDGMAVATGSWD 169 (176)
Q Consensus 155 ~~~~~~~~l~tg~~d 169 (176)
+|+|||+.|+.++.|
T Consensus 175 ~wSPDG~~la~~~~d 189 (719)
T 1z68_A 175 WWSPNGKFLAYAEFN 189 (719)
T ss_dssp EECTTSSEEEEEEEE
T ss_pred EECCCCCEEEEEEEC
Confidence 999999999988765
No 158
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.65 E-value=8.2e-14 Score=101.38 Aligned_cols=154 Identities=17% Similarity=0.182 Sum_probs=115.9
Q ss_pred CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec--CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe
Q psy15417 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP--GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE 96 (176)
Q Consensus 19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 96 (176)
+...+.++++++++.++++...++.|.+||.. ++....+. ++...+.+++++|+++.+++...++.|.+||.. ++.
T Consensus 119 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~ 196 (286)
T 1q7f_A 119 ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQY 196 (286)
T ss_dssp TCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCE
T ss_pred cCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCE
Confidence 44568899999999988888888999999964 55555554 344568999999999988888888999999974 344
Q ss_pred eeEEeecceEeceEEEEECCCCcEEEEEcCCC-eEEEEeCCCceeeeeecCCC--ccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417 97 LAMYSHDNIICGITSVAFSRSGRLLLAGYDDF-NCNVWDSMKTERAGILAGHD--NRVSCLGVTEDGMAVATGSWDSFLR 173 (176)
Q Consensus 97 ~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~-~i~v~d~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~tg~~d~~v~ 173 (176)
+..+........+..+++++++.++++...++ .|++||. .++.+..+..+. .....++++|+|..+++ +.|++|+
T Consensus 197 ~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~ 274 (286)
T 1q7f_A 197 LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLY 274 (286)
T ss_dssp EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEE
T ss_pred EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEE
Confidence 44433222113466899999999988888775 9999994 555555554443 24678999999987777 5789999
Q ss_pred EeC
Q psy15417 174 IWN 176 (176)
Q Consensus 174 vwd 176 (176)
+|+
T Consensus 275 v~~ 277 (286)
T 1q7f_A 275 IYR 277 (286)
T ss_dssp EEE
T ss_pred EEE
Confidence 995
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.64 E-value=2.9e-14 Score=107.63 Aligned_cols=158 Identities=9% Similarity=0.019 Sum_probs=109.1
Q ss_pred CccCeEEEEEcCCCCEEEEEeC-CCeEEEEEcC-CCeee--eEec--CCCCCeeEEEEccCCcEEEEeeC-CCcEEEeeC
Q psy15417 19 HTGDVMSLSLAPDMRTFVSGAC-DASAKLWDIR-DGSCK--QTFP--GHESDINAVTFFPNGWAFATGSD-DATCRLFDI 91 (176)
Q Consensus 19 h~~~V~~~~~~~~~~~l~s~s~-dg~v~~wd~~-~~~~~--~~~~--~h~~~v~~v~~~~~~~~l~s~s~-d~~i~iwd~ 91 (176)
+...+.+++|+|++++++++.. ++.|.+||++ +++.. ..+. .|...+..++|+|+++.+++++. ++.+.+|++
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~ 222 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVI 222 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEE
Confidence 4567899999999998887664 6789999998 77643 3343 24567899999999998877765 688999986
Q ss_pred C--CCCeee---EEe-ecce---Ee-------ceEEEE-ECCCCcEEEEEcCCC------eEEEEeCC-Cceeee---ee
Q psy15417 92 R--ADQELA---MYS-HDNI---IC-------GITSVA-FSRSGRLLLAGYDDF------NCNVWDSM-KTERAG---IL 144 (176)
Q Consensus 92 ~--~~~~~~---~~~-~~~~---~~-------~v~~~~-~~~~~~~l~~g~~d~------~i~v~d~~-~~~~~~---~~ 144 (176)
. +++... ... .... .. .+..++ |+|++++++++..+. ++.+|++. .++... ..
T Consensus 223 ~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~ 302 (365)
T 1jof_A 223 DPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLS 302 (365)
T ss_dssp CTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEE
T ss_pred eCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeee
Confidence 5 333211 111 1100 01 367899 999999877665332 89999985 444332 13
Q ss_pred cCCCccEEEEEEeC---CCCEEEEccCC-CcEEEeC
Q psy15417 145 AGHDNRVSCLGVTE---DGMAVATGSWD-SFLRIWN 176 (176)
Q Consensus 145 ~~~~~~i~~~~~~~---~~~~l~tg~~d-~~v~vwd 176 (176)
..+......++|+| +|.+|++++.+ +.|++|+
T Consensus 303 ~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~ 338 (365)
T 1jof_A 303 PTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYR 338 (365)
T ss_dssp ECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEE
T ss_pred ecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEE
Confidence 23434455688999 89999888764 8999995
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.64 E-value=2.4e-15 Score=119.82 Aligned_cols=143 Identities=13% Similarity=0.016 Sum_probs=111.7
Q ss_pred EEEEEcCCCCEEEEEeCC----CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCC--cEEEeeCCCCCee
Q psy15417 24 MSLSLAPDMRTFVSGACD----ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA--TCRLFDIRADQEL 97 (176)
Q Consensus 24 ~~~~~~~~~~~l~s~s~d----g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~--~i~iwd~~~~~~~ 97 (176)
.++.|+|||+.+++++.+ +.|++||+.+++.. .+..|...+..++|+|||+.|+++..++ .|.+||+.+++..
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 688999999999988877 78999999988754 6778888899999999999999888888 8999999877654
Q ss_pred eEEeecceEeceEEEE--------ECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCC
Q psy15417 98 AMYSHDNIICGITSVA--------FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWD 169 (176)
Q Consensus 98 ~~~~~~~~~~~v~~~~--------~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d 169 (176)
.... +...+..+. |+||+.+++++..++++++|++ ++... .....+..++|+ ++..+++++.+
T Consensus 232 -~~~~--~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~ 302 (582)
T 3o4h_A 232 -DLEL--PSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSL 302 (582)
T ss_dssp -ECCC--SCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEET
T ss_pred -EccC--CCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCC
Confidence 3221 111222334 9999998999999999999998 55443 234678889999 88888888776
Q ss_pred Cc---EEEeC
Q psy15417 170 SF---LRIWN 176 (176)
Q Consensus 170 ~~---v~vwd 176 (176)
.+ +.+||
T Consensus 303 ~~p~~l~~~d 312 (582)
T 3o4h_A 303 STPPRIVSLP 312 (582)
T ss_dssp TEEEEEEEET
T ss_pred CCCCeEEEEc
Confidence 54 44443
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.62 E-value=1.1e-15 Score=124.44 Aligned_cols=150 Identities=17% Similarity=0.150 Sum_probs=108.2
Q ss_pred eEEEEEcCCCCEEEEEeC---------CCeEEEEEcCCCeee--eEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417 23 VMSLSLAPDMRTFVSGAC---------DASAKLWDIRDGSCK--QTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI 91 (176)
Q Consensus 23 V~~~~~~~~~~~l~s~s~---------dg~v~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~ 91 (176)
|.+++|||||++|+.++. ++++++||+.+++.+ ..+ ...+..++|+|+|+.|+.+. ++.|++|++
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~ 137 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQR 137 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESS
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeC
Confidence 889999999999998876 789999999998763 222 25688999999999998886 689999999
Q ss_pred CCCCeeeEEe--ecceE--------------eceEEEEECCCCcEEEEEcCCC---------------------------
Q psy15417 92 RADQELAMYS--HDNII--------------CGITSVAFSRSGRLLLAGYDDF--------------------------- 128 (176)
Q Consensus 92 ~~~~~~~~~~--~~~~~--------------~~v~~~~~~~~~~~l~~g~~d~--------------------------- 128 (176)
.+++...... ..... .....+.|+|||+.|+.++.|.
T Consensus 138 ~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~ 217 (719)
T 1z68_A 138 PGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKA 217 (719)
T ss_dssp TTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBT
T ss_pred CCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCC
Confidence 7765433211 11000 0113689999999998876542
Q ss_pred -------eEEEEeCCCceee--------eeecCCCccEEEEEEeCCCCEEEEccC--CC--cEEEeC
Q psy15417 129 -------NCNVWDSMKTERA--------GILAGHDNRVSCLGVTEDGMAVATGSW--DS--FLRIWN 176 (176)
Q Consensus 129 -------~i~v~d~~~~~~~--------~~~~~~~~~i~~~~~~~~~~~l~tg~~--d~--~v~vwd 176 (176)
.+++||+..++.. ..+.+|...+..++|+|++..+++... ++ .|.+||
T Consensus 218 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 218 GAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp TSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEE
T ss_pred CCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEc
Confidence 7889998876542 123467788999999999877766432 22 355554
No 162
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.61 E-value=3.4e-13 Score=100.45 Aligned_cols=156 Identities=11% Similarity=0.072 Sum_probs=119.9
Q ss_pred ccCeEEEEEcCCCCEEEEEeCC------------------------CeEEEEEcCCCeeeeEec-CCCCCeeEEEEccCC
Q psy15417 20 TGDVMSLSLAPDMRTFVSGACD------------------------ASAKLWDIRDGSCKQTFP-GHESDINAVTFFPNG 74 (176)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~s~d------------------------g~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~~~~ 74 (176)
-+.+.+++++|+++++++.+.+ ++|.+||..+++....+. ++-..+.+++++|++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4779999999999999988877 479999999998776665 344678999999999
Q ss_pred cEEEEeeCCCcEEEeeCCCCC-eeeEEee-------cceEeceEEEEECC-CCcEEEEEc-CCCeEEEEeCCCceeeeee
Q psy15417 75 WAFATGSDDATCRLFDIRADQ-ELAMYSH-------DNIICGITSVAFSR-SGRLLLAGY-DDFNCNVWDSMKTERAGIL 144 (176)
Q Consensus 75 ~~l~s~s~d~~i~iwd~~~~~-~~~~~~~-------~~~~~~v~~~~~~~-~~~~l~~g~-~d~~i~v~d~~~~~~~~~~ 144 (176)
+.+++...++.|++||..... .+..+.. .........++++| ++.++++.+ .++.|++|+ ..++....+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 998988889999999975442 3333321 11222467899999 788888886 689999999 556655555
Q ss_pred cC----------CCccEEEEEEeCC-CCEEEEccCCCcEEEeC
Q psy15417 145 AG----------HDNRVSCLGVTED-GMAVATGSWDSFLRIWN 176 (176)
Q Consensus 145 ~~----------~~~~i~~~~~~~~-~~~l~tg~~d~~v~vwd 176 (176)
.. +......++++|+ +.++++...+++|++||
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~ 224 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFK 224 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEE
Confidence 32 2234788999998 77888888899999985
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.60 E-value=5.9e-14 Score=105.92 Aligned_cols=154 Identities=8% Similarity=0.011 Sum_probs=108.4
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCeEEEEEcC-CCeeeeEec--CCCCCeeEEEEccCCcE--EEEee-------------C
Q psy15417 21 GDVMSLSLAPDMRTFVSGACDASAKLWDIR-DGSCKQTFP--GHESDINAVTFFPNGWA--FATGS-------------D 82 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~-~~~~~~~~~--~h~~~v~~v~~~~~~~~--l~s~s-------------~ 82 (176)
..+..++|+|++++|++++.+ .|.+|++. +++...... .+ +.+.+++|+|+++. +++++ .
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 457789999999999999888 99999997 777654332 12 23567899999984 55553 6
Q ss_pred CCcEEEeeCCC-CCeeeEEeec--ceEeceEEEEECCCCcEEEEEc-CCCeEEEEeCC-Cceee--eeec--CCCccEEE
Q psy15417 83 DATCRLFDIRA-DQELAMYSHD--NIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSM-KTERA--GILA--GHDNRVSC 153 (176)
Q Consensus 83 d~~i~iwd~~~-~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~g~-~d~~i~v~d~~-~~~~~--~~~~--~~~~~i~~ 153 (176)
++++.+|++.. ++........ .....+..++|+|++++++++. .+..|++|++. +++.. ..+. .|......
T Consensus 118 ~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~ 197 (365)
T 1jof_A 118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW 197 (365)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE
T ss_pred CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCE
Confidence 89999999864 4332222210 0113577899999999777654 46799999987 55432 2232 23556889
Q ss_pred EEEeCCCCEEEEccC-CCcEEEeC
Q psy15417 154 LGVTEDGMAVATGSW-DSFLRIWN 176 (176)
Q Consensus 154 ~~~~~~~~~l~tg~~-d~~v~vwd 176 (176)
++|+|+|+++++++. ++.|.+|+
T Consensus 198 ~~~spdg~~l~v~~~~~~~v~v~~ 221 (365)
T 1jof_A 198 VAMHPTGNYLYALMEAGNRICEYV 221 (365)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEE
T ss_pred eEECCCCCEEEEEECCCCeEEEEE
Confidence 999999998876654 67898873
No 164
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.60 E-value=8.5e-14 Score=103.75 Aligned_cols=158 Identities=11% Similarity=0.182 Sum_probs=118.8
Q ss_pred CCccCeEEEEEcC-CCCEEEEEe-CCCeEEEEEcCCCeeeeEecCC----------CCCeeEEEEccC-CcEEEEeeCCC
Q psy15417 18 GHTGDVMSLSLAP-DMRTFVSGA-CDASAKLWDIRDGSCKQTFPGH----------ESDINAVTFFPN-GWAFATGSDDA 84 (176)
Q Consensus 18 gh~~~V~~~~~~~-~~~~l~s~s-~dg~v~~wd~~~~~~~~~~~~h----------~~~v~~v~~~~~-~~~l~s~s~d~ 84 (176)
++......++|+| ++.++++.+ .++.|++|| .+++....+... -....+++++|+ +..+++...++
T Consensus 140 ~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~ 218 (329)
T 3fvz_A 140 NHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENG 218 (329)
T ss_dssp TCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTT
T ss_pred cccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCC
Confidence 4555788999999 788888886 689999999 567766666422 234889999998 88888888889
Q ss_pred cEEEeeCCCCCeeeEEeecceEeceEEEEECC------CCcEEEEEcCCCeEEEEeCCCceeeeee---cCCCccEEEEE
Q psy15417 85 TCRLFDIRADQELAMYSHDNIICGITSVAFSR------SGRLLLAGYDDFNCNVWDSMKTERAGIL---AGHDNRVSCLG 155 (176)
Q Consensus 85 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~l~~g~~d~~i~v~d~~~~~~~~~~---~~~~~~i~~~~ 155 (176)
.|++|+..+++.+..+........+..+.++| ++..+++...+.++++|+...++.+..+ .++......++
T Consensus 219 ~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia 298 (329)
T 3fvz_A 219 RIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIV 298 (329)
T ss_dssp EEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEE
T ss_pred EEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEE
Confidence 99999998676665553322223456788888 3333333344568999998888887776 35667789999
Q ss_pred EeCCCCEEEEccCCCcEEEeC
Q psy15417 156 VTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 156 ~~~~~~~l~tg~~d~~v~vwd 176 (176)
++|+|..+++...+++|++|+
T Consensus 299 ~~~dG~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 299 ASEDGTVYIGDAHTNTVWKFT 319 (329)
T ss_dssp ECTTSEEEEEESSSCCEEEEE
T ss_pred ECCCCCEEEEECCCCEEEEEe
Confidence 999998888999999999985
No 165
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.59 E-value=2.2e-13 Score=102.21 Aligned_cols=156 Identities=13% Similarity=0.084 Sum_probs=106.2
Q ss_pred CccCeEEEEEcCCCCEEEEEeCC----CeEEEEEcCC--Ce--eeeEecCCCCCeeEEEEccCCcEEEEee-CCCcEEEe
Q psy15417 19 HTGDVMSLSLAPDMRTFVSGACD----ASAKLWDIRD--GS--CKQTFPGHESDINAVTFFPNGWAFATGS-DDATCRLF 89 (176)
Q Consensus 19 h~~~V~~~~~~~~~~~l~s~s~d----g~v~~wd~~~--~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~~i~iw 89 (176)
|...+..++|+|++++|++++.+ +.+.+|+++. ++ .+.....+......+++ +++.+++++ .++.+.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 45666779999999999999886 7999998865 54 33444445566777887 777666665 57899999
Q ss_pred eCCCCCeee----EEeecc--------eEeceEEEEECCCCcEE-EEEcCCCeEEEEeCCCce-------e------eee
Q psy15417 90 DIRADQELA----MYSHDN--------IICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMKTE-------R------AGI 143 (176)
Q Consensus 90 d~~~~~~~~----~~~~~~--------~~~~v~~~~~~~~~~~l-~~g~~d~~i~v~d~~~~~-------~------~~~ 143 (176)
++.....+. ...+.. ....+..++|+|+++.+ ++...++.+++|++.... . ...
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 986543321 111111 01124679999999855 555568899999865432 1 111
Q ss_pred ecCCCccEEEEEEeCCCCEEEEcc-CCCcEEEeC
Q psy15417 144 LAGHDNRVSCLGVTEDGMAVATGS-WDSFLRIWN 176 (176)
Q Consensus 144 ~~~~~~~i~~~~~~~~~~~l~tg~-~d~~v~vwd 176 (176)
...+......++|+|+|.++++++ .++.|++||
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~ 239 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFR 239 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEE
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEE
Confidence 223344568899999999776665 688999995
No 166
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.58 E-value=1.4e-13 Score=103.98 Aligned_cols=153 Identities=13% Similarity=0.008 Sum_probs=111.4
Q ss_pred cCCCccCeEE-----EEEcCCCCEEEEEeC-CCe--EEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEE
Q psy15417 16 ASGHTGDVMS-----LSLAPDMRTFVSGAC-DAS--AKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCR 87 (176)
Q Consensus 16 ~~gh~~~V~~-----~~~~~~~~~l~s~s~-dg~--v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~ 87 (176)
++.|...... .+|+|||+.|+.++. ++. +.+||+.+++......++...+..+.|+|+++.|+.++.++.+.
T Consensus 26 lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~ 105 (388)
T 3pe7_A 26 LTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLM 105 (388)
T ss_dssp CSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEE
T ss_pred ecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEE
Confidence 4556555555 789999998888887 664 88889999987777776766666788999999999999999999
Q ss_pred EeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEE----------------------cCCCeEEEEeCCCceeeeeec
Q psy15417 88 LFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAG----------------------YDDFNCNVWDSMKTERAGILA 145 (176)
Q Consensus 88 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g----------------------~~d~~i~v~d~~~~~~~~~~~ 145 (176)
+||+.+++..................++|++..++.. ..+..|.+||+.+++... +.
T Consensus 106 ~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-l~ 184 (388)
T 3pe7_A 106 RVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV-IL 184 (388)
T ss_dssp EEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE-EE
T ss_pred EEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE-ee
Confidence 9999887765554433221111223458999887642 244679999988775433 33
Q ss_pred CCCccEEEEEEeC-CCCEEEEccCC
Q psy15417 146 GHDNRVSCLGVTE-DGMAVATGSWD 169 (176)
Q Consensus 146 ~~~~~i~~~~~~~-~~~~l~tg~~d 169 (176)
.+...+..++|+| +|..|+.++.+
T Consensus 185 ~~~~~~~~~~~sp~dg~~l~~~~~~ 209 (388)
T 3pe7_A 185 QENQWLGHPIYRPYDDSTVAFCHEG 209 (388)
T ss_dssp EESSCEEEEEEETTEEEEEEEEECS
T ss_pred cCCccccccEECCCCCCEEEEEEec
Confidence 4556788999999 99888766653
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.58 E-value=8.6e-14 Score=112.22 Aligned_cols=153 Identities=8% Similarity=0.016 Sum_probs=112.4
Q ss_pred CccCeEEEEEcCCCCEEEEEeCC----------CeEEEEEcCC------CeeeeEec-CCCCCeeEEEEccCCcEEEEee
Q psy15417 19 HTGDVMSLSLAPDMRTFVSGACD----------ASAKLWDIRD------GSCKQTFP-GHESDINAVTFFPNGWAFATGS 81 (176)
Q Consensus 19 h~~~V~~~~~~~~~~~l~s~s~d----------g~v~~wd~~~------~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~s 81 (176)
|...+..++|+|||+.|+.++.+ ..|.+||+.+ ++. ..+. .+...+..++|+|||+.|+.++
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~ 206 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLA 206 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEE
Confidence 67788999999999999988877 5799999987 553 4555 5566788899999999998777
Q ss_pred CCC--------cEEEeeCC-CC---CeeeEEeecceEeceEEEEECCCCcEEEEEcCCC--eEEEEeCCCceeeeeecCC
Q psy15417 82 DDA--------TCRLFDIR-AD---QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDF--NCNVWDSMKTERAGILAGH 147 (176)
Q Consensus 82 ~d~--------~i~iwd~~-~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~--~i~v~d~~~~~~~~~~~~~ 147 (176)
.++ .|.+||+. ++ +........ ...+..+.|+||+++++++..++ .+.+||...++.......+
T Consensus 207 ~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~--~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~ 284 (662)
T 3azo_A 207 WDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP--EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRRE 284 (662)
T ss_dssp ECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET--TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCS
T ss_pred CCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC--CceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccc
Confidence 553 69999998 45 222222211 13467889999999888888888 6667776555544333333
Q ss_pred Ccc--------EEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417 148 DNR--------VSCLGVTEDGMAVATGSWDSFLRIW 175 (176)
Q Consensus 148 ~~~--------i~~~~~~~~~~~l~tg~~d~~v~vw 175 (176)
... +..++|+|++.++++++. +.++||
T Consensus 285 ~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 319 (662)
T 3azo_A 285 EEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLG 319 (662)
T ss_dssp SBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEE
T ss_pred ccccCccccccCceEeEeCCCEEEEEEEc-CccEEE
Confidence 221 456889999999999988 999988
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.58 E-value=1.2e-14 Score=119.13 Aligned_cols=149 Identities=15% Similarity=0.135 Sum_probs=109.0
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCC-----eeEEEEccCCcEEEEeeCC---------CcE
Q psy15417 21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD-----INAVTFFPNGWAFATGSDD---------ATC 86 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~-----v~~v~~~~~~~~l~s~s~d---------~~i 86 (176)
.....+.|+||+++++++ |++|++||+.++++...+.+|... ...+.|+|||+.++.++.+ +.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 345689999999988886 999999999999988888877632 2448899999999998876 455
Q ss_pred EEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeee-eecCCCccE--------------
Q psy15417 87 RLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG-ILAGHDNRV-------------- 151 (176)
Q Consensus 87 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~-~~~~~~~~i-------------- 151 (176)
.+||+.+++........ ..+...+|+|||+.++.+ .++.|++|++..++... +..++...+
T Consensus 95 ~~~d~~~~~~~~l~~~~---~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 95 DIYDLNKRQLITEERIP---NNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEETTTTEECCSSCCC---TTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTS
T ss_pred EEEECCCCcEEEcccCC---CcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhc
Confidence 69999887643322222 356789999999988777 46799999987765433 222333222
Q ss_pred ---EEEEEeCCCCEEEEccCCCc-EEEe
Q psy15417 152 ---SCLGVTEDGMAVATGSWDSF-LRIW 175 (176)
Q Consensus 152 ---~~~~~~~~~~~l~tg~~d~~-v~vw 175 (176)
..++|+|||+.||.++.|.+ +++|
T Consensus 171 ~~~~~~~wSpDg~~la~~~~d~~~v~~~ 198 (740)
T 4a5s_A 171 SAYSALWWSPNGTFLAYAQFNDTEVPLI 198 (740)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCEE
T ss_pred CCCcceEECCCCCEEEEEEEcccCCceE
Confidence 24789999999998765443 4444
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.57 E-value=1.6e-12 Score=94.48 Aligned_cols=156 Identities=11% Similarity=0.147 Sum_probs=116.3
Q ss_pred CCccCeEEEEE-cCCCCEEEEEeC-CCeEEEEEcCCCeeeeEecC-CCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 18 GHTGDVMSLSL-APDMRTFVSGAC-DASAKLWDIRDGSCKQTFPG-HESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 18 gh~~~V~~~~~-~~~~~~l~s~s~-dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
+|...+..+++ .+++.++++... ++.|.+|| .+++....+.. +...+.++++.|+++.+++...++.|.+||.. +
T Consensus 74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 151 (286)
T 1q7f_A 74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-G 151 (286)
T ss_dssp TCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred ccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-C
Confidence 45567889999 467776666643 88999999 56776666643 34568999999999988888888999999964 4
Q ss_pred CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC--CccEEEEEEeCCCCEEEEccCCC-c
Q psy15417 95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH--DNRVSCLGVTEDGMAVATGSWDS-F 171 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~tg~~d~-~ 171 (176)
+.+..+........+..++++|++.++++...++.|++||. .++.+..+..+ ......++++++|.++++...++ .
T Consensus 152 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~ 230 (286)
T 1q7f_A 152 NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFN 230 (286)
T ss_dssp CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCE
T ss_pred CEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEE
Confidence 44444432222234678999999998888888999999996 45555555433 35678999999999888887776 9
Q ss_pred EEEeC
Q psy15417 172 LRIWN 176 (176)
Q Consensus 172 v~vwd 176 (176)
|++||
T Consensus 231 i~~~~ 235 (286)
T 1q7f_A 231 LTIFT 235 (286)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99986
No 170
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.55 E-value=2e-12 Score=95.92 Aligned_cols=159 Identities=11% Similarity=0.070 Sum_probs=112.8
Q ss_pred CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCC----CcEEEeeCC
Q psy15417 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDD----ATCRLFDIR 92 (176)
Q Consensus 17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d----~~i~iwd~~ 92 (176)
.++...+.+++|++++++++++..++.|.+||.++++.......+...+.+++++|+++.+++...+ +.|.+||..
T Consensus 41 ~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~ 120 (333)
T 2dg1_A 41 SKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN 120 (333)
T ss_dssp ESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT
T ss_pred eccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCC
Confidence 3455667899999999988888889999999999887655444566789999999999888877766 689999987
Q ss_pred CCCeeeEEeecceEeceEEEEECCCCcEEEEEcC------CCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EE
Q psy15417 93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYD------DFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-AT 165 (176)
Q Consensus 93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~------d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~t 165 (176)
+...............+..+.++|++.++++... .+.+..+|...++... +.........++|+|++..| ++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~ 199 (333)
T 2dg1_A 121 GDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVT 199 (333)
T ss_dssp SCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEE
T ss_pred CCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEE
Confidence 6654322221111235778999999998877654 3556667754433322 22223346789999999755 45
Q ss_pred ccCCCcEEEeC
Q psy15417 166 GSWDSFLRIWN 176 (176)
Q Consensus 166 g~~d~~v~vwd 176 (176)
.+.++.|.+||
T Consensus 200 ~~~~~~i~~~d 210 (333)
T 2dg1_A 200 ETTANRLHRIA 210 (333)
T ss_dssp EGGGTEEEEEE
T ss_pred eCCCCeEEEEE
Confidence 55677888875
No 171
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.52 E-value=1.6e-12 Score=99.03 Aligned_cols=133 Identities=11% Similarity=0.035 Sum_probs=106.1
Q ss_pred CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA 98 (176)
Q Consensus 19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~ 98 (176)
+.. |+.++| ++..|+++ .++.|++||+++-......+.|..++.++.+.+. .++.+..||.+.+||+++++...
T Consensus 87 lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~ 160 (388)
T 1xip_A 87 IPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ 160 (388)
T ss_dssp CTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE
T ss_pred CCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc
Confidence 556 999999 88999998 7899999999876655566677888988776654 38999999999999998766532
Q ss_pred EEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCcee--eeee------c---CCCccEEEEEEeCCCCEEEE
Q psy15417 99 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER--AGIL------A---GHDNRVSCLGVTEDGMAVAT 165 (176)
Q Consensus 99 ~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~--~~~~------~---~~~~~i~~~~~~~~~~~l~t 165 (176)
....|.+++|+|+| ++.|..||++++|+....+. ..++ . +|...|.++.|.+++.++++
T Consensus 161 ------~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 161 ------LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp ------EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred ------ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 23478999999999 67788999999998766553 3344 2 36788999999999888775
No 172
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.51 E-value=3.3e-12 Score=93.44 Aligned_cols=156 Identities=8% Similarity=-0.021 Sum_probs=115.4
Q ss_pred CCCccCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417 17 SGHTGDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95 (176)
Q Consensus 17 ~gh~~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 95 (176)
..+.....++.|+|+++ +++++..++.|..||..++ ...+..+...+.+++++|+++.+++...++.|.+||..+++
T Consensus 24 ~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 24 ADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp ECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCC
T ss_pred ecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCc
Confidence 34556778999999998 7888888999999999887 56677777889999999999988887777899999987665
Q ss_pred eeeEEee-cce-EeceEEEEECCCCcEEEE----Ec-------------CCCeEEEEeCCCceeeeeecCCCccEEEEEE
Q psy15417 96 ELAMYSH-DNI-ICGITSVAFSRSGRLLLA----GY-------------DDFNCNVWDSMKTERAGILAGHDNRVSCLGV 156 (176)
Q Consensus 96 ~~~~~~~-~~~-~~~v~~~~~~~~~~~l~~----g~-------------~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 156 (176)
....... ... ...++.++++|+|+++++ |. ..+.+..++.. ++ ......+......++|
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~ 179 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAF 179 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEE
T ss_pred EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEE
Confidence 4332211 111 123567899999998887 33 13456666644 33 3334445566788999
Q ss_pred eCCCCEEEEccCCCcEEEeC
Q psy15417 157 TEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 157 ~~~~~~l~tg~~d~~v~vwd 176 (176)
+|++..+++.+.++.|++||
T Consensus 180 s~dg~~lv~~~~~~~i~~~~ 199 (296)
T 3e5z_A 180 LPSGNLLVSDTGDNATHRYC 199 (296)
T ss_dssp CTTSCEEEEETTTTEEEEEE
T ss_pred CCCCCEEEEeCCCCeEEEEE
Confidence 99999888888888998885
No 173
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.50 E-value=1.9e-12 Score=94.47 Aligned_cols=142 Identities=13% Similarity=0.038 Sum_probs=110.4
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCC-CCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEec
Q psy15417 30 PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHE-SDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICG 108 (176)
Q Consensus 30 ~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~ 108 (176)
.+++++++++.|+.|.+||.++++.++++..+. ..+.++.+.|+|+.++ +.++.+..||. +++.+..+..... ..
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~-~~ 78 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAG-CE 78 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTT-CE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCC-cc
Confidence 356889999999999999999999999998876 5789999999999888 45678999998 7776666554311 24
Q ss_pred eEEEEECCCCcEEEEEcC-CCeEEEEeCCCceeeeeec------CCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 109 ITSVAFSRSGRLLLAGYD-DFNCNVWDSMKTERAGILA------GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 109 v~~~~~~~~~~~l~~g~~-d~~i~v~d~~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
+.++.+.|++.++++.+. ++.+..+|. .++.+..+. .+......+++.++|+++++...++.|..||
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d 152 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIA 152 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEEC
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEEC
Confidence 667889999999999877 778888884 566555443 1212334457889999999999999999986
No 174
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.49 E-value=4e-13 Score=110.08 Aligned_cols=151 Identities=14% Similarity=0.050 Sum_probs=105.9
Q ss_pred EEEEEcCCCCEEEEEeCC---------CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 24 MSLSLAPDMRTFVSGACD---------ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 24 ~~~~~~~~~~~l~s~s~d---------g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
....||||+++++.++.+ +.+.+||+.++++. .+..|...+...+|+|+|+.|+.++ ++.|.+|++.++
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~ 142 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNL 142 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTS
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCC
Confidence 447889999999998876 55679999999855 4667788899999999999998885 689999998776
Q ss_pred CeeeEEe--ecceE--------------eceEEEEECCCCcEEEEEcCC-------------------------------
Q psy15417 95 QELAMYS--HDNII--------------CGITSVAFSRSGRLLLAGYDD------------------------------- 127 (176)
Q Consensus 95 ~~~~~~~--~~~~~--------------~~v~~~~~~~~~~~l~~g~~d------------------------------- 127 (176)
+...... ..... .....+.|+|||+.|+....|
T Consensus 143 ~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G 222 (740)
T 4a5s_A 143 PSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAG 222 (740)
T ss_dssp CCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTT
T ss_pred ceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCc
Confidence 5432211 11000 011247899999988776421
Q ss_pred -----CeEEEEeCCC---ce--eeeeec------CCCccEEEEEEeCCCCEEEEc----cCCCcEEEeC
Q psy15417 128 -----FNCNVWDSMK---TE--RAGILA------GHDNRVSCLGVTEDGMAVATG----SWDSFLRIWN 176 (176)
Q Consensus 128 -----~~i~v~d~~~---~~--~~~~~~------~~~~~i~~~~~~~~~~~l~tg----~~d~~v~vwd 176 (176)
.++++||+.. ++ ....+. +|...+..++|+|+|+.++.. +.+..|++||
T Consensus 223 ~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d 291 (740)
T 4a5s_A 223 AVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICD 291 (740)
T ss_dssp SCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEE
T ss_pred CcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEE
Confidence 1588899877 62 222222 377789999999999865543 3334677775
No 175
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.48 E-value=9.7e-13 Score=99.44 Aligned_cols=153 Identities=9% Similarity=0.112 Sum_probs=110.9
Q ss_pred CccCeEEEEEcCCCCEEEEEeC----------CCeEEEEEcCCCeeeeEecCC------CCCeeEEEEccCCcEEEEeeC
Q psy15417 19 HTGDVMSLSLAPDMRTFVSGAC----------DASAKLWDIRDGSCKQTFPGH------ESDINAVTFFPNGWAFATGSD 82 (176)
Q Consensus 19 h~~~V~~~~~~~~~~~l~s~s~----------dg~v~~wd~~~~~~~~~~~~h------~~~v~~v~~~~~~~~l~s~s~ 82 (176)
+..+ .+.|+||++++++++. +++|.+||..+.+.+.++... ......++|+|++++++++..
T Consensus 50 g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~ 127 (361)
T 2oiz_A 50 AFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNA 127 (361)
T ss_dssp CEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEE
T ss_pred CCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECC
Confidence 4444 7999999999998863 667999999998887777532 234678999999999988864
Q ss_pred --CCcEEEeeCCCCCeeeE-Eee------------------------------c--ceEe--------------------
Q psy15417 83 --DATCRLFDIRADQELAM-YSH------------------------------D--NIIC-------------------- 107 (176)
Q Consensus 83 --d~~i~iwd~~~~~~~~~-~~~------------------------------~--~~~~-------------------- 107 (176)
+++|.+||+.+.+.+.. ... . ....
T Consensus 128 ~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 207 (361)
T 2oiz_A 128 SPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAP 207 (361)
T ss_dssp SSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCC
T ss_pred CCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEe
Confidence 57899999866543322 000 0 0000
Q ss_pred -----------------------------------------------ceEEEEECCCCcEEEEEcC-----------CCe
Q psy15417 108 -----------------------------------------------GITSVAFSRSGRLLLAGYD-----------DFN 129 (176)
Q Consensus 108 -----------------------------------------------~v~~~~~~~~~~~l~~g~~-----------d~~ 129 (176)
+...++|+|++..+++... ...
T Consensus 208 ~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~ 287 (361)
T 2oiz_A 208 ALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAE 287 (361)
T ss_dssp EECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSE
T ss_pred cccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCce
Confidence 0001567888666555432 347
Q ss_pred EEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 130 CNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 130 i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
+.+||..+.+.+..+..+. ...++|+|+|++|++++. +.|.+||
T Consensus 288 v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D 331 (361)
T 2oiz_A 288 IWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYD 331 (361)
T ss_dssp EEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEE
T ss_pred EEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEE
Confidence 9999999999998888776 789999999999988876 9999996
No 176
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.48 E-value=5.7e-13 Score=107.42 Aligned_cols=147 Identities=9% Similarity=0.039 Sum_probs=102.5
Q ss_pred EEEEc--CCCCE-EEEEeC-CCeEEEEEcC--C-CeeeeEecC-----CCCCeeEEEEccCCcEEEEeeCC---------
Q psy15417 25 SLSLA--PDMRT-FVSGAC-DASAKLWDIR--D-GSCKQTFPG-----HESDINAVTFFPNGWAFATGSDD--------- 83 (176)
Q Consensus 25 ~~~~~--~~~~~-l~s~s~-dg~v~~wd~~--~-~~~~~~~~~-----h~~~v~~v~~~~~~~~l~s~s~d--------- 83 (176)
...|+ ||++. ++..+. +..|.++++. . ++ ...+.. |...+.+++|+|+|+.|+.++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~ 159 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDV 159 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCc
Confidence 45555 99988 665543 4556666665 2 33 445555 56778999999999999988877
Q ss_pred -CcEEEeeCCC------CCeeeEE-eecceEeceEEEEECCCCcEEEEEcCC--------CeEEEEeCC-Cc---eeeee
Q psy15417 84 -ATCRLFDIRA------DQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDD--------FNCNVWDSM-KT---ERAGI 143 (176)
Q Consensus 84 -~~i~iwd~~~------~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~g~~d--------~~i~v~d~~-~~---~~~~~ 143 (176)
..|.+||+.+ ++..... ... ..+..+.|+|||+.++..+.+ ..|++||+. .+ +....
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l 236 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDAH---RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTL 236 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSCS---SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEE
T ss_pred eeEEEEEECCCCccccCCceeEEEecCC---CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEe
Confidence 5799999877 4332222 111 235567899999988776644 379999987 45 44444
Q ss_pred ecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417 144 LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175 (176)
Q Consensus 144 ~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw 175 (176)
...|...+..++|+|+|.+++++..++..+||
T Consensus 237 ~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~ 268 (662)
T 3azo_A 237 LGGPEEAIAQAEWAPDGSLIVATDRTGWWNLH 268 (662)
T ss_dssp EEETTBCEEEEEECTTSCEEEEECTTSSCEEE
T ss_pred CCCCCceEcceEECCCCeEEEEECCCCCeEEE
Confidence 44556788999999999988888888844444
No 177
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.46 E-value=6.5e-12 Score=94.73 Aligned_cols=155 Identities=9% Similarity=-0.012 Sum_probs=107.3
Q ss_pred CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEE--EccCCcEEEEe---------------
Q psy15417 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVT--FFPNGWAFATG--------------- 80 (176)
Q Consensus 18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~--~~~~~~~l~s~--------------- 80 (176)
+|...+....|+||++.|+.++.++.+.+||+.+++....+..+...+.... ++|++..++..
T Consensus 78 ~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~ 157 (388)
T 3pe7_A 78 GRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKK 157 (388)
T ss_dssp SSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHH
T ss_pred CCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccch
Confidence 4555555678999999999999999999999999987766666665554444 47888887742
Q ss_pred -------eCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECC-CCcEEEEEcCC------CeEEEEeCCCceeeeeecC
Q psy15417 81 -------SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR-SGRLLLAGYDD------FNCNVWDSMKTERAGILAG 146 (176)
Q Consensus 81 -------s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~g~~d------~~i~v~d~~~~~~~~~~~~ 146 (176)
..+..|.+||+.+++......... .+..+.|+| ++..++....+ ..+.++|...++.. .+..
T Consensus 158 ~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~---~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~ 233 (388)
T 3pe7_A 158 FHEFYFTKPCCRLMRVDLKTGESTVILQENQ---WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKT 233 (388)
T ss_dssp HHHHGGGCCCEEEEEEETTTCCEEEEEEESS---CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCC
T ss_pred hhhhhccCCcceEEEEECCCCceEEeecCCc---cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-Eeee
Confidence 244679999998876544433332 356789999 99877665543 36888886554433 3333
Q ss_pred CC--ccEEEEEEeCCCCEEEEccCC-----CcEEEeC
Q psy15417 147 HD--NRVSCLGVTEDGMAVATGSWD-----SFLRIWN 176 (176)
Q Consensus 147 ~~--~~i~~~~~~~~~~~l~tg~~d-----~~v~vwd 176 (176)
+. ..+...+|+|+|..|+..+.+ ..|++||
T Consensus 234 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 270 (388)
T 3pe7_A 234 HAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSAD 270 (388)
T ss_dssp CCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEEC
T ss_pred CCCCcccccceECCCCCEEEEEecCCCCCcceEEEEe
Confidence 33 357788999999977654331 2388886
No 178
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.44 E-value=2.2e-12 Score=98.19 Aligned_cols=138 Identities=13% Similarity=0.071 Sum_probs=102.7
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe-----------eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEee
Q psy15417 22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGS-----------CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFD 90 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~-----------~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd 90 (176)
+++.+++++...++++|+.++ +.+|+..+.+ ..... .+.. |+.++| ++..|+.+ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 688999999999999999885 6669865332 11222 2556 999999 88888888 889999999
Q ss_pred CCCCCeeeEE-eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCC
Q psy15417 91 IRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWD 169 (176)
Q Consensus 91 ~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d 169 (176)
+++....... .+. .++..+.+.+. .++++..||.+.+||+..+.... +...|.|++|+|+| ++.|..|
T Consensus 113 v~sl~~~~~~~~~~---~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 113 LEELSEFRTVTSFE---KPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp SSSTTCEEEEEECS---SCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETT
T ss_pred chhhhccCccceee---cceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcC
Confidence 8765543322 222 24556555443 38888999999999988665533 34679999999998 6788899
Q ss_pred CcEEEeC
Q psy15417 170 SFLRIWN 176 (176)
Q Consensus 170 ~~v~vwd 176 (176)
|++++|+
T Consensus 182 g~i~~~~ 188 (388)
T 1xip_A 182 RSFQSFA 188 (388)
T ss_dssp SCEEEEE
T ss_pred CcEEEEc
Confidence 9999984
No 179
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.44 E-value=2.5e-11 Score=87.23 Aligned_cols=154 Identities=9% Similarity=0.030 Sum_probs=112.6
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE
Q psy15417 21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY 100 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 100 (176)
..+..+++++++.++++...++.|.+|+..+.............+.++++.|+++.+++...++.|.+||........ .
T Consensus 108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~-~ 186 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV-L 186 (270)
T ss_dssp SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEE-C
T ss_pred CCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEe-e
Confidence 568899999999988887778899999876554332222233467889999999877777778899999986554322 1
Q ss_pred eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 101 SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 101 ~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
.... ...+..+++++++.++++...++.+.+|+............+...+..+++.++|..+++...+++|++|+
T Consensus 187 ~~~~-~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 187 PFTD-ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLT 261 (270)
T ss_dssp CCSS-CCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred cccC-CCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEc
Confidence 1111 13466899999998888888888999999755433332223335678999999999888988999999885
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.43 E-value=7.4e-12 Score=102.10 Aligned_cols=157 Identities=11% Similarity=0.005 Sum_probs=106.3
Q ss_pred CCccCeEEEEEcCCCCEEEEEeCCC-----eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCc-------
Q psy15417 18 GHTGDVMSLSLAPDMRTFVSGACDA-----SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDAT------- 85 (176)
Q Consensus 18 gh~~~V~~~~~~~~~~~l~s~s~dg-----~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~------- 85 (176)
+|...+..++|||||++|+.++.++ +|++||+.+++.......+ ..+.+++|+||++.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 4555688999999999888766543 8999999999876533222 23678999999999998888766
Q ss_pred ---------EEEeeCCCCCee--eEEeecceEeceEEEEECCCCcEEEEEcC-----CCeEEEEeCCC------ce-eee
Q psy15417 86 ---------CRLFDIRADQEL--AMYSHDNIICGITSVAFSRSGRLLLAGYD-----DFNCNVWDSMK------TE-RAG 142 (176)
Q Consensus 86 ---------i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~g~~-----d~~i~v~d~~~------~~-~~~ 142 (176)
|.+|++.+++.. ..+...........+.|+||+++++.... +..+++||+.. +. ...
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 999999776532 22222211122457899999998877653 56899999765 32 344
Q ss_pred eecCCCccEEEEEEeCCCCEEEEccCC----CcEEEeC
Q psy15417 143 ILAGHDNRVSCLGVTEDGMAVATGSWD----SFLRIWN 176 (176)
Q Consensus 143 ~~~~~~~~i~~~~~~~~~~~l~tg~~d----~~v~vwd 176 (176)
.+..+...+.. .|+++|..|+..+.+ ..|.+||
T Consensus 281 ~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d 317 (710)
T 2xdw_A 281 KLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINID 317 (710)
T ss_dssp EEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEE
T ss_pred EeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEe
Confidence 45555554443 477888776654442 2466653
No 181
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.40 E-value=6.8e-12 Score=102.15 Aligned_cols=155 Identities=9% Similarity=-0.031 Sum_probs=102.0
Q ss_pred CCccCeEEEEEcCCCCEEE-----EEeCCCeEEEEEcCCCeeeeEecCCCCCe--eEEEEccCCcEEEEeeCCCc-----
Q psy15417 18 GHTGDVMSLSLAPDMRTFV-----SGACDASAKLWDIRDGSCKQTFPGHESDI--NAVTFFPNGWAFATGSDDAT----- 85 (176)
Q Consensus 18 gh~~~V~~~~~~~~~~~l~-----s~s~dg~v~~wd~~~~~~~~~~~~h~~~v--~~v~~~~~~~~l~s~s~d~~----- 85 (176)
+|...+..++|||||++|+ .|+.+.+|++||+.+++... ..+-..+ .+++|+|+++.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence 5666789999999999988 55556789999999987541 1121222 67999999999999988776
Q ss_pred --------EEEeeCCCCCe--eeEEeecceEeceEEEEECCCCcEEEEEcCCC----eEEEEeCCCceeeeeecCCCccE
Q psy15417 86 --------CRLFDIRADQE--LAMYSHDNIICGITSVAFSRSGRLLLAGYDDF----NCNVWDSMKTERAGILAGHDNRV 151 (176)
Q Consensus 86 --------i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~----~i~v~d~~~~~~~~~~~~~~~~i 151 (176)
|++|++.+++. ...+........+..+.|+|+|++++....++ .+.+++...++. ..+..+...+
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~ 274 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGAK 274 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSCC
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCce
Confidence 99999987653 22333222212356789999999887766555 677776544433 3333344444
Q ss_pred EEEEEeCCCCEEEEccC---CCcEEEeC
Q psy15417 152 SCLGVTEDGMAVATGSW---DSFLRIWN 176 (176)
Q Consensus 152 ~~~~~~~~~~~l~tg~~---d~~v~vwd 176 (176)
....+ +++.+++.... ++.|.+||
T Consensus 275 ~~~~~-~~g~l~~~s~~~~~~~~l~~~d 301 (695)
T 2bkl_A 275 YEVHA-WKDRFYVLTDEGAPRQRVFEVD 301 (695)
T ss_dssp EEEEE-ETTEEEEEECTTCTTCEEEEEB
T ss_pred EEEEe-cCCcEEEEECCCCCCCEEEEEe
Confidence 44445 44544444432 46777764
No 182
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.40 E-value=4.3e-11 Score=87.27 Aligned_cols=150 Identities=9% Similarity=0.071 Sum_probs=115.3
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCC-CCeeEEEEccCCcEEEEeeC-CCcEEEeeCCCCCeee
Q psy15417 21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHE-SDINAVTFFPNGWAFATGSD-DATCRLFDIRADQELA 98 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~s~-d~~i~iwd~~~~~~~~ 98 (176)
..+.++.++|+|++++ +.++.|..||. +++.++.+..+. ..+.++.+.|+|+.+++.+. .+.+..+|. +++.+.
T Consensus 37 ~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~ 112 (276)
T 3no2_A 37 WECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLS 112 (276)
T ss_dssp CCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEE
T ss_pred CCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEE
Confidence 3577899999999888 34778999999 899999998753 57889999999999999887 667777775 555555
Q ss_pred EEeecce----EeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417 99 MYSHDNI----ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 174 (176)
Q Consensus 99 ~~~~~~~----~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v 174 (176)
.+..... ......+.+.+++.++++...++.+..||.. ++.+..+.... ....+.+.+++..+++++.+++|..
T Consensus 113 ~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~-~~~~~~~~~~g~~~v~~~~~~~v~~ 190 (276)
T 3no2_A 113 KTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSG-TPFSSAFLDNGDCLVACGDAHCFVQ 190 (276)
T ss_dssp EEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSS-CCCEEEECTTSCEEEECBTTSEEEE
T ss_pred EEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCC-CccceeEcCCCCEEEEeCCCCeEEE
Confidence 5443211 0122345678899999999999999999976 88888776543 3455678899999999988888887
Q ss_pred eC
Q psy15417 175 WN 176 (176)
Q Consensus 175 wd 176 (176)
||
T Consensus 191 ~d 192 (276)
T 3no2_A 191 LN 192 (276)
T ss_dssp EC
T ss_pred Ee
Confidence 75
No 183
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.38 E-value=3.1e-11 Score=89.75 Aligned_cols=145 Identities=11% Similarity=0.116 Sum_probs=95.4
Q ss_pred cCeEEEEEcCCCCEEEEEeCC---Ce--EEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCC------------
Q psy15417 21 GDVMSLSLAPDMRTFVSGACD---AS--AKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDD------------ 83 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~d---g~--v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d------------ 83 (176)
..+..+.|+|||+.|+..+.+ +. +.+||+.+++.......+ . +..+.|+|+++.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 457789999999988887754 33 778888888765544433 3 9999999999988877632
Q ss_pred ---------------CcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCC-------eEEEEeCCCceee
Q psy15417 84 ---------------ATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDF-------NCNVWDSMKTERA 141 (176)
Q Consensus 84 ---------------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~-------~i~v~d~~~~~~~ 141 (176)
..|.+||+.+++.+...... .+..+.|+|++ +++++..+. ...+|.+..++.
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~----~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~- 210 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP----RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE- 210 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTEEEEEEEEE----TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-
T ss_pred cceeecCcccccCccceEEEEECCCCeEEeeecCC----CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-
Confidence 46888998876552222221 46678999999 777765432 334443324433
Q ss_pred eeecCCCccEEEEEEeCCCCEEEEccCCC--------cEEEeC
Q psy15417 142 GILAGHDNRVSCLGVTEDGMAVATGSWDS--------FLRIWN 176 (176)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~~~~l~tg~~d~--------~v~vwd 176 (176)
..+..+ ..+.. ++|+|..|+.++.+. .|.+||
T Consensus 211 ~~l~~~-~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 211 EKMFEK-VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp EEEEEE-ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred EEeccC-cceee--ECCCCCEEEEEEccccCCccccceEEEEC
Confidence 223333 44444 389999887776543 566664
No 184
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.36 E-value=1e-10 Score=83.98 Aligned_cols=152 Identities=9% Similarity=0.039 Sum_probs=109.1
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecC-CCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeE
Q psy15417 21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG-HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAM 99 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~ 99 (176)
..+.++++++++.++++.. ++.|..||...... ..+.. ....+.++++.|+++.+++...++.|.+|+..+......
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~ 144 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL 144 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEee
Confidence 4577899999998666665 88999999876543 33332 235689999999999888877788999997654332211
Q ss_pred EeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 100 YSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 100 ~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
.... ...+..+++++++.++++...++.|.+||............+......+++.++|..+++...++.|.+||
T Consensus 145 -~~~~-~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~ 219 (270)
T 1rwi_B 145 -PFTG-LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLL 219 (270)
T ss_dssp -CCCS-CCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEEC
T ss_pred -cccc-CCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEc
Confidence 1111 12355788999999888887788999999766544333333335678899999998777777788898885
No 185
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.35 E-value=1.8e-10 Score=84.14 Aligned_cols=154 Identities=12% Similarity=0.044 Sum_probs=104.7
Q ss_pred CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCC----CCCeeEEEEccCCcEEEEeeC----------
Q psy15417 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGH----ESDINAVTFFPNGWAFATGSD---------- 82 (176)
Q Consensus 17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h----~~~v~~v~~~~~~~~l~s~s~---------- 82 (176)
..+...+.++.+++++.++++...++.|.+||..+++........ ...++.+++.|+|+.+++.+.
T Consensus 65 ~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~ 144 (296)
T 3e5z_A 65 MHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGY 144 (296)
T ss_dssp ESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSS
T ss_pred ECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccc
Confidence 345677899999999998888777789999999888754433221 234678999999998887321
Q ss_pred -------CCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCC-Ccee---eeeecCCCccE
Q psy15417 83 -------DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM-KTER---AGILAGHDNRV 151 (176)
Q Consensus 83 -------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~-~~~~---~~~~~~~~~~i 151 (176)
.+.|..++.. ++ ..... ......+.++|+|+++.+++...++.|.+|++. .++. ...+..+....
T Consensus 145 ~~~~~~~~~~l~~~~~~-g~-~~~~~--~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p 220 (296)
T 3e5z_A 145 GGEMELPGRWVFRLAPD-GT-LSAPI--RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKT 220 (296)
T ss_dssp CCCCCSSSCEEEEECTT-SC-EEEEE--CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCC
T ss_pred cccccCCCcEEEEECCC-CC-EEEee--cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCC
Confidence 2344445543 22 22211 111235679999999988888888999999975 3333 22222234455
Q ss_pred EEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 152 SCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 152 ~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
..+++.++|.++++. ++.|.+||
T Consensus 221 ~~i~~d~~G~l~v~~--~~~v~~~~ 243 (296)
T 3e5z_A 221 DGLRVDAGGLIWASA--GDGVHVLT 243 (296)
T ss_dssp CSEEEBTTSCEEEEE--TTEEEEEC
T ss_pred CeEEECCCCCEEEEc--CCeEEEEC
Confidence 678999999876665 77888886
No 186
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.35 E-value=1.2e-09 Score=79.22 Aligned_cols=157 Identities=8% Similarity=0.085 Sum_probs=113.8
Q ss_pred cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeee-EecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ-TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
++.+...+.++.+++++.++++...++.|..||.. ++... .+..+...+.++++.+++..+++...++.|..||.. +
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G 87 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence 44566789999999999988877768899999988 55332 223345678999999999988887778889999875 3
Q ss_pred CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeee-eecCCCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417 95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG-ILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~ 173 (176)
+ ...+........+..+.+++++.++++...++.+..||. .++... ........+..+++.+++..+++...++.|.
T Consensus 88 ~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 165 (299)
T 2z2n_A 88 I-IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIG 165 (299)
T ss_dssp C-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred c-EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEE
Confidence 2 222322111134678899999998888878889999997 443332 2233445678899999998887776677887
Q ss_pred EeC
Q psy15417 174 IWN 176 (176)
Q Consensus 174 vwd 176 (176)
.||
T Consensus 166 ~~~ 168 (299)
T 2z2n_A 166 RIT 168 (299)
T ss_dssp EEC
T ss_pred EEc
Confidence 775
No 187
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.35 E-value=1.1e-09 Score=81.06 Aligned_cols=155 Identities=12% Similarity=0.065 Sum_probs=106.0
Q ss_pred CCccCeEEEEEcCCCCEEEEEeCC----CeEEEEEcCCCeeeeEec--CCCCCeeEEEEccCCcEEEEeeC------CCc
Q psy15417 18 GHTGDVMSLSLAPDMRTFVSGACD----ASAKLWDIRDGSCKQTFP--GHESDINAVTFFPNGWAFATGSD------DAT 85 (176)
Q Consensus 18 gh~~~V~~~~~~~~~~~l~s~s~d----g~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~------d~~ 85 (176)
.+...+.++.++++++++++...+ +.|.+||.++++....+. .+...+++++++|+++.+++... .+.
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~ 163 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGG 163 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEE
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCce
Confidence 355779999999999988887766 689999998876543333 23457899999999988877654 244
Q ss_pred EEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEE-EEEcCCCeEEEEeCCC-ceeee--------eecCCCccEEEEE
Q psy15417 86 CRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMK-TERAG--------ILAGHDNRVSCLG 155 (176)
Q Consensus 86 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~g~~d~~i~v~d~~~-~~~~~--------~~~~~~~~i~~~~ 155 (176)
|..+|..+.+....... ...+..++|+|++..+ ++...++.|.+||... +.... ...++ .....++
T Consensus 164 l~~~~~~~~~~~~~~~~---~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~ 239 (333)
T 2dg1_A 164 VYYVSPDFRTVTPIIQN---ISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCC 239 (333)
T ss_dssp EEEECTTSCCEEEEEEE---ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEE
T ss_pred EEEEeCCCCEEEEeecC---CCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceE
Confidence 55556544333222111 1235678999999744 5556678999999753 22211 11222 3567899
Q ss_pred EeCCCCEEEEccCCCcEEEeC
Q psy15417 156 VTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 156 ~~~~~~~l~tg~~d~~v~vwd 176 (176)
+.++|.++++...++.|.+||
T Consensus 240 ~d~~G~l~v~~~~~~~v~~~d 260 (333)
T 2dg1_A 240 IDSDDNLYVAMYGQGRVLVFN 260 (333)
T ss_dssp EBTTCCEEEEEETTTEEEEEC
T ss_pred ECCCCCEEEEEcCCCEEEEEC
Confidence 999998887777778899886
No 188
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.33 E-value=1.2e-10 Score=86.58 Aligned_cols=140 Identities=14% Similarity=0.130 Sum_probs=97.3
Q ss_pred eEEEEEcCCCCEEEEEeCC---------------------------CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCc
Q psy15417 23 VMSLSLAPDMRTFVSGACD---------------------------ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW 75 (176)
Q Consensus 23 V~~~~~~~~~~~l~s~s~d---------------------------g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~ 75 (176)
+..+.|+||++.|+.++.+ ..+.+||+.+++....+.. . .+..+.|+|++
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg- 182 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK- 182 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-
Confidence 8899999999988887643 4688999998886455554 4 78899999999
Q ss_pred EEEEeeCCC-------cEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCC--------CeEEEEeCCCcee
Q psy15417 76 AFATGSDDA-------TCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD--------FNCNVWDSMKTER 140 (176)
Q Consensus 76 ~l~s~s~d~-------~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d--------~~i~v~d~~~~~~ 140 (176)
.++++..+. ...+|.+.+++....... ..+..+ +|+|+.++.++.+ ..+.+|| .++.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~----~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~ 254 (347)
T 2gop_A 183 IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK----VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEV 254 (347)
T ss_dssp EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE----ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCE
T ss_pred EEEEEecccccccccccccEEEeCCCceEEeccC----cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCce
Confidence 888876652 445555443332222221 233333 8999877665533 4688888 4554
Q ss_pred eeeecCCCccEEE-EEEeCCCCEEEEccCCCcEEEe
Q psy15417 141 AGILAGHDNRVSC-LGVTEDGMAVATGSWDSFLRIW 175 (176)
Q Consensus 141 ~~~~~~~~~~i~~-~~~~~~~~~l~tg~~d~~v~vw 175 (176)
......+...+.. +.|+ ++ .+++++.++.++||
T Consensus 255 ~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~ 288 (347)
T 2gop_A 255 MGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY 288 (347)
T ss_dssp EESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE
T ss_pred EeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE
Confidence 4444556667775 8899 88 88899999999987
No 189
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.30 E-value=3.5e-09 Score=76.70 Aligned_cols=154 Identities=11% Similarity=0.041 Sum_probs=111.0
Q ss_pred CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCee-eeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCee
Q psy15417 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC-KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL 97 (176)
Q Consensus 19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~-~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~ 97 (176)
+...+..+.+++++.++++...++.|..||.. ++. ...+......+.++++.|++..+++...++.+..||. ++...
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~ 132 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR 132 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE
Confidence 44678899999999988887778899999986 332 2222334457899999999988888777889999997 44332
Q ss_pred eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeee-ecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 98 AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI-LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 98 ~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
.+........+..+.+++++.++++...++.+..||. .++.... .......+..+++.+++..+++...++.|.+||
T Consensus 133 -~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 210 (299)
T 2z2n_A 133 -EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRIT 210 (299)
T ss_dssp -EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred -EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEEC
Confidence 2222211134678899999998888877889999997 5544332 333445678899999988777766677888775
No 190
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.29 E-value=1.9e-11 Score=92.14 Aligned_cols=149 Identities=10% Similarity=-0.062 Sum_probs=98.0
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeE-------------------EEEccCCcEEEEe-----
Q psy15417 25 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINA-------------------VTFFPNGWAFATG----- 80 (176)
Q Consensus 25 ~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~-------------------v~~~~~~~~l~s~----- 80 (176)
.+.|+||++.|+..+.++.+.+||+.+++....+..+...... +.++|+++.++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~ 164 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHT 164 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHT
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccC
Confidence 3779999999999999999999999988766655544432222 2345555544433
Q ss_pred eCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECC-CCcEEEEEcCC------CeEEEEeCCCceeeeeecCC-CccEE
Q psy15417 81 SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR-SGRLLLAGYDD------FNCNVWDSMKTERAGILAGH-DNRVS 152 (176)
Q Consensus 81 s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~g~~d------~~i~v~d~~~~~~~~~~~~~-~~~i~ 152 (176)
..+..|.+||+.+++........ ..+..+.|+| ++..++....+ ..+.+||...++........ ...+.
T Consensus 165 ~~~~~l~~~d~~~g~~~~~~~~~---~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~ 241 (396)
T 3c5m_A 165 NPTCRLIKVDIETGELEVIHQDT---AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCT 241 (396)
T ss_dssp CCCEEEEEEETTTCCEEEEEEES---SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEE
T ss_pred CCcceEEEEECCCCcEEeeccCC---cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCcccc
Confidence 35567899999876654443322 2466789999 77755554433 36888887654433222211 23577
Q ss_pred EEEEeCCCCEEEEccCC-----CcEEEeC
Q psy15417 153 CLGVTEDGMAVATGSWD-----SFLRIWN 176 (176)
Q Consensus 153 ~~~~~~~~~~l~tg~~d-----~~v~vwd 176 (176)
.++|+|+|..|+.++.+ +.|++||
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d 270 (396)
T 3c5m_A 242 HEFWIPDGSAMAYVSYFKGQTDRVIYKAN 270 (396)
T ss_dssp EEEECTTSSCEEEEEEETTTCCEEEEEEC
T ss_pred ceEECCCCCEEEEEecCCCCccceEEEEE
Confidence 88999999987766543 4488886
No 191
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.27 E-value=1.6e-10 Score=87.09 Aligned_cols=151 Identities=15% Similarity=0.040 Sum_probs=99.4
Q ss_pred CCccCeEEEEEcC-CCCEEEEEeCC------CeEEEEEcCCCeeeeEecCC--CCCeeEEEEccCCcEEEEeeCC-----
Q psy15417 18 GHTGDVMSLSLAP-DMRTFVSGACD------ASAKLWDIRDGSCKQTFPGH--ESDINAVTFFPNGWAFATGSDD----- 83 (176)
Q Consensus 18 gh~~~V~~~~~~~-~~~~l~s~s~d------g~v~~wd~~~~~~~~~~~~h--~~~v~~v~~~~~~~~l~s~s~d----- 83 (176)
.+...+..+.|+| ++..++..+.+ ..|.+||+..++.. .+..+ ...+..+.|+|+++.|+.++.+
T Consensus 185 ~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 263 (396)
T 3c5m_A 185 QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTD 263 (396)
T ss_dssp EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCC
T ss_pred cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCcc
Confidence 3556788899999 78766665543 35888888766533 33333 2357889999999877666544
Q ss_pred CcEEEeeCCCCCeeeEEeecceEeceEEEEECC-CCcEEEEEc----------------CCCeEEEEeCCCceeeeeecC
Q psy15417 84 ATCRLFDIRADQELAMYSHDNIICGITSVAFSR-SGRLLLAGY----------------DDFNCNVWDSMKTERAGILAG 146 (176)
Q Consensus 84 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~g~----------------~d~~i~v~d~~~~~~~~~~~~ 146 (176)
+.|.+||+.+++......... .. ..|+| +++.++.+. .+..+++||+..++.. .+..
T Consensus 264 ~~l~~~d~~~g~~~~l~~~~~----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~ 337 (396)
T 3c5m_A 264 RVIYKANPETLENEEVMVMPP----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCK 337 (396)
T ss_dssp EEEEEECTTTCCEEEEEECCS----EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEE
T ss_pred ceEEEEECCCCCeEEeeeCCC----CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccC
Confidence 349999998766543332222 22 78999 999877654 3468999998766542 2333
Q ss_pred CCc-----------cEEEEEEeCCCCEEEEccC-CCcEEEe
Q psy15417 147 HDN-----------RVSCLGVTEDGMAVATGSW-DSFLRIW 175 (176)
Q Consensus 147 ~~~-----------~i~~~~~~~~~~~l~tg~~-d~~v~vw 175 (176)
+.. ....++|+|+|..|+..+. ++...+|
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~ 378 (396)
T 3c5m_A 338 HSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIY 378 (396)
T ss_dssp CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEE
T ss_pred CCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEE
Confidence 333 1455789999988876654 5555555
No 192
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.25 E-value=2.3e-10 Score=86.34 Aligned_cols=132 Identities=11% Similarity=0.003 Sum_probs=90.5
Q ss_pred CCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee----------CCCcEEEeeCCCCCeeeEEeecce----
Q psy15417 40 CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS----------DDATCRLFDIRADQELAMYSHDNI---- 105 (176)
Q Consensus 40 ~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s----------~d~~i~iwd~~~~~~~~~~~~~~~---- 105 (176)
.|+.|.+||..+++.+.+++.+..+ .++|+|+++.+++++ .+++|.+||+.+.+.+........
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 3789999999999988888877655 899999999988886 367899999987776655443210
Q ss_pred EeceEEEEECCCCcEEEEEcC--CCeEEEEeCCCceeeee-ecCCCccEEEEEEeCCC-CEEEEccCCCcEEEe
Q psy15417 106 ICGITSVAFSRSGRLLLAGYD--DFNCNVWDSMKTERAGI-LAGHDNRVSCLGVTEDG-MAVATGSWDSFLRIW 175 (176)
Q Consensus 106 ~~~v~~~~~~~~~~~l~~g~~--d~~i~v~d~~~~~~~~~-~~~~~~~i~~~~~~~~~-~~l~tg~~d~~v~vw 175 (176)
......+.++|++++++++.. ++++.+||+.+.+.+.. +... .. ..+.+.|++ ..+++.+.|+.+.+|
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~-~~-~~v~~~p~~~~~~~~~~~dg~~~~v 178 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA-GC-WSVIPQPNRPRSFMTICGDGGLLTI 178 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT-TE-EEEEECTTSSSEEEEEETTSSEEEE
T ss_pred CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC-Cc-ceeEEcCCCCeeEEEECCCCcEEEE
Confidence 012345889999999988763 57899999998887776 4421 11 123344433 334444455554443
No 193
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.24 E-value=8.1e-10 Score=82.24 Aligned_cols=150 Identities=7% Similarity=-0.070 Sum_probs=104.5
Q ss_pred CeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCC----------CcEEEee
Q psy15417 22 DVMSLSLAPDMRTFVSGA-CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDD----------ATCRLFD 90 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s~s-~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d----------~~i~iwd 90 (176)
....+.+ .+++++++.. .++.|.++|.++++...++... .....+.++|+++.++++..+ +.|.++|
T Consensus 132 ~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id 209 (328)
T 3dsm_A 132 STEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRID 209 (328)
T ss_dssp BCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEE
T ss_pred CcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEE
Confidence 3445666 3444444443 4889999999999888877653 345789999999987777655 7899999
Q ss_pred CCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeee--ecCCCccEEEEEEeC-CCCEEEEc-
Q psy15417 91 IRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI--LAGHDNRVSCLGVTE-DGMAVATG- 166 (176)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~--~~~~~~~i~~~~~~~-~~~~l~tg- 166 (176)
..+.+.......... .....++++|++..+++... .+.+||..+++.... ..........++++| ++..+++.
T Consensus 210 ~~t~~v~~~~~~~~g-~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~ 286 (328)
T 3dsm_A 210 AETFTVEKQFKFKLG-DWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADA 286 (328)
T ss_dssp TTTTEEEEEEECCTT-CCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEEC
T ss_pred CCCCeEEEEEecCCC-CCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcc
Confidence 887765544433211 13567999999888877654 899999877664321 121235678899998 56666676
Q ss_pred ---cCCCcEEEeC
Q psy15417 167 ---SWDSFLRIWN 176 (176)
Q Consensus 167 ---~~d~~v~vwd 176 (176)
..++.|.+||
T Consensus 287 ~~y~~~~~V~v~d 299 (328)
T 3dsm_A 287 IDYQQQGIVYRYS 299 (328)
T ss_dssp TTSSSEEEEEEEC
T ss_pred cccccCCEEEEEC
Confidence 6788999986
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.24 E-value=1.9e-09 Score=80.20 Aligned_cols=150 Identities=6% Similarity=-0.059 Sum_probs=106.0
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCC-----CCeeEEEEccCCcEEEEee-CCCcEEEeeCCCC
Q psy15417 21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHE-----SDINAVTFFPNGWAFATGS-DDATCRLFDIRAD 94 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~-----~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~~ 94 (176)
.....++++++++.+++...++.|.+||..+++....+.... .....+++ .+++.+++.. .++.|.++|+.+.
T Consensus 84 ~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~ 162 (328)
T 3dsm_A 84 TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETD 162 (328)
T ss_dssp SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTT
T ss_pred CCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCC
Confidence 557789998888555555488999999999998877776433 14566777 4555555543 4889999999887
Q ss_pred CeeeEEeecceEeceEEEEECCCCcEEEEEcCC----------CeEEEEeCCCceeeeeecCC-CccEEEEEEeCCCCEE
Q psy15417 95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDD----------FNCNVWDSMKTERAGILAGH-DNRVSCLGVTEDGMAV 163 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d----------~~i~v~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l 163 (176)
+......... ....+.++|+++++++...+ +.+.++|..+++....+.-. ......++++|++..|
T Consensus 163 ~~~~~i~~g~---~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~l 239 (328)
T 3dsm_A 163 KVVDELTIGI---QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTL 239 (328)
T ss_dssp EEEEEEECSS---CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEE
T ss_pred eEEEEEEcCC---CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEE
Confidence 6655444322 23467889999988877655 78999998877766555422 2356889999988887
Q ss_pred EEccCCCcEEEeC
Q psy15417 164 ATGSWDSFLRIWN 176 (176)
Q Consensus 164 ~tg~~d~~v~vwd 176 (176)
..+.. .|.+||
T Consensus 240 yv~~~--~v~~~d 250 (328)
T 3dsm_A 240 YWINN--DIWRMP 250 (328)
T ss_dssp EEESS--SEEEEE
T ss_pred EEEcc--EEEEEE
Confidence 66543 677664
No 195
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.22 E-value=1.6e-08 Score=73.28 Aligned_cols=157 Identities=9% Similarity=0.025 Sum_probs=113.2
Q ss_pred cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeee-EecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ-TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
+......+.++.+++++.+.++...++.|..||.. ++... .+......+.++++.+++..+++...++.|..+|.. +
T Consensus 15 ~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 15 LSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence 34455678899999999988887778999999988 55433 233334678999999999888877777889999976 4
Q ss_pred CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeee-eecCCCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417 95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG-ILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~ 173 (176)
+. ..+........+..+++.+++.++++...++.+..+|.. ++... ...........+++.+++...++...++.|.
T Consensus 93 ~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 170 (300)
T 2qc5_A 93 GF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIG 170 (300)
T ss_dssp CE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred Ce-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEE
Confidence 33 233222111346788999999988888778899999976 44332 2333345678899999998777766677787
Q ss_pred EeC
Q psy15417 174 IWN 176 (176)
Q Consensus 174 vwd 176 (176)
.||
T Consensus 171 ~~~ 173 (300)
T 2qc5_A 171 RIT 173 (300)
T ss_dssp EEC
T ss_pred EEC
Confidence 764
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.22 E-value=2.2e-10 Score=93.88 Aligned_cols=156 Identities=12% Similarity=0.023 Sum_probs=99.2
Q ss_pred CCccCeEEEEEcCCCCEEEEEeCC-----CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCc-------
Q psy15417 18 GHTGDVMSLSLAPDMRTFVSGACD-----ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDAT------- 85 (176)
Q Consensus 18 gh~~~V~~~~~~~~~~~l~s~s~d-----g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~------- 85 (176)
+|...+..++|||||++|+.++.+ .+|++||+.+++..... .+...+..++|+|+ +.|+.++.+..
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC-------
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccc
Confidence 344467889999999988877654 46999999999865431 12222457899999 88888877654
Q ss_pred -------EEEeeCCCCCe--eeEEeecceEeceEEEEECCCCcEEEEEcCC-----CeEEEEeCCCc--eeeeeecCCCc
Q psy15417 86 -------CRLFDIRADQE--LAMYSHDNIICGITSVAFSRSGRLLLAGYDD-----FNCNVWDSMKT--ERAGILAGHDN 149 (176)
Q Consensus 86 -------i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d-----~~i~v~d~~~~--~~~~~~~~~~~ 149 (176)
|.+|++.+++. ...+........+..+.|+|||++++....+ ..+++||+..+ +....+..+..
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 317 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK 317 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS
T ss_pred cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC
Confidence 88899876552 2233322211125678999999987766543 37999998665 31334444444
Q ss_pred cEEEEEEeCCCCEEEEccCC----CcEEEeC
Q psy15417 150 RVSCLGVTEDGMAVATGSWD----SFLRIWN 176 (176)
Q Consensus 150 ~i~~~~~~~~~~~l~tg~~d----~~v~vwd 176 (176)
..... +.|++..|+..+.+ +.|.+||
T Consensus 318 ~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d 347 (741)
T 1yr2_A 318 AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVD 347 (741)
T ss_dssp SCEEE-EEEETTEEEEEECTTCTTCEEEEEE
T ss_pred ceEEE-EeccCCEEEEEECCCCCCCEEEEEe
Confidence 43333 34778877766553 3366653
No 197
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.22 E-value=2e-09 Score=78.75 Aligned_cols=154 Identities=10% Similarity=0.084 Sum_probs=104.9
Q ss_pred cCeEEEEEcCCCCEEEEEeCC---------------CeEEEEEcCCCeeeeEecCCCCCeeEEEEc----cCCcEE-EEe
Q psy15417 21 GDVMSLSLAPDMRTFVSGACD---------------ASAKLWDIRDGSCKQTFPGHESDINAVTFF----PNGWAF-ATG 80 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~d---------------g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~----~~~~~l-~s~ 80 (176)
..+.++.+++++.++++...+ +.|..||.. ++..... .+....+.++++ |+++.+ ++.
T Consensus 117 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 117 QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEE
T ss_pred cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEE
Confidence 457899999999888877655 567777765 5433322 233456889999 998655 444
Q ss_pred eCCCcEEEeeCC-CCCee--eEE-eecceE-eceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEE
Q psy15417 81 SDDATCRLFDIR-ADQEL--AMY-SHDNII-CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLG 155 (176)
Q Consensus 81 s~d~~i~iwd~~-~~~~~--~~~-~~~~~~-~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~ 155 (176)
..++.|.+|++. ++... ..+ ...... ..+..+++++++.++++...++.|.+||..+++....+..+...+.+++
T Consensus 195 ~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~ 274 (314)
T 1pjx_A 195 TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLH 274 (314)
T ss_dssp TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEE
T ss_pred CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEE
Confidence 567899999976 33211 111 111110 2356788999999988887888999999775666666666667789999
Q ss_pred EeCCCCEE-EEccCCCcEEEeC
Q psy15417 156 VTEDGMAV-ATGSWDSFLRIWN 176 (176)
Q Consensus 156 ~~~~~~~l-~tg~~d~~v~vwd 176 (176)
|++++..| ++...++.|..|+
T Consensus 275 ~~~dg~~l~v~~~~~~~l~~~~ 296 (314)
T 1pjx_A 275 FKPQTKTIFVTEHENNAVWKFE 296 (314)
T ss_dssp ECTTSSEEEEEETTTTEEEEEE
T ss_pred ECCCCCEEEEEeCCCCeEEEEe
Confidence 99999844 5555567777663
No 198
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.20 E-value=2.7e-08 Score=72.04 Aligned_cols=154 Identities=7% Similarity=-0.012 Sum_probs=109.8
Q ss_pred CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeee-EecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCee
Q psy15417 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ-TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL 97 (176)
Q Consensus 19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~ 97 (176)
....+.++.+++++.++++...++.|..+|.. ++... .+......+.++++.++++.+++...++.|..++. +++..
T Consensus 102 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~ 179 (300)
T 2qc5_A 102 PDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLE 179 (300)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred CCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEE
Confidence 34568899999999988887778899999987 55432 23334467899999999997777766788999987 44332
Q ss_pred eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeee-eecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 98 AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG-ILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 98 ~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
.+........+..+.+++++.++++....+.+.+++. .++... ....+...+..+++.++|...++...++.|..||
T Consensus 180 -~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 180 -EYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRIT 257 (300)
T ss_dssp -EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEC
T ss_pred -EeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEEC
Confidence 2322211134667899999988888777888999997 443322 2333456678899999988777766677887775
No 199
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.18 E-value=2.8e-09 Score=86.81 Aligned_cols=147 Identities=9% Similarity=-0.014 Sum_probs=99.5
Q ss_pred EEEEEcCCCCEEEEEeCCCe-------------EEEEEcCCCe----eeeEecCCCCCeeEEEEccCCcEEEEeeCCC--
Q psy15417 24 MSLSLAPDMRTFVSGACDAS-------------AKLWDIRDGS----CKQTFPGHESDINAVTFFPNGWAFATGSDDA-- 84 (176)
Q Consensus 24 ~~~~~~~~~~~l~s~s~dg~-------------v~~wd~~~~~----~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~-- 84 (176)
..++|+||++.|+.++.|.. |++|++.++. ++.....+...+.++.|+|+|++++.++.++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 57899999999999998876 9999998875 3333444556789999999999887777665
Q ss_pred --cEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEc---CCCeEEEEeCCCcee---eeeecCC-CccEEEEE
Q psy15417 85 --TCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY---DDFNCNVWDSMKTER---AGILAGH-DNRVSCLG 155 (176)
Q Consensus 85 --~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~---~d~~i~v~d~~~~~~---~~~~~~~-~~~i~~~~ 155 (176)
.+.+|+..+++......... ......+ +++.+++... .++.|.+||+..++. ......+ ...+..++
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~~---~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~ 326 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGVG---AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVS 326 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECSS---CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEE
T ss_pred ceEEEEEcCCCCceEEeecCCC---ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEE
Confidence 56666654443333322222 2233445 4566444443 257899999876542 2233333 44577788
Q ss_pred EeCCCCEEEEccCCCcEEEe
Q psy15417 156 VTEDGMAVATGSWDSFLRIW 175 (176)
Q Consensus 156 ~~~~~~~l~tg~~d~~v~vw 175 (176)
++ ++..+++...|+..+||
T Consensus 327 ~~-~~~lv~~~~~dg~~~l~ 345 (695)
T 2bkl_A 327 IV-GGHLSLEYLKDATSEVR 345 (695)
T ss_dssp EE-TTEEEEEEEETTEEEEE
T ss_pred EE-CCEEEEEEEECCEEEEE
Confidence 88 56788888999988887
No 200
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.16 E-value=1.4e-08 Score=81.03 Aligned_cols=153 Identities=8% Similarity=-0.031 Sum_probs=109.9
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcC--CCeeeeEecCCCCCeeEEEEc----cCCcEEEEeeC-CCcEEEeeCCCC
Q psy15417 22 DVMSLSLAPDMRTFVSGACDASAKLWDIR--DGSCKQTFPGHESDINAVTFF----PNGWAFATGSD-DATCRLFDIRAD 94 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~--~~~~~~~~~~h~~~v~~v~~~----~~~~~l~s~s~-d~~i~iwd~~~~ 94 (176)
.+..+.|+||++++++++.|+.|.+||+. +++.+.+++... ....++|+ |+|+++++++. ++++.++|..+.
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~ 276 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL 276 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCC
Confidence 45689999999999999999999999996 777777777533 46789999 69987776655 589999998887
Q ss_pred CeeeEEeecc---------eEeceEEEEECCCCcE-EEEEcCCCeEEEEeCCCcee--eeeecCCCccEEEEEEeCCCCE
Q psy15417 95 QELAMYSHDN---------IICGITSVAFSRSGRL-LLAGYDDFNCNVWDSMKTER--AGILAGHDNRVSCLGVTEDGMA 162 (176)
Q Consensus 95 ~~~~~~~~~~---------~~~~v~~~~~~~~~~~-l~~g~~d~~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~ 162 (176)
+.+....... ....+..+.+++++.. ++.-..++.+.++|....+. ...+ ........+.|+|++.+
T Consensus 277 ~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~ 355 (567)
T 1qks_A 277 EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRY 355 (567)
T ss_dssp CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCE
T ss_pred cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceECCCCCE
Confidence 7765544221 0124667778887654 45556778999999765432 2222 22344567889999998
Q ss_pred EEEcc-CCCcEEEeC
Q psy15417 163 VATGS-WDSFLRIWN 176 (176)
Q Consensus 163 l~tg~-~d~~v~vwd 176 (176)
++++. .++.|.++|
T Consensus 356 ~~va~~~sn~V~ViD 370 (567)
T 1qks_A 356 FITAANARNKLVVID 370 (567)
T ss_dssp EEEEEGGGTEEEEEE
T ss_pred EEEEeCCCCeEEEEE
Confidence 75544 566788875
No 201
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.14 E-value=1e-08 Score=83.70 Aligned_cols=156 Identities=12% Similarity=0.000 Sum_probs=105.3
Q ss_pred CccCeEEEEEcCCCCEEEEEeC-----CCeEEEEEcCC------Ce-eeeEecCCCCCeeEEEEccCCcEEEEeeCCC--
Q psy15417 19 HTGDVMSLSLAPDMRTFVSGAC-----DASAKLWDIRD------GS-CKQTFPGHESDINAVTFFPNGWAFATGSDDA-- 84 (176)
Q Consensus 19 h~~~V~~~~~~~~~~~l~s~s~-----dg~v~~wd~~~------~~-~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~-- 84 (176)
|...+..+.|+||+++|+..+. +..+.+||+.+ ++ ....+..+...+.. .|+|++..|+..+..+
T Consensus 231 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~ 309 (710)
T 2xdw_A 231 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSP 309 (710)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCT
T ss_pred CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCC
Confidence 4556788999999998887765 56799999986 43 35566666666655 4888887766555533
Q ss_pred --cEEEeeCCCCCe---eeEEeecceEeceEEEEECCCCcEEEEEcCCCe--EEEEeCCCceeeeeecCCCccEEEEEEe
Q psy15417 85 --TCRLFDIRADQE---LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFN--CNVWDSMKTERAGILAGHDNRVSCLGVT 157 (176)
Q Consensus 85 --~i~iwd~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~--i~v~d~~~~~~~~~~~~~~~~i~~~~~~ 157 (176)
.|.+||+.++.. ......... ..+..+.|++++.++++...++. +.+|++..++....+..+...+..++++
T Consensus 310 ~~~l~~~d~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s 388 (710)
T 2xdw_A 310 NYRLINIDFTDPEESKWKVLVPEHEK-DVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQ 388 (710)
T ss_dssp TCEEEEEETTSCCGGGCEEEECCCSS-CEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECC
T ss_pred CCEEEEEeCCCCCcccceeccCCCCC-CeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecC
Confidence 588899876531 222222211 23567788877888888888885 5566765666666666677778888999
Q ss_pred CCCCEEEEc----cCCCcEEEeC
Q psy15417 158 EDGMAVATG----SWDSFLRIWN 176 (176)
Q Consensus 158 ~~~~~l~tg----~~d~~v~vwd 176 (176)
|++..++.. ...+++.+||
T Consensus 389 ~d~~~l~~~~ss~~~P~~i~~~d 411 (710)
T 2xdw_A 389 KKDTEIFYQFTSFLSPGIIYHCD 411 (710)
T ss_dssp TTCSEEEEEEECSSCCCEEEEEE
T ss_pred CCCCEEEEEEeCCCCCCEEEEEE
Confidence 988765522 2345676664
No 202
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.12 E-value=1.3e-08 Score=81.22 Aligned_cols=143 Identities=13% Similarity=0.033 Sum_probs=103.9
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC--CCCeeeEEeecceEe
Q psy15417 30 PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR--ADQELAMYSHDNIIC 107 (176)
Q Consensus 30 ~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~--~~~~~~~~~~~~~~~ 107 (176)
+.+.++++...+++|.++|..+++.+.++... ..+..+.|+|+++++++++.|+.|.+||+. +.+.+.......
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~--- 240 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS--- 240 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS---
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC---
Confidence 44567788888999999999999988888743 356789999999999999999999999995 555554433322
Q ss_pred ceEEEEEC----CCCcEEEEEc-CCCeEEEEeCCCceeeeeecC----------CCc-cEEEEEEeCCCC-EEEEccCCC
Q psy15417 108 GITSVAFS----RSGRLLLAGY-DDFNCNVWDSMKTERAGILAG----------HDN-RVSCLGVTEDGM-AVATGSWDS 170 (176)
Q Consensus 108 ~v~~~~~~----~~~~~l~~g~-~d~~i~v~d~~~~~~~~~~~~----------~~~-~i~~~~~~~~~~-~l~tg~~d~ 170 (176)
....++|+ |+|++++++. .++++.++|..+.+.+..+.- |.. .+..+.+++++. +++....++
T Consensus 241 ~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g 320 (567)
T 1qks_A 241 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG 320 (567)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence 23468899 6998776654 558999999888877766542 112 566777777644 445555666
Q ss_pred cEEEeC
Q psy15417 171 FLRIWN 176 (176)
Q Consensus 171 ~v~vwd 176 (176)
.|.++|
T Consensus 321 ~v~~vd 326 (567)
T 1qks_A 321 KILLVD 326 (567)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 666543
No 203
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.11 E-value=1.2e-08 Score=75.01 Aligned_cols=155 Identities=8% Similarity=0.007 Sum_probs=103.8
Q ss_pred CCCccCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417 17 SGHTGDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95 (176)
Q Consensus 17 ~gh~~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 95 (176)
...........|+++++ ++++...++.|..|+. +++ ...+..+...++++++.++++++++...++.|..|+.. ++
T Consensus 41 ~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~ 117 (305)
T 3dr2_A 41 YDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ 117 (305)
T ss_dssp ECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred ecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC
Confidence 33445667889999988 6777778899999998 454 34555566778999999999977666666789999875 43
Q ss_pred eeeEEe-ecce-EeceEEEEECCCCcEEEE----EcC-------------CCeEEEEeCCCceeeeeecCCCccEEEEEE
Q psy15417 96 ELAMYS-HDNI-ICGITSVAFSRSGRLLLA----GYD-------------DFNCNVWDSMKTERAGILAGHDNRVSCLGV 156 (176)
Q Consensus 96 ~~~~~~-~~~~-~~~v~~~~~~~~~~~l~~----g~~-------------d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 156 (176)
...... .... ...++.+.++|+|.++++ |.. .+.+..+|..+++..... .......++|
T Consensus 118 ~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~ 195 (305)
T 3dr2_A 118 AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAF 195 (305)
T ss_dssp EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEE
T ss_pred EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEE
Confidence 322211 1111 123567899999998886 432 246777876555433322 3344577899
Q ss_pred eCCCCEEEEccCC------CcEEEeC
Q psy15417 157 TEDGMAVATGSWD------SFLRIWN 176 (176)
Q Consensus 157 ~~~~~~l~tg~~d------~~v~vwd 176 (176)
+|++..|..+... +.|.+||
T Consensus 196 spdg~~lyv~~~~~~~~~~~~i~~~~ 221 (305)
T 3dr2_A 196 SPDEQTLYVSQTPEQGHGSVEITAFA 221 (305)
T ss_dssp CTTSSEEEEEECCC---CCCEEEEEE
T ss_pred cCCCCEEEEEecCCcCCCCCEEEEEE
Confidence 9999876655444 5777764
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.11 E-value=1.3e-08 Score=78.14 Aligned_cols=153 Identities=11% Similarity=-0.000 Sum_probs=104.3
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCC--cEEEeeCCCCCeee
Q psy15417 21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA--TCRLFDIRADQELA 98 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~--~i~iwd~~~~~~~~ 98 (176)
.....++|++++.++++...++.|+.||..+++.......... .. ++|+|++..++.+..++ .|..++........
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 4677899999999888888889999999998876655554333 34 99999999888888766 68888876544332
Q ss_pred EEe-ecc-eEeceEEEEECC-CCcEEEEEcCCCeEEEEeCCCceeeee----ecCCCccE--EEEEEeCC-CCEEEEccC
Q psy15417 99 MYS-HDN-IICGITSVAFSR-SGRLLLAGYDDFNCNVWDSMKTERAGI----LAGHDNRV--SCLGVTED-GMAVATGSW 168 (176)
Q Consensus 99 ~~~-~~~-~~~~v~~~~~~~-~~~~l~~g~~d~~i~v~d~~~~~~~~~----~~~~~~~i--~~~~~~~~-~~~l~tg~~ 168 (176)
... ... ....+..++++| ++.+++ ...++.|+.||...+..... ..++...- ..++|+|+ +.++++-..
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 221 101 112356789999 555555 66788999999776543222 22222222 28999994 666677777
Q ss_pred CCcEEEeC
Q psy15417 169 DSFLRIWN 176 (176)
Q Consensus 169 d~~v~vwd 176 (176)
++.|+.|+
T Consensus 288 ~~~I~~~~ 295 (409)
T 3hrp_A 288 LSSVYKIT 295 (409)
T ss_dssp TTEEEEEC
T ss_pred CCEEEEEe
Confidence 88888875
No 205
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.11 E-value=4.8e-08 Score=71.36 Aligned_cols=152 Identities=13% Similarity=0.081 Sum_probs=100.7
Q ss_pred CccCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCeeeeE-ecC----CCCCeeEEEEccCCcEEEEeeCC---------
Q psy15417 19 HTGDVMSLSLAPD-MRTFVSGACDASAKLWDIRDGSCKQT-FPG----HESDINAVTFFPNGWAFATGSDD--------- 83 (176)
Q Consensus 19 h~~~V~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~~~~~~-~~~----h~~~v~~v~~~~~~~~l~s~s~d--------- 83 (176)
+...+.++.++++ +.++++.. ...|..||.+ ++.... ... ....+.++++.++++.+++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred CCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccc
Confidence 5567889999999 66555554 4478899988 664433 221 12358899999999888777654
Q ss_pred ------CcEEEeeCCCCCeeeEEeecceEeceEEEEEC----CCCcEE-EEEcCCCeEEEEeCC-Cce-----eeeeecC
Q psy15417 84 ------ATCRLFDIRADQELAMYSHDNIICGITSVAFS----RSGRLL-LAGYDDFNCNVWDSM-KTE-----RAGILAG 146 (176)
Q Consensus 84 ------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l-~~g~~d~~i~v~d~~-~~~-----~~~~~~~ 146 (176)
+.+..++.. ++........ .....++++ |++..+ ++...++.|.+||.. .++ ....+..
T Consensus 147 ~~~~~~~~l~~~~~~-g~~~~~~~~~---~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~ 222 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTD-GQMIQVDTAF---QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPG 222 (314)
T ss_dssp TTSSSCEEEEEECTT-SCEEEEEEEE---SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCC
T ss_pred cccCCCCeEEEECCC-CCEEEeccCC---CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCC
Confidence 456666654 3332222111 234678899 998654 555677899999865 232 2223333
Q ss_pred CC-ccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 147 HD-NRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 147 ~~-~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
+. .....+++.++|.++++...++.|.+||
T Consensus 223 ~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d 253 (314)
T 1pjx_A 223 THEGGADGMDFDEDNNLLVANWGSSHIEVFG 253 (314)
T ss_dssp CSSCEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred CCCCCCCceEECCCCCEEEEEcCCCEEEEEc
Confidence 43 5577899999998888877788898886
No 206
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.09 E-value=1.6e-11 Score=93.11 Aligned_cols=138 Identities=16% Similarity=0.103 Sum_probs=77.0
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceE
Q psy15417 31 DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGIT 110 (176)
Q Consensus 31 ~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~ 110 (176)
++..+++++.|+.|..||..+|+.++.++. .++.+..+.+++..+++++.|+.+..||.++++.+..+..... ..+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~-~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP-ELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHH-HHHT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCc-cccc
Confidence 567899999999999999999999998886 4566666667777888888999999999988776555433210 0000
Q ss_pred -EEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 111 -SVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 111 -~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
+..+. .+..+++|+.++.++.||..+++....+..+.. ..++|++..+++++.|+.++.||
T Consensus 85 ~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~----~~~~p~~~~v~~~~~dg~v~a~d 146 (369)
T 2hz6_A 85 ASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA----DSLSPSTSLLYLGRTEYTITMYD 146 (369)
T ss_dssp TCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCC
T ss_pred cCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc----ccccccCCEEEEEecCCEEEEEE
Confidence 00111 334567788889999999998888776654431 23556778888999999999886
No 207
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.06 E-value=6.3e-08 Score=73.46 Aligned_cols=150 Identities=13% Similarity=0.005 Sum_probs=103.0
Q ss_pred EEEEcCCCCEEEEEe----------CCCeEEEEEcCCCeeeeEecCC-------CCCeeEEEEccCCcEEEEeeC--CCc
Q psy15417 25 SLSLAPDMRTFVSGA----------CDASAKLWDIRDGSCKQTFPGH-------ESDINAVTFFPNGWAFATGSD--DAT 85 (176)
Q Consensus 25 ~~~~~~~~~~l~s~s----------~dg~v~~wd~~~~~~~~~~~~h-------~~~v~~v~~~~~~~~l~s~s~--d~~ 85 (176)
.+.|+||++.++.+. .++.|.+||..+.+.+.++... ......+.|+|+|++++.+.. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 789999999998886 3678999999988777666432 123457899999999988874 477
Q ss_pred EEEeeCCCCCeeeE-Eeecc---------------------------------------------------------e--
Q psy15417 86 CRLFDIRADQELAM-YSHDN---------------------------------------------------------I-- 105 (176)
Q Consensus 86 i~iwd~~~~~~~~~-~~~~~---------------------------------------------------------~-- 105 (176)
|.++| .+.+.+.. ..... .
T Consensus 150 v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 228 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIV 228 (373)
T ss_pred EEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEE
Confidence 99999 77654433 21100 0
Q ss_pred -------E------------------------------eceEEEEECCCCcEEEEEcC----------CCeEEEEeCCCc
Q psy15417 106 -------I------------------------------CGITSVAFSRSGRLLLAGYD----------DFNCNVWDSMKT 138 (176)
Q Consensus 106 -------~------------------------------~~v~~~~~~~~~~~l~~g~~----------d~~i~v~d~~~~ 138 (176)
. .+...+.++|++..+++... ++.+.++|..+.
T Consensus 229 ~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~ 308 (373)
T 2mad_H 229 WPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG 308 (373)
T ss_pred EEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC
Confidence 0 00011456666665555432 347889998888
Q ss_pred eeeeeecCCCccEEEEEEeCCCC-EEEEcc-CCCcEEEeC
Q psy15417 139 ERAGILAGHDNRVSCLGVTEDGM-AVATGS-WDSFLRIWN 176 (176)
Q Consensus 139 ~~~~~~~~~~~~i~~~~~~~~~~-~l~tg~-~d~~v~vwd 176 (176)
+.+..+... .....++|+|+|+ .++++. .++.|.+||
T Consensus 309 ~vv~~i~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD 347 (373)
T 2mad_H 309 QTSSQISLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYD 347 (373)
T ss_pred EEEEEEECC-CCcCeEEECCCCCeEEEEEcCCCCeEEEEE
Confidence 887777532 3467899999998 676766 488999886
No 208
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.04 E-value=1.3e-07 Score=69.23 Aligned_cols=153 Identities=10% Similarity=0.079 Sum_probs=98.7
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCC----CCCeeEEEEccCCcEEEEeeCC---------CcE
Q psy15417 20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGH----ESDINAVTFFPNGWAFATGSDD---------ATC 86 (176)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h----~~~v~~v~~~~~~~~l~s~s~d---------~~i 86 (176)
...+.++.+++++.++++ . +..|.+||.++++........ ...++.+++.|+|+.+++.... ..-
T Consensus 53 ~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~ 130 (297)
T 3g4e_A 53 DAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQG 130 (297)
T ss_dssp SSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCE
T ss_pred CCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCc
Confidence 467889999999995554 4 567999999888754333221 2347889999999877655322 234
Q ss_pred EEeeCCCCCeeeEEeecceEeceEEEEECCCCcEE-EEEcCCCeEEEEeC--CCcee-----eeeecCCCccEEEEEEeC
Q psy15417 87 RLFDIRADQELAMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDS--MKTER-----AGILAGHDNRVSCLGVTE 158 (176)
Q Consensus 87 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~g~~d~~i~v~d~--~~~~~-----~~~~~~~~~~i~~~~~~~ 158 (176)
.+|.+.......... ......+.++|+|+++.+ ++.+.++.|.+|+. ..+.. ...+..+......+++.+
T Consensus 131 ~l~~~d~~g~~~~~~--~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~ 208 (297)
T 3g4e_A 131 ALYSLFPDHHVKKYF--DQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA 208 (297)
T ss_dssp EEEEECTTSCEEEEE--EEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT
T ss_pred EEEEEECCCCEEEEe--eccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC
Confidence 555543322222111 111234679999999755 56667789999986 33332 222233334567889999
Q ss_pred CCCEEEEccCCCcEEEeC
Q psy15417 159 DGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 159 ~~~~l~tg~~d~~v~vwd 176 (176)
+|.+.++...++.|..||
T Consensus 209 ~G~lwva~~~~~~v~~~d 226 (297)
T 3g4e_A 209 EGKLWVACYNGGRVIRLD 226 (297)
T ss_dssp TSCEEEEEETTTEEEEEC
T ss_pred CCCEEEEEcCCCEEEEEc
Confidence 998877776777888885
No 209
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.03 E-value=8.7e-08 Score=73.51 Aligned_cols=154 Identities=7% Similarity=0.105 Sum_probs=105.4
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeE----ecCCCCC--eeEEEEcc-CCcEEEEeeCCCcEEEeeCC
Q psy15417 20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT----FPGHESD--INAVTFFP-NGWAFATGSDDATCRLFDIR 92 (176)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~----~~~h~~~--v~~v~~~~-~~~~l~s~s~d~~i~iwd~~ 92 (176)
...+.+++++|+...|+.+..++.|..||..++..... ..++... .+.++|+| ++..+++-...+.|+.|+..
T Consensus 218 ~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~ 297 (409)
T 3hrp_A 218 SGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPD 297 (409)
T ss_dssp CSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred cCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecC
Confidence 35567899999555555577788999999987753322 2222222 23999999 47777777778899999875
Q ss_pred CCCeeeEEeec------------ceEeceEEEEECCCCcEEEEEc-CCCeEEEEeCCCceeeeeecCC------------
Q psy15417 93 ADQELAMYSHD------------NIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMKTERAGILAGH------------ 147 (176)
Q Consensus 93 ~~~~~~~~~~~------------~~~~~v~~~~~~~~~~~l~~g~-~d~~i~v~d~~~~~~~~~~~~~------------ 147 (176)
.. ........ ........++++|++.++++-. .+++|+.|+...++. ..+.++
T Consensus 298 g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g~~~ 375 (409)
T 3hrp_A 298 GE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQIDGTPL 375 (409)
T ss_dssp CC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCBSTT
T ss_pred CC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCCChh
Confidence 43 22221211 0012356799999999888888 899999999766653 333332
Q ss_pred ---CccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417 148 ---DNRVSCLGVTEDGMAVATGSWDSFLRIW 175 (176)
Q Consensus 148 ---~~~i~~~~~~~~~~~l~tg~~d~~v~vw 175 (176)
......+++.+++.++++-..+++|+.+
T Consensus 376 ~~~~~~P~giavd~~g~lyVad~~n~~Ir~i 406 (409)
T 3hrp_A 376 EATFNYPYDICYDGEGGYWIAEAWGKAIRKY 406 (409)
T ss_dssp TCCBSSEEEEEECSSSEEEEEESTTCEEEEE
T ss_pred ceEeCCceEEEEcCCCCEEEEECCCCeEEEE
Confidence 2457889999998888888888888765
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.03 E-value=4.7e-08 Score=71.52 Aligned_cols=143 Identities=12% Similarity=0.072 Sum_probs=95.5
Q ss_pred cCeEEEEEcCCCCEEEEEeCC---------CeEEEEEcCC-CeeeeEecCCCCCeeEEEEccCCcEE-EEeeCCCcEEEe
Q psy15417 21 GDVMSLSLAPDMRTFVSGACD---------ASAKLWDIRD-GSCKQTFPGHESDINAVTFFPNGWAF-ATGSDDATCRLF 89 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~d---------g~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~d~~i~iw 89 (176)
..++.+.++|+|+++++.... ..-.+|.+.. ++.. .+..+-...+.++|+|+++.+ ++.+.++.|..|
T Consensus 98 ~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~ 176 (297)
T 3g4e_A 98 NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVK-KYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAF 176 (297)
T ss_dssp EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEE-EEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEE
T ss_pred CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEE-EEeeccccccceEEcCCCCEEEEecCCCCcEEEE
Confidence 457889999999977654322 2335555542 3322 222233456899999999765 555667889999
Q ss_pred eCC--CCCee--eEE-eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEe-CCCCEE
Q psy15417 90 DIR--ADQEL--AMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVT-EDGMAV 163 (176)
Q Consensus 90 d~~--~~~~~--~~~-~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l 163 (176)
++. ++... ..+ ...........++++++|.+.++...++.|..||..+++.+..+..+...+.+++|. |++..|
T Consensus 177 ~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L 256 (297)
T 3g4e_A 177 DYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEM 256 (297)
T ss_dssp EECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEE
T ss_pred eccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEE
Confidence 873 33321 111 111111234578899999988888888899999987788888877776788999998 776654
Q ss_pred E
Q psy15417 164 A 164 (176)
Q Consensus 164 ~ 164 (176)
.
T Consensus 257 ~ 257 (297)
T 3g4e_A 257 Y 257 (297)
T ss_dssp E
T ss_pred E
Confidence 3
No 211
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.99 E-value=2.8e-08 Score=75.53 Aligned_cols=117 Identities=16% Similarity=-0.004 Sum_probs=89.1
Q ss_pred EEcCCCCEEEEEeC-----CCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee----------CCCcEEEeeC
Q psy15417 27 SLAPDMRTFVSGAC-----DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS----------DDATCRLFDI 91 (176)
Q Consensus 27 ~~~~~~~~l~s~s~-----dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s----------~d~~i~iwd~ 91 (176)
...|++..++.... ++.|.++|..+++.+.+++.-..+ .+.++|++++++.++ .++.|.+||.
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 34688888877765 578999999999998888755555 499999999887765 3678999999
Q ss_pred CCCCeeeEEeecc-e----EeceEEEEECCCCcEEEEEcC--CCeEEEEeCCCceeeeeec
Q psy15417 92 RADQELAMYSHDN-I----ICGITSVAFSRSGRLLLAGYD--DFNCNVWDSMKTERAGILA 145 (176)
Q Consensus 92 ~~~~~~~~~~~~~-~----~~~v~~~~~~~~~~~l~~g~~--d~~i~v~d~~~~~~~~~~~ 145 (176)
.+.+.+....... . ......+.|+|||++++++.. ++.+.++|..+.+...++.
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~ 177 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD 177 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEE
Confidence 9887766554321 0 001235889999998887764 6889999999998877764
No 212
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.98 E-value=1.4e-08 Score=75.85 Aligned_cols=159 Identities=9% Similarity=0.055 Sum_probs=104.1
Q ss_pred CCccCeEEEEEcCCCCEEEEEeC-----CCeEEEEEcCCCeeeeEecCC------CCCeeEEEEccC-CcEEEEee---C
Q psy15417 18 GHTGDVMSLSLAPDMRTFVSGAC-----DASAKLWDIRDGSCKQTFPGH------ESDINAVTFFPN-GWAFATGS---D 82 (176)
Q Consensus 18 gh~~~V~~~~~~~~~~~l~s~s~-----dg~v~~wd~~~~~~~~~~~~h------~~~v~~v~~~~~-~~~l~s~s---~ 82 (176)
+|...+..++++++++++++-.. ++.|.+||+++++.+..+..+ ...++.+++.|+ +..+++-. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 46678999999999886665543 578999999999877666432 235689999975 55566655 6
Q ss_pred CCcEEEeeCCCCCeeeEEee-------------cce--------------EeceEEEEECCCCcEEEEEcCCC-eEEEEe
Q psy15417 83 DATCRLFDIRADQELAMYSH-------------DNI--------------ICGITSVAFSRSGRLLLAGYDDF-NCNVWD 134 (176)
Q Consensus 83 d~~i~iwd~~~~~~~~~~~~-------------~~~--------------~~~v~~~~~~~~~~~l~~g~~d~-~i~v~d 134 (176)
++.|.+||+.+++....... ... ...++.++++|+++.|+.+...+ .+..++
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 78999999876554332210 000 02357899999998777765554 454444
Q ss_pred CC---Cc-----eeee--eecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 135 SM---KT-----ERAG--ILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 135 ~~---~~-----~~~~--~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
.. .. +... ...++......+++.++|.++++...++.|.+||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d 275 (343)
T 2qe8_A 224 SADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVIT 275 (343)
T ss_dssp HHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEE
T ss_pred HHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEE
Confidence 21 10 0000 1112222344578999999988888888999885
No 213
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.97 E-value=7.4e-08 Score=71.97 Aligned_cols=149 Identities=13% Similarity=0.046 Sum_probs=98.7
Q ss_pred cCeEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCeeeeEec-------CCCCCeeEEEEccCCcEEEEeeC-----CCcE
Q psy15417 21 GDVMSLSLAPDMRTFVSGAC--DASAKLWDIRDGSCKQTFP-------GHESDINAVTFFPNGWAFATGSD-----DATC 86 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~--dg~v~~wd~~~~~~~~~~~-------~h~~~v~~v~~~~~~~~l~s~s~-----d~~i 86 (176)
..+..++++++++++++... ++.+.||.+.+++.. .++ ++-..+.++++.++++++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 57889999999999988642 343455555456533 332 24467899999999986665433 5789
Q ss_pred EEeeCCCCCeeeEEeecce----EeceEEEEECCC-CcEEEEEc---CCCeEEEEeCCCceeeeeecCCC----------
Q psy15417 87 RLFDIRADQELAMYSHDNI----ICGITSVAFSRS-GRLLLAGY---DDFNCNVWDSMKTERAGILAGHD---------- 148 (176)
Q Consensus 87 ~iwd~~~~~~~~~~~~~~~----~~~v~~~~~~~~-~~~l~~g~---~d~~i~v~d~~~~~~~~~~~~~~---------- 148 (176)
.+||+.+++.+..+..... ...++.++++++ +..+++-. .++.|.+||..+++....+.+|.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 9999988775555443211 123467889875 55556655 67889999987665544443210
Q ss_pred -------------------ccEEEEEEeCCCCEEEEccCCC
Q psy15417 149 -------------------NRVSCLGVTEDGMAVATGSWDS 170 (176)
Q Consensus 149 -------------------~~i~~~~~~~~~~~l~tg~~d~ 170 (176)
.....++++|++..|..+..++
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~ 216 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS 216 (343)
T ss_dssp ETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC
T ss_pred ECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC
Confidence 1257799999998777665554
No 214
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.96 E-value=2e-08 Score=81.86 Aligned_cols=143 Identities=16% Similarity=0.153 Sum_probs=90.4
Q ss_pred CCccCeEEEEEcCCCCEEE-----EEeCCCeEEEEEcCCCeeeeE-ecCCCCCeeEEEEccCCcEEEEeeCCC-------
Q psy15417 18 GHTGDVMSLSLAPDMRTFV-----SGACDASAKLWDIRDGSCKQT-FPGHESDINAVTFFPNGWAFATGSDDA------- 84 (176)
Q Consensus 18 gh~~~V~~~~~~~~~~~l~-----s~s~dg~v~~wd~~~~~~~~~-~~~h~~~v~~v~~~~~~~~l~s~s~d~------- 84 (176)
+|...+..++||||+++++ .|+.+.+|++||+.+++.+.. +.. ....+++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCccccccc
Confidence 4566788899999999887 344346799999999985543 221 113567899 999888888774
Q ss_pred ------cEEEeeCCCCCe--eeEEeecc-eEeceEEEEECCCCcEEEEEc----CCCeEEEEeCCCce-eeeeecCCCcc
Q psy15417 85 ------TCRLFDIRADQE--LAMYSHDN-IICGITSVAFSRSGRLLLAGY----DDFNCNVWDSMKTE-RAGILAGHDNR 150 (176)
Q Consensus 85 ------~i~iwd~~~~~~--~~~~~~~~-~~~~v~~~~~~~~~~~l~~g~----~d~~i~v~d~~~~~-~~~~~~~~~~~ 150 (176)
.|.+|++.+++. ...+.... .......+.++||+++++... ....++++|+.... ....+..+...
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~ 282 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA 282 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc
Confidence 389999876543 23333322 112245688999999775432 23589999976652 23344444444
Q ss_pred EEEEEEeCCCCEEE
Q psy15417 151 VSCLGVTEDGMAVA 164 (176)
Q Consensus 151 i~~~~~~~~~~~l~ 164 (176)
.... +++++..|+
T Consensus 283 ~~~~-~~~~g~~l~ 295 (693)
T 3iuj_A 283 DVSL-VDNKGSTLY 295 (693)
T ss_dssp CEEE-EEEETTEEE
T ss_pred eEEE-EeccCCEEE
Confidence 3333 455554443
No 215
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.93 E-value=1.1e-06 Score=65.24 Aligned_cols=152 Identities=11% Similarity=-0.012 Sum_probs=95.6
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecC---C-CCCeeEEEEccCCcEEEEeeCC----CcEEEeeC
Q psy15417 20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG---H-ESDINAVTFFPNGWAFATGSDD----ATCRLFDI 91 (176)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~---h-~~~v~~v~~~~~~~~l~s~s~d----~~i~iwd~ 91 (176)
...+.++.++++++++++. .+ .+.+||.++++....... . ...+++++++|+|+.+++...+ +...+|.+
T Consensus 89 ~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~ 166 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHV 166 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEE
T ss_pred CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEE
Confidence 3578899999998877764 34 499999988875432221 1 2358899999999877665421 23344443
Q ss_pred CCCCeeeEEeecceEeceEEEEECCCCcEE-EEEcCCCeEEEEeCC--Cc-e-----eeeeecCCCccEEEEEEeCCCCE
Q psy15417 92 RADQELAMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDSM--KT-E-----RAGILAGHDNRVSCLGVTEDGMA 162 (176)
Q Consensus 92 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~g~~d~~i~v~d~~--~~-~-----~~~~~~~~~~~i~~~~~~~~~~~ 162 (176)
.+++ ...... .....+.++|+|+++.+ ++...++.|.+|+.. .+ + ....+.........+++.++|.+
T Consensus 167 ~~g~-~~~~~~--~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~l 243 (326)
T 2ghs_A 167 AKGK-VTKLFA--DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHI 243 (326)
T ss_dssp ETTE-EEEEEE--EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCE
T ss_pred eCCc-EEEeeC--CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCE
Confidence 3332 222111 11235678999999755 555667899999975 44 2 12222223345677889999887
Q ss_pred EEEccCCCcEEEeC
Q psy15417 163 VATGSWDSFLRIWN 176 (176)
Q Consensus 163 l~tg~~d~~v~vwd 176 (176)
.++...++.|..||
T Consensus 244 wva~~~~~~v~~~d 257 (326)
T 2ghs_A 244 WNARWGEGAVDRYD 257 (326)
T ss_dssp EEEEETTTEEEEEC
T ss_pred EEEEeCCCEEEEEC
Confidence 76665567788775
No 216
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.90 E-value=1.2e-07 Score=77.71 Aligned_cols=146 Identities=9% Similarity=0.037 Sum_probs=95.7
Q ss_pred EEEEEcCCCCEEEEEeCCCe--------------EEEEEcCCCee--eeEec--CCCCCeeEEEEccCCcEEEEeeCCC-
Q psy15417 24 MSLSLAPDMRTFVSGACDAS--------------AKLWDIRDGSC--KQTFP--GHESDINAVTFFPNGWAFATGSDDA- 84 (176)
Q Consensus 24 ~~~~~~~~~~~l~s~s~dg~--------------v~~wd~~~~~~--~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~- 84 (176)
..++|+|| +.|+.++.++. |++|++.++.. ...+. .+...+.++.|+|+|++++..+.++
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~ 290 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT 290 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC
Confidence 57889999 98888877654 88999977652 22233 3334588999999998877776543
Q ss_pred ----cEEEeeCCCC--C-eeeEEeecceEeceEEEEECCCCcEEEEEcC----CCeEEEEeCCCc--eeeeeecCCCccE
Q psy15417 85 ----TCRLFDIRAD--Q-ELAMYSHDNIICGITSVAFSRSGRLLLAGYD----DFNCNVWDSMKT--ERAGILAGHDNRV 151 (176)
Q Consensus 85 ----~i~iwd~~~~--~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~----d~~i~v~d~~~~--~~~~~~~~~~~~i 151 (176)
.|.+||+.++ + ......... ..... +.|++..++..+. ++.+.+||+... +....+..+...+
T Consensus 291 ~~~~~l~~~d~~~~~~~~~~~l~~~~~---~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l 366 (741)
T 1yr2_A 291 DPVNTVHVARVTNGKIGPVTALIPDLK---AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNL 366 (741)
T ss_dssp CSCCEEEEEEEETTEECCCEEEECSSS---SCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEE
T ss_pred CCcceEEEEECCCCCCcccEEecCCCC---ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeE
Confidence 7899998765 3 222222221 12222 2377777666554 456999998763 3333444455556
Q ss_pred EEEEEeCCCCEEEEccCCCcEEEe
Q psy15417 152 SCLGVTEDGMAVATGSWDSFLRIW 175 (176)
Q Consensus 152 ~~~~~~~~~~~l~tg~~d~~v~vw 175 (176)
..+++. ++..+++...|+..+||
T Consensus 367 ~~~~~~-~~~lv~~~~~dg~~~l~ 389 (741)
T 1yr2_A 367 ESVGIA-GNRLFASYIHDAKSQVL 389 (741)
T ss_dssp EEEEEE-BTEEEEEEEETTEEEEE
T ss_pred EEEEEE-CCEEEEEEEECCEEEEE
Confidence 677777 55677888889888877
No 217
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.89 E-value=4.6e-07 Score=68.67 Aligned_cols=141 Identities=13% Similarity=-0.123 Sum_probs=93.9
Q ss_pred EcCCCCEEEEEeC--CC---eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee----------CCCcEEEeeCC
Q psy15417 28 LAPDMRTFVSGAC--DA---SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS----------DDATCRLFDIR 92 (176)
Q Consensus 28 ~~~~~~~l~s~s~--dg---~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s----------~d~~i~iwd~~ 92 (176)
..|+++.++.... .. +|.++|..+++.+.+++....+ .++++|+++.++.+. .++.|.++|..
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence 3467777777653 22 8899999999988888754444 999999999888875 36789999998
Q ss_pred CCCeeeEEeec--ce---EeceEEEEECCCCcEEEEEcC--CCeEEEEeCCCceeeee-ecCCCccEEEEEEeCCC-CEE
Q psy15417 93 ADQELAMYSHD--NI---ICGITSVAFSRSGRLLLAGYD--DFNCNVWDSMKTERAGI-LAGHDNRVSCLGVTEDG-MAV 163 (176)
Q Consensus 93 ~~~~~~~~~~~--~~---~~~v~~~~~~~~~~~l~~g~~--d~~i~v~d~~~~~~~~~-~~~~~~~i~~~~~~~~~-~~l 163 (176)
+.+.+...... .. ......+.++|++++++++.. +..+.++| .+++.... +... .. +.+.|++ ..+
T Consensus 106 t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~~---~~~~~~~~~~~ 180 (373)
T 2mad_H 106 TFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-TC---YHIHPGAPSTF 180 (373)
T ss_pred CCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-ce---EEEEeCCCceE
Confidence 77665544332 00 011236889999999888764 47899999 88887766 5421 11 2233333 233
Q ss_pred EEccCCCcEEEe
Q psy15417 164 ATGSWDSFLRIW 175 (176)
Q Consensus 164 ~tg~~d~~v~vw 175 (176)
++.+.|+.+.++
T Consensus 181 ~~~~~dg~~~~v 192 (373)
T 2mad_H 181 YLLCAQGGLAKT 192 (373)
T ss_pred EEEcCCCCEEEE
Confidence 444455555544
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.89 E-value=6.1e-07 Score=66.56 Aligned_cols=141 Identities=11% Similarity=0.129 Sum_probs=92.9
Q ss_pred cCeEEEEEcCCCCEEEEEeC------CCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEE-EEeeCCCcEEEeeCC-
Q psy15417 21 GDVMSLSLAPDMRTFVSGAC------DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF-ATGSDDATCRLFDIR- 92 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~------dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~d~~i~iwd~~- 92 (176)
..++.+.++|+++++++... .+.|..++ +++... +..+....++++|+|+++.+ ++.+.++.|.+|++.
T Consensus 134 ~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~ 210 (326)
T 2ghs_A 134 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDA 210 (326)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCT
T ss_pred CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEccc
Confidence 46889999999997765542 23455555 555332 32233457899999999765 444557889999975
Q ss_pred -CC-Ce--eeEE-eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEe-CCCCEEEE
Q psy15417 93 -AD-QE--LAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVT-EDGMAVAT 165 (176)
Q Consensus 93 -~~-~~--~~~~-~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~t 165 (176)
++ .. ...+ ...........+.+.+++.+.++...++.+.+||. .++....+..+...+.+++|. +++..|..
T Consensus 211 ~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~v 288 (326)
T 2ghs_A 211 RTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLV 288 (326)
T ss_dssp TTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEE
T ss_pred ccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEE
Confidence 43 21 1112 11111122456889999998888777788999996 566666666666678999998 88766543
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.77 E-value=3.6e-07 Score=66.98 Aligned_cols=146 Identities=13% Similarity=0.065 Sum_probs=95.4
Q ss_pred CeEEEEEcCCCCEEEE----EeC-------------CCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCC-
Q psy15417 22 DVMSLSLAPDMRTFVS----GAC-------------DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDD- 83 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s----~s~-------------dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d- 83 (176)
.++.+.++++|.+.++ |.. .+.|..+|..+++..... .....+.++|+|+++.++.+...
T Consensus 132 ~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~ 209 (305)
T 3dr2_A 132 SPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPE 209 (305)
T ss_dssp CCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC
T ss_pred CCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCC
Confidence 3567899999998887 432 245777887777644332 33457889999999877776655
Q ss_pred -----CcEEEeeCCCCCeeeEEe-e-cceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEE
Q psy15417 84 -----ATCRLFDIRADQELAMYS-H-DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGV 156 (176)
Q Consensus 84 -----~~i~iwd~~~~~~~~~~~-~-~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 156 (176)
+.|..|++..+. +.... + .........+.++++|.+.++. .+ .|.+|+. .++.+..+..+. .+..++|
T Consensus 210 ~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~-~g~~~~~~~~~~-~~~~~~f 284 (305)
T 3dr2_A 210 QGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDS-DGQLLGHIPTPG-TASNCTF 284 (305)
T ss_dssp ---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEEEECT-TSCEEEEEECSS-CCCEEEE
T ss_pred cCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEEEECC-CCCEEEEEECCC-ceeEEEE
Confidence 689999986543 21111 1 0000112357788999965554 44 5999996 566666555444 4778899
Q ss_pred eCCCCEEEEccCCCcEEE
Q psy15417 157 TEDGMAVATGSWDSFLRI 174 (176)
Q Consensus 157 ~~~~~~l~tg~~d~~v~v 174 (176)
.++++.|..++.++-.++
T Consensus 285 ~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 285 DQAQQRLFITGGPCLWML 302 (305)
T ss_dssp CTTSCEEEEEETTEEEEE
T ss_pred eCCCCEEEEEcCCeEEEE
Confidence 999888877777665554
No 220
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.74 E-value=2e-10 Score=87.01 Aligned_cols=144 Identities=13% Similarity=0.103 Sum_probs=71.9
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCC-CeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeec
Q psy15417 25 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHES-DINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD 103 (176)
Q Consensus 25 ~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~-~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~ 103 (176)
+..+..++..+++++.|+.+..||.++++.+..++.+.. .+.+.-....+..+++++.|+.+..||.++++.+..+...
T Consensus 42 s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~ 121 (369)
T 2hz6_A 42 QVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSA 121 (369)
T ss_dssp CCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC-----------
T ss_pred ecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCC
Confidence 333445677888888999999999999988777654421 1110000113446788888999999999988775444332
Q ss_pred ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCC---CEEEEccCCCcEEEeC
Q psy15417 104 NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG---MAVATGSWDSFLRIWN 176 (176)
Q Consensus 104 ~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~tg~~d~~v~vwd 176 (176)
. ...++|++..+++++.++.++.||..+++....+..+. ....++.++. ..++.++.|+.++.||
T Consensus 122 ~------~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d 189 (369)
T 2hz6_A 122 F------ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVD 189 (369)
T ss_dssp -----------------EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEEC
T ss_pred C------cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEE
Confidence 1 13345677888888899999999988887655543211 1122233321 4556777888888876
No 221
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.70 E-value=2.5e-07 Score=70.02 Aligned_cols=151 Identities=12% Similarity=-0.004 Sum_probs=101.4
Q ss_pred EEEEcCCCCEEEEEe----------CCCeEEEEEcCCCeeeeEecCC-------CCCeeEEEEccCCcEEEEeeC--CCc
Q psy15417 25 SLSLAPDMRTFVSGA----------CDASAKLWDIRDGSCKQTFPGH-------ESDINAVTFFPNGWAFATGSD--DAT 85 (176)
Q Consensus 25 ~~~~~~~~~~l~s~s----------~dg~v~~wd~~~~~~~~~~~~h-------~~~v~~v~~~~~~~~l~s~s~--d~~ 85 (176)
.+.|+||++.++.+. .++.|.+||..+++.+.++..+ ......++|+|+|++++.+.. +..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 699999999888886 3678999999999988887643 123567999999998888864 356
Q ss_pred EEE--eeCCCCCee-------------------------eEEeecc----------------------------------
Q psy15417 86 CRL--FDIRADQEL-------------------------AMYSHDN---------------------------------- 104 (176)
Q Consensus 86 i~i--wd~~~~~~~-------------------------~~~~~~~---------------------------------- 104 (176)
+.+ +|+.+-..+ .......
T Consensus 149 v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~v 228 (368)
T 1mda_H 149 AGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWA 228 (368)
T ss_dssp EEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEEC
T ss_pred EEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEE
Confidence 888 876320000 0000000
Q ss_pred ---eE------------------------------eceEEEEECCCCcEEEEEcC---------CCeEEEEeCCCceeee
Q psy15417 105 ---II------------------------------CGITSVAFSRSGRLLLAGYD---------DFNCNVWDSMKTERAG 142 (176)
Q Consensus 105 ---~~------------------------------~~v~~~~~~~~~~~l~~g~~---------d~~i~v~d~~~~~~~~ 142 (176)
.. .+...+.++|++..++.+.. +....++|..+.+.+.
T Consensus 229 s~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~ 308 (368)
T 1mda_H 229 VASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSG 308 (368)
T ss_dssp BSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEE
T ss_pred cCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEE
Confidence 00 00011568888876665432 2356699999888887
Q ss_pred eecCCCccEEEEEEeCCCC-EEEEcc-CCCcEEEeC
Q psy15417 143 ILAGHDNRVSCLGVTEDGM-AVATGS-WDSFLRIWN 176 (176)
Q Consensus 143 ~~~~~~~~i~~~~~~~~~~-~l~tg~-~d~~v~vwd 176 (176)
.+.... ....++|+|+++ .+++.. .++.|.++|
T Consensus 309 ~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID 343 (368)
T 1mda_H 309 PISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYD 343 (368)
T ss_dssp CCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred EEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEE
Confidence 775433 467899999987 456666 589999886
No 222
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.67 E-value=2.2e-06 Score=66.07 Aligned_cols=140 Identities=16% Similarity=-0.041 Sum_probs=94.6
Q ss_pred CCCCEEEEEeCC-----CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee----------CCCcEEEeeCCCC
Q psy15417 30 PDMRTFVSGACD-----ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS----------DDATCRLFDIRAD 94 (176)
Q Consensus 30 ~~~~~l~s~s~d-----g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s----------~d~~i~iwd~~~~ 94 (176)
+++..++..... +.|.++|..+++.+.+++.-..+ .+.++|+++.++.+. .++.|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 455655555442 68999999999999888765555 899999999887775 4678999999988
Q ss_pred CeeeEEeec--ce---EeceEEEEECCCCcEEEEEcC--CCeEEEEeCCCceeeeeecCCCc-------cEEEEEEeCCC
Q psy15417 95 QELAMYSHD--NI---ICGITSVAFSRSGRLLLAGYD--DFNCNVWDSMKTERAGILAGHDN-------RVSCLGVTEDG 160 (176)
Q Consensus 95 ~~~~~~~~~--~~---~~~v~~~~~~~~~~~l~~g~~--d~~i~v~d~~~~~~~~~~~~~~~-------~i~~~~~~~~~ 160 (176)
+.+...... .. ......+.|+||+++++++.. ++.+.+.|..+.+....+.-... .-.-++++++|
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG 239 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDG 239 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTS
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCC
Confidence 776555432 00 011224789999998888764 57899999998887776653111 01124566666
Q ss_pred CEEEEccCCCc
Q psy15417 161 MAVATGSWDSF 171 (176)
Q Consensus 161 ~~l~tg~~d~~ 171 (176)
..++....+++
T Consensus 240 ~~~~V~~~~~~ 250 (426)
T 3c75_H 240 SLARVDFADGE 250 (426)
T ss_dssp SEEEEECCTTC
T ss_pred CEEEEECCCCc
Confidence 65544334443
No 223
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.67 E-value=1.9e-06 Score=70.29 Aligned_cols=151 Identities=13% Similarity=0.111 Sum_probs=103.9
Q ss_pred EEEEcCCCCEEEEEeCCCe-------------------EEEEEcCCCeeeeEecC--CC-------CCeeEEEEccCCc-
Q psy15417 25 SLSLAPDMRTFVSGACDAS-------------------AKLWDIRDGSCKQTFPG--HE-------SDINAVTFFPNGW- 75 (176)
Q Consensus 25 ~~~~~~~~~~l~s~s~dg~-------------------v~~wd~~~~~~~~~~~~--h~-------~~v~~v~~~~~~~- 75 (176)
.+.++|+..+++.++.++. |..||.++|+.+..++. |. .++.-.....+|+
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~ 318 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP 318 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence 5788898899999988864 99999999999988865 21 1222223333554
Q ss_pred --EEEEeeCCCcEEEeeCCCCCeeeEEeecce--Eec-----------------------------------eEEEEECC
Q psy15417 76 --AFATGSDDATCRLFDIRADQELAMYSHDNI--ICG-----------------------------------ITSVAFSR 116 (176)
Q Consensus 76 --~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~--~~~-----------------------------------v~~~~~~~ 116 (176)
.++.++.+|.+.++|.++++.+........ ... -..++++|
T Consensus 319 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp 398 (689)
T 1yiq_A 319 RKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP 398 (689)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET
T ss_pred EEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC
Confidence 788999999999999998887643322110 000 01257788
Q ss_pred CCcEEEEEcC---------------------------------------------CCeEEEEeCCCceeeeeecCCCccE
Q psy15417 117 SGRLLLAGYD---------------------------------------------DFNCNVWDSMKTERAGILAGHDNRV 151 (176)
Q Consensus 117 ~~~~l~~g~~---------------------------------------------d~~i~v~d~~~~~~~~~~~~~~~~i 151 (176)
+..++++... ++.++.||+.+++.......+...
T Consensus 399 ~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~- 477 (689)
T 1yiq_A 399 DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIF- 477 (689)
T ss_dssp TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSC-
T ss_pred CCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCc-
Confidence 7766665421 377999999999888777654322
Q ss_pred EEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 152 SCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 152 ~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
....+...+..++.|+.|+.++.||
T Consensus 478 ~~g~~~tagglvf~gt~dg~l~a~D 502 (689)
T 1yiq_A 478 NGGTLSTAGNLVFEGSADGRVIAYA 502 (689)
T ss_dssp CCCEEEETTTEEEEECTTSEEEEEE
T ss_pred cCccceECCCEEEEECCCCcEEEEE
Confidence 2234555677888999999999986
No 224
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.65 E-value=9.8e-07 Score=67.09 Aligned_cols=146 Identities=8% Similarity=-0.033 Sum_probs=90.1
Q ss_pred EEEEcCCCCEEEEEe----------CCCeEEEEEcCCCeeeeEecCCC-------CCeeEEEEccCCcEEEEeeC--CCc
Q psy15417 25 SLSLAPDMRTFVSGA----------CDASAKLWDIRDGSCKQTFPGHE-------SDINAVTFFPNGWAFATGSD--DAT 85 (176)
Q Consensus 25 ~~~~~~~~~~l~s~s----------~dg~v~~wd~~~~~~~~~~~~h~-------~~v~~v~~~~~~~~l~s~s~--d~~ 85 (176)
.+.++||++.++.++ .++.|.+||..+.+.+.++.-.. .....+.|+|+|++++.+.. ++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 389999999887776 35679999999998887775321 24567999999998888764 689
Q ss_pred EEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC-ceeeeeecCC----CccE-EEEEEe-C
Q psy15417 86 CRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK-TERAGILAGH----DNRV-SCLGVT-E 158 (176)
Q Consensus 86 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~-~~~~~~~~~~----~~~i-~~~~~~-~ 158 (176)
|.++|+.+.+.+........ ...+....+.+++.+.||++.+.++.. ++.......+ ...+ ...+|. +
T Consensus 162 VsVID~~t~~vv~tI~v~g~-----~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 236 (386)
T 3sjl_D 162 VGVVDLEGKAFKRMLDVPDC-----YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQK 236 (386)
T ss_dssp EEEEETTTTEEEEEEECCSE-----EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETT
T ss_pred EEEEECCCCcEEEEEECCCc-----ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcC
Confidence 99999998877766554331 111211234455556667766666654 3321111111 1111 113454 5
Q ss_pred CCCEEEEccCCCcEEEeC
Q psy15417 159 DGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 159 ~~~~l~tg~~d~~v~vwd 176 (176)
+|.++. .+.+++|.+.|
T Consensus 237 dG~~~~-vs~~g~V~v~d 253 (386)
T 3sjl_D 237 AGRLVW-PTYTGKIHQID 253 (386)
T ss_dssp TTEEEE-EBTTSEEEEEE
T ss_pred CCcEEE-EeCCCEEEEEE
Confidence 564443 34467777654
No 225
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.58 E-value=1.8e-05 Score=57.18 Aligned_cols=148 Identities=13% Similarity=0.050 Sum_probs=95.1
Q ss_pred CeEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCeeeeEecCCCC-CeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417 22 DVMSLSLAPDMRTFVSGAC--DASAKLWDIRDGSCKQTFPGHES-DINAVTFFPNGWAFATGSDDATCRLFDIRADQELA 98 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s~s~--dg~v~~wd~~~~~~~~~~~~h~~-~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~ 98 (176)
....+.|++++.++++.+. +..|.++|..+++.+..+.-... -...+++.. +..+++.-.++.+.++|..+.+.+.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETTTTEEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECCCCcEEE
Confidence 3578999998655554443 57899999999998887753221 223455542 3444444557899999998887776
Q ss_pred EEeec-ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCC-----ccEEEEEEeCCCCEEEEccCCCcE
Q psy15417 99 MYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHD-----NRVSCLGVTEDGMAVATGSWDSFL 172 (176)
Q Consensus 99 ~~~~~-~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~tg~~d~~v 172 (176)
.++.. .. + ..+.+++..++++..++++.++|..+.+....+.--. ...+.+.|. ++..++....++.|
T Consensus 101 ~i~~g~~~--g---~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V 174 (266)
T 2iwa_A 101 NFTHQMKD--G---WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCI 174 (266)
T ss_dssp EEECCSSS--C---CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEE
T ss_pred EEECCCCC--e---EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeE
Confidence 66544 21 2 2344577666666678899999988877666554211 135677777 56555555556666
Q ss_pred EEeC
Q psy15417 173 RIWN 176 (176)
Q Consensus 173 ~vwd 176 (176)
.+.|
T Consensus 175 ~vID 178 (266)
T 2iwa_A 175 ARIS 178 (266)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6543
No 226
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.58 E-value=1.2e-05 Score=58.16 Aligned_cols=146 Identities=9% Similarity=0.012 Sum_probs=98.4
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecc
Q psy15417 25 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDN 104 (176)
Q Consensus 25 ~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~ 104 (176)
.+++.. +.+.++.-.++.+.++|.++.+.+.+++.... ....+.+++..++.+..++++.+.|..+.+.........
T Consensus 70 Gi~~~g-~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~ 146 (266)
T 2iwa_A 70 GLTLLN-EKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKY 146 (266)
T ss_dssp EEEEET-TEEEEEETTCSEEEEEETTTTEEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred EEEEeC-CEEEEEEecCCEEEEEECCCCcEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECC
Confidence 344442 34445555678899999999998888864311 124466677766666678899999998876655443221
Q ss_pred ---eEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC-------------CccEEEEEEeCCCC-EEEEcc
Q psy15417 105 ---IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH-------------DNRVSCLGVTEDGM-AVATGS 167 (176)
Q Consensus 105 ---~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~-------------~~~i~~~~~~~~~~-~l~tg~ 167 (176)
....++.+.+. ++..++....+..|.+.|..+++.+..+.-. ....+.++|+|+++ .++++.
T Consensus 147 ~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk 225 (266)
T 2iwa_A 147 NGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK 225 (266)
T ss_dssp TTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET
T ss_pred CCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC
Confidence 11235567777 7777777777889999999998877766421 12458899999875 456776
Q ss_pred CCCcEEE
Q psy15417 168 WDSFLRI 174 (176)
Q Consensus 168 ~d~~v~v 174 (176)
....+.+
T Consensus 226 ~~~~v~~ 232 (266)
T 2iwa_A 226 LWPKLFE 232 (266)
T ss_dssp TCSEEEE
T ss_pred CCCeEEE
Confidence 6666654
No 227
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.57 E-value=5.5e-06 Score=63.97 Aligned_cols=151 Identities=7% Similarity=0.056 Sum_probs=96.5
Q ss_pred EEEEcCCCCEEEEEeCC------CeEEEEEcCCCeeeeEecCCCC---CeeEEEEccCCcEEEEee--------------
Q psy15417 25 SLSLAPDMRTFVSGACD------ASAKLWDIRDGSCKQTFPGHES---DINAVTFFPNGWAFATGS-------------- 81 (176)
Q Consensus 25 ~~~~~~~~~~l~s~s~d------g~v~~wd~~~~~~~~~~~~h~~---~v~~v~~~~~~~~l~s~s-------------- 81 (176)
.+...|++ +++++..+ +.+.++|.++.+.+.++..... --..+-|+|+++.++++.
T Consensus 142 ~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~ 220 (462)
T 2ece_A 142 TVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLE 220 (462)
T ss_dssp EEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTT
T ss_pred ceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchh
Confidence 34567888 77777666 7899999999998888863222 123577899999998885
Q ss_pred -----CCCcEEEeeCCCCCeeeEEeecceEeceEEEE--ECCCCcEEEEEc------CCCeEEEEeCCCce--eeee--e
Q psy15417 82 -----DDATCRLFDIRADQELAMYSHDNIICGITSVA--FSRSGRLLLAGY------DDFNCNVWDSMKTE--RAGI--L 144 (176)
Q Consensus 82 -----~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~g~------~d~~i~v~d~~~~~--~~~~--~ 144 (176)
.+.+|.+||+.+.+.+.............-+. |+|++++++++. .++++.+|....++ .... +
T Consensus 221 ~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi 300 (462)
T 2ece_A 221 HLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEI 300 (462)
T ss_dssp THHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEE
T ss_pred hhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeC
Confidence 36899999998765555544421111222344 499999887766 45577665432221 1111 0
Q ss_pred cCC----------------CccEEEEEEeCCCCEEEEccC-CCcEEEeC
Q psy15417 145 AGH----------------DNRVSCLGVTEDGMAVATGSW-DSFLRIWN 176 (176)
Q Consensus 145 ~~~----------------~~~i~~~~~~~~~~~l~tg~~-d~~v~vwd 176 (176)
... ......+.++++|++|..+.+ .+.|.+||
T Consensus 301 ~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~Vavfd 349 (462)
T 2ece_A 301 PAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYD 349 (462)
T ss_dssp CCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEE
T ss_pred CCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 100 133567889999998865544 55788774
No 228
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.56 E-value=2.2e-06 Score=69.85 Aligned_cols=151 Identities=14% Similarity=0.132 Sum_probs=104.5
Q ss_pred EEEEcCCCCEEEEEeCCC-------------------eEEEEEcCCCeeeeEecC--CC-------CCeeEEEEccCC--
Q psy15417 25 SLSLAPDMRTFVSGACDA-------------------SAKLWDIRDGSCKQTFPG--HE-------SDINAVTFFPNG-- 74 (176)
Q Consensus 25 ~~~~~~~~~~l~s~s~dg-------------------~v~~wd~~~~~~~~~~~~--h~-------~~v~~v~~~~~~-- 74 (176)
.+.+++++.+++.++.++ .|..+|.++|+.+..++. |. ....-+....+|
T Consensus 247 ~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~ 326 (677)
T 1kb0_A 247 SMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKP 326 (677)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcE
Confidence 577889888888888764 499999999999888764 21 122223334467
Q ss_pred -cEEEEeeCCCcEEEeeCCCCCeeeEEeecce--E------ec-e------------------------EEEEECCCCcE
Q psy15417 75 -WAFATGSDDATCRLFDIRADQELAMYSHDNI--I------CG-I------------------------TSVAFSRSGRL 120 (176)
Q Consensus 75 -~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~--~------~~-v------------------------~~~~~~~~~~~ 120 (176)
..++.++.+|.+.++|.++++.+........ . +. + ..++++|+..+
T Consensus 327 ~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~ 406 (677)
T 1kb0_A 327 RKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGL 406 (677)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTE
T ss_pred eeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCE
Confidence 6799999999999999999887654432210 0 00 0 14578888777
Q ss_pred EEEEcC-------------------------------------------CCeEEEEeCCCceeeeeecCCCccEEEEEEe
Q psy15417 121 LLAGYD-------------------------------------------DFNCNVWDSMKTERAGILAGHDNRVSCLGVT 157 (176)
Q Consensus 121 l~~g~~-------------------------------------------d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~ 157 (176)
+++... .+.+..||+.+++........ ..+....+.
T Consensus 407 ~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~ 485 (677)
T 1kb0_A 407 VYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-SPWNGGTLT 485 (677)
T ss_dssp EEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES-SSCCCCEEE
T ss_pred EEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC-CCCcCcceE
Confidence 766432 267999999999887776532 223334455
Q ss_pred CCCCEEEEccCCCcEEEeC
Q psy15417 158 EDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 158 ~~~~~l~tg~~d~~v~vwd 176 (176)
..+..++.++.|+.+++||
T Consensus 486 ~~g~~v~~g~~dg~l~a~D 504 (677)
T 1kb0_A 486 TAGNVVFQGTADGRLVAYH 504 (677)
T ss_dssp ETTTEEEEECTTSEEEEEE
T ss_pred eCCCEEEEECCCCcEEEEE
Confidence 6677888889999999986
No 229
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.56 E-value=6.9e-05 Score=53.63 Aligned_cols=154 Identities=8% Similarity=0.014 Sum_probs=93.5
Q ss_pred cCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417 21 GDVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIRADQELA 98 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~~ 98 (176)
..+..++|++++..| ++-..++.|..++.+.......+...-....++++.|+ +..+++-...+.|.++++.......
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 346789999866544 45555788999999766543333332346789999986 4555666667789999886433222
Q ss_pred EEeecceEeceEEEEECCC-CcEEEEEcC--CCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCcEEE
Q psy15417 99 MYSHDNIICGITSVAFSRS-GRLLLAGYD--DFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSFLRI 174 (176)
Q Consensus 99 ~~~~~~~~~~v~~~~~~~~-~~~l~~g~~--d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~v~v 174 (176)
..... ......++++|+ +.++++-.. .+.|..++...................+++++++..| ++-...+.|.+
T Consensus 116 ~~~~~--~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~ 193 (267)
T 1npe_A 116 LFDTG--LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAEC 193 (267)
T ss_dssp EECSS--CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEECC--CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEE
Confidence 22111 123467899996 455555433 4688888754322211111222456788999976544 55556667776
Q ss_pred eC
Q psy15417 175 WN 176 (176)
Q Consensus 175 wd 176 (176)
+|
T Consensus 194 ~~ 195 (267)
T 1npe_A 194 LN 195 (267)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 230
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.51 E-value=2.3e-06 Score=65.98 Aligned_cols=78 Identities=9% Similarity=-0.079 Sum_probs=61.4
Q ss_pred EEEEcCCCCEEEEEe----------CCCeEEEEEcCCCeeeeEecCC-------CCCeeEEEEccCCcEEEEeeC--CCc
Q psy15417 25 SLSLAPDMRTFVSGA----------CDASAKLWDIRDGSCKQTFPGH-------ESDINAVTFFPNGWAFATGSD--DAT 85 (176)
Q Consensus 25 ~~~~~~~~~~l~s~s----------~dg~v~~wd~~~~~~~~~~~~h-------~~~v~~v~~~~~~~~l~s~s~--d~~ 85 (176)
.+.++||++.++.+. .++.|.++|..+++.+.++.-. ......+.|+|++++++.+.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 789999999888876 3678999999999888776421 123567899999999988875 578
Q ss_pred EEEeeCCCCCeeeEEee
Q psy15417 86 CRLFDIRADQELAMYSH 102 (176)
Q Consensus 86 i~iwd~~~~~~~~~~~~ 102 (176)
|.+.|+.+.+.+.....
T Consensus 202 VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp EEEEETTTTEEEEEEEC
T ss_pred EEEEECCCCeEEEEEEc
Confidence 99999998877665544
No 231
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.48 E-value=5.9e-05 Score=54.20 Aligned_cols=146 Identities=10% Similarity=0.003 Sum_probs=95.6
Q ss_pred eEEEEEcCCCCEEEEEeCCC--eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee-CCCcEEEeeCCCCCeeeE
Q psy15417 23 VMSLSLAPDMRTFVSGACDA--SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS-DDATCRLFDIRADQELAM 99 (176)
Q Consensus 23 V~~~~~~~~~~~l~s~s~dg--~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~~~~~~~ 99 (176)
.-.+.|+ ++.++.+.+.+| .|+.+|+++++.+..+.... ......+.+++..++... .++.+.++|..+.+.+..
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~t 122 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRS 122 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEE
Confidence 4678888 666677777666 79999999999888876543 343333333444444444 578899999998888877
Q ss_pred EeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC--C---ccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417 100 YSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH--D---NRVSCLGVTEDGMAVATGSWDSFLRI 174 (176)
Q Consensus 100 ~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~--~---~~i~~~~~~~~~~~l~tg~~d~~v~v 174 (176)
++....-. .+.+++..|+....+.++.++|..+.+....+.-. . ..++.+.+. +|...+..-.+..|.+
T Consensus 123 i~~~~eG~-----glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~v 196 (262)
T 3nol_A 123 FNYDGEGW-----GLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVR 196 (262)
T ss_dssp EECSSCCC-----CEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEE
T ss_pred EECCCCce-----EEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEE
Confidence 76644211 22246676666666788999998887776665431 1 234556676 5655555545666665
Q ss_pred eC
Q psy15417 175 WN 176 (176)
Q Consensus 175 wd 176 (176)
.|
T Consensus 197 ID 198 (262)
T 3nol_A 197 ID 198 (262)
T ss_dssp EC
T ss_pred EE
Confidence 54
No 232
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.47 E-value=2.2e-05 Score=56.55 Aligned_cols=144 Identities=8% Similarity=-0.067 Sum_probs=94.9
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCee--EEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE
Q psy15417 23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDIN--AVTFFPNGWAFATGSDDATCRLFDIRADQELAMY 100 (176)
Q Consensus 23 V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~--~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 100 (176)
.-.+.|+ ++.++.+.+.+|.|+.+|+++++.+..+ -. .... ++++.. ++.++..-.++.+.++|..+.+.+..+
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEE
Confidence 4577887 4567778888889999999999887776 22 2333 355543 234444456789999999988888777
Q ss_pred eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC--CC---ccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417 101 SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG--HD---NRVSCLGVTEDGMAVATGSWDSFLRIW 175 (176)
Q Consensus 101 ~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~--~~---~~i~~~~~~~~~~~l~tg~~d~~v~vw 175 (176)
.....-.. + .+++..|+....+++++++|.++.+....+.- +. ..++.+.+. +|...+..-.+..|.+.
T Consensus 133 ~~~~eGwG---L--t~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vI 206 (268)
T 3nok_A 133 RYSGEGWG---L--CYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEI 206 (268)
T ss_dssp ECSSCCCC---E--EEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEE
T ss_pred eCCCceeE---E--ecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEE
Confidence 65443222 2 24677777777788999999888777665542 11 134566676 55555555455566654
Q ss_pred C
Q psy15417 176 N 176 (176)
Q Consensus 176 d 176 (176)
|
T Consensus 207 D 207 (268)
T 3nok_A 207 D 207 (268)
T ss_dssp C
T ss_pred e
Confidence 4
No 233
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.46 E-value=1.7e-05 Score=63.17 Aligned_cols=150 Identities=13% Similarity=0.007 Sum_probs=103.0
Q ss_pred CeEEEEE-c-CCCCEEEEEe------------------CCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee
Q psy15417 22 DVMSLSL-A-PDMRTFVSGA------------------CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS 81 (176)
Q Consensus 22 ~V~~~~~-~-~~~~~l~s~s------------------~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s 81 (176)
....+++ + |++.+++.++ .++.+-++|.++.+...++.--. ....++++|+|+++++.+
T Consensus 135 ~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~ 213 (595)
T 1fwx_A 135 GIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTS 213 (595)
T ss_dssp SEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEE
T ss_pred CCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEe
Confidence 3567887 5 8999888884 34678899999998888776322 457788999999988887
Q ss_pred CCC--------------------------------------cEEEeeCCC--CCe-eeEEeecceEeceEEEEECCCCcE
Q psy15417 82 DDA--------------------------------------TCRLFDIRA--DQE-LAMYSHDNIICGITSVAFSRSGRL 120 (176)
Q Consensus 82 ~d~--------------------------------------~i~iwd~~~--~~~-~~~~~~~~~~~~v~~~~~~~~~~~ 120 (176)
.+. .+.+.|.++ +.. +...+... ....+.++|||++
T Consensus 214 ~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~---~PhGv~~sPDGk~ 290 (595)
T 1fwx_A 214 YNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIAN---NPHGCNMAPDKKH 290 (595)
T ss_dssp SCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEES---SCCCEEECTTSSE
T ss_pred cCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCC---CceEEEEcCCCCE
Confidence 553 355556554 222 22222211 2346889999986
Q ss_pred EE-EEcCCCeEEEEeCCCce------------eeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 121 LL-AGYDDFNCNVWDSMKTE------------RAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 121 l~-~g~~d~~i~v~d~~~~~------------~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
++ ++..+.++.++|..+.+ ...... -...-..++|+++|....+...|++|.+||
T Consensus 291 v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kwd 358 (595)
T 1fwx_A 291 LCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWN 358 (595)
T ss_dssp EEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECCCCeEEEEEecCCcEEEEE
Confidence 64 45577899999987542 222322 223457789999995566788899999996
No 234
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.44 E-value=1.1e-05 Score=65.80 Aligned_cols=151 Identities=14% Similarity=0.064 Sum_probs=88.7
Q ss_pred CccCeEEEEEcCCCCEEEEEeC----CCeEEEEEcCCCe-eeeEecCCCCCeeEEEEccCCc-EEEEeeCC---CcEEEe
Q psy15417 19 HTGDVMSLSLAPDMRTFVSGAC----DASAKLWDIRDGS-CKQTFPGHESDINAVTFFPNGW-AFATGSDD---ATCRLF 89 (176)
Q Consensus 19 h~~~V~~~~~~~~~~~l~s~s~----dg~v~~wd~~~~~-~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d---~~i~iw 89 (176)
|...+..+.|+||+++++.... +..+.++|+.++. ....+..+....... +++++. .++....+ +.|..+
T Consensus 232 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~ 310 (693)
T 3iuj_A 232 QHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTV 310 (693)
T ss_dssp GCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEE
T ss_pred CCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEE
Confidence 3445778999999997754332 2478999998763 345566566555555 555554 45555444 468888
Q ss_pred eCCCCCe--eeE-EeecceEeceEEEEECCCCcEEEEEc-CCC--eEEEEeCCCceeeeeec-CCCccEEEEEEeCCCCE
Q psy15417 90 DIRADQE--LAM-YSHDNIICGITSVAFSRSGRLLLAGY-DDF--NCNVWDSMKTERAGILA-GHDNRVSCLGVTEDGMA 162 (176)
Q Consensus 90 d~~~~~~--~~~-~~~~~~~~~v~~~~~~~~~~~l~~g~-~d~--~i~v~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~ 162 (176)
++.++.. +.. ..... .+. .|++++..|+... .++ .+++|++..+.. ..+. .....+..+++++++..
T Consensus 311 d~~~~~~~~~~~l~~~~~---~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~-~~l~~p~~~~~~~~~~~~d~~~ 384 (693)
T 3iuj_A 311 DAANPGPAHWRDLIPERQ---QVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRV-REVALPGLGSVSGFNGKHDDPA 384 (693)
T ss_dssp ETTSCCGGGCEEEECCCS---SCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEE-EEECCSSSSEEEECCCCTTCSC
T ss_pred eCCCCCccccEEEecCCC---CEE--EEEEECCEEEEEEEECCeeEEEEEECCCCee-EEeecCCCceEEeeecCCCCCE
Confidence 8876543 222 22222 222 7778887665544 444 688898764433 3332 23445666677777765
Q ss_pred EEEccCC----CcEEEeC
Q psy15417 163 VATGSWD----SFLRIWN 176 (176)
Q Consensus 163 l~tg~~d----~~v~vwd 176 (176)
++....+ +++..||
T Consensus 385 l~~~~ss~~tP~~l~~~d 402 (693)
T 3iuj_A 385 LYFGFENYAQPPTLYRFE 402 (693)
T ss_dssp EEEEEECSSSCCEEEEEC
T ss_pred EEEEecCCCCCCEEEEEE
Confidence 5443333 4566554
No 235
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.43 E-value=4.2e-06 Score=68.16 Aligned_cols=134 Identities=10% Similarity=0.019 Sum_probs=90.8
Q ss_pred EEcCCC---CEEEEEeCCCeEEEEEcCCCeeeeEecCCCCC-----------e------------------------eEE
Q psy15417 27 SLAPDM---RTFVSGACDASAKLWDIRDGSCKQTFPGHESD-----------I------------------------NAV 68 (176)
Q Consensus 27 ~~~~~~---~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~-----------v------------------------~~v 68 (176)
....+| ..++.++.+|.+.++|.++|+.+..++....+ + ..+
T Consensus 319 ~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~ 398 (677)
T 1kb0_A 319 DIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPM 398 (677)
T ss_dssp EEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCC
T ss_pred ecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCc
Confidence 333466 68899999999999999999987766532110 1 146
Q ss_pred EEccCCcEEEEeeC-------------------------------------------CCcEEEeeCCCCCeeeEEeecce
Q psy15417 69 TFFPNGWAFATGSD-------------------------------------------DATCRLFDIRADQELAMYSHDNI 105 (176)
Q Consensus 69 ~~~~~~~~l~s~s~-------------------------------------------d~~i~iwd~~~~~~~~~~~~~~~ 105 (176)
+|+|+...++.... .+.|..||+.+++.+........
T Consensus 399 a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~ 478 (677)
T 1kb0_A 399 SFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSP 478 (677)
T ss_dssp EEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSS
T ss_pred eEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCC
Confidence 78888777766543 16799999998877655544321
Q ss_pred EeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCC-ccEEEEEEeCCCCEE
Q psy15417 106 ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHD-NRVSCLGVTEDGMAV 163 (176)
Q Consensus 106 ~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l 163 (176)
.....+.+.+..++.++.++.+++||..+++.+..+.... .....+.|..+|+.+
T Consensus 479 ---~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~ 534 (677)
T 1kb0_A 479 ---WNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQY 534 (677)
T ss_dssp ---CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred ---CcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEE
Confidence 2222344466778888999999999999999888775332 222345566676543
No 236
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.40 E-value=5e-05 Score=56.38 Aligned_cols=157 Identities=9% Similarity=0.032 Sum_probs=100.7
Q ss_pred ccCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCeeee-EecC----C--CCCeeEEEE---ccCCcEEEEeeC------
Q psy15417 20 TGDVMSLSLAPDMRTFVSGA-CDASAKLWDIRDGSCKQ-TFPG----H--ESDINAVTF---FPNGWAFATGSD------ 82 (176)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~s-~dg~v~~wd~~~~~~~~-~~~~----h--~~~v~~v~~---~~~~~~l~s~s~------ 82 (176)
...-.+++|++....|..++ ..++|..||...+.... .+.+ . ...+.++.+ .|++.++++...
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 34445789988666666666 78999999997554322 3332 1 123578999 688877775431
Q ss_pred -------CCcEEEeeCC---CCCeeeEEeecc-----------eEeceEEEEECCCCcEEEEEcCC-CeEEEEeCCCcee
Q psy15417 83 -------DATCRLFDIR---ADQELAMYSHDN-----------IICGITSVAFSRSGRLLLAGYDD-FNCNVWDSMKTER 140 (176)
Q Consensus 83 -------d~~i~iwd~~---~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~g~~d-~~i~v~d~~~~~~ 140 (176)
++.+..+|+. +++.+....... .....+.+++.++|+.+++++.. +.|...+......
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~ 171 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTV 171 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCE
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEE
Confidence 5778889998 666554333211 11247889999999999998888 8887777433222
Q ss_pred eeeecCC-----CccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 141 AGILAGH-----DNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 141 ~~~~~~~-----~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
....... ....+.+++.|++..|+....++.+.-||
T Consensus 172 ~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD 212 (334)
T 2p9w_A 172 STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFD 212 (334)
T ss_dssp EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEE
T ss_pred eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEc
Confidence 1111111 11256789999998776665588777654
No 237
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.38 E-value=6.7e-05 Score=57.86 Aligned_cols=149 Identities=9% Similarity=0.097 Sum_probs=93.2
Q ss_pred CeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeC-CC----cEEEeeCCCCC
Q psy15417 22 DVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD-DA----TCRLFDIRADQ 95 (176)
Q Consensus 22 ~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~----~i~iwd~~~~~ 95 (176)
....++++| ++..|+.+...+.|..+|+..++..... ........++|+++++.++.+.. .+ .+...+ +.+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-RESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-GGGT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-CCCc
Confidence 456789998 4566666665578899999877644333 34456889999999985555544 22 222233 2222
Q ss_pred ee--eEEeecceEeceEEEEECC-CCcEEEEEcCCCeEEEEeCCCceeeeee-cCCCccEEEEEEeCCCC-EEEEccCCC
Q psy15417 96 EL--AMYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNVWDSMKTERAGIL-AGHDNRVSCLGVTEDGM-AVATGSWDS 170 (176)
Q Consensus 96 ~~--~~~~~~~~~~~v~~~~~~~-~~~~l~~g~~d~~i~v~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~-~l~tg~~d~ 170 (176)
.. ...... .....++++| ++.++++-..++.|..++.......... ......-..++|+|+++ .+++-...+
T Consensus 216 ~~~~~~l~~~---~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~ 292 (430)
T 3tc9_A 216 FKVITELTKG---QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQH 292 (430)
T ss_dssp SCSEEEEEEC---SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTT
T ss_pred eeeeeeeccC---CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCC
Confidence 21 111111 1234678999 7888888878889999997655432211 11123456899999998 455656677
Q ss_pred cEEEe
Q psy15417 171 FLRIW 175 (176)
Q Consensus 171 ~v~vw 175 (176)
+|..+
T Consensus 293 ~I~~~ 297 (430)
T 3tc9_A 293 YILRS 297 (430)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77765
No 238
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.36 E-value=7.6e-05 Score=55.97 Aligned_cols=138 Identities=10% Similarity=-0.060 Sum_probs=86.5
Q ss_pred CCEEEEEeCCCeEEEEEcCCCeeeeEecCCC---------CCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEee
Q psy15417 32 MRTFVSGACDASAKLWDIRDGSCKQTFPGHE---------SDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSH 102 (176)
Q Consensus 32 ~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~---------~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~ 102 (176)
+..++.++.++.|..+|.++++.+..+.... ..+.+. ...++..++.++.++.+..+|.++++.+.....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 5677888889999999999999887776432 223222 222355677788899999999988877655443
Q ss_pred cceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccE-----EEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 103 DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRV-----SCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 103 ~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i-----~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
........ .. .+..+++++.++.+..+|..+++............ ....+. +..+..++.++.+..+|
T Consensus 132 ~~~~~~~p--~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d 204 (376)
T 3q7m_A 132 AGEALSRP--VV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVL 204 (376)
T ss_dssp SSCCCSCC--EE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEE
T ss_pred CCceEcCC--EE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEE
Confidence 32211111 11 13466777889999999988887766654322111 111222 34566777777776653
No 239
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.33 E-value=8.3e-05 Score=54.72 Aligned_cols=153 Identities=9% Similarity=0.031 Sum_probs=92.3
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecC--------------------CCCCeeEEEEcc-CCcEEEE
Q psy15417 21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG--------------------HESDINAVTFFP-NGWAFAT 79 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~--------------------h~~~v~~v~~~~-~~~~l~s 79 (176)
....++++++++.++.++..++.|..||..+++.. .+.. ....+.++++.+ +++.+++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 34457888999887888888999999998765432 2211 013478899997 6655544
Q ss_pred eeCCCcEEEeeCCCCCeeeEEe-ecc-eEeceEEEEECC-CCcEEEEEcC-----------------CCeEEEEeCCCce
Q psy15417 80 GSDDATCRLFDIRADQELAMYS-HDN-IICGITSVAFSR-SGRLLLAGYD-----------------DFNCNVWDSMKTE 139 (176)
Q Consensus 80 ~s~d~~i~iwd~~~~~~~~~~~-~~~-~~~~v~~~~~~~-~~~~l~~g~~-----------------d~~i~v~d~~~~~ 139 (176)
...+.+..+|..++....... ... .....+.+++.+ ++.++++-.. ++.+..+|...++
T Consensus 98 -d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 98 -DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp -ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred -ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 444558888865443211111 111 112356789999 9987776432 3678888865554
Q ss_pred eeeeecCCCccEEEEEEeCCCCEE-EEccCCCcEEEeC
Q psy15417 140 RAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSFLRIWN 176 (176)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~v~vwd 176 (176)
....... ......++++|++..| ++-..++.|.+|+
T Consensus 177 ~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~ 213 (322)
T 2fp8_A 177 TTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYW 213 (322)
T ss_dssp EEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEE
T ss_pred EEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEE
Confidence 3222111 1223468899998754 4445556776653
No 240
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.31 E-value=9.9e-05 Score=53.05 Aligned_cols=130 Identities=10% Similarity=0.115 Sum_probs=88.5
Q ss_pred CEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeec--c-eEece
Q psy15417 33 RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD--N-IICGI 109 (176)
Q Consensus 33 ~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~--~-~~~~v 109 (176)
++..+...++.+.+||.++.+.+.+++-.. ....+.+++..|+.+..++.|.++|..+.+.+...... . ....+
T Consensus 98 ~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~l 174 (262)
T 3nol_A 98 KIVGLTWKNGLGFVWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPEL 174 (262)
T ss_dssp EEEEEESSSSEEEEEETTTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCE
T ss_pred EEEEEEeeCCEEEEEECccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCcccccc
Confidence 334444457889999999999998887532 22334456776766666788999999887766554331 1 11334
Q ss_pred EEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC------------CccEEEEEEeCCCCEE-EEc
Q psy15417 110 TSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH------------DNRVSCLGVTEDGMAV-ATG 166 (176)
Q Consensus 110 ~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~------------~~~i~~~~~~~~~~~l-~tg 166 (176)
+-+.+. +|.+++....+..|.+.|..+++.+..+.-. ..-.+.+|++|+++.| +||
T Consensus 175 NELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 175 NELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred ceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 556665 7887777777889999999998877665421 1245889999986655 444
No 241
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.28 E-value=2.7e-05 Score=63.54 Aligned_cols=128 Identities=13% Similarity=0.059 Sum_probs=85.5
Q ss_pred EEEEEeCCCeEEEEEcCCCeeeeEecCCCC---------------------------------------CeeEEEEccCC
Q psy15417 34 TFVSGACDASAKLWDIRDGSCKQTFPGHES---------------------------------------DINAVTFFPNG 74 (176)
Q Consensus 34 ~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~---------------------------------------~v~~v~~~~~~ 74 (176)
.++.++.+|.+.++|.++|+.+...+.... .-..++|+|+.
T Consensus 321 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~ 400 (689)
T 1yiq_A 321 VLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDT 400 (689)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTT
T ss_pred EEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCC
Confidence 788999999999999999987743321100 01126788887
Q ss_pred cEEEEeeC---------------------------------------------CCcEEEeeCCCCCeeeEEeecceEece
Q psy15417 75 WAFATGSD---------------------------------------------DATCRLFDIRADQELAMYSHDNIICGI 109 (176)
Q Consensus 75 ~~l~s~s~---------------------------------------------d~~i~iwd~~~~~~~~~~~~~~~~~~v 109 (176)
..++.... ++.+..||+++++.+........ .
T Consensus 401 ~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~---~ 477 (689)
T 1yiq_A 401 GLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI---F 477 (689)
T ss_dssp TEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS---C
T ss_pred CEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC---c
Confidence 67665422 36799999998877655443321 1
Q ss_pred EEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCc-cEEEEEEeCCCC-EEE
Q psy15417 110 TSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDN-RVSCLGVTEDGM-AVA 164 (176)
Q Consensus 110 ~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~-~l~ 164 (176)
..-.+...+.+++.|+.|+.++.||.++++.+..+..... ....+.|..+|+ |++
T Consensus 478 ~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 478 NGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp CCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred cCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEE
Confidence 1123334667888899999999999999999887764422 223466766765 444
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.26 E-value=2.7e-05 Score=57.01 Aligned_cols=135 Identities=13% Similarity=0.097 Sum_probs=89.6
Q ss_pred CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEE
Q psy15417 32 MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITS 111 (176)
Q Consensus 32 ~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 111 (176)
+..+..++.++.+..+|.+ ++....+..+...+.++...+++. ++.++.++.+..+|.. ++....+.... ..+.+
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~--~~~~~ 181 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTND--AITSA 181 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSS--CCCSC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCC--Cceee
Confidence 4567778888999999998 777777766655667777777776 5556778899999987 55544443322 23445
Q ss_pred EEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 112 VAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 112 ~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
+...+++.+++.. +.+..+| .+++...........+.++.+.+++.. ..++.++.+..+|
T Consensus 182 ~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l-~v~t~~~gl~~~~ 241 (330)
T 3hxj_A 182 ASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTI-YVTSLDGHLYAIN 241 (330)
T ss_dssp CEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCE-EEEETTTEEEEEC
T ss_pred eEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeE-EEEcCCCeEEEEC
Confidence 5666677765554 6788999 666666555544455667777777654 4455566665543
No 243
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.24 E-value=2.7e-05 Score=64.15 Aligned_cols=113 Identities=14% Similarity=0.097 Sum_probs=70.7
Q ss_pred CeEEEEEc-CCCCEEEEEeC-C----CeEEEEEcCCC-eeee-EecCCCCCeeEEEEccCCcEEEEeeCC-----CcEEE
Q psy15417 22 DVMSLSLA-PDMRTFVSGAC-D----ASAKLWDIRDG-SCKQ-TFPGHESDINAVTFFPNGWAFATGSDD-----ATCRL 88 (176)
Q Consensus 22 ~V~~~~~~-~~~~~l~s~s~-d----g~v~~wd~~~~-~~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~d-----~~i~i 88 (176)
.+....|| |||++++-... + .+|+++|+.++ +.+. .+. ....++.|+|+++.|+-...| ..|..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 56789999 99997764332 2 35999999988 6321 111 113468899999877766654 25777
Q ss_pred eeCCCCCe--eeEEeecceEeceEEEEECCCCcEEEEEc---CCCeEEEEeCCCc
Q psy15417 89 FDIRADQE--LAMYSHDNIICGITSVAFSRSGRLLLAGY---DDFNCNVWDSMKT 138 (176)
Q Consensus 89 wd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~g~---~d~~i~v~d~~~~ 138 (176)
+++.+++. ...+..... .-...+.|+||+++|+... ....+.++|+..+
T Consensus 252 ~~lgt~~~~~~lv~~~~~~-~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNP-LFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EETTSCGGGCEEEEECCCT-TCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EECCCCchhcEEEEecCCC-ceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 78876542 223322111 1134678999999776544 2345778887654
No 244
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.18 E-value=9.8e-05 Score=55.36 Aligned_cols=136 Identities=10% Similarity=-0.047 Sum_probs=89.3
Q ss_pred CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEE
Q psy15417 32 MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITS 111 (176)
Q Consensus 32 ~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 111 (176)
+..++.++.++.+..+|.++++.+..... .....+.. ++..++.++.++.+..+|..+++.+........ .....
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~-~~~~~ 313 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLH-RLLTS 313 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTT-SCCCC
T ss_pred CCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCC-CcccC
Confidence 45677778899999999999988877653 22333333 356777788899999999988876544331110 01111
Q ss_pred EEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEE-EEEeCCCCEEEEccCCCcEEEeC
Q psy15417 112 VAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSC-LGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 112 ~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
... .+..++.+..++.++.+|..+++...........+.. .... +..|..++.+|.+..||
T Consensus 314 ~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~--~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 314 PVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAA--DGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp CEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEE--TTEEEEEBTTSCEEEEE
T ss_pred CEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEE--CCEEEEEeCCCEEEEEe
Confidence 111 2456777888999999999888877766543333222 1222 45677888899998875
No 245
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.18 E-value=4e-05 Score=56.07 Aligned_cols=143 Identities=14% Similarity=0.072 Sum_probs=89.3
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEee
Q psy15417 23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSH 102 (176)
Q Consensus 23 V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~ 102 (176)
+.++...+++. +..++.++.+..+|.. ++....+......+.++.+.+++..++.. +.+..+| .+++.......
T Consensus 139 ~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~ 212 (330)
T 3hxj_A 139 YATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYA 212 (330)
T ss_dssp CSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECC
T ss_pred eeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEcc
Confidence 44455565665 5567778999999998 87777776656667778887788765554 7888898 55554433332
Q ss_pred cceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417 103 DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 103 ~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd 176 (176)
.. ..+.++...+++.+.+ ++.++.+..+| ..++...........+..+.+.+++ .|..++.++.+..+|
T Consensus 213 ~~--~~~~~~~~~~~g~l~v-~t~~~gl~~~~-~~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 213 GY--WTVTRPAISEDGTIYV-TSLDGHLYAIN-PDGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAIN 281 (330)
T ss_dssp SS--CCCSCCEECTTSCEEE-EETTTEEEEEC-TTSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEEC
T ss_pred CC--cceeceEECCCCeEEE-EcCCCeEEEEC-CCCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEEC
Confidence 21 2355667777776554 45567787887 4555545444333333334454455 455666776776664
No 246
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.17 E-value=9.5e-05 Score=57.18 Aligned_cols=145 Identities=13% Similarity=0.120 Sum_probs=95.6
Q ss_pred CCCCEE-EEEeCCCeEEEEEcCCC----eeeeEec------C-CCCCeeEEEEccCCcEEEEeeCC------CcEEEeeC
Q psy15417 30 PDMRTF-VSGACDASAKLWDIRDG----SCKQTFP------G-HESDINAVTFFPNGWAFATGSDD------ATCRLFDI 91 (176)
Q Consensus 30 ~~~~~l-~s~s~dg~v~~wd~~~~----~~~~~~~------~-h~~~v~~v~~~~~~~~l~s~s~d------~~i~iwd~ 91 (176)
++.++| +++-.+..|.++|..+. +...++. . -....-.+...|++ .++++..+ +.+.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 667655 55666788999999765 5555552 0 11133457788999 77777665 78999999
Q ss_pred CCCCeeeEEeecceEece-EEEEECCCCcEEEEEc-------------------CCCeEEEEeCCCceeeeeecCC-C-c
Q psy15417 92 RADQELAMYSHDNIICGI-TSVAFSRSGRLLLAGY-------------------DDFNCNVWDSMKTERAGILAGH-D-N 149 (176)
Q Consensus 92 ~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~g~-------------------~d~~i~v~d~~~~~~~~~~~~~-~-~ 149 (176)
++.+.+..++.......+ ..+-|+|+++.+++.. ...+|.+||+.+++...++.-- . .
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 988877776533111111 1366799999888874 3679999999887776666532 2 2
Q ss_pred cEEEEEE--eCCCCEEEEcc------CCCcEEEe
Q psy15417 150 RVSCLGV--TEDGMAVATGS------WDSFLRIW 175 (176)
Q Consensus 150 ~i~~~~~--~~~~~~l~tg~------~d~~v~vw 175 (176)
....+.| +|++.++..+. .+++|.+|
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~ 285 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLW 285 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEE
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEE
Confidence 2344555 99998766555 45566554
No 247
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.17 E-value=1.8e-05 Score=59.83 Aligned_cols=93 Identities=13% Similarity=-0.094 Sum_probs=71.0
Q ss_pred eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee----------CCCcEEEeeCCCCCeeeEEeecc-e----Ee
Q psy15417 43 SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS----------DDATCRLFDIRADQELAMYSHDN-I----IC 107 (176)
Q Consensus 43 ~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s----------~d~~i~iwd~~~~~~~~~~~~~~-~----~~ 107 (176)
+|.++|..+++.+.+++.-..+ .+.++|+++.++.+. .++.|.+||+.+.+.+....... . ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 7889999999999988765566 899999998888876 46889999999988876654320 0 00
Q ss_pred ceEEEEECCCCcEEEEEcC--CCeEEE--EeCCC
Q psy15417 108 GITSVAFSRSGRLLLAGYD--DFNCNV--WDSMK 137 (176)
Q Consensus 108 ~v~~~~~~~~~~~l~~g~~--d~~i~v--~d~~~ 137 (176)
....+.++||+++++++.. +..+.+ +|..+
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 1235889999998888764 456888 88755
No 248
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.16 E-value=9.9e-05 Score=60.04 Aligned_cols=151 Identities=12% Similarity=0.141 Sum_probs=99.2
Q ss_pred EEEEcCCCCEEEEEeCCCe-------------------EEEEEcCCCeeeeEecC--CC-------CCeeEEEEccCCc-
Q psy15417 25 SLSLAPDMRTFVSGACDAS-------------------AKLWDIRDGSCKQTFPG--HE-------SDINAVTFFPNGW- 75 (176)
Q Consensus 25 ~~~~~~~~~~l~s~s~dg~-------------------v~~wd~~~~~~~~~~~~--h~-------~~v~~v~~~~~~~- 75 (176)
.+.++++..+++.++.++. |..+|.++|+.+..++. |. .+..-..+..+++
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 4678888888888887764 99999999999988875 22 2333233334664
Q ss_pred --EEEEeeCCCcEEEeeCCCCCeeeEEeecce--Ee--------ce------------------------EEEEECCCCc
Q psy15417 76 --AFATGSDDATCRLFDIRADQELAMYSHDNI--IC--------GI------------------------TSVAFSRSGR 119 (176)
Q Consensus 76 --~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~--~~--------~v------------------------~~~~~~~~~~ 119 (176)
.++.++.+|.+.++|.++++.+...+.... .. ++ ..++++|+..
T Consensus 314 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g 393 (668)
T 1kv9_A 314 RKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTG 393 (668)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTT
T ss_pred EEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCC
Confidence 689999999999999988887643322110 00 00 1145666655
Q ss_pred EEEEE------------------------------------cCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE
Q psy15417 120 LLLAG------------------------------------YDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV 163 (176)
Q Consensus 120 ~l~~g------------------------------------~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 163 (176)
+++.. ..++.+..||..+++.......+.. .....+...+..+
T Consensus 394 ~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~~~~~t~gg~v 472 (668)
T 1kv9_A 394 LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTH-WNGGTLSTAGNLV 472 (668)
T ss_dssp EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSS-CCCCEEEETTTEE
T ss_pred EEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCC-CcCceeEeCCCEE
Confidence 44431 1347899999999988776653322 2222344456788
Q ss_pred EEccCCCcEEEeC
Q psy15417 164 ATGSWDSFLRIWN 176 (176)
Q Consensus 164 ~tg~~d~~v~vwd 176 (176)
+.|+.|+.++.||
T Consensus 473 f~g~~dg~l~a~d 485 (668)
T 1kv9_A 473 FQGTAAGQMHAYS 485 (668)
T ss_dssp EEECTTSEEEEEE
T ss_pred EEECCcccchhhh
Confidence 8889999999886
No 249
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.16 E-value=0.00075 Score=47.99 Aligned_cols=148 Identities=11% Similarity=-0.001 Sum_probs=92.7
Q ss_pred cCeEEEEEcCCCCEEEEEeCCC--eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCc-EEEEeeCCCcEEEeeCCCCCee
Q psy15417 21 GDVMSLSLAPDMRTFVSGACDA--SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW-AFATGSDDATCRLFDIRADQEL 97 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~dg--~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~ 97 (176)
.-.-.+.|++ +.++.+.+.+| .|..+|+++++.+..+.-... .......+.+. .+...-.++.+.++|..+.+.+
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSEEEEEETTTTEEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEE
Confidence 3455788986 55556666554 799999999998887764432 33333333344 4444456788999999988888
Q ss_pred eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC--C---ccEEEEEEeCCCCEEEEccCCCcE
Q psy15417 98 AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH--D---NRVSCLGVTEDGMAVATGSWDSFL 172 (176)
Q Consensus 98 ~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~--~---~~i~~~~~~~~~~~l~tg~~d~~v 172 (176)
..++.... +. .+.+++..|+....++.+.++|..+.+....+.-. . ..++.+.+. +|..++..-.+..|
T Consensus 99 ~ti~~~~~--Gw---glt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I 172 (243)
T 3mbr_X 99 ARFRYPGE--GW---ALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRI 172 (243)
T ss_dssp EEEECSSC--CC---EEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEE
T ss_pred EEEeCCCC--ce---EEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeE
Confidence 77766542 22 22246666666667889999998887766655421 1 234555555 45555555445556
Q ss_pred EEeC
Q psy15417 173 RIWN 176 (176)
Q Consensus 173 ~vwd 176 (176)
.+.|
T Consensus 173 ~vID 176 (243)
T 3mbr_X 173 ARID 176 (243)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 5543
No 250
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.15 E-value=1.4e-05 Score=63.66 Aligned_cols=140 Identities=12% Similarity=0.064 Sum_probs=91.7
Q ss_pred EEEEcCCCCEEEEEeCCC--------------------------------------eEEEEEcCC--Cee-eeEecCCCC
Q psy15417 25 SLSLAPDMRTFVSGACDA--------------------------------------SAKLWDIRD--GSC-KQTFPGHES 63 (176)
Q Consensus 25 ~~~~~~~~~~l~s~s~dg--------------------------------------~v~~wd~~~--~~~-~~~~~~h~~ 63 (176)
.++++|+++++++.+.+. .|.+.|.++ ++. +..++.. .
T Consensus 199 ~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg-~ 277 (595)
T 1fwx_A 199 NCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIA-N 277 (595)
T ss_dssp CEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEE-S
T ss_pred ceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecC-C
Confidence 467888999888888653 477777776 433 4444422 2
Q ss_pred CeeEEEEccCCcEEEEee-CCCcEEEeeCCCCCe----------eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEE
Q psy15417 64 DINAVTFFPNGWAFATGS-DDATCRLFDIRADQE----------LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNV 132 (176)
Q Consensus 64 ~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v 132 (176)
..-++.++|||++++.++ .+.++.++|+.+.+. ......+ .-.+..-++|+|+|..+++-..++++.+
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~k 356 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVK 356 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEE
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECCCCeEEEEEecCCcEEE
Confidence 456799999998766555 578899999875321 0111111 1123456899999976778889999999
Q ss_pred EeCCC----------ceeeeeecCCCccE-EE----EEEeCCCCEEEEc
Q psy15417 133 WDSMK----------TERAGILAGHDNRV-SC----LGVTEDGMAVATG 166 (176)
Q Consensus 133 ~d~~~----------~~~~~~~~~~~~~i-~~----~~~~~~~~~l~tg 166 (176)
||+.. .+.+.++.-|..+- .+ ..++|+|++|.+.
T Consensus 357 wdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~ 405 (595)
T 1fwx_A 357 WNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCL 405 (595)
T ss_dssp EEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEE
T ss_pred EEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEc
Confidence 99766 44566666665531 12 2347899998765
No 251
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.15 E-value=0.00055 Score=48.69 Aligned_cols=131 Identities=11% Similarity=0.070 Sum_probs=88.3
Q ss_pred CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecc---eEec
Q psy15417 32 MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDN---IICG 108 (176)
Q Consensus 32 ~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~---~~~~ 108 (176)
+++......++.+.+||.++.+.+.+++....+ .++ .+++..|+.+..++.|.++|..+.+.+....... ....
T Consensus 75 ~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G-wgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~ 151 (243)
T 3mbr_X 75 DRLIQLTWRNHEGFVYDLATLTPRARFRYPGEG-WAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDN 151 (243)
T ss_dssp TEEEEEESSSSEEEEEETTTTEEEEEEECSSCC-CEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCC
T ss_pred CEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc-eEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCccccc
Confidence 344455556888999999999999988753322 334 4566666666668899999998877665543211 1123
Q ss_pred eEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC-------------CCccEEEEEEeCCCCEE-EEc
Q psy15417 109 ITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG-------------HDNRVSCLGVTEDGMAV-ATG 166 (176)
Q Consensus 109 v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~l-~tg 166 (176)
++-+.+. ++.+++....+..|.+.|..+++.+..+.- ...-.+.+|+.|+++.| +||
T Consensus 152 lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 152 LNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred ceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 4555554 777777777778999999998887766531 11246889999976554 555
No 252
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.13 E-value=0.0003 Score=51.68 Aligned_cols=148 Identities=5% Similarity=-0.020 Sum_probs=92.0
Q ss_pred CeEEEEEcC-CCCEEEEEeC-----------------CCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEE-EeeC
Q psy15417 22 DVMSLSLAP-DMRTFVSGAC-----------------DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA-TGSD 82 (176)
Q Consensus 22 ~V~~~~~~~-~~~~l~s~s~-----------------dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~ 82 (176)
..+.+++.+ ++.+.++-.. ++.|..+|..+++....... -...+.++++|+++.++ +-..
T Consensus 127 ~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~ 205 (322)
T 2fp8_A 127 WLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFL 205 (322)
T ss_dssp CEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGG
T ss_pred ccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCC
Confidence 467899999 8887766432 36788888877764332221 13357899999987554 4455
Q ss_pred CCcEEEeeCCCCC--eeeEEeecceEeceEEEEECCCCcEEEEEcC----------CCeEEEEeCCCceeeeeecCC---
Q psy15417 83 DATCRLFDIRADQ--ELAMYSHDNIICGITSVAFSRSGRLLLAGYD----------DFNCNVWDSMKTERAGILAGH--- 147 (176)
Q Consensus 83 d~~i~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~----------d~~i~v~d~~~~~~~~~~~~~--- 147 (176)
.+.|..+++.... ....+.... . ...+++.++|.++++... .+.+..+|. .++.+..+...
T Consensus 206 ~~~I~~~~~~~~~~~~~~~~~~~~--g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~ 281 (322)
T 2fp8_A 206 SHQIVKYWLEGPKKGTAEVLVKIP--N-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPF 281 (322)
T ss_dssp GTEEEEEESSSTTTTCEEEEEECS--S-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTT
T ss_pred CCeEEEEECCCCcCCccceEEeCC--C-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCC
Confidence 6889999986432 112222111 1 456889999987777654 456888885 46655555433
Q ss_pred -CccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417 148 -DNRVSCLGVTEDGMAVATGSWDSFLRIW 175 (176)
Q Consensus 148 -~~~i~~~~~~~~~~~l~tg~~d~~v~vw 175 (176)
...+..+++. ++..+++...++.|..+
T Consensus 282 ~~~~~~~~~~~-~g~L~v~~~~~~~i~~~ 309 (322)
T 2fp8_A 282 AGEHFEQIQEH-DGLLYIGTLFHGSVGIL 309 (322)
T ss_dssp TTSCCCEEEEE-TTEEEEECSSCSEEEEE
T ss_pred ccccceEEEEe-CCEEEEeecCCCceEEE
Confidence 2345556663 56666666667777765
No 253
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.12 E-value=0.00072 Score=48.66 Aligned_cols=136 Identities=8% Similarity=-0.002 Sum_probs=92.1
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecc-
Q psy15417 26 LSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDN- 104 (176)
Q Consensus 26 ~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~- 104 (176)
+++.. +++..+...++.+.+||.++.+.+.+++-... -.+++ +++..|+.+..++.|.++|..+.+.+.......
T Consensus 101 it~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~ 176 (268)
T 3nok_A 101 LASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTRYSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLR 176 (268)
T ss_dssp EEECS-SCEEEEESSSCEEEEEETTTTEEEEEEECSSC-CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEET
T ss_pred EEEeC-CEEEEEEccCCEEEEEECCcCcEEEEEeCCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCC
Confidence 55543 34445555688899999999999998875322 23344 567777777678899999998877665543211
Q ss_pred --eEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC-------------CccEEEEEEeCCC-CEEEEc
Q psy15417 105 --IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH-------------DNRVSCLGVTEDG-MAVATG 166 (176)
Q Consensus 105 --~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~-------------~~~i~~~~~~~~~-~~l~tg 166 (176)
....++-+.|. +|.+++....+..|.+.|..+++.+..+.-. ..-.+.+|+.|++ .+++||
T Consensus 177 g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 177 GQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 11234556665 7787777777889999999888876655311 1246889999875 455666
No 254
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.99 E-value=0.0011 Score=51.10 Aligned_cols=151 Identities=11% Similarity=0.045 Sum_probs=89.8
Q ss_pred cCeEEEEEcCC--CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCC---Cc-EEEeeCCCC
Q psy15417 21 GDVMSLSLAPD--MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDD---AT-CRLFDIRAD 94 (176)
Q Consensus 21 ~~V~~~~~~~~--~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d---~~-i~iwd~~~~ 94 (176)
.....++|+|+ ...|+.+...+.|+.+|..+++... +........++++.+++..+++-... .. +...+....
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~-~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI-KTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE-ECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE-eecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Confidence 34568999984 4555555554789999998876544 43344568999999999955554321 12 222222111
Q ss_pred Cee-eEEeecceEeceEEEEECC-CCcEEEEEcCCCeEEEEeCCCceeeeeec--CCCccEEEEEEeCCCC-EEEEccCC
Q psy15417 95 QEL-AMYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNVWDSMKTERAGILA--GHDNRVSCLGVTEDGM-AVATGSWD 169 (176)
Q Consensus 95 ~~~-~~~~~~~~~~~v~~~~~~~-~~~~l~~g~~d~~i~v~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~-~l~tg~~d 169 (176)
... ...... .....++++| ++.++++-..++.|+.+|...++....+. +....-..++|+|++. ++++-...
T Consensus 218 ~~~~~~~~~~---~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~ 294 (433)
T 4hw6_A 218 FTERLSLCNA---RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGK 294 (433)
T ss_dssp TCCEEEEEEC---SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTT
T ss_pred eecccccccc---CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCC
Confidence 110 111111 1234578899 78887787788899999976554422221 1122234689999998 44555566
Q ss_pred CcEEEe
Q psy15417 170 SFLRIW 175 (176)
Q Consensus 170 ~~v~vw 175 (176)
++|+.+
T Consensus 295 ~~I~~~ 300 (433)
T 4hw6_A 295 HCIYRV 300 (433)
T ss_dssp TEEEEE
T ss_pred CEEEEE
Confidence 677764
No 255
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.98 E-value=0.0025 Score=47.64 Aligned_cols=152 Identities=7% Similarity=-0.008 Sum_probs=91.1
Q ss_pred CeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCCCCCeeeE
Q psy15417 22 DVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIRADQELAM 99 (176)
Q Consensus 22 ~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~~~ 99 (176)
.+..++|++....| .+-...+.|..++++.......+...-....++++.+. ++.+++-...+.|.+.++........
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l 153 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL 153 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEE
Confidence 35788998755544 45455678888988765533333322345678999874 56667766778899998865433222
Q ss_pred EeecceEeceEEEEECCC-CcEEEEEcCC-CeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCE-EEEccCCCcEEEe
Q psy15417 100 YSHDNIICGITSVAFSRS-GRLLLAGYDD-FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMA-VATGSWDSFLRIW 175 (176)
Q Consensus 100 ~~~~~~~~~v~~~~~~~~-~~~l~~g~~d-~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~tg~~d~~v~vw 175 (176)
.. .. ......++++|. +.++.+-... +.|...+................-..++++|++.. +++=+..+.|..+
T Consensus 154 ~~-~~-l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~ 230 (349)
T 3v64_C 154 LW-QS-LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 230 (349)
T ss_dssp EC-TT-CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred Ee-CC-CCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEE
Confidence 21 11 123467889985 5555665555 78888886543222222222344678999975544 4454555566554
No 256
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.96 E-value=0.003 Score=47.91 Aligned_cols=154 Identities=8% Similarity=0.001 Sum_probs=91.6
Q ss_pred cCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417 21 GDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIRADQELA 98 (176)
Q Consensus 21 ~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~~ 98 (176)
.....++|++... ++.+-...+.|..++++.+.....+........++++.+. ++.+++-...+.|.+.++.......
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~ 195 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 195 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE
Confidence 3466899987555 4455556678889998766543333333345678999874 5666666667788888876443322
Q ss_pred EEeecceEeceEEEEECCCC-cEEEEEcCC-CeEEEEeCCCceeeeeecCCCccEEEEEEeCCCC-EEEEccCCCcEEEe
Q psy15417 99 MYSHDNIICGITSVAFSRSG-RLLLAGYDD-FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM-AVATGSWDSFLRIW 175 (176)
Q Consensus 99 ~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d-~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~tg~~d~~v~vw 175 (176)
.... . ......++++|.+ .++++-... +.|...+................-..++++|++. ++++=+..+.|..+
T Consensus 196 l~~~-~-l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~ 273 (386)
T 3v65_B 196 LLWQ-S-LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 273 (386)
T ss_dssp EECS-S-CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred eecC-C-CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEE
Confidence 2221 1 1234678898865 455554444 6788888654333222222334457899986544 44455556667665
Q ss_pred C
Q psy15417 176 N 176 (176)
Q Consensus 176 d 176 (176)
|
T Consensus 274 d 274 (386)
T 3v65_B 274 N 274 (386)
T ss_dssp C
T ss_pred e
Confidence 4
No 257
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.87 E-value=0.003 Score=44.97 Aligned_cols=152 Identities=11% Similarity=0.060 Sum_probs=87.2
Q ss_pred cCeEEEEEcCCCCE-EEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEeeC--CCcEEEeeCCCCCe
Q psy15417 21 GDVMSLSLAPDMRT-FVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSD--DATCRLFDIRADQE 96 (176)
Q Consensus 21 ~~V~~~~~~~~~~~-l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~--d~~i~iwd~~~~~~ 96 (176)
.....+++++++.. +++-...+.|.+++.+.......+.......+.++++|+ +..+++... .+.|..+++.....
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~ 158 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR 158 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc
Confidence 45678999987554 445555678999998644322222222245789999996 444444433 36787777754322
Q ss_pred eeEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417 97 LAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175 (176)
Q Consensus 97 ~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw 175 (176)
....... ......++++|++. ++++-...+.|.++|............ ......+++. ++..+++...++.|..+
T Consensus 159 -~~~~~~~-~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~ 234 (267)
T 1npe_A 159 -RILAQDN-LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAM 234 (267)
T ss_dssp -EEEECTT-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred -EEEEECC-CCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEE
Confidence 2221111 12356789999754 556666778999999764433333322 2223455654 34444455455677665
Q ss_pred C
Q psy15417 176 N 176 (176)
Q Consensus 176 d 176 (176)
|
T Consensus 235 d 235 (267)
T 1npe_A 235 D 235 (267)
T ss_dssp E
T ss_pred e
Confidence 3
No 258
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.83 E-value=0.0053 Score=48.19 Aligned_cols=150 Identities=9% Similarity=0.033 Sum_probs=91.4
Q ss_pred CeEEEEEcC-CCCEEEEEeC-CCeEEEEEcCCCeeeeEecCC---CCCeeEEEE-------ccCCcEEEEeeCCC-c---
Q psy15417 22 DVMSLSLAP-DMRTFVSGAC-DASAKLWDIRDGSCKQTFPGH---ESDINAVTF-------FPNGWAFATGSDDA-T--- 85 (176)
Q Consensus 22 ~V~~~~~~~-~~~~l~s~s~-dg~v~~wd~~~~~~~~~~~~h---~~~v~~v~~-------~~~~~~l~s~s~d~-~--- 85 (176)
....|+|+| +...|+.+.. .+.|++.|+.++.....+... ......++| ++++..++.+...+ .
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 456899998 3555555544 466889999887765544432 235789999 99998666665543 2
Q ss_pred ---EEEeeCCC-CCee-----eEEeecceEeceEEEEECC-CCcEEEEEcCCCeEEEEeCC-------Ccee--------
Q psy15417 86 ---CRLFDIRA-DQEL-----AMYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNVWDSM-------KTER-------- 140 (176)
Q Consensus 86 ---i~iwd~~~-~~~~-----~~~~~~~~~~~v~~~~~~~-~~~~l~~g~~d~~i~v~d~~-------~~~~-------- 140 (176)
+.+.+-.. +... ...... .....++++| ++.++++-..++.+..+|.. .++.
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~---~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY---KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE---SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred CceEEEEecCCCCceeecccceeeccC---CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc
Confidence 44554222 1111 111111 1234678899 56777788888899999976 3332
Q ss_pred ------eeeecCCCccEEEEEEeCCCCE-EEEccCCCcEEEe
Q psy15417 141 ------AGILAGHDNRVSCLGVTEDGMA-VATGSWDSFLRIW 175 (176)
Q Consensus 141 ------~~~~~~~~~~i~~~~~~~~~~~-l~tg~~d~~v~vw 175 (176)
+... +....-..++|+|++.. +++=+..++|+.+
T Consensus 297 ~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~ki 337 (496)
T 3kya_A 297 PNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRS 337 (496)
T ss_dssp TTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEE
Confidence 1112 12234478999999984 4555566677764
No 259
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.83 E-value=0.0044 Score=45.54 Aligned_cols=153 Identities=6% Similarity=-0.044 Sum_probs=88.3
Q ss_pred cCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCC----CeeeeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCCCC
Q psy15417 21 GDVMSLSLAPDMR-TFVSGACDASAKLWDIRD----GSCKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 21 ~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~----~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
.....++|++.+. ++.+-..++.|..++++. ......+...-....++++.+ .++.+++-...+.|.+.++...
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 4467899998655 555555568899999875 222222332224568899986 4556666667788999998654
Q ss_pred CeeeEEeecceEeceEEEEECCCC-cEEEEEcCC-CeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCc
Q psy15417 95 QELAMYSHDNIICGITSVAFSRSG-RLLLAGYDD-FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSF 171 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d-~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~ 171 (176)
.......... .....++++|.+ .++++-... +.|...+.............-..-..+++.+++..| ++-+..+.
T Consensus 110 ~~~~~~~~~~--~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~ 187 (316)
T 1ijq_A 110 KRKTLFRENG--SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 187 (316)
T ss_dssp SEEEEEECTT--CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred ceEEEEECCC--CCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCe
Confidence 3322222111 234678899854 455554433 688888854332222222223456788999765444 45455556
Q ss_pred EEEe
Q psy15417 172 LRIW 175 (176)
Q Consensus 172 v~vw 175 (176)
|..+
T Consensus 188 I~~~ 191 (316)
T 1ijq_A 188 ISSI 191 (316)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 260
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.81 E-value=0.00086 Score=54.56 Aligned_cols=145 Identities=12% Similarity=0.056 Sum_probs=91.0
Q ss_pred CCEEEEEeCCCeEEEEEcCCCeeeeEecCCC----CCeeEEEEccCCcEEEEeeC-----CCcEEEeeCCCCCeeeEEee
Q psy15417 32 MRTFVSGACDASAKLWDIRDGSCKQTFPGHE----SDINAVTFFPNGWAFATGSD-----DATCRLFDIRADQELAMYSH 102 (176)
Q Consensus 32 ~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~----~~v~~v~~~~~~~~l~s~s~-----d~~i~iwd~~~~~~~~~~~~ 102 (176)
+..++.++.|+.+..+|.++|+.+..+.... ..+.+.-.-.++..++..+. ++.+..+|.++++.+..+..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 4567888889999999999999888776521 11111101114444433322 58899999999887765542
Q ss_pred cceE-----------------------------eceEEEEECCCCcEEEEEcCCC-------------------eEEEEe
Q psy15417 103 DNII-----------------------------CGITSVAFSRSGRLLLAGYDDF-------------------NCNVWD 134 (176)
Q Consensus 103 ~~~~-----------------------------~~v~~~~~~~~~~~l~~g~~d~-------------------~i~v~d 134 (176)
.... ..-...++.|+...++.+..++ .+..+|
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD 276 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence 1000 0012357788777888877665 388999
Q ss_pred CCCceeeeeecC--CC-------ccEEEEEEeCCCC---EEEEccCCCcEEEeC
Q psy15417 135 SMKTERAGILAG--HD-------NRVSCLGVTEDGM---AVATGSWDSFLRIWN 176 (176)
Q Consensus 135 ~~~~~~~~~~~~--~~-------~~i~~~~~~~~~~---~l~tg~~d~~v~vwd 176 (176)
..+++....+.. |. .......+..+|. .++.++.+|.++++|
T Consensus 277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD 330 (668)
T 1kv9_A 277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLD 330 (668)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEE
T ss_pred CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEE
Confidence 999988776653 22 2222223333554 678888999888875
No 261
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.80 E-value=0.0012 Score=52.83 Aligned_cols=149 Identities=12% Similarity=0.085 Sum_probs=91.8
Q ss_pred EEEcCCCCEEEEEeCC----------------CeEEEEEcCCCeeeeEecCC--C--------CCeeEEEEccCCc---E
Q psy15417 26 LSLAPDMRTFVSGACD----------------ASAKLWDIRDGSCKQTFPGH--E--------SDINAVTFFPNGW---A 76 (176)
Q Consensus 26 ~~~~~~~~~l~s~s~d----------------g~v~~wd~~~~~~~~~~~~h--~--------~~v~~v~~~~~~~---~ 76 (176)
+++.+....++.++.+ +.|..+|.++++.+..++.. . .++. +...++|+ .
T Consensus 240 ~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~ 318 (571)
T 2ad6_A 240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPL 318 (571)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEE
T ss_pred EEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEE
Confidence 4566766666666532 35999999999998887642 1 2221 22234674 5
Q ss_pred EEEeeCCCcEEEeeCCCCCeeeEEeecceE-----------ece--------------------------EEEEECCCCc
Q psy15417 77 FATGSDDATCRLFDIRADQELAMYSHDNII-----------CGI--------------------------TSVAFSRSGR 119 (176)
Q Consensus 77 l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~-----------~~v--------------------------~~~~~~~~~~ 119 (176)
++.++.+|.+.+.|..+++.+......... .++ ..++++|+..
T Consensus 319 v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g 398 (571)
T 2ad6_A 319 LSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESR 398 (571)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT
T ss_pred EEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCC
Confidence 778888999999999888776544322100 000 1346777765
Q ss_pred EEEEEc-------------------------------------CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCE
Q psy15417 120 LLLAGY-------------------------------------DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMA 162 (176)
Q Consensus 120 ~l~~g~-------------------------------------~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 162 (176)
++++.. .++.+..||..+++......... .+....+...+..
T Consensus 399 ~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~ 477 (571)
T 2ad6_A 399 TLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGL 477 (571)
T ss_dssp EEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTE
T ss_pred EEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC-CccceeEEECCCE
Confidence 555432 34789999988888776654221 1222222233456
Q ss_pred EEEccCCCcEEEeC
Q psy15417 163 VATGSWDSFLRIWN 176 (176)
Q Consensus 163 l~tg~~d~~v~vwd 176 (176)
+..++.|+.++.||
T Consensus 478 v~~g~~dg~l~a~D 491 (571)
T 2ad6_A 478 VWYATLDGYLKALD 491 (571)
T ss_dssp EEEECTTSEEEEEE
T ss_pred EEEEcCCCeEEEEE
Confidence 66788999998875
No 262
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.79 E-value=0.0044 Score=44.40 Aligned_cols=164 Identities=10% Similarity=0.119 Sum_probs=98.0
Q ss_pred ccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCee---eeEec------CCCCCeeEEEEccCCcEEEE
Q psy15417 9 ALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC---KQTFP------GHESDINAVTFFPNGWAFAT 79 (176)
Q Consensus 9 ~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~---~~~~~------~h~~~v~~v~~~~~~~~l~s 79 (176)
.++...++.|. .....+++.+++.++++.-.++.+.++++..... ..... .......++++.|.+..|+.
T Consensus 59 ~v~~~i~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~v 137 (255)
T 3qqz_A 59 DLIRTIPLDFV-KDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWF 137 (255)
T ss_dssp CEEEEEECSSC-SSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEE
T ss_pred CEEEEEecCCC-CChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEE
Confidence 33344444443 4567788888888777766778888888764331 12221 12355789999999877766
Q ss_pred eeCCCcEEEeeCC---CCCeeeEEee-----cceEeceEEEEECCC-CcEEEEEcCCCeEEEEeCCCceeeeeec---CC
Q psy15417 80 GSDDATCRLFDIR---ADQELAMYSH-----DNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDSMKTERAGILA---GH 147 (176)
Q Consensus 80 ~s~d~~i~iwd~~---~~~~~~~~~~-----~~~~~~v~~~~~~~~-~~~l~~g~~d~~i~v~d~~~~~~~~~~~---~~ 147 (176)
+.......+|.+. ....+..... ......++.++++|. +.+++....+..+..+|. .+++...+. +.
T Consensus 138 a~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~-~g~~~~~~~L~~g~ 216 (255)
T 3qqz_A 138 FKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTL-VGEVIGEMSLTKGS 216 (255)
T ss_dssp EEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECT-TCCEEEEEECSTTG
T ss_pred EECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcC-CCCEEEEEEcCCcc
Confidence 6665555555543 1111221111 011224678999997 456677778888999995 454444332 11
Q ss_pred ------CccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417 148 ------DNRVSCLGVTEDGMAVATGSWDSFLRIW 175 (176)
Q Consensus 148 ------~~~i~~~~~~~~~~~l~tg~~d~~v~vw 175 (176)
-.+-..++|.++|+.+++ +.-..++.|
T Consensus 217 ~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f 249 (255)
T 3qqz_A 217 RGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRF 249 (255)
T ss_dssp GGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEE
T ss_pred CCcccccCCCCeeEECCCCCEEEE-cCCceEEEE
Confidence 124578999999986655 454555544
No 263
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.77 E-value=0.002 Score=51.61 Aligned_cols=76 Identities=17% Similarity=0.184 Sum_probs=52.8
Q ss_pred EEEEcCCCCEEEEEeC--------------------C----CeEEEEEcCCCeeeeEecC--CC--------CCeeEEEE
Q psy15417 25 SLSLAPDMRTFVSGAC--------------------D----ASAKLWDIRDGSCKQTFPG--HE--------SDINAVTF 70 (176)
Q Consensus 25 ~~~~~~~~~~l~s~s~--------------------d----g~v~~wd~~~~~~~~~~~~--h~--------~~v~~v~~ 70 (176)
.++++|...+++.+.. | +.|..+|.++|+.+..++. |. .++. +..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~ 328 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDY 328 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eee
Confidence 3567777777776653 2 5799999999999988764 32 1221 122
Q ss_pred c-cCC---cEEEEeeCCCcEEEeeCCCCCeeeEEe
Q psy15417 71 F-PNG---WAFATGSDDATCRLFDIRADQELAMYS 101 (176)
Q Consensus 71 ~-~~~---~~l~s~s~d~~i~iwd~~~~~~~~~~~ 101 (176)
. .+| ..++.++.+|.+.++|.++++.+..+.
T Consensus 329 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 363 (582)
T 1flg_A 329 KAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFP 363 (582)
T ss_dssp ECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ecCCCCEEEEEEEECCCceEEEEECCCCCEecccc
Confidence 1 356 378889999999999998888765443
No 264
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.74 E-value=0.0012 Score=52.77 Aligned_cols=127 Identities=10% Similarity=0.001 Sum_probs=79.6
Q ss_pred EEEEEeCCCeEEEEEcCCCeeeeEecCCC-------------CCe--------------------------eEEEEccCC
Q psy15417 34 TFVSGACDASAKLWDIRDGSCKQTFPGHE-------------SDI--------------------------NAVTFFPNG 74 (176)
Q Consensus 34 ~l~s~s~dg~v~~wd~~~~~~~~~~~~h~-------------~~v--------------------------~~v~~~~~~ 74 (176)
.++.++.+|.+.++|.++++.+..++... .++ ..++++|+.
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 397 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES 397 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC
Confidence 56778889999999999999877654321 111 235677776
Q ss_pred cEEEEee-------------------------------------CCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCC
Q psy15417 75 WAFATGS-------------------------------------DDATCRLFDIRADQELAMYSHDNIICGITSVAFSRS 117 (176)
Q Consensus 75 ~~l~s~s-------------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 117 (176)
..++... .++.+..||+.+++.+..+........ ..+...
T Consensus 398 g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~---~~~~t~ 474 (571)
T 2ad6_A 398 RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWG---GTLYTK 474 (571)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCS---BCEEET
T ss_pred CEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccc---eeEEEC
Confidence 6655543 346788999988877655543321111 111123
Q ss_pred CcEEEEEcCCCeEEEEeCCCceeeeeecCCCc-cEEEEEEeCCCCEE
Q psy15417 118 GRLLLAGYDDFNCNVWDSMKTERAGILAGHDN-RVSCLGVTEDGMAV 163 (176)
Q Consensus 118 ~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l 163 (176)
+..++.++.++.++.+|..+++.+..+..... .-..+.+..+|..+
T Consensus 475 gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~y 521 (571)
T 2ad6_A 475 GGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQY 521 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEE
Confidence 45666688999999999999988877653322 11223354566543
No 265
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.71 E-value=0.0061 Score=43.64 Aligned_cols=161 Identities=14% Similarity=0.134 Sum_probs=97.5
Q ss_pred ccCCCccCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCeeeeEecCC-CCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417 15 AASGHTGDVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTFPGH-ESDINAVTFFPNGWAFATGSDDATCRLFDIR 92 (176)
Q Consensus 15 ~~~gh~~~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 92 (176)
++.|-.+.+..++|+|++..| ++...++.|...|.. ++..+.++-. .....++++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 456666789999999976644 557778888899987 7777776422 2567889999988876776566788888875
Q ss_pred CCCee---eEEeec----ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCC---Cceeeeee-------cCCCccEEEEE
Q psy15417 93 ADQEL---AMYSHD----NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM---KTERAGIL-------AGHDNRVSCLG 155 (176)
Q Consensus 93 ~~~~~---~~~~~~----~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~---~~~~~~~~-------~~~~~~i~~~~ 155 (176)
....+ ...... ....+.-.++++|.+..|.++.+.....+|... ....+... ..+...+..++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 54321 122111 111234578999998666665554444444432 11111111 11233568899
Q ss_pred EeCCCC-EEEEccCCCcEEEeC
Q psy15417 156 VTEDGM-AVATGSWDSFLRIWN 176 (176)
Q Consensus 156 ~~~~~~-~l~tg~~d~~v~vwd 176 (176)
+.|... +++.....+.+.++|
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d 201 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVT 201 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEEC
T ss_pred EcCCCCeEEEEECCCCeEEEEc
Confidence 998754 444444455555443
No 266
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.69 E-value=0.0079 Score=44.41 Aligned_cols=151 Identities=9% Similarity=0.029 Sum_probs=84.4
Q ss_pred CccCeEEEEEcCCCCEEEEEeCCCeEEEEEc--CCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe
Q psy15417 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDI--RDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE 96 (176)
Q Consensus 19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~--~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 96 (176)
+...+..+.+.+++.+++.+...+..+-.|- .+-+.+. ......+..+.+.+++..+ .++.+|.+.+.+...++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~t 237 (327)
T 2xbg_A 161 AIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSEN 237 (327)
T ss_dssp CCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEE
T ss_pred CCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCe
Confidence 4557888999998888777654443344442 2222221 2345678889998888655 455677777653221222
Q ss_pred eeEEeec--ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec---CCCccEEEEEEeCCCCEEEEccCCCc
Q psy15417 97 LAMYSHD--NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA---GHDNRVSCLGVTEDGMAVATGSWDSF 171 (176)
Q Consensus 97 ~~~~~~~--~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~tg~~d~~ 171 (176)
....... .....+..+.+.+++.+++++. ++.+ ++....++.-..+. .....+..+.|.+++. ++.++.+|.
T Consensus 238 W~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~ 314 (327)
T 2xbg_A 238 WGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGI 314 (327)
T ss_dssp ECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTE
T ss_pred eEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCce
Confidence 2211111 0112467788888877777765 5666 33333333322222 2234567788876554 455667887
Q ss_pred EEEe
Q psy15417 172 LRIW 175 (176)
Q Consensus 172 v~vw 175 (176)
|.-+
T Consensus 315 i~~~ 318 (327)
T 2xbg_A 315 LLRY 318 (327)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7655
No 267
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.69 E-value=0.0016 Score=52.19 Aligned_cols=79 Identities=13% Similarity=0.095 Sum_probs=49.2
Q ss_pred CCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCcc-EEEEEEeCCCC
Q psy15417 83 DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNR-VSCLGVTEDGM 161 (176)
Q Consensus 83 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~ 161 (176)
++.+..||+.+++.+........... ..+. ..+.+++.|+.|+.++.+|.++++.+..+...... -..+.+..+|.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~-g~~~--tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~ 541 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWA-GVLA--TAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGE 541 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCS-CCEE--ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred cceEEEEECCCCCEEEEecCCCCCcc-cceE--eCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCE
Confidence 57789999998877655443221111 0111 13456677899999999999999988877643322 12355656665
Q ss_pred -EEE
Q psy15417 162 -AVA 164 (176)
Q Consensus 162 -~l~ 164 (176)
|++
T Consensus 542 qYv~ 545 (582)
T 1flg_A 542 QYLG 545 (582)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 443
No 268
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.67 E-value=0.0054 Score=47.27 Aligned_cols=155 Identities=10% Similarity=0.021 Sum_probs=87.7
Q ss_pred ccCeEEEEEcCCCCEEEEEeCC---Ce-EEEEEcCCCee-eeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCCC
Q psy15417 20 TGDVMSLSLAPDMRTFVSGACD---AS-AKLWDIRDGSC-KQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRA 93 (176)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~s~d---g~-v~~wd~~~~~~-~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~ 93 (176)
......++|++++.++++-... .. +...+...+.. ...+. .-.....++++| ++..+++-...+.|..++..+
T Consensus 181 ~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~ 259 (433)
T 4hw6_A 181 IGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPAT 259 (433)
T ss_dssp CSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTT
T ss_pred CCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCC
Confidence 3457889999999955554321 12 33333322211 11222 123456788999 777777776778899998875
Q ss_pred CCe-eeEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCC--Ccee--eeeecC---------------CCccEE
Q psy15417 94 DQE-LAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSM--KTER--AGILAG---------------HDNRVS 152 (176)
Q Consensus 94 ~~~-~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~--~~~~--~~~~~~---------------~~~~i~ 152 (176)
+.. ......... .....++|+|++. ++++-..++.|+.++.. .++. ...+.+ .-..-.
T Consensus 260 g~~~~~~~~~~~~-~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~ 338 (433)
T 4hw6_A 260 GTLTEEEVMMDTK-GSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPN 338 (433)
T ss_dssp CCEEEEEEECSCC-SSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEE
T ss_pred CeEEEEEeccCCC-CCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCc
Confidence 544 122221111 1123589999998 55666677889997743 2211 011111 112345
Q ss_pred EEEE---------eCCCCEEEEccCCCcEEEeC
Q psy15417 153 CLGV---------TEDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 153 ~~~~---------~~~~~~l~tg~~d~~v~vwd 176 (176)
.+++ .+++.++++-...++|+.++
T Consensus 339 giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 339 QGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT 371 (433)
T ss_dssp EEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC
T ss_pred cEEEEccccccccCCCCcEEEEECCCCEEEEEC
Confidence 6888 66676767766777887764
No 269
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.64 E-value=0.0085 Score=43.60 Aligned_cols=151 Identities=13% Similarity=-0.018 Sum_probs=87.1
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCC--cEEEeeCCCCCeee
Q psy15417 21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA--TCRLFDIRADQELA 98 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~--~i~iwd~~~~~~~~ 98 (176)
.....++|++++.++++-..++.|..||.+.. ....+. ....+.++++.++++.+++..... .+..++..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 45678999999987777767899999998754 333333 234688999999998766654432 36556766655432
Q ss_pred EEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCce--eee--------eecCCCccEEEEEEeCCCCEE-EEcc
Q psy15417 99 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTE--RAG--------ILAGHDNRVSCLGVTEDGMAV-ATGS 167 (176)
Q Consensus 99 ~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~--~~~--------~~~~~~~~i~~~~~~~~~~~l-~tg~ 167 (176)
....... .....++..+++..+++-..++.+.++|...++ ... ...........+ ++++..| ++-.
T Consensus 110 ~~~~~~~-~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~ 186 (306)
T 2p4o_A 110 LLTLPDA-IFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNT 186 (306)
T ss_dssp EEECTTC-SCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEET
T ss_pred EEeCCCc-cccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeC
Confidence 2222111 112334445555566665568889899865432 110 000111123344 6666544 4555
Q ss_pred CCCcEEEeC
Q psy15417 168 WDSFLRIWN 176 (176)
Q Consensus 168 ~d~~v~vwd 176 (176)
..+.|..||
T Consensus 187 ~~~~I~~~~ 195 (306)
T 2p4o_A 187 EKMLLLRIP 195 (306)
T ss_dssp TTTEEEEEE
T ss_pred CCCEEEEEE
Confidence 566777663
No 270
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.60 E-value=0.01 Score=44.09 Aligned_cols=115 Identities=11% Similarity=0.078 Sum_probs=81.0
Q ss_pred CeEEEEE---cCCCCEEEEEe-------------CCCeEEEEEcC---CCeeeeEecC-------------CCCCeeEEE
Q psy15417 22 DVMSLSL---APDMRTFVSGA-------------CDASAKLWDIR---DGSCKQTFPG-------------HESDINAVT 69 (176)
Q Consensus 22 ~V~~~~~---~~~~~~l~s~s-------------~dg~v~~wd~~---~~~~~~~~~~-------------h~~~v~~v~ 69 (176)
.+..+.| .|+++++++.. .+..+..+|+. +++......- -....+.++
T Consensus 64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDva 143 (334)
T 2p9w_A 64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSA 143 (334)
T ss_dssp EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEE
T ss_pred eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeE
Confidence 4578999 68877777543 25778999999 7776554431 112488999
Q ss_pred EccCCcEEEEeeCC-CcEEEeeCCCCCeeeEEeec----ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC
Q psy15417 70 FFPNGWAFATGSDD-ATCRLFDIRADQELAMYSHD----NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137 (176)
Q Consensus 70 ~~~~~~~l~s~s~d-~~i~iwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~ 137 (176)
..++|+.+++++.. +.|...+.... .+..+... ......+-++++|++..|++....+.+..+|+..
T Consensus 144 vD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 144 QDRDGNSYVAFALGMPAIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp ECTTSCEEEEEEESSCEEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred ECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 99999999999888 88777765433 33322211 1123466899999999888877799999999764
No 271
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.57 E-value=0.007 Score=48.68 Aligned_cols=75 Identities=9% Similarity=0.048 Sum_probs=52.8
Q ss_pred EEEcCCCCEEEEEeCCC----------------eEEEEEcCCCeeeeEecCCC----------CCeeEEEEc-cCC---c
Q psy15417 26 LSLAPDMRTFVSGACDA----------------SAKLWDIRDGSCKQTFPGHE----------SDINAVTFF-PNG---W 75 (176)
Q Consensus 26 ~~~~~~~~~l~s~s~dg----------------~v~~wd~~~~~~~~~~~~h~----------~~v~~v~~~-~~~---~ 75 (176)
+++.+...+++.+..++ .|..+|.++|+.+..++... .++. +... .+| .
T Consensus 246 ~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~ 324 (599)
T 1w6s_A 246 YAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARK 324 (599)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEE
T ss_pred eeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEE
Confidence 45667777777776653 79999999999988877532 1221 2222 456 5
Q ss_pred EEEEeeCCCcEEEeeCCCCCeeeEEe
Q psy15417 76 AFATGSDDATCRLFDIRADQELAMYS 101 (176)
Q Consensus 76 ~l~s~s~d~~i~iwd~~~~~~~~~~~ 101 (176)
.++.++.+|.+.+.|.++++.+....
T Consensus 325 ~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 325 LLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCcEEEEEECCCCCEeeccc
Confidence 67888899999999998887765443
No 272
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.56 E-value=0.013 Score=43.68 Aligned_cols=149 Identities=7% Similarity=0.009 Sum_probs=85.1
Q ss_pred eEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEeeCC-CcEEEeeCCCCCeeeE
Q psy15417 23 VMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSDD-ATCRLFDIRADQELAM 99 (176)
Q Consensus 23 V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d-~~i~iwd~~~~~~~~~ 99 (176)
...+++++.+. ++.+-...+.|.+.+++.......+...-...+++++.|. +..+++-... +.|...++........
T Consensus 118 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~ 197 (349)
T 3v64_C 118 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII 197 (349)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEES
T ss_pred ccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEE
Confidence 45788887544 5555556678999998754333333333356789999985 5555555444 6788887754322211
Q ss_pred EeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417 100 YSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 174 (176)
Q Consensus 100 ~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v 174 (176)
.. .. ....+.++++|++ .++++=...+.|..+|...................+++. ++..+++-...+.|..
T Consensus 198 ~~-~~-~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~ 270 (349)
T 3v64_C 198 AD-TH-LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINS 270 (349)
T ss_dssp CC-SS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEE
T ss_pred EE-CC-CCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEE
Confidence 11 11 1234678999754 555665667789999865433222222223344567774 3444445444555543
No 273
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.56 E-value=0.015 Score=44.26 Aligned_cols=153 Identities=6% Similarity=-0.064 Sum_probs=89.3
Q ss_pred cCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCC----eeeeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCCCC
Q psy15417 21 GDVMSLSLAPDMRTF-VSGACDASAKLWDIRDG----SCKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~----~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
..+..++|++....| .+-...+.|..++++.. .....+...-....++++.+ .++.+++-...+.|.+.++...
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~ 191 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 191 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTC
T ss_pred CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCC
Confidence 467789999865544 44445677888888652 22223332345678899997 5666666667788999888655
Q ss_pred CeeeEEeecceEeceEEEEECCCC-cEEEEEcC-CCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCc
Q psy15417 95 QELAMYSHDNIICGITSVAFSRSG-RLLLAGYD-DFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSF 171 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~-d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~ 171 (176)
......... . .....++++|.+ .++.+-.. .+.|...++...............-..+++.+++..| ++=+..+.
T Consensus 192 ~~~~l~~~~-~-~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~ 269 (400)
T 3p5b_L 192 KRKTLFREN-G-SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 269 (400)
T ss_dssp SEEEEEECS-S-CCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred ceEEEEeCC-C-CCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCE
Confidence 433332211 1 234678899854 44444322 4678888865433333323333456788999765544 44344555
Q ss_pred EEEe
Q psy15417 172 LRIW 175 (176)
Q Consensus 172 v~vw 175 (176)
|..+
T Consensus 270 I~~~ 273 (400)
T 3p5b_L 270 ISSI 273 (400)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6554
No 274
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.54 E-value=0.027 Score=46.80 Aligned_cols=153 Identities=7% Similarity=-0.040 Sum_probs=88.6
Q ss_pred cCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCC----eeeeEecCCCCCeeEEEEccCC-cEEEEeeCCCcEEEeeCCCC
Q psy15417 21 GDVMSLSLAPDM-RTFVSGACDASAKLWDIRDG----SCKQTFPGHESDINAVTFFPNG-WAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 21 ~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~----~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~~~ 94 (176)
..+..++|++.. .++.+-...+.|+.+++... .....+...-....++++.+.+ +++++-...+.|.+.++...
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~ 503 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 503 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence 456788998854 45555555677888888642 2223333233557789998765 56666666788999998754
Q ss_pred CeeeEEeecceEeceEEEEECCC-CcEEEEEcCC-CeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCc
Q psy15417 95 QELAMYSHDNIICGITSVAFSRS-GRLLLAGYDD-FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSF 171 (176)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~g~~d-~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~ 171 (176)
....+.... . .....|+++|. +.++++-... ..|.+.++..................|++.+.+..| ++=...+.
T Consensus 504 ~~~~l~~~~-l-~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~ 581 (791)
T 3m0c_C 504 KRKTLFREN-G-SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 581 (791)
T ss_dssp SEEEEEECT-T-CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred eEEEEEeCC-C-CCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCc
Confidence 433332211 1 23557899987 4555554333 678888865444333333333456788888654443 33334445
Q ss_pred EEEe
Q psy15417 172 LRIW 175 (176)
Q Consensus 172 v~vw 175 (176)
|..+
T Consensus 582 I~~~ 585 (791)
T 3m0c_C 582 ISSI 585 (791)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5443
No 275
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.52 E-value=0.011 Score=43.02 Aligned_cols=135 Identities=11% Similarity=0.010 Sum_probs=78.0
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEEcCCCee-eeEe---------cCCCCCeeEEEEccCCcE-EEEeeCCCcEEEeeCCC-
Q psy15417 26 LSLAPDMRTFVSGACDASAKLWDIRDGSC-KQTF---------PGHESDINAVTFFPNGWA-FATGSDDATCRLFDIRA- 93 (176)
Q Consensus 26 ~~~~~~~~~l~s~s~dg~v~~wd~~~~~~-~~~~---------~~h~~~v~~v~~~~~~~~-l~s~s~d~~i~iwd~~~- 93 (176)
+...+++..+++-..++.|..+|..+++. +... ...-...+.+ +|++.. +++-...+.|..+++..
T Consensus 122 ~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~ 199 (306)
T 2p4o_A 122 ITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDST 199 (306)
T ss_dssp EEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTT
T ss_pred ccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCC
Confidence 33344444445544578888888876531 1100 0111234566 777754 45555667899999864
Q ss_pred CCe--eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeee--eecCCCccEEEEEEe---CCCCEEEEc
Q psy15417 94 DQE--LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG--ILAGHDNRVSCLGVT---EDGMAVATG 166 (176)
Q Consensus 94 ~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~---~~~~~l~tg 166 (176)
+.. ...+... .....++++++|.++++-...+.|.++|.. ++... .+........+++|. |++..|...
T Consensus 200 g~~~~~~~~~~~---~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt 275 (306)
T 2p4o_A 200 DKPGEPEIFVEQ---TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVV 275 (306)
T ss_dssp SCBCCCEEEEES---CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEE
T ss_pred CCCCccEEEecc---CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEE
Confidence 221 1111111 112347889999988888778899999954 54422 233333557889998 786655443
No 276
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.44 E-value=0.021 Score=43.17 Aligned_cols=149 Identities=6% Similarity=-0.030 Sum_probs=84.0
Q ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCc-EEEEeeCC-CcEEEeeCCCCCeeeEE
Q psy15417 24 MSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW-AFATGSDD-ATCRLFDIRADQELAMY 100 (176)
Q Consensus 24 ~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d-~~i~iwd~~~~~~~~~~ 100 (176)
..+++++.+. ++++-...+.|.+.+++.......+...-...+++++.|.+. .+++-... +.|...++.........
T Consensus 162 ~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~ 241 (386)
T 3v65_B 162 GGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA 241 (386)
T ss_dssp CCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred cEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE
Confidence 4577776444 445555567788888764433333333335678999998654 44544444 67887777543332222
Q ss_pred eecceEeceEEEEECCC-CcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417 101 SHDNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175 (176)
Q Consensus 101 ~~~~~~~~v~~~~~~~~-~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw 175 (176)
. .. ....+.++++|+ +.++++=...+.|..+|...................+++. ++..+++-...+.|..+
T Consensus 242 ~-~~-~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~ 314 (386)
T 3v65_B 242 D-TH-LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSA 314 (386)
T ss_dssp C-SS-CSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred E-CC-CCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEE
Confidence 1 11 123467899875 4555666667789999865433222222223344667774 34455555555566543
No 277
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.41 E-value=0.0015 Score=52.88 Aligned_cols=114 Identities=18% Similarity=0.235 Sum_probs=72.0
Q ss_pred EEEEcC-CCCEEEEEeCCC-----------eEEEEEcCCCee--eeEecC-CCCCeeEEEEccCCcEEEEeeC-CCcEEE
Q psy15417 25 SLSLAP-DMRTFVSGACDA-----------SAKLWDIRDGSC--KQTFPG-HESDINAVTFFPNGWAFATGSD-DATCRL 88 (176)
Q Consensus 25 ~~~~~~-~~~~l~s~s~dg-----------~v~~wd~~~~~~--~~~~~~-h~~~v~~v~~~~~~~~l~s~s~-d~~i~i 88 (176)
.+++.+ ++++++.|+.+. .+.+||..+++- +..+.. +.....++++.++++.++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 445666 888888887643 578999988752 223322 2333446778889999999985 457999
Q ss_pred eeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEc-CC-----CeEEEEeCCCce
Q psy15417 89 FDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY-DD-----FNCNVWDSMKTE 139 (176)
Q Consensus 89 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~-~d-----~~i~v~d~~~~~ 139 (176)
||..+.+ ............-.++.+.+++++++.|+ .+ ..+.+||..+.+
T Consensus 270 yd~~t~~-W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 270 YDSSSDS-WIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEGGGTE-EEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred ecCcCCc-eeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 9987542 22211111111112445667889998888 34 468899976654
No 278
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.41 E-value=0.013 Score=48.22 Aligned_cols=150 Identities=13% Similarity=0.112 Sum_probs=79.1
Q ss_pred EEEEEcCCCCEEEEEeCC-----CeEEEEEcCCCee--eeEecC-CCCCeeEEEEccCCcEEEEeeCC---CcEEEeeCC
Q psy15417 24 MSLSLAPDMRTFVSGACD-----ASAKLWDIRDGSC--KQTFPG-HESDINAVTFFPNGWAFATGSDD---ATCRLFDIR 92 (176)
Q Consensus 24 ~~~~~~~~~~~l~s~s~d-----g~v~~wd~~~~~~--~~~~~~-h~~~v~~v~~~~~~~~l~s~s~d---~~i~iwd~~ 92 (176)
..+.|+||++.|+....+ ..|..+++.++.. ...+.. ...-..++.|+|++++|+..+.+ ..+.++|+.
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 357899999877666655 2577888877642 223332 22345678999999876655432 347777876
Q ss_pred CCC-ee--eEEeecceEeceEEEEECCCCcEEEEEcCC----CeEEEEeCCCceeeee-ecCCCc--cEEEEEEeCCCCE
Q psy15417 93 ADQ-EL--AMYSHDNIICGITSVAFSRSGRLLLAGYDD----FNCNVWDSMKTERAGI-LAGHDN--RVSCLGVTEDGMA 162 (176)
Q Consensus 93 ~~~-~~--~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d----~~i~v~d~~~~~~~~~-~~~~~~--~i~~~~~~~~~~~ 162 (176)
++. .. ....... .....++.|+..+.+++....+ ..+..+++........ +..+.. .+..+++. .+..
T Consensus 304 ~~~~~~~~~~l~~~~-~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~l 381 (751)
T 2xe4_A 304 KGNAHNTLEIVRPRE-KGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYL 381 (751)
T ss_dssp SCTTCCCEEESSCCC-TTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEE
T ss_pred CCCCCceeEEeecCC-CCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEE
Confidence 542 11 2111111 1122345545445555555443 3566677653211122 223333 34444444 2334
Q ss_pred EEEccCCCcEEEe
Q psy15417 163 VATGSWDSFLRIW 175 (176)
Q Consensus 163 l~tg~~d~~v~vw 175 (176)
+++...++..++|
T Consensus 382 v~~~~~~g~~~l~ 394 (751)
T 2xe4_A 382 VVAGRRAGLTRIW 394 (751)
T ss_dssp EEEEEETTEEEEE
T ss_pred EEEEEeCCEEEEE
Confidence 5566666765554
No 279
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.40 E-value=0.041 Score=45.46 Aligned_cols=138 Identities=10% Similarity=0.089 Sum_probs=87.9
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec----CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417 20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP----GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95 (176)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~----~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 95 (176)
...|.++...+++..|..|+.++-+..||.++++...... .+...|.++...+++...+... +.+..||..+++
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~ 482 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--SALVRFNPEQRS 482 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--SCEEEEETTTTE
T ss_pred CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--CceeEEeCCCCe
Confidence 3578999988888856667777779999998876433221 1245688998888887555543 458888876543
Q ss_pred eeeEEeec----c-eEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec-------CCCccEEEEEEeCCCCEE
Q psy15417 96 ELAMYSHD----N-IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA-------GHDNRVSCLGVTEDGMAV 163 (176)
Q Consensus 96 ~~~~~~~~----~-~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l 163 (176)
. ..+... . ....+.++...+++.+.+... + -+..||..+.+. .+. .....|.++...++|...
T Consensus 483 ~-~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lW 557 (795)
T 4a2l_A 483 F-TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E-GLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIW 557 (795)
T ss_dssp E-EECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S-CEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEE
T ss_pred E-EEccccccccccCCceEEEEEECCCCCEEEEeC-C-ceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEE
Confidence 2 222211 0 113477888888888776654 4 477788655443 211 123468888888877654
Q ss_pred E
Q psy15417 164 A 164 (176)
Q Consensus 164 ~ 164 (176)
+
T Consensus 558 i 558 (795)
T 4a2l_A 558 V 558 (795)
T ss_dssp E
T ss_pred E
Confidence 3
No 280
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.40 E-value=0.041 Score=45.43 Aligned_cols=143 Identities=11% Similarity=0.055 Sum_probs=91.3
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecC--------CCCCeeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417 20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG--------HESDINAVTFFPNGWAFATGSDDATCRLFDI 91 (176)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~--------h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~ 91 (176)
...|.++...+++.+- .|+.++-+..||..+++....... ....|.+++..+++..+..|..++.+..+|.
T Consensus 356 ~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp CSSEEEEEECTTSCEE-EEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred CCeeEEEEECCCCCEE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeC
Confidence 4569999988887755 466676799999887754332211 1356889988888875666777778999998
Q ss_pred CCCCeeeEEeec---ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec------CCCccEEEEEEeCCCCE
Q psy15417 92 RADQELAMYSHD---NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA------GHDNRVSCLGVTEDGMA 162 (176)
Q Consensus 92 ~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~------~~~~~i~~~~~~~~~~~ 162 (176)
++++.. .+... .....|.++...+++.+.+... + -+..||..+++...... -....|.++...++|..
T Consensus 435 ~~~~~~-~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l 511 (795)
T 4a2l_A 435 NSGQVE-NFNQRNSQLVNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRL 511 (795)
T ss_dssp TTCCEE-EECTTTSCCSCSCEEEEEECSSSCEEEEES-S-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCE
T ss_pred CCCcEE-EeecCCCCcCCCeeEEEEECCCCCEEEEec-C-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCE
Confidence 765432 22210 0113477888888888666654 4 47788876654332211 12356888888887765
Q ss_pred EEEc
Q psy15417 163 VATG 166 (176)
Q Consensus 163 l~tg 166 (176)
.+..
T Consensus 512 Wigt 515 (795)
T 4a2l_A 512 WIGG 515 (795)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4433
No 281
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.37 E-value=0.023 Score=41.85 Aligned_cols=152 Identities=7% Similarity=-0.005 Sum_probs=87.9
Q ss_pred CeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCeee-eEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417 22 DVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCK-QTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRADQELA 98 (176)
Q Consensus 22 ~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~~~~-~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~ 98 (176)
....++|++.. .++.+-...+.|..++++.+... ..+...-....++++.+ .++.+++-...+.|.+.++.......
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 115 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV 115 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence 45688898854 45555556678888888765321 22222224567899987 56666776667889999986543322
Q ss_pred EEeecceEeceEEEEECCCC-cEEEEEc-CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCC-EEEEccCCCcEEEe
Q psy15417 99 MYSHDNIICGITSVAFSRSG-RLLLAGY-DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM-AVATGSWDSFLRIW 175 (176)
Q Consensus 99 ~~~~~~~~~~v~~~~~~~~~-~~l~~g~-~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~tg~~d~~v~vw 175 (176)
... .. ......++++|.+ .++.+-. ..+.|...+.............-..-..+++++++. .+.+=+..+.|..+
T Consensus 116 l~~-~~-~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~ 193 (318)
T 3sov_A 116 LFW-QE-LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKS 193 (318)
T ss_dssp EEC-SS-CSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEe-CC-CCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEE
Confidence 221 11 1234678888864 4444432 357788888543222222222233457889998544 44454555566554
No 282
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.36 E-value=0.02 Score=46.29 Aligned_cols=73 Identities=12% Similarity=0.133 Sum_probs=47.9
Q ss_pred CeEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCeeeeEecCCCCCe-eEEEEccCCcEEEEee-CC-----CcEEEeeCCC
Q psy15417 22 DVMSLSLAPDMRTFVSGAC-DASAKLWDIRDGSCKQTFPGHESDI-NAVTFFPNGWAFATGS-DD-----ATCRLFDIRA 93 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s~s~-dg~v~~wd~~~~~~~~~~~~h~~~v-~~v~~~~~~~~l~s~s-~d-----~~i~iwd~~~ 93 (176)
...++++..++++++.|+. +..+.+||..+++-...-..+...- -++++.++++.++.|+ .+ ..+.+||..+
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp SSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred ccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 3345677889999999985 4579999998775322111122221 3456667899988888 34 4688888764
Q ss_pred C
Q psy15417 94 D 94 (176)
Q Consensus 94 ~ 94 (176)
+
T Consensus 324 ~ 324 (656)
T 1k3i_A 324 K 324 (656)
T ss_dssp T
T ss_pred C
Confidence 3
No 283
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.28 E-value=0.0095 Score=47.91 Aligned_cols=141 Identities=10% Similarity=0.062 Sum_probs=84.8
Q ss_pred EEEEeCCCeEEEEEcCCCeeeeEecCCC----CCeeEEEEccCCcEEEEee-----CCCcEEEeeCCCCCeeeEEeecce
Q psy15417 35 FVSGACDASAKLWDIRDGSCKQTFPGHE----SDINAVTFFPNGWAFATGS-----DDATCRLFDIRADQELAMYSHDNI 105 (176)
Q Consensus 35 l~s~s~dg~v~~wd~~~~~~~~~~~~h~----~~v~~v~~~~~~~~l~s~s-----~d~~i~iwd~~~~~~~~~~~~~~~ 105 (176)
++.++.|+.+..+|.++|+.+....... ..+.+--...++..++.++ .++.|.-+|.++++.+..+.....
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~ 203 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGP 203 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSC
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCC
Confidence 7888889999999999999887765322 0122110112454443332 478999999999887655543221
Q ss_pred Eec-----------------------------------e-EEEEECCCCcEEEEEcCC----------------CeEEEE
Q psy15417 106 ICG-----------------------------------I-TSVAFSRSGRLLLAGYDD----------------FNCNVW 133 (176)
Q Consensus 106 ~~~-----------------------------------v-~~~~~~~~~~~l~~g~~d----------------~~i~v~ 133 (176)
... + ...++.++...++.+..+ ..+..+
T Consensus 204 ~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Al 283 (599)
T 1w6s_A 204 DKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGR 283 (599)
T ss_dssp HHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEE
T ss_pred ccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEE
Confidence 100 0 123455666666666554 378899
Q ss_pred eCCCceeeeeecC--CC--------ccEEEEEEe-CCC---CEEEEccCCCcEEEeC
Q psy15417 134 DSMKTERAGILAG--HD--------NRVSCLGVT-EDG---MAVATGSWDSFLRIWN 176 (176)
Q Consensus 134 d~~~~~~~~~~~~--~~--------~~i~~~~~~-~~~---~~l~tg~~d~~v~vwd 176 (176)
|..+++....++. |. ..+. +... .+| ..++.++.+|.+.++|
T Consensus 284 d~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD 339 (599)
T 1w6s_A 284 DADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLD 339 (599)
T ss_dssp ETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEE
T ss_pred eCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEE
Confidence 9998887766543 21 1121 2222 456 4677788888887764
No 284
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.25 E-value=0.0069 Score=42.46 Aligned_cols=141 Identities=11% Similarity=0.056 Sum_probs=79.1
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCee------eeEec--CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417 22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC------KQTFP--GHESDINAVTFFPNGWAFATGSDDATCRLFDIRA 93 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~------~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 93 (176)
.+..++|+|++.+.+. .+|.+.-.+..++.. -..+- +... -.++.|.|++.+.++ .||.|.-++..+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 5669999999886666 577666555544211 11111 1111 478899999988877 558887777533
Q ss_pred CC--ee----eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCcee-----eeeec--CCCccEEEEEEeCCC
Q psy15417 94 DQ--EL----AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER-----AGILA--GHDNRVSCLGVTEDG 160 (176)
Q Consensus 94 ~~--~~----~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~-----~~~~~--~~~~~i~~~~~~~~~ 160 (176)
.. .. .+.....- ..+..+.+.|+|.+.++. ++.++-........ ..... .......-+.|.+++
T Consensus 117 ~~~~~Wl~~a~~vg~~gw-~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G 193 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGW-SGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVG 193 (236)
T ss_dssp STTCCHHHHSEEEECSSG-GGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTS
T ss_pred CCCCceeccccEeccCCC-CceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCC
Confidence 21 11 11111000 246789999999988877 77754443221110 01111 222234556788888
Q ss_pred CEEEEccCCCcE
Q psy15417 161 MAVATGSWDSFL 172 (176)
Q Consensus 161 ~~l~tg~~d~~v 172 (176)
...+.- ++.+
T Consensus 194 ~l~~v~--~g~~ 203 (236)
T 1tl2_A 194 TLFGVQ--GGKF 203 (236)
T ss_dssp CEEEEE--TTEE
T ss_pred cEEEEe--CCeE
Confidence 766544 5543
No 285
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.23 E-value=0.043 Score=42.19 Aligned_cols=152 Identities=9% Similarity=0.006 Sum_probs=91.2
Q ss_pred eEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecC-CCCCeeEEEEccCCc-EEEEeeCCCcEEEeeCCCC--Ce-
Q psy15417 23 VMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPG-HESDINAVTFFPNGW-AFATGSDDATCRLFDIRAD--QE- 96 (176)
Q Consensus 23 V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~--~~- 96 (176)
...++++| ++.++++-..++.|..++...+........ .....+.++|+|+++ .+++-...+.|..++.... ..
T Consensus 228 p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~ 307 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLT 307 (430)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEC
T ss_pred ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCccccccc
Confidence 45678899 677777766778899999987764222222 123468899999998 4555556778988876432 11
Q ss_pred -eeEEe-e------cc------eEeceE-EEEE--------CCCCcEEEEEcCCCeEEEEeCCCceeeeeec-------C
Q psy15417 97 -LAMYS-H------DN------IICGIT-SVAF--------SRSGRLLLAGYDDFNCNVWDSMKTERAGILA-------G 146 (176)
Q Consensus 97 -~~~~~-~------~~------~~~~v~-~~~~--------~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~-------~ 146 (176)
...+. . .. ...... .+.+ .+++.++++=..+..|+.++ ..++...... +
T Consensus 308 ~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v~~~~g~g~~~~~G 386 (430)
T 3tc9_A 308 TPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRVTTFAGRGSNGTSG 386 (430)
T ss_dssp CCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEEEEEEECCTTSSSS
T ss_pred ceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcEEEEEeCCCCCCCc
Confidence 11111 0 00 000112 3444 24577777777788899998 4454322221 0
Q ss_pred ----------CCccEEEEEEeC-CCCEEEEccCCCcEEEe
Q psy15417 147 ----------HDNRVSCLGVTE-DGMAVATGSWDSFLRIW 175 (176)
Q Consensus 147 ----------~~~~i~~~~~~~-~~~~l~tg~~d~~v~vw 175 (176)
.-..-..+++.| ++.++++-..++.|+.+
T Consensus 387 ~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i 426 (430)
T 3tc9_A 387 YNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKI 426 (430)
T ss_dssp CBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred ccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEE
Confidence 012457899998 46666676667778765
No 286
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.21 E-value=0.039 Score=41.19 Aligned_cols=100 Identities=13% Similarity=0.208 Sum_probs=58.9
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeee--eEec---CCCCCeeEEEEccC----CcEEEEeeCC-----CcEE
Q psy15417 22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK--QTFP---GHESDINAVTFFPN----GWAFATGSDD-----ATCR 87 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~--~~~~---~h~~~v~~v~~~~~----~~~l~s~s~d-----~~i~ 87 (176)
.-..++|.|+++++++ ..+|.|.+++ .++.. ..+. ........++|+|+ +..+++-... +.|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 4568999999985555 5679999998 44421 1221 12356889999998 5555554432 5677
Q ss_pred EeeCCCCCe---eeEEe-ec---ceEeceEEEEECCCCcEEEEE
Q psy15417 88 LFDIRADQE---LAMYS-HD---NIICGITSVAFSRSGRLLLAG 124 (176)
Q Consensus 88 iwd~~~~~~---~~~~~-~~---~~~~~v~~~~~~~~~~~l~~g 124 (176)
.++...+.. ...+. .. ........++|.|+|.++++-
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 777654311 11111 11 100123478999999877764
No 287
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.20 E-value=0.033 Score=41.67 Aligned_cols=102 Identities=15% Similarity=0.178 Sum_probs=58.9
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe-eeeEec---CCCCCeeEEEEccC----CcEEEEeeC---C----Cc
Q psy15417 21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS-CKQTFP---GHESDINAVTFFPN----GWAFATGSD---D----AT 85 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~-~~~~~~---~h~~~v~~v~~~~~----~~~l~s~s~---d----~~ 85 (176)
..-..++|.|+++++++ ..+|.|.++| ..++ ....+. ........++++|+ +..+++-+. + +.
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 34578999999885554 5679999887 4454 222221 12346889999997 555555442 3 45
Q ss_pred EEEeeCCCCC-ee----eEEe-ec-ceEeceEEEEECCCCcEEEEE
Q psy15417 86 CRLFDIRADQ-EL----AMYS-HD-NIICGITSVAFSRSGRLLLAG 124 (176)
Q Consensus 86 i~iwd~~~~~-~~----~~~~-~~-~~~~~v~~~~~~~~~~~l~~g 124 (176)
|..++..... .+ ..+. .. ........+.|.|++.++++-
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITT 152 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEEC
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEE
Confidence 6667665431 11 1111 11 000123468999999877764
No 288
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.04 E-value=0.0031 Score=51.64 Aligned_cols=153 Identities=6% Similarity=-0.052 Sum_probs=82.4
Q ss_pred CeEEEEEcCCCCEEEEE-eCCCeEEEEEcCC----CeeeeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCCCCC
Q psy15417 22 DVMSLSLAPDMRTFVSG-ACDASAKLWDIRD----GSCKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRADQ 95 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s~-s~dg~v~~wd~~~----~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~~ 95 (176)
.+..++|++.+..|+.. ...+.|..+++.. ......+...-....++++.+ .++++++-...+.|.+.++....
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 34578888866655544 3457788888875 222222221122356788885 45566665667889999876543
Q ss_pred eeeEEeecceEeceEEEEECCCCc-EEEEEcCC-CeEEEEeCCCceeeeeecCCCccEEEEEEeCC-CCEEEEccCCCcE
Q psy15417 96 ELAMYSHDNIICGITSVAFSRSGR-LLLAGYDD-FNCNVWDSMKTERAGILAGHDNRVSCLGVTED-GMAVATGSWDSFL 172 (176)
Q Consensus 96 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d-~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~tg~~d~~v 172 (176)
........ . .....++++|.+. ++++-... +.|.+.++...............-..|+++|+ +.++++-+..+.|
T Consensus 487 ~~~l~~~~-~-~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I 564 (699)
T 1n7d_A 487 RKTLFREQ-G-SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 564 (699)
T ss_dssp EEEECCCS-S-CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEE
T ss_pred eEEEEeCC-C-CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeE
Confidence 32222211 1 1234678888654 44443222 67877775432221111112233456889876 4444555556667
Q ss_pred EEeC
Q psy15417 173 RIWN 176 (176)
Q Consensus 173 ~vwd 176 (176)
..+|
T Consensus 565 ~~~d 568 (699)
T 1n7d_A 565 SSID 568 (699)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6654
No 289
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.96 E-value=0.071 Score=39.90 Aligned_cols=144 Identities=15% Similarity=0.103 Sum_probs=79.2
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeee--eEec----CCCCCeeEEEEccC----CcEEEEee--CCCcEEE
Q psy15417 21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK--QTFP----GHESDINAVTFFPN----GWAFATGS--DDATCRL 88 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~--~~~~----~h~~~v~~v~~~~~----~~~l~s~s--~d~~i~i 88 (176)
..-+.|+|.|++.++++--..|.|++++...++.. ..+. ........++++|+ +..+++-+ .++.|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 44578999999997777655899999987665432 2221 22456889999985 55555432 3445555
Q ss_pred eeCCCCC--------eeeEEe-ecc-eEeceEEEEECCCCcEEEEEcC-------------CCeEEEEeCCCc-------
Q psy15417 89 FDIRADQ--------ELAMYS-HDN-IICGITSVAFSRSGRLLLAGYD-------------DFNCNVWDSMKT------- 138 (176)
Q Consensus 89 wd~~~~~--------~~~~~~-~~~-~~~~v~~~~~~~~~~~l~~g~~-------------d~~i~v~d~~~~------- 138 (176)
|.+...+ ....+. ... ....-..+.|.|++.++++.+. .+.|.-.+....
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf 191 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPF 191 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSS
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCC
Confidence 5544311 111111 110 0012346899999987777432 244444443221
Q ss_pred -eeeeeecCCCccEEEEEEeCCCCEEEE
Q psy15417 139 -ERAGILAGHDNRVSCLGVTEDGMAVAT 165 (176)
Q Consensus 139 -~~~~~~~~~~~~i~~~~~~~~~~~l~t 165 (176)
.....-.+|.+. ..++|.|++.+.++
T Consensus 192 ~~~~i~a~G~RNp-~Gla~dp~G~L~~~ 218 (347)
T 3das_A 192 PGSPVYSYGHRNV-QGLAWDDKQRLFAS 218 (347)
T ss_dssp TTCCEEEBCCSBC-CEEEECTTCCEEEE
T ss_pred CCCeEEeeCCCCc-ceEEECCCCCEEEE
Confidence 011111244444 46789888766543
No 290
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.95 E-value=0.071 Score=39.78 Aligned_cols=104 Identities=12% Similarity=0.142 Sum_probs=57.8
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec-------CCCCCeeEEEEccC----CcEEEEeeC-------
Q psy15417 21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP-------GHESDINAVTFFPN----GWAFATGSD------- 82 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-------~h~~~v~~v~~~~~----~~~l~s~s~------- 82 (176)
.....|+|.|+++.++.+...|.|++++.. ++....+. ........++++|+ +..+++-..
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 345789999999834455668999999853 33221111 12345789999995 655555433
Q ss_pred CCcEEEeeCCCCC-ee----eEEe-ec---ceEeceEEEEECCCCcEEEEEc
Q psy15417 83 DATCRLFDIRADQ-EL----AMYS-HD---NIICGITSVAFSRSGRLLLAGY 125 (176)
Q Consensus 83 d~~i~iwd~~~~~-~~----~~~~-~~---~~~~~v~~~~~~~~~~~l~~g~ 125 (176)
...|..+++..+. .+ ..+. .. ........+.|.|++.++++-+
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG 148 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence 2245556554321 11 1111 11 0001134689999997766643
No 291
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.90 E-value=0.081 Score=39.64 Aligned_cols=135 Identities=9% Similarity=0.148 Sum_probs=82.3
Q ss_pred CEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCC----c---EEEEeeC---CCcEEEeeCC-CCCeeeEEe
Q psy15417 33 RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG----W---AFATGSD---DATCRLFDIR-ADQELAMYS 101 (176)
Q Consensus 33 ~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~----~---~l~s~s~---d~~i~iwd~~-~~~~~~~~~ 101 (176)
.+++.....+-+.+||+ .|+.+..++. +.++.+.+.|+- + .+++..+ ++++.+|++. ....+....
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~ 117 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMT 117 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECS
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeecc
Confidence 45665666778999999 7888888864 678988888742 2 2344444 4789999773 222333321
Q ss_pred e-----cceEeceEEEEE--CCC-Cc-EEEEEcCCCeEEEEeCC-------CceeeeeecCCCccEEEEEEeCCCCEEEE
Q psy15417 102 H-----DNIICGITSVAF--SRS-GR-LLLAGYDDFNCNVWDSM-------KTERAGILAGHDNRVSCLGVTEDGMAVAT 165 (176)
Q Consensus 102 ~-----~~~~~~v~~~~~--~~~-~~-~l~~g~~d~~i~v~d~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~l~t 165 (176)
. ......+.-+++ +|. +. ++++...++.+..|++. ..+.+.++.- ...+..+.+.+....|..
T Consensus 118 ~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv 196 (355)
T 3amr_A 118 DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYI 196 (355)
T ss_dssp CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEE
T ss_pred ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEE
Confidence 1 000012222344 553 43 67777888999888862 2344555543 345667778877778878
Q ss_pred ccCCCc
Q psy15417 166 GSWDSF 171 (176)
Q Consensus 166 g~~d~~ 171 (176)
+-+|.-
T Consensus 197 ~eEd~G 202 (355)
T 3amr_A 197 AEEDEA 202 (355)
T ss_dssp EETTTE
T ss_pred ecccce
Confidence 877744
No 292
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.89 E-value=0.099 Score=40.52 Aligned_cols=105 Identities=12% Similarity=0.193 Sum_probs=59.8
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeee--eEecC------CCCCeeEEEEcc----CCcEEEEeeC------
Q psy15417 21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK--QTFPG------HESDINAVTFFP----NGWAFATGSD------ 82 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~--~~~~~------h~~~v~~v~~~~----~~~~l~s~s~------ 82 (176)
...+.|+|.|+++++++-...+.|.+++..+++.. ..+.. ....+..++|+| ++..+++-+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 34579999999997776544357888886655432 22321 235677999999 4555555542
Q ss_pred ------CCcEEEeeCCCCC-ee----eEEe-ecc-eEeceEEEEECCCCcEEEEEc
Q psy15417 83 ------DATCRLFDIRADQ-EL----AMYS-HDN-IICGITSVAFSRSGRLLLAGY 125 (176)
Q Consensus 83 ------d~~i~iwd~~~~~-~~----~~~~-~~~-~~~~v~~~~~~~~~~~l~~g~ 125 (176)
...|.-++..... .+ ..+. ... .......+.|.|+|.++++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 1244445543211 11 1111 110 001256899999998777644
No 293
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.88 E-value=0.14 Score=42.14 Aligned_cols=152 Identities=9% Similarity=0.056 Sum_probs=91.0
Q ss_pred CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec--CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe
Q psy15417 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP--GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE 96 (176)
Q Consensus 19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 96 (176)
....|.++...+++.+.+ |+.++-+..+|.++++...... .....|.++...+++...+. .. +.+..+|..+.+.
T Consensus 405 ~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~ 481 (781)
T 3v9f_A 405 LSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKKV 481 (781)
T ss_dssp CCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEE-ET-TEEEEEESSSSSC
T ss_pred CCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEE-EC-CceEEEeCCCCeE
Confidence 346788998887777555 6666678899988776433221 13467888888888865544 44 5688888766543
Q ss_pred eeEEeec---ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC---CCccEEEEEEeCCCCEEEEccCCC
Q psy15417 97 LAMYSHD---NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG---HDNRVSCLGVTEDGMAVATGSWDS 170 (176)
Q Consensus 97 ~~~~~~~---~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~tg~~d~ 170 (176)
....... .....+.++...+++.+.++...+| +..+|....+....... ....|.++...++|...+ |+.+|
T Consensus 482 ~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-~T~~G 559 (781)
T 3v9f_A 482 IHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWL-ATGEG 559 (781)
T ss_dssp CEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEE-EETTE
T ss_pred EecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEE-EECCC
Confidence 2221111 0013577888888888766554355 66788654433221111 234688888877776543 33355
Q ss_pred cEEEe
Q psy15417 171 FLRIW 175 (176)
Q Consensus 171 ~v~vw 175 (176)
-+..|
T Consensus 560 lv~~~ 564 (781)
T 3v9f_A 560 LVCFP 564 (781)
T ss_dssp EEEES
T ss_pred ceEEE
Confidence 43444
No 294
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.85 E-value=0.04 Score=42.42 Aligned_cols=111 Identities=19% Similarity=0.212 Sum_probs=75.6
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe------------eeeEecC------CCCCeeEEEEccC---CcEEEEe
Q psy15417 22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGS------------CKQTFPG------HESDINAVTFFPN---GWAFATG 80 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~------------~~~~~~~------h~~~v~~v~~~~~---~~~l~s~ 80 (176)
.|..+..+|+|.+|+..+ +.+|.+-.+..+. ..++++- ...+|..+-|||- +..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 466788999999998886 5578888876321 0112321 3577999999995 4589999
Q ss_pred eCCCcEEEeeCCCCC--ee------eEEeecceEeceEEEEECCCCcEEEEE--cCCCeEEEE
Q psy15417 81 SDDATCRLFDIRADQ--EL------AMYSHDNIICGITSVAFSRSGRLLLAG--YDDFNCNVW 133 (176)
Q Consensus 81 s~d~~i~iwd~~~~~--~~------~~~~~~~~~~~v~~~~~~~~~~~l~~g--~~d~~i~v~ 133 (176)
-.|+.|++||+.... +. ..++.......+.+++|.+++-.|.+. ..+|-|+-.
T Consensus 146 tsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 999999999986422 11 112222223567899999988766664 477777543
No 295
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.77 E-value=0.089 Score=39.42 Aligned_cols=123 Identities=10% Similarity=0.167 Sum_probs=77.4
Q ss_pred cCeEEEEE--cCC-CC-EEEEEeCCCeEEEEEcC-------CCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEe
Q psy15417 21 GDVMSLSL--APD-MR-TFVSGACDASAKLWDIR-------DGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF 89 (176)
Q Consensus 21 ~~V~~~~~--~~~-~~-~l~s~s~dg~v~~wd~~-------~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw 89 (176)
..++.+++ +|. +. +++....+|.+..|++. +.+.+++|... +.+..+...+....|+.+-++..|..+
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~~g~Lyv~eEd~GIw~~ 206 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDEYGRLYIAEEDEAIWKF 206 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETTTTEEEEEETTTEEEEE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCCCCeEEEecccceEEEE
Confidence 44556666 664 43 67788888999998882 34567777753 568889999888889999998776666
Q ss_pred eCCC-----CCeeeEEeecceEeceEEEEE--CCCCc-EE-EEEcCCCeEEEEeCC-Cceeeeee
Q psy15417 90 DIRA-----DQELAMYSHDNIICGITSVAF--SRSGR-LL-LAGYDDFNCNVWDSM-KTERAGIL 144 (176)
Q Consensus 90 d~~~-----~~~~~~~~~~~~~~~v~~~~~--~~~~~-~l-~~g~~d~~i~v~d~~-~~~~~~~~ 144 (176)
+.+. ...+...........+--+++ .++++ ++ ++.-.+.+..+||.. ..+.+..+
T Consensus 207 da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 207 SAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp ECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred eCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 6442 223333322222112333444 55555 44 555567799999975 45555554
No 296
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.77 E-value=0.096 Score=38.51 Aligned_cols=150 Identities=11% Similarity=0.041 Sum_probs=84.0
Q ss_pred eEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEe-eCCCcEEEeeCCCCCeeeE
Q psy15417 23 VMSLSLAPD-MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATG-SDDATCRLFDIRADQELAM 99 (176)
Q Consensus 23 V~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~-s~d~~i~iwd~~~~~~~~~ 99 (176)
...+++.+. +.++.+-...+.|.+++++.......+...-...+++++.|. +..+++- +..+.|...++........
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~ 160 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFII 160 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEE
Confidence 446788764 445555556678999998654333233333456789999986 4444443 2246787777754332222
Q ss_pred EeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417 100 YSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175 (176)
Q Consensus 100 ~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw 175 (176)
.. .. ....+.++++|++ .++++=...+.|..+|...........+....-..+++..+ ..+.+-...+.|..+
T Consensus 161 ~~-~~-l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~-~lywtd~~~~~V~~~ 234 (318)
T 3sov_A 161 IN-SE-IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILAC 234 (318)
T ss_dssp EC-SS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETT-EEEEEETTTTEEEEE
T ss_pred EE-CC-CCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCC-EEEEEecCCCeEEEE
Confidence 11 11 1234679999854 55566566788999987543222222222334456666543 344454455555543
No 297
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.72 E-value=0.19 Score=41.33 Aligned_cols=143 Identities=9% Similarity=0.058 Sum_probs=85.1
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEe---cCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe
Q psy15417 20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF---PGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE 96 (176)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~---~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 96 (176)
...|.++...+++.+. .|+.++-+..||..+++..... ......|.++...+++...+ |..++.+..+|.++++.
T Consensus 362 ~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~ 439 (781)
T 3v9f_A 362 NKVVSSVCDDGQGKLW-IGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKF 439 (781)
T ss_dssp SSCEEEEEECTTSCEE-EEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEE
T ss_pred CcceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcE
Confidence 3568999888877654 5555556888998765432211 12335688888887776544 66666788888765432
Q ss_pred eeEEeec-ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC-----CccEEEEEEeCCCCEEEEccC
Q psy15417 97 LAMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH-----DNRVSCLGVTEDGMAVATGSW 168 (176)
Q Consensus 97 ~~~~~~~-~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~tg~~ 168 (176)
..+... .....|.++...+++.+.+.. . +-+..+|..+++........ ...|.++...++|... .|+.
T Consensus 440 -~~~~~~~~~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW-igt~ 513 (781)
T 3v9f_A 440 -QIIELEKNELLDVRVFYEDKNKKIWIGT-H-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFW-IGTF 513 (781)
T ss_dssp -EECCSTTTCCCCEEEEEECTTSEEEEEE-T-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEE-EEES
T ss_pred -EEeccCCCCCCeEEEEEECCCCCEEEEE-C-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEE-EEEc
Confidence 222211 112357778888787766554 4 45788886654432221111 3568888888777654 3443
No 298
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.55 E-value=0.14 Score=37.48 Aligned_cols=151 Identities=14% Similarity=0.003 Sum_probs=85.2
Q ss_pred CeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCc-EEEEeeCC-CcEEEeeCCCCCeee
Q psy15417 22 DVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW-AFATGSDD-ATCRLFDIRADQELA 98 (176)
Q Consensus 22 ~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d-~~i~iwd~~~~~~~~ 98 (176)
....+++++.+. ++++-..++.|.+.+.+.......+...-...+++++.|.+. .+++-... +.|...++..... .
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~-~ 156 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-Y 156 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-E
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe-E
Confidence 346788886544 445556678899999875433333333335678999998644 44444332 6787777753322 2
Q ss_pred EEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCceeeeeec--CCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417 99 MYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILA--GHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175 (176)
Q Consensus 99 ~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw 175 (176)
...... ....+.++++|++ .++++-...+.|..+|........... ........+++.. +..+++-...+.|..+
T Consensus 157 ~~~~~~-~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~-~~ly~~d~~~~~V~~~ 234 (316)
T 1ijq_A 157 SLVTEN-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSA 234 (316)
T ss_dssp EEECSS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEE
T ss_pred EEEECC-CCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEEC-CEEEEEECCCCeEEEE
Confidence 221111 1235678999865 455555566789999975432211111 1223345667753 4455555555666554
No 299
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.46 E-value=0.19 Score=38.14 Aligned_cols=152 Identities=13% Similarity=0.034 Sum_probs=86.9
Q ss_pred cCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCC-cEEEEeeC-CCcEEEeeCCCCCee
Q psy15417 21 GDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WAFATGSD-DATCRLFDIRADQEL 97 (176)
Q Consensus 21 ~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~-d~~i~iwd~~~~~~~ 97 (176)
.....+++.+ .+.++.+-...+.|.+.+++.......+...-...+++++.|.+ .++++-.. .+.|...++......
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~ 238 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 238 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE
Confidence 3456788887 44455555567889999987654444444334557899999864 44444322 367888887644332
Q ss_pred eEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCceeeeeec--CCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417 98 AMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKTERAGILA--GHDNRVSCLGVTEDGMAVATGSWDSFLRI 174 (176)
Q Consensus 98 ~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~tg~~d~~v~v 174 (176)
.... .. ....+.+++++++. ++++=.....|..+|+.......... .....-..+++.. +..+++-...+.|..
T Consensus 239 ~~~~-~~-l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~-~~lywtd~~~~~V~~ 315 (400)
T 3p5b_L 239 SLVT-EN-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFS 315 (400)
T ss_dssp EEEC-SS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEET-TEEEEEESSSCSEEE
T ss_pred EEEE-CC-CCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeC-CEEEEecCCCCeEEE
Confidence 2221 11 12346789997655 44555566789999965433222222 1223345666643 344445555555654
Q ss_pred e
Q psy15417 175 W 175 (176)
Q Consensus 175 w 175 (176)
+
T Consensus 316 ~ 316 (400)
T 3p5b_L 316 A 316 (400)
T ss_dssp E
T ss_pred E
Confidence 3
No 300
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.42 E-value=0.032 Score=45.71 Aligned_cols=150 Identities=15% Similarity=0.049 Sum_probs=80.6
Q ss_pred eEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCc-EEEEeeCC-CcEEEeeCCCCCeeeE
Q psy15417 23 VMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW-AFATGSDD-ATCRLFDIRADQELAM 99 (176)
Q Consensus 23 V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d-~~i~iwd~~~~~~~~~ 99 (176)
...+++.+.+ .++++-...+.|.++++........+...-...+.+++.|.+. ++++-... +.|...++........
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l 534 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 534 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEE
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEE
Confidence 3457777544 4445545567899999875543333332234567899998644 44443222 6777777653322211
Q ss_pred EeecceEeceEEEEECCC-CcEEEEEcCCCeEEEEeCCCceeeeeec--CCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417 100 YSHDNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDSMKTERAGILA--GHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175 (176)
Q Consensus 100 ~~~~~~~~~v~~~~~~~~-~~~l~~g~~d~~i~v~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw 175 (176)
.. .. ....+.++++|+ +.++++=...+.|.+++........... ........+++..+ .++++-...+.|..+
T Consensus 535 ~~-~~-l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~ 610 (699)
T 1n7d_A 535 VT-EN-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSA 610 (699)
T ss_dssp SC-SS-CSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEE
T ss_pred Ee-CC-CCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEE
Confidence 11 11 112346889986 4566666677889999975432222211 11122234555544 344555555666654
No 301
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.37 E-value=0.26 Score=38.69 Aligned_cols=112 Identities=12% Similarity=0.159 Sum_probs=68.0
Q ss_pred cCeEEEEE-------cCCCCEEEEEeCCC-------eEEEEEcCC-Ceee-----eEecCCCCCeeEEEEcc-CCcEEEE
Q psy15417 21 GDVMSLSL-------APDMRTFVSGACDA-------SAKLWDIRD-GSCK-----QTFPGHESDINAVTFFP-NGWAFAT 79 (176)
Q Consensus 21 ~~V~~~~~-------~~~~~~l~s~s~dg-------~v~~wd~~~-~~~~-----~~~~~h~~~v~~v~~~~-~~~~l~s 79 (176)
.....++| ++++..|+.+...+ .|.+++... ++.. ..+... ....+++++| ++.++++
T Consensus 186 ~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvt 264 (496)
T 3kya_A 186 NRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFN 264 (496)
T ss_dssp SBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEE
T ss_pred CCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEE
Confidence 34788999 99998666665553 255665443 2221 122211 2346788999 4666777
Q ss_pred eeCCCcEEEeeCC-------CCCe-----------e-eEEeecceEeceEEEEECCCCcE-EEEEcCCCeEEEEe
Q psy15417 80 GSDDATCRLFDIR-------ADQE-----------L-AMYSHDNIICGITSVAFSRSGRL-LLAGYDDFNCNVWD 134 (176)
Q Consensus 80 ~s~d~~i~iwd~~-------~~~~-----------~-~~~~~~~~~~~v~~~~~~~~~~~-l~~g~~d~~i~v~d 134 (176)
-...+.|..+|+. ++.. . ..+..... .....++|+|++.. +++=..+..|+.++
T Consensus 265 d~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~-~~p~~ia~~p~G~~lYvaD~~~h~I~kid 338 (496)
T 3kya_A 265 SYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADP-SWEFQIFIHPTGKYAYFGVINNHYFMRSD 338 (496)
T ss_dssp ETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSS-SCCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ECCCCEEEEEecccccccccCceeecccccccccccceeEecCCC-CCceEEEEcCCCCEEEEEeCCCCEEEEEe
Confidence 7777889999986 3332 1 11211111 12357999999984 55656778888855
No 302
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.31 E-value=0.32 Score=39.20 Aligned_cols=153 Identities=7% Similarity=-0.008 Sum_probs=86.1
Q ss_pred cCeEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCee-eeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCCCCCee
Q psy15417 21 GDVMSLSLAPDMRTFVSG-ACDASAKLWDIRDGSC-KQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIRADQEL 97 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~-s~dg~v~~wd~~~~~~-~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~ 97 (176)
.....++|++.+..++-+ ...+.|..++++.... ...+...-....++++.+. ++.+++-...+.|.+.++......
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~ 119 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 119 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE
Confidence 456789999866655544 4467788888865432 2233332356889999985 556666667788999998654432
Q ss_pred eEEeecceEeceEEEEECCC-CcEEEEEc-CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCE-EEEccCCCcEEE
Q psy15417 98 AMYSHDNIICGITSVAFSRS-GRLLLAGY-DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMA-VATGSWDSFLRI 174 (176)
Q Consensus 98 ~~~~~~~~~~~v~~~~~~~~-~~~l~~g~-~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~tg~~d~~v~v 174 (176)
.... .. ......++++|. +.++.+-. ..+.|...++............-..-..+++.+++.. +++=+..+.|..
T Consensus 120 ~l~~-~~-l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~ 197 (619)
T 3s94_A 120 VLFW-QE-LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK 197 (619)
T ss_dssp EEEC-SS-CSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EEEe-CC-CCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEE
Confidence 2221 11 122446889886 44555532 2456766665432222222223345678899876444 344444555655
Q ss_pred e
Q psy15417 175 W 175 (176)
Q Consensus 175 w 175 (176)
+
T Consensus 198 ~ 198 (619)
T 3s94_A 198 S 198 (619)
T ss_dssp E
T ss_pred e
Confidence 4
No 303
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.28 E-value=0.23 Score=37.24 Aligned_cols=150 Identities=10% Similarity=0.169 Sum_probs=82.5
Q ss_pred EEEEEcCCCCEEEEE------------eCCCeEEEEEcCCC--ee-eeEecC-----CCCCeeEEEEcc--CCc-EEEEe
Q psy15417 24 MSLSLAPDMRTFVSG------------ACDASAKLWDIRDG--SC-KQTFPG-----HESDINAVTFFP--NGW-AFATG 80 (176)
Q Consensus 24 ~~~~~~~~~~~l~s~------------s~dg~v~~wd~~~~--~~-~~~~~~-----h~~~v~~v~~~~--~~~-~l~s~ 80 (176)
..+.+.|+|..++++ ..+|.|.++|.++. +. .-.+.+ ..-..-.+.+.+ ++. .|+.+
T Consensus 53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vv 132 (355)
T 3sre_A 53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV 132 (355)
T ss_dssp CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEE
T ss_pred ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEE
Confidence 456677877666665 26899999998742 21 112222 123566777766 343 34444
Q ss_pred -eC--CCcEEEeeCCCCCe-eeEE-eec-ceEeceEEEEECCCCcEEEEEc-----------------CCCeEEEEeCCC
Q psy15417 81 -SD--DATCRLFDIRADQE-LAMY-SHD-NIICGITSVAFSRSGRLLLAGY-----------------DDFNCNVWDSMK 137 (176)
Q Consensus 81 -s~--d~~i~iwd~~~~~~-~~~~-~~~-~~~~~v~~~~~~~~~~~l~~g~-----------------~d~~i~v~d~~~ 137 (176)
.. +.++.+|++..+.. .... ... ......+.+.+.++|.++++.. ..+.+.-+|.
T Consensus 133 nh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~-- 210 (355)
T 3sre_A 133 NHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP-- 210 (355)
T ss_dssp ECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--
T ss_pred ECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--
Confidence 32 35677877654322 1111 111 1224578899999999877753 1244555553
Q ss_pred ceeeeeecCCCccEEEEEEeCCCCEEE-EccCCCcEEEeC
Q psy15417 138 TERAGILAGHDNRVSCLGVTEDGMAVA-TGSWDSFLRIWN 176 (176)
Q Consensus 138 ~~~~~~~~~~~~~i~~~~~~~~~~~l~-tg~~d~~v~vwd 176 (176)
++.. .....-..-+.++|+|+++.+. +-+..+.|..|+
T Consensus 211 ~~~~-~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~ 249 (355)
T 3sre_A 211 NDVR-VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYE 249 (355)
T ss_dssp TCCE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEE
T ss_pred CeEE-EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEE
Confidence 2221 1211223457899999987654 444566776663
No 304
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.27 E-value=0.27 Score=37.91 Aligned_cols=142 Identities=14% Similarity=0.132 Sum_probs=87.4
Q ss_pred cCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCC----CCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe--------
Q psy15417 29 APDMRTFVSGACDASAKLWDIRDGSCKQTFPGH----ESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE-------- 96 (176)
Q Consensus 29 ~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h----~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~-------- 96 (176)
..++..++.+- ++.||.-++.....-+.++-. -..+..+..+|+|.+|+..+. ..|.+-.+..+..
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccc
Confidence 34555555544 466776676633222223222 235778999999998888865 5788877763221
Q ss_pred ----eeEEeecc----eEeceEEEEECCCC---cEEEEEcCCCeEEEEeCCCc--eeeeee---------cCCCccEEEE
Q psy15417 97 ----LAMYSHDN----IICGITSVAFSRSG---RLLLAGYDDFNCNVWDSMKT--ERAGIL---------AGHDNRVSCL 154 (176)
Q Consensus 97 ----~~~~~~~~----~~~~v~~~~~~~~~---~~l~~g~~d~~i~v~d~~~~--~~~~~~---------~~~~~~i~~~ 154 (176)
...+.... ...+|..+.|||-+ ..|++=..|++||+||+.+. ++. .+ ......+.++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEE
Confidence 11222221 12468899999964 57888889999999998752 122 11 1222567889
Q ss_pred EEeCCCCEEEE--ccCCCcEE
Q psy15417 155 GVTEDGMAVAT--GSWDSFLR 173 (176)
Q Consensus 155 ~~~~~~~~l~t--g~~d~~v~ 173 (176)
+|..++..|.. .+..|-|+
T Consensus 186 ~Fg~~~lTLYvl~~t~~GDIY 206 (452)
T 3pbp_A 186 EFSKDGLTLYCLNTTEGGDIF 206 (452)
T ss_dssp EECTTSSCEEEEECTTSCEEE
T ss_pred EEcCCCcEEEEEecCCCCCEE
Confidence 99988765544 55667664
No 305
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.27 E-value=0.087 Score=36.95 Aligned_cols=103 Identities=10% Similarity=0.022 Sum_probs=59.8
Q ss_pred CeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceE-----eceEEEEECCCCcEEEEEcCCCeEEEEeCCCc
Q psy15417 64 DINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNII-----CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT 138 (176)
Q Consensus 64 ~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~ 138 (176)
.+..++|+|++.+.+. .++.+.--+..+.+...-+.....+ .....+-|+|++.+.++ .|+.|+-++-.+.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 6789999999986666 5566555554332211100111000 01246889999998888 5688887774321
Q ss_pred eee-----eeecCC--CccEEEEEEeCCCCEEEEccCCCcE
Q psy15417 139 ERA-----GILAGH--DNRVSCLGVTEDGMAVATGSWDSFL 172 (176)
Q Consensus 139 ~~~-----~~~~~~--~~~i~~~~~~~~~~~l~tg~~d~~v 172 (176)
... ....+. -..+..+.|.|+|...+.. |+.+
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred CCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 110 111111 1357889999999887666 6554
No 306
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.20 E-value=0.37 Score=38.85 Aligned_cols=151 Identities=5% Similarity=-0.000 Sum_probs=86.5
Q ss_pred cCeEEEEEcCCCCE-EEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417 21 GDVMSLSLAPDMRT-FVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRADQELA 98 (176)
Q Consensus 21 ~~V~~~~~~~~~~~-l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~ 98 (176)
..+.+++|++.+.. +.+-...+.|.-++++.......+...-..+.++++.+ .++.+++-+..+.|.+.++.......
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~ 428 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKI 428 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEE
Confidence 34678999885544 44444577888888875433333333335678899986 46666766667889998886543322
Q ss_pred EEeecceEeceEEEEECCC-CcEEEEEc-CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCcEE
Q psy15417 99 MYSHDNIICGITSVAFSRS-GRLLLAGY-DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSFLR 173 (176)
Q Consensus 99 ~~~~~~~~~~v~~~~~~~~-~~~l~~g~-~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~v~ 173 (176)
... .. ......++++|. |.++.+-. ....|...++............-.+-..+++.++...| ++=+..+.|.
T Consensus 429 l~~-~~-l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~ 504 (619)
T 3s94_A 429 LIS-ED-LEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIE 504 (619)
T ss_dssp EEC-TT-CCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEE-CC-CCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEE
Confidence 221 11 124567999986 66666543 23567666644322222222233456778888754443 3333334443
No 307
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.13 E-value=0.23 Score=35.71 Aligned_cols=133 Identities=14% Similarity=0.224 Sum_probs=65.3
Q ss_pred CCCEEEEEeCCC-----eEEEEEcCCCeeee--EecCCCCCeeEEEEccCCcEEEEeeCC-------CcEEEeeCCCCCe
Q psy15417 31 DMRTFVSGACDA-----SAKLWDIRDGSCKQ--TFPGHESDINAVTFFPNGWAFATGSDD-------ATCRLFDIRADQE 96 (176)
Q Consensus 31 ~~~~l~s~s~dg-----~v~~wd~~~~~~~~--~~~~h~~~v~~v~~~~~~~~l~s~s~d-------~~i~iwd~~~~~~ 96 (176)
++++++.|+.++ .+..||..+.+-.. .++........+. -+++.++.|+.+ ..+..||+.++.
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~- 184 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV--VGGLLYAVGGYDVASRQCLSTVECYNATTNE- 184 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEETTTTEECCCEEEEETTTTE-
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE--ECCEEEEEeCCCCCCCccccEEEEEeCCCCc-
Confidence 567777777553 46788887764222 2221111112222 256677777643 347788876542
Q ss_pred eeEEe-ecceEeceEEEEECCCCcEEEEEcCC-----CeEEEEeCCCceee--eeecCCCccEEEEEEeCCCCEEEEccC
Q psy15417 97 LAMYS-HDNIICGITSVAFSRSGRLLLAGYDD-----FNCNVWDSMKTERA--GILAGHDNRVSCLGVTEDGMAVATGSW 168 (176)
Q Consensus 97 ~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d-----~~i~v~d~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~tg~~ 168 (176)
..... ..........+.+ ++.+++.|+.+ ..+.+||..+.+-. ..++....... ++.. ++..++.|+.
T Consensus 185 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~-~~~~-~~~i~v~GG~ 260 (302)
T 2xn4_A 185 WTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAG-VCAV-NGLLYVVGGD 260 (302)
T ss_dssp EEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCE-EEEE-TTEEEEECCB
T ss_pred EEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCe-EEEE-CCEEEEECCc
Confidence 22211 1111111222333 56777777654 36888997765322 22221111112 2222 5566777776
Q ss_pred CC
Q psy15417 169 DS 170 (176)
Q Consensus 169 d~ 170 (176)
++
T Consensus 261 ~~ 262 (302)
T 2xn4_A 261 DG 262 (302)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 308
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.08 E-value=0.24 Score=35.53 Aligned_cols=133 Identities=14% Similarity=0.169 Sum_probs=67.2
Q ss_pred CCCEEEEEeCC-----CeEEEEEcCCCee--eeEecCCCCCeeEEEEccCCcEEEEeeCC-----CcEEEeeCCCCCeee
Q psy15417 31 DMRTFVSGACD-----ASAKLWDIRDGSC--KQTFPGHESDINAVTFFPNGWAFATGSDD-----ATCRLFDIRADQELA 98 (176)
Q Consensus 31 ~~~~l~s~s~d-----g~v~~wd~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~d-----~~i~iwd~~~~~~~~ 98 (176)
++++++.|+.+ ..+.+||..+.+- +..++.....-..+. -+++.++.|+.+ ..+..+|+.+.. ..
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~-W~ 188 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGH-WT 188 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTE-EE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCc-EE
Confidence 56777777654 3578899887652 222222111112222 267777777754 357788876542 22
Q ss_pred EEe-ecceEeceEEEEECCCCcEEEEEcCC-----CeEEEEeCCCceee--eeecCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417 99 MYS-HDNIICGITSVAFSRSGRLLLAGYDD-----FNCNVWDSMKTERA--GILAGHDNRVSCLGVTEDGMAVATGSWDS 170 (176)
Q Consensus 99 ~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d-----~~i~v~d~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~tg~~d~ 170 (176)
... ..........+.+ ++.+++.|+.+ ..+.+||..+.+-. ..++.......+ +.. ++..++.|+.++
T Consensus 189 ~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~-~~~-~~~i~v~GG~~~ 264 (301)
T 2vpj_A 189 NVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGA-TVL-RGRLYAIAGYDG 264 (301)
T ss_dssp EECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEE-EEE-TTEEEEECCBCS
T ss_pred eCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeE-EEE-CCEEEEEcCcCC
Confidence 221 1111111222333 56777777654 45889997765432 222211112222 222 556667777653
No 309
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.07 E-value=0.44 Score=38.52 Aligned_cols=152 Identities=5% Similarity=-0.037 Sum_probs=89.1
Q ss_pred cCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417 21 GDVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIRADQELA 98 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~~ 98 (176)
..+..++|++....+ .+-..++.|..++++.......+...-....++++.+. ++.+++-...+.|.+.++.......
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~ 116 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV 116 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence 456789999865554 45556788888888754433333322245788999875 5556666666789988886543322
Q ss_pred EEeecceEeceEEEEECCC-CcEEEEEc-CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCcEEEe
Q psy15417 99 MYSHDNIICGITSVAFSRS-GRLLLAGY-DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSFLRIW 175 (176)
Q Consensus 99 ~~~~~~~~~~v~~~~~~~~-~~~l~~g~-~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~v~vw 175 (176)
... ... .....++++|. +.++.+-. ..+.|...++......... ........+++.+++..| ++=...+.|..+
T Consensus 117 l~~-~~l-~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~-~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~ 193 (628)
T 4a0p_A 117 LVW-KDL-DSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV-PNVGRANGLTIDYAKRRLYWTDLDTNLIESS 193 (628)
T ss_dssp EEC-SSC-CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEe-CCC-CCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE-CCCCCcceEEEccccCEEEEEECCCCEEEEE
Confidence 221 111 23467899985 55555532 2567777775443332222 233456788888865443 343444455443
No 310
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.87 E-value=0.081 Score=39.45 Aligned_cols=112 Identities=7% Similarity=0.027 Sum_probs=70.2
Q ss_pred CEEEEEeCCCeEEEEEcCCCeeeeEecCC-CCCeeEEEEc--c-CCcEEEEe-eCCCcEEEeeCCCCCeeeEEeecceEe
Q psy15417 33 RTFVSGACDASAKLWDIRDGSCKQTFPGH-ESDINAVTFF--P-NGWAFATG-SDDATCRLFDIRADQELAMYSHDNIIC 107 (176)
Q Consensus 33 ~~l~s~s~dg~v~~wd~~~~~~~~~~~~h-~~~v~~v~~~--~-~~~~l~s~-s~d~~i~iwd~~~~~~~~~~~~~~~~~ 107 (176)
.+++.++.||.+.-+|.++|+.+++++.. ..++....-. + ++..++.. ..||.+..++..++.....+......
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv- 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV- 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH-
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce-
Confidence 46889999999999999999999998754 1233221100 1 22333333 58999999998766333222221111
Q ss_pred ceEEEEEC-----------CCCcEEEEEcCCCeEEEEeCCCceeeeeec
Q psy15417 108 GITSVAFS-----------RSGRLLLAGYDDFNCNVWDSMKTERAGILA 145 (176)
Q Consensus 108 ~v~~~~~~-----------~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~ 145 (176)
....+... ..+..+++|+.++++...|+.+++.+..+.
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 00001110 134677899999999999999999888775
No 311
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.86 E-value=0.31 Score=35.05 Aligned_cols=132 Identities=14% Similarity=0.222 Sum_probs=65.4
Q ss_pred CCCEEEEEeCC------CeEEEEEcCCCeeee--EecCCCCCeeEEEEccCCcEEEEeeC---------CCcEEEeeCCC
Q psy15417 31 DMRTFVSGACD------ASAKLWDIRDGSCKQ--TFPGHESDINAVTFFPNGWAFATGSD---------DATCRLFDIRA 93 (176)
Q Consensus 31 ~~~~l~s~s~d------g~v~~wd~~~~~~~~--~~~~h~~~v~~v~~~~~~~~l~s~s~---------d~~i~iwd~~~ 93 (176)
++++++.|+.+ ..+.+||..+.+-.. .++.....-..+. -+++.++.|+. -..+.+||+.+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 56777777765 457889988775222 2221111112222 36667777764 23477888865
Q ss_pred CCeeeEEe-ecceEeceEEEEECCCCcEEEEEcCC-----CeEEEEeCCCcee--eeeecCCCccEEEEEEeCCCCEEEE
Q psy15417 94 DQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDD-----FNCNVWDSMKTER--AGILAGHDNRVSCLGVTEDGMAVAT 165 (176)
Q Consensus 94 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d-----~~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~t 165 (176)
.+ ..... .......-..+.+ ++.+++.|+.+ ..+.+||..+.+- +..++.......++ .. ++..++.
T Consensus 179 ~~-W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~-~~~i~v~ 253 (306)
T 3ii7_A 179 ET-WTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCA-AV-GSIVYVL 253 (306)
T ss_dssp TE-EEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEE-EE-TTEEEEE
T ss_pred Ce-EEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEE-EE-CCEEEEE
Confidence 42 22221 1111111222333 56777777643 3578899776532 22222211222222 22 5566677
Q ss_pred ccCC
Q psy15417 166 GSWD 169 (176)
Q Consensus 166 g~~d 169 (176)
|+.+
T Consensus 254 GG~~ 257 (306)
T 3ii7_A 254 AGFQ 257 (306)
T ss_dssp ECBC
T ss_pred eCcC
Confidence 7754
No 312
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.85 E-value=0.65 Score=38.65 Aligned_cols=150 Identities=15% Similarity=0.079 Sum_probs=83.7
Q ss_pred cCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEeeC-CCcEEEeeCCCCCee
Q psy15417 21 GDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSD-DATCRLFDIRADQEL 97 (176)
Q Consensus 21 ~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~-d~~i~iwd~~~~~~~ 97 (176)
.....|++.+.+. ++++-...+.|.+.+++.......+...-....+|++.|. +.++++-.. .+.|...++......
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~ 550 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 550 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE
Confidence 3455788887664 4555556788999998754433333333456889999997 444444322 267888887644332
Q ss_pred eEEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCceeeeeecC--CCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417 98 AMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILAG--HDNRVSCLGVTEDGMAVATGSWDSFLR 173 (176)
Q Consensus 98 ~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~tg~~d~~v~ 173 (176)
.... .. ....+.+++++.. .++++=.....|...++........... ....-..|++..+ .++++-...+.|.
T Consensus 551 ~lv~-~~-l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~-~lYwtD~~~~~I~ 626 (791)
T 3m0c_C 551 SLVT-EN-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIF 626 (791)
T ss_dssp EEEC-SS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT-EEEEEETTTTEEE
T ss_pred EEEe-CC-CCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC-EEEEEECCCCEEE
Confidence 2222 11 1235678888654 4555545667899998654333222222 1223345666443 3334444444444
No 313
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.54 E-value=0.42 Score=34.22 Aligned_cols=133 Identities=17% Similarity=0.174 Sum_probs=65.6
Q ss_pred CCCEEEEEeCC-----CeEEEEEcCCCe---e--eeEecCCCCCeeEEEEccCCcEEEEeeCCC-----cEEEeeCCCCC
Q psy15417 31 DMRTFVSGACD-----ASAKLWDIRDGS---C--KQTFPGHESDINAVTFFPNGWAFATGSDDA-----TCRLFDIRADQ 95 (176)
Q Consensus 31 ~~~~l~s~s~d-----g~v~~wd~~~~~---~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~-----~i~iwd~~~~~ 95 (176)
++.+++.|+.+ ..+.+||..+.+ - +..++.....-..+. -+++.++.|+.++ .+.++|+.+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 56777777755 358889987764 2 222221111122222 2677777776543 47778876543
Q ss_pred eeeEEeecceEeceEEEEECCCCcEEEEEcCC-----CeEEEEeCCCceeee--eecCCCccEEEEEEeCCCCEEEEccC
Q psy15417 96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDD-----FNCNVWDSMKTERAG--ILAGHDNRVSCLGVTEDGMAVATGSW 168 (176)
Q Consensus 96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d-----~~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~tg~~ 168 (176)
=............-..+.+ ++.+++.|+.+ ..+.+||..+.+-.. .++.......+ +.. ++..++.|+.
T Consensus 140 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~-~~~-~~~i~v~GG~ 215 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGV-ALL-NDHIYVVGGF 215 (301)
T ss_dssp EEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEE-EEE-TTEEEEECCB
T ss_pred EEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceE-EEE-CCEEEEEeCC
Confidence 1111111111111222333 66777777654 357888976653322 22211112222 222 4566677766
Q ss_pred C
Q psy15417 169 D 169 (176)
Q Consensus 169 d 169 (176)
+
T Consensus 216 ~ 216 (301)
T 2vpj_A 216 D 216 (301)
T ss_dssp C
T ss_pred C
Confidence 4
No 314
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.47 E-value=0.45 Score=34.18 Aligned_cols=133 Identities=14% Similarity=0.217 Sum_probs=66.3
Q ss_pred CCCEEEEEeCC----CeEEEEEcCCCeee--eEecCCCCCeeEEEEccCCcEEEEeeCC------CcEEEeeCCCCCeee
Q psy15417 31 DMRTFVSGACD----ASAKLWDIRDGSCK--QTFPGHESDINAVTFFPNGWAFATGSDD------ATCRLFDIRADQELA 98 (176)
Q Consensus 31 ~~~~l~s~s~d----g~v~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~d------~~i~iwd~~~~~~~~ 98 (176)
++.+++.|+.+ ..+..||..+.+-. ..++.....-..+ .-+++.++.|+.+ ..+.+||+.+.+ ..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~-W~ 131 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAAC--AAEGKIYTSGGSEVGNSALYLFECYDTRTES-WH 131 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEE--EETTEEEEECCBBTTBSCCCCEEEEETTTTE-EE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEE--EECCEEEEECCCCCCCcEeeeEEEEeCCCCc-eE
Confidence 56677777754 56788998887522 2222111111222 2267777777765 357788876543 22
Q ss_pred EEe-ecceEeceEEEEECCCCcEEEEEcC---------CCeEEEEeCCCceeee--eecCCCccEEEEEEeCCCCEEEEc
Q psy15417 99 MYS-HDNIICGITSVAFSRSGRLLLAGYD---------DFNCNVWDSMKTERAG--ILAGHDNRVSCLGVTEDGMAVATG 166 (176)
Q Consensus 99 ~~~-~~~~~~~v~~~~~~~~~~~l~~g~~---------d~~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~tg 166 (176)
... .......-..+.+ ++.+++.|+. -..+.+||..+.+-.. .++....... ++.. ++..++.|
T Consensus 132 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~-~~~i~v~G 207 (306)
T 3ii7_A 132 TKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHG-LVFV-KDKIFAVG 207 (306)
T ss_dssp EECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCE-EEEE-TTEEEEEC
T ss_pred eCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcce-EEEE-CCEEEEEe
Confidence 221 1111111122222 6677777653 3447889977653222 2221111112 2222 45666777
Q ss_pred cCCC
Q psy15417 167 SWDS 170 (176)
Q Consensus 167 ~~d~ 170 (176)
+.++
T Consensus 208 G~~~ 211 (306)
T 3ii7_A 208 GQNG 211 (306)
T ss_dssp CEET
T ss_pred CCCC
Confidence 6543
No 315
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.45 E-value=0.48 Score=34.28 Aligned_cols=132 Identities=12% Similarity=0.113 Sum_probs=64.0
Q ss_pred CCCEEEEEeCC--------CeEEEEEcCCCee--eeEecCCCCCeeEEEEccCCcEEEEeeC-C-----CcEEEeeCCCC
Q psy15417 31 DMRTFVSGACD--------ASAKLWDIRDGSC--KQTFPGHESDINAVTFFPNGWAFATGSD-D-----ATCRLFDIRAD 94 (176)
Q Consensus 31 ~~~~l~s~s~d--------g~v~~wd~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d-----~~i~iwd~~~~ 94 (176)
++.+++.|+.+ ..+.+||..+.+= +..++.. .-...+..-+++.++.|+. + ..+.++|+.+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYV--VYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSC--CBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCc--ccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 56667777642 4578899887642 2222211 1111222246677777776 2 35788887654
Q ss_pred CeeeEEe-ecceEeceEEEEECCCCcEEEEEcCCC-----eEEEEeCCCcee--eeeecCCCccEEEEEEeCCCCEEEEc
Q psy15417 95 QELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDF-----NCNVWDSMKTER--AGILAGHDNRVSCLGVTEDGMAVATG 166 (176)
Q Consensus 95 ~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d~-----~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~tg 166 (176)
. ..... .......-..+.+ ++.+++.|+.++ .+.+||..+.+- +..++....... ++.. ++..++.|
T Consensus 176 ~-W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~-~~~l~v~G 250 (315)
T 4asc_A 176 E-WKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLS-LVSL-VGTLYAIG 250 (315)
T ss_dssp E-EEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCE-EEEE-TTEEEEEE
T ss_pred e-EEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCccccee-EEEE-CCEEEEEC
Confidence 2 22211 1111111122333 567777776544 477888766532 222221111222 2222 45666677
Q ss_pred cCC
Q psy15417 167 SWD 169 (176)
Q Consensus 167 ~~d 169 (176)
+.+
T Consensus 251 G~~ 253 (315)
T 4asc_A 251 GFA 253 (315)
T ss_dssp EEE
T ss_pred Ccc
Confidence 653
No 316
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.17 E-value=0.57 Score=33.56 Aligned_cols=133 Identities=16% Similarity=0.257 Sum_probs=65.2
Q ss_pred CCCEEEEEeCC-----CeEEEEEcCCCeee--eEecCCCCCeeEEEEccCCcEEEEeeCCC-----cEEEeeCCCCCeee
Q psy15417 31 DMRTFVSGACD-----ASAKLWDIRDGSCK--QTFPGHESDINAVTFFPNGWAFATGSDDA-----TCRLFDIRADQELA 98 (176)
Q Consensus 31 ~~~~l~s~s~d-----g~v~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~d~-----~i~iwd~~~~~~~~ 98 (176)
++.+++.|+.+ ..+..||..+.+-. ..++.....-..+. -+++.++.|+.++ .+.+||+.+.+ ..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~-W~ 137 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNE-WF 137 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTE-EE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCe-Ee
Confidence 56777777754 35788998876522 22221111122222 2667777777653 46677876542 22
Q ss_pred EEe-ecceEeceEEEEECCCCcEEEEEcCC-------CeEEEEeCCCcee--eeeecCCCccEEEEEEeCCCCEEEEccC
Q psy15417 99 MYS-HDNIICGITSVAFSRSGRLLLAGYDD-------FNCNVWDSMKTER--AGILAGHDNRVSCLGVTEDGMAVATGSW 168 (176)
Q Consensus 99 ~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d-------~~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~tg~~ 168 (176)
... ..........+.+ ++.+++.|+.+ ..+.+||..+.+- +..++....... ++.. ++..++.|+.
T Consensus 138 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~-~~~iyv~GG~ 213 (302)
T 2xn4_A 138 HVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAG-VGVL-NNLLYAVGGH 213 (302)
T ss_dssp EECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCE-EEEE-TTEEEEECCB
T ss_pred ecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccccccc-EEEE-CCEEEEECCC
Confidence 211 1111111222222 56777776542 3478899766532 222222111222 2222 4566677766
Q ss_pred CC
Q psy15417 169 DS 170 (176)
Q Consensus 169 d~ 170 (176)
++
T Consensus 214 ~~ 215 (302)
T 2xn4_A 214 DG 215 (302)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 317
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.17 E-value=0.59 Score=33.71 Aligned_cols=133 Identities=14% Similarity=0.199 Sum_probs=66.1
Q ss_pred CCCEEEEEeCC-----CeEEEEEcCCCeee--eEecCCCCCeeEEEEccCCcEEEEeeCC-----CcEEEeeCCCCCeee
Q psy15417 31 DMRTFVSGACD-----ASAKLWDIRDGSCK--QTFPGHESDINAVTFFPNGWAFATGSDD-----ATCRLFDIRADQELA 98 (176)
Q Consensus 31 ~~~~l~s~s~d-----g~v~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~d-----~~i~iwd~~~~~~~~ 98 (176)
++++++.|+.+ ..+..||..+.+-. ..++.....-..+.+ +++.++.|+.+ ..+..+|+.+.+ ..
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~ 197 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNE-WR 197 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE-EE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCe-Ee
Confidence 56677776643 35788998876422 122211111222222 67777777664 357788876542 22
Q ss_pred EEe-ecceEeceEEEEECCCCcEEEEEcCC-----CeEEEEeCCCceeee--eecCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417 99 MYS-HDNIICGITSVAFSRSGRLLLAGYDD-----FNCNVWDSMKTERAG--ILAGHDNRVSCLGVTEDGMAVATGSWDS 170 (176)
Q Consensus 99 ~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d-----~~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~tg~~d~ 170 (176)
... .......-..+.+ ++.+++.|+.+ ..+.+||..+.+-.. .++...... +++.. ++..++.|+.++
T Consensus 198 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~i~v~GG~~~ 273 (308)
T 1zgk_A 198 MITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSAL-GITVH-QGRIYVLGGYDG 273 (308)
T ss_dssp ECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE-TTEEEEECCBCS
T ss_pred eCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccce-EEEEE-CCEEEEEcCcCC
Confidence 111 1111111223333 66777777654 458899977653322 222111122 22233 456777777543
No 318
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.79 E-value=0.76 Score=33.09 Aligned_cols=132 Identities=12% Similarity=0.158 Sum_probs=64.2
Q ss_pred CCCEEEEEeC----C-----CeEEEEEcCCCeee--eEecCCCCCeeEEEEccCCcEEEEeeCC-----CcEEEeeCCCC
Q psy15417 31 DMRTFVSGAC----D-----ASAKLWDIRDGSCK--QTFPGHESDINAVTFFPNGWAFATGSDD-----ATCRLFDIRAD 94 (176)
Q Consensus 31 ~~~~l~s~s~----d-----g~v~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~d-----~~i~iwd~~~~ 94 (176)
++.+++.|+. + ..+.+||..+.+-. ..++.....-..+.+ +++.++.|+.+ ..+.+||+.+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 5667777765 2 35788898876422 122211111222222 66777777644 35777887654
Q ss_pred CeeeEEe-ecceEeceEEEEECCCCcEEEEEcCC-----CeEEEEeCCCceeee--eecCCCccEEEEEEeCCCCEEEEc
Q psy15417 95 QELAMYS-HDNIICGITSVAFSRSGRLLLAGYDD-----FNCNVWDSMKTERAG--ILAGHDNRVSCLGVTEDGMAVATG 166 (176)
Q Consensus 95 ~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d-----~~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~tg 166 (176)
+ ..... .......-..+.+ ++.+++.|+.+ ..+.+||..+.+-.. .++.......+ +.. ++..++.|
T Consensus 148 ~-W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~-~~~-~~~iyv~G 222 (308)
T 1zgk_A 148 E-WHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGV-CVL-HNCIYAAG 222 (308)
T ss_dssp E-EEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEE-EEE-TTEEEEEC
T ss_pred e-EeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceE-EEE-CCEEEEEe
Confidence 2 21111 1111111222333 56777777654 357888876553222 22211112222 222 55666777
Q ss_pred cCC
Q psy15417 167 SWD 169 (176)
Q Consensus 167 ~~d 169 (176)
+.+
T Consensus 223 G~~ 225 (308)
T 1zgk_A 223 GYD 225 (308)
T ss_dssp CBC
T ss_pred CCC
Confidence 654
No 319
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.53 E-value=0.46 Score=38.03 Aligned_cols=101 Identities=14% Similarity=0.103 Sum_probs=63.1
Q ss_pred eeEEEEccCCcEEEEee-CCCcEEEeeCCCC------Ce-----eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEE
Q psy15417 65 INAVTFFPNGWAFATGS-DDATCRLFDIRAD------QE-----LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNV 132 (176)
Q Consensus 65 v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~~------~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v 132 (176)
.-++.++|+|++++.++ .+.++.++|.+.- .. ...-+.+ .-.+..-.+|.++|..+.+-.-|.++..
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEE
Confidence 44688999998876655 4788999997631 11 1111111 1123445789999977778889999999
Q ss_pred EeCCCc----------eeeeeecCCCccEEEEE-----EeCCCCEEEEc
Q psy15417 133 WDSMKT----------ERAGILAGHDNRVSCLG-----VTEDGMAVATG 166 (176)
Q Consensus 133 ~d~~~~----------~~~~~~~~~~~~i~~~~-----~~~~~~~l~tg 166 (176)
|++... ..+..+.-|++.-...+ -.++|++|++.
T Consensus 404 Wni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~l 452 (638)
T 3sbq_A 404 WNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVAL 452 (638)
T ss_dssp EEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEE
T ss_pred EeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEe
Confidence 997643 34445555655432111 14678888765
No 320
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.50 E-value=0.98 Score=33.04 Aligned_cols=141 Identities=13% Similarity=0.069 Sum_probs=73.7
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe---eee-EecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417 20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS---CKQ-TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95 (176)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~---~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 95 (176)
...+.++.|.+++..+++| .+|.|. .-.+.++ .+. ........+.++.|.+ +..++ ++.++.+.. ....++
T Consensus 35 ~~~~~~v~~~~~~~~~~~G-~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVG-VNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp SSCEEEEEESSSSCEEEEE-TTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTS
T ss_pred CCcEEEEEECCCCcEEEEc-CCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEE-ECCCCC
Confidence 3578999998777777754 567552 2233332 111 1111245688999976 44444 455565443 222333
Q ss_pred eeeEEeec-ceEeceEEEEECCCCcEEEEEcCCCeE-EEEeCC-CceeeeeecCCCccEEEEEEeCCCCEEEEccC
Q psy15417 96 ELAMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNC-NVWDSM-KTERAGILAGHDNRVSCLGVTEDGMAVATGSW 168 (176)
Q Consensus 96 ~~~~~~~~-~~~~~v~~~~~~~~~~~l~~g~~d~~i-~v~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~ 168 (176)
........ .....+..+.+.+++..++++. ++.+ +-.|-- +.+.. .......+..+++.+++.+++.+..
T Consensus 110 tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~DgG~tW~~~--~~~~~~~~~~~~~~~~~~~~~~g~~ 182 (327)
T 2xbg_A 110 SWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRTKDSGKNWQAL--VQEAIGVMRNLNRSPSGEYVAVSSR 182 (327)
T ss_dssp SCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEESSTTSSEEEE--ECSCCCCEEEEEECTTSCEEEEETT
T ss_pred CceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEEcCCCCCCEEe--ecCCCcceEEEEEcCCCcEEEEECC
Confidence 33322211 0111245566666677666664 4544 333311 12222 2234456888899988888776643
No 321
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.38 E-value=0.99 Score=32.61 Aligned_cols=132 Identities=14% Similarity=0.177 Sum_probs=62.7
Q ss_pred CCCEEEEEeCC-------CeEEEEEcCCCeeee--EecCCCCCeeEEEEccCCcEEEEeeCC------CcEEEeeCCCCC
Q psy15417 31 DMRTFVSGACD-------ASAKLWDIRDGSCKQ--TFPGHESDINAVTFFPNGWAFATGSDD------ATCRLFDIRADQ 95 (176)
Q Consensus 31 ~~~~l~s~s~d-------g~v~~wd~~~~~~~~--~~~~h~~~v~~v~~~~~~~~l~s~s~d------~~i~iwd~~~~~ 95 (176)
++++++.|+.+ ..+.+||..+.+=.. .++... -...+...+++.++.|+.+ ..+.++|+.+.+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKV--YGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCE--ESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcc--cccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 56677777654 246788887764221 122111 1111222467777777642 357888886542
Q ss_pred eeeEEe-ecceEeceEEEEECCCCcEEEEEcCC-----CeEEEEeCCCcee--eeeecCCCccEEEEEEeCCCCEEEEcc
Q psy15417 96 ELAMYS-HDNIICGITSVAFSRSGRLLLAGYDD-----FNCNVWDSMKTER--AGILAGHDNRVSCLGVTEDGMAVATGS 167 (176)
Q Consensus 96 ~~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d-----~~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~tg~ 167 (176)
..... ..........+.+ ++.+++.|+.+ ..+.+||..+.+- +..++....... ++.. ++..++.|+
T Consensus 187 -W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~-~~~i~v~GG 261 (318)
T 2woz_A 187 -WKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSIS-LVSL-AGSLYAIGG 261 (318)
T ss_dssp -EEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCE-EEEE-TTEEEEECC
T ss_pred -EEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceE-EEEE-CCEEEEECC
Confidence 22221 1111111122333 56777776543 2466888765432 222222212222 2222 456667776
Q ss_pred CC
Q psy15417 168 WD 169 (176)
Q Consensus 168 ~d 169 (176)
.+
T Consensus 262 ~~ 263 (318)
T 2woz_A 262 FA 263 (318)
T ss_dssp BC
T ss_pred ee
Confidence 54
No 322
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.34 E-value=1.1 Score=33.15 Aligned_cols=100 Identities=14% Similarity=0.090 Sum_probs=57.4
Q ss_pred CCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeec---ceEeceEEEEECCC----CcEEEEEcCC-----CeE
Q psy15417 63 SDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD---NIICGITSVAFSRS----GRLLLAGYDD-----FNC 130 (176)
Q Consensus 63 ~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~---~~~~~v~~~~~~~~----~~~l~~g~~d-----~~i 130 (176)
....+++|.|++..+++ ..++.|.+++ .++........ ........++++|+ +.++++-... ..|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 34678999999985555 5668999888 33211111110 11135678999998 4555544322 567
Q ss_pred EEEeCCCc-----eee-eeec-----CCCccEEEEEEeCCCCEEEEcc
Q psy15417 131 NVWDSMKT-----ERA-GILA-----GHDNRVSCLGVTEDGMAVATGS 167 (176)
Q Consensus 131 ~v~d~~~~-----~~~-~~~~-----~~~~~i~~~~~~~~~~~l~tg~ 167 (176)
..++.... +.+ ..++ .|. ...++|.|+|..+++-+
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~--~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHS--GGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCC--CCCEEECTTSCEEEECC
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcC--CceEEECCCCCEEEEEC
Confidence 77775432 112 1233 122 24689999997776644
No 323
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.17 E-value=1.2 Score=34.66 Aligned_cols=106 Identities=10% Similarity=0.042 Sum_probs=58.7
Q ss_pred CeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCe---eeeEecC---------CCCCeeEEEEccC----CcEEEEeeCC-
Q psy15417 22 DVMSLSLAPDMR-TFVSGACDASAKLWDIRDGS---CKQTFPG---------HESDINAVTFFPN----GWAFATGSDD- 83 (176)
Q Consensus 22 ~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~---~~~~~~~---------h~~~v~~v~~~~~----~~~l~s~s~d- 83 (176)
.-+.|+|.|++. .++.+...|.|++++..... .+..++. ....+..++|+|+ +..+++-+.+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 346899999986 45566788999999754221 1122211 1356889999996 5555554321
Q ss_pred -----------CcEEEeeCCCC----------CeeeEEeecceEeceEEEEECCCCcEEEEEcCC
Q psy15417 84 -----------ATCRLFDIRAD----------QELAMYSHDNIICGITSVAFSRSGRLLLAGYDD 127 (176)
Q Consensus 84 -----------~~i~iwd~~~~----------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d 127 (176)
..|.-|.+... +.+.........-.-..+.|.||+.++++.+..
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 12333444321 111111111101124579999999877775543
No 324
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.36 E-value=2.2 Score=33.02 Aligned_cols=105 Identities=12% Similarity=0.032 Sum_probs=57.4
Q ss_pred CeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecc------eEeceEEEEECCC----CcEEEEEcC-------
Q psy15417 64 DINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDN------IICGITSVAFSRS----GRLLLAGYD------- 126 (176)
Q Consensus 64 ~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~------~~~~v~~~~~~~~----~~~l~~g~~------- 126 (176)
...+++|.|+|..+++-...+.|.+++..++.......... ....+..++|+|+ +.++++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 46789999999877776544578887754433221111111 1245678999994 555554432
Q ss_pred -----CCeEEEEeCCC-------ceeee-eecC-CCccEEEEEEeCCCCEEEEccC
Q psy15417 127 -----DFNCNVWDSMK-------TERAG-ILAG-HDNRVSCLGVTEDGMAVATGSW 168 (176)
Q Consensus 127 -----d~~i~v~d~~~-------~~~~~-~~~~-~~~~i~~~~~~~~~~~l~tg~~ 168 (176)
...|.-++... .+.+. .+.. ..-....++|.|+|.++++.+.
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 12344444221 11121 1221 1123577999999987766443
No 325
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.88 E-value=1.9 Score=31.04 Aligned_cols=135 Identities=14% Similarity=0.148 Sum_probs=63.9
Q ss_pred cCCCCEEEEEeC-----C------CeEEEEEcCCCeee--eEecCCCCCeeEEEEccCCcEEEEeeCC--------CcEE
Q psy15417 29 APDMRTFVSGAC-----D------ASAKLWDIRDGSCK--QTFPGHESDINAVTFFPNGWAFATGSDD--------ATCR 87 (176)
Q Consensus 29 ~~~~~~l~s~s~-----d------g~v~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~d--------~~i~ 87 (176)
..++.+++.|+. . ..+..||..+.+-. ..++.....-..+.+ +++.++.|+.+ ..+.
T Consensus 43 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~ 120 (315)
T 4asc_A 43 TKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVM 120 (315)
T ss_dssp CTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEE
T ss_pred EECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEE
Confidence 357777777773 1 12667888876521 122211111112222 56677777742 3577
Q ss_pred EeeCCCCCeeeEEe-ecceEeceEEEEECCCCcEEEEEcC-C-----CeEEEEeCCCcee--eeeecCCCccEEEEEEeC
Q psy15417 88 LFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYD-D-----FNCNVWDSMKTER--AGILAGHDNRVSCLGVTE 158 (176)
Q Consensus 88 iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~-d-----~~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~ 158 (176)
++|+.+.+ ..... .+.....-..+. .++.+++.|+. + ..+.+||..+.+- +..++....... ++..
T Consensus 121 ~~d~~~~~-W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~- 195 (315)
T 4asc_A 121 CYDRLSFK-WGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFG-ATVH- 195 (315)
T ss_dssp EEETTTTE-EEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCE-EEEE-
T ss_pred EECCCCCc-EeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceE-EEEE-
Confidence 88876542 22211 111111112222 25677777765 2 3578888766432 222221111122 2222
Q ss_pred CCCEEEEccCCC
Q psy15417 159 DGMAVATGSWDS 170 (176)
Q Consensus 159 ~~~~l~tg~~d~ 170 (176)
++..++.|+.++
T Consensus 196 ~~~iyv~GG~~~ 207 (315)
T 4asc_A 196 DGRIIVAAGVTD 207 (315)
T ss_dssp TTEEEEEEEECS
T ss_pred CCEEEEEeccCC
Confidence 456666776544
No 326
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=92.41 E-value=2.5 Score=31.35 Aligned_cols=101 Identities=12% Similarity=0.022 Sum_probs=57.0
Q ss_pred CCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC-eeeEEee-cceEeceEEEEECCC----CcEEEEEcC---C----Ce
Q psy15417 63 SDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSH-DNIICGITSVAFSRS----GRLLLAGYD---D----FN 129 (176)
Q Consensus 63 ~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~-~~~~~~~-~~~~~~v~~~~~~~~----~~~l~~g~~---d----~~ 129 (176)
....+++|.|++..+++ ..++.|.+++. ++. .+..... .........++++|+ +.++++-.. + ..
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 34678999999985555 55689988873 333 1111110 011134678999997 555554332 2 45
Q ss_pred EEEEeCCCc-------eee-eeec---CCCccEEEEEEeCCCCEEEEcc
Q psy15417 130 CNVWDSMKT-------ERA-GILA---GHDNRVSCLGVTEDGMAVATGS 167 (176)
Q Consensus 130 i~v~d~~~~-------~~~-~~~~---~~~~~i~~~~~~~~~~~l~tg~ 167 (176)
|..++.... +.+ ..+. .|. ...++|.|+|.++++-+
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~--~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHN--GGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCC--CCCEEECTTSCEEEECC
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcC--CceEEECCCCcEEEEEC
Confidence 666664432 111 1122 232 24588999998777654
No 327
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=92.31 E-value=3.8 Score=33.11 Aligned_cols=149 Identities=13% Similarity=0.072 Sum_probs=83.7
Q ss_pred cCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCeeeeEe-cCCCCCeeEEEEcc-CCcEEEEeeCCC--cEEEeeCCCCC
Q psy15417 21 GDVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTF-PGHESDINAVTFFP-NGWAFATGSDDA--TCRLFDIRADQ 95 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~-~~h~~~v~~v~~~~-~~~~l~s~s~d~--~i~iwd~~~~~ 95 (176)
..+..+++...++.| .+-+..+.|.+.+++ |+....+ ...-...++++++| .+..+++-.... .|...++....
T Consensus 389 ~~p~glAvD~~~~nLY~td~~~~~I~v~~~~-G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~ 467 (628)
T 4a0p_A 389 IQPYDLSIDIYSRYIYWTCEATNVINVTRLD-GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTE 467 (628)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCS
T ss_pred CCcceEEeeccCCeEEEEcCCCCEEEEEECC-CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCC
Confidence 357789998876644 566667889999886 4433333 33446689999999 576666643333 45555654332
Q ss_pred eeeEEeecceEeceEEEEECCCCcEE-EEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417 96 ELAMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173 (176)
Q Consensus 96 ~~~~~~~~~~~~~v~~~~~~~~~~~l-~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~ 173 (176)
...... .. ....+.++++++...| .+=...+.|...++..................+++.. +..+.+=...+.|.
T Consensus 468 ~~~l~~-~~-l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r~~~~~~~~~~P~glav~~-~~ly~tD~~~~~i~ 543 (628)
T 4a0p_A 468 REVLFF-SG-LSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIVLEDSNILQPVGLTVFE-NWLYWIDKQQQMIE 543 (628)
T ss_dssp CEEEEC-SS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCEEEEEEET-TEEEEEETTTTEEE
T ss_pred cEEEEe-cc-CCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCceEEEEcCCCCCcEEEEEEC-CEEEEEECCCCeEE
Confidence 222222 11 1234678888875544 4444567898898643322222212233445667655 33444443344443
No 328
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=91.79 E-value=3.1 Score=31.01 Aligned_cols=104 Identities=13% Similarity=0.036 Sum_probs=59.6
Q ss_pred CCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeec----ceEeceEEEEECCC----CcEEEEEc--CCCeEEE
Q psy15417 63 SDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD----NIICGITSVAFSRS----GRLLLAGY--DDFNCNV 132 (176)
Q Consensus 63 ~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~----~~~l~~g~--~d~~i~v 132 (176)
....+++|.|++..+++--..|.|++++...+......... ........++++|+ +.++++-+ .+..|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 45689999999987777755899998876544322111111 11235778999995 55544322 3334544
Q ss_pred EeCCC----------ceeee-eec---CCCccEEEEEEeCCCCEEEEccC
Q psy15417 133 WDSMK----------TERAG-ILA---GHDNRVSCLGVTEDGMAVATGSW 168 (176)
Q Consensus 133 ~d~~~----------~~~~~-~~~---~~~~~i~~~~~~~~~~~l~tg~~ 168 (176)
|.... .+.+. .++ .|.. ..++|.|+|.++++.++
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g--~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNG--GRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCCC--CCEEECTTSCEEEECBC
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCccC--ccccCCCCCCEEEEECC
Confidence 54332 11111 222 2332 45889999987776543
No 329
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=91.12 E-value=5.4 Score=32.55 Aligned_cols=107 Identities=9% Similarity=0.153 Sum_probs=57.5
Q ss_pred CCCEEEEEeCCC------eEEEEEcCCCeee--eEecCCCCCeeEEEEccCCcEEEEeeCCC--cEEEeeCCCCCeeeEE
Q psy15417 31 DMRTFVSGACDA------SAKLWDIRDGSCK--QTFPGHESDINAVTFFPNGWAFATGSDDA--TCRLFDIRADQELAMY 100 (176)
Q Consensus 31 ~~~~l~s~s~dg------~v~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~d~--~i~iwd~~~~~~~~~~ 100 (176)
++++++.|+.++ .+.+||..+.+=. ..++..... -+++...+++.++.|+.++ .+.+||+.+.. ....
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~-W~~~ 528 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEI-FKDV 528 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTE-EEEC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCc-eEEc
Confidence 677777877543 4678888876421 112111111 1222324777888887755 68888886542 2222
Q ss_pred ee----cceEeceEEEEECCC-CcEEEEEcC--C-----CeEEEEeCCCce
Q psy15417 101 SH----DNIICGITSVAFSRS-GRLLLAGYD--D-----FNCNVWDSMKTE 139 (176)
Q Consensus 101 ~~----~~~~~~v~~~~~~~~-~~~l~~g~~--d-----~~i~v~d~~~~~ 139 (176)
.. ......-..+.+..+ +.+++.|+. + ..+.+||..+..
T Consensus 529 ~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 529 TPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred cCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 11 111111223445544 677777765 2 357888876654
No 330
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=90.42 E-value=4.4 Score=30.30 Aligned_cols=150 Identities=5% Similarity=0.015 Sum_probs=82.7
Q ss_pred cCeEEEEEcCCCCEEEEEe-------CCCeEEEEEcCCCeeeeEecCCCCCeeEEEEc--cCCcEEEE-eeC---CCcEE
Q psy15417 21 GDVMSLSLAPDMRTFVSGA-------CDASAKLWDIRDGSCKQTFPGHESDINAVTFF--PNGWAFAT-GSD---DATCR 87 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s-------~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~--~~~~~l~s-~s~---d~~i~ 87 (176)
..|..-..+++.+.++..+ -.|.+++|..+.. ..+.+.||.+.-..+.+. +....+++ +.. .+.+.
T Consensus 152 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLh 230 (365)
T 2xzh_A 152 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 230 (365)
T ss_dssp CEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEE
T ss_pred ceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEE
Confidence 4555666677777443322 2367789988765 356777776443333222 11222322 221 25788
Q ss_pred EeeCCCC-CeeeEE-------eecce---EeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEE
Q psy15417 88 LFDIRAD-QELAMY-------SHDNI---ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGV 156 (176)
Q Consensus 88 iwd~~~~-~~~~~~-------~~~~~---~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 156 (176)
+-++... .....+ .++.. .-+| ++..++.-.+++.-+.-|.+++||++++.++...+--.+.|...+.
T Consensus 231 IiEi~~~~~~~~~f~kk~vdi~fppea~~DFPV-amqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~ 309 (365)
T 2xzh_A 231 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV-AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAP 309 (365)
T ss_dssp EEECSSCCTTCCCCCCEEEEECCCTTCTTCCEE-EEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred EEEcCCCCCCCCCcccccceeeCCccccCCceE-EEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecc
Confidence 8887433 110001 01100 0022 3556666566667778899999999999888776655666665555
Q ss_pred eCCCCEEEEccCCCcE
Q psy15417 157 TEDGMAVATGSWDSFL 172 (176)
Q Consensus 157 ~~~~~~l~tg~~d~~v 172 (176)
.++..-+......|.|
T Consensus 310 ~~~~~Gi~~Vnr~GqV 325 (365)
T 2xzh_A 310 HEATAGIIGVNRKGQV 325 (365)
T ss_dssp EGGGTEEEEEETTCEE
T ss_pred cCCCCcEEEEcCCCEE
Confidence 4444445555566655
No 331
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=90.34 E-value=2 Score=31.47 Aligned_cols=49 Identities=10% Similarity=-0.031 Sum_probs=24.3
Q ss_pred CeEEEEEcCCCe--eeeEecCCCCCeeEEEEccCCcEEEEeeCC------CcEEEeeC
Q psy15417 42 ASAKLWDIRDGS--CKQTFPGHESDINAVTFFPNGWAFATGSDD------ATCRLFDI 91 (176)
Q Consensus 42 g~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d------~~i~iwd~ 91 (176)
..+.+||..+.+ .+..++.....-.+++. -+++.++.|+.+ ..+..+|+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEe
Confidence 468899998764 22223211111012222 256666666542 34566665
No 332
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=89.86 E-value=2.4 Score=31.43 Aligned_cols=101 Identities=13% Similarity=0.059 Sum_probs=53.5
Q ss_pred CeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEe-e----cceEeceEEEEECCC----CcEEEEEcC-------C
Q psy15417 64 DINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS-H----DNIICGITSVAFSRS----GRLLLAGYD-------D 127 (176)
Q Consensus 64 ~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~----~~~~~~v~~~~~~~~----~~~l~~g~~-------d 127 (176)
....++|.|++..++.+...+.|++++.. +.....+. . .........++++|+ +.++++-.. .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 46789999999834444567899888743 21110000 0 011124678999995 555555332 2
Q ss_pred CeEEEEeCCCc-------eee-eeec-----CCCccEEEEEEeCCCCEEEEcc
Q psy15417 128 FNCNVWDSMKT-------ERA-GILA-----GHDNRVSCLGVTEDGMAVATGS 167 (176)
Q Consensus 128 ~~i~v~d~~~~-------~~~-~~~~-----~~~~~i~~~~~~~~~~~l~tg~ 167 (176)
..|..++.... +.+ ..++ .|. -..++|.|+|.++++-+
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~--~~~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHF--GGRLVFDGKGYLFIALG 148 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCC--CCCEEECSSSEEEEEEC
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCccc--CccEEECCCCcEEEEEC
Confidence 24555554321 111 1121 132 24589999996665543
No 333
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=88.48 E-value=5.4 Score=28.64 Aligned_cols=106 Identities=10% Similarity=0.129 Sum_probs=52.8
Q ss_pred cCCCCEEEEEeC----CC-------eEEEEEcCCCeee--eEecCCCCCeeEEEEccCCcEEEEeeCC-------CcEEE
Q psy15417 29 APDMRTFVSGAC----DA-------SAKLWDIRDGSCK--QTFPGHESDINAVTFFPNGWAFATGSDD-------ATCRL 88 (176)
Q Consensus 29 ~~~~~~l~s~s~----dg-------~v~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~d-------~~i~i 88 (176)
..++.+++.|+. ++ .+..||..+.+-. ..++.....-..+.+ +++.++.|+.+ ..+.+
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~ 131 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLC 131 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEE
Confidence 456777888873 12 1677888776422 122211111122222 56777777754 24667
Q ss_pred eeCCCCCeeeEEe-ecceEeceEEEEECCCCcEEEEEcC------CCeEEEEeCCCce
Q psy15417 89 FDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYD------DFNCNVWDSMKTE 139 (176)
Q Consensus 89 wd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~------d~~i~v~d~~~~~ 139 (176)
+|+.+.+ ..... .+.....-..+. .++.+++.|+. -..+.+||..+.+
T Consensus 132 yd~~~~~-W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 132 YDPVAAK-WSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp EETTTTE-EEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred EeCCCCC-EeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 7776542 22211 111111122222 36677777753 2358889977653
No 334
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=87.27 E-value=11 Score=30.79 Aligned_cols=110 Identities=15% Similarity=0.164 Sum_probs=60.1
Q ss_pred CCCCEEEEEeCCC--eEEEEEcCCCeeee--E---ecCCCCCeeEEEEccC-CcEEEEeeCC-------CcEEEeeCCCC
Q psy15417 30 PDMRTFVSGACDA--SAKLWDIRDGSCKQ--T---FPGHESDINAVTFFPN-GWAFATGSDD-------ATCRLFDIRAD 94 (176)
Q Consensus 30 ~~~~~l~s~s~dg--~v~~wd~~~~~~~~--~---~~~h~~~v~~v~~~~~-~~~l~s~s~d-------~~i~iwd~~~~ 94 (176)
.++++++.|+.++ .+.+||..+.+=.. . ++.....-.++.+..+ ++.++.|+.+ ..+..||+.+.
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 3788888888765 68899998764211 1 1111122233455544 6777777662 34778898766
Q ss_pred Ce-----eeEEee-c-ceEeceEEEEECCCCcEEEEEcC--------CCeEEEEeCCCcee
Q psy15417 95 QE-----LAMYSH-D-NIICGITSVAFSRSGRLLLAGYD--------DFNCNVWDSMKTER 140 (176)
Q Consensus 95 ~~-----~~~~~~-~-~~~~~v~~~~~~~~~~~l~~g~~--------d~~i~v~d~~~~~~ 140 (176)
.- ...... . ........+.+ .++.+++.|+. ...+.+||..+.+-
T Consensus 579 ~w~~~~~W~~~~~~p~~~R~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 579 NATEPITVIKKLQHPLFQRYGSQIKYI-TPRKLLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp CSSCCEEEEEEEECGGGCCBSCEEEEE-ETTEEEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred ccccceEEEEcCCCCCCCcccceEEEe-CCCEEEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 51 222111 1 11111223333 23677777763 34588999876543
No 335
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=85.91 E-value=8.2 Score=28.09 Aligned_cols=52 Identities=23% Similarity=0.300 Sum_probs=28.3
Q ss_pred CCCEEEEEeC-C---------CeEEEEEcCCCeee--eEecCCCCCeeEEEEccCCcEEEEeeCC
Q psy15417 31 DMRTFVSGAC-D---------ASAKLWDIRDGSCK--QTFPGHESDINAVTFFPNGWAFATGSDD 83 (176)
Q Consensus 31 ~~~~l~s~s~-d---------g~v~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~d 83 (176)
++++++.|+. + ..+..||..+.+=. ..+. ........+...+++.++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA-PMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC-SSCCSSEEEEEETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC-CcccccceEEEECCEEEEEeCcC
Confidence 5667777765 2 45788998876421 1222 11112222223567788888765
No 336
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.34 E-value=2.1 Score=36.38 Aligned_cols=37 Identities=19% Similarity=0.343 Sum_probs=32.4
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEe
Q psy15417 22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF 58 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~ 58 (176)
.+.++...++..++++-+.|+++|+|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 5677888888899999999999999999999887754
No 337
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=84.99 E-value=5.2 Score=32.14 Aligned_cols=58 Identities=16% Similarity=0.244 Sum_probs=41.9
Q ss_pred EEEEcCCCCEEEEEeCC------------CeEEEEEcCCCeeeeEecCCC-CCeeEEEEccCCcEEEEeeC
Q psy15417 25 SLSLAPDMRTFVSGACD------------ASAKLWDIRDGSCKQTFPGHE-SDINAVTFFPNGWAFATGSD 82 (176)
Q Consensus 25 ~~~~~~~~~~l~s~s~d------------g~v~~wd~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~s~ 82 (176)
-|.|+|.|.+++.-..+ ..+.+.+..+++..+.+.++. ..++.++|+|+++.|+..-+
T Consensus 480 NL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred ceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEEE
Confidence 48899999866654432 235666777788777776653 67999999999987776643
No 338
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=83.34 E-value=23 Score=31.01 Aligned_cols=126 Identities=11% Similarity=0.039 Sum_probs=71.3
Q ss_pred EEEEEcCCCeeeeEecCCC-CCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCC-----
Q psy15417 44 AKLWDIRDGSCKQTFPGHE-SDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRS----- 117 (176)
Q Consensus 44 v~~wd~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~----- 117 (176)
|++.+......+..++... ..|...+... .+++.++ .+.+.++++..++ +...........+.|+++.|.
T Consensus 494 Irli~~~~~~~~~~w~~p~~~~I~~As~n~--~~vvva~-g~~l~~fel~~~~-L~~~~~~~l~~evscl~i~~~~~~~~ 569 (1158)
T 3ei3_A 494 VRLVSQEPKALVSEWKEPQAKNISVASCNS--SQVVVAV-GRALYYLQIHPQE-LRQISHTEMEHEVACLDITPLGDSNG 569 (1158)
T ss_dssp EEEEESSSCCEEEEECCTTCCCCCEEEECS--SEEEEEE-TTEEEEEEEETTE-EEEEEEEECSSCEEEEECCCCSSSTT
T ss_pred EEEEECCCCeEEEEEECCCCCEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCc-eeeecccCCCCceEEEEeecCCCCcc
Confidence 5666665544555665432 3566666543 3455554 5677777776543 222222112236788888763
Q ss_pred -CcEEEEEcC-CCeEEEEeCCCceeeeeecCC-CccEEEEEEe--CCCCEEEEccCCCcEE
Q psy15417 118 -GRLLLAGYD-DFNCNVWDSMKTERAGILAGH-DNRVSCLGVT--EDGMAVATGSWDSFLR 173 (176)
Q Consensus 118 -~~~l~~g~~-d~~i~v~d~~~~~~~~~~~~~-~~~i~~~~~~--~~~~~l~tg~~d~~v~ 173 (176)
..++++|.. |++++|+++...+.+....-. ......+.+. ....+|..|-.||.+.
T Consensus 570 ~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~ 630 (1158)
T 3ei3_A 570 LSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALF 630 (1158)
T ss_dssp CCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEE
T ss_pred cccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEE
Confidence 368888886 999999998765544432211 1122222221 3345777777777653
No 339
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=82.71 E-value=15 Score=28.62 Aligned_cols=150 Identities=5% Similarity=0.017 Sum_probs=85.7
Q ss_pred cCeEEEEEcCCCCEEEEEe-------CCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC--CcEEEE-eeC---CCcEE
Q psy15417 21 GDVMSLSLAPDMRTFVSGA-------CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN--GWAFAT-GSD---DATCR 87 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s-------~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s-~s~---d~~i~ 87 (176)
..|..-..+++.+.++..+ -.|.+++|..+.. ..+.+.||.+.-..+.+..+ ...+++ +.. .+.+.
T Consensus 151 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLh 229 (494)
T 1bpo_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 229 (494)
T ss_dssp CEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEE
T ss_pred ceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEE
Confidence 4565666677777554222 2467789988754 35677788654444333321 122322 222 26788
Q ss_pred EeeCCCC---C-ee----eEEeecce---EeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEE
Q psy15417 88 LFDIRAD---Q-EL----AMYSHDNI---ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGV 156 (176)
Q Consensus 88 iwd~~~~---~-~~----~~~~~~~~---~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 156 (176)
+-++... . .. ....++.. .-+| ++.+++.-.+++.-+.-|.+++||++++.++...+-....|...+.
T Consensus 230 i~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPv-amqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~ 308 (494)
T 1bpo_A 230 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV-AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAP 308 (494)
T ss_dssp EEECSCCCTTCCCCCCEEEECCCCTTSTTCCEE-EEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred EEEcCCCccCCCCccceeeeeeCCcccccCcee-EEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecc
Confidence 8887543 1 00 00001100 0022 4566666666777778899999999999887776655666666555
Q ss_pred eCCCCEEEEccCCCcE
Q psy15417 157 TEDGMAVATGSWDSFL 172 (176)
Q Consensus 157 ~~~~~~l~tg~~d~~v 172 (176)
.....-+......|.|
T Consensus 309 ~~~~~Gi~~Vnr~GqV 324 (494)
T 1bpo_A 309 HEATAGIIGVNRKGQV 324 (494)
T ss_dssp ETTTTEEEEEETTCEE
T ss_pred cCCCCcEEEEccCceE
Confidence 5554555555566655
No 340
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.36 E-value=2.5 Score=35.99 Aligned_cols=37 Identities=16% Similarity=0.172 Sum_probs=30.1
Q ss_pred CeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE
Q psy15417 64 DINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY 100 (176)
Q Consensus 64 ~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 100 (176)
.+.+++..++...+++.+.|+++|+|++.+++.+...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 3566777778889999999999999999988766543
No 341
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=81.02 E-value=8.9 Score=33.31 Aligned_cols=36 Identities=17% Similarity=0.177 Sum_probs=28.6
Q ss_pred eeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE
Q psy15417 65 INAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY 100 (176)
Q Consensus 65 v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 100 (176)
+.+++..++...+++-+.|+++|+|++.+++.+...
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 344556677789999999999999999988766543
No 342
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=79.39 E-value=17 Score=27.15 Aligned_cols=74 Identities=7% Similarity=0.001 Sum_probs=52.8
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417 21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 94 (176)
+--.++..++.-..++.-+.-|.+.+||+.++.++..-+-...+|-..+-..+..-++...+.|.+.--.+...
T Consensus 260 DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 260 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTT
T ss_pred CceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcc
Confidence 33446666666667777778899999999999998877766777766666656556777777777665555443
No 343
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=79.36 E-value=20 Score=27.77 Aligned_cols=104 Identities=12% Similarity=0.042 Sum_probs=56.7
Q ss_pred CeeEEEEccCCc-EEEEeeCCCcEEEeeCCCC---CeeeEEe--ec-----ceEeceEEEEECCC----CcEEEEEcC--
Q psy15417 64 DINAVTFFPNGW-AFATGSDDATCRLFDIRAD---QELAMYS--HD-----NIICGITSVAFSRS----GRLLLAGYD-- 126 (176)
Q Consensus 64 ~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~---~~~~~~~--~~-----~~~~~v~~~~~~~~----~~~l~~g~~-- 126 (176)
....++|.|++. .++.+.+.|.|++++.... ..+.... .. ....++..++|+|+ +.++++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 357899999985 3555567899999874321 1111111 10 01245778999996 455544322
Q ss_pred C----------CeEEEEeCCC----------ceeeeeec----CCCccEEEEEEeCCCCEEEEccCC
Q psy15417 127 D----------FNCNVWDSMK----------TERAGILA----GHDNRVSCLGVTEDGMAVATGSWD 169 (176)
Q Consensus 127 d----------~~i~v~d~~~----------~~~~~~~~----~~~~~i~~~~~~~~~~~l~tg~~d 169 (176)
+ ..|.-|.+.. .+.+..+. .|. -..++|.|||.++++.++.
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~--g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHL--GGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSC--EEEEEECTTSCEEEEECCT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCccc--CCcEeECCCCcEEEEeCCC
Confidence 1 1232244321 12222222 343 4678999999777665553
No 344
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=78.16 E-value=19 Score=28.89 Aligned_cols=63 Identities=13% Similarity=0.204 Sum_probs=44.2
Q ss_pred cCeEEEEEcCCCCEEEEEeC------------CCeEEEEEcCCCeeeeEecCC-CCCeeEEEEccCCcEEEEeeCC
Q psy15417 21 GDVMSLSLAPDMRTFVSGAC------------DASAKLWDIRDGSCKQTFPGH-ESDINAVTFFPNGWAFATGSDD 83 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~------------dg~v~~wd~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~s~d 83 (176)
.....|.|+++|.+.+.-.. ...|..++..+++....+.+. ...++.++|+||++.|+.+-+.
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEES
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEeC
Confidence 34567999999987773321 125677777788876666544 3568999999999887776543
No 345
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=77.93 E-value=2.4 Score=36.74 Aligned_cols=38 Identities=18% Similarity=0.329 Sum_probs=31.1
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec
Q psy15417 22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP 59 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~ 59 (176)
.+.++...++..++++-+.|+++|+|++.++.++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34456667788899999999999999999998877643
No 346
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=77.69 E-value=20 Score=26.77 Aligned_cols=142 Identities=10% Similarity=0.069 Sum_probs=78.9
Q ss_pred CeEEEEEcC--CCC-EEEEEeC---CCeEEEEEcCCC----eeeeEecCCC-CCeeEEEEccCCcEEEEeeC--------
Q psy15417 22 DVMSLSLAP--DMR-TFVSGAC---DASAKLWDIRDG----SCKQTFPGHE-SDINAVTFFPNGWAFATGSD-------- 82 (176)
Q Consensus 22 ~V~~~~~~~--~~~-~l~s~s~---dg~v~~wd~~~~----~~~~~~~~h~-~~v~~v~~~~~~~~l~s~s~-------- 82 (176)
....+++.+ ++. +|+.+.. +.++.+|++... ....++.+.. ...+.+.+.++|..+++...
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~ 192 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLK 192 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHH
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccc
Confidence 455666644 343 4444432 356777776542 2344555432 46899999999987766541
Q ss_pred ---------CCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEE-EcCCCeEEEEeCCC-cee--eeeecCCCc
Q psy15417 83 ---------DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLA-GYDDFNCNVWDSMK-TER--AGILAGHDN 149 (176)
Q Consensus 83 ---------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-g~~d~~i~v~d~~~-~~~--~~~~~~~~~ 149 (176)
.+.+..++. ++..... ......+.++|+||++.++. -+..++|..|++.. ++. ...+ ....
T Consensus 193 ~~e~~~~~~~g~vyr~d~--~~~~~~~---~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g 266 (355)
T 3sre_A 193 SWEMHLGLAWSFVTYYSP--NDVRVVA---EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDT 266 (355)
T ss_dssp HHHHHTTCCCEEEEEECT--TCCEEEE---EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSS
T ss_pred cchhhccCCccEEEEEEC--CeEEEee---cCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCC
Confidence 133333443 2211111 11123578999999976544 45678899998753 221 1122 1234
Q ss_pred cEEEEEEeC-CCCEEEEccCC
Q psy15417 150 RVSCLGVTE-DGMAVATGSWD 169 (176)
Q Consensus 150 ~i~~~~~~~-~~~~l~tg~~d 169 (176)
..-.+++.+ +|.+.+++.++
T Consensus 267 ~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 267 LVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEEEEECTTTCCEEEEEESC
T ss_pred CCceEEEeCCCCcEEEEecCC
Confidence 456677888 48777666544
No 347
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=76.90 E-value=38 Score=29.65 Aligned_cols=109 Identities=17% Similarity=0.129 Sum_probs=66.4
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEe-cCCCCCeeEEEEccC------CcEEEEeeC-CCcEEEeeCCC
Q psy15417 22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF-PGHESDINAVTFFPN------GWAFATGSD-DATCRLFDIRA 93 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~-~~h~~~v~~v~~~~~------~~~l~s~s~-d~~i~iwd~~~ 93 (176)
.|..++... ..++.++ .+.+.++++..++....- ..-...|.++++.|. +..++.|.+ |++++++++.+
T Consensus 515 ~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~ 591 (1158)
T 3ei3_A 515 NISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPS 591 (1158)
T ss_dssp CCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTT
T ss_pred EEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCC
Confidence 344444332 3444444 567777887765432211 112467999998763 367888887 99999999987
Q ss_pred CCeeeEEeecc--eEeceEEEEECCCCcEEEEEcCCCeEEEEe
Q psy15417 94 DQELAMYSHDN--IICGITSVAFSRSGRLLLAGYDDFNCNVWD 134 (176)
Q Consensus 94 ~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d 134 (176)
.+.+....... ....+.-+.+. ...+|.+|..||.+.-+.
T Consensus 592 l~~~~~~~L~~~~~p~si~l~~~~-~~~~L~igl~dG~l~~~~ 633 (1158)
T 3ei3_A 592 FELLHKEMLGGEIIPRSILMTTFE-SSHYLLCALGDGALFYFG 633 (1158)
T ss_dssp CCEEEEEECCSSCCEEEEEEEEET-TEEEEEEEETTSEEEEEE
T ss_pred CCeEEEEECCCCCCCcEEEEEEeC-CCcEEEEEeCCCeEEEEE
Confidence 66554433321 22334444442 346889999999875443
No 348
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=76.32 E-value=6.8 Score=32.31 Aligned_cols=36 Identities=14% Similarity=0.232 Sum_probs=28.7
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec
Q psy15417 22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP 59 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~ 59 (176)
.|.++.+ +..++++-+.|.++|+|+++++.++.+..
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 4665555 36799999999999999999998776544
No 349
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=76.04 E-value=19 Score=25.70 Aligned_cols=139 Identities=12% Similarity=0.045 Sum_probs=59.3
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-eeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE
Q psy15417 22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDG-SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY 100 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 100 (176)
.|..++--.....++ . ||.|..|-.+.. ++-.... ....|..++.-.. +.+.-. |+.+..|-....-++...
T Consensus 103 ~v~~ia~G~~hs~al--~-~G~v~~wG~n~~gqlg~~~~-~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gqlg~p 175 (282)
T 3qhy_B 103 GVDAIAAGAWASYAL--K-DGKVIAWGDDSDGQTTVPAE-AQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQTTVP 175 (282)
T ss_dssp SEEEEEEETTEEEEE--E-TTEEEEEECCTTSTTSCCGG-GGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTSTTSCC
T ss_pred CeEEEECcCCEEEEE--e-CCeEEEecCCCCCcCCCCcc-CCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCCCCCc
Confidence 566665443322222 3 788888865432 2111001 1234555544322 222223 678887754322111110
Q ss_pred eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417 101 SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175 (176)
Q Consensus 101 ~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw 175 (176)
... ...+..++.......++ .++.+..|-....-++..-......|..++....... +.. |+.+..|
T Consensus 176 ~~~--~~~v~~i~~G~~hs~al---~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~-al~--~g~v~~w 242 (282)
T 3qhy_B 176 AEA--QSGVDDVAGGIFHSLAL---KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSL-ALK--NGKVIAW 242 (282)
T ss_dssp GGG--GSSEEEEEECSSEEEEE---ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEE-EEE--TTEEEEE
T ss_pred eec--CCCeEEEEecCCEEEEE---ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEE-EEE--CCEEEEe
Confidence 000 12345555443333333 4888888863322111110011123445554443323 222 6777766
No 350
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=73.29 E-value=17 Score=29.35 Aligned_cols=66 Identities=21% Similarity=0.152 Sum_probs=46.1
Q ss_pred EEEEECCCCcEEEE-EcCCCeEEEEeCCCcee-------------eeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417 110 TSVAFSRSGRLLLA-GYDDFNCNVWDSMKTER-------------AGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175 (176)
Q Consensus 110 ~~~~~~~~~~~l~~-g~~d~~i~v~d~~~~~~-------------~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw 175 (176)
..+.++|||+++++ |-.+.++.++|.++-.. ..... -.-.-...+|.++|....|-..|.+|.-|
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvkW 404 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVKW 404 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEEE
Confidence 45778999987755 66788999999764211 11222 12234567899999777888899999988
Q ss_pred C
Q psy15417 176 N 176 (176)
Q Consensus 176 d 176 (176)
|
T Consensus 405 n 405 (638)
T 3sbq_A 405 N 405 (638)
T ss_dssp E
T ss_pred e
Confidence 5
No 351
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=71.47 E-value=60 Score=29.52 Aligned_cols=135 Identities=5% Similarity=0.067 Sum_probs=69.5
Q ss_pred cCeEEEEEcCCCCEEE-EE------eCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEc--cCCcEEEEeeC----CCcEE
Q psy15417 21 GDVMSLSLAPDMRTFV-SG------ACDASAKLWDIRDGSCKQTFPGHESDINAVTFF--PNGWAFATGSD----DATCR 87 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~-s~------s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~--~~~~~l~s~s~----d~~i~ 87 (176)
..|..-.-+++.+.++ +| .-.|.+++|..+.+. .+.+.||.+.-....+. +....+++-.. .+.+.
T Consensus 151 ~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLh 229 (1630)
T 1xi4_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 229 (1630)
T ss_pred CeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEE
Confidence 4455555677766544 22 235788899886543 44556665443333222 11222322111 26788
Q ss_pred EeeCCCC-C---eee------EEeecce-EeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEE
Q psy15417 88 LFDIRAD-Q---ELA------MYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGV 156 (176)
Q Consensus 88 iwd~~~~-~---~~~------~~~~~~~-~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 156 (176)
+-++... . ... .++.+.. .-+| ++..++.-.++..-+.-|.++++|++++.++-..+-....|...+.
T Consensus 230 i~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv-~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~ 308 (1630)
T 1xi4_A 230 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV-AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAP 308 (1630)
T ss_pred EEecCCCccCCCCCccccccccCCcccccCcce-EEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEecc
Confidence 8887432 1 100 0111000 0012 3556666556666678889999999998776554433444444443
Q ss_pred e
Q psy15417 157 T 157 (176)
Q Consensus 157 ~ 157 (176)
.
T Consensus 309 ~ 309 (1630)
T 1xi4_A 309 H 309 (1630)
T ss_pred C
Confidence 3
No 352
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=71.09 E-value=8.1 Score=31.85 Aligned_cols=29 Identities=7% Similarity=0.172 Sum_probs=24.2
Q ss_pred CCcEEEEeeCCCcEEEeeCCCCCeeeEEe
Q psy15417 73 NGWAFATGSDDATCRLFDIRADQELAMYS 101 (176)
Q Consensus 73 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 101 (176)
+..++++-+.|+++|+|++++++.+....
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 46799999999999999999887665443
No 353
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=70.89 E-value=36 Score=26.64 Aligned_cols=73 Identities=7% Similarity=-0.012 Sum_probs=53.3
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417 21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA 93 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 93 (176)
+--.++..++.-..++.-+.-|.+.+||+.++.++..-+-...+|-..+-..+..-++...+.|.|.--.+..
T Consensus 259 DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 259 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECT
T ss_pred CceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEcc
Confidence 3344677777777777888899999999999998887776667776666666666677777777766555543
No 354
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=67.28 E-value=31 Score=24.53 Aligned_cols=102 Identities=12% Similarity=0.083 Sum_probs=48.4
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-eeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE
Q psy15417 22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDG-SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY 100 (176)
Q Consensus 22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 100 (176)
.|..++--.. ..++. . ||.|..|-.+.. ++-.... ....|..++.-.... ++ -. |+.+..|-....-++..
T Consensus 25 ~i~~ia~G~~-h~~~l-~-~G~v~~wG~n~~Gqlg~p~~-~~~~i~~ia~G~~hs-~~-l~-~G~v~~wG~n~~Gqlg~- 96 (282)
T 3qhy_B 25 GVDAIAGGYF-HGLAL-K-GGKVLGWGANLNGQLTMPAA-TQSGVDAIAAGNYHS-LA-LK-DGEVIAWGGNEDGQTTV- 96 (282)
T ss_dssp SCCEEEECSS-EEEEE-E-TTEEEEEECCSSSTTSCCGG-GGSCCCEEEECSSEE-EE-EE-TTEEEEEECCTTSTTCC-
T ss_pred CCcEEEeCCC-eEEEE-E-CCEEEEEeCCCCCCCCCCcc-CCCCEEEEEeCCCEE-EE-EE-CCEEEEeeCCCCCCCCC-
Confidence 5666665433 23333 4 899999986542 1110001 123465565543322 22 24 88888886433222111
Q ss_pred eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeC
Q psy15417 101 SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135 (176)
Q Consensus 101 ~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~ 135 (176)
+.. ....|..++...+...++ . ++.+..|-.
T Consensus 97 P~~-~~~~v~~ia~G~~hs~al--~-~G~v~~wG~ 127 (282)
T 3qhy_B 97 PAE-ARSGVDAIAAGAWASYAL--K-DGKVIAWGD 127 (282)
T ss_dssp CGG-GSSSEEEEEEETTEEEEE--E-TTEEEEEEC
T ss_pred Ccc-cCCCeEEEECcCCEEEEE--e-CCeEEEecC
Confidence 100 012344555443333333 3 788888863
No 355
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=61.55 E-value=65 Score=26.24 Aligned_cols=145 Identities=11% Similarity=0.042 Sum_probs=74.5
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecC---CCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCee
Q psy15417 21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG---HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL 97 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~---h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~ 97 (176)
..|.++...+++.+-+.++..+-+..+|.++++....... ....+.++....+|...+.. .. -+..++.++....
T Consensus 472 ~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~~-Gl~~~~~~~~~~~ 549 (758)
T 3ott_A 472 MFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-HG-GVMRINPKDESQQ 549 (758)
T ss_dssp SCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-TT-EEEEECC--CCCC
T ss_pred ceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe-cC-ceEEEecCCCceE
Confidence 3588998888888776333334488889887764432211 12357778777778765543 44 4777776544321
Q ss_pred eEEeecce-EeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEe-CCCCEEEEccCCCcEE
Q psy15417 98 AMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVT-EDGMAVATGSWDSFLR 173 (176)
Q Consensus 98 ~~~~~~~~-~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~tg~~d~~v~ 173 (176)
.+..... ...+.++... ++.+.+++ .+| +..+|..+.+... ..-....+....+. ++| .|.-|+.+|-+.
T Consensus 550 -~~~~~gl~~~~i~~i~~~-~g~lWi~t-~~G-l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~G-~l~fG~~~Gl~~ 621 (758)
T 3ott_A 550 -SISFGSFSNNEILSMTCV-KNSIWVST-TNG-LWIIDRKTMDARQ-QNMTNKRFTSLLFDPKED-CVYLGGADGFGI 621 (758)
T ss_dssp -BCCCCC---CCEEEEEEE-TTEEEEEE-SSC-EEEEETTTCCEEE-C--CCCCCSEEEEETTTT-EEEEECBSEEEE
T ss_pred -EecccCCCccceEEEEEC-CCCEEEEC-CCC-eEEEcCCCceeEE-ecCCCCceeeeEEECCCC-cEEEecCCceEE
Confidence 1111111 1235556553 66554444 555 6677765543321 11111222233343 344 455666666554
No 356
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=56.27 E-value=77 Score=25.48 Aligned_cols=57 Identities=19% Similarity=0.263 Sum_probs=37.6
Q ss_pred EEEEECCCCcEEEEEcCC------------CeEEEEeCCCceeeeeecCCC-ccEEEEEEeCCCCEEEEc
Q psy15417 110 TSVAFSRSGRLLLAGYDD------------FNCNVWDSMKTERAGILAGHD-NRVSCLGVTEDGMAVATG 166 (176)
Q Consensus 110 ~~~~~~~~~~~l~~g~~d------------~~i~v~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~tg 166 (176)
--++|+|.|.++++-..+ ..+.+.+..+++....+..+. ..+..++|+|+++.|...
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 458899999977664322 234555655666555555543 368889999999877553
No 357
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=51.03 E-value=46 Score=24.60 Aligned_cols=66 Identities=9% Similarity=0.064 Sum_probs=39.8
Q ss_pred cEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEEC---CCCcEEEEE-cCCCeEEEEeCCCceee
Q psy15417 75 WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS---RSGRLLLAG-YDDFNCNVWDSMKTERA 141 (176)
Q Consensus 75 ~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~l~~g-~~d~~i~v~d~~~~~~~ 141 (176)
..++.++.||.+.-.|..+++....+..... .++....-. .++..++.. +.||.+..++...+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~-~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~ 80 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENF-QPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK 80 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGS-CCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCcc-CCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE
Confidence 4688889999999999888877655543310 111111100 122344443 68999999997776543
No 358
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=50.19 E-value=68 Score=23.04 Aligned_cols=125 Identities=10% Similarity=-0.028 Sum_probs=59.9
Q ss_pred EEEcCCCCEEEEEeCC--------------CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee--CCCc--EE
Q psy15417 26 LSLAPDMRTFVSGACD--------------ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS--DDAT--CR 87 (176)
Q Consensus 26 ~~~~~~~~~l~s~s~d--------------g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s--~d~~--i~ 87 (176)
-.+++++..++-+... ..|+..++..++.. .+.. .+ +..|++++..++=.. .++. |.
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~-~l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy 132 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGST-VLDP--DP--CIYASLIGNYIYYLHYDTQTATSLY 132 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCE-EEEC--SC--EEEEEEETTEEEEEEESSSSCEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcce-Eeec--CC--ccEEEEeCCEEEEEeecCCCCceEE
Confidence 3456777766555432 34666666655422 2321 11 235677776665544 3444 44
Q ss_pred EeeCCCCCeeeEEeecceEeceEEEEECCCCcEEE-EEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEc
Q psy15417 88 LFDIRADQELAMYSHDNIICGITSVAFSRSGRLLL-AGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATG 166 (176)
Q Consensus 88 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg 166 (176)
.-++...+........ + ..+++++..++ +.....+|.+-++..+.......+ ... .++.|++.+|+-.
T Consensus 133 ~~~~dGs~~~~lt~~~-----~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~---~~~-~~~~P~g~~iy~t 201 (302)
T 3s25_A 133 RIRIDGEEKKKIKNHY-----L--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC---NCY-KPVVLDDTNVYYM 201 (302)
T ss_dssp EEETTSCCCEEEESSC-----C--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS---CEE-EEEEEETTEEEEE
T ss_pred EEECCCCCeEEEeCCC-----c--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC---Ccc-ceeeecCCEEEEE
Confidence 4455433322221111 1 23455666554 433356788888665544333322 111 2355766666533
No 359
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=41.61 E-value=1.4e+02 Score=24.51 Aligned_cols=56 Identities=11% Similarity=0.140 Sum_probs=38.1
Q ss_pred CEEEEEeCCCeEE-EEEcCCCe-------eeeEec--CCCCCeeEEEEccCCcEEEEeeCCCcEEE
Q psy15417 33 RTFVSGACDASAK-LWDIRDGS-------CKQTFP--GHESDINAVTFFPNGWAFATGSDDATCRL 88 (176)
Q Consensus 33 ~~l~s~s~dg~v~-~wd~~~~~-------~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~~i~i 88 (176)
..++.|+.+|.|+ +.-...+. .+..++ ....+|..+.++++..+|+.++..+-+++
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 3688999999974 54332221 122222 35678999999999999999988876665
No 360
>1s28_A ORF1; type III chaperone; 3.00A {Pseudomonas syringae PV} SCOP: d.198.1.1
Probab=40.40 E-value=15 Score=22.98 Aligned_cols=40 Identities=10% Similarity=-0.003 Sum_probs=25.0
Q ss_pred ccccccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEE
Q psy15417 5 LDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAK 45 (176)
Q Consensus 5 ~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~ 45 (176)
+.+.+-+.+.+-.-|+..|+|..|. +=..=+-++..|-|.
T Consensus 14 laK~Y~mP~~P~kkhe~eVYcf~F~-~i~i~iy~d~~rwvy 53 (132)
T 1s28_A 14 LAKDYGMPGFPEKKHEHEVYCFEFK-EVSIRIYQDKFKWVY 53 (132)
T ss_dssp HHHHHCCCBCCCCCSTTCCEEEEEG-GGTEEEEECTTSEEE
T ss_pred HHHhcCCCCCCcccccCceEEEEEC-CEEEEEeecCCcEEE
Confidence 3344446666666689999999997 544444455555443
No 361
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=37.82 E-value=1.6e+02 Score=23.76 Aligned_cols=59 Identities=17% Similarity=0.249 Sum_probs=39.0
Q ss_pred ceEEEEECCCCcEEEEEcC------------CCeEEEEeCCCceeeeeecCC-CccEEEEEEeCCCCEEEEc
Q psy15417 108 GITSVAFSRSGRLLLAGYD------------DFNCNVWDSMKTERAGILAGH-DNRVSCLGVTEDGMAVATG 166 (176)
Q Consensus 108 ~v~~~~~~~~~~~l~~g~~------------d~~i~v~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~tg 166 (176)
....+.|+++|.+.++... +..+..++..+++....+... ...++.++|+||++.|...
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 4567899999988774321 124556665566655444433 3467899999999887654
No 362
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=31.72 E-value=1.4e+02 Score=21.33 Aligned_cols=102 Identities=9% Similarity=-0.078 Sum_probs=50.8
Q ss_pred EEEcCCCCEEEEEe--CC--CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEE-EeeCCCcEEEeeCCCCCeeeEE
Q psy15417 26 LSLAPDMRTFVSGA--CD--ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA-TGSDDATCRLFDIRADQELAMY 100 (176)
Q Consensus 26 ~~~~~~~~~l~s~s--~d--g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~d~~i~iwd~~~~~~~~~~ 100 (176)
..|++++..++-.. .+ ..|..-+++... ...+..+.. ..+.+++..|+ +......|..-++.........
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~ 183 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFY 183 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEE
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEe
Confidence 35677777666554 23 334444554333 334443322 34567766655 4433567777777655433332
Q ss_pred eecceEeceEEEEECCCCcEEEEEcCC--CeEEEEeCCCc
Q psy15417 101 SHDNIICGITSVAFSRSGRLLLAGYDD--FNCNVWDSMKT 138 (176)
Q Consensus 101 ~~~~~~~~v~~~~~~~~~~~l~~g~~d--~~i~v~d~~~~ 138 (176)
. .. . ...++|++..++-.... ..|..-++...
T Consensus 184 ~--~~---~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~ 217 (302)
T 3s25_A 184 D--CN---C-YKPVVLDDTNVYYMDVNRDNAIVHVNINNP 217 (302)
T ss_dssp C--SC---E-EEEEEEETTEEEEEEGGGTTEEEEECSSSC
T ss_pred C--CC---c-cceeeecCCEEEEEEcCCCcEEEEEECCCC
Confidence 2 11 1 12345777665443322 35656565443
No 363
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=30.76 E-value=1.9e+02 Score=22.62 Aligned_cols=56 Identities=13% Similarity=0.099 Sum_probs=36.0
Q ss_pred cEEEEEcCCCeEEEEeCC-Cce-------eeeeec--CCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417 119 RLLLAGYDDFNCNVWDSM-KTE-------RAGILA--GHDNRVSCLGVTEDGMAVATGSWDSFLRI 174 (176)
Q Consensus 119 ~~l~~g~~d~~i~v~d~~-~~~-------~~~~~~--~~~~~i~~~~~~~~~~~l~tg~~d~~v~v 174 (176)
.+++.|+.+|.++-.-+. ... .+..+. ....+|..|.++++..+|..++.++-++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 467889999987543322 211 111222 23467889999999999999988876664
No 364
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=28.54 E-value=2e+02 Score=22.76 Aligned_cols=70 Identities=14% Similarity=0.013 Sum_probs=41.2
Q ss_pred CeeEEEEccC--CcEEEEeeCCCcEEEeeCCCCCe----eeEEeecceEeceE-EEEECCCCcEEEEEcCCCeEEEE
Q psy15417 64 DINAVTFFPN--GWAFATGSDDATCRLFDIRADQE----LAMYSHDNIICGIT-SVAFSRSGRLLLAGYDDFNCNVW 133 (176)
Q Consensus 64 ~v~~v~~~~~--~~~l~s~s~d~~i~iwd~~~~~~----~~~~~~~~~~~~v~-~~~~~~~~~~l~~g~~d~~i~v~ 133 (176)
.+++|+.... -..++.|..+|.|.-..+..+.. ...........+|. .+.++++...|++++.++.++|-
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kvp 477 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRVP 477 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEeccccceee
Confidence 3555655543 34588888999876655543221 11112111113454 67788988999998887766653
No 365
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=27.16 E-value=2.3e+02 Score=26.09 Aligned_cols=67 Identities=7% Similarity=0.001 Sum_probs=40.8
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEee
Q psy15417 24 MSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFD 90 (176)
Q Consensus 24 ~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd 90 (176)
.++..++.-..+..-+.-|.+.++|+.|+.++..-+-...+|--.+-.+...-++...+.|.|---.
T Consensus 262 v~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~ 328 (1630)
T 1xi4_A 262 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVC 328 (1630)
T ss_pred eEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEE
Confidence 3566666666677777789999999999987765444444454444443333444444555444333
No 366
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=27.10 E-value=2.2e+02 Score=22.19 Aligned_cols=56 Identities=11% Similarity=0.126 Sum_probs=37.1
Q ss_pred CEEEEEeCCCeEE-EEEcCCCe-------eeeEecC--CCCCeeEEEEccCCcEEEEeeCCCcEEE
Q psy15417 33 RTFVSGACDASAK-LWDIRDGS-------CKQTFPG--HESDINAVTFFPNGWAFATGSDDATCRL 88 (176)
Q Consensus 33 ~~l~s~s~dg~v~-~wd~~~~~-------~~~~~~~--h~~~v~~v~~~~~~~~l~s~s~d~~i~i 88 (176)
..+..|+.+|.|+ +.-...+. .+..+.- ...+|..+.++++..+|+.++.++-+++
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 4688899999974 44332221 2223332 3578999999999999999988766554
No 367
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=26.19 E-value=2.4e+02 Score=22.70 Aligned_cols=56 Identities=5% Similarity=-0.055 Sum_probs=35.6
Q ss_pred cEEEEEcCCCeEEEEeCCC-c----e-eeeeec--CCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417 119 RLLLAGYDDFNCNVWDSMK-T----E-RAGILA--GHDNRVSCLGVTEDGMAVATGSWDSFLRI 174 (176)
Q Consensus 119 ~~l~~g~~d~~i~v~d~~~-~----~-~~~~~~--~~~~~i~~~~~~~~~~~l~tg~~d~~v~v 174 (176)
.+++.|+.+|+|+-.-... . . .+..+. .....|..+.++++...|..++.++-++|
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 5778899999875432222 2 1 111121 23456888999998888888888776665
No 368
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=25.87 E-value=2e+02 Score=21.07 Aligned_cols=47 Identities=6% Similarity=-0.091 Sum_probs=24.8
Q ss_pred CEEEEEeCCCeEEEEEcCC-CeeeeEe--cCCCCCeeEEEEcc--CCcEEEEe
Q psy15417 33 RTFVSGACDASAKLWDIRD-GSCKQTF--PGHESDINAVTFFP--NGWAFATG 80 (176)
Q Consensus 33 ~~l~s~s~dg~v~~wd~~~-~~~~~~~--~~h~~~v~~v~~~~--~~~~l~s~ 80 (176)
..|..|...| +.+++-.. ++.-..+ ......|.++++.| .+..++.+
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~ 74 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAA 74 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEE
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEe
Confidence 4677777776 55554332 2211111 11235699999998 45444444
No 369
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=24.31 E-value=2.8e+02 Score=22.33 Aligned_cols=56 Identities=4% Similarity=0.003 Sum_probs=37.6
Q ss_pred CEEEEEeCCCeEE-EEEcCCC----e-eeeEec--CCCCCeeEEEEccCCcEEEEeeCCCcEEE
Q psy15417 33 RTFVSGACDASAK-LWDIRDG----S-CKQTFP--GHESDINAVTFFPNGWAFATGSDDATCRL 88 (176)
Q Consensus 33 ~~l~s~s~dg~v~-~wd~~~~----~-~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~~i~i 88 (176)
..+..|+.+|.|+ +....++ . .+..+. ....+|..+.++++...|+.++..+-+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 4778899999975 4443322 1 122332 24578999999998888888877766665
No 370
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=23.66 E-value=3e+02 Score=22.45 Aligned_cols=67 Identities=4% Similarity=0.024 Sum_probs=42.7
Q ss_pred CeEEEEEc----CCC---CEEEEEeCCCeEE-EEEcCCCee-eeEec--CCCCCeeEEEEccCC--cEEEEeeCCCcEEE
Q psy15417 22 DVMSLSLA----PDM---RTFVSGACDASAK-LWDIRDGSC-KQTFP--GHESDINAVTFFPNG--WAFATGSDDATCRL 88 (176)
Q Consensus 22 ~V~~~~~~----~~~---~~l~s~s~dg~v~-~wd~~~~~~-~~~~~--~h~~~v~~v~~~~~~--~~l~s~s~d~~i~i 88 (176)
..+.++.. .++ ..++.|+.+|.|+ +........ +..+. ....+|..+.++++. ..|+.++..+-+++
T Consensus 398 ~~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 398 NYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred ceEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 34566553 343 3788999999974 445444322 22222 235789999999887 88888887765555
No 371
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=23.40 E-value=2.2e+02 Score=20.79 Aligned_cols=21 Identities=14% Similarity=0.222 Sum_probs=13.0
Q ss_pred cCeEEEEEcC--CCCEEEEEeCCC
Q psy15417 21 GDVMSLSLAP--DMRTFVSGACDA 42 (176)
Q Consensus 21 ~~V~~~~~~~--~~~~l~s~s~dg 42 (176)
..|.++.++| ++.+.+ +...|
T Consensus 55 ~~v~~i~~dp~~~~~l~~-g~~~g 77 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLM-AARTG 77 (394)
T ss_dssp SEEEEEEECSSSTTCEEE-EEEC-
T ss_pred CceEEEEECCCCCCeEEE-EecCC
Confidence 4689999998 444444 44444
No 372
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=22.12 E-value=3.2e+02 Score=22.15 Aligned_cols=142 Identities=15% Similarity=0.128 Sum_probs=77.3
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeE-ecCC----CCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417 21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT-FPGH----ESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~-~~~h----~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 95 (176)
..|.++...+++.+.+ |+.+ -+..+|..+++.... .... ...|.++...+++..|..+.. +-+..+|..+.+
T Consensus 146 ~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~ 222 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQ 222 (758)
T ss_dssp SCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTE
T ss_pred CeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCe
Confidence 4678888877777665 4444 477788877653321 1111 123778877776654444443 457778876543
Q ss_pred eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeee--c-----CCCccEEEEEEeCCCCEEEEccC
Q psy15417 96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL--A-----GHDNRVSCLGVTEDGMAVATGSW 168 (176)
Q Consensus 96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~--~-----~~~~~i~~~~~~~~~~~l~tg~~ 168 (176)
........ ...|.++...+++.+.+.. .+ -+.+++..+.+..... . -..+.|.++....+|. |..|+.
T Consensus 223 ~~~~~~l~--~~~i~~i~~d~~g~lWigT-~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWiGT~ 297 (758)
T 3ott_A 223 IKQTEAFH--NNSIKSLALDGNGDLLAGT-DN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHN-IWLGTD 297 (758)
T ss_dssp EEEEEEEE--EEEEEEEEECTTCCEEEEE-TT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCC-EEEEES
T ss_pred EEeccCCC--CCeEEEEEEcCCCCEEEEe-CC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC-EEEEeC
Confidence 22211111 1346777777777766554 44 4778886544322111 0 1124577777666554 344444
Q ss_pred CC
Q psy15417 169 DS 170 (176)
Q Consensus 169 d~ 170 (176)
.|
T Consensus 298 ~G 299 (758)
T 3ott_A 298 YG 299 (758)
T ss_dssp SS
T ss_pred Cc
Confidence 44
No 373
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=22.10 E-value=2.5e+02 Score=21.05 Aligned_cols=156 Identities=10% Similarity=0.123 Sum_probs=82.4
Q ss_pred cCeEEEEEcCCCCEEE--EEe-------------CCCeEEEEEcCCC--eeeeEecCC------CCCeeEEEEc---cC-
Q psy15417 21 GDVMSLSLAPDMRTFV--SGA-------------CDASAKLWDIRDG--SCKQTFPGH------ESDINAVTFF---PN- 73 (176)
Q Consensus 21 ~~V~~~~~~~~~~~l~--s~s-------------~dg~v~~wd~~~~--~~~~~~~~h------~~~v~~v~~~---~~- 73 (176)
-.|..+...+.+++=+ +|- .-.++.+||+++. +.++++.-. .+.++.+.+. |.
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG 166 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC
Confidence 4577777777665322 221 1235779999999 877766532 3457888887 22
Q ss_pred ----CcEEEEeeCCCcEEEeeCCCCCeeeEEe----ec--------ce----EeceEEEEECCC----CcEEEEEcCCC-
Q psy15417 74 ----GWAFATGSDDATCRLFDIRADQELAMYS----HD--------NI----ICGITSVAFSRS----GRLLLAGYDDF- 128 (176)
Q Consensus 74 ----~~~l~s~s~d~~i~iwd~~~~~~~~~~~----~~--------~~----~~~v~~~~~~~~----~~~l~~g~~d~- 128 (176)
+.-+++=+..+.|-++|+.+++..+... .+ .. ..++..++++|+ ++.|.-....+
T Consensus 167 ~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~ 246 (381)
T 3q6k_A 167 DCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI 246 (381)
T ss_dssp TSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS
T ss_pred CCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC
Confidence 2223444456789999998776544321 10 10 136778889887 55554433332
Q ss_pred eEEEEe---CCCce---eeeee--cCCCccEEEEEEe-CCCCEEEEccCCCcEEEeC
Q psy15417 129 NCNVWD---SMKTE---RAGIL--AGHDNRVSCLGVT-EDGMAVATGSWDSFLRIWN 176 (176)
Q Consensus 129 ~i~v~d---~~~~~---~~~~~--~~~~~~i~~~~~~-~~~~~l~tg~~d~~v~vwd 176 (176)
.+.--. +.... .+..+ .+....-..+++. .+|..+.+--....|..||
T Consensus 247 ~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~ 303 (381)
T 3q6k_A 247 KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWN 303 (381)
T ss_dssp EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEE
T ss_pred cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEe
Confidence 232221 11110 11111 1111222345564 4566666666666777774
No 374
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=20.70 E-value=3e+02 Score=22.56 Aligned_cols=56 Identities=13% Similarity=0.090 Sum_probs=35.6
Q ss_pred cEEEEEcCCCeEE-EEeCCCce-------eeeee--cCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417 119 RLLLAGYDDFNCN-VWDSMKTE-------RAGIL--AGHDNRVSCLGVTEDGMAVATGSWDSFLRI 174 (176)
Q Consensus 119 ~~l~~g~~d~~i~-v~d~~~~~-------~~~~~--~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v 174 (176)
.+++.|+.+|.|+ +....... .+..+ ......|..|.+++++..|..++.++-++|
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4678899999874 33211111 11111 134456888999999999999988876665
No 375
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=20.33 E-value=2.3e+02 Score=22.40 Aligned_cols=67 Identities=13% Similarity=0.036 Sum_probs=41.1
Q ss_pred CeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCC----eeeeEec--CCCCCee-EEEEccCCcEEEEeeCCCcEEE
Q psy15417 22 DVMSLSLAP--DMRTFVSGACDASAKLWDIRDG----SCKQTFP--GHESDIN-AVTFFPNGWAFATGSDDATCRL 88 (176)
Q Consensus 22 ~V~~~~~~~--~~~~l~s~s~dg~v~~wd~~~~----~~~~~~~--~h~~~v~-~v~~~~~~~~l~s~s~d~~i~i 88 (176)
..++++... +-..++.|+.+|.|+-..+... .....+. ....+|. .+.++++..+|+.++..+-+++
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 355555543 3357889999999854444321 1222332 2246785 8899998888888877655554
Done!