Your job contains 1 sequence.
>psy15417
MCDHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG
HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRL
LLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15417
(176 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
WB|WBGene00001679 - symbol:gpb-1 species:6239 "Caenorhabd... 801 9.7e-80 1
FB|FBgn0001105 - symbol:Gbeta13F "G protein beta-subunit ... 800 1.2e-79 1
UNIPROTKB|Q9HAV0 - symbol:GNB4 "Guanine nucleotide-bindin... 779 2.1e-77 1
UNIPROTKB|P11017 - symbol:GNB2 "Guanine nucleotide-bindin... 774 7.1e-77 1
UNIPROTKB|E2RD95 - symbol:GNB2 "Uncharacterized protein" ... 774 7.1e-77 1
UNIPROTKB|E7EP32 - symbol:GNB2 "Guanine nucleotide-bindin... 774 7.1e-77 1
UNIPROTKB|P62879 - symbol:GNB2 "Guanine nucleotide-bindin... 774 7.1e-77 1
MGI|MGI:95784 - symbol:Gnb2 "guanine nucleotide binding p... 774 7.1e-77 1
RGD|69319 - symbol:Gnb2 "guanine nucleotide binding prote... 774 7.1e-77 1
UNIPROTKB|B3KPU1 - symbol:GNB2 "Guanine nucleotide-bindin... 774 7.1e-77 1
ZFIN|ZDB-GENE-040426-2855 - symbol:gnb1b "guanine nucleot... 773 9.0e-77 1
ZFIN|ZDB-GENE-030131-823 - symbol:gnb1a "guanine nucleoti... 772 1.1e-76 1
UNIPROTKB|P62871 - symbol:GNB1 "Guanine nucleotide-bindin... 767 3.9e-76 1
UNIPROTKB|P62872 - symbol:GNB1 "Guanine nucleotide-bindin... 767 3.9e-76 1
UNIPROTKB|P62873 - symbol:GNB1 "Guanine nucleotide-bindin... 767 3.9e-76 1
MGI|MGI:95781 - symbol:Gnb1 "guanine nucleotide binding p... 767 3.9e-76 1
RGD|2718 - symbol:Gnb1 "guanine nucleotide binding protei... 767 3.9e-76 1
UNIPROTKB|B3KVK2 - symbol:GNB1 "cDNA FLJ16663 fis, clone ... 767 3.9e-76 1
RGD|1359321 - symbol:Gnb4 "guanine nucleotide binding pro... 758 3.5e-75 1
MGI|MGI:104581 - symbol:Gnb4 "guanine nucleotide binding ... 755 7.3e-75 1
UNIPROTKB|E1C9D6 - symbol:GNB3 "Uncharacterized protein" ... 734 1.2e-72 1
UNIPROTKB|E1BB14 - symbol:GNB3 "Uncharacterized protein" ... 724 1.4e-71 1
UNIPROTKB|P16520 - symbol:GNB3 "Guanine nucleotide-bindin... 719 4.8e-71 1
UNIPROTKB|F1SLU8 - symbol:GNB3 "Uncharacterized protein" ... 719 4.8e-71 1
RGD|708344 - symbol:Gnb3 "guanine nucleotide binding prot... 719 4.8e-71 1
UNIPROTKB|F1P8Q5 - symbol:GNB3 "Guanine nucleotide-bindin... 712 2.6e-70 1
UNIPROTKB|P79147 - symbol:GNB3 "Guanine nucleotide-bindin... 712 2.6e-70 1
MGI|MGI:95785 - symbol:Gnb3 "guanine nucleotide binding p... 712 2.6e-70 1
UNIPROTKB|F1NLV4 - symbol:GNB1 "Uncharacterized protein" ... 686 1.5e-67 1
DICTYBASE|DDB_G0277143 - symbol:gpbA "G protein b" specie... 636 3.0e-62 1
UNIPROTKB|A5PJS1 - symbol:GNB5 "GNB5 protein" species:991... 502 4.7e-48 1
UNIPROTKB|O14775 - symbol:GNB5 "Guanine nucleotide-bindin... 502 4.7e-48 1
UNIPROTKB|Q6PNB6 - symbol:GNB5 "Guanine nucleotide-bindin... 501 6.0e-48 1
MGI|MGI:101848 - symbol:Gnb5 "guanine nucleotide binding ... 501 6.0e-48 1
RGD|620759 - symbol:Gnb5 "guanine nucleotide binding prot... 501 6.0e-48 1
UNIPROTKB|F1RZC0 - symbol:GNB5 "Uncharacterized protein" ... 501 6.0e-48 1
UNIPROTKB|I3LLQ2 - symbol:GNB5 "Uncharacterized protein" ... 501 6.0e-48 1
UNIPROTKB|E1BVN4 - symbol:GNB5 "Uncharacterized protein" ... 500 7.7e-48 1
FB|FBgn0030011 - symbol:Gbeta5 "Gbeta5" species:7227 "Dro... 499 9.8e-48 1
ZFIN|ZDB-GENE-070112-342 - symbol:gnb5a "guanine nucleoti... 497 1.6e-47 1
WB|WBGene00001680 - symbol:gpb-2 species:6239 "Caenorhabd... 469 1.5e-44 1
UNIPROTKB|Q40687 - symbol:LOC_Os03g46650 "Guanine nucleot... 449 1.9e-42 1
UNIPROTKB|P93397 - symbol:P93397 "Guanine nucleotide-bind... 436 4.6e-41 1
TAIR|locus:2139489 - symbol:AGB1 "AT4G34460" species:3702... 433 9.6e-41 1
FB|FBgn0004623 - symbol:Gbeta76C "G protein beta-subunit ... 420 2.3e-39 1
POMBASE|SPBC32H8.07 - symbol:git5 "heterotrimeric G prote... 387 7.2e-36 1
CGD|CAL0002035 - symbol:STE4 species:5476 "Candida albica... 214 3.1e-33 2
UNIPROTKB|Q5AHJ7 - symbol:STE4 "Potential pheromone respo... 214 3.1e-33 2
UNIPROTKB|C9JXA5 - symbol:GNB2 "Guanine nucleotide-bindin... 326 2.1e-29 1
SGD|S000006382 - symbol:PRP4 "Splicing factor" species:49... 245 3.2e-20 1
UNIPROTKB|Q3MHE2 - symbol:PRPF4 "U4/U6 small nuclear ribo... 244 5.9e-20 1
UNIPROTKB|O43172 - symbol:PRPF4 "U4/U6 small nuclear ribo... 244 5.9e-20 1
UNIPROTKB|F1PZB0 - symbol:PRPF4 "Uncharacterized protein"... 244 6.3e-20 1
UNIPROTKB|I3LDL8 - symbol:PRPF4 "Uncharacterized protein"... 244 6.4e-20 1
ZFIN|ZDB-GENE-030131-5143 - symbol:prpf4 "PRP4 pre-mRNA p... 243 7.0e-20 1
RGD|1311303 - symbol:Prpf4 "PRP4 pre-mRNA processing fact... 243 7.5e-20 1
MGI|MGI:1917302 - symbol:Prpf4 "PRP4 pre-mRNA processing ... 242 9.6e-20 1
UNIPROTKB|C9JIS1 - symbol:GNB2 "Guanine nucleotide-bindin... 233 1.5e-19 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 247 1.5e-19 1
UNIPROTKB|F1NNQ9 - symbol:PRPF4 "Uncharacterized protein"... 240 1.6e-19 1
FB|FBgn0036733 - symbol:U4-U6-60K "U4-U6 small nuclear ri... 235 6.5e-19 1
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 179 2.0e-18 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 238 2.1e-18 1
SGD|S000000653 - symbol:PWP2 "Conserved 90S pre-ribosomal... 233 2.7e-18 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 223 3.0e-18 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 220 3.6e-18 1
TAIR|locus:2060560 - symbol:LIS "AT2G41500" species:3702 ... 228 3.7e-18 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 220 3.8e-18 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 220 3.8e-18 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 220 3.8e-18 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 220 3.8e-18 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 220 3.8e-18 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 225 4.1e-18 1
WB|WBGene00007972 - symbol:prp-4 species:6239 "Caenorhabd... 226 4.7e-18 1
UNIPROTKB|Q15269 - symbol:PWP2 "Periodic tryptophan prote... 225 2.0e-17 1
CGD|CAL0003392 - symbol:PWP2 species:5476 "Candida albica... 225 2.0e-17 1
UNIPROTKB|Q5A852 - symbol:PWP2 "Putative uncharacterized ... 225 2.0e-17 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 218 2.1e-17 1
UNIPROTKB|E1C4U3 - symbol:E1C4U3 "Uncharacterized protein... 211 2.4e-17 2
ASPGD|ASPL0000031743 - symbol:AN8505 species:162425 "Emer... 224 2.6e-17 1
FB|FBgn0010356 - symbol:Taf5 "TBP-associated factor 5" sp... 222 2.7e-17 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 213 2.7e-17 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 216 3.5e-17 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 211 4.5e-17 1
UNIPROTKB|E1BL00 - symbol:PWP2 "Uncharacterized protein" ... 221 5.2e-17 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 216 6.5e-17 1
TAIR|locus:2012971 - symbol:AT1G71840 "AT1G71840" species... 212 9.0e-17 1
ZFIN|ZDB-GENE-030131-263 - symbol:prp19 "PRP19/PSO4 homol... 201 9.5e-17 2
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 213 1.0e-16 2
ASPGD|ASPL0000002074 - symbol:rcoA species:162425 "Emeric... 215 1.0e-16 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 207 1.2e-16 1
CGD|CAL0005939 - symbol:TUP1 species:5476 "Candida albica... 213 1.3e-16 1
UNIPROTKB|P0CY34 - symbol:TUP1 "Transcriptional repressor... 213 1.3e-16 1
UNIPROTKB|G4N183 - symbol:MGG_07465 "Periodic tryptophan ... 217 1.4e-16 1
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 216 1.4e-16 1
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 213 1.5e-16 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 210 1.6e-16 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 205 1.6e-16 1
UNIPROTKB|G4MUR7 - symbol:MGG_08829 "Transcriptional repr... 213 1.9e-16 1
ASPGD|ASPL0000055088 - symbol:AN10058 species:162425 "Eme... 211 2.2e-16 1
WARNING: Descriptions of 1107 database sequences were not reported due to the
limiting value of parameter V = 100.
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
Identities = 146/162 (90%), Positives = 154/162 (95%)
Query: 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
A +GHTGDVMSLSL+PD RTF+SGACDASAKLWDIRDG CKQTFPGHESDINAV FFP+G
Sbjct: 179 AFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSG 238
Query: 75 WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS+SGRLL AGYDDFNCNVWD
Sbjct: 239 NAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLFAGYDDFNCNVWD 298
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
SM+ ERAG+LAGHDNRVSCLGVTEDGMAV TGSWDSFL+IWN
Sbjct: 299 SMRQERAGVLAGHDNRVSCLGVTEDGMAVCTGSWDSFLKIWN 340
Score = 171 (65.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 49/166 (29%), Positives = 81/166 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG +S D V+ + D + LWDI G F GH D+ +++ P+ F
Sbjct: 141 GHTG-YLSCCRFLDDNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTF 199
Query: 78 ATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ DA+ +L+DIR + H++ I +VAF SG G DD C ++D +
Sbjct: 200 ISGACDASAKLWDIRDGMCKQTFPGHES---DINAVAFFPSGNAFATGSDDATCRLFD-I 255
Query: 137 KTERAGILAGHDNRVSCLGVT-----EDGMAVATGSWDSF-LRIWN 176
+ ++ + HDN + C G+T + G + G +D F +W+
Sbjct: 256 RADQELAMYSHDN-IIC-GITSVAFSKSGRLLFAG-YDDFNCNVWD 298
Score = 124 (48.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/160 (20%), Positives = 61/160 (38%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ A D R VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C ++ ++ + S + G S ++ D C +WD
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ GH V L ++ D +G+ D+ ++W+
Sbjct: 173 TGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWD 212
>FB|FBgn0001105 [details] [associations]
symbol:Gbeta13F "G protein beta-subunit 13F" species:7227
"Drosophila melanogaster" [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS;NAS] [GO:0003924 "GTPase activity"
evidence=ISS;NAS] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISS;NAS] [GO:0055059 "asymmetric neuroblast
division" evidence=IMP] [GO:0007015 "actin filament organization"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=TAS] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005886 GO:GO:0005875 GO:GO:0007015
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 ChiTaRS:Gbeta13F EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0045176
PRINTS:PR00319 GO:GO:0055059 GeneTree:ENSGT00550000074331 KO:K04536
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:M22567
EMBL:AY058566 PIR:A40489 RefSeq:NP_525090.1 RefSeq:NP_727907.1
RefSeq:NP_996459.1 RefSeq:NP_996460.1 RefSeq:NP_996461.1
RefSeq:NP_996462.1 UniGene:Dm.7041 ProteinModelPortal:P26308
SMR:P26308 DIP:DIP-18432N MINT:MINT-1016369 STRING:P26308
PaxDb:P26308 PRIDE:P26308 EnsemblMetazoa:FBtr0074106
EnsemblMetazoa:FBtr0074107 EnsemblMetazoa:FBtr0074108
EnsemblMetazoa:FBtr0074110 EnsemblMetazoa:FBtr0074111
EnsemblMetazoa:FBtr0331597 GeneID:32544 KEGG:dme:Dmel_CG10545
CTD:32544 FlyBase:FBgn0001105 InParanoid:P26308 OrthoDB:EOG4NS1T0
PhylomeDB:P26308 GenomeRNAi:32544 NextBio:779043 Bgee:P26308
GermOnline:CG10545 Uniprot:P26308
Length = 340
Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
Identities = 146/159 (91%), Positives = 154/159 (96%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTGDVM+LSLAP +TFVSGACDASAKLWDIR+G CKQTFPGHESDINAVTFFPNG AF
Sbjct: 182 GHTGDVMALSLAPQCKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAF 241
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS+SGRLLLAGYDDFNCNVWD+MK
Sbjct: 242 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMK 301
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
ER+GILAGHDNRVSCLGVTE+GMAVATGSWDSFLR+WN
Sbjct: 302 AERSGILAGHDNRVSCLGVTENGMAVATGSWDSFLRVWN 340
Score = 162 (62.1 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 48/166 (28%), Positives = 80/166 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH G +S D V+ + D S LWDI G +F GH D+ A++ P F
Sbjct: 141 GH-GGYLSCCRFLDDNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQCKTF 199
Query: 78 ATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ DA+ +L+DIR + H++ I +V F +G+ G DD C ++D +
Sbjct: 200 VSGACDASAKLWDIREGVCKQTFPGHES---DINAVTFFPNGQAFATGSDDATCRLFD-I 255
Query: 137 KTERAGILAGHDNRVSCLGVT-----EDGMAVATGSWDSF-LRIWN 176
+ ++ + HDN + C G+T + G + G +D F +W+
Sbjct: 256 RADQELAMYSHDN-IIC-GITSVAFSKSGRLLLAG-YDDFNCNVWD 298
Score = 113 (44.8 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 31/161 (19%), Positives = 63/161 (39%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ D R VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICG--ITSVAFSRSGRLLLAGYDDFNCNVWDS 135
A G D C +++++ + S + G ++ F +++ + D +C +WD
Sbjct: 113 ACGGLDNMCSIYNLKTREGNVRVSRELPGHGGYLSCCRFLDDNQIVTSS-GDMSCGLWDI 171
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ GH V L + +G+ D+ ++W+
Sbjct: 172 ETGLQVTSFLGHTGDVMALSLAPQCKTFVSGACDASAKLWD 212
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 139/160 (86%), Positives = 155/160 (96%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH+GDVMSLSL+PDMRTFVSGACDAS+KLWDIRDG C+Q+F GH SDINAV+FFPNG+A
Sbjct: 181 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA 240
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
FATGSDDATCRLFD+RADQEL +YSHDNIICGITSVAFS+SGRLLLAGYDDFNCNVWD++
Sbjct: 241 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL 300
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFLRIWN
Sbjct: 301 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 179 (68.1 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 47/165 (28%), Positives = 81/165 (49%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG + D + V+ + D + LWDI TF GH D+ +++ P+ F
Sbjct: 141 GHTGYLSCCRFLDDSQ-IVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSLSPDMRTF 199
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+G+ DA+ +L+DIR + S + I +V+F +G G DD C ++D ++
Sbjct: 200 VSGACDASSKLWDIR--DGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFD-LR 256
Query: 138 TERAGILAGHDNRVSCLGVT-----EDGMAVATGSWDSF-LRIWN 176
++ +L HDN + C G+T + G + G +D F +W+
Sbjct: 257 ADQELLLYSHDN-IIC-GITSVAFSKSGRLLLAG-YDDFNCNVWD 298
Score = 119 (46.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 32/160 (20%), Positives = 61/160 (38%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ D R VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C +++++ + S + G S ++ D C +WD
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ GH V L ++ D +G+ D+ ++W+
Sbjct: 173 TAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWD 212
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 139/160 (86%), Positives = 151/160 (94%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH+GDVMSLSLAPD RTFVSGACDAS KLWD+RD C+QTF GHESDINAV FFPNG+A
Sbjct: 181 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA 240
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
F TGSDDATCRLFD+RADQEL MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN+WD+M
Sbjct: 241 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM 300
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 301 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 181 (68.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 48/166 (28%), Positives = 79/166 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG + D + S D + LWDI G F GH D+ +++ P+G F
Sbjct: 141 GHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTF 199
Query: 78 ATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ DA+ +L+D+R H++ I +VAF +G G DD C ++D +
Sbjct: 200 VSGACDASIKLWDVRDSMCRQTFIGHES---DINAVAFFPNGYAFTTGSDDATCRLFD-L 255
Query: 137 KTERAGILAGHDNRVSCLGVTE-----DGMAVATGSWDSF-LRIWN 176
+ ++ ++ HDN + C G+T G + G +D F IW+
Sbjct: 256 RADQELLMYSHDN-IIC-GITSVAFSRSGRLLLAG-YDDFNCNIWD 298
Score = 131 (51.2 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 34/160 (21%), Positives = 62/160 (38%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ D R VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C ++ ++ + S + G S ++ D C +WD
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ AGH V L + DG +G+ D+ +++W+
Sbjct: 173 TGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 212
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 139/160 (86%), Positives = 151/160 (94%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH+GDVMSLSLAPD RTFVSGACDAS KLWD+RD C+QTF GHESDINAV FFPNG+A
Sbjct: 181 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA 240
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
F TGSDDATCRLFD+RADQEL MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN+WD+M
Sbjct: 241 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM 300
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 301 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 181 (68.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 48/166 (28%), Positives = 79/166 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG + D + S D + LWDI G F GH D+ +++ P+G F
Sbjct: 141 GHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTF 199
Query: 78 ATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ DA+ +L+D+R H++ I +VAF +G G DD C ++D +
Sbjct: 200 VSGACDASIKLWDVRDSMCRQTFIGHES---DINAVAFFPNGYAFTTGSDDATCRLFD-L 255
Query: 137 KTERAGILAGHDNRVSCLGVTE-----DGMAVATGSWDSF-LRIWN 176
+ ++ ++ HDN + C G+T G + G +D F IW+
Sbjct: 256 RADQELLMYSHDN-IIC-GITSVAFSRSGRLLLAG-YDDFNCNIWD 298
Score = 131 (51.2 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 34/160 (21%), Positives = 62/160 (38%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ D R VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C ++ ++ + S + G S ++ D C +WD
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ AGH V L + DG +G+ D+ +++W+
Sbjct: 173 TGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 212
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 139/160 (86%), Positives = 151/160 (94%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH+GDVMSLSLAPD RTFVSGACDAS KLWD+RD C+QTF GHESDINAV FFPNG+A
Sbjct: 137 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA 196
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
F TGSDDATCRLFD+RADQEL MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN+WD+M
Sbjct: 197 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM 256
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 257 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 296
Score = 181 (68.8 bits), Expect = 7.3e-14, P = 7.3e-14
Identities = 48/166 (28%), Positives = 79/166 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG + D + S D + LWDI G F GH D+ +++ P+G F
Sbjct: 97 GHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTF 155
Query: 78 ATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ DA+ +L+D+R H++ I +VAF +G G DD C ++D +
Sbjct: 156 VSGACDASIKLWDVRDSMCRQTFIGHES---DINAVAFFPNGYAFTTGSDDATCRLFD-L 211
Query: 137 KTERAGILAGHDNRVSCLGVTE-----DGMAVATGSWDSF-LRIWN 176
+ ++ ++ HDN + C G+T G + G +D F IW+
Sbjct: 212 RADQELLMYSHDN-IIC-GITSVAFSRSGRLLLAG-YDDFNCNIWD 254
Score = 131 (51.2 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 34/160 (21%), Positives = 62/160 (38%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ D R VS + D +WD + P S + + P+G
Sbjct: 9 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 68
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C ++ ++ + S + G S ++ D C +WD
Sbjct: 69 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIE 128
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ AGH V L + DG +G+ D+ +++W+
Sbjct: 129 TGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 168
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 139/160 (86%), Positives = 151/160 (94%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH+GDVMSLSLAPD RTFVSGACDAS KLWD+RD C+QTF GHESDINAV FFPNG+A
Sbjct: 181 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA 240
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
F TGSDDATCRLFD+RADQEL MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN+WD+M
Sbjct: 241 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM 300
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 301 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 181 (68.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 48/166 (28%), Positives = 79/166 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG + D + S D + LWDI G F GH D+ +++ P+G F
Sbjct: 141 GHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTF 199
Query: 78 ATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ DA+ +L+D+R H++ I +VAF +G G DD C ++D +
Sbjct: 200 VSGACDASIKLWDVRDSMCRQTFIGHES---DINAVAFFPNGYAFTTGSDDATCRLFD-L 255
Query: 137 KTERAGILAGHDNRVSCLGVTE-----DGMAVATGSWDSF-LRIWN 176
+ ++ ++ HDN + C G+T G + G +D F IW+
Sbjct: 256 RADQELLMYSHDN-IIC-GITSVAFSRSGRLLLAG-YDDFNCNIWD 298
Score = 131 (51.2 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 34/160 (21%), Positives = 62/160 (38%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ D R VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C ++ ++ + S + G S ++ D C +WD
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ AGH V L + DG +G+ D+ +++W+
Sbjct: 173 TGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 212
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 139/160 (86%), Positives = 151/160 (94%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH+GDVMSLSLAPD RTFVSGACDAS KLWD+RD C+QTF GHESDINAV FFPNG+A
Sbjct: 181 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA 240
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
F TGSDDATCRLFD+RADQEL MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN+WD+M
Sbjct: 241 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM 300
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 301 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 181 (68.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 48/166 (28%), Positives = 79/166 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG + D + S D + LWDI G F GH D+ +++ P+G F
Sbjct: 141 GHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTF 199
Query: 78 ATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ DA+ +L+D+R H++ I +VAF +G G DD C ++D +
Sbjct: 200 VSGACDASIKLWDVRDSMCRQTFIGHES---DINAVAFFPNGYAFTTGSDDATCRLFD-L 255
Query: 137 KTERAGILAGHDNRVSCLGVTE-----DGMAVATGSWDSF-LRIWN 176
+ ++ ++ HDN + C G+T G + G +D F IW+
Sbjct: 256 RADQELLMYSHDN-IIC-GITSVAFSRSGRLLLAG-YDDFNCNIWD 298
Score = 131 (51.2 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 34/160 (21%), Positives = 62/160 (38%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ D R VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C ++ ++ + S + G S ++ D C +WD
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ AGH V L + DG +G+ D+ +++W+
Sbjct: 173 TGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 212
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 139/160 (86%), Positives = 151/160 (94%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH+GDVMSLSLAPD RTFVSGACDAS KLWD+RD C+QTF GHESDINAV FFPNG+A
Sbjct: 181 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA 240
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
F TGSDDATCRLFD+RADQEL MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN+WD+M
Sbjct: 241 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM 300
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 301 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 181 (68.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 48/166 (28%), Positives = 79/166 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG + D + S D + LWDI G F GH D+ +++ P+G F
Sbjct: 141 GHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTF 199
Query: 78 ATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ DA+ +L+D+R H++ I +VAF +G G DD C ++D +
Sbjct: 200 VSGACDASIKLWDVRDSMCRQTFIGHES---DINAVAFFPNGYAFTTGSDDATCRLFD-L 255
Query: 137 KTERAGILAGHDNRVSCLGVTE-----DGMAVATGSWDSF-LRIWN 176
+ ++ ++ HDN + C G+T G + G +D F IW+
Sbjct: 256 RADQELLMYSHDN-IIC-GITSVAFSRSGRLLLAG-YDDFNCNIWD 298
Score = 131 (51.2 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 34/160 (21%), Positives = 62/160 (38%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ D R VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C ++ ++ + S + G S ++ D C +WD
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ AGH V L + DG +G+ D+ +++W+
Sbjct: 173 TGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 212
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 139/160 (86%), Positives = 151/160 (94%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH+GDVMSLSLAPD RTFVSGACDAS KLWD+RD C+QTF GHESDINAV FFPNG+A
Sbjct: 81 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA 140
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
F TGSDDATCRLFD+RADQEL MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN+WD+M
Sbjct: 141 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM 200
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 201 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 48/166 (28%), Positives = 79/166 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG + D + S D + LWDI G F GH D+ +++ P+G F
Sbjct: 41 GHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTF 99
Query: 78 ATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ DA+ +L+D+R H++ I +VAF +G G DD C ++D +
Sbjct: 100 VSGACDASIKLWDVRDSMCRQTFIGHES---DINAVAFFPNGYAFTTGSDDATCRLFD-L 155
Query: 137 KTERAGILAGHDNRVSCLGVTE-----DGMAVATGSWDSF-LRIWN 176
+ ++ ++ HDN + C G+T G + G +D F IW+
Sbjct: 156 RADQELLMYSHDN-IIC-GITSVAFSRSGRLLLAG-YDDFNCNIWD 198
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 139/160 (86%), Positives = 152/160 (95%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHTGDVMSLSLAPD R FVSGACDASAKLWDIR+G C+QTF GHESDINA+ FFPNG A
Sbjct: 181 AGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNA 240
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
FATGSDDATCRLFD+RADQEL +YSHDNIICGITSVAFS+SGRLLLAGYDDFNCNVWD++
Sbjct: 241 FATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL 300
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 301 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 177 (67.4 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 47/167 (28%), Positives = 84/167 (50%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHTG +S D V+ + D + LWDI G TF GH D+ +++ P+
Sbjct: 140 AGHTG-YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRL 198
Query: 77 FATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G+ DA+ +L+DIR ++ H++ I ++ F +G G DD C ++D
Sbjct: 199 FVSGACDASAKLWDIREGMCRQTFTGHES---DINAICFFPNGNAFATGSDDATCRLFD- 254
Query: 136 MKTERAGILAGHDNRVSCLGVT-----EDGMAVATGSWDSF-LRIWN 176
++ ++ ++ HDN + C G+T + G + G +D F +W+
Sbjct: 255 LRADQELMVYSHDN-IIC-GITSVAFSKSGRLLLAG-YDDFNCNVWD 298
Score = 123 (48.4 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 33/160 (20%), Positives = 60/160 (37%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ D R VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C ++ ++ + S + G S ++ D C +WD
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ AGH V L + D +G+ D+ ++W+
Sbjct: 173 TGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWD 212
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 138/160 (86%), Positives = 152/160 (95%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHTGDVMSLSLAPD R FVSGACDASAKLWD+R+G C+QTF GHESDINA+ FFPNG A
Sbjct: 181 AGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA 240
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
FATGSDDATCRLFD+RADQEL +YSHDNIICGITSVAFS+SGRLLLAGYDDFNCNVWD++
Sbjct: 241 FATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDAL 300
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 301 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 176 (67.0 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 46/167 (27%), Positives = 84/167 (50%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHTG +S D V+ + D + LWDI G TF GH D+ +++ P+
Sbjct: 140 AGHTG-YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRL 198
Query: 77 FATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G+ DA+ +L+D+R ++ H++ I ++ F +G G DD C ++D
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHES---DINAICFFPNGNAFATGSDDATCRLFD- 254
Query: 136 MKTERAGILAGHDNRVSCLGVT-----EDGMAVATGSWDSF-LRIWN 176
++ ++ ++ HDN + C G+T + G + G +D F +W+
Sbjct: 255 LRADQELMVYSHDN-IIC-GITSVAFSKSGRLLLAG-YDDFNCNVWD 298
Score = 124 (48.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/160 (20%), Positives = 61/160 (38%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ D R VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C +++++ + S + G S ++ D C +WD
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ AGH V L + D +G+ D+ ++W+
Sbjct: 173 TGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWD 212
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 137/160 (85%), Positives = 151/160 (94%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHTGDVMSLSLAPD R FVSGACDASAKLWD+R+G C+QTF GHESDINA+ FFPNG A
Sbjct: 181 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA 240
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
FATGSDDATCRLFD+RADQEL YSHDNIICGITSV+FS+SGRLLLAGYDDFNCNVWD++
Sbjct: 241 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 301 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 174 (66.3 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 46/167 (27%), Positives = 83/167 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHTG +S D V+ + D + LWDI G TF GH D+ +++ P+
Sbjct: 140 AGHTG-YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL 198
Query: 77 FATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G+ DA+ +L+D+R ++ H++ I ++ F +G G DD C ++D
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHES---DINAICFFPNGNAFATGSDDATCRLFD- 254
Query: 136 MKTERAGILAGHDNRVSCLGVT-----EDGMAVATGSWDSF-LRIWN 176
++ ++ + HDN + C G+T + G + G +D F +W+
Sbjct: 255 LRADQELMTYSHDN-IIC-GITSVSFSKSGRLLLAG-YDDFNCNVWD 298
Score = 120 (47.3 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 32/160 (20%), Positives = 60/160 (37%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ D R VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C +++++ + S + G S ++ D C +WD
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ GH V L + D +G+ D+ ++W+
Sbjct: 173 TGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWD 212
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 137/160 (85%), Positives = 151/160 (94%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHTGDVMSLSLAPD R FVSGACDASAKLWD+R+G C+QTF GHESDINA+ FFPNG A
Sbjct: 181 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA 240
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
FATGSDDATCRLFD+RADQEL YSHDNIICGITSV+FS+SGRLLLAGYDDFNCNVWD++
Sbjct: 241 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 301 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 174 (66.3 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 46/167 (27%), Positives = 83/167 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHTG +S D V+ + D + LWDI G TF GH D+ +++ P+
Sbjct: 140 AGHTG-YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL 198
Query: 77 FATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G+ DA+ +L+D+R ++ H++ I ++ F +G G DD C ++D
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHES---DINAICFFPNGNAFATGSDDATCRLFD- 254
Query: 136 MKTERAGILAGHDNRVSCLGVT-----EDGMAVATGSWDSF-LRIWN 176
++ ++ + HDN + C G+T + G + G +D F +W+
Sbjct: 255 LRADQELMTYSHDN-IIC-GITSVSFSKSGRLLLAG-YDDFNCNVWD 298
Score = 120 (47.3 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 32/160 (20%), Positives = 60/160 (37%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ D R VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C +++++ + S + G S ++ D C +WD
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ GH V L + D +G+ D+ ++W+
Sbjct: 173 TGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWD 212
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 137/160 (85%), Positives = 151/160 (94%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHTGDVMSLSLAPD R FVSGACDASAKLWD+R+G C+QTF GHESDINA+ FFPNG A
Sbjct: 181 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA 240
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
FATGSDDATCRLFD+RADQEL YSHDNIICGITSV+FS+SGRLLLAGYDDFNCNVWD++
Sbjct: 241 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 301 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 174 (66.3 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 46/167 (27%), Positives = 83/167 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHTG +S D V+ + D + LWDI G TF GH D+ +++ P+
Sbjct: 140 AGHTG-YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL 198
Query: 77 FATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G+ DA+ +L+D+R ++ H++ I ++ F +G G DD C ++D
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHES---DINAICFFPNGNAFATGSDDATCRLFD- 254
Query: 136 MKTERAGILAGHDNRVSCLGVT-----EDGMAVATGSWDSF-LRIWN 176
++ ++ + HDN + C G+T + G + G +D F +W+
Sbjct: 255 LRADQELMTYSHDN-IIC-GITSVSFSKSGRLLLAG-YDDFNCNVWD 298
Score = 120 (47.3 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 32/160 (20%), Positives = 60/160 (37%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ D R VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C +++++ + S + G S ++ D C +WD
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ GH V L + D +G+ D+ ++W+
Sbjct: 173 TGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWD 212
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 137/160 (85%), Positives = 151/160 (94%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHTGDVMSLSLAPD R FVSGACDASAKLWD+R+G C+QTF GHESDINA+ FFPNG A
Sbjct: 181 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA 240
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
FATGSDDATCRLFD+RADQEL YSHDNIICGITSV+FS+SGRLLLAGYDDFNCNVWD++
Sbjct: 241 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 301 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 174 (66.3 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 46/167 (27%), Positives = 83/167 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHTG +S D V+ + D + LWDI G TF GH D+ +++ P+
Sbjct: 140 AGHTG-YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL 198
Query: 77 FATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G+ DA+ +L+D+R ++ H++ I ++ F +G G DD C ++D
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHES---DINAICFFPNGNAFATGSDDATCRLFD- 254
Query: 136 MKTERAGILAGHDNRVSCLGVT-----EDGMAVATGSWDSF-LRIWN 176
++ ++ + HDN + C G+T + G + G +D F +W+
Sbjct: 255 LRADQELMTYSHDN-IIC-GITSVSFSKSGRLLLAG-YDDFNCNVWD 298
Score = 120 (47.3 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 32/160 (20%), Positives = 60/160 (37%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ D R VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C +++++ + S + G S ++ D C +WD
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ GH V L + D +G+ D+ ++W+
Sbjct: 173 TGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWD 212
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 137/160 (85%), Positives = 151/160 (94%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHTGDVMSLSLAPD R FVSGACDASAKLWD+R+G C+QTF GHESDINA+ FFPNG A
Sbjct: 181 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA 240
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
FATGSDDATCRLFD+RADQEL YSHDNIICGITSV+FS+SGRLLLAGYDDFNCNVWD++
Sbjct: 241 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 301 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 174 (66.3 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 46/167 (27%), Positives = 83/167 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHTG +S D V+ + D + LWDI G TF GH D+ +++ P+
Sbjct: 140 AGHTG-YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL 198
Query: 77 FATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G+ DA+ +L+D+R ++ H++ I ++ F +G G DD C ++D
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHES---DINAICFFPNGNAFATGSDDATCRLFD- 254
Query: 136 MKTERAGILAGHDNRVSCLGVT-----EDGMAVATGSWDSF-LRIWN 176
++ ++ + HDN + C G+T + G + G +D F +W+
Sbjct: 255 LRADQELMTYSHDN-IIC-GITSVSFSKSGRLLLAG-YDDFNCNVWD 298
Score = 120 (47.3 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 32/160 (20%), Positives = 60/160 (37%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ D R VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C +++++ + S + G S ++ D C +WD
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ GH V L + D +G+ D+ ++W+
Sbjct: 173 TGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWD 212
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 137/160 (85%), Positives = 151/160 (94%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHTGDVMSLSLAPD R FVSGACDASAKLWD+R+G C+QTF GHESDINA+ FFPNG A
Sbjct: 81 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA 140
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
FATGSDDATCRLFD+RADQEL YSHDNIICGITSV+FS+SGRLLLAGYDDFNCNVWD++
Sbjct: 141 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 200
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 201 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 46/167 (27%), Positives = 83/167 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHTG +S D V+ + D + LWDI G TF GH D+ +++ P+
Sbjct: 40 AGHTG-YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL 98
Query: 77 FATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G+ DA+ +L+D+R ++ H++ I ++ F +G G DD C ++D
Sbjct: 99 FVSGACDASAKLWDVREGMCRQTFTGHES---DINAICFFPNGNAFATGSDDATCRLFD- 154
Query: 136 MKTERAGILAGHDNRVSCLGVT-----EDGMAVATGSWDSF-LRIWN 176
++ ++ + HDN + C G+T + G + G +D F +W+
Sbjct: 155 LRADQELMTYSHDN-IIC-GITSVSFSKSGRLLLAG-YDDFNCNVWD 198
>RGD|1359321 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta polypeptide 4" species:10116 "Rattus norvegicus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0044297 "cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 RGD:1359321 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
GO:GO:0044297 PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 EMBL:AY552804 EMBL:BC097370 EMBL:AF022085 IPI:IPI00422067
RefSeq:NP_001013932.1 UniGene:Rn.10844 ProteinModelPortal:O35353
SMR:O35353 IntAct:O35353 STRING:O35353 PhosphoSite:O35353
PRIDE:O35353 GeneID:294962 KEGG:rno:294962 UCSC:RGD:1359321
InParanoid:O35353 NextBio:638784 ArrayExpress:O35353
Genevestigator:O35353 Uniprot:O35353
Length = 340
Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
Identities = 135/160 (84%), Positives = 154/160 (96%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH+GDVMSLSL+PD++TFVSGACDAS+KLWDIRDG C+Q+F GH SDINAV+FFP+G+A
Sbjct: 181 TGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYA 240
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
FATGSDDATCRLFD+RADQEL +YSHDNIICGITSVAFS+SGRLLLAGYDDFNC+VWD++
Sbjct: 241 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDAL 300
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFLRIWN
Sbjct: 301 KGGRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 185 (70.2 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 50/165 (30%), Positives = 80/165 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG + D + S D + LWDI G TF GH D+ +++ P+ F
Sbjct: 141 GHTGYLSCCRFLDDGQIITSSG-DTTCALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTF 199
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+G+ DA+ +L+DIR + S I I +V+F SG G DD C ++D ++
Sbjct: 200 VSGACDASSKLWDIR--DGMCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFD-LR 256
Query: 138 TERAGILAGHDNRVSCLGVT-----EDGMAVATGSWDSF-LRIWN 176
++ +L HDN + C G+T + G + G +D F +W+
Sbjct: 257 ADQELLLYSHDN-IIC-GITSVAFSKSGRLLLAG-YDDFNCSVWD 298
Score = 121 (47.7 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 34/161 (21%), Positives = 65/161 (40%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ D R VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNI-ICGITSVA-FSRSGRLLLAGYDDFNCNVWDS 135
A G D C +++++ + S + G S F G+++ + D C +WD
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSS-GDTTCALWDI 171
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ GH V L ++ D +G+ D+ ++W+
Sbjct: 172 ETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWD 212
>MGI|MGI:104581 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta 4" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISA] [GO:0006184 "GTP catabolic process" evidence=ISA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0044297 "cell body" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 MGI:MGI:104581
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 OMA:GACDATS EMBL:S86124 EMBL:M87286 EMBL:M63658
EMBL:AF277893 EMBL:AF501886 EMBL:AK036816 EMBL:AK152227
EMBL:AK167416 EMBL:BC028753 IPI:IPI00310220 PIR:JS0669
RefSeq:NP_038559.2 UniGene:Mm.139192 ProteinModelPortal:P29387
SMR:P29387 DIP:DIP-604N IntAct:P29387 STRING:P29387
PhosphoSite:P29387 REPRODUCTION-2DPAGE:P29387 PaxDb:P29387
PRIDE:P29387 Ensembl:ENSMUST00000108234 Ensembl:ENSMUST00000155737
GeneID:14696 KEGG:mmu:14696 InParanoid:P29387 NextBio:286647
Bgee:P29387 Genevestigator:P29387 GermOnline:ENSMUSG00000027669
Uniprot:P29387
Length = 340
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 134/160 (83%), Positives = 154/160 (96%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH+GDVMSLSL+PD++TFVSGACDAS+KLWDIRDG C+Q+F GH SDINAV+FFP+G+A
Sbjct: 181 TGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYA 240
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
FATGSDDATCRLFD+RADQEL +YSHDNIICGITSVAFS+SGRLLLAGYDDFNC+VWD++
Sbjct: 241 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDAL 300
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K R+G+LAGHDNRVSCLGVT+DGMAVATGSWDSFLRIWN
Sbjct: 301 KGGRSGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 185 (70.2 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 50/165 (30%), Positives = 80/165 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG + D + S D + LWDI G TF GH D+ +++ P+ F
Sbjct: 141 GHTGYLSCCRFLDDGQIITSSG-DTTCALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTF 199
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+G+ DA+ +L+DIR + S I I +V+F SG G DD C ++D ++
Sbjct: 200 VSGACDASSKLWDIR--DGMCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFD-LR 256
Query: 138 TERAGILAGHDNRVSCLGVT-----EDGMAVATGSWDSF-LRIWN 176
++ +L HDN + C G+T + G + G +D F +W+
Sbjct: 257 ADQELLLYSHDN-IIC-GITSVAFSKSGRLLLAG-YDDFNCSVWD 298
Score = 121 (47.7 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 34/161 (21%), Positives = 65/161 (40%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ D R VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNI-ICGITSVA-FSRSGRLLLAGYDDFNCNVWDS 135
A G D C +++++ + S + G S F G+++ + D C +WD
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSS-GDTTCALWDI 171
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ GH V L ++ D +G+ D+ ++W+
Sbjct: 172 ETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWD 212
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 128/159 (80%), Positives = 147/159 (92%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTGD MSL+++PD + F+SGACDA+AKLWD+R+G+C+QTF GHESDINA+ FFPNG A
Sbjct: 182 GHTGDCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTFSGHESDINAICFFPNGEAI 241
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
TGSDDATCRLFD+RADQEL +YSH++IICGITSVAFSRSGRLLLAGYDDFNCN+WDS+K
Sbjct: 242 CTGSDDATCRLFDLRADQELIVYSHESIICGITSVAFSRSGRLLLAGYDDFNCNIWDSLK 301
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
ER GIL+GHDNRVSCLGVT DGMAVATGSWDSFL+IWN
Sbjct: 302 AERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 168 (64.2 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 48/167 (28%), Positives = 82/167 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
S HTG +S D + V+ + D + LWDI G K F GH D ++ P+
Sbjct: 140 SAHTG-YLSCCRFLDDNSIVTSSGDTTCALWDIETGQQKTVFLGHTGDCMSLAVSPDFKL 198
Query: 77 FATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G+ DAT +L+D+R +S H++ I ++ F +G + G DD C ++D
Sbjct: 199 FISGACDATAKLWDVREGTCRQTFSGHES---DINAICFFPNGEAICTGSDDATCRLFD- 254
Query: 136 MKTERAGILAGHDNRVSCLGVTE-----DGMAVATGSWDSF-LRIWN 176
++ ++ I+ H++ + C G+T G + G +D F IW+
Sbjct: 255 LRADQELIVYSHES-IIC-GITSVAFSRSGRLLLAG-YDDFNCNIWD 298
Score = 121 (47.7 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 31/160 (19%), Positives = 63/160 (39%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ + D + VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWSTDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C +++++ + S + + G S ++ D C +WD
Sbjct: 113 ACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFLDDNSIVTSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ + GH L V+ D +G+ D+ ++W+
Sbjct: 173 TGQQKTVFLGHTGDCMSLAVSPDFKLFISGACDATAKLWD 212
>UNIPROTKB|E1BB14 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:DAAA02014455 IPI:IPI00703992 RefSeq:NP_001179276.1
UniGene:Bt.16171 ProteinModelPortal:E1BB14
Ensembl:ENSBTAT00000021348 GeneID:513340 KEGG:bta:513340
NextBio:20870819 Uniprot:E1BB14
Length = 340
Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
Identities = 128/159 (80%), Positives = 144/159 (90%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTGD MSL+++PD R F+SGACDASAKLWD+R+G+C+QTF GHESDINA+ FFPNG A
Sbjct: 182 GHTGDCMSLAVSPDFRLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAI 241
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
TGSDDA+CRLFD+RADQEL Y+H++IICGITSVAFS SGRLL AGYDDFNCNVWDSMK
Sbjct: 242 CTGSDDASCRLFDLRADQELTTYAHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMK 301
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
ER GIL+GHDNRVSCLGVT DGMAVATGSWDSFL+IWN
Sbjct: 302 CERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 153 (58.9 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 42/166 (25%), Positives = 80/166 (48%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
S HTG +S D V+ + D + LWDI G K F GH D ++ P+
Sbjct: 140 SAHTG-YLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFRL 198
Query: 77 FATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G+ DA+ +L+D+R ++ H++ I ++ F +G + G DD +C ++D
Sbjct: 199 FISGACDASAKLWDVREGTCRQTFTGHES---DINAICFFPNGEAICTGSDDASCRLFD- 254
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVAT----GSWDSF-LRIWN 176
++ ++ H++ + C G+T +++ +D F +W+
Sbjct: 255 LRADQELTTYAHES-IIC-GITSVAFSLSGRLLFAGYDDFNCNVWD 298
Score = 124 (48.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 32/160 (20%), Positives = 63/160 (39%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ A D + VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C ++ +++ + S + + G S ++ D C +WD
Sbjct: 113 ACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ + GH L V+ D +G+ D+ ++W+
Sbjct: 173 TGQQKTVFVGHTGDCMSLAVSPDFRLFISGACDASAKLWD 212
>UNIPROTKB|P16520 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0043005
"neuron projection" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0008217 "regulation
of blood pressure" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0006112 "energy reserve metabolic
process" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0071377 "cellular response to glucagon stimulus"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0006112 GO:GO:0004871 GO:GO:0008217 GO:GO:0071377
Pathway_Interaction_DB:cone_pathway EMBL:U47924 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 CTD:2784 KO:K07825 EMBL:M31328
EMBL:U47930 EMBL:Y12050 EMBL:Y12051 EMBL:Y12052 EMBL:Y12053
EMBL:Y12054 EMBL:Y12055 EMBL:Y12056 EMBL:Y12057 EMBL:Y12058
EMBL:AF501884 EMBL:BT009800 EMBL:AY631872 EMBL:BC000115
EMBL:BC002454 IPI:IPI00029143 PIR:A35096 RefSeq:NP_002066.1
UniGene:Hs.631657 ProteinModelPortal:P16520 SMR:P16520 DIP:DIP-601N
IntAct:P16520 STRING:P16520 PhosphoSite:P16520 DMDM:121011
OGP:P16520 PaxDb:P16520 PRIDE:P16520 DNASU:2784
Ensembl:ENST00000229264 GeneID:2784 KEGG:hsa:2784 UCSC:uc001qrc.3
GeneCards:GC12P007021 HGNC:HGNC:4400 HPA:HPA005645 MIM:139130
neXtProt:NX_P16520 PharmGKB:PA176 InParanoid:P16520 OMA:NMCSIYS
OrthoDB:EOG4J118C PhylomeDB:P16520 ChiTaRS:GNB3 GenomeRNAi:2784
NextBio:10967 ArrayExpress:P16520 Bgee:P16520 CleanEx:HS_GNB3
Genevestigator:P16520 GermOnline:ENSG00000111664 Uniprot:P16520
Length = 340
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 127/159 (79%), Positives = 144/159 (90%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTGD MSL+++PD F+SGACDASAKLWD+R+G+C+QTF GHESDINA+ FFPNG A
Sbjct: 182 GHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAI 241
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
TGSDDA+CRLFD+RADQEL +SH++IICGITSVAFS SGRLL AGYDDFNCNVWDSMK
Sbjct: 242 CTGSDDASCRLFDLRADQELICFSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMK 301
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ER GIL+GHDNRVSCLGVT DGMAVATGSWDSFL+IWN
Sbjct: 302 SERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 157 (60.3 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 43/166 (25%), Positives = 81/166 (48%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
S HTG +S D V+ + D + LWDI G K F GH D ++ P+
Sbjct: 140 SAHTG-YLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFNL 198
Query: 77 FATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G+ DA+ +L+D+R ++ H++ I ++ F +G + G DD +C ++D
Sbjct: 199 FISGACDASAKLWDVREGTCRQTFTGHES---DINAICFFPNGEAICTGSDDASCRLFD- 254
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVAT----GSWDSF-LRIWN 176
++ ++ I H++ + C G+T +++ +D F +W+
Sbjct: 255 LRADQELICFSHES-IIC-GITSVAFSLSGRLLFAGYDDFNCNVWD 298
Score = 123 (48.4 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 32/160 (20%), Positives = 64/160 (40%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ A D + VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWATDSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C ++++++ + S + + G S ++ D C +WD
Sbjct: 113 ACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ + GH L V+ D +G+ D+ ++W+
Sbjct: 173 TGQQKTVFVGHTGDCMSLAVSPDFNLFISGACDASAKLWD 212
>UNIPROTKB|F1SLU8 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:FP325257
Ensembl:ENSSSCT00000000743 Uniprot:F1SLU8
Length = 340
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 127/159 (79%), Positives = 143/159 (89%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTGD MSL+++PD + F+SGACDASAKLWD+R+G+C+QTF GHESDINA+ FFPNG A
Sbjct: 182 GHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAI 241
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
TGSDDA+CRLFD+RADQEL YSH++IICGITSVAFS SGRLL AGYDDFNCNVWDSMK
Sbjct: 242 CTGSDDASCRLFDLRADQELTTYSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMK 301
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
ER G L+GHDNRVSCLGVT DGMAVATGSWDSFL+IWN
Sbjct: 302 CERVGTLSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 153 (58.9 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 42/166 (25%), Positives = 80/166 (48%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
S HTG +S D V+ + D + LWDI G K F GH D ++ P+
Sbjct: 140 SAHTG-YLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKL 198
Query: 77 FATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G+ DA+ +L+D+R ++ H++ I ++ F +G + G DD +C ++D
Sbjct: 199 FISGACDASAKLWDVREGTCRQTFTGHES---DINAICFFPNGEAICTGSDDASCRLFD- 254
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVAT----GSWDSF-LRIWN 176
++ ++ H++ + C G+T +++ +D F +W+
Sbjct: 255 LRADQELTTYSHES-IIC-GITSVAFSLSGRLLFAGYDDFNCNVWD 298
Score = 124 (48.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 32/160 (20%), Positives = 63/160 (39%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ A D + VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C ++ +++ + S + + G S ++ D C +WD
Sbjct: 113 ACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ + GH L V+ D +G+ D+ ++W+
Sbjct: 173 TGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWD 212
>RGD|708344 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein), beta
polypeptide 3" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0044297 "cell
body" evidence=IDA] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:708344 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043005 GO:GO:0004871
GO:GO:0044297 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C
EMBL:L29090 EMBL:BC086422 IPI:IPI00204239 PIR:I53871
RefSeq:NP_068630.1 UniGene:Rn.27065 ProteinModelPortal:P52287
SMR:P52287 STRING:P52287 PhosphoSite:P52287 PRIDE:P52287
Ensembl:ENSRNOT00000021481 GeneID:60449 KEGG:rno:60449
UCSC:RGD:708344 InParanoid:P52287 NextBio:612200
ArrayExpress:P52287 Genevestigator:P52287
GermOnline:ENSRNOG00000015541 Uniprot:P52287
Length = 340
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 126/159 (79%), Positives = 144/159 (90%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTGD MSL+++PD + F+SGACDASAKLWD+R+G+C+QTF GHESDINA+ FFPNG A
Sbjct: 182 GHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAI 241
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
TGSDDA+CRLFD+RADQEL YSH++IICGITSVAFS SGRLL AGYDDFNCNVWDS+K
Sbjct: 242 CTGSDDASCRLFDLRADQELTAYSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSLK 301
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
ER G+L+GHDNRVSCLGVT DGMAVATGSWDSFL+IWN
Sbjct: 302 CERVGVLSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 153 (58.9 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 42/166 (25%), Positives = 80/166 (48%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
S HTG +S D V+ + D + LWDI G K F GH D ++ P+
Sbjct: 140 SAHTG-YLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYKL 198
Query: 77 FATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G+ DA+ +L+D+R ++ H++ I ++ F +G + G DD +C ++D
Sbjct: 199 FISGACDASAKLWDVREGTCRQTFTGHES---DINAICFFPNGEAICTGSDDASCRLFD- 254
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVAT----GSWDSF-LRIWN 176
++ ++ H++ + C G+T +++ +D F +W+
Sbjct: 255 LRADQELTAYSHES-IIC-GITSVAFSLSGRLLFAGYDDFNCNVWD 298
Score = 124 (48.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 32/160 (20%), Positives = 63/160 (39%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ A D + VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C ++ +++ + S + + G S ++ D C +WD
Sbjct: 113 ACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ + GH L V+ D +G+ D+ ++W+
Sbjct: 173 TGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWD 212
>UNIPROTKB|F1P8Q5 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:AAEX03015272
ProteinModelPortal:F1P8Q5 Ensembl:ENSCAFT00000023270 Uniprot:F1P8Q5
Length = 340
Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
Identities = 125/159 (78%), Positives = 143/159 (89%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTGD MSL+++PD + F+SGACDASAKLWD+R+G+C+QTF GHESDINA+ FFPNG A
Sbjct: 182 GHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAI 241
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
TGSDDA+CRLFD+RADQEL YS ++IICGITSVAFS SGRLL AGYDDFNCN+WDSMK
Sbjct: 242 CTGSDDASCRLFDLRADQELTAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNIWDSMK 301
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
ER GIL+GHDNRVSCLGVT DGMAVATGSWDSFL++WN
Sbjct: 302 GERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKVWN 340
Score = 157 (60.3 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 44/166 (26%), Positives = 80/166 (48%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
S HTG +S D V+ + D + LWDI G K F GH D ++ P+
Sbjct: 140 SAHTG-YLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKL 198
Query: 77 FATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G+ DA+ +L+D+R ++ H++ I ++ F +G + G DD +C ++D
Sbjct: 199 FISGACDASAKLWDVREGTCRQTFTGHES---DINAICFFPNGEAICTGSDDASCRLFD- 254
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVAT----GSWDSF-LRIWN 176
++ ++ + A D + C G+T +++ +D F IW+
Sbjct: 255 LRADQE-LTAYSDESIIC-GITSVAFSLSGRLLFAGYDDFNCNIWD 298
Score = 124 (48.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 32/160 (20%), Positives = 63/160 (39%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ A D + VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C ++ +++ + S + + G S ++ D C +WD
Sbjct: 113 ACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ + GH L V+ D +G+ D+ ++W+
Sbjct: 173 TGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWD 212
>UNIPROTKB|P79147 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U52916 EMBL:AY751537 EMBL:DQ672621
RefSeq:NP_001003004.1 UniGene:Cfa.5 ProteinModelPortal:P79147
SMR:P79147 PRIDE:P79147 GeneID:403511 KEGG:cfa:403511 CTD:2784
eggNOG:NOG269251 KO:K07825 NextBio:20817024 Uniprot:P79147
Length = 340
Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
Identities = 125/159 (78%), Positives = 143/159 (89%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTGD MSL+++PD + F+SGACDASAKLWD+R+G+C+QTF GHESDINA+ FFPNG A
Sbjct: 182 GHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAI 241
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
TGSDDA+CRLFD+RADQEL YS ++IICGITSVAFS SGRLL AGYDDFNCN+WDSMK
Sbjct: 242 CTGSDDASCRLFDLRADQELTAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNIWDSMK 301
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
ER GIL+GHDNRVSCLGVT DGMAVATGSWDSFL++WN
Sbjct: 302 GERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKVWN 340
Score = 157 (60.3 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 44/166 (26%), Positives = 80/166 (48%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
S HTG +S D V+ + D + LWDI G K F GH D ++ P+
Sbjct: 140 SAHTG-YLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKL 198
Query: 77 FATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G+ DA+ +L+D+R ++ H++ I ++ F +G + G DD +C ++D
Sbjct: 199 FISGACDASAKLWDVREGTCRQTFTGHES---DINAICFFPNGEAICTGSDDASCRLFD- 254
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVAT----GSWDSF-LRIWN 176
++ ++ + A D + C G+T +++ +D F IW+
Sbjct: 255 LRADQE-LTAYSDESIIC-GITSVAFSLSGRLLFAGYDDFNCNIWD 298
Score = 124 (48.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 32/160 (20%), Positives = 63/160 (39%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ A D + VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C ++ +++ + S + + G S ++ D C +WD
Sbjct: 113 ACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ + GH L V+ D +G+ D+ ++W+
Sbjct: 173 TGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWD 212
>MGI|MGI:95785 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein),
beta 3" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0044297 "cell
body" evidence=ISO] [GO:0051020 "GTPase binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95785 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
EMBL:AC002397 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784
KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C EMBL:AK014789 EMBL:BC018239
EMBL:U38494 IPI:IPI00116938 RefSeq:NP_038558.1 UniGene:Mm.68889
ProteinModelPortal:Q61011 SMR:Q61011 STRING:Q61011
PhosphoSite:Q61011 PaxDb:Q61011 PRIDE:Q61011
Ensembl:ENSMUST00000024206 GeneID:14695 KEGG:mmu:14695
InParanoid:Q61011 NextBio:286643 Bgee:Q61011 Genevestigator:Q61011
GermOnline:ENSMUSG00000023439 Uniprot:Q61011
Length = 340
Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
Identities = 126/159 (79%), Positives = 143/159 (89%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTGD MSL+++PD + F+SGACDASAKLWD+R+G+C+QTF GHESDINA+ FFPNG A
Sbjct: 182 GHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAI 241
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
TGSDDA+CRLFD+RADQEL YS ++IICGITSVAFS SGRLL AGYDDFNCNVWDS+K
Sbjct: 242 CTGSDDASCRLFDLRADQELTAYSQESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSLK 301
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
ER GIL+GHDNRVSCLGVT DGMAVATGSWDSFL+IWN
Sbjct: 302 CERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 150 (57.9 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 42/166 (25%), Positives = 79/166 (47%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
S HTG +S D V+ + D + LWDI G K F GH D ++ P+
Sbjct: 140 SAHTG-YLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYKL 198
Query: 77 FATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G+ DA+ +L+D+R ++ H++ I ++ F +G + G DD +C ++D
Sbjct: 199 FISGACDASAKLWDVREGTCRQTFTGHES---DINAICFFPNGEAICTGSDDASCRLFD- 254
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVAT----GSWDSF-LRIWN 176
++ ++ + A + C G+T +++ +D F +W+
Sbjct: 255 LRADQE-LTAYSQESIIC-GITSVAFSLSGRLLFAGYDDFNCNVWD 298
Score = 125 (49.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 32/160 (20%), Positives = 64/160 (40%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ A D + VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C ++++++ + S + + G S ++ D C +WD
Sbjct: 113 ACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ + GH L V+ D +G+ D+ ++W+
Sbjct: 173 TGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWD 212
>UNIPROTKB|F1NLV4 [details] [associations]
symbol:GNB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001750 "photoreceptor outer segment" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0005834 GeneTree:ENSGT00550000074331
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:AADN02040871
IPI:IPI00596111 Ensembl:ENSGALT00000002040
Ensembl:ENSGALT00000040376 Uniprot:F1NLV4
Length = 403
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 123/144 (85%), Positives = 136/144 (94%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHTGDVMSLSLAPD R FVSGACDASAKLWD+R+G C+QTF GHESDINA+ FFPNG A
Sbjct: 181 TGHTGDVMSLSLAPDARCFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA 240
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
FATGSDDATCRLFD+RADQEL +YSHDNIICGITSVAFS+SGRLLLAGYDDFNCNVWD++
Sbjct: 241 FATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL 300
Query: 137 KTERAGILAGHDNRVSCLGVTEDG 160
K +RAG+LAGHDNRVSCLGVT+DG
Sbjct: 301 KADRAGVLAGHDNRVSCLGVTDDG 324
Score = 179 (68.1 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 46/167 (27%), Positives = 84/167 (50%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHTG +S D V+ + D + LWDI G TF GH D+ +++ P+
Sbjct: 140 AGHTG-YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDARC 198
Query: 77 FATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G+ DA+ +L+D+R ++ H++ I ++ F +G G DD C ++D
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHES---DINAICFFPNGNAFATGSDDATCRLFD- 254
Query: 136 MKTERAGILAGHDNRVSCLGVT-----EDGMAVATGSWDSF-LRIWN 176
++ ++ ++ HDN + C G+T + G + G +D F +W+
Sbjct: 255 LRADQELMVYSHDN-IIC-GITSVAFSKSGRLLLAG-YDDFNCNVWD 298
Score = 123 (48.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 32/160 (20%), Positives = 60/160 (37%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ D R VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C +++++ + S + G S ++ D C +WD
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ GH V L + D +G+ D+ ++W+
Sbjct: 173 TGQQTTTFTGHTGDVMSLSLAPDARCFVSGACDASAKLWD 212
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 113/159 (71%), Positives = 130/159 (81%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
S H GDVMS+S++PD F+SGACDA+AKLWD+R G C QTF GHE+DINAV +FPNG +
Sbjct: 188 SDHNGDVMSVSVSPDKNYFISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYFPNGLS 247
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
F TGSDDA+CRLFDIRAD+EL Y+HDNI+CGITSV FS SGR L AGYDDF CNVWD++
Sbjct: 248 FGTGSDDASCRLFDIRADRELMQYTHDNILCGITSVGFSFSGRFLFAGYDDFTCNVWDTL 307
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
K ER L GH NRVSCLGV DGMA+ TGSWDS L+IW
Sbjct: 308 KGERVLSLTGHGNRVSCLGVPTDGMALCTGSWDSLLKIW 346
Score = 157 (60.3 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 44/166 (26%), Positives = 84/166 (50%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+ HTG + D R V+ + D + LWD+ +G+ F H D+ +V+ P+
Sbjct: 147 NSHTGYLSCCRFLND-RQIVTSSGDMTCILWDVENGTKITEFSDHNGDVMSVSVSPDKNY 205
Query: 77 FATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G+ DAT +L+D+R+ + + ++ H+ I +V + +G G DD +C ++D
Sbjct: 206 FISGACDATAKLWDLRSGKCVQTFTGHE---ADINAVQYFPNGLSFGTGSDDASCRLFD- 261
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVAT----GSWDSFL-RIWN 176
++ +R + HDN + C G+T G + + +D F +W+
Sbjct: 262 IRADRELMQYTHDN-ILC-GITSVGFSFSGRFLFAGYDDFTCNVWD 305
Score = 116 (45.9 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 33/160 (20%), Positives = 64/160 (40%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ A D VS + D +WD + P S + + P
Sbjct: 60 GHLAKIYAMHWAEDNVHLVSASQDGKLLVWDGLTTNKVHAIPLRSSWVMTCAYSPTANFV 119
Query: 78 ATGSDDATCRLFDIRA-DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C ++++R+ +Q + + N G S + R ++ D C +WD
Sbjct: 120 ACGGLDNICSIYNLRSREQPIRVCRELNSHTGYLSCCRFLNDRQIVTSSGDMTCILWDVE 179
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + H+ V + V+ D +G+ D+ ++W+
Sbjct: 180 NGTKITEFSDHNGDVMSVSVSPDKNYFISGACDATAKLWD 219
>UNIPROTKB|A5PJS1 [details] [associations]
symbol:GNB5 "GNB5 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ
EMBL:DAAA02028995 EMBL:DAAA02028996 EMBL:BC142218 IPI:IPI00695391
RefSeq:NP_001092540.1 UniGene:Bt.48572 SMR:A5PJS1 MINT:MINT-6824860
STRING:A5PJS1 Ensembl:ENSBTAT00000004896 GeneID:535365
KEGG:bta:535365 InParanoid:A5PJS1 NextBio:20876717 Uniprot:A5PJS1
Length = 353
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 94/160 (58%), Positives = 117/160 (73%)
Query: 18 GHTGDVMSLSLAPDM--RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW 75
GH DV+ L LAP TFVSG CD A +WD+R G C Q F HESDIN+V ++P+G
Sbjct: 193 GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGD 252
Query: 76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
AFA+GSDDATCRL+D+RAD+E+A+YS ++II G +SV FS SGRLL AGY+D+ NVWD
Sbjct: 253 AFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDV 312
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+K R IL GH+NRVS L V+ DG A +GSWD LR+W
Sbjct: 313 LKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 352
Score = 143 (55.4 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 39/164 (23%), Positives = 77/164 (46%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN--GWA 76
HT + + S ++ + D + LWD+ G Q+F GH +D+ + P+ G
Sbjct: 152 HTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT 211
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G D ++D+R+ Q + A +H++ I SV + SG +G DD C ++D
Sbjct: 212 FVSGGCDKKAMVWDMRSGQCVQAFETHES---DINSVRYYPSGDAFASGSDDATCRLYD- 267
Query: 136 MKTERAGILAGHDNRV---SCLGVTEDGMAVATGSWDSFLRIWN 176
++ +R + ++ + S + + G + G D + +W+
Sbjct: 268 LRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWD 311
Score = 125 (49.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 37/165 (22%), Positives = 66/165 (40%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V+ + D R VS + D +WD + + + + A + P+G A
Sbjct: 61 GHGNKVLCMDWCKDKRRLVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAI 120
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICG----ITSVAFSRSGRLLLAGYDDFNCNVW 133
A G D C ++ + D+ M + + +++ +F+ S +L D C +W
Sbjct: 121 ACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALW 180
Query: 134 DSMKTERAGILAGHDNRVSCLGV--TEDGMAVATGSWDSFLRIWN 176
D + GH V CL + +E G +G D +W+
Sbjct: 181 DVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWD 225
Score = 120 (47.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/162 (23%), Positives = 74/162 (45%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDIR-D-----GSCKQTFPGHESDINAVTFFPNGWA 76
VM+ + AP G D ++ + D + K++ H + ++A +F +
Sbjct: 108 VMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQ 167
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
T S D TC L+D+ + Q L + + H +++C +A S +G ++G D VWD
Sbjct: 168 ILTASGDGTCALWDVESGQLLQSFHGHGADVLC--LDLAPSETGNTFVSGGCDKKAMVWD 225
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ H++ ++ + G A A+GS D+ R+++
Sbjct: 226 MRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYD 267
>UNIPROTKB|O14775 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0004871 "signal transducer activity" evidence=NAS] [GO:0007165
"signal transduction" evidence=NAS] [GO:0005834 "heterotrimeric
G-protein complex" evidence=NAS] [GO:0006184 "GTP catabolic
process" evidence=NAS] Reactome:REACT_13685 Reactome:REACT_604
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005634
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
Pathway_Interaction_DB:txa2pathway
Pathway_Interaction_DB:cone_pathway
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
GO:GO:0005834 HOGENOM:HOG000176356 HOVERGEN:HBG000188
InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE
EMBL:AF017656 EMBL:AL117471 EMBL:AF501885 EMBL:AF300650
EMBL:BC013997 IPI:IPI00151607 IPI:IPI00745232 IPI:IPI00967497
PIR:T17256 RefSeq:NP_006569.1 RefSeq:NP_057278.2 UniGene:Hs.155090
ProteinModelPortal:O14775 SMR:O14775 IntAct:O14775
MINT:MINT-1399610 STRING:O14775 PhosphoSite:O14775 PaxDb:O14775
PRIDE:O14775 DNASU:10681 Ensembl:ENST00000261837
Ensembl:ENST00000358784 Ensembl:ENST00000396335 GeneID:10681
KEGG:hsa:10681 UCSC:uc002abr.1 UCSC:uc002abs.1 CTD:10681
GeneCards:GC15M052413 HGNC:HGNC:4401 HPA:CAB032353 HPA:HPA041942
MIM:604447 neXtProt:NX_O14775 PharmGKB:PA28780 InParanoid:O14775
OrthoDB:EOG4XWFXZ PhylomeDB:O14775 ChiTaRS:GNB5 GenomeRNAi:10681
NextBio:40605 ArrayExpress:O14775 Bgee:O14775 CleanEx:HS_GNB5
Genevestigator:O14775 GermOnline:ENSG00000069966 Uniprot:O14775
Length = 395
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 94/160 (58%), Positives = 117/160 (73%)
Query: 18 GHTGDVMSLSLAPDM--RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW 75
GH DV+ L LAP TFVSG CD A +WD+R G C Q F HESDIN+V ++P+G
Sbjct: 235 GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGD 294
Query: 76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
AFA+GSDDATCRL+D+RAD+E+A+YS ++II G +SV FS SGRLL AGY+D+ NVWD
Sbjct: 295 AFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDV 354
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+K R IL GH+NRVS L V+ DG A +GSWD LR+W
Sbjct: 355 LKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 394
Score = 143 (55.4 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 39/164 (23%), Positives = 77/164 (46%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN--GWA 76
HT + + S ++ + D + LWD+ G Q+F GH +D+ + P+ G
Sbjct: 194 HTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT 253
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G D ++D+R+ Q + A +H++ I SV + SG +G DD C ++D
Sbjct: 254 FVSGGCDKKAMVWDMRSGQCVQAFETHES---DINSVRYYPSGDAFASGSDDATCRLYD- 309
Query: 136 MKTERAGILAGHDNRV---SCLGVTEDGMAVATGSWDSFLRIWN 176
++ +R + ++ + S + + G + G D + +W+
Sbjct: 310 LRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWD 353
Score = 125 (49.1 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 37/165 (22%), Positives = 66/165 (40%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V+ + D R VS + D +WD + + + + A + P+G A
Sbjct: 103 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAI 162
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICG----ITSVAFSRSGRLLLAGYDDFNCNVW 133
A G D C ++ + D+ M + + +++ +F+ S +L D C +W
Sbjct: 163 ACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALW 222
Query: 134 DSMKTERAGILAGHDNRVSCLGV--TEDGMAVATGSWDSFLRIWN 176
D + GH V CL + +E G +G D +W+
Sbjct: 223 DVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWD 267
Score = 120 (47.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 38/162 (23%), Positives = 74/162 (45%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDIR-D-----GSCKQTFPGHESDINAVTFFPNGWA 76
VM+ + AP G D ++ + D + K++ H + ++A +F +
Sbjct: 150 VMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQ 209
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
T S D TC L+D+ + Q L + + H +++C +A S +G ++G D VWD
Sbjct: 210 ILTASGDGTCALWDVESGQLLQSFHGHGADVLC--LDLAPSETGNTFVSGGCDKKAMVWD 267
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ H++ ++ + G A A+GS D+ R+++
Sbjct: 268 MRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYD 309
>UNIPROTKB|Q6PNB6 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9986 "Oryctolagus cuniculus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:10681
OrthoDB:EOG4XWFXZ EMBL:AY591252 RefSeq:NP_001075639.1
UniGene:Ocu.3141 ProteinModelPortal:Q6PNB6 SMR:Q6PNB6
GeneID:100008941 Uniprot:Q6PNB6
Length = 353
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 94/160 (58%), Positives = 117/160 (73%)
Query: 18 GHTGDVMSLSLAPDM--RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW 75
GH DV+ L LAP TFVSG CD A +WD+R G C Q F HESDIN+V ++P+G
Sbjct: 193 GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGD 252
Query: 76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
AFA+GSDDATCRL+D+RAD+E+A+YS ++II G +SV FS SGRLL AGY+D+ NVWD
Sbjct: 253 AFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDV 312
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+K R IL GH+NRVS L V+ DG A +GSWD LR+W
Sbjct: 313 LKGARVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 352
Score = 143 (55.4 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 39/164 (23%), Positives = 77/164 (46%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN--GWA 76
HT + + S ++ + D + LWD+ G Q+F GH +D+ + P+ G
Sbjct: 152 HTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT 211
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G D ++D+R+ Q + A +H++ I SV + SG +G DD C ++D
Sbjct: 212 FVSGGCDKKAMVWDMRSGQCVQAFETHES---DINSVRYYPSGDAFASGSDDATCRLYD- 267
Query: 136 MKTERAGILAGHDNRV---SCLGVTEDGMAVATGSWDSFLRIWN 176
++ +R + ++ + S + + G + G D + +W+
Sbjct: 268 LRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWD 311
Score = 125 (49.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 37/165 (22%), Positives = 66/165 (40%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V+ + D R VS + D +WD + + + + A + P+G A
Sbjct: 61 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAI 120
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICG----ITSVAFSRSGRLLLAGYDDFNCNVW 133
A G D C ++ + D+ M + + +++ +F+ S +L D C +W
Sbjct: 121 ACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALW 180
Query: 134 DSMKTERAGILAGHDNRVSCLGV--TEDGMAVATGSWDSFLRIWN 176
D + GH V CL + +E G +G D +W+
Sbjct: 181 DVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWD 225
Score = 120 (47.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/162 (23%), Positives = 74/162 (45%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDIR-D-----GSCKQTFPGHESDINAVTFFPNGWA 76
VM+ + AP G D ++ + D + K++ H + ++A +F +
Sbjct: 108 VMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQ 167
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
T S D TC L+D+ + Q L + + H +++C +A S +G ++G D VWD
Sbjct: 168 ILTASGDGTCALWDVESGQLLQSFHGHGADVLC--LDLAPSETGNTFVSGGCDKKAMVWD 225
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ H++ ++ + G A A+GS D+ R+++
Sbjct: 226 MRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYD 267
>MGI|MGI:101848 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein),
beta 5" species:10090 "Mus musculus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0032794 "GTPase activating protein binding" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0044297 "cell body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:U69145 InterPro:IPR001632 MGI:MGI:101848
GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ EMBL:L34290 EMBL:BC016135
IPI:IPI00127930 IPI:IPI00378017 PIR:A54969 RefSeq:NP_034443.1
RefSeq:NP_619733.1 UniGene:Mm.17604 PDB:2PBI PDBsum:2PBI
ProteinModelPortal:P62881 SMR:P62881 DIP:DIP-264N IntAct:P62881
STRING:P62881 PhosphoSite:P62881 PaxDb:P62881 PRIDE:P62881
Ensembl:ENSMUST00000076889 GeneID:14697 KEGG:mmu:14697
UCSC:uc009qry.1 InParanoid:P62881 EvolutionaryTrace:P62881
NextBio:286651 Bgee:P62881 Genevestigator:P62881
GermOnline:ENSMUSG00000032192 Uniprot:P62881
Length = 395
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 93/160 (58%), Positives = 117/160 (73%)
Query: 18 GHTGDVMSLSLAPDM--RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW 75
GH DV+ L LAP TFVSG CD A +WD+R G C Q F HESD+N+V ++P+G
Sbjct: 235 GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGD 294
Query: 76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
AFA+GSDDATCRL+D+RAD+E+A+YS ++II G +SV FS SGRLL AGY+D+ NVWD
Sbjct: 295 AFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDV 354
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+K R IL GH+NRVS L V+ DG A +GSWD LR+W
Sbjct: 355 LKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 394
Score = 142 (55.0 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 38/164 (23%), Positives = 77/164 (46%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN--GWA 76
HT + + S ++ + D + LWD+ G Q+F GH +D+ + P+ G
Sbjct: 194 HTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT 253
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G D ++D+R+ Q + A +H++ + SV + SG +G DD C ++D
Sbjct: 254 FVSGGCDKKAMVWDMRSGQCVQAFETHES---DVNSVRYYPSGDAFASGSDDATCRLYD- 309
Query: 136 MKTERAGILAGHDNRV---SCLGVTEDGMAVATGSWDSFLRIWN 176
++ +R + ++ + S + + G + G D + +W+
Sbjct: 310 LRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWD 353
Score = 125 (49.1 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 37/165 (22%), Positives = 66/165 (40%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V+ + D R VS + D +WD + + + + A + P+G A
Sbjct: 103 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAI 162
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICG----ITSVAFSRSGRLLLAGYDDFNCNVW 133
A G D C ++ + D+ M + + +++ +F+ S +L D C +W
Sbjct: 163 ACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALW 222
Query: 134 DSMKTERAGILAGHDNRVSCLGV--TEDGMAVATGSWDSFLRIWN 176
D + GH V CL + +E G +G D +W+
Sbjct: 223 DVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWD 267
Score = 121 (47.7 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 39/162 (24%), Positives = 74/162 (45%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDIR-D-----GSCKQTFPGHESDINAVTFFPNGWA 76
VM+ + AP G D ++ + D + K++ H + ++A +F +
Sbjct: 150 VMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQ 209
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
T S D TC L+D+ + Q L + + H +++C +A S +G ++G D VWD
Sbjct: 210 ILTASGDGTCALWDVESGQLLQSFHGHGADVLC--LDLAPSETGNTFVSGGCDKKAMVWD 267
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ H++ V+ + G A A+GS D+ R+++
Sbjct: 268 MRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYD 309
>RGD|620759 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein), beta
5" species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IC;ISO;TAS] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:620759
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0004871 GO:GO:0044297 PRINTS:PR00319 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
CTD:10681 EMBL:AF001953 EMBL:AY552803 EMBL:BC089221 EMBL:AF022086
IPI:IPI00212659 RefSeq:NP_113958.1 UniGene:Rn.23042
ProteinModelPortal:P62882 SMR:P62882 PhosphoSite:P62882
PRIDE:P62882 GeneID:83579 KEGG:rno:83579 UCSC:RGD:620759
NextBio:616103 Genevestigator:P62882 Uniprot:P62882
Length = 353
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 93/160 (58%), Positives = 117/160 (73%)
Query: 18 GHTGDVMSLSLAPDM--RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW 75
GH DV+ L LAP TFVSG CD A +WD+R G C Q F HESD+N+V ++P+G
Sbjct: 193 GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGD 252
Query: 76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
AFA+GSDDATCRL+D+RAD+E+A+YS ++II G +SV FS SGRLL AGY+D+ NVWD
Sbjct: 253 AFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDV 312
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+K R IL GH+NRVS L V+ DG A +GSWD LR+W
Sbjct: 313 LKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 352
Score = 142 (55.0 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 38/164 (23%), Positives = 77/164 (46%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN--GWA 76
HT + + S ++ + D + LWD+ G Q+F GH +D+ + P+ G
Sbjct: 152 HTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT 211
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G D ++D+R+ Q + A +H++ + SV + SG +G DD C ++D
Sbjct: 212 FVSGGCDKKAMVWDMRSGQCVQAFETHES---DVNSVRYYPSGDAFASGSDDATCRLYD- 267
Query: 136 MKTERAGILAGHDNRV---SCLGVTEDGMAVATGSWDSFLRIWN 176
++ +R + ++ + S + + G + G D + +W+
Sbjct: 268 LRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWD 311
Score = 125 (49.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 37/165 (22%), Positives = 66/165 (40%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V+ + D R VS + D +WD + + + + A + P+G A
Sbjct: 61 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAI 120
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICG----ITSVAFSRSGRLLLAGYDDFNCNVW 133
A G D C ++ + D+ M + + +++ +F+ S +L D C +W
Sbjct: 121 ACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALW 180
Query: 134 DSMKTERAGILAGHDNRVSCLGV--TEDGMAVATGSWDSFLRIWN 176
D + GH V CL + +E G +G D +W+
Sbjct: 181 DVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWD 225
Score = 121 (47.7 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 39/162 (24%), Positives = 74/162 (45%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDIR-D-----GSCKQTFPGHESDINAVTFFPNGWA 76
VM+ + AP G D ++ + D + K++ H + ++A +F +
Sbjct: 108 VMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQ 167
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
T S D TC L+D+ + Q L + + H +++C +A S +G ++G D VWD
Sbjct: 168 ILTASGDGTCALWDVESGQLLQSFHGHGADVLC--LDLAPSETGNTFVSGGCDKKAMVWD 225
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ H++ V+ + G A A+GS D+ R+++
Sbjct: 226 MRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYD 267
>UNIPROTKB|F1RZC0 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 OMA:ATDGLHE EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000005105 Uniprot:F1RZC0
Length = 396
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 94/160 (58%), Positives = 117/160 (73%)
Query: 18 GHTGDVMSLSLAPDM--RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW 75
GH DV+ L LAP TFVSG CD A +WD+R G C Q F HESDIN+V ++P+G
Sbjct: 236 GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQAFETHESDINSVRYYPSGD 295
Query: 76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
AFA+GSDDATCRL+D+RAD+E+A+YS ++II G +SV FS SGRLL AGY+D+ NVWD
Sbjct: 296 AFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDV 355
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+K R IL GH+NRVS L V+ DG A +GSWD LR+W
Sbjct: 356 LKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 395
Score = 118 (46.6 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 37/166 (22%), Positives = 67/166 (40%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V+ + D R VS + D +WD + + + + A + P+G A
Sbjct: 103 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAI 162
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICG----ITSVAFSRSG-RLLLAGYDDFNCNV 132
A G D C ++ + D+ M + + +++ +F+ S + +L D C +
Sbjct: 163 ACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQQILTASGDGTCAL 222
Query: 133 WDSMKTERAGILAGHDNRVSCLGV--TEDGMAVATGSWDSFLRIWN 176
WD + GH V CL + +E G +G D +W+
Sbjct: 223 WDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWD 268
Score = 110 (43.8 bits), Expect = 0.00031, P = 0.00031
Identities = 38/163 (23%), Positives = 74/163 (45%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDIR-D-----GSCKQTFPGHESDINAVTFFPNGWA 76
VM+ + AP G D ++ + D + K++ H + ++A +F +
Sbjct: 150 VMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQ 209
Query: 77 -FATGSDDATCRLFDIRADQEL-AMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
T S D TC L+D+ + Q L + + H +++C +A S +G ++G D VW
Sbjct: 210 QILTASGDGTCALWDVESGQLLQSFHGHGADVLC--LDLAPSETGNTFVSGGCDKKAMVW 267
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D + H++ ++ + G A A+GS D+ R+++
Sbjct: 268 DMRSGQCIQAFETHESDINSVRYYPSGDAFASGSDDATCRLYD 310
>UNIPROTKB|I3LLQ2 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000024996 Uniprot:I3LLQ2
Length = 354
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 94/160 (58%), Positives = 117/160 (73%)
Query: 18 GHTGDVMSLSLAPDM--RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW 75
GH DV+ L LAP TFVSG CD A +WD+R G C Q F HESDIN+V ++P+G
Sbjct: 194 GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQAFETHESDINSVRYYPSGD 253
Query: 76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
AFA+GSDDATCRL+D+RAD+E+A+YS ++II G +SV FS SGRLL AGY+D+ NVWD
Sbjct: 254 AFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDV 313
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+K R IL GH+NRVS L V+ DG A +GSWD LR+W
Sbjct: 314 LKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353
Score = 118 (46.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 37/166 (22%), Positives = 67/166 (40%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V+ + D R VS + D +WD + + + + A + P+G A
Sbjct: 61 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAI 120
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICG----ITSVAFSRSG-RLLLAGYDDFNCNV 132
A G D C ++ + D+ M + + +++ +F+ S + +L D C +
Sbjct: 121 ACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQQILTASGDGTCAL 180
Query: 133 WDSMKTERAGILAGHDNRVSCLGV--TEDGMAVATGSWDSFLRIWN 176
WD + GH V CL + +E G +G D +W+
Sbjct: 181 WDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWD 226
Score = 110 (43.8 bits), Expect = 0.00026, P = 0.00026
Identities = 38/163 (23%), Positives = 74/163 (45%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDIR-D-----GSCKQTFPGHESDINAVTFFPNGWA 76
VM+ + AP G D ++ + D + K++ H + ++A +F +
Sbjct: 108 VMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQ 167
Query: 77 -FATGSDDATCRLFDIRADQEL-AMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
T S D TC L+D+ + Q L + + H +++C +A S +G ++G D VW
Sbjct: 168 QILTASGDGTCALWDVESGQLLQSFHGHGADVLC--LDLAPSETGNTFVSGGCDKKAMVW 225
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D + H++ ++ + G A A+GS D+ R+++
Sbjct: 226 DMRSGQCIQAFETHESDINSVRYYPSGDAFASGSDDATCRLYD 268
>UNIPROTKB|E1BVN4 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 EMBL:AADN02045388
EMBL:AADN02045389 IPI:IPI00572484 RefSeq:XP_413801.2
ProteinModelPortal:E1BVN4 Ensembl:ENSGALT00000007455 GeneID:415417
KEGG:gga:415417 NextBio:20819029 Uniprot:E1BVN4
Length = 395
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 94/160 (58%), Positives = 118/160 (73%)
Query: 18 GHTGDVMSLSLAPDM--RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW 75
GH DV+ L LAP TFVSG CD A +WD+R G C Q+F H+SDIN+V ++P+G
Sbjct: 235 GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQSFETHDSDINSVRYYPSGD 294
Query: 76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
AFA+GSDDATCRL+D+RAD+E+A+YS ++II G +SV FS SGRLL AGY+D+ NVWD
Sbjct: 295 AFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDV 354
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+K R IL GH+NRVS L V+ DG A +GSWD LRIW
Sbjct: 355 LKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRIW 394
Score = 147 (56.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 39/164 (23%), Positives = 77/164 (46%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN--GWA 76
HT + + S ++ + D + LWD+ G Q+F GH +D+ + P+ G
Sbjct: 194 HTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT 253
Query: 77 FATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F +G D ++D+R+ Q + + +HD+ I SV + SG +G DD C ++D
Sbjct: 254 FVSGGCDKKAMVWDMRSGQCIQSFETHDS---DINSVRYYPSGDAFASGSDDATCRLYD- 309
Query: 136 MKTERAGILAGHDNRV---SCLGVTEDGMAVATGSWDSFLRIWN 176
++ +R + ++ + S + + G + G D + +W+
Sbjct: 310 LRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWD 353
Score = 125 (49.1 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 37/165 (22%), Positives = 66/165 (40%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V+ + D R VS + D +WD + + + + A + P+G A
Sbjct: 103 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAI 162
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICG----ITSVAFSRSGRLLLAGYDDFNCNVW 133
A G D C ++ + D+ M + + +++ +F+ S +L D C +W
Sbjct: 163 ACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALW 222
Query: 134 DSMKTERAGILAGHDNRVSCLGV--TEDGMAVATGSWDSFLRIWN 176
D + GH V CL + +E G +G D +W+
Sbjct: 223 DVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWD 267
Score = 122 (48.0 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 39/162 (24%), Positives = 74/162 (45%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDIR-D-----GSCKQTFPGHESDINAVTFFPNGWA 76
VM+ + AP G D ++ + D + K++ H + ++A +F +
Sbjct: 150 VMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQ 209
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
T S D TC L+D+ + Q L + + H +++C +A S +G ++G D VWD
Sbjct: 210 ILTASGDGTCALWDVESGQLLQSFHGHGADVLC--LDLAPSETGNTFVSGGCDKKAMVWD 267
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ HD+ ++ + G A A+GS D+ R+++
Sbjct: 268 MRSGQCIQSFETHDSDINSVRYYPSGDAFASGSDDATCRLYD 309
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 88/160 (55%), Positives = 126/160 (78%)
Query: 18 GHTGDVMSLSLAPDM--RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW 75
GH+GDVM++ LAP+ TFVSG+CD A +WD+R G Q+F GH+SD+N+V F P G
Sbjct: 198 GHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGD 257
Query: 76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
A ATGSDD++CRL+D+RAD+E+A+++ ++II G+ SV FS SGRLL AGY+D+ N+WD+
Sbjct: 258 AIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNLWDT 317
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+K+ER +L GH+N+VSC+ V+ DG A++TGSWD +R+W
Sbjct: 318 LKSERVCLLYGHENKVSCVQVSPDGTALSTGSWDYTIRVW 357
Score = 136 (52.9 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 40/159 (25%), Positives = 71/159 (44%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDI---RDGSCKQTFPGHESDINAVTFFPNG-WAFA 78
+M+ + AP G D ++ I + + K+ G + + +PN
Sbjct: 115 IMACAYAPSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQIL 174
Query: 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
TGS D+TC L+D+ + Q L + + H + I +A + +G ++G D +WD
Sbjct: 175 TGSGDSTCALWDVESGQLLQSFHGHSGDVMAI-DLAPNETGNTFVSGSCDRMAFIWDMRS 233
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
GH + V+ + G A+ATGS DS R+++
Sbjct: 234 GHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYD 272
Score = 125 (49.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 38/163 (23%), Positives = 64/163 (39%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V+ +PD R +S + D +WD + + + I A + P+G
Sbjct: 68 GHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGNFV 127
Query: 78 ATGSDDATCRLFDIRADQELAMYSHD--NIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
A G D ++ I +D+E+A ++ + S + +L G D C +WD
Sbjct: 128 ACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDV 187
Query: 136 MKTERAGILAGHDNRVSCLGVT--EDGMAVATGSWDSFLRIWN 176
+ GH V + + E G +GS D IW+
Sbjct: 188 ESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWD 230
>ZFIN|ZDB-GENE-070112-342 [details] [associations]
symbol:gnb5a "guanine nucleotide binding protein (G
protein), beta 5a" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 ZFIN:ZDB-GENE-070112-342 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE OrthoDB:EOG4XWFXZ EMBL:AL954697 EMBL:BC129375
IPI:IPI00512905 RefSeq:NP_001073650.1 UniGene:Dr.108630 SMR:A1L271
Ensembl:ENSDART00000027720 GeneID:562813 KEGG:dre:562813 CTD:562813
InParanoid:A1L271 NextBio:20884602 Uniprot:A1L271
Length = 355
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 93/160 (58%), Positives = 117/160 (73%)
Query: 18 GHTGDVMSLSLAPDM--RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW 75
GH DV+ L LAP TFVSG CD A +WD+R G C Q+F H+SDIN+V ++P+G
Sbjct: 195 GHAADVLCLDLAPSETGNTFVSGGCDKKACVWDMRTGQCVQSFESHDSDINSVRYYPSGD 254
Query: 76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
AFA+GSDDATCRL+D+RAD+E+A+YS ++II G +SV FS SGRLL GY+D+ NVWD
Sbjct: 255 AFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFGGYNDYTINVWDV 314
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+K R IL GH+NRVS L V+ DG A +GSWD LRIW
Sbjct: 315 LKGARVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRIW 354
Score = 147 (56.8 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 47/181 (25%), Positives = 83/181 (45%)
Query: 5 LDKSALLGSPAASG--HTGDVMSLSLA-PDMRTFVSGACDASAKLWDIRDGSCKQTFPGH 61
LDK+ L + S HT + + DM+ S D + LWD+ G Q+F GH
Sbjct: 138 LDKNENLAAKKKSVAMHTNYLSACCFTNSDMQILTSSG-DGTCALWDVESGQMLQSFHGH 196
Query: 62 ESDINAVTFFPN--GWAFATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSG 118
+D+ + P+ G F +G D ++D+R Q + + SHD+ I SV + SG
Sbjct: 197 AADVLCLDLAPSETGNTFVSGGCDKKACVWDMRTGQCVQSFESHDS---DINSVRYYPSG 253
Query: 119 RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRV---SCLGVTEDGMAVATGSWDSFLRIW 175
+G DD C ++D ++ +R + ++ + S + + G + G D + +W
Sbjct: 254 DAFASGSDDATCRLYD-LRADREVAIYSKESIIFGASSVDFSLSGRLLFGGYNDYTINVW 312
Query: 176 N 176
+
Sbjct: 313 D 313
Score = 121 (47.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 40/168 (23%), Positives = 67/168 (39%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V+ + D R VS + D +WD + + + + A + P+G A
Sbjct: 63 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDAFTTNKEHAVTMPCTWVMACAYAPSGCAV 122
Query: 78 ATGSDDATCRLFDIRAD--QELA-----MYSHDNIICGITSVAFSRSGRLLLAGYDDFNC 130
A G D C ++ + D + LA + H N + ++ F+ S +L D C
Sbjct: 123 ACGGLDNKCSVYPLSLDKNENLAAKKKSVAMHTNYL---SACCFTNSDMQILTSSGDGTC 179
Query: 131 NVWDSMKTERAGILAGHDNRVSCLGV--TEDGMAVATGSWDSFLRIWN 176
+WD + GH V CL + +E G +G D +W+
Sbjct: 180 ALWDVESGQMLQSFHGHAADVLCLDLAPSETGNTFVSGGCDKKACVWD 227
Score = 120 (47.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 39/162 (24%), Positives = 73/162 (45%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDIR-D-----GSCKQTFPGHESDINAVTFFPNGWA 76
VM+ + AP G D ++ + D + K++ H + ++A F +
Sbjct: 110 VMACAYAPSGCAVACGGLDNKCSVYPLSLDKNENLAAKKKSVAMHTNYLSACCFTNSDMQ 169
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
T S D TC L+D+ + Q L + + H +++C +A S +G ++G D VWD
Sbjct: 170 ILTSSGDGTCALWDVESGQMLQSFHGHAADVLC--LDLAPSETGNTFVSGGCDKKACVWD 227
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ HD+ ++ + G A A+GS D+ R+++
Sbjct: 228 MRTGQCVQSFESHDSDINSVRYYPSGDAFASGSDDATCRLYD 269
>WB|WBGene00001680 [details] [associations]
symbol:gpb-2 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0030163 "protein catabolic
process" evidence=IMP] [GO:0008277 "regulation of G-protein coupled
receptor protein signaling pathway" evidence=IGI] [GO:0046662
"regulation of oviposition" evidence=IMP] [GO:0040012 "regulation
of locomotion" evidence=IMP] [GO:0007631 "feeding behavior"
evidence=IMP] [GO:0007212 "dopamine receptor signaling pathway"
evidence=IMP] [GO:0032094 "response to food" evidence=IMP]
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IGI;IMP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0040007 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007212
GO:GO:0007631 GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0040012 GO:GO:0046662
GO:GO:0043051 GO:GO:0032094 GO:GO:0007213 GO:GO:0030163
GO:GO:0008277 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 InterPro:IPR016346 PIRSF:PIRSF002394
EMBL:AF291847 EMBL:Z71263 PIR:T22478 RefSeq:NP_492072.1
UniGene:Cel.18555 ProteinModelPortal:Q20636 SMR:Q20636
STRING:Q20636 PaxDb:Q20636 EnsemblMetazoa:F52A8.2.1
EnsemblMetazoa:F52A8.2.2 GeneID:172483 KEGG:cel:CELE_F52A8.2
UCSC:F52A8.2 CTD:172483 WormBase:F52A8.2 InParanoid:Q20636
KO:K04539 OMA:ATDGLHE NextBio:875701 Uniprot:Q20636
Length = 356
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 85/160 (53%), Positives = 111/160 (69%)
Query: 18 GHTGDVMSLSLAP-DM-RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW 75
GHTGDV ++ + D TF+S D + +WDIR G C Q+F GHE+DIN V F PNG
Sbjct: 196 GHTGDVFAIDVPKCDTGNTFISAGADKHSLVWDIRSGQCVQSFEGHEADINTVRFHPNGD 255
Query: 76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
AFATGSDDATCRLFD+RAD+++ +Y ++I+ + V FS SGR+L AGY D+ VWDS
Sbjct: 256 AFATGSDDATCRLFDLRADRQVCVYEKESILFPVNGVDFSLSGRILFAGYGDYRVGVWDS 315
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+K R +L GH+NR+SCL + DG AV + SWD +RIW
Sbjct: 316 LKCARHSVLYGHENRISCLRTSPDGTAVCSASWDCTIRIW 355
Score = 120 (47.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 31/124 (25%), Positives = 55/124 (44%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTF--FPNGWA 76
HT + + ++G+ D++ +WD+ G Q F GH D+ A+ G
Sbjct: 155 HTSYMSCCTFLRSDNLILTGSGDSTCAIWDVESGQLIQNFHGHTGDVFAIDVPKCDTGNT 214
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
F + D ++DIR+ Q + S + I +V F +G G DD C ++D +
Sbjct: 215 FISAGADKHSLVWDIRSGQ--CVQSFEGHEADINTVRFHPNGDAFATGSDDATCRLFD-L 271
Query: 137 KTER 140
+ +R
Sbjct: 272 RADR 275
Score = 116 (45.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 37/159 (23%), Positives = 67/159 (42%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDI--RDGSC--KQTFPGHESDINAVTFFPNGWAFA 78
VM+ + +P + G D + + D K+ H S ++ TF +
Sbjct: 113 VMACAFSPSSQMIACGGLDNKCSVVPLSFEDDIIQKKRQVATHTSYMSCCTFLRSDNLIL 172
Query: 79 TGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
TGS D+TC ++D+ + Q + + H + I + AG D + VWD
Sbjct: 173 TGSGDSTCAIWDVESGQLIQNFHGHTGDVFAIDVPKCDTGNTFISAGADKHSL-VWDIRS 231
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ GH+ ++ + +G A ATGS D+ R+++
Sbjct: 232 GQCVQSFEGHEADINTVRFHPNGDAFATGSDDATCRLFD 270
Score = 112 (44.5 bits), Expect = 0.00015, P = 0.00015
Identities = 35/163 (21%), Positives = 60/163 (36%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH G V+ + + D R VS + D +WD + + + + A F P+
Sbjct: 66 GHVGKVLCMDWSLDKRHIVSSSQDGKVIVWDGFTTNKEHALTMPTTWVMACAFSPSSQMI 125
Query: 78 ATGSDDATCRLFDIRADQELAMYSHD--NIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
A G D C + + + ++ ++ F RS L+L G D C +WD
Sbjct: 126 ACGGLDNKCSVVPLSFEDDIIQKKRQVATHTSYMSCCTFLRSDNLILTGSGDSTCAIWDV 185
Query: 136 MKTERAGILAGHDNRVSCLGVT--EDGMAVATGSWDSFLRIWN 176
+ GH V + V + G + D +W+
Sbjct: 186 ESGQLIQNFHGHTGDVFAIDVPKCDTGNTFISAGADKHSLVWD 228
>UNIPROTKB|Q40687 [details] [associations]
symbol:LOC_Os03g46650 "Guanine nucleotide-binding protein
subunit beta" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEP;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005783 GO:GO:0005886 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0048527 GO:GO:0009817 GO:GO:0009845
GO:GO:0009887 GO:GO:0004871 GO:GO:0010154 GO:GO:0030968
GO:GO:0009867 PRINTS:PR00319 GO:GO:0080008 HOGENOM:HOG000176356
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X89737
EMBL:AC133930 PIR:T03765 ProteinModelPortal:Q40687 IntAct:Q40687
STRING:Q40687 EnsemblPlants:LOC_Os03g46650.1 Gramene:Q40687
Uniprot:Q40687
Length = 380
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 90/178 (50%), Positives = 120/178 (67%)
Query: 9 ALLGSPAASGHTGDVMSLSL-APDMRTFVSGACDASAKLWDIRDGS-CKQTFPGHESDIN 66
++ G SGHT DV+SLS+ + + FVSG+CDA+ +LWDIR S +T+ GHE DIN
Sbjct: 194 SIFGGEFPSGHTADVLSLSINSSNSNMFVSGSCDATVRLWDIRIASRAVRTYHGHEGDIN 253
Query: 67 AVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS-----HDNIICGITSVAFSRSGRLL 121
+V FFP+G F TGSDD TCRLFD+R +L +YS +DN + +TS+AFS SGRLL
Sbjct: 254 SVKFFPDGQRFGTGSDDGTCRLFDVRTGHQLQVYSREPDRNDNELPTVTSIAFSISGRLL 313
Query: 122 LAGYDDFNCNVWDSMKTE---RAGILAG-HDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
AGY + +C VWD++ E G L H+ R+SCLG++ DG A+ TGSWD L+IW
Sbjct: 314 FAGYSNGDCYVWDTLLAEVVLNLGNLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIW 371
Score = 144 (55.7 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 43/127 (33%), Positives = 62/127 (48%)
Query: 17 SGHTGDVMSLSLAPDMRT-FVSGACDASAKLWDIRDGSCKQTF----P-GHESDINAVTF 70
+GH G V S PD T ++ + D + LWD+ G F P GH +D+ +++
Sbjct: 154 TGHKGYVSSCQYVPDQETRLITSSGDQTCVLWDVTTGQRISIFGGEFPSGHTADVLSLSI 213
Query: 71 -FPNGWAFATGSDDATCRLFDIR-ADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDD 127
N F +GS DAT RL+DIR A + + Y H+ I SV F G+ G DD
Sbjct: 214 NSSNSNMFVSGSCDATVRLWDIRIASRAVRTYHGHEG---DINSVKFFPDGQRFGTGSDD 270
Query: 128 FNCNVWD 134
C ++D
Sbjct: 271 GTCRLFD 277
Score = 130 (50.8 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 43/173 (24%), Positives = 74/173 (42%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+G V SL P+ VS + D +W+ H + F PNG +
Sbjct: 64 GHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMTCAFAPNGQSV 123
Query: 78 ATGSDDATCRLFDI--RADQELAMYSHDNIICG----ITSVAF--SRSGRLLLAGYDDFN 129
A G D+ C +F++ +AD++ I+ G ++S + + RL+ + D
Sbjct: 124 ACGGLDSACSIFNLNSQADRD-GNIPVSRILTGHKGYVSSCQYVPDQETRLITSSGDQ-T 181
Query: 130 CNVWDSMKTERAGIL-----AGHDNRVSCLGVTEDGMAV-ATGSWDSFLRIWN 176
C +WD +R I +GH V L + + +GS D+ +R+W+
Sbjct: 182 CVLWDVTTGQRISIFGGEFPSGHTADVLSLSINSSNSNMFVSGSCDATVRLWD 234
Score = 129 (50.5 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 38/171 (22%), Positives = 79/171 (46%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDI-----RDGSC--KQTFPGHESDINAVTFF 71
H VM+ + AP+ ++ G D++ ++++ RDG+ + GH+ +++ +
Sbjct: 107 HCPWVMTCAFAPNGQSVACGGLDSACSIFNLNSQADRDGNIPVSRILTGHKGYVSSCQYV 166
Query: 72 PNGWA-FATGSDDATCRLFDIRADQELAMYSHD---NIICGITSVAFSRSG-RLLLAGYD 126
P+ T S D TC L+D+ Q ++++ + + S++ + S + ++G
Sbjct: 167 PDQETRLITSSGDQTCVLWDVTTGQRISIFGGEFPSGHTADVLSLSINSSNSNMFVSGSC 226
Query: 127 DFNCNVWDSMKTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D +WD RA GH+ ++ + DG TGS D R+++
Sbjct: 227 DATVRLWDIRIASRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFD 277
>UNIPROTKB|P93397 [details] [associations]
symbol:P93397 "Guanine nucleotide-binding protein subunit
beta-1" species:4097 "Nicotiana tabacum" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:Z84820 PIR:T04086 ProteinModelPortal:P93397
IntAct:P93397 Uniprot:P93397
Length = 377
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 86/178 (48%), Positives = 120/178 (67%)
Query: 7 KSALLGSPAASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGS-CKQTFPGHESD 64
++++ G SGHT DV S+S++ + R FVSG+CD +A+LWD R S ++TF GHE D
Sbjct: 191 RTSVFGGEFQSGHTADVQSVSISSSNPRLFVSGSCDTTARLWDTRVASRAQRTFYGHEGD 250
Query: 65 INAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY--SH-DNIICGITSVAFSRSGRLL 121
+N V FFP+G F TGS+D TCRLFDIR + +L +Y H D I +TS+AFS SGRLL
Sbjct: 251 VNTVKFFPDGNRFGTGSEDGTCRLFDIRTEHQLQVYYQPHGDGDIPHVTSMAFSISGRLL 310
Query: 122 LAGYDDFNCNVWDSMKTE----RAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
GY + +C VWD++ + G+ H+ R+SCLG++ DG A+ TGSWD+ L+IW
Sbjct: 311 FVGYSNGDCYVWDTLLAKVVLNLGGVQNSHEGRISCLGLSADGSALCTGSWDTNLKIW 368
Score = 138 (53.6 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 41/132 (31%), Positives = 60/132 (45%)
Query: 17 SGHTGDVMSLSLAPDMRT-FVSGACDASAKLWDIRDGSCKQTF-----PGHESDINAVTF 70
SGH G V S PD T ++ + D + LWDI G F GH +D+ +V+
Sbjct: 153 SGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVQSVSI 212
Query: 71 FP-NGWAFATGSDDATCRLFDIRADQ--ELAMYSHDNIICGITSVAFSRSGRLLLAGYDD 127
N F +GS D T RL+D R + Y H+ + +V F G G +D
Sbjct: 213 SSSNPRLFVSGSCDTTARLWDTRVASRAQRTFYGHEG---DVNTVKFFPDGNRFGTGSED 269
Query: 128 FNCNVWDSMKTE 139
C ++D ++TE
Sbjct: 270 GTCRLFD-IRTE 280
Score = 128 (50.1 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 40/167 (23%), Positives = 76/167 (45%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDI-----RDGS--CKQTFPGHESDINAVTFFPN-G 74
VM+ + +P ++ G D+ ++++ +DG+ + GH+ +++ + P+
Sbjct: 110 VMTCAFSPSGQSVACGGLDSVCSIFNLNSPIDKDGNHPVSRMLSGHKGYVSSCQYVPDED 169
Query: 75 WAFATGSDDATCRLFDIRADQELAMYSHD---NIICGITSVAFSRSG-RLLLAGYDDFNC 130
T S D TC L+DI +++ + + SV+ S S RL ++G D
Sbjct: 170 THLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVQSVSISSSNPRLFVSGSCDTTA 229
Query: 131 NVWDSMKTERAG-ILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+WD+ RA GH+ V+ + DG TGS D R+++
Sbjct: 230 RLWDTRVASRAQRTFYGHEGDVNTVKFFPDGNRFGTGSEDGTCRLFD 276
Score = 109 (43.4 bits), Expect = 0.00040, P = 0.00040
Identities = 38/172 (22%), Positives = 72/172 (41%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG V SL P+ VS + D +W+ + + F P+G +
Sbjct: 63 GHTGKVYSLDWTPEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPSGQSV 122
Query: 78 ATGSDDATCRLFDIRA--DQELAMYSHDNIICG----ITSVAF-SRSGRLLLAGYDDFNC 130
A G D+ C +F++ + D++ + ++ G ++S + L+ D C
Sbjct: 123 ACGGLDSVCSIFNLNSPIDKD-GNHPVSRMLSGHKGYVSSCQYVPDEDTHLITSSGDQTC 181
Query: 131 NVWD---SMKTERAG--ILAGHDNRVSCLGVTEDGMAV-ATGSWDSFLRIWN 176
+WD ++T G +GH V + ++ + +GS D+ R+W+
Sbjct: 182 VLWDITTGLRTSVFGGEFQSGHTADVQSVSISSSNPRLFVSGSCDTTARLWD 233
>TAIR|locus:2139489 [details] [associations]
symbol:AGB1 "AT4G34460" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISS;IDA;IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0010154 "fruit development" evidence=IMP]
[GO:0072593 "reactive oxygen species metabolic process"
evidence=IMP] [GO:0050832 "defense response to fungus"
evidence=RCA;IMP] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA;IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0009845
"seed germination" evidence=IEP;IMP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0009723 "response to ethylene stimulus"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IMP] [GO:0048527 "lateral root development"
evidence=RCA;IMP] [GO:0009991 "response to extracellular stimulus"
evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009617 "response to
bacterium" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009738 "abscisic acid mediated
signaling pathway" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0048193 "Golgi vesicle transport" evidence=RCA] [GO:0051707
"response to other organism" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005783
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009738 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0048527 GO:GO:0009817
GO:GO:0009845 GO:GO:0009887 GO:GO:0009788 GO:GO:0004871
GO:GO:0009991 GO:GO:0072593 GO:GO:0010154 EMBL:AL161585
GO:GO:0030968 EMBL:AL023094 GO:GO:0009867 PRINTS:PR00319
GO:GO:0080008 GO:GO:0005834 HOGENOM:HOG000176356 KO:K04536
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:GACDATS EMBL:U12232
IPI:IPI00545688 PIR:T05266 RefSeq:NP_195172.1 UniGene:At.22855
ProteinModelPortal:P49177 SMR:P49177 DIP:DIP-40108N IntAct:P49177
STRING:P49177 PaxDb:P49177 PRIDE:P49177 EnsemblPlants:AT4G34460.1
GeneID:829597 KEGG:ath:AT4G34460 GeneFarm:2858 TAIR:At4g34460
InParanoid:P49177 PhylomeDB:P49177 ProtClustDB:CLSN2685906
Genevestigator:P49177 Uniprot:P49177
Length = 377
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 89/178 (50%), Positives = 120/178 (67%)
Query: 7 KSALLGSPAASGHTGDVMSLSLA-PDMRTFVSGACDASAKLWDIRDGS-CKQTFPGHESD 64
K+++ G SGHT DV+S+S++ + F+SG+CD++A+LWD R S +TF GHE D
Sbjct: 191 KTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGD 250
Query: 65 INAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS-HDNIICG-ITSVAFSRSGRLLL 122
+N V FFP+G+ F TGSDD TCRL+DIR +L +Y H + G +TS+AFS SGRLL
Sbjct: 251 VNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLF 310
Query: 123 AGYDDFN-CNVWDSMKTERA---GILA-GHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
AGY N C VWD++ E G+ H NR+SCLG++ DG A+ TGSWDS L+IW
Sbjct: 311 AGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIW 368
Score = 125 (49.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 39/167 (23%), Positives = 74/167 (44%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDI-----RDGSC--KQTFPGHESDINAVTFFPNGW 75
VM+ + +P+ ++ G D+ ++ + +DG+ + GH ++ + PN
Sbjct: 110 VMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNED 169
Query: 76 A-FATGSDDATCRLFDIRADQELAMYSHD---NIICGITSVAFSRSG-RLLLAGYDDFNC 130
A T S D TC L+D+ + +++ + + SV+ S S ++G D
Sbjct: 170 AHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTA 229
Query: 131 NVWDSMKTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+WD+ RA GH+ V+ + DG TGS D R+++
Sbjct: 230 RLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYD 276
Score = 108 (43.1 bits), Expect = 0.00053, P = 0.00053
Identities = 41/172 (23%), Positives = 68/172 (39%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG V SL P+ VS + D +W+ + + F PNG +
Sbjct: 63 GHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSV 122
Query: 78 ATGSDDATCRLFDIR--ADQELAMYSHDNIICG----ITSVAF-SRSGRLLLAGYDDFNC 130
A G D+ C +F + AD++ ++ G ++ + L+ D C
Sbjct: 123 ACGGLDSVCSIFSLSSTADKD-GTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTC 181
Query: 131 NVWD---SMKTERAG--ILAGHDNRVSCLGVTEDGMA-VATGSWDSFLRIWN 176
+WD +KT G +GH V + ++ +GS DS R+W+
Sbjct: 182 ILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWD 233
>FB|FBgn0004623 [details] [associations]
symbol:Gbeta76C "G protein beta-subunit 76C" species:7227
"Drosophila melanogaster" [GO:0016059 "deactivation of rhodopsin
mediated signaling" evidence=IMP;TAS] [GO:0016056 "rhodopsin
mediated signaling pathway" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=NAS;IMP] [GO:0007602 "phototransduction"
evidence=IDA;IMP] [GO:0016028 "rhabdomere" evidence=IDA;TAS]
[GO:0005834 "heterotrimeric G-protein complex"
evidence=NAS;IDA;IPI] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=NAS] [GO:0007202 "activation of
phospholipase C activity" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005737 EMBL:AE014296 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007601
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0007202 GO:GO:0016028 GO:GO:0016056
PRINTS:PR00319 GO:GO:0016059 GO:GO:0005834
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K07972 EMBL:M76593 EMBL:AY118886 PIR:JU0269 RefSeq:NP_523720.2
UniGene:Dm.9760 ProteinModelPortal:P29829 SMR:P29829 IntAct:P29829
MINT:MINT-938155 STRING:P29829 PaxDb:P29829
EnsemblMetazoa:FBtr0074949 GeneID:40148 KEGG:dme:Dmel_CG8770
CTD:40148 FlyBase:FBgn0004623 InParanoid:P29829 OMA:KGHINKV
OrthoDB:EOG4SJ3W9 PhylomeDB:P29829 ChiTaRS:Gbeta76C
GenomeRNAi:40148 NextBio:817248 Bgee:P29829 GermOnline:CG8770
Uniprot:P29829
Length = 346
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 71/159 (44%), Positives = 111/159 (69%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH GD+ LSL+PDM+T+++G+ D +AKLWD+R+ KQ F GH+ D+++V + P+G+
Sbjct: 187 NGHAGDIAGLSLSPDMKTYITGSVDKTAKLWDVREEGHKQMFFGHDMDVSSVCYHPSGFG 246
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
FA+ S+D T R++D+RADQ++A Y G TS A S SGR L+ G + N + WD+M
Sbjct: 247 FASCSEDQTARMYDLRADQQIAQYEPPQKNTGFTSCALSTSGRYLMCGGIEGNVHSWDTM 306
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
K G L+GH+NR++C+ + +GM +A+ SWD +R+W
Sbjct: 307 KQRHTGTLSGHENRITCISLCPNGMCLASTSWDQQVRLW 345
Score = 143 (55.4 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 42/163 (25%), Positives = 67/163 (41%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V S+ A D R V+G+ D +WD + Q P + + V F P+G
Sbjct: 57 GHINKVNSVHFAGDSRHCVTGSLDGKLIIWDTWTANKVQIIPLRSAWVMTVAFSPSGNFV 116
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICG----ITSVAFSRSGRLLLAGYDDFNCNVW 133
A G D C ++D+ + + G ++S F G L+ D C+ W
Sbjct: 117 ACGGMDNQCTVYDVNNRDASGVAKMVKELMGYEGFLSSCRFLDDGHLITGSGDMKICH-W 175
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D K + GH ++ L ++ D TGS D ++W+
Sbjct: 176 DLEKGVKTMDFNGHAGDIAGLSLSPDMKTYITGSVDKTAKLWD 218
Score = 117 (46.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 32/118 (27%), Positives = 54/118 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
G+ G + S D ++G+ D WD+ G F GH DI ++ P+ +
Sbjct: 147 GYEGFLSSCRFLDDGH-LITGSGDMKICHWDLEKGVKTMDFNGHAGDIAGLSLSPDMKTY 205
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
TGS D T +L+D+R + M+ HD ++SV + SG + +D ++D
Sbjct: 206 ITGSVDKTAKLWDVREEGHKQMFFGHD---MDVSSVCYHPSGFGFASCSEDQTARMYD 260
>POMBASE|SPBC32H8.07 [details] [associations]
symbol:git5 "heterotrimeric G protein beta subunit Git5"
species:4896 "Schizosaccharomyces pombe" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=TAS] [GO:0007190
"activation of adenylate cyclase activity" evidence=TAS]
[GO:0010619 "adenylate cyclase-activating glucose-activated
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0010972 "negative regulation of G2/M transition of mitotic cell
cycle" evidence=IMP] [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0030159 "receptor signaling complex scaffold
activity" evidence=IDA] [GO:0031138 "negative regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032092
"positive regulation of protein binding" evidence=IDA] [GO:0045014
"negative regulation of transcription by glucose" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 PomBase:SPBC32H8.07 GO:GO:0005829 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0032092 GO:GO:0019933 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007190
GenomeReviews:CU329671_GR GO:GO:0030435 GO:GO:0004871 GO:GO:0030159
EMBL:AB004535 GO:GO:0045014 PRINTS:PR00319 GO:GO:0010972
GO:GO:0005834 HOGENOM:HOG000176356 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 KO:K07972 EMBL:L28061 EMBL:AF092102 PIR:S72457
PIR:T50474 RefSeq:NP_595613.1 ProteinModelPortal:Q10282
STRING:Q10282 EnsemblFungi:SPBC32H8.07.1 GeneID:2539974
KEGG:spo:SPBC32H8.07 OrthoDB:EOG454D7D NextBio:20801117
GO:GO:0010619 GO:GO:0031138 Uniprot:Q10282
Length = 305
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 75/160 (46%), Positives = 101/160 (63%)
Query: 18 GHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GH D++SL P + FV+G CD AKLWD+R C TFPG+ SDIN+++FFP+
Sbjct: 145 GHEMDIVSLDFLPSNPNLFVTGGCDKLAKLWDLRAAYCCATFPGNTSDINSISFFPSNAD 204
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
F TG++D R FDIRA E+ YS + I SV FS+SG+LL D C VWDS+
Sbjct: 205 FVTGAEDGIARCFDIRASAEIFQYSSPSS-SPINSVLFSKSGKLLFIAKDK-TCEVWDSI 262
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ L GH+NR+S L +T DG +ATGSWD +R+W+
Sbjct: 263 SSKTITSLTGHENRISSLALTSDGTMLATGSWDECVRLWS 302
Score = 124 (48.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 37/120 (30%), Positives = 58/120 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIR-DGSCKQTFPGHESDINAVTFFPNGWA 76
G+T D+ S+S P FV+GA D A+ +DIR Q S IN+V F +G
Sbjct: 188 GNTSDINSISFFPSNADFVTGAEDGIARCFDIRASAEIFQYSSPSSSPINSVLFSKSGKL 247
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
D TC ++D + + + ++ H+N I+S+A + G +L G D +W S
Sbjct: 248 LFIAKDK-TCEVWDSISSKTITSLTGHEN---RISSLALTSDGTMLATGSWDECVRLWSS 303
Score = 118 (46.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 33/111 (29%), Positives = 48/111 (43%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP-NGWA 76
GH G V D ++G+ D + WDI GHE DI ++ F P N
Sbjct: 104 GHAGFVSCCKYVDDGH-LLTGSGDKTCMFWDIEQAKAISVLKGHEMDIVSLDFLPSNPNL 162
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD 127
F TG D +L+D+RA A + + I S++F S + G +D
Sbjct: 163 FVTGGCDKLAKLWDLRAAYCCATFPGNT--SDINSISFFPSNADFVTGAED 211
>CGD|CAL0002035 [details] [associations]
symbol:STE4 species:5476 "Candida albicans" [GO:0000750
"pheromone-dependent signal transduction involved in conjugation
with cellular fusion" evidence=IMP] [GO:0000753 "cell morphogenesis
involved in conjugation with cellular fusion" evidence=IMP]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IEA]
[GO:0005937 "mating projection" evidence=IEA] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IEA] [GO:0010525
"regulation of transposition, RNA-mediated" evidence=IEA]
[GO:0031684 "heterotrimeric G-protein complex cycle" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0002035 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000750 GO:GO:0000753
PRINTS:PR00319 EMBL:AACQ01000019 KO:K07972 RefSeq:XP_720923.1
ProteinModelPortal:Q5AHJ7 STRING:Q5AHJ7 GeneID:3637358
KEGG:cal:CaO19.799 Uniprot:Q5AHJ7
Length = 457
Score = 214 (80.4 bits), Expect = 3.1e-33, Sum P(2) = 3.1e-33
Identities = 45/87 (51%), Positives = 57/87 (65%)
Query: 19 HTGDVMSLSLAPD----MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
H+GDV+ LS P FVSG+ D SAK+WD+R + Q+F SD+N+V FP+G
Sbjct: 231 HSGDVLCLSTFPQNILSANLFVSGSSDGSAKIWDLRSPTPTQSFGISNSDVNSVKVFPDG 290
Query: 75 WAFATGSDDATCRLFDIRADQELAMYS 101
AFATGSDD + RLFD+R D EL YS
Sbjct: 291 NAFATGSDDGSIRLFDLRCDCELGHYS 317
Score = 177 (67.4 bits), Expect = 3.1e-33, Sum P(2) = 3.1e-33
Identities = 29/70 (41%), Positives = 51/70 (72%)
Query: 108 GITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG-HDNRVSCLGVTEDGMAVATG 166
G+ S+ F +SGR L + Y ++ C VWD++K+E GI+ H N+++ + V+ DG+A+ATG
Sbjct: 387 GVFSLDFGKSGRFLYSCYSEYGCVVWDTLKSEIVGIIGSEHLNKINQVSVSPDGVALATG 446
Query: 167 SWDSFLRIWN 176
SWD+ +++W+
Sbjct: 447 SWDATIKVWS 456
Score = 121 (47.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 40/165 (24%), Positives = 72/165 (43%)
Query: 15 AASGHTGDVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN 73
A++G + + PD F V+ + + ++ S + F GH + I+ F N
Sbjct: 143 ASAGLDNNCTIYKIKPDTSNFPVTEERNGTYQMQGNFYQSIQSIFKGHTAYISECEFIGN 202
Query: 74 GWAFATGSDDATCRLFDI-RADQELAMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCN 131
+ T S D TC L+D+ + + H +++C T S L ++G D +
Sbjct: 203 N-SIVTASGDMTCALWDLTKGTKSRDFVEHSGDVLCLSTFPQNILSANLFVSGSSDGSAK 261
Query: 132 VWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+WD ++ V+ + V DG A ATGS D +R+++
Sbjct: 262 IWDLRSPTPTQSFGISNSDVNSVKVFPDGNAFATGSDDGSIRLFD 306
Score = 67 (28.6 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 17/77 (22%), Positives = 30/77 (38%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + L + D +S + D +WD G K + + ++ PN
Sbjct: 83 GHQNKIAKLCWSSDSSKILSASQDGFMIIWDAVTGFKKHAIQLNNPWVLTCSYSPNEKLV 142
Query: 78 ATGSDDATCRLFDIRAD 94
A+ D C ++ I+ D
Sbjct: 143 ASAGLDNNCTIYKIKPD 159
>UNIPROTKB|Q5AHJ7 [details] [associations]
symbol:STE4 "Potential pheromone response pathway G protein
subunit" species:237561 "Candida albicans SC5314" [GO:0000750
"pheromone-dependent signal transduction involved in conjugation
with cellular fusion" evidence=IMP] [GO:0000753 "cell morphogenesis
involved in conjugation with cellular fusion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0002035 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000750 GO:GO:0000753
PRINTS:PR00319 EMBL:AACQ01000019 KO:K07972 RefSeq:XP_720923.1
ProteinModelPortal:Q5AHJ7 STRING:Q5AHJ7 GeneID:3637358
KEGG:cal:CaO19.799 Uniprot:Q5AHJ7
Length = 457
Score = 214 (80.4 bits), Expect = 3.1e-33, Sum P(2) = 3.1e-33
Identities = 45/87 (51%), Positives = 57/87 (65%)
Query: 19 HTGDVMSLSLAPD----MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
H+GDV+ LS P FVSG+ D SAK+WD+R + Q+F SD+N+V FP+G
Sbjct: 231 HSGDVLCLSTFPQNILSANLFVSGSSDGSAKIWDLRSPTPTQSFGISNSDVNSVKVFPDG 290
Query: 75 WAFATGSDDATCRLFDIRADQELAMYS 101
AFATGSDD + RLFD+R D EL YS
Sbjct: 291 NAFATGSDDGSIRLFDLRCDCELGHYS 317
Score = 177 (67.4 bits), Expect = 3.1e-33, Sum P(2) = 3.1e-33
Identities = 29/70 (41%), Positives = 51/70 (72%)
Query: 108 GITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG-HDNRVSCLGVTEDGMAVATG 166
G+ S+ F +SGR L + Y ++ C VWD++K+E GI+ H N+++ + V+ DG+A+ATG
Sbjct: 387 GVFSLDFGKSGRFLYSCYSEYGCVVWDTLKSEIVGIIGSEHLNKINQVSVSPDGVALATG 446
Query: 167 SWDSFLRIWN 176
SWD+ +++W+
Sbjct: 447 SWDATIKVWS 456
Score = 121 (47.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 40/165 (24%), Positives = 72/165 (43%)
Query: 15 AASGHTGDVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN 73
A++G + + PD F V+ + + ++ S + F GH + I+ F N
Sbjct: 143 ASAGLDNNCTIYKIKPDTSNFPVTEERNGTYQMQGNFYQSIQSIFKGHTAYISECEFIGN 202
Query: 74 GWAFATGSDDATCRLFDI-RADQELAMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCN 131
+ T S D TC L+D+ + + H +++C T S L ++G D +
Sbjct: 203 N-SIVTASGDMTCALWDLTKGTKSRDFVEHSGDVLCLSTFPQNILSANLFVSGSSDGSAK 261
Query: 132 VWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+WD ++ V+ + V DG A ATGS D +R+++
Sbjct: 262 IWDLRSPTPTQSFGISNSDVNSVKVFPDGNAFATGSDDGSIRLFD 306
Score = 67 (28.6 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 17/77 (22%), Positives = 30/77 (38%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + L + D +S + D +WD G K + + ++ PN
Sbjct: 83 GHQNKIAKLCWSSDSSKILSASQDGFMIIWDAVTGFKKHAIQLNNPWVLTCSYSPNEKLV 142
Query: 78 ATGSDDATCRLFDIRAD 94
A+ D C ++ I+ D
Sbjct: 143 ASAGLDNNCTIYKIKPD 159
>UNIPROTKB|C9JXA5 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 HOGENOM:HOG000176356 HGNC:HGNC:4398
IPI:IPI00790302 ProteinModelPortal:C9JXA5 SMR:C9JXA5 STRING:C9JXA5
PRIDE:C9JXA5 Ensembl:ENST00000451587 ArrayExpress:C9JXA5
Bgee:C9JXA5 Uniprot:C9JXA5
Length = 251
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 59/71 (83%), Positives = 64/71 (90%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH+GDVMSLSLAPD RTFVSGACDAS KLWD+RD C+QTF GHESDINAV FFPNG+A
Sbjct: 181 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA 240
Query: 77 FATGSDDATCR 87
F TGSDDATCR
Sbjct: 241 FTTGSDDATCR 251
Score = 148 (57.2 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 35/114 (30%), Positives = 53/114 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG + D + S D + LWDI G F GH D+ +++ P+G F
Sbjct: 141 GHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTF 199
Query: 78 ATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNC 130
+G+ DA+ +L+D+R H++ I +VAF +G G DD C
Sbjct: 200 VSGACDASIKLWDVRDSMCRQTFIGHES---DINAVAFFPNGYAFTTGSDDATC 250
Score = 139 (54.0 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 38/156 (24%), Positives = 70/156 (44%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDI--RDGSCK--QTFPGHESDINAVTFFPNGWAFA 78
VM+ + AP G D ++ + R+G+ + + PGH ++ F +
Sbjct: 100 VMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QII 158
Query: 79 TGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
T S D TC L+DI Q+ ++ H + S++ + GR ++G D + +WD
Sbjct: 159 TSSGDTTCALWDIETGQQTVGFAGHSG---DVMSLSLAPDGRTFVSGACDASIKLWDVRD 215
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
+ GH++ ++ + +G A TGS D+ R
Sbjct: 216 SMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCR 251
Score = 131 (51.2 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 34/160 (21%), Positives = 62/160 (38%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ D R VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C ++ ++ + S + G S ++ D C +WD
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ AGH V L + DG +G+ D+ +++W+
Sbjct: 173 TGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 212
>SGD|S000006382 [details] [associations]
symbol:PRP4 "Splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 SGD:S000006382 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006949 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 EMBL:U25842 GO:GO:0046540
EMBL:M26597 HOGENOM:HOG000157615 KO:K12662
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:M28518 PIR:A32569
RefSeq:NP_015504.1 ProteinModelPortal:P20053 SMR:P20053
DIP:DIP-2607N IntAct:P20053 MINT:MINT-423902 STRING:P20053
PaxDb:P20053 EnsemblFungi:YPR178W GeneID:856307 KEGG:sce:YPR178W
CYGD:YPR178w OrthoDB:EOG4V1B90 NextBio:981676 Genevestigator:P20053
GermOnline:YPR178W Uniprot:P20053
Length = 465
Score = 245 (91.3 bits), Expect = 3.2e-20, P = 3.2e-20
Identities = 59/165 (35%), Positives = 86/165 (52%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V SLS D SG D+ + LWDIR GS T GH I V + PNG+
Sbjct: 305 GHDKGVFSLSFQCDGSLVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSPNGYQV 364
Query: 78 ATGSDDATCRLFDIRADQELAM---YSHDNIICGITSVAFSRS--GRLLLA-GYDDFNCN 131
ATG D ++DIR E + +H NI+ T V FS+ G+ L++ GYD+ N
Sbjct: 365 ATGGGDGIINVWDIRKRDEGQLNQILAHRNIV---TQVRFSKEDGGKKLVSCGYDNL-IN 420
Query: 132 VWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
V+ S + G LAGH +++ L ++ + + +G WD +++WN
Sbjct: 421 VYSSDTWLKMGSLAGHTDKIISLDISNNSHFLVSGGWDRSIKLWN 465
Score = 116 (45.9 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 40/165 (24%), Positives = 76/165 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + + P + S + D + +LWD GH+ + +++F +G
Sbjct: 263 GHERRISDVKYHPSGKFIGSASHDMTWRLWDASTHQELLLQEGHDKGVFSLSFQCDGSLV 322
Query: 78 ATGSDDATCRLFDIRADQE-LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G D+ L+DIR+ + + + H I +VA+S +G + G D NVWD
Sbjct: 323 CSGGMDSLSMLWDIRSGSKVMTLAGHSK---PIYTVAWSPNGYQVATGGGDGIINVWDIR 379
Query: 137 KTERAGI--LAGHDNRVSCLGVT-EDG--MAVATGSWDSFLRIWN 176
K + + + H N V+ + + EDG V+ G +D+ + +++
Sbjct: 380 KRDEGQLNQILAHRNIVTQVRFSKEDGGKKLVSCG-YDNLINVYS 423
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 244 (91.0 bits), Expect = 5.9e-20, P = 5.9e-20
Identities = 52/161 (32%), Positives = 80/161 (49%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V ++ D +G DA ++WD+R G C GH +I + F PNG+
Sbjct: 362 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI 421
Query: 78 ATGSDDATCRLFDIRADQELAMYS---HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
ATGS D TC+++D+R Q +Y+ H N++ G+ G LL G D +W
Sbjct: 422 ATGSGDNTCKVWDLR--QRRCVYTIPAHQNLVTGVKFEPIH--GNFLLTGAYDNTAKIWT 477
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
LAGH+ +V L ++ DG +AT S+D ++W
Sbjct: 478 HPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 166 (63.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 47/160 (29%), Positives = 77/160 (48%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
H +SL D+ S A D S KLW + GH + VT+ P+G
Sbjct: 281 HPKSTVSLD-QKDVN-LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLG 338
Query: 79 TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMK 137
T D + RL+D+ A +E+ ++ + + G+ +AF + G L G D F VWD ++
Sbjct: 339 TTCYDRSWRLWDLEAQEEI-LHQEGHSM-GVYDIAFHQDGSLAGTGGLDAFG-RVWD-LR 394
Query: 138 TERAGI-LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
T R + L GH + + + +G +ATGS D+ ++W+
Sbjct: 395 TGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWD 434
Score = 146 (56.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 48/163 (29%), Positives = 73/163 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGAC-DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GHT V ++ P R F+ C D S +LWD+ GH + + F +G
Sbjct: 320 GHTVRVARVTWHPSGR-FLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSL 378
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
TG DA R++D+R + + + H I GI FS +G + G D C VWD
Sbjct: 379 AGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIN---FSPNGYHIATGSGDNTCKVWDL 435
Query: 136 MKTERAGILAGHDNRVSCLGVTED---GMAVATGSWDSFLRIW 175
+ + H N V+ GV + G + TG++D+ +IW
Sbjct: 436 RQRRCVYTIPAHQNLVT--GVKFEPIHGNFLLTGAYDNTAKIW 476
Score = 132 (51.5 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 36/156 (23%), Positives = 65/156 (41%)
Query: 29 APDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA--------FATG 80
+P+ + + KLW + D + T GH +++ A+ F P A+
Sbjct: 239 SPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASC 298
Query: 81 SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER 140
+ D + +L+ + +D+ +A + + V + SGR L D + +WD E
Sbjct: 299 AADGSVKLWSLDSDEPVADIEGHTV--RVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEE 356
Query: 141 AGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
GH V + +DG TG D+F R+W+
Sbjct: 357 ILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWD 392
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 244 (91.0 bits), Expect = 5.9e-20, P = 5.9e-20
Identities = 52/161 (32%), Positives = 80/161 (49%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V ++ D +G DA ++WD+R G C GH +I + F PNG+
Sbjct: 363 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI 422
Query: 78 ATGSDDATCRLFDIRADQELAMYS---HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
ATGS D TC+++D+R Q +Y+ H N++ G+ G LL G D +W
Sbjct: 423 ATGSGDNTCKVWDLR--QRRCVYTIPAHQNLVTGVKFEPIH--GNFLLTGAYDNTAKIWT 478
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
LAGH+ +V L ++ DG +AT S+D ++W
Sbjct: 479 HPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 519
Score = 167 (63.8 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 45/154 (29%), Positives = 75/154 (48%)
Query: 25 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA 84
++SL P S A D S KLW + GH + V + P+G T D
Sbjct: 286 TVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDR 345
Query: 85 TCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMKTERAGI 143
+ RL+D+ A +E+ ++ + + G+ +AF + G L G D F VWD ++T R +
Sbjct: 346 SWRLWDLEAQEEI-LHQEGHSM-GVYDIAFHQDGSLAGTGGLDAFG-RVWD-LRTGRCIM 401
Query: 144 -LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH + + + +G +ATGS D+ ++W+
Sbjct: 402 FLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWD 435
Score = 144 (55.7 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 48/163 (29%), Positives = 72/163 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGAC-DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GHT V + P R F+ C D S +LWD+ GH + + F +G
Sbjct: 321 GHTVRVARVMWHPSGR-FLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSL 379
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
TG DA R++D+R + + + H I GI FS +G + G D C VWD
Sbjct: 380 AGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIN---FSPNGYHIATGSGDNTCKVWDL 436
Query: 136 MKTERAGILAGHDNRVSCLGVTED---GMAVATGSWDSFLRIW 175
+ + H N V+ GV + G + TG++D+ +IW
Sbjct: 437 RQRRCVYTIPAHQNLVT--GVKFEPIHGNFLLTGAYDNTAKIW 477
Score = 131 (51.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 36/156 (23%), Positives = 65/156 (41%)
Query: 29 APDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA--------FATG 80
+P+ + + KLW + D + T GH +++ A+ F P A+
Sbjct: 240 SPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASC 299
Query: 81 SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER 140
+ D + +L+ + +D+ +A + + V + SGR L D + +WD E
Sbjct: 300 AADGSVKLWSLDSDEPVADIEGHTV--RVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEE 357
Query: 141 AGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
GH V + +DG TG D+F R+W+
Sbjct: 358 ILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWD 393
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 244 (91.0 bits), Expect = 6.3e-20, P = 6.3e-20
Identities = 52/161 (32%), Positives = 80/161 (49%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V ++ D +G DA ++WD+R G C GH +I + F PNG+
Sbjct: 378 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI 437
Query: 78 ATGSDDATCRLFDIRADQELAMYS---HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
ATGS D TC+++D+R Q +Y+ H N++ G+ G LL G D +W
Sbjct: 438 ATGSGDNTCKVWDLR--QRRCVYTIPAHQNLVTGVKFEPIH--GNFLLTGAYDNTAKIWT 493
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
LAGH+ +V L ++ DG +AT S+D ++W
Sbjct: 494 HPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 534
Score = 160 (61.4 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
H +SL D+ S A D S KLW + GH + V + P+G
Sbjct: 297 HPKSTVSLD-QKDVN-LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLG 354
Query: 79 TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMK 137
T D + RL+D+ A +E+ ++ + + G+ +AF + G L G D F VWD ++
Sbjct: 355 TTCYDRSWRLWDLEAQEEI-LHQEGHSM-GVYDIAFHQDGSLAGTGGLDAFG-RVWD-LR 410
Query: 138 TERAGI-LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
T R + L GH + + + +G +ATGS D+ ++W+
Sbjct: 411 TGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWD 450
Score = 144 (55.7 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 48/163 (29%), Positives = 72/163 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGAC-DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GHT V + P R F+ C D S +LWD+ GH + + F +G
Sbjct: 336 GHTVRVARVMWHPSGR-FLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSL 394
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
TG DA R++D+R + + + H I GI FS +G + G D C VWD
Sbjct: 395 AGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIN---FSPNGYHIATGSGDNTCKVWDL 451
Query: 136 MKTERAGILAGHDNRVSCLGVTED---GMAVATGSWDSFLRIW 175
+ + H N V+ GV + G + TG++D+ +IW
Sbjct: 452 RQRRCVYTIPAHQNLVT--GVKFEPIHGNFLLTGAYDNTAKIW 492
Score = 131 (51.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 36/156 (23%), Positives = 65/156 (41%)
Query: 29 APDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA--------FATG 80
+P+ + + KLW + D + T GH +++ A+ F P A+
Sbjct: 255 SPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASC 314
Query: 81 SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER 140
+ D + +L+ + +D+ +A + + V + SGR L D + +WD E
Sbjct: 315 AADGSVKLWSLDSDEPVADIEGHTV--RVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEE 372
Query: 141 AGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
GH V + +DG TG D+F R+W+
Sbjct: 373 ILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWD 408
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 244 (91.0 bits), Expect = 6.4e-20, P = 6.4e-20
Identities = 52/161 (32%), Positives = 80/161 (49%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V ++ D +G DA ++WD+R G C GH +I + F PNG+
Sbjct: 380 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI 439
Query: 78 ATGSDDATCRLFDIRADQELAMYS---HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
ATGS D TC+++D+R Q +Y+ H N++ G+ G LL G D +W
Sbjct: 440 ATGSGDNTCKVWDLR--QRRCVYTIPAHQNLVTGVKFEPIH--GNFLLTGAYDNTAKIWT 495
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
LAGH+ +V L ++ DG +AT S+D ++W
Sbjct: 496 HPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 536
Score = 160 (61.4 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
H +SL D+ S A D S KLW + GH + V + P+G
Sbjct: 299 HPKSTVSLD-QKDVN-LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLG 356
Query: 79 TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMK 137
T D + RL+D+ A +E+ ++ + + G+ +AF + G L G D F VWD ++
Sbjct: 357 TTCYDRSWRLWDLEAQEEI-LHQEGHSM-GVYDIAFHQDGSLAGTGGLDAFG-RVWD-LR 412
Query: 138 TERAGI-LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
T R + L GH + + + +G +ATGS D+ ++W+
Sbjct: 413 TGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWD 452
Score = 144 (55.7 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 48/163 (29%), Positives = 72/163 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGAC-DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GHT V + P R F+ C D S +LWD+ GH + + F +G
Sbjct: 338 GHTVRVARVMWHPSGR-FLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSL 396
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
TG DA R++D+R + + + H I GI FS +G + G D C VWD
Sbjct: 397 AGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIN---FSPNGYHIATGSGDNTCKVWDL 453
Query: 136 MKTERAGILAGHDNRVSCLGVTED---GMAVATGSWDSFLRIW 175
+ + H N V+ GV + G + TG++D+ +IW
Sbjct: 454 RQRRCVYTIPAHQNLVT--GVKFEPIHGNFLLTGAYDNTAKIW 494
Score = 131 (51.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 36/156 (23%), Positives = 65/156 (41%)
Query: 29 APDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA--------FATG 80
+P+ + + KLW + D + T GH +++ A+ F P A+
Sbjct: 257 SPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASC 316
Query: 81 SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER 140
+ D + +L+ + +D+ +A + + V + SGR L D + +WD E
Sbjct: 317 AADGSVKLWSLDSDEPVADIEGHTV--RVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEE 374
Query: 141 AGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
GH V + +DG TG D+F R+W+
Sbjct: 375 ILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWD 410
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 243 (90.6 bits), Expect = 7.0e-20, P = 7.0e-20
Identities = 54/162 (33%), Positives = 83/162 (51%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V L PD +G D+ A++WD+R G C GH +I ++ F PNG+
Sbjct: 348 GHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHV 407
Query: 78 ATGSDDATCRLFDIRADQELAMYS---HDNIICGITSVAFS-RSGRLLLAGYDDFNCNVW 133
ATGS D C+++D+R Q +Y+ H N++ +SV F G LL G D +W
Sbjct: 408 ATGSGDNACKVWDLR--QRRCIYTIPAHQNLV---SSVKFQPNDGHYLLTGAYDNTAKIW 462
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
LAGH+ +V + ++ DG +AT S+D ++W
Sbjct: 463 THPGWSPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKLW 504
Score = 160 (61.4 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 47/160 (29%), Positives = 75/160 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGAC-DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GH+ V ++ P R F+ C D S +LWD+ GH ++ + F P+G
Sbjct: 306 GHSMRVARVTWHPSGR-FLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSL 364
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
TG D+ R++D+R + M+ +I I S+ FS +G + G D C VWD
Sbjct: 365 AGTGGLDSFARVWDLRTGR-CVMFLEGHIK-EIYSINFSPNGFHVATGSGDNACKVWDLR 422
Query: 137 KTERAGILAGHDNRVSCLGVT-EDGMAVATGSWDSFLRIW 175
+ + H N VS + DG + TG++D+ +IW
Sbjct: 423 QRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIW 462
Score = 159 (61.0 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 46/155 (29%), Positives = 69/155 (44%)
Query: 25 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA 84
+L+L S A D S KLW + GH + VT+ P+G T D
Sbjct: 271 TLTLEESDVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDH 330
Query: 85 TCRLFDIRADQE-LAMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMKTERAG 142
+ RL+D+ +E L H G+ + F G L G D F VWD ++T R
Sbjct: 331 SWRLWDLEVQEEILHQEGHSK---GVHDLHFHPDGSLAGTGGLDSF-ARVWD-LRTGRCV 385
Query: 143 I-LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L GH + + + +G VATGS D+ ++W+
Sbjct: 386 MFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWD 420
Score = 147 (56.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 41/157 (26%), Positives = 69/157 (43%)
Query: 29 APDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD------ 82
+P+ + V+ + KLW + D + +T GH +++ A++F P SD
Sbjct: 225 SPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMASC 284
Query: 83 --DATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTE 139
D + +L+ + +D+ +A + H + +T + SGR L D + +WD E
Sbjct: 285 AADGSVKLWSLDSDEPIADIEGHSMRVARVT---WHPSGRFLGTTCYDHSWRLWDLEVQE 341
Query: 140 RAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
GH V L DG TG DSF R+W+
Sbjct: 342 EILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWD 378
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 243 (90.6 bits), Expect = 7.5e-20, P = 7.5e-20
Identities = 52/161 (32%), Positives = 81/161 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V ++ D +G DA ++WD+R G C GH +I ++F PNG+
Sbjct: 362 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHI 421
Query: 78 ATGSDDATCRLFDIRADQELAMYS---HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
ATGS D TC+++D+R Q +Y+ H N++ G+ G LL G D +W
Sbjct: 422 ATGSGDNTCKVWDLR--QRRCVYTIPAHQNLVTGVKFEPIH--GDFLLTGAYDNTAKIWT 477
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
LAGH+ +V L ++ DG +AT S+D ++W
Sbjct: 478 HPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 160 (61.4 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
H +SL D+ S A D S KLW + GH + V + P+G
Sbjct: 281 HPKSTVSLD-QKDVN-LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLG 338
Query: 79 TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMK 137
T D + RL+D+ A +E+ ++ + + G+ +AF + G L G D F VWD ++
Sbjct: 339 TTCYDRSWRLWDLEAQEEI-LHQEGHSM-GVYDIAFHQDGSLAGTGGLDAFG-RVWD-LR 394
Query: 138 TERAGI-LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
T R + L GH + + + +G +ATGS D+ ++W+
Sbjct: 395 TGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWD 434
Score = 144 (55.7 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 48/163 (29%), Positives = 73/163 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGAC-DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GHT V + P R F+ C D S +LWD+ GH + + F +G
Sbjct: 320 GHTVRVARVMWHPSGR-FLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSL 378
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
TG DA R++D+R + + + H I GI+ FS +G + G D C VWD
Sbjct: 379 AGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIS---FSPNGYHIATGSGDNTCKVWDL 435
Query: 136 MKTERAGILAGHDNRVSCLGVTED---GMAVATGSWDSFLRIW 175
+ + H N V+ GV + G + TG++D+ +IW
Sbjct: 436 RQRRCVYTIPAHQNLVT--GVKFEPIHGDFLLTGAYDNTAKIW 476
Score = 134 (52.2 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 37/156 (23%), Positives = 65/156 (41%)
Query: 29 APDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA--------FATG 80
+P+ + + KLW + D S T GH +++ A+ F P A+
Sbjct: 239 SPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASC 298
Query: 81 SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER 140
+ D + +L+ + +D+ +A + + V + SGR L D + +WD E
Sbjct: 299 AADGSVKLWSLDSDEPVADIEGHTV--RVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEE 356
Query: 141 AGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
GH V + +DG TG D+F R+W+
Sbjct: 357 ILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWD 392
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 242 (90.2 bits), Expect = 9.6e-20, P = 9.6e-20
Identities = 52/161 (32%), Positives = 80/161 (49%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V ++ D +G DA ++WD+R G C GH +I + F PNG+
Sbjct: 362 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI 421
Query: 78 ATGSDDATCRLFDIRADQELAMYS---HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
ATGS D TC+++D+R Q +Y+ H N++ G+ G LL G D +W
Sbjct: 422 ATGSGDNTCKVWDLR--QRRCVYTIPAHQNLVTGVKFEPIH--GDFLLTGAYDNTAKIWT 477
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
LAGH+ +V L ++ DG +AT S+D ++W
Sbjct: 478 HPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 160 (61.4 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
H +SL D+ S A D S KLW + GH + V + P+G
Sbjct: 281 HPKSTVSLD-QKDVN-LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLG 338
Query: 79 TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMK 137
T D + RL+D+ A +E+ ++ + + G+ +AF + G L G D F VWD ++
Sbjct: 339 TTCYDRSWRLWDLEAQEEI-LHQEGHSM-GVYDIAFHQDGSLAGTGGLDAFG-RVWD-LR 394
Query: 138 TERAGI-LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
T R + L GH + + + +G +ATGS D+ ++W+
Sbjct: 395 TGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWD 434
Score = 143 (55.4 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 48/163 (29%), Positives = 72/163 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGAC-DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GHT V + P R F+ C D S +LWD+ GH + + F +G
Sbjct: 320 GHTVRVARVMWHPSGR-FLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSL 378
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
TG DA R++D+R + + + H I GI FS +G + G D C VWD
Sbjct: 379 AGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIN---FSPNGYHIATGSGDNTCKVWDL 435
Query: 136 MKTERAGILAGHDNRVSCLGVTED---GMAVATGSWDSFLRIW 175
+ + H N V+ GV + G + TG++D+ +IW
Sbjct: 436 RQRRCVYTIPAHQNLVT--GVKFEPIHGDFLLTGAYDNTAKIW 476
Score = 134 (52.2 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 37/156 (23%), Positives = 65/156 (41%)
Query: 29 APDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA--------FATG 80
+P+ + + KLW + D S T GH +++ A+ F P A+
Sbjct: 239 SPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASC 298
Query: 81 SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER 140
+ D + +L+ + +D+ +A + + V + SGR L D + +WD E
Sbjct: 299 AADGSVKLWSLDSDEPVADIEGHTV--RVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEE 356
Query: 141 AGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
GH V + +DG TG D+F R+W+
Sbjct: 357 ILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWD 392
>UNIPROTKB|C9JIS1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 HOGENOM:HOG000176356 HGNC:HGNC:4398
IPI:IPI00790896 ProteinModelPortal:C9JIS1 SMR:C9JIS1 STRING:C9JIS1
PRIDE:C9JIS1 Ensembl:ENST00000431068 ArrayExpress:C9JIS1
Bgee:C9JIS1 Uniprot:C9JIS1
Length = 232
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAV 68
+GH+GDVMSLSLAPD RTFVSGACDAS KLWD+RD C+QTF GHESDINAV
Sbjct: 181 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAV 232
Score = 131 (51.2 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 34/160 (21%), Positives = 62/160 (38%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ D R VS + D +WD + P S + + P+G
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A G D C ++ ++ + S + G S ++ D C +WD
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIE 172
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ AGH V L + DG +G+ D+ +++W+
Sbjct: 173 TGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 212
Score = 124 (48.7 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG + D + S D + LWDI G F GH D+ +++ P+G F
Sbjct: 141 GHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTF 199
Query: 78 ATGSDDATCRLFDIR 92
+G+ DA+ +L+D+R
Sbjct: 200 VSGACDASIKLWDVR 214
Score = 114 (45.2 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 31/137 (22%), Positives = 61/137 (44%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDI--RDGSCK--QTFPGHESDINAVTFFPNGWAFA 78
VM+ + AP G D ++ + R+G+ + + PGH ++ F +
Sbjct: 100 VMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QII 158
Query: 79 TGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
T S D TC L+DI Q+ ++ H + S++ + GR ++G D + +WD
Sbjct: 159 TSSGDTTCALWDIETGQQTVGFAGHSG---DVMSLSLAPDGRTFVSGACDASIKLWDVRD 215
Query: 138 TERAGILAGHDNRVSCL 154
+ GH++ ++ +
Sbjct: 216 SMCRQTFIGHESDINAV 232
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 247 (92.0 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 55/159 (34%), Positives = 84/159 (52%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V S++ +PD + S + D + KLW+ G +QTF GH+ I AV F P+G
Sbjct: 958 GHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHL 1017
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+GSDD T +L+D+ A EL D+ + +VAFS + L + D +WDS
Sbjct: 1018 VSGSDDNTIKLWDL-ATSELQQSLEDHSR-SVHAVAFSPDDKQLASSSLDSTIKLWDSAT 1075
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
E L GH V + + DG +A+ S+D +++WN
Sbjct: 1076 GELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWN 1114
Score = 245 (91.3 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 55/160 (34%), Positives = 84/160 (52%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+G V SL+ +PD + SG+ D + LWD G QTF GH I +V F P+G
Sbjct: 790 GHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKEL 849
Query: 78 ATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+ SDD+T +++D+ + + + SH + SVAFS G+LL + D VW+
Sbjct: 850 ASASDDSTIKIWDLATGELQQTLDSHSQ---SVRSVAFSPDGKLLASSSLDSTIKVWNPA 906
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
E L G V + + DG +A+GS + +++WN
Sbjct: 907 TGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWN 946
Score = 234 (87.4 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 53/159 (33%), Positives = 79/159 (49%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
H G V S+ +PD + VSG+ D + K+WD G QT GH + ++ F P+G A
Sbjct: 749 HLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLA 808
Query: 79 TGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+GS D T L+D + L + H + I SVAF+ G+ L + DD +WD
Sbjct: 809 SGSYDNTIDLWDSATGELLQTFEGHPH---SIWSVAFAPDGKELASASDDSTIKIWDLAT 865
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
E L H V + + DG +A+ S DS +++WN
Sbjct: 866 GELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWN 904
Score = 217 (81.4 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 49/160 (30%), Positives = 81/160 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V S++ +PD + S + D + KLW+ G +QT G +++V F P+G
Sbjct: 1084 GHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQL 1143
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+G D+T +L+D + L + H + I SV FS G+LL +G D +WD
Sbjct: 1144 ASGYYDSTIKLWDSATGELLQTLEGHSD---RIQSVVFSPDGKLLASGSYDQTAKLWDPA 1200
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
E I GH V + + DG +A+ S+ +++W+
Sbjct: 1201 TGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWD 1240
Score = 216 (81.1 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 49/160 (30%), Positives = 80/160 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
G +G V S++ +PD + SG+ + KLW+ G QT GH + +V F P+G
Sbjct: 916 GRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQL 975
Query: 78 ATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+ S D T +L++ + + HD I +VAFS G+ L++G DD +WD
Sbjct: 976 ASSSSDTTIKLWNSTTGELQQTFKGHD---LWIRAVAFSPDGKHLVSGSDDNTIKLWDLA 1032
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+E L H V + + D +A+ S DS +++W+
Sbjct: 1033 TSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWD 1072
Score = 191 (72.3 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 52/162 (32%), Positives = 78/162 (48%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+G + V S++ +PD + SG D++ KLWD G QT GH I +V F P+G
Sbjct: 1125 TGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKL 1184
Query: 77 FATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
A+GS D T +L+D + L ++ H + SVAFS G+LL + +WD
Sbjct: 1185 LASGSYDQTAKLWDPATGELLQIFEGHSK---WVESVAFSPDGKLLASSSYGETIKLWDP 1241
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSF-LRIWN 176
+ E L D + + DG +A S D F +IW+
Sbjct: 1242 VTGELLQTLNDPDESAGSVAFSPDGNRLA--SVDIFDTKIWD 1281
Score = 184 (69.8 bits), Expect = 7.8e-13, P = 7.8e-13
Identities = 49/151 (32%), Positives = 70/151 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ + S+ +PD + SG+ D +AKLWD G Q F GH + +V F P+G
Sbjct: 1168 GHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLL 1227
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
A+ S T +L+D + L + + G SVAFS G L A D F+ +WD
Sbjct: 1228 ASSSYGETIKLWDPVTGELLQTLNDPDESAG--SVAFSPDGNRL-ASVDIFDTKIWDPAT 1284
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSW 168
E L GH V T G+++ W
Sbjct: 1285 GELLQALKGHSKWV--WSRTGAGISIFLDQW 1313
Score = 158 (60.7 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 39/122 (31%), Positives = 63/122 (51%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAF 114
+QT H + +V F P+G +GS D T +++D A EL + + D + S+AF
Sbjct: 743 QQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWD-PATGEL-LQTLDGHSGTVESLAF 800
Query: 115 SRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 174
S G+LL +G D ++WDS E GH + + + DG +A+ S DS ++I
Sbjct: 801 SPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKI 860
Query: 175 WN 176
W+
Sbjct: 861 WD 862
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 240 (89.5 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 54/162 (33%), Positives = 82/162 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V ++ D +G DA ++WD+R G C GH +I + F PNG+
Sbjct: 362 GHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHV 421
Query: 78 ATGSDDATCRLFDIRADQELAMYS---HDNIICGITSVAFSRS-GRLLLAGYDDFNCNVW 133
ATGS D TC+++D+R Q +Y+ H N++ G V F + G LL G D +W
Sbjct: 422 ATGSGDNTCKVWDLR--QRKCIYTIPAHQNLVTG---VKFEPNHGNFLLTGAYDNTAKIW 476
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
LAGH+ +V L ++ DG +AT S+D ++W
Sbjct: 477 THPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLW 518
Score = 162 (62.1 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 46/143 (32%), Positives = 66/143 (46%)
Query: 37 SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE 96
S A D S KLW + GH + V + P+G T D + RL+D+ A +E
Sbjct: 297 SCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEE 356
Query: 97 -LAMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMKTERAGI-LAGHDNRVSC 153
L H G+ +AF G L G D F VWD ++T R + L GH +
Sbjct: 357 ILHQEGHSK---GVYDIAFHTDGSLAGTGGLDAFG-RVWD-LRTGRCIMFLEGHLKEIYG 411
Query: 154 LGVTEDGMAVATGSWDSFLRIWN 176
L + +G VATGS D+ ++W+
Sbjct: 412 LNFSPNGYHVATGSGDNTCKVWD 434
Score = 138 (53.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 44/161 (27%), Positives = 72/161 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGAC-DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GH+ V + P R F+ C D S +LWD+ GH + + F +G
Sbjct: 320 GHSMRVARVMWHPSGR-FLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSL 378
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
TG DA R++D+R + + + H I G+ FS +G + G D C VWD
Sbjct: 379 AGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLN---FSPNGYHVATGSGDNTCKVWDL 435
Query: 136 MKTERAGILAGHDNRVSCLGVTED-GMAVATGSWDSFLRIW 175
+ + + H N V+ + + G + TG++D+ +IW
Sbjct: 436 RQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIW 476
Score = 135 (52.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 40/167 (23%), Positives = 69/167 (41%)
Query: 21 GDVMSLS---LAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA- 76
GD LS +P+ + + KLW + D + T GH +++ A+ F P
Sbjct: 228 GDDRPLSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVFHPKATVS 287
Query: 77 -------FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFN 129
A+ + D + +L+ + +D+ +A ++ + V + SGR L D +
Sbjct: 288 LDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSM--RVARVMWHPSGRFLGTTCYDHS 345
Query: 130 CNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+WD E GH V + DG TG D+F R+W+
Sbjct: 346 WRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWD 392
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 235 (87.8 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 51/161 (31%), Positives = 81/161 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V LS D V+G DA ++WD+R G C GH + V F PNG+
Sbjct: 393 GHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHI 452
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDS 135
ATGS D TC+++D+R Q + + +H N+I + V + + G L+ D +W +
Sbjct: 453 ATGSQDNTCKIWDLRRRQPVYTIPAHTNLI---SDVKYQQECGSFLVTCSYDSTTKIWSN 509
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L GHDN+V + + + +AT S+D ++W+
Sbjct: 510 KTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLWS 550
Score = 180 (68.4 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 50/167 (29%), Positives = 74/167 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP----- 72
G T V S + + D ++ + KLW + D KQT GH S + V P
Sbjct: 259 GDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKAD 318
Query: 73 --NGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNC 130
N A A+G D +L+ ++ +A + ++ ++ VAF SGR L D +
Sbjct: 319 EENVVAMASGGHDGAVKLWGFNNEESIADIT-GHMPHRVSKVAFHPSGRFLATACYDSSW 377
Query: 131 NVWD-SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+WD KTE GH V CL DG + TG D+F R+W+
Sbjct: 378 RLWDLEQKTEVLH-QEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWD 423
Score = 161 (61.7 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 43/163 (26%), Positives = 81/163 (49%)
Query: 17 SGHTGD-VMSLSLAPDMRTFVSGAC-DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
+GH V ++ P R F++ AC D+S +LWD+ + GH ++ +++ +G
Sbjct: 349 TGHMPHRVSKVAFHPSGR-FLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDG 407
Query: 75 WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
TG DA R++D+R + + M+ ++ + V FS +G + G D C +WD
Sbjct: 408 SVLVTGGLDAFGRVWDLRTGRCI-MFLEGHL-GAVFGVDFSPNGFHIATGSQDNTCKIWD 465
Query: 135 SMKTERAGILAGHDNRVSCLGVTED-GMAVATGSWDSFLRIWN 176
+ + + H N +S + ++ G + T S+DS +IW+
Sbjct: 466 LRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWS 508
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 179 (68.1 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 49/174 (28%), Positives = 80/174 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWD--IRDG--SCKQTFPGHESDINAVTFFP- 72
GHT V++L + D +GA D + +LW+ I D C F GH + + AV P
Sbjct: 362 GHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPL 421
Query: 73 --NGWA--FATGSDDATCRLFDIRADQELAMYSHDNIIC------GITSVAFSRSGRLLL 122
NG+ A+ S D T + F++ + + +S+ + + ++ S+ GR++
Sbjct: 422 DVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIA 481
Query: 123 AGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ D +WDS E G+L GH V +A+GS D +RIWN
Sbjct: 482 SASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWN 535
Score = 172 (65.6 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 37/122 (30%), Positives = 64/122 (52%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTF--FPNGWA 76
H V+++++ P +G + K+WDI +F GH I+A+ F N W
Sbjct: 102 HETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWV 161
Query: 77 FATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
A+G+DD+ RL+D+ + + +A++ H ++I G+T F +G LL+G D VW+
Sbjct: 162 LASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLT---FEPTGSFLLSGSRDKTVQVWNI 218
Query: 136 MK 137
K
Sbjct: 219 KK 220
Score = 159 (61.0 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 42/158 (26%), Positives = 70/158 (44%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
H DV ++ ++ D R S + D + KLWD G GH + A +F P A
Sbjct: 464 HDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLA 523
Query: 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+GS D T R++++ Q + + H I + + S+ +++ A D VW
Sbjct: 524 SGSGDRTIRIWNVDTQQCVQTLEGHTGAILKL--IYISQGTQVVSAAADGL-VKVWSLSS 580
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
E L H++RV L DG + +G D+ + +W
Sbjct: 581 GECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVW 618
Score = 127 (49.8 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 42/174 (24%), Positives = 79/174 (45%)
Query: 17 SGHTGDVMSLSLAP-DMR---TFV-SGACDASAKLWDI------RDGSCKQ--TFPGHES 63
+GHT V +++L P D+ TF+ S + D + K +++ D S + T H+
Sbjct: 407 TGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDR 466
Query: 64 DINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLL 122
D+NA+ +G A+ S D T +L+D + + + H G+ + +F+ R L
Sbjct: 467 DVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRR---GVWACSFNPFSRQLA 523
Query: 123 AGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+G D +W+ + L GH + L G V + + D +++W+
Sbjct: 524 SGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWS 577
Score = 126 (49.4 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 32/157 (20%), Positives = 68/157 (43%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD 82
V +L++ D + ++ +++I G ++ HE+ + +T P ATG
Sbjct: 64 VTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGA 123
Query: 83 DATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGR--LLLAGYDDFNCNVWDSMKTE 139
+ +++DI + H +I +++ F + +L +G DD +WD +
Sbjct: 124 EGLVKVWDIAGAYVTHSFRGHGGVI---SALCFGKHQNTWVLASGADDSRVRLWDLNSSR 180
Query: 140 RAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ GH + + L G + +GS D +++WN
Sbjct: 181 SMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWN 217
Score = 124 (48.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 18 GHTGDVMSLSLAPDMRTFV--SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW 75
GH G + +L T+V SGA D+ +LWD+ F GH S I +TF P G
Sbjct: 143 GHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGS 202
Query: 76 AFATGSDDATCRLFDIR 92
+GS D T ++++I+
Sbjct: 203 FLLSGSRDKTVQVWNIK 219
Score = 118 (46.6 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 30/123 (24%), Positives = 58/123 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V + S P R SG+ D + ++W++ C QT GH I + + G
Sbjct: 505 GHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQV 564
Query: 78 ATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ + D +++ + + + +A + +H++ + + S F G LL++G D +VW +
Sbjct: 565 VSAAADGLVKVWSLSSGECVATLDNHEDRVWALAS-RFD--GSLLVSGGADAVVSVWKDV 621
Query: 137 KTE 139
E
Sbjct: 622 TEE 624
Score = 87 (35.7 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
T+ G+L GH + V L +EDG+ +ATG+ D+ +R+WN
Sbjct: 354 TQVFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWN 392
Score = 67 (28.6 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
GH+ + L+ P +SG+ D + ++W+I+ S +T P S + A+ + NG
Sbjct: 187 GHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHS-VEAIGWV-NG 241
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 238 (88.8 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 52/159 (32%), Positives = 80/159 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V S+S +PD R S + D + K+W GS ++T GH + +V F +
Sbjct: 429 GHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLI 488
Query: 78 ATGSDDATCRLFDIRA-DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+ SDD T +++D + + SHDN + SV FS RLL + DD +WD+
Sbjct: 489 ASASDDMTVKIWDTATVPLQNNLESHDN---WVRSVVFSHDSRLLASASDDMTVKIWDTA 545
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L GHD+RV+ + + D +A+ S D ++IW
Sbjct: 546 TGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIW 584
Score = 221 (82.9 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 47/159 (29%), Positives = 78/159 (49%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
H VM++S A D R S + + K+WD R GS + GH+ +N+V+F P+ A
Sbjct: 388 HEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLA 447
Query: 79 TGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+ SDD T +++ + + H++ + SV FS RL+ + DD +WD+
Sbjct: 448 SASDDRTVKIWHAATGSLQRTLEGHND---WVRSVVFSHDSRLIASASDDMTVKIWDTAT 504
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L HDN V + + D +A+ S D ++IW+
Sbjct: 505 VPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWD 543
Score = 205 (77.2 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 46/160 (28%), Positives = 78/160 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V S+ + D R SG+ D + ++W+ G + TF HE + AV+F +
Sbjct: 345 GHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRL 404
Query: 78 ATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+ SD +++D R + + HD+ C + SV+FS RLL + DD +W +
Sbjct: 405 ASASDGGNVKIWDTRTGSLQNVLEGHDD--C-VNSVSFSPDSRLLASASDDRTVKIWHAA 461
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH++ V + + D +A+ S D ++IW+
Sbjct: 462 TGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWD 501
Score = 199 (75.1 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 42/159 (26%), Positives = 79/159 (49%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V S+ + D R S + D + K+WD G+ ++ GH + +V F +
Sbjct: 303 GHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLI 362
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
A+GS+D T R+++ L ++ ++ + +V+F+ R L + D N +WD+
Sbjct: 363 ASGSNDRTVRIWETTTG--LLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRT 420
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+L GHD+ V+ + + D +A+ S D ++IW+
Sbjct: 421 GSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWH 459
Score = 191 (72.3 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 48/170 (28%), Positives = 76/170 (44%)
Query: 8 SALLGSPAA-SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDIN 66
SALL SPA GH V S+S + D R S + D + K+WD + T GH +
Sbjct: 250 SALLFSPAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVK 309
Query: 67 AVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYD 126
+V F + A+ SDD T +++D M N + SV FS RL+ +G +
Sbjct: 310 SVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHND--SVRSVVFSHDSRLIASGSN 367
Query: 127 DFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D +W++ H++ V + D +A+ S ++IW+
Sbjct: 368 DRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWD 417
Score = 161 (61.7 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 36/116 (31%), Positives = 57/116 (49%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
H V S+ + D R S + D + K+WD GS + T GH+ +N+V+F P+ A
Sbjct: 514 HDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLA 573
Query: 79 TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+ SDD T +++ A ++ D S+AFS + LL + DD +WD
Sbjct: 574 SASDDGTVKIW--YAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWD 627
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 233 (87.1 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 51/160 (31%), Positives = 79/160 (49%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH SL+ +PD V+ + D K+WDI G C TF H S + AV F G
Sbjct: 343 GHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQVM 402
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAG-YDDFNCNVWDSM 136
+ S D T R +D+ + ++ I +A SG ++ AG D+F+ +VW
Sbjct: 403 FSSSLDGTVRAWDLIRYRNFRTFTGTERI-QFNCLAVDPSGEVVCAGSLDNFDIHVWSVQ 461
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L+GH+ VSCL +++ +A+ SWD +RIW+
Sbjct: 462 TGQLLDALSGHEGPVSCLSFSQENSVLASASWDKTIRIWS 501
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 223 (83.6 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 53/164 (32%), Positives = 80/164 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V + P VSG+ D S ++WD+R G C +T P H ++AV F +G
Sbjct: 154 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLI 213
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ S D CR++D + Q L + DN ++ V FS +G+ +LA D +WD
Sbjct: 214 VSSSYDGLCRIWDTASGQCLKTLIDDDNP--PVSFVKFSPNGKYILAATLDNTLKLWDYS 271
Query: 137 KTERAGILAGHDNRVSCL----GVTEDGMAVATGSWDSFLRIWN 176
K + GH N C+ VT G + +GS D+ + IWN
Sbjct: 272 KGKCLKTYTGHKNEKYCIFANFSVT-GGKWIVSGSEDNMVYIWN 314
Score = 190 (71.9 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 42/162 (25%), Positives = 77/162 (47%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT V ++ +P+ S + D K+W DG ++T GH+ I+ V + +
Sbjct: 69 AGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRL 128
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDN-IICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+GSDD T +++++ + L + H N + C F+ L+++G D + +WD
Sbjct: 129 LVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFC----CNFNPQSNLIVSGSFDESVRIWD 184
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L H + VS + DG + + S+D RIW+
Sbjct: 185 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 226
Score = 188 (71.2 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 43/162 (26%), Positives = 83/162 (51%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
SGH + ++ + D R VSG+ D + K+W++ G +T GH + + F P
Sbjct: 111 SGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNL 170
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+GS D + R++D+R + L + +H + +++V F+R G L+++ D C +WD+
Sbjct: 171 IVSGSFDESVRIWDVRTGKCLKTLPAHSD---PVSAVHFNRDGSLIVSSSYDGLCRIWDT 227
Query: 136 MKTERAGILAGHDNR-VSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L DN VS + + +G + + D+ L++W+
Sbjct: 228 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 269
Score = 164 (62.8 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 40/123 (32%), Positives = 59/123 (47%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVA 113
K T GH ++AV F PNG A+ S D +++ + E + H GI+ VA
Sbjct: 65 KFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK---LGISDVA 121
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
+S RLL++G DD VW+ + L GH N V C + +GS+D +R
Sbjct: 122 WSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 181
Query: 174 IWN 176
IW+
Sbjct: 182 IWD 184
Score = 140 (54.3 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 41/162 (25%), Positives = 73/162 (45%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD-INAVTFFPNGWAF 77
H+ V ++ D VS + D ++WD G C +T ++ ++ V F PNG
Sbjct: 197 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 256
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+ D T +L+D + L Y+ H N C + + + G+ +++G +D +W+
Sbjct: 257 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT-GGKWIVSGSEDNMVYIWNL 315
Query: 136 MKTERAGILAGHDNRVSCLGV--TEDGMAVATGSWDSFLRIW 175
E L GH + V C TE+ +A A D +++W
Sbjct: 316 QSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 52/164 (31%), Positives = 80/164 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V + P VSG+ D S ++WD++ G C +T P H ++AV F +G
Sbjct: 101 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 160
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ S D CR++D + Q L + DN ++ V FS +G+ +LA D +WD
Sbjct: 161 VSSSYDGLCRIWDTASGQCLKTLIDDDNP--PVSFVKFSPNGKYILAATLDNTLKLWDYS 218
Query: 137 KTERAGILAGHDNRVSCL----GVTEDGMAVATGSWDSFLRIWN 176
K + GH N C+ VT G + +GS D+ + IWN
Sbjct: 219 KGKCLKTYTGHKNEKYCIFANFSVT-GGKWIVSGSEDNLVYIWN 261
Score = 191 (72.3 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 42/162 (25%), Positives = 82/162 (50%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
SGH + ++ + D VS + D + K+WD+ G C +T GH + + F P
Sbjct: 58 SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL 117
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+GS D + R++D++ + L + +H + +++V F+R G L+++ D C +WD+
Sbjct: 118 IVSGSFDESVRIWDVKTGKCLKTLPAHSD---PVSAVHFNRDGSLIVSSSYDGLCRIWDT 174
Query: 136 MKTERAGILAGHDNR-VSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L DN VS + + +G + + D+ L++W+
Sbjct: 175 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 216
Score = 191 (72.3 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 45/163 (27%), Positives = 80/163 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT V S+ +P+ S + D K+W DG ++T GH+ I+ V + +
Sbjct: 16 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL 75
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDN-IICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+ SDD T +++D+ + + L + H N + C F+ L+++G D + +WD
Sbjct: 76 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFC----CNFNPQSNLIVSGSFDESVRIWD 131
Query: 135 SMKTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+KT + L H + VS + DG + + S+D RIW+
Sbjct: 132 -VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 173
Score = 152 (58.6 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 37/123 (30%), Positives = 57/123 (46%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVA 113
K T GH +++V F PNG A+ S D +++ + E + H GI+ VA
Sbjct: 12 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK---LGISDVA 68
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
+S LL++ DD +WD + L GH N V C + +GS+D +R
Sbjct: 69 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 128
Query: 174 IWN 176
IW+
Sbjct: 129 IWD 131
Score = 127 (49.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 40/162 (24%), Positives = 73/162 (45%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD-INAVTFFPNGWAF 77
H+ V ++ D VS + D ++WD G C +T ++ ++ V F PNG
Sbjct: 144 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 203
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+ D T +L+D + L Y+ H N C + + + G+ +++G +D +W+
Sbjct: 204 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT-GGKWIVSGSEDNLVYIWNL 262
Query: 136 MKTERAGILAGHDNRV--SCLGVTEDGMAVATGSWDSFLRIW 175
E L GH + V + TE+ +A A D +++W
Sbjct: 263 QTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 304
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 228 (85.3 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 48/160 (30%), Positives = 81/160 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V ++ D S D+ A++WD+R G F GH + +V F PNG+
Sbjct: 379 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHL 438
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFS-RSGRLLLAGYDDFNCNVWDS 135
A+G +D CR++D+R + L + +H N++ + V + + G L D N+W
Sbjct: 439 ASGGEDNQCRIWDLRMRKSLYIIPAHANLV---SQVKYEPQEGYFLATASYDMKVNIWSG 495
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
LAGH+++V+ L +T D +AT S D +++W
Sbjct: 496 RDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
Score = 179 (68.1 bits), Expect = 7.4e-13, P = 7.4e-13
Identities = 50/143 (34%), Positives = 73/143 (51%)
Query: 37 SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE 96
+ + D +AKLW DG+ QTF GH + V F P+G T S D T RL+DI E
Sbjct: 315 TASADRTAKLWKT-DGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAE 373
Query: 97 LAMYS-HDNIICGITSVAFSRSGRLLLA-GYDDFNCNVWDSMKTERAGIL-AGHDNRVSC 153
L + H + GI AF + G L + G D VWD ++T R+ ++ GH V
Sbjct: 374 LLLQEGHSRSVYGI---AFQQDGALAASCGLDSL-ARVWD-LRTGRSILVFQGHIKPVFS 428
Query: 154 LGVTEDGMAVATGSWDSFLRIWN 176
+ + +G +A+G D+ RIW+
Sbjct: 429 VNFSPNGYHLASGGEDNQCRIWD 451
Score = 164 (62.8 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 42/160 (26%), Positives = 77/160 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ P + + + D + +LWDI G+ GH + + F +G
Sbjct: 337 GHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALA 396
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
A+ D+ R++D+R + + ++ I + SV FS +G L +G +D C +WD
Sbjct: 397 ASCGLDSLARVWDLRTGRSILVFQGH--IKPVFSVNFSPNGYHLASGGEDNQCRIWDLRM 454
Query: 138 TERAGILAGHDNRVSCLGVT-EDGMAVATGSWDSFLRIWN 176
+ I+ H N VS + ++G +AT S+D + IW+
Sbjct: 455 RKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWS 494
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 220 (82.5 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 52/164 (31%), Positives = 80/164 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V + P VSG+ D S ++WD++ G C +T P H ++AV F +G
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ S D CR++D + Q L + DN ++ V FS +G+ +LA D +WD
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNP--PVSFVKFSPNGKYILAATLDNTLKLWDYS 244
Query: 137 KTERAGILAGHDNRVSCL----GVTEDGMAVATGSWDSFLRIWN 176
K + GH N C+ VT G + +GS D+ + IWN
Sbjct: 245 KGKCLKTYTGHKNEKYCIFANFSVT-GGKWIVSGSEDNLVYIWN 287
Score = 191 (72.3 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 42/162 (25%), Positives = 82/162 (50%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
SGH + ++ + D VS + D + K+WD+ G C +T GH + + F P
Sbjct: 84 SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL 143
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+GS D + R++D++ + L + +H + +++V F+R G L+++ D C +WD+
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSD---PVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 136 MKTERAGILAGHDNR-VSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L DN VS + + +G + + D+ L++W+
Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 191 (72.3 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 45/163 (27%), Positives = 80/163 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT V S+ +P+ S + D K+W DG ++T GH+ I+ V + +
Sbjct: 42 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL 101
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDN-IICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+ SDD T +++D+ + + L + H N + C F+ L+++G D + +WD
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFC----CNFNPQSNLIVSGSFDESVRIWD 157
Query: 135 SMKTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+KT + L H + VS + DG + + S+D RIW+
Sbjct: 158 -VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 152 (58.6 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 37/123 (30%), Positives = 57/123 (46%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVA 113
K T GH +++V F PNG A+ S D +++ + E + H GI+ VA
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK---LGISDVA 94
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
+S LL++ DD +WD + L GH N V C + +GS+D +R
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 174 IWN 176
IW+
Sbjct: 155 IWD 157
Score = 127 (49.8 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 40/162 (24%), Positives = 73/162 (45%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD-INAVTFFPNGWAF 77
H+ V ++ D VS + D ++WD G C +T ++ ++ V F PNG
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+ D T +L+D + L Y+ H N C + + + G+ +++G +D +W+
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT-GGKWIVSGSEDNLVYIWNL 288
Query: 136 MKTERAGILAGHDNRV--SCLGVTEDGMAVATGSWDSFLRIW 175
E L GH + V + TE+ +A A D +++W
Sbjct: 289 QTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 220 (82.5 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 52/164 (31%), Positives = 80/164 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V + P VSG+ D S ++WD++ G C +T P H ++AV F +G
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ S D CR++D + Q L + DN ++ V FS +G+ +LA D +WD
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNP--PVSFVKFSPNGKYILAATLDNTLKLWDYS 244
Query: 137 KTERAGILAGHDNRVSCL----GVTEDGMAVATGSWDSFLRIWN 176
K + GH N C+ VT G + +GS D+ + IWN
Sbjct: 245 KGKCLKTYTGHKNEKYCIFANFSVT-GGKWIVSGSEDNLVYIWN 287
Score = 191 (72.3 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 42/162 (25%), Positives = 82/162 (50%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
SGH + ++ + D VS + D + K+WD+ G C +T GH + + F P
Sbjct: 84 SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL 143
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+GS D + R++D++ + L + +H + +++V F+R G L+++ D C +WD+
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSD---PVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 136 MKTERAGILAGHDNR-VSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L DN VS + + +G + + D+ L++W+
Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 191 (72.3 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 45/163 (27%), Positives = 80/163 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT V S+ +P+ S + D K+W DG ++T GH+ I+ V + +
Sbjct: 42 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL 101
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDN-IICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+ SDD T +++D+ + + L + H N + C F+ L+++G D + +WD
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFC----CNFNPQSNLIVSGSFDESVRIWD 157
Query: 135 SMKTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+KT + L H + VS + DG + + S+D RIW+
Sbjct: 158 -VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 152 (58.6 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 37/123 (30%), Positives = 57/123 (46%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVA 113
K T GH +++V F PNG A+ S D +++ + E + H GI+ VA
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK---LGISDVA 94
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
+S LL++ DD +WD + L GH N V C + +GS+D +R
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 174 IWN 176
IW+
Sbjct: 155 IWD 157
Score = 127 (49.8 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 40/162 (24%), Positives = 73/162 (45%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD-INAVTFFPNGWAF 77
H+ V ++ D VS + D ++WD G C +T ++ ++ V F PNG
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+ D T +L+D + L Y+ H N C + + + G+ +++G +D +W+
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT-GGKWIVSGSEDNLVYIWNL 288
Query: 136 MKTERAGILAGHDNRV--SCLGVTEDGMAVATGSWDSFLRIW 175
E L GH + V + TE+ +A A D +++W
Sbjct: 289 QTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 220 (82.5 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 52/164 (31%), Positives = 80/164 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V + P VSG+ D S ++WD++ G C +T P H ++AV F +G
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ S D CR++D + Q L + DN ++ V FS +G+ +LA D +WD
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNP--PVSFVKFSPNGKYILAATLDNTLKLWDYS 244
Query: 137 KTERAGILAGHDNRVSCL----GVTEDGMAVATGSWDSFLRIWN 176
K + GH N C+ VT G + +GS D+ + IWN
Sbjct: 245 KGKCLKTYTGHKNEKYCIFANFSVT-GGKWIVSGSEDNLVYIWN 287
Score = 191 (72.3 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 42/162 (25%), Positives = 82/162 (50%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
SGH + ++ + D VS + D + K+WD+ G C +T GH + + F P
Sbjct: 84 SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL 143
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+GS D + R++D++ + L + +H + +++V F+R G L+++ D C +WD+
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSD---PVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 136 MKTERAGILAGHDNR-VSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L DN VS + + +G + + D+ L++W+
Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 191 (72.3 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 45/163 (27%), Positives = 80/163 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT V S+ +P+ S + D K+W DG ++T GH+ I+ V + +
Sbjct: 42 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL 101
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDN-IICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+ SDD T +++D+ + + L + H N + C F+ L+++G D + +WD
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFC----CNFNPQSNLIVSGSFDESVRIWD 157
Query: 135 SMKTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+KT + L H + VS + DG + + S+D RIW+
Sbjct: 158 -VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 152 (58.6 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 37/123 (30%), Positives = 57/123 (46%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVA 113
K T GH +++V F PNG A+ S D +++ + E + H GI+ VA
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK---LGISDVA 94
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
+S LL++ DD +WD + L GH N V C + +GS+D +R
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 174 IWN 176
IW+
Sbjct: 155 IWD 157
Score = 127 (49.8 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 40/162 (24%), Positives = 73/162 (45%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD-INAVTFFPNGWAF 77
H+ V ++ D VS + D ++WD G C +T ++ ++ V F PNG
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+ D T +L+D + L Y+ H N C + + + G+ +++G +D +W+
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT-GGKWIVSGSEDNLVYIWNL 288
Query: 136 MKTERAGILAGHDNRV--SCLGVTEDGMAVATGSWDSFLRIW 175
E L GH + V + TE+ +A A D +++W
Sbjct: 289 QTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 220 (82.5 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 52/164 (31%), Positives = 80/164 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V + P VSG+ D S ++WD++ G C +T P H ++AV F +G
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ S D CR++D + Q L + DN ++ V FS +G+ +LA D +WD
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNP--PVSFVKFSPNGKYILAATLDNTLKLWDYS 244
Query: 137 KTERAGILAGHDNRVSCL----GVTEDGMAVATGSWDSFLRIWN 176
K + GH N C+ VT G + +GS D+ + IWN
Sbjct: 245 KGKCLKTYTGHKNEKYCIFANFSVT-GGKWIVSGSEDNLVYIWN 287
Score = 191 (72.3 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 42/162 (25%), Positives = 82/162 (50%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
SGH + ++ + D VS + D + K+WD+ G C +T GH + + F P
Sbjct: 84 SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL 143
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+GS D + R++D++ + L + +H + +++V F+R G L+++ D C +WD+
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSD---PVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 136 MKTERAGILAGHDNR-VSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L DN VS + + +G + + D+ L++W+
Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 191 (72.3 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 45/163 (27%), Positives = 80/163 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT V S+ +P+ S + D K+W DG ++T GH+ I+ V + +
Sbjct: 42 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL 101
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDN-IICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+ SDD T +++D+ + + L + H N + C F+ L+++G D + +WD
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFC----CNFNPQSNLIVSGSFDESVRIWD 157
Query: 135 SMKTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+KT + L H + VS + DG + + S+D RIW+
Sbjct: 158 -VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 152 (58.6 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 37/123 (30%), Positives = 57/123 (46%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVA 113
K T GH +++V F PNG A+ S D +++ + E + H GI+ VA
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK---LGISDVA 94
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
+S LL++ DD +WD + L GH N V C + +GS+D +R
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 174 IWN 176
IW+
Sbjct: 155 IWD 157
Score = 127 (49.8 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 40/162 (24%), Positives = 73/162 (45%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD-INAVTFFPNGWAF 77
H+ V ++ D VS + D ++WD G C +T ++ ++ V F PNG
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+ D T +L+D + L Y+ H N C + + + G+ +++G +D +W+
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT-GGKWIVSGSEDNLVYIWNL 288
Query: 136 MKTERAGILAGHDNRV--SCLGVTEDGMAVATGSWDSFLRIW 175
E L GH + V + TE+ +A A D +++W
Sbjct: 289 QTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 220 (82.5 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 52/164 (31%), Positives = 80/164 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V + P VSG+ D S ++WD++ G C +T P H ++AV F +G
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ S D CR++D + Q L + DN ++ V FS +G+ +LA D +WD
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNP--PVSFVKFSPNGKYILAATLDNTLKLWDYS 244
Query: 137 KTERAGILAGHDNRVSCL----GVTEDGMAVATGSWDSFLRIWN 176
K + GH N C+ VT G + +GS D+ + IWN
Sbjct: 245 KGKCLKTYTGHKNEKYCIFANFSVT-GGKWIVSGSEDNLVYIWN 287
Score = 191 (72.3 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 42/162 (25%), Positives = 82/162 (50%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
SGH + ++ + D VS + D + K+WD+ G C +T GH + + F P
Sbjct: 84 SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL 143
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+GS D + R++D++ + L + +H + +++V F+R G L+++ D C +WD+
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSD---PVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 136 MKTERAGILAGHDNR-VSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L DN VS + + +G + + D+ L++W+
Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 191 (72.3 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 45/163 (27%), Positives = 80/163 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT V S+ +P+ S + D K+W DG ++T GH+ I+ V + +
Sbjct: 42 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL 101
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDN-IICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+ SDD T +++D+ + + L + H N + C F+ L+++G D + +WD
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFC----CNFNPQSNLIVSGSFDESVRIWD 157
Query: 135 SMKTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+KT + L H + VS + DG + + S+D RIW+
Sbjct: 158 -VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 152 (58.6 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 37/123 (30%), Positives = 57/123 (46%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVA 113
K T GH +++V F PNG A+ S D +++ + E + H GI+ VA
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK---LGISDVA 94
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
+S LL++ DD +WD + L GH N V C + +GS+D +R
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 174 IWN 176
IW+
Sbjct: 155 IWD 157
Score = 127 (49.8 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 40/162 (24%), Positives = 73/162 (45%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD-INAVTFFPNGWAF 77
H+ V ++ D VS + D ++WD G C +T ++ ++ V F PNG
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+ D T +L+D + L Y+ H N C + + + G+ +++G +D +W+
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT-GGKWIVSGSEDNLVYIWNL 288
Query: 136 MKTERAGILAGHDNRV--SCLGVTEDGMAVATGSWDSFLRIW 175
E L GH + V + TE+ +A A D +++W
Sbjct: 289 QTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 225 (84.3 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 50/160 (31%), Positives = 86/160 (53%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V+S++ +PD + SG+ + + KLWD K T GH + + + F P+G
Sbjct: 153 GHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLL 212
Query: 78 ATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+GS+DAT +L+D + + + H N I S+AFS +G+LL +G D +WD+
Sbjct: 213 ASGSNDATIKLWDPPSGSLKHTLEGHSN---KIESLAFSPNGQLLASGSSDATIKLWDTA 269
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH + V + + D + +GS D+ +++W+
Sbjct: 270 TGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWD 309
Score = 211 (79.3 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 50/160 (31%), Positives = 82/160 (51%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ + +++ +PD R SG+ D + KLWD G KQT GH S + +V F PNG
Sbjct: 39 GHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLL 98
Query: 78 ATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+GS D T +L++ +D + M H + + SVAFS +G+L W+
Sbjct: 99 ASGSSDTTIKLWNSASDSLKHTMEGHSD---RVESVAFSPNGQL------------WNPA 143
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ GH + V + + DG +A+GS + +++W+
Sbjct: 144 IGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWD 183
Score = 151 (58.2 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 35/106 (33%), Positives = 54/106 (50%)
Query: 56 QTFPGHESDINAVTFFPNGWAFATGSDDATCRLFD-IRADQELAMYSHDNIICGITSVAF 114
QT GH I VTF P+G A+GS+D T +L+D + + H + + SVAF
Sbjct: 35 QTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSS---SVQSVAF 91
Query: 115 SRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG 160
S +G+LL +G D +W+S + GH +RV + + +G
Sbjct: 92 SPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG 137
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 226 (84.6 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 43/159 (27%), Positives = 83/159 (52%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V ++ PD ++G D ++WD+R G C GH +I++V + PNG+
Sbjct: 336 GHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEM 395
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
TGS D + +++D+R + M +H +++ T V +G+ L++ D +W +
Sbjct: 396 ITGSSDNSMKVWDLRMRRNTYTMPAHTSVV---TRVRADAAGQYLVSASFDCTLKMWSTT 452
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ L GHD R+ C+ ++ DG + + ++D ++W
Sbjct: 453 GWQPLRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLW 491
Score = 164 (62.8 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 43/142 (30%), Positives = 68/142 (47%)
Query: 36 VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95
VS + D + LW + S H ++ V F PNG AT D+T R++D+ +
Sbjct: 270 VSCSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKK 329
Query: 96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI-LAGHDNRVSCL 154
EL +Y + + VAF G + L G D VWD M+T R + L GH + +
Sbjct: 330 EL-LYQEGHSK-SVADVAFHPDGSVALTGGHDCYGRVWD-MRTGRCIMFLDGHTKEIHSV 386
Query: 155 GVTEDGMAVATGSWDSFLRIWN 176
+G + TGS D+ +++W+
Sbjct: 387 EWMPNGYEMITGSSDNSMKVWD 408
Score = 120 (47.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 35/158 (22%), Positives = 68/158 (43%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
H V ++ P+ + D++ +++D+ GH + V F P+G
Sbjct: 295 HPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVAL 354
Query: 79 TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT 138
TG D R++D+R + + M+ D I SV + +G ++ G D + VWD
Sbjct: 355 TGGHDCYGRVWDMRTGRCI-MFL-DGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMR 412
Query: 139 ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ H + V+ + G + + S+D L++W+
Sbjct: 413 RNTYTMPAHTSVVTRVRADAAGQYLVSASFDCTLKMWS 450
>UNIPROTKB|Q15269 [details] [associations]
symbol:PWP2 "Periodic tryptophan protein 2 homolog"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471079 GO:GO:0004871
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AP001753 EMBL:AB001517
HOGENOM:HOG000160363 KO:K14558 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003 EMBL:X95263
EMBL:X96424 EMBL:X96425 EMBL:U53346 EMBL:U56085 EMBL:U56089
EMBL:U56086 EMBL:U56087 EMBL:U56088 EMBL:AK314184 EMBL:BC013309
EMBL:BC014988 EMBL:AB001523 IPI:IPI00300078 RefSeq:NP_005040.2
UniGene:Hs.449076 ProteinModelPortal:Q15269 SMR:Q15269
IntAct:Q15269 MINT:MINT-1411448 STRING:Q15269 PhosphoSite:Q15269
DMDM:116242740 SWISS-2DPAGE:Q15269 PaxDb:Q15269 PeptideAtlas:Q15269
PRIDE:Q15269 DNASU:5822 Ensembl:ENST00000291576 GeneID:5822
KEGG:hsa:5822 UCSC:uc002zeb.3 CTD:5822 GeneCards:GC21P045527
H-InvDB:HIX0213175 HGNC:HGNC:9711 HPA:HPA024573 MIM:601475
neXtProt:NX_Q15269 PharmGKB:PA162400451 HOVERGEN:HBG030681
InParanoid:Q15269 OrthoDB:EOG4R7V93 PhylomeDB:Q15269
GenomeRNAi:5822 NextBio:22681 ArrayExpress:Q15269 Bgee:Q15269
CleanEx:HS_PWP2 Genevestigator:Q15269 GermOnline:ENSG00000160220
Uniprot:Q15269
Length = 919
Score = 225 (84.3 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 52/161 (32%), Positives = 80/161 (49%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH +++L+ +PD + V+G D K+W+ G C TF H S + VTF G+
Sbjct: 371 GHFNSMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTFTEHSSGVTGVTFTATGYVV 430
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAG-YDDFNCNVWDSM 136
T S D T R FD+ + ++ + VA SG ++ AG D F VW SM
Sbjct: 431 VTSSMDGTVRAFDLHRYRNFRTFTSPRPT-QFSCVAVDASGEIVSAGAQDSFEIFVW-SM 488
Query: 137 KTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+T R +L+GH+ +S L +A+ SWD +R+W+
Sbjct: 489 QTGRLLDVLSGHEGPISGLCFNPMKSVLASASWDKTVRLWD 529
>CGD|CAL0003392 [details] [associations]
symbol:PWP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0034388 "Pwp2p-containing subcomplex of
90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030010 "establishment of cell polarity" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 225 (84.3 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 48/160 (30%), Positives = 76/160 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + +L +PD V+G+ D K+WD+R G C TF H S + V F G
Sbjct: 337 GHFDSMNTLCYSPDGSRLVTGSDDGKIKIWDVRSGFCLMTFTEHTSAVTQVQFAKRGQVL 396
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD-FNCNVWDSM 136
+ S D T R +D+ + ++ + + +A SG +++ G D F VW
Sbjct: 397 FSSSLDGTIRAWDLIRFRNFKTFTATSRV-QFNCLAVDPSGEVIVGGSQDTFEIYVWSVQ 455
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L GH+ +SCL ++ +A+ SWD +RIWN
Sbjct: 456 TGQLLDSLTGHEGPISCLTFGKENSILASASWDKTIRIWN 495
>UNIPROTKB|Q5A852 [details] [associations]
symbol:PWP2 "Putative uncharacterized protein PWP2"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 225 (84.3 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 48/160 (30%), Positives = 76/160 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + +L +PD V+G+ D K+WD+R G C TF H S + V F G
Sbjct: 337 GHFDSMNTLCYSPDGSRLVTGSDDGKIKIWDVRSGFCLMTFTEHTSAVTQVQFAKRGQVL 396
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD-FNCNVWDSM 136
+ S D T R +D+ + ++ + + +A SG +++ G D F VW
Sbjct: 397 FSSSLDGTIRAWDLIRFRNFKTFTATSRV-QFNCLAVDPSGEVIVGGSQDTFEIYVWSVQ 455
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L GH+ +SCL ++ +A+ SWD +RIWN
Sbjct: 456 TGQLLDSLTGHEGPISCLTFGKENSILASASWDKTIRIWN 495
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 218 (81.8 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 50/160 (31%), Positives = 79/160 (49%)
Query: 18 GHTGDVMSLSLA-PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GH V +++ P +G+ D + KLW + G C TF GH ++I ++F P
Sbjct: 132 GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTL 191
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
ATGS D T +L+DI+ +E+ Y+ I S++F+ SG ++ G D VWD+
Sbjct: 192 VATGSMDTTAKLWDIQNGEEV--YTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDAD 249
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ IL GH +S D + TGS D ++W+
Sbjct: 250 TGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWD 289
Score = 216 (81.1 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 53/163 (32%), Positives = 85/163 (52%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT +++ LS P +G+ D +AKLWDI++G T GH ++I +++F +G
Sbjct: 175 GHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRI 234
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICG-ITSVAFSRSGRLLLAGYDDFNCNVWDS 135
TGS D T ++D +++ + H C I+S +F+ L+L G D C +WD+
Sbjct: 235 ITGSFDHTVVVWDADTGRKVNILIGH----CAEISSASFNWDCSLILTGSMDKTCKLWDA 290
Query: 136 MKTERAGILAGHDNRV--SCLGVTEDGMAVATGSWDSFLRIWN 176
+ L GHD+ + SC T G +AT S D RI++
Sbjct: 291 TNGKCVATLTGHDDEILDSCFDYT--GKLIATASADGTARIFS 331
Score = 215 (80.7 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 49/159 (30%), Positives = 74/159 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH ++ S S D ++G+ D + KLWD +G C T GH+ +I F G
Sbjct: 259 GHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLI 318
Query: 78 ATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
AT S D T R+F + +A + H+ I+ ++F+ G LL G D +WD+
Sbjct: 319 ATASADGTARIFSAATRKCIAKLEGHEG---EISKISFNPQGNHLLTGSSDKTARIWDAQ 375
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ +L GH + + G V TGS D+ RIW
Sbjct: 376 TGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 183 (69.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 45/161 (27%), Positives = 73/161 (45%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFF-PNGWAF 77
H + +++L F++G+ D + KLWD G T GH + + A+ F P G
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKI 150
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
ATGS D TC+L+ + + + H I+C ++F+ L+ G D +WD
Sbjct: 151 ATGSFDKTCKLWSVETGKCYHTFRGHTAEIVC----LSFNPQSTLVATGSMDTTAKLWDI 206
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
E L GH + L G + TGS+D + +W+
Sbjct: 207 QNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWD 247
Score = 165 (63.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 43/160 (26%), Positives = 77/160 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ +++SLS ++G+ D + +WD G GH ++I++ +F +
Sbjct: 217 GHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLI 276
Query: 78 ATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
TGS D TC+L+D + +A + HD+ I + S F +G+L+ D ++ +
Sbjct: 277 LTGSMDKTCKLWDATNGKCVATLTGHDDEI--LDS-CFDYTGKLIATASADGTARIFSAA 333
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L GH+ +S + G + TGS D RIW+
Sbjct: 334 TRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWD 373
Score = 144 (55.7 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 31/118 (26%), Positives = 56/118 (47%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH +++ + + + D +A+++ C GHE +I+ ++F P G
Sbjct: 300 TGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNH 359
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
TGS D T R++D + Q L + H + I S AF+ G +++ G D C +W
Sbjct: 360 LLTGSSDKTARIWDAQTGQCLQVLEGHTD---EIFSCAFNYKGNIVITGSKDNTCRIW 414
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 211 (79.3 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 54/160 (33%), Positives = 77/160 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V +P FVSG D A+LW + F GH +D+ F PN
Sbjct: 563 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYI 622
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
ATGS D T RL+D+ + +++ H I S+AFS +GR L G D +WD
Sbjct: 623 ATGSADRTVRLWDVLNGNCVRIFTGHKG---PIHSLAFSPNGRFLATGATDGRVLLWDIG 679
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
G L GH + + L + DG +A+GS D+ +R+W+
Sbjct: 680 HGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWD 719
Score = 187 (70.9 bits), Expect = 8.4e-15, Sum P(2) = 8.4e-15
Identities = 39/122 (31%), Positives = 64/122 (52%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH DV P+ +G+ D + +LWD+ +G+C + F GH+ I+++ F PNG
Sbjct: 604 AGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRF 663
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
ATG+ D L+DI + + H + I + FSR G +L +G D +WD+
Sbjct: 664 LATGATDGRVLLWDIGHGLMVGELKGHTDTIYALR---FSRDGEILASGSMDNTVRLWDA 720
Query: 136 MK 137
+K
Sbjct: 721 VK 722
Score = 182 (69.1 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 40/159 (25%), Positives = 71/159 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+G V S +PD +S + D + +LW ++ +C + GH + F P G+ F
Sbjct: 521 GHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF 580
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+G D RL+ Q L +++ + +T F + + G D +WD +
Sbjct: 581 VSGGHDRVARLWATDHYQPLRIFAGH--LADVTCTRFHPNSNYIATGSADRTVRLWDVLN 638
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
I GH + L + +G +ATG+ D + +W+
Sbjct: 639 GNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWD 677
Score = 120 (47.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 37/152 (24%), Positives = 64/152 (42%)
Query: 25 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA 84
S+ A D+ + D ++ D + S + GH + +F P+ + S+D
Sbjct: 486 SVKAAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDG 545
Query: 85 TCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL 144
T RL+ ++ L Y N + FS G ++G D +W + + I
Sbjct: 546 TVRLWSLQTFTCLVGYKGHNY--PVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 603
Query: 145 AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
AGH V+C + +ATGS D +R+W+
Sbjct: 604 AGHLADVTCTRFHPNSNYIATGSADRTVRLWD 635
Score = 37 (18.1 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 8/14 (57%), Positives = 8/14 (57%)
Query: 12 GSPAASGHTGDVMS 25
G P ASG GD S
Sbjct: 118 GLPGASGGEGDASS 131
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 224 (83.9 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 51/141 (36%), Positives = 74/141 (52%)
Query: 37 SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFD-IRADQ 95
SG+ D + +LWD GS +QT GH + +V F P+G A+GS D T RL+D
Sbjct: 712 SGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSL 771
Query: 96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLG 155
+ + H N + SVAFS GRLL +G D +WD L GH + V +
Sbjct: 772 QQTLRGHSN---WVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVA 828
Query: 156 VTEDGMAVATGSWDSFLRIWN 176
+ DG +A+GS+D +R+W+
Sbjct: 829 FSPDGRLLASGSFDKTVRLWD 849
Score = 213 (80.0 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 53/151 (35%), Positives = 82/151 (54%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+G V+S++ +PD R SG+ D + +LWD GS +QT GH + + +V F P+G
Sbjct: 735 GHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLL 794
Query: 78 ATGSDDATCRLFD-IRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+GS D T RL+D + + H + + SVAFS GRLL +G D +WD
Sbjct: 795 ASGSFDKTVRLWDPATGSLQQTLRGHSDTV---RSVAFSPDGRLLASGSFDKTVRLWDPA 851
Query: 137 K--TERAGILAGHDNRVSCLGVTEDGMAVAT 165
++ I+ G V+ L ++DG ++T
Sbjct: 852 TGTLQQTLIIKG---TVTELQFSQDGSYIST 879
Score = 159 (61.0 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 43/126 (34%), Positives = 61/126 (48%)
Query: 52 GSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFD-IRADQELAMYSHDNIICGIT 110
G+ QT GH + + AV A+GSDD T RL+D + + H +
Sbjct: 693 GAELQTLEGHSNSVWAV--------LASGSDDETVRLWDPATGSLQQTLEGHSG---WVL 741
Query: 111 SVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDS 170
SVAFS GRLL +G D +WD L GH N V + + DG +A+GS+D
Sbjct: 742 SVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDK 801
Query: 171 FLRIWN 176
+R+W+
Sbjct: 802 TVRLWD 807
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 222 (83.2 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 54/160 (33%), Positives = 76/160 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V + AP FVS + D +A+LW + F GH SD++ V F PN
Sbjct: 490 GHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYV 549
Query: 78 ATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
ATGS D T RL+D Q + M H ++S+AFS GR L +G D N +WD
Sbjct: 550 ATGSSDRTVRLWDNMTGQSVRLMTGHKG---SVSSLAFSACGRYLASGSVDHNIIIWDLS 606
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L H + V+ + + DG +A D+ L +W+
Sbjct: 607 NGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWD 646
Score = 213 (80.0 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 49/160 (30%), Positives = 81/160 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG V + AP+M +S + D++ +LW + SC T+ GH + V F P+G+ F
Sbjct: 448 GHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYF 507
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ S D T RL+ ++Q L ++ H + + V F + + G D +WD+M
Sbjct: 508 VSCSYDKTARLWATDSNQALRVFVGH---LSDVDCVQFHPNSNYVATGSSDRTVRLWDNM 564
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ ++ GH VS L + G +A+GS D + IW+
Sbjct: 565 TGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWD 604
Score = 141 (54.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 35/124 (28%), Positives = 58/124 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH DV + P+ +G+ D + +LWD G + GH+ ++++ F G
Sbjct: 532 GHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYL 591
Query: 78 ATGSDDATCRLFDI-RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+GS D ++D+ + H + + T++ FSR G +L A D N +WD
Sbjct: 592 ASGSVDHNIIIWDLSNGSLVTTLLRHTSTV---TTITFSRDGTVLAAAGLDNNLTLWDFH 648
Query: 137 K-TE 139
K TE
Sbjct: 649 KVTE 652
Score = 122 (48.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 35/153 (22%), Positives = 65/153 (42%)
Query: 25 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA 84
+L A +R + D + ++ D R G ++ GH + F P + S+D+
Sbjct: 413 TLKDADSLRELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDS 472
Query: 85 TCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI 143
T RL+ + + Y H + + V F+ G ++ D +W + + +
Sbjct: 473 TIRLWSLLTWSCVVTYRGH---VYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRV 529
Query: 144 LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
GH + V C+ + VATGS D +R+W+
Sbjct: 530 FVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWD 562
Score = 110 (43.8 bits), Expect = 0.00070, P = 0.00070
Identities = 26/86 (30%), Positives = 40/86 (46%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH G V SL+ + R SG+ D + +WD+ +GS T H S + +TF +G
Sbjct: 573 TGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTV 632
Query: 77 FATGSDDATCRLFDIRADQELAMYSH 102
A D L+D E + +H
Sbjct: 633 LAAAGLDNNLTLWDFHKVTEDYISNH 658
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 213 (80.0 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 42/160 (26%), Positives = 82/160 (51%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + S+ +PD + S + D + K+W DG ++T GH+ I+ + + +
Sbjct: 44 GHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLI 103
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ SDD T +++D+ + + + + H + G V+F+ L+++G D N +WD
Sbjct: 104 CSASDDKTIKIWDVESGKMVKTLKGHKEYVFG---VSFNPQSNLIVSGSFDENVRIWDVN 160
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
E +++ H + V+ + DG V +GS+D +RIW+
Sbjct: 161 TGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWD 200
Score = 186 (70.5 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 47/163 (28%), Positives = 74/163 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V +S P VSG+ D + ++WD+ G C + H + V F +G
Sbjct: 128 GHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLV 187
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+GS D T R++D Q L S ++ ++ V FS +G+ +LAG D +W
Sbjct: 188 VSGSYDGTVRIWDTTTGQLLNTISTEDGK-EVSFVKFSPNGKFVLAGTLDNTLRLWSYNN 246
Query: 138 TERA-GILAGHDNRVSCLGVTED---GMAVATGSWDSFLRIWN 176
++ GH N C+ T G + TGS D+ + I+N
Sbjct: 247 NKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYN 289
Score = 141 (54.7 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 34/123 (27%), Positives = 58/123 (47%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVA 113
K T GH I++V F P+G A+ S D T +++ + E + H GI+ +A
Sbjct: 39 KYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKE---GISDIA 95
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
+S+ +L+ + DD +WD + L GH V + + +GS+D +R
Sbjct: 96 WSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVR 155
Query: 174 IWN 176
IW+
Sbjct: 156 IWD 158
Score = 132 (51.5 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 42/164 (25%), Positives = 73/164 (44%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHES-DINAVTFFPNGW 75
S H+ V + D VSG+ D + ++WD G T + +++ V F PNG
Sbjct: 169 SAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGK 228
Query: 76 AFATGSDDATCRLFDIRADQE-LAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
G+ D T RL+ +++ L Y+ H N I S G+ ++ G +D ++
Sbjct: 229 FVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIY 288
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW--DSFLRIW 175
+ E LAGH++ V + +A+G+ D ++IW
Sbjct: 289 NLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 216 (81.1 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 48/161 (29%), Positives = 79/161 (49%)
Query: 18 GHTGDVMSLSLA-PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GH V +++ P +G+ D + KLW G C TF GH ++I + F P
Sbjct: 132 GHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTL 191
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
ATGS D T +L+D+ + +E++ + H I S+ F+ +G L+ G D +WD
Sbjct: 192 VATGSMDTTAKLWDVESGEEVSTLAGH---FAEIISLCFNTTGDRLVTGSFDHTAILWDV 248
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ +L+GH +SC+ D +AT S D ++W+
Sbjct: 249 PSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWD 289
Score = 191 (72.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 47/160 (29%), Positives = 79/160 (49%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT +++ L+ P +G+ D +AKLWD+ G T GH ++I ++ F G
Sbjct: 175 GHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRL 234
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
TGS D T L+D+ + +++ + S H I+ V F+ L+ D +C VWD+
Sbjct: 235 VTGSFDHTAILWDVPSGRKVHVLSGHRG---EISCVQFNWDCSLIATASLDKSCKVWDAE 291
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L GH++ V + G +AT S D R+++
Sbjct: 292 GGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFS 331
Score = 187 (70.9 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 49/162 (30%), Positives = 70/162 (43%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
SGH G++ + D + + D S K+WD G C T GH ++ V F G
Sbjct: 258 SGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQL 317
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
AT S D T R+F Q L + H I+ V F+ G +L D VW
Sbjct: 318 IATASADGTSRVFSTDTFQCLCQLEGHKG---EISKVCFNAQGSRVLTASVDKTSRVW-C 373
Query: 136 MKTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+KT +L GH + + +G + TGS D+ RIW+
Sbjct: 374 VKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIWH 415
Score = 181 (68.8 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 44/143 (30%), Positives = 65/143 (45%)
Query: 35 FVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFF-PNGWAFATGSDDATCRLFDIRA 93
F++G+ D + K+WD G T GH + + A+ F P G ATGS D TC+L+ A
Sbjct: 107 FITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWS--A 164
Query: 94 DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSC 153
+ Y+ I +AF+ L+ G D +WD E LAGH +
Sbjct: 165 ETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIIS 224
Query: 154 LGVTEDGMAVATGSWDSFLRIWN 176
L G + TGS+D +W+
Sbjct: 225 LCFNTTGDRLVTGSFDHTAILWD 247
Score = 162 (62.1 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 44/160 (27%), Positives = 73/160 (45%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH +++SL V+G+ D +A LWD+ G GH +I+ V F +
Sbjct: 216 AGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSL 275
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
AT S D +C+++D Q LA + H++ + V F+ +G+L+ D V+ +
Sbjct: 276 IATASLDKSCKVWDAEGGQCLATLLGHND---EVLDVCFNYTGQLIATASADGTSRVFST 332
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ L GH +S + G V T S D R+W
Sbjct: 333 DTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVW 372
Score = 144 (55.7 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 35/118 (29%), Positives = 55/118 (46%)
Query: 61 HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRS-G 118
H + V F +G F TGS D TC+++D + +EL + H N++ I AF+ G
Sbjct: 91 HILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAI---AFNNPYG 147
Query: 119 RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ G D C +W + + GH + CL VATGS D+ ++W+
Sbjct: 148 DKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWD 205
Score = 125 (49.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 28/80 (35%), Positives = 42/80 (52%)
Query: 98 AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVT 157
A+ +H I +T+VAF++SG + G D C +WD+ E L GH N V +
Sbjct: 87 ALQAH---ILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 158 ED-GMAVATGSWDSFLRIWN 176
G VATGS+D ++W+
Sbjct: 144 NPYGDKVATGSFDKTCKLWS 163
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 211 (79.3 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 51/164 (31%), Positives = 79/164 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V + P VSG+ D S ++WD++ G C +T P H ++AV F +G
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ S D CR++D + Q L + DN ++ V FS +G+ +LA D +WD
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNP--PVSFVKFSPNGKYILAATLDNTLKLWDYS 244
Query: 137 KTERAGILAGHDNRVSCL----GVTEDGMAVATGSWDSFLRIWN 176
K + H N C+ VT G + +GS D+ + IWN
Sbjct: 245 KGKCLKTYTCHKNEKYCIFANFSVT-GGKWIVSGSEDNLVYIWN 287
Score = 191 (72.3 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 42/162 (25%), Positives = 82/162 (50%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
SGH + ++ + D VS + D + K+WD+ G C +T GH + + F P
Sbjct: 84 SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL 143
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+GS D + R++D++ + L + +H + +++V F+R G L+++ D C +WD+
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSD---PVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 136 MKTERAGILAGHDNR-VSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L DN VS + + +G + + D+ L++W+
Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 191 (72.3 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 45/163 (27%), Positives = 80/163 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT V S+ +P+ S + D K+W DG ++T GH+ I+ V + +
Sbjct: 42 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL 101
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDN-IICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+ SDD T +++D+ + + L + H N + C F+ L+++G D + +WD
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFC----CNFNPQSNLIVSGSFDESVRIWD 157
Query: 135 SMKTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+KT + L H + VS + DG + + S+D RIW+
Sbjct: 158 -VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 152 (58.6 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 37/123 (30%), Positives = 57/123 (46%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVA 113
K T GH +++V F PNG A+ S D +++ + E + H GI+ VA
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK---LGISDVA 94
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
+S LL++ DD +WD + L GH N V C + +GS+D +R
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 174 IWN 176
IW+
Sbjct: 155 IWD 157
Score = 127 (49.8 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 40/162 (24%), Positives = 73/162 (45%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD-INAVTFFPNGWAF 77
H+ V ++ D VS + D ++WD G C +T ++ ++ V F PNG
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+ D T +L+D + L Y+ H N C + + + G+ +++G +D +W+
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVT-GGKWIVSGSEDNLVYIWNL 288
Query: 136 MKTERAGILAGHDNRV--SCLGVTEDGMAVATGSWDSFLRIW 175
E L GH + V + TE+ +A A D +++W
Sbjct: 289 QTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>UNIPROTKB|E1BL00 [details] [associations]
symbol:PWP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 KO:K14558 OMA:VWQCDTP
InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 CTD:5822 EMBL:DAAA02003485 IPI:IPI00686265
RefSeq:XP_002685190.1 RefSeq:XP_592170.3 ProteinModelPortal:E1BL00
Ensembl:ENSBTAT00000009343 GeneID:514336 KEGG:bta:514336
NextBio:20871282 Uniprot:E1BL00
Length = 919
Score = 221 (82.9 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 51/161 (31%), Positives = 79/161 (49%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH ++SL+ +PD + V+G D K+W+ G C TF H S + VTF G+
Sbjct: 369 GHFNSMVSLAYSPDGQYIVTGGDDGKVKVWNSLSGFCFVTFTEHSSGVTGVTFTTTGYVI 428
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAG-YDDFNCNVWDSM 136
T S D T R FD+ + ++ + VA SG ++ AG D F +W SM
Sbjct: 429 VTSSMDGTVRAFDLHRYRNFRTFTSPRPT-QFSCVAVDSSGEIVSAGAQDSFEVFIW-SM 486
Query: 137 KTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+T R +L+GH+ +S L +A+ SWD + +W+
Sbjct: 487 QTGRLLDVLSGHEGPISGLCFNPMKSVLASASWDRTVHLWD 527
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 216 (81.1 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 50/161 (31%), Positives = 78/161 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V ++ +PD SG D + K+W G TF GH + I+ +++ P+G
Sbjct: 174 GHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATI 233
Query: 78 ATGSDDATCRLFDIRADQE--LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
A+GSDD T RL+++ + H N + I AFS G +L++G D +WD
Sbjct: 234 ASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAI---AFSPKGNMLVSGSYDEAVFLWDV 290
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L H + VS + V DG +A+ + D +RIW+
Sbjct: 291 RSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWD 331
Score = 175 (66.7 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 45/162 (27%), Positives = 80/162 (49%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT-FPGHESDINAVTFFPNGWA 76
GH + ++S +PD T SG+ D + +LW++ G T F GH + + A+ F P G
Sbjct: 216 GHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNM 275
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+GS D L+D+R+ + + ++ +H + + GI V G L+ + D +WD+
Sbjct: 276 LVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVW---DGTLIASCATDGLVRIWDT 332
Query: 136 MKTERAGILAGHDNR-VSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L DN VS + + +G V + D +R+W+
Sbjct: 333 STGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWD 374
Score = 149 (57.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 37/134 (27%), Positives = 63/134 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V +++ +P VSG+ D + LWD+R ++ P H ++ + +G
Sbjct: 259 GHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLI 318
Query: 78 ATGSDDATCRLFDIRADQELAMYSH-DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+ + D R++D Q L H DN ++SV FS +G+ +LA D +WD +
Sbjct: 319 ASCATDGLVRIWDTSTGQCLRTLVHEDNP--PVSSVKFSPNGKYVLAWTLDDCVRLWDYV 376
Query: 137 KTERAGILAGHDNR 150
+ GH N+
Sbjct: 377 EGRCLKTYQGHSNK 390
Score = 115 (45.5 bits), Expect = 0.00011, P = 0.00011
Identities = 33/131 (25%), Positives = 66/131 (50%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVT--F------FPN- 73
V S+ +P+ + ++ D +LWD +G C +T+ GH + +++ F P
Sbjct: 349 VSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGR 408
Query: 74 --GWAFA-TGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFN 129
G+AFA +GS+D +D+ + L + +HD ++ G+ + + + GR +++ D
Sbjct: 409 TPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCS-TGEGRFMVSCGLDGT 467
Query: 130 CNVWDSMKTER 140
VW+ + ER
Sbjct: 468 VRVWEEVGPER 478
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 212 (79.7 bits), Expect = 9.0e-17, P = 9.0e-17
Identities = 49/161 (30%), Positives = 82/161 (50%)
Query: 17 SGHTGDVMSLSLAPDMRTFVS-GACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW 75
+GH G++ +L+ +P T V+ G D A LW I +G PGH+ ++ + F +G
Sbjct: 67 TGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQ 126
Query: 76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
A+G D ++FD + + D GI V + G ++LAG +D + +W++
Sbjct: 127 LLASGGLDGVVQIFDASSGTLKCVL--DGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNA 184
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K + +GH+ V+C T DG + TGS D+ L +WN
Sbjct: 185 DKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWN 225
Score = 171 (65.3 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 50/166 (30%), Positives = 77/166 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V L+ + D + SG D +++D G+ K G + I V + P G
Sbjct: 111 GHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIV 170
Query: 78 ATGSDDATCRLFDIRADQE--LAMYS-HD-NIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
GS+D C L+ AD+E L M+S H+ N+ CG F+ G+L+ G DD + VW
Sbjct: 171 LAGSED--CSLWMWNADKEAYLNMFSGHNLNVTCG----DFTPDGKLICTGSDDASLIVW 224
Query: 134 DSMKTERAGILAGHDNR---VSCLGVTEDGMAVATGSWDSFLRIWN 176
+ E I+ GH ++CL + + +GS D + I N
Sbjct: 225 NPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVN 270
Score = 118 (46.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 34/160 (21%), Positives = 68/160 (42%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF- 77
HT + L + + +SG+ D S + +I G + H + V F P+
Sbjct: 241 HTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIP 300
Query: 78 --ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
ATG D ++D++ + H+ G+TS+ + + + L G + ++WDS
Sbjct: 301 LAATGGMDKKLIIWDLQHSTPRFICEHEE---GVTSLTWIGTSKYLATGCANGTVSIWDS 357
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ GH + V + V+ + + + S D+ R++
Sbjct: 358 LLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVF 397
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 201 (75.8 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 41/159 (25%), Positives = 71/159 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V S+ P S + D++ ++W + G+C Q HES + ++ G
Sbjct: 263 GHTKKVSSVIYHPAQAVVFSASSDSTIRVWSVTGGNCVQVVRAHESAVTGLSLHATGDYL 322
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+ S+D DI+ + L + + C +T F G + G D +WD +
Sbjct: 323 LSSSEDQYWAFSDIQTGRVLTKVTDETAGCALTCAQFHPDGLIFGTGTGDSQIKIWDLKE 382
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
GH V+ + +E+G +ATG+ DS L++W+
Sbjct: 383 RTNVANFPGHSGPVTAIAFSENGYYLATGAQDSSLKLWD 421
Score = 171 (65.3 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 36/122 (29%), Positives = 63/122 (51%)
Query: 30 PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF 89
PD F +G D+ K+WD+++ + FPGH + A+ F NG+ ATG+ D++ +L+
Sbjct: 361 PDGLIFGTGTGDSQIKIWDLKERTNVANFPGHSGPVTAIAFSENGYYLATGAQDSSLKLW 420
Query: 90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFN---CNVWDSMK--TERAGIL 144
D+R + + DN + S+ F +SG L G D C W + ++ +G++
Sbjct: 421 DLRKLKNFKTITLDNNY-EVKSLVFDQSGTYLAVGGSDIRVYICKQWSEVLNFSDHSGLV 479
Query: 145 AG 146
G
Sbjct: 480 TG 481
Score = 131 (51.2 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 42/183 (22%), Positives = 82/183 (44%)
Query: 3 DHLDKSALLGSPAA--SGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFP 59
+ L K +GS A S ++SL L P D ++G D + ++D R+ T
Sbjct: 203 EDLSKYRQVGSHAGLHSASVPGILSLDLCPTDTNKVLTGGADKNVVVFDRREEQIVATLK 262
Query: 60 GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSG 118
GH +++V + P + S D+T R++ + + + +H++ + G++ A +G
Sbjct: 263 GHTKKVSSVIYHPAQAVVFSASSDSTIRVWSVTGGNCVQVVRAHESAVTGLSLHA---TG 319
Query: 119 RLLLAGYDDFNCNVWDSMKTERAGILAGHDNR-----VSCLGVTEDGMAVATGSWDSFLR 173
LL+ +D W + +L + ++C DG+ TG+ DS ++
Sbjct: 320 DYLLSSSED---QYWAFSDIQTGRVLTKVTDETAGCALTCAQFHPDGLIFGTGTGDSQIK 376
Query: 174 IWN 176
IW+
Sbjct: 377 IWD 379
Score = 35 (17.4 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 7 KSALLGSPAASGHTGDVMSLS 27
++A PAA G G+ M +S
Sbjct: 144 QAAPASQPAAVGAGGEAMEVS 164
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 213 (80.0 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 51/160 (31%), Positives = 84/160 (52%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG V S ++ ++ +SG+ D + K+WD+ G+C T GH S + + +G
Sbjct: 1033 GHTGGVWSSQMSGNI--IISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHL--HGSKV 1088
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+GS DAT R++DI L + H + + V + G+L+++G D+ +W
Sbjct: 1089 VSGSRDATLRVWDIEQGSCLHVLVGH---LAAVRCVQYD--GKLIVSGAYDYMVKIWHPE 1143
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ E L GH NRV L DG+ V +GS D+ +R+W+
Sbjct: 1144 RQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWD 1181
Score = 148 (57.2 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 40/122 (32%), Positives = 61/122 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V SL D VSG+ D S ++WD+ G+CK T GH+S + + N
Sbjct: 1153 GHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQN--IL 1208
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNII-CGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ D+T +++DI Q L S N +T + F+ R ++ DD +WD +
Sbjct: 1209 VSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFN--SRFVVTSSDDGTVKLWD-V 1265
Query: 137 KT 138
KT
Sbjct: 1266 KT 1267
Score = 138 (53.6 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 43/161 (26%), Positives = 74/161 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V++ R VSG+ D + K+W +G C +T GH + + +G
Sbjct: 992 GHDDHVITCLQFSGNR-IVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQM--SGNII 1048
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVA--FSRSGRLLLAGYDDFNCNVWDS 135
+GS D T +++D+ D +++ + G TS G +++G D VWD
Sbjct: 1049 ISGSTDRTLKVWDM--DSGACVHT----LQGHTSTVRCMHLHGSKVVSGSRDATLRVWDI 1102
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ +L GH V C V DG + +G++D ++IW+
Sbjct: 1103 EQGSCLHVLVGHLAAVRC--VQYDGKLIVSGAYDYMVKIWH 1141
Score = 134 (52.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 41/160 (25%), Positives = 75/160 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V + L VSG+ DA+ ++WDI GSC GH + + V + +G
Sbjct: 1073 GHTSTVRCMHLHGSK--VVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQY--DGKLI 1128
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ D +++ + L + H N + S+ F G +++G D + VWD
Sbjct: 1129 VSGAYDYMVKIWHPERQECLHTLQGHTN---RVYSLQFD--GLHVVSGSLDTSIRVWDVE 1183
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH + S + + ++ + +G+ DS +++W+
Sbjct: 1184 TGNCKHTLMGHQSLTSGMELRQN--ILVSGNADSTVKVWD 1221
Score = 129 (50.5 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 42/163 (25%), Positives = 72/163 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V + D + VSGA D K+W C T GH + + ++ F +G
Sbjct: 1113 GHLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQF--DGLHV 1168
Query: 78 ATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+GS D + R++D+ + + H ++ G+ R +L++G D VWD
Sbjct: 1169 VSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMEL----RQN-ILVSGNADSTVKVWDIT 1223
Query: 137 KTERAGILAG---HDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L+G H + V+CL + V T S D +++W+
Sbjct: 1224 TGQCLQTLSGPNKHHSAVTCLQF--NSRFVVTSSDDGTVKLWD 1264
Score = 35 (17.4 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 13 SPAASGHTGDVMSLSLAP 30
+P +S H G LS+ P
Sbjct: 797 TPRSSQHLGPTAVLSVTP 814
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 215 (80.7 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 56/161 (34%), Positives = 86/161 (53%)
Query: 20 TGD--VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
+GD + S+ +PD + +GA D ++WDI + K F GHE DI ++ F NG
Sbjct: 314 SGDLYIRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYI 373
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
A+GS D T RL+DI A+ +L +Y+ +I G+T+VA S G + AG D VWD+
Sbjct: 374 ASGSGDKTVRLWDI-AEGKL-VYTL-SIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTT 430
Query: 138 ---TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
ER GH + V + +G + +GS D +++W
Sbjct: 431 GYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLW 471
Score = 165 (63.1 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 51/172 (29%), Positives = 82/172 (47%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
SGH D+ SL A + R SG+ D + +LWDI +G T E + V P+G
Sbjct: 355 SGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTL-SIEDGVTTVAMSPDGLY 413
Query: 77 FATGSDDATCRLFDIRADQELAMYSH-DNIICGITSVAFSRSGRLLLAGYDDFNCNVWD- 134
A GS D T R++D + + D + SVAF+ +G+ L++G D +W+
Sbjct: 414 VAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWEL 473
Query: 135 SMKTER---AG-------ILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ ++ AG GH + V + +T DG V +GS D ++ W+
Sbjct: 474 NLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWD 525
Score = 158 (60.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 44/165 (26%), Positives = 75/165 (45%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF--P-GHESDINAVTFFPNGWAFAT 79
V +++++PD +G+ D + ++WD G + P GH+ + +V F PNG +
Sbjct: 402 VTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVS 461
Query: 80 GSDDATCRLFDIRADQELAMYSHDNIIC-----G----ITSVAFSRSGRLLLAGYDDFNC 130
GS D T +L+++ ++ + C G + SV + G +++G D
Sbjct: 462 GSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGV 521
Query: 131 NVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
WD + +L GH N V + + G ATGS D RIW
Sbjct: 522 QFWDPITGNAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIW 566
Score = 143 (55.4 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 36/120 (30%), Positives = 60/120 (50%)
Query: 61 HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNII-CG---ITSVAFSR 116
H+S + V F +G ATG + + ++FD+ Q +A+ +++ G I SV FS
Sbjct: 268 HDSVVCCVRFSRDGKYLATGCN-RSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSP 326
Query: 117 SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
G+ L G +D VWD I +GH+ + L +G +A+GS D +R+W+
Sbjct: 327 DGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWD 386
Score = 120 (47.3 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V+S+ L PD +SG+ D + WD G+ + GH++ + +V P G F
Sbjct: 495 GHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNLF 554
Query: 78 ATGSDDATCRLF 89
ATGS D R++
Sbjct: 555 ATGSGDMRARIW 566
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 207 (77.9 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 51/162 (31%), Positives = 75/162 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V P VSG+ D S K+W+++ G C +T H I+AV F NG
Sbjct: 121 GHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLI 180
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+GS D CR++D + Q L + D ++ V FS +G+ +L D +WD +
Sbjct: 181 VSGSYDGLCRIWDAASGQCLRTLA-DEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSR 239
Query: 138 TERAGILAGHDNRVSCL--GVTEDGMA-VATGSWDSFLRIWN 176
GH N CL + G V +GS D+ + IWN
Sbjct: 240 GRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWN 281
Score = 200 (75.5 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 45/163 (27%), Positives = 85/163 (52%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH+ + S+ +P+ S A DA +W DG+CK+T GH +I+ V + +
Sbjct: 36 AGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSR 95
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSH-DNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+ SDD T +++D+R+ + L + H D + C F+ L+++G D + +W+
Sbjct: 96 LVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFC----CDFNPPSNLIVSGSFDESVKIWE 151
Query: 135 SMKTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+KT + L+ H + +S + +G + +GS+D RIW+
Sbjct: 152 -VKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWD 193
Score = 137 (53.3 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 44/166 (26%), Positives = 78/166 (46%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD-INAVTFFPNGW 75
S H+ + +++ + VSG+ D ++WD G C +T + ++ V F PNG
Sbjct: 162 SAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGK 221
Query: 76 AFATGSDDATCRLFDIRADQELAMYS-HDNI-ICGITSVAFSRSGRL-LLAGYDDFNCNV 132
T + D T +L+D + L Y+ H N C S FS +GR +++G +D +
Sbjct: 222 YILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFAS--FSVTGRKWVVSGSEDNMVYI 279
Query: 133 WDSMKTERAGILAGHDNRV--SCLGVTEDGMAVATGSWDSFLRIWN 176
W+ E L GH + V + T++ +A A D +++W+
Sbjct: 280 WNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVWS 325
Score = 132 (51.5 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 34/120 (28%), Positives = 55/120 (45%)
Query: 57 TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR-ADQELAMYSHDNIICGITSVAFS 115
T GH + I++V F PNG A+ + DA ++ + + +Y H I+ VA+S
Sbjct: 34 TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHS---LEISDVAWS 90
Query: 116 RSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L++ DD VWD + L GH + V C + +GS+D ++IW
Sbjct: 91 SDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIW 150
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 213 (80.0 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 54/167 (32%), Positives = 89/167 (53%)
Query: 20 TGD--VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
+GD + S+ +PD + +GA D ++WD+ + GHE DI ++ FFP+G
Sbjct: 253 SGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRL 312
Query: 78 ATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+GS D + R++D+R Q L + D G+T+VA S G+L+ AG D VWDS
Sbjct: 313 VSGSGDRSVRIWDLRTSQCSLTLSIED----GVTTVAVSPDGKLIAAGSLDRTVRVWDST 368
Query: 137 K---TER--AGILAG--HDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
ER +G G H++ V + + +G +A+GS D +++W+
Sbjct: 369 TGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWH 415
Score = 156 (60.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 49/169 (28%), Positives = 74/169 (43%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH D+ SL PD VSG+ D S ++WD+R C T E + V P+G
Sbjct: 295 GHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTL-SIEDGVTTVAVSPDGKLI 353
Query: 78 ATGSDDATCRLFDIRAD--QELAMYSHDN---IICGITSVAFSRSGRLLLAGYDDFNCNV 132
A GS D T R++D E ++N + SVAFS +G + +G D +
Sbjct: 354 AAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKL 413
Query: 133 WD-SMKTERAGILA----GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
W K+++ GH + V + T D + +GS D + W+
Sbjct: 414 WHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWD 462
Score = 146 (56.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 46/170 (27%), Positives = 77/170 (45%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDIRDG-------SCKQTFPGHESDINAVTFFPNGW 75
V +++++PD + +G+ D + ++WD G S + GHE + +V F NG
Sbjct: 341 VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGE 400
Query: 76 AFATGSDDATCRLFDI--RADQ----ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFN 129
A+GS D T +L+ + ++D+ E+ H + + SV + +L+G D
Sbjct: 401 QIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVL---SVCCTPDNEYILSGSKDRG 457
Query: 130 CNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV----ATGSWDSFLRIW 175
WD +L GH N V + V+ + ATGS D RIW
Sbjct: 458 VIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIW 507
Score = 123 (48.4 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 41/129 (31%), Positives = 63/129 (48%)
Query: 61 HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY----SHDN-----IICG--- 108
H S + V F +G ATG + T ++F++ + +A S++N G
Sbjct: 199 HSSVVCCVRFSRDGKFIATGCNKTT-QVFNVTTGELVAKLIDESSNENKDDNTTASGDLY 257
Query: 109 ITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERA-GILAGHDNRVSCLGVTEDGMAVATGS 167
I SV FS G+LL G +D +WD + T+R IL GH+ + L DG + +GS
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWD-LSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGS 316
Query: 168 WDSFLRIWN 176
D +RIW+
Sbjct: 317 GDRSVRIWD 325
Score = 108 (43.1 bits), Expect = 0.00084, P = 0.00084
Identities = 30/130 (23%), Positives = 57/130 (43%)
Query: 12 GSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDI-----RDGSCKQTFPGHESDIN 66
G+ +GH V S++ + + SG+ D + KLW + + +C+ T+ GH+ +
Sbjct: 379 GNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVL 438
Query: 67 AVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGR--LLLA 123
+V P+ +GS D +D + L M H N + + +V+ + G +
Sbjct: 439 SVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISV-AVSLNSKGTEGIFAT 497
Query: 124 GYDDFNCNVW 133
G D +W
Sbjct: 498 GSGDCKARIW 507
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 213 (80.0 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 54/167 (32%), Positives = 89/167 (53%)
Query: 20 TGD--VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
+GD + S+ +PD + +GA D ++WD+ + GHE DI ++ FFP+G
Sbjct: 253 SGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRL 312
Query: 78 ATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+GS D + R++D+R Q L + D G+T+VA S G+L+ AG D VWDS
Sbjct: 313 VSGSGDRSVRIWDLRTSQCSLTLSIED----GVTTVAVSPDGKLIAAGSLDRTVRVWDST 368
Query: 137 K---TER--AGILAG--HDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
ER +G G H++ V + + +G +A+GS D +++W+
Sbjct: 369 TGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWH 415
Score = 156 (60.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 49/169 (28%), Positives = 74/169 (43%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH D+ SL PD VSG+ D S ++WD+R C T E + V P+G
Sbjct: 295 GHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTL-SIEDGVTTVAVSPDGKLI 353
Query: 78 ATGSDDATCRLFDIRAD--QELAMYSHDN---IICGITSVAFSRSGRLLLAGYDDFNCNV 132
A GS D T R++D E ++N + SVAFS +G + +G D +
Sbjct: 354 AAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKL 413
Query: 133 WD-SMKTERAGILA----GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
W K+++ GH + V + T D + +GS D + W+
Sbjct: 414 WHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWD 462
Score = 146 (56.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 46/170 (27%), Positives = 77/170 (45%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDIRDG-------SCKQTFPGHESDINAVTFFPNGW 75
V +++++PD + +G+ D + ++WD G S + GHE + +V F NG
Sbjct: 341 VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGE 400
Query: 76 AFATGSDDATCRLFDI--RADQ----ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFN 129
A+GS D T +L+ + ++D+ E+ H + + SV + +L+G D
Sbjct: 401 QIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVL---SVCCTPDNEYILSGSKDRG 457
Query: 130 CNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV----ATGSWDSFLRIW 175
WD +L GH N V + V+ + ATGS D RIW
Sbjct: 458 VIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIW 507
Score = 123 (48.4 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 41/129 (31%), Positives = 63/129 (48%)
Query: 61 HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY----SHDN-----IICG--- 108
H S + V F +G ATG + T ++F++ + +A S++N G
Sbjct: 199 HSSVVCCVRFSRDGKFIATGCNKTT-QVFNVTTGELVAKLIDESSNENKDDNTTASGDLY 257
Query: 109 ITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERA-GILAGHDNRVSCLGVTEDGMAVATGS 167
I SV FS G+LL G +D +WD + T+R IL GH+ + L DG + +GS
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWD-LSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGS 316
Query: 168 WDSFLRIWN 176
D +RIW+
Sbjct: 317 GDRSVRIWD 325
Score = 108 (43.1 bits), Expect = 0.00084, P = 0.00084
Identities = 30/130 (23%), Positives = 57/130 (43%)
Query: 12 GSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDI-----RDGSCKQTFPGHESDIN 66
G+ +GH V S++ + + SG+ D + KLW + + +C+ T+ GH+ +
Sbjct: 379 GNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVL 438
Query: 67 AVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGR--LLLA 123
+V P+ +GS D +D + L M H N + + +V+ + G +
Sbjct: 439 SVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISV-AVSLNSKGTEGIFAT 497
Query: 124 GYDDFNCNVW 133
G D +W
Sbjct: 498 GSGDCKARIW 507
>UNIPROTKB|G4N183 [details] [associations]
symbol:MGG_07465 "Periodic tryptophan protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001233 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 KO:K14558 InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
RefSeq:XP_003711369.1 ProteinModelPortal:G4N183
EnsemblFungi:MGG_07465T0 GeneID:2683385 KEGG:mgr:MGG_07465
Uniprot:G4N183
Length = 900
Score = 217 (81.4 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 48/160 (30%), Positives = 77/160 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + +L+ +PD + V+ A D K+WDI G C TF H S + A F G
Sbjct: 341 GHFDSMNALAYSPDGKRIVTAADDGKLKVWDIESGFCIVTFTEHTSGVTACQFAKKGNVL 400
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAG-YDDFNCNVWDSM 136
T S D + R +D+ + ++ + + +A SG ++ AG D F+ ++W
Sbjct: 401 FTASLDGSIRAWDLIRYRNFRTFTAPTRL-SFSCMAVDPSGEVVAAGSLDSFDVHIWSVQ 459
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L+GH+ VS + DG + +GSWD RIW+
Sbjct: 460 TGQLLDQLSGHEGPVSAVAFAPDGGLLVSGSWDKTARIWS 499
Score = 141 (54.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 40/158 (25%), Positives = 70/158 (44%)
Query: 22 DVMSLSLAPDMRTFVSGACDASAKL-WDIRDGSCKQTFPGHESDINAVTFFPNGWAFATG 80
D +S++ + + F GA L W+ + S GH +NA+ + P+G T
Sbjct: 304 DFVSINKSGEWLAF--GASKLGQLLVWEWQSESYILKQQGHFDSMNALAYSPDGKRIVTA 361
Query: 81 SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER 140
+DD +++DI + + ++ G+T+ F++ G +L D + WD ++
Sbjct: 362 ADDGKLKVWDIESGFCIVTFTEHT--SGVTACQFAKKGNVLFTASLDGSIRAWDLIRYRN 419
Query: 141 AGILAGHDN-RVSCLGVTEDGMAVATGSWDSF-LRIWN 176
SC+ V G VA GS DSF + IW+
Sbjct: 420 FRTFTAPTRLSFSCMAVDPSGEVVAAGSLDSFDVHIWS 457
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 216 (81.1 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 49/160 (30%), Positives = 79/160 (49%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+G V S S +PD + +SG+ D + +LW + + ++ GH + V+F P G F
Sbjct: 523 GHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYF 582
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
AT S D T RL+ L +++ H N + V+F +G + G D C +WD
Sbjct: 583 ATASHDQTARLWSCDHIYPLRIFAGHLN---DVDCVSFHPNGCYVFTGSSDKTCRMWDVS 639
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + GH V + V DG ++TGS D + +W+
Sbjct: 640 TGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWD 679
Score = 214 (80.4 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 49/161 (30%), Positives = 80/161 (49%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V +S +P F + + D +A+LW + F GH +D++ V+F PNG
Sbjct: 565 GHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYV 624
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
TGS D TCR++D+ + ++ H + S+A GR L G +D NVWD
Sbjct: 625 FTGSSDKTCRMWDVSTGDSVRLFLGHT---APVISIAVCPDGRWLSTGSEDGIINVWDIG 681
Query: 137 KTERAGILAGHD-NRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+R + GH N + L +++G + +G D +R+W+
Sbjct: 682 TGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWD 722
Score = 168 (64.2 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 39/137 (28%), Positives = 68/137 (49%)
Query: 2 CDHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGH 61
CDH+ + +GH DV +S P+ +G+ D + ++WD+ G + F GH
Sbjct: 596 CDHIYPLRIF-----AGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGH 650
Query: 62 ESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRL 120
+ + ++ P+G +TGS+D ++DI + L M H I S+++S+ G +
Sbjct: 651 TAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKN--AIYSLSYSKEGNV 708
Query: 121 LLAGYDDFNCNVWDSMK 137
L++G D VWD K
Sbjct: 709 LISGGADHTVRVWDLKK 725
Score = 146 (56.5 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 38/126 (30%), Positives = 54/126 (42%)
Query: 51 DGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGIT 110
D +CK T GH + + +F P+ +GS+D T RL+ + L Y N +
Sbjct: 515 DPTCK-TLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNH--PVW 571
Query: 111 SVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDS 170
V+FS G D +W I AGH N V C+ +G V TGS D
Sbjct: 572 DVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDK 631
Query: 171 FLRIWN 176
R+W+
Sbjct: 632 TCRMWD 637
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 213 (80.0 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 55/160 (34%), Positives = 77/160 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V +P FVSG D A+LW + F GH +D+N F PN
Sbjct: 343 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV 402
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
ATGS D T RL+D+ + +++ H I +T FS +GR L G D +WD
Sbjct: 403 ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLT---FSPNGRFLATGATDGRVLLWDIG 459
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
G L GH + V L + DG +A+GS D+ +R+W+
Sbjct: 460 HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 499
Score = 203 (76.5 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 41/122 (33%), Positives = 67/122 (54%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH DV P+ +G+ D + +LWD+ +G+C + F GH+ I+++TF PNG
Sbjct: 384 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 443
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
ATG+ D L+DI + + H + +C S+ FSR G +L +G D +WD+
Sbjct: 444 LATGATDGRVLLWDIGHGLMVGELKGHTDTVC---SLRFSRDGEILASGSMDNTVRLWDA 500
Query: 136 MK 137
+K
Sbjct: 501 VK 502
Score = 177 (67.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 39/159 (24%), Positives = 70/159 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+G V S +PD +S + D + +LW ++ +C + GH + F P G+ F
Sbjct: 301 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF 360
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+G D RL+ Q L +++ + + F + + G D +WD +
Sbjct: 361 VSGGHDRVARLWATDHYQPLRIFAGH--LADVNCTRFHPNSNYVATGSADRTVRLWDVLN 418
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
I GH + L + +G +ATG+ D + +W+
Sbjct: 419 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 457
Score = 123 (48.4 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 38/152 (25%), Positives = 64/152 (42%)
Query: 25 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA 84
S+ A D+ + D ++ D + S + GH + +F P+ + S+D
Sbjct: 266 SVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDG 325
Query: 85 TCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL 144
T RL+ ++ L Y N + FS G ++G D +W + + I
Sbjct: 326 TVRLWSLQTFTCLVGYKGHNY--PVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 383
Query: 145 AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
AGH V+C + VATGS D +R+W+
Sbjct: 384 AGHLADVNCTRFHPNSNYVATGSADRTVRLWD 415
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 210 (79.0 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 48/161 (29%), Positives = 79/161 (49%)
Query: 18 GHTGDVMSLSLA-PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GH V +++ P +G+ D + KLW + G C TF GH ++I ++F P
Sbjct: 132 GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTL 191
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
ATGS D T +L+DI++ +E+ + H I S++F+ SG ++ G D VW++
Sbjct: 192 VATGSMDTTAKLWDIQSGEEVFTLTGHS---AEIISLSFNTSGNRIITGSFDHTVTVWEA 248
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L GH +S D + TGS D ++W+
Sbjct: 249 DTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWD 289
Score = 203 (76.5 bits), Expect = 9.5e-16, P = 9.5e-16
Identities = 48/160 (30%), Positives = 73/160 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH ++ S D ++G+ D + KLWD +G C T GH+ +I F G
Sbjct: 259 GHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLI 318
Query: 78 ATGSDDATCRLFDIRADQELA--MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
AT S D T R+F A +E + H+ I+ ++F+ G LL G D +WD+
Sbjct: 319 ATASADGTARIFSA-ATRECVTKLEGHEG---EISKISFNPQGNRLLTGSSDKTARIWDA 374
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ +L GH + + G + TGS D+ RIW
Sbjct: 375 QTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 186 (70.5 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 45/160 (28%), Positives = 72/160 (45%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFF-PNGWAF 77
H + +++L F++G+ D + KLWD G T GH + + A+ F P G
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKI 150
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
ATGS D TC+L+ + + + H I+C ++F+ L+ G D +WD
Sbjct: 151 ATGSFDKTCKLWSVETGKCYHTFRGHTAEIVC----LSFNPQSTLVATGSMDTTAKLWDI 206
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
E L GH + L G + TGS+D + +W
Sbjct: 207 QSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVW 246
Score = 172 (65.6 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 43/161 (26%), Positives = 76/161 (47%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH+ +++SLS ++G+ D + +W+ G T GH ++I++ F +
Sbjct: 216 TGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSL 275
Query: 77 FATGSDDATCRLFD-IRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
TGS D TC+L+D + + HD+ I + S F +G+L+ D ++ +
Sbjct: 276 ILTGSMDKTCKLWDAVNGKCVATLTGHDDEI--LDS-CFDYTGKLIATASADGTARIFSA 332
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
E L GH+ +S + G + TGS D RIW+
Sbjct: 333 ATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWD 373
Score = 145 (56.1 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 31/118 (26%), Positives = 56/118 (47%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH +++ + + + D +A+++ C GHE +I+ ++F P G
Sbjct: 300 TGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNR 359
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
TGS D T R++D + Q L + H + I S AF+ G +++ G D C +W
Sbjct: 360 LLTGSSDKTARIWDAQTGQCLQVLEGHTD---EIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 115 (45.5 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 106 ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTED-GMAVA 164
I +T+VA ++SG + G D C +WD+ E L GH N V + G +A
Sbjct: 92 ILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIA 151
Query: 165 TGSWDSFLRIWN 176
TGS+D ++W+
Sbjct: 152 TGSFDKTCKLWS 163
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 205 (77.2 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 49/162 (30%), Positives = 82/162 (50%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH + ++ + D R VS + D + KLWD+ GS +T GH + V F P
Sbjct: 68 TGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNM 127
Query: 77 FATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+GS D T R++D+ + L + +H + +T+V F+R G L+++ D C +WDS
Sbjct: 128 IVSGSFDETVRIWDVTTGKCLKVLPAHSD---PVTAVDFNRDGSLIVSSSYDGLCRIWDS 184
Query: 136 MKTERAGILAGHDNR-VSCLGVTEDGMAVATGSWDSFLRIWN 176
L +N VS + + +G + G+ D+ LR+WN
Sbjct: 185 GTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWN 226
Score = 183 (69.5 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 43/162 (26%), Positives = 72/162 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT ++ P VSG+ D + ++WD+ G C + P H + AV F +G
Sbjct: 111 GHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLI 170
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+ S D CR++D + D ++ V FS +G+ +L G D +W+
Sbjct: 171 VSSSYDGLCRIWDSGTGHCVKTLIDDENP-PVSFVRFSPNGKFILVGTLDNTLRLWNISS 229
Query: 138 TERAGILAGHDNRVSCLG----VTEDGMAVATGSWDSFLRIW 175
+ GH N C+ VT +G + +GS D+ + +W
Sbjct: 230 AKFLKTYTGHVNAQYCISSAFSVT-NGKRIVSGSEDNCVHMW 270
Score = 166 (63.5 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 49/161 (30%), Positives = 80/161 (49%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD-INAVTFFPNGWAF 77
H+ V ++ D VS + D ++WD G C +T E+ ++ V F PNG
Sbjct: 154 HSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFI 213
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFS-RSGRLLLAGYDDFNC-NVWD 134
G+ D T RL++I + + L Y+ H N I+S AFS +G+ +++G +D NC ++W+
Sbjct: 214 LVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISS-AFSVTNGKRIVSGSED-NCVHMWE 271
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ L GH V + +A+GS D +RIW
Sbjct: 272 LNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 162 (62.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 43/171 (25%), Positives = 75/171 (43%)
Query: 13 SPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIR---DGSCK--QTFPGHESDINA 67
S + H V S+ + D R S + D + + + I D + Q F GHE+ I+
Sbjct: 17 SQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISD 76
Query: 68 VTFFPNGWAFATGSDDATCRLFDIRADQEL-AMYSHDNI-ICGITSVAFSRSGRLLLAGY 125
V F + + SDD T +L+D+ + + H N C V F+ ++++G
Sbjct: 77 VAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFC----VNFNPQSNMIVSGS 132
Query: 126 DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D +WD + +L H + V+ + DG + + S+D RIW+
Sbjct: 133 FDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD 183
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 213 (80.0 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 52/161 (32%), Positives = 85/161 (52%)
Query: 20 TGD--VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
TGD + S+ +PD + +GA D ++WDI + + F GHE DI ++ F +G
Sbjct: 344 TGDLYIRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTI 403
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
A+GS D T RL+DI L +++ ++ G+T+VA S + + AG D + VWD +
Sbjct: 404 ASGSGDRTVRLWDIENGTALTVFTIED---GVTTVAISPDTKYVAAGSLDKSVRVWDLTQ 460
Query: 138 ---TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
ER GH + V + + +G + TGS D +++W
Sbjct: 461 GCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLW 501
Score = 167 (63.8 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 51/173 (29%), Positives = 82/173 (47%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH D+ SL A D RT SG+ D + +LWDI +G+ F E + V P+
Sbjct: 385 AGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFT-IEDGVTTVAISPDTKY 443
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD- 134
A GS D + R++D+ + + D + SVAFS +GR L+ G D +W+
Sbjct: 444 VAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWEL 503
Query: 135 -----SMKTE--RAG----ILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+M+ + + G GH + V + +T D V +GS D ++ W+
Sbjct: 504 ATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWD 556
Score = 163 (62.4 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 46/167 (27%), Positives = 77/167 (46%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF--P-GHESDINAVTFFPNGWAFAT 79
V +++++PD + +G+ D S ++WD+ G + P GH+ + +V F PNG T
Sbjct: 432 VTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVT 491
Query: 80 GSDDATCRLFDIRADQ-ELAMYSHDNIIC-----G----ITSVAFSRSGRLLLAGYDDFN 129
GS D T +L+++ + + C G + SVA + + +++G D
Sbjct: 492 GSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRG 551
Query: 130 CNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
WD +L GH N V + + G ATGS D RIW+
Sbjct: 552 VQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSGDMRARIWS 598
Score = 156 (60.0 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 40/121 (33%), Positives = 62/121 (51%)
Query: 61 HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNI-ICG---ITSVAFSR 116
HES + V F +G ATG + + ++FD+ +++ + DN G I SV FS
Sbjct: 298 HESVVCCVRFSADGKYVATGCN-RSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSP 356
Query: 117 SGRLLLAGYDDFNCNVWD-SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
G+ L G +D VWD + +T R AGH+ + L DG +A+GS D +R+W
Sbjct: 357 DGKYLATGAEDKQIRVWDITTRTIRIQF-AGHEQDIYSLDFARDGRTIASGSGDRTVRLW 415
Query: 176 N 176
+
Sbjct: 416 D 416
Score = 139 (54.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 30/82 (36%), Positives = 45/82 (54%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V+S++L PD + +SG+ D + WD R GS + GH++ + +V P G F
Sbjct: 526 GHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFF 585
Query: 78 ATGSDDATCRLFDI-RADQELA 98
ATGS D R++ R D +A
Sbjct: 586 ATGSGDMRARIWSYTRMDNRMA 607
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 211 (79.3 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 58/172 (33%), Positives = 92/172 (53%)
Query: 13 SPAASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFF 71
S + +GH +++ S +P T VSG+ D++A++WD G+ T GH S + AV++
Sbjct: 141 SASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYS 200
Query: 72 PNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS-----RSGRLLLAGYD 126
PNG ATGS D T R++D + Q L ++ ITS+A+ +SG LA
Sbjct: 201 PNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKW-ITSLAWEPYHLQQSGHPRLASAS 259
Query: 127 -DFNCNVWDSMKTERAGI-LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D +WD + ++RA I L+GH V+C+ G + T S D +++WN
Sbjct: 260 KDSTVRIWDVI-SKRADIVLSGHKGSVTCVRWGGTGK-IYTSSHDRTIKVWN 309
Score = 136 (52.9 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 40/143 (27%), Positives = 66/143 (46%)
Query: 36 VSGACDASAKLWDIRDGSCKQT--FPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA 93
VS + D + LWD + S K GH+ ++N VTF P+ A+ D +L++ R
Sbjct: 378 VSASDDFTMYLWD-PESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRD 436
Query: 94 DQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVS 152
+ + + H + + FS RLL++ D VW+ + + L GH + V
Sbjct: 437 GKFITTLRGH---VGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVF 493
Query: 153 CLGVTEDGMAVATGSWDSFLRIW 175
+ + DG V +G D +RIW
Sbjct: 494 AVDWSPDGQKVGSGGKDKAIRIW 516
Score = 129 (50.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH G V + D R VS + D + K+W++R G + PGH+ ++ AV + P+G
Sbjct: 445 GHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKV 504
Query: 78 ATGSDDATCRLF 89
+G D R++
Sbjct: 505 GSGGKDKAIRIW 516
Score = 122 (48.0 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 35/131 (26%), Positives = 63/131 (48%)
Query: 54 CKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSV 112
C + GH I A +F P + +GS D+T R++D D +++ + +V
Sbjct: 140 CSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWD--CDTGTPLHTLKGHTSWVLAV 197
Query: 113 AFSRSGRLLLAGYDDFNCNVWDSMKTERAGI-LAGHDNRVSCLG-----VTEDGMA-VAT 165
++S +G ++ G D +WD+ K + G L GH ++ L + + G +A+
Sbjct: 198 SYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLAS 257
Query: 166 GSWDSFLRIWN 176
S DS +RIW+
Sbjct: 258 ASKDSTVRIWD 268
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 35/161 (21%), Positives = 68/161 (42%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
SGH G V + + + S D + K+W+ + G+ QT H +N + + +
Sbjct: 279 SGHKGSVTCVRWGGTGKIYTSSH-DRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTD-FI 336
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
T D T ++ + AD+ I + + L++ DDF +WD
Sbjct: 337 LRTAYHDHTGKVPESDADKVAMAKKRFEKAATINNKIVEK----LVSASDDFTMYLWDPE 392
Query: 137 KTER-AGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + L GH V+ + + D +A+ +D+ +++WN
Sbjct: 393 SSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWN 433
>MGI|MGI:1341200 [details] [associations]
symbol:Pwp2 "PWP2 periodic tryptophan protein homolog
(yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1341200 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 CTD:5822 HOVERGEN:HBG030681
OrthoDB:EOG4R7V93 EMBL:AK088254 EMBL:AK088983 IPI:IPI00469755
RefSeq:NP_083822.1 RefSeq:XP_003946476.1 UniGene:Mm.103522
ProteinModelPortal:Q8BU03 SMR:Q8BU03 STRING:Q8BU03
PhosphoSite:Q8BU03 PRIDE:Q8BU03 Ensembl:ENSMUST00000042556
GeneID:110816 KEGG:mmu:110816 InParanoid:Q8BU03 ChiTaRS:PWP2
NextBio:364713 Bgee:Q8BU03 CleanEx:MM_PWP2 Genevestigator:Q8BU03
GermOnline:ENSMUSG00000032834 Uniprot:Q8BU03
Length = 919
Score = 215 (80.7 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 52/161 (32%), Positives = 78/161 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH +++L+ +PD + V+G D K+W+ G C T H S + VTF G
Sbjct: 371 GHFNSMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTLTEHSSGVTGVTFTTTGHVI 430
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAG-YDDFNCNVWDSM 136
T S D T R FD+ + ++ + VA SG ++ AG D F VW SM
Sbjct: 431 VTSSLDGTVRAFDLHRYRNFRTFTSPRPT-QFSCVAVDSSGEIVSAGAQDSFEIFVW-SM 488
Query: 137 KTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+T R +L+GH+ VS L +A+ SWD +R+W+
Sbjct: 489 QTGRLLDVLSGHEGPVSGLCFNPMKSILASASWDKTVRLWD 529
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 213 (80.0 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 55/160 (34%), Positives = 77/160 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V +P FVSG D A+LW + F GH +D+N F PN
Sbjct: 581 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV 640
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
ATGS D T RL+D+ + +++ H I +T FS +GR L G D +WD
Sbjct: 641 ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLT---FSPNGRFLATGATDGRVLLWDIG 697
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
G L GH + V L + DG +A+GS D+ +R+W+
Sbjct: 698 HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 737
Score = 203 (76.5 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 41/122 (33%), Positives = 67/122 (54%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH DV P+ +G+ D + +LWD+ +G+C + F GH+ I+++TF PNG
Sbjct: 622 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 681
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
ATG+ D L+DI + + H + +C S+ FSR G +L +G D +WD+
Sbjct: 682 LATGATDGRVLLWDIGHGLMVGELKGHTDTVC---SLRFSRDGEILASGSMDNTVRLWDA 738
Query: 136 MK 137
+K
Sbjct: 739 IK 740
Score = 177 (67.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 39/159 (24%), Positives = 70/159 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+G V S +PD +S + D + +LW ++ +C + GH + F P G+ F
Sbjct: 539 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF 598
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+G D RL+ Q L +++ + + F + + G D +WD +
Sbjct: 599 VSGGHDRVARLWATDHYQPLRIFAGH--LADVNCTRFHPNSNYVATGSADRTVRLWDVLN 656
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
I GH + L + +G +ATG+ D + +W+
Sbjct: 657 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 695
Score = 123 (48.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/152 (25%), Positives = 64/152 (42%)
Query: 25 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA 84
S+ A D+ + D ++ D + S + GH + +F P+ + S+D
Sbjct: 504 SVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDG 563
Query: 85 TCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL 144
T RL+ ++ L Y N + FS G ++G D +W + + I
Sbjct: 564 TVRLWSLQTFTCLVGYKGHNY--PVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 621
Query: 145 AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
AGH V+C + VATGS D +R+W+
Sbjct: 622 AGHLADVNCTRFHPNSNYVATGSADRTVRLWD 653
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 213 (80.0 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 55/160 (34%), Positives = 77/160 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V +P FVSG D A+LW + F GH +D+N F PN
Sbjct: 583 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV 642
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
ATGS D T RL+D+ + +++ H I +T FS +GR L G D +WD
Sbjct: 643 ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLT---FSPNGRFLATGATDGRVLLWDIG 699
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
G L GH + V L + DG +A+GS D+ +R+W+
Sbjct: 700 HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 203 (76.5 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 41/122 (33%), Positives = 67/122 (54%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH DV P+ +G+ D + +LWD+ +G+C + F GH+ I+++TF PNG
Sbjct: 624 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 683
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
ATG+ D L+DI + + H + +C S+ FSR G +L +G D +WD+
Sbjct: 684 LATGATDGRVLLWDIGHGLMVGELKGHTDTVC---SLRFSRDGEILASGSMDNTVRLWDA 740
Query: 136 MK 137
+K
Sbjct: 741 VK 742
Score = 177 (67.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 39/159 (24%), Positives = 70/159 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+G V S +PD +S + D + +LW ++ +C + GH + F P G+ F
Sbjct: 541 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF 600
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+G D RL+ Q L +++ + + F + + G D +WD +
Sbjct: 601 VSGGHDRVARLWATDHYQPLRIFAGH--LADVNCTRFHPNSNYVATGSADRTVRLWDVLN 658
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
I GH + L + +G +ATG+ D + +W+
Sbjct: 659 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 697
Score = 123 (48.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/152 (25%), Positives = 64/152 (42%)
Query: 25 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA 84
S+ A D+ + D ++ D + S + GH + +F P+ + S+D
Sbjct: 506 SVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDG 565
Query: 85 TCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL 144
T RL+ ++ L Y N + FS G ++G D +W + + I
Sbjct: 566 TVRLWSLQTFTCLVGYKGHNY--PVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 623
Query: 145 AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
AGH V+C + VATGS D +R+W+
Sbjct: 624 AGHLADVNCTRFHPNSNYVATGSADRTVRLWD 655
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 213 (80.0 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 55/160 (34%), Positives = 77/160 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V +P FVSG D A+LW + F GH +D+N F PN
Sbjct: 583 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV 642
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
ATGS D T RL+D+ + +++ H I +T FS +GR L G D +WD
Sbjct: 643 ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLT---FSPNGRFLATGATDGRVLLWDIG 699
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
G L GH + V L + DG +A+GS D+ +R+W+
Sbjct: 700 HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 203 (76.5 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 41/122 (33%), Positives = 67/122 (54%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH DV P+ +G+ D + +LWD+ +G+C + F GH+ I+++TF PNG
Sbjct: 624 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 683
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
ATG+ D L+DI + + H + +C S+ FSR G +L +G D +WD+
Sbjct: 684 LATGATDGRVLLWDIGHGLMVGELKGHTDTVC---SLRFSRDGEILASGSMDNTVRLWDA 740
Query: 136 MK 137
+K
Sbjct: 741 IK 742
Score = 177 (67.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 39/159 (24%), Positives = 70/159 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+G V S +PD +S + D + +LW ++ +C + GH + F P G+ F
Sbjct: 541 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF 600
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+G D RL+ Q L +++ + + F + + G D +WD +
Sbjct: 601 VSGGHDRVARLWATDHYQPLRIFAGH--LADVNCTRFHPNSNYVATGSADRTVRLWDVLN 658
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
I GH + L + +G +ATG+ D + +W+
Sbjct: 659 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 697
Score = 123 (48.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/152 (25%), Positives = 64/152 (42%)
Query: 25 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA 84
S+ A D+ + D ++ D + S + GH + +F P+ + S+D
Sbjct: 506 SVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDG 565
Query: 85 TCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL 144
T RL+ ++ L Y N + FS G ++G D +W + + I
Sbjct: 566 TVRLWSLQTFTCLVGYKGHNY--PVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 623
Query: 145 AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
AGH V+C + VATGS D +R+W+
Sbjct: 624 AGHLADVNCTRFHPNSNYVATGSADRTVRLWD 655
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 213 (80.0 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 55/160 (34%), Positives = 77/160 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V +P FVSG D A+LW + F GH +D+N F PN
Sbjct: 584 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV 643
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
ATGS D T RL+D+ + +++ H I +T FS +GR L G D +WD
Sbjct: 644 ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLT---FSPNGRFLATGATDGRVLLWDIG 700
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
G L GH + V L + DG +A+GS D+ +R+W+
Sbjct: 701 HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 203 (76.5 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 41/122 (33%), Positives = 67/122 (54%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH DV P+ +G+ D + +LWD+ +G+C + F GH+ I+++TF PNG
Sbjct: 625 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 684
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
ATG+ D L+DI + + H + +C S+ FSR G +L +G D +WD+
Sbjct: 685 LATGATDGRVLLWDIGHGLMVGELKGHTDTVC---SLRFSRDGEILASGSMDNTVRLWDA 741
Query: 136 MK 137
+K
Sbjct: 742 VK 743
Score = 177 (67.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 39/159 (24%), Positives = 70/159 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+G V S +PD +S + D + +LW ++ +C + GH + F P G+ F
Sbjct: 542 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF 601
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+G D RL+ Q L +++ + + F + + G D +WD +
Sbjct: 602 VSGGHDRVARLWATDHYQPLRIFAGH--LADVNCTRFHPNSNYVATGSADRTVRLWDVLN 659
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
I GH + L + +G +ATG+ D + +W+
Sbjct: 660 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 698
Score = 123 (48.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/152 (25%), Positives = 64/152 (42%)
Query: 25 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA 84
S+ A D+ + D ++ D + S + GH + +F P+ + S+D
Sbjct: 507 SVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDG 566
Query: 85 TCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL 144
T RL+ ++ L Y N + FS G ++G D +W + + I
Sbjct: 567 TVRLWSLQTFTCLVGYKGHNY--PVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 624
Query: 145 AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
AGH V+C + VATGS D +R+W+
Sbjct: 625 AGHLADVNCTRFHPNSNYVATGSADRTVRLWD 656
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 206 (77.6 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 51/163 (31%), Positives = 77/163 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V + P VSG+ D S ++WD++ G C +T P H ++AV+F +G
Sbjct: 169 GHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLI 228
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
A+GS D R++D Q + D + V FS +G+ +LA D +WD K
Sbjct: 229 ASGSYDGLVRIWDTANGQCIKTLVDDENP-PVAFVKFSPNGKYILASNLDSTLKLWDFSK 287
Query: 138 TERAGILAGHDNRVSCL----GVTEDGMAVATGSWDSFLRIWN 176
+ GH+N C+ VT G + +GS D + IWN
Sbjct: 288 GKTLKQYTGHENSKYCIFANFSVT-GGKWIISGSEDCKIYIWN 329
Score = 193 (73.0 bits), Expect = 8.9e-15, P = 8.9e-15
Identities = 43/162 (26%), Positives = 81/162 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT + S +P + + + D + K+W++ C++T GH+ +N + + +
Sbjct: 85 GHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCV 144
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDN-IICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+ SDD T ++F+I + + H+N + C F+ L+++G D + +WD
Sbjct: 145 VSASDDKTLKIFEIVTSRMTKTLKGHNNYVFC----CNFNPQSSLVVSGSFDESVRIWD- 199
Query: 136 MKTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+KT L H + VS + DG +A+GS+D +RIW+
Sbjct: 200 VKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
Score = 152 (58.6 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 38/162 (23%), Positives = 80/162 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH V ++ + D R VS + D + K+++I +T GH + + F P
Sbjct: 126 TGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSL 185
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+GS D + R++D++ + + +H + +++V+F+R G L+ +G D +WD+
Sbjct: 186 VVSGSFDESVRIWDVKTGMCIKTLPAHSD---PVSAVSFNRDGSLIASGSYDGLVRIWDT 242
Query: 136 MKTERAGILAGHDNR-VSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L +N V+ + + +G + + DS L++W+
Sbjct: 243 ANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
Score = 148 (57.2 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 41/162 (25%), Positives = 73/162 (45%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD-INAVTFFPNGWAF 77
H+ V ++S D SG+ D ++WD +G C +T E+ + V F PNG
Sbjct: 212 HSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYI 271
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+ D+T +L+D + L Y+ H+N C + + + G+ +++G +D +W+
Sbjct: 272 LASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVT-GGKWIISGSEDCKIYIWNL 330
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSW--DSFLRIW 175
E L GH V +A+G+ D+ + IW
Sbjct: 331 QTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 139 (54.0 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 31/120 (25%), Positives = 56/120 (46%)
Query: 57 TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR 116
T GH I++ F P G T S D T +++++ D + + G+ +A+S
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNM--DHMICERTLTGHKLGVNDIAWSS 139
Query: 117 SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
R +++ DD +++ + + L GH+N V C V +GS+D +RIW+
Sbjct: 140 DSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWD 199
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 206 (77.6 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 51/163 (31%), Positives = 77/163 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V + P VSG+ D S ++WD++ G C +T P H ++AV+F +G
Sbjct: 169 GHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLI 228
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
A+GS D R++D Q + D + V FS +G+ +LA D +WD K
Sbjct: 229 ASGSYDGLVRIWDTANGQCIKTLVDDENP-PVAFVKFSPNGKYILASNLDSTLKLWDFSK 287
Query: 138 TERAGILAGHDNRVSCL----GVTEDGMAVATGSWDSFLRIWN 176
+ GH+N C+ VT G + +GS D + IWN
Sbjct: 288 GKTLKQYTGHENSKYCIFANFSVT-GGKWIISGSEDCKIYIWN 329
Score = 193 (73.0 bits), Expect = 8.9e-15, P = 8.9e-15
Identities = 43/162 (26%), Positives = 81/162 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT + S +P + + + D + K+W++ C++T GH+ +N + + +
Sbjct: 85 GHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCV 144
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDN-IICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+ SDD T ++F+I + + H+N + C F+ L+++G D + +WD
Sbjct: 145 VSASDDKTLKIFEIVTSRMTKTLKGHNNYVFC----CNFNPQSSLVVSGSFDESVRIWD- 199
Query: 136 MKTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+KT L H + VS + DG +A+GS+D +RIW+
Sbjct: 200 VKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
Score = 152 (58.6 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 38/162 (23%), Positives = 80/162 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH V ++ + D R VS + D + K+++I +T GH + + F P
Sbjct: 126 TGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSL 185
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+GS D + R++D++ + + +H + +++V+F+R G L+ +G D +WD+
Sbjct: 186 VVSGSFDESVRIWDVKTGMCIKTLPAHSD---PVSAVSFNRDGSLIASGSYDGLVRIWDT 242
Query: 136 MKTERAGILAGHDNR-VSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L +N V+ + + +G + + DS L++W+
Sbjct: 243 ANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
Score = 148 (57.2 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 41/162 (25%), Positives = 73/162 (45%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD-INAVTFFPNGWAF 77
H+ V ++S D SG+ D ++WD +G C +T E+ + V F PNG
Sbjct: 212 HSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYI 271
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+ D+T +L+D + L Y+ H+N C + + + G+ +++G +D +W+
Sbjct: 272 LASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVT-GGKWIISGSEDCKIYIWNL 330
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSW--DSFLRIW 175
E L GH V +A+G+ D+ + IW
Sbjct: 331 QTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 139 (54.0 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 31/120 (25%), Positives = 56/120 (46%)
Query: 57 TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR 116
T GH I++ F P G T S D T +++++ D + + G+ +A+S
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNM--DHMICERTLTGHKLGVNDIAWSS 139
Query: 117 SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
R +++ DD +++ + + L GH+N V C V +GS+D +RIW+
Sbjct: 140 DSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWD 199
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 207 (77.9 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 49/161 (30%), Positives = 78/161 (48%)
Query: 18 GHTGDVMSLSLA-PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GH V +++ P +G+ D + KLW G C TF GH ++I ++F P
Sbjct: 132 GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTV 191
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
ATGS D T +L+DI++ +E+ + H + I S++F SG ++ G D VWD+
Sbjct: 192 VATGSMDTTAKLWDIQSGEEVVTLTGH---LAEIISLSFDTSGDRIITGSFDHTVVVWDA 248
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L GH +S + D + TGS D +W+
Sbjct: 249 STGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWD 289
Score = 196 (74.1 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 45/159 (28%), Positives = 71/159 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH ++ S + D ++G+ D + LWD G C T GH+ +I F G
Sbjct: 259 GHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLI 318
Query: 78 ATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
AT S D T R+++ + + + H+ I+ ++F+ G LL G D +WD
Sbjct: 319 ATASADGTARVYNATTRKCITKLEGHEG---EISKISFNPQGNRLLTGSSDKTARIWDVQ 375
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ +L GH + + G V TGS D+ RIW
Sbjct: 376 TGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 172 (65.6 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 45/161 (27%), Positives = 78/161 (48%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH +++SLS ++G+ D + +WD G T GH ++I++ F +
Sbjct: 216 TGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSL 275
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
TGS D TC L+D + + +A + HD+ I + S F +G+L+ D V+++
Sbjct: 276 ILTGSMDKTCMLWDATSGKCVATLTGHDDEI--LDS-CFDYTGKLIATASADGTARVYNA 332
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L GH+ +S + G + TGS D RIW+
Sbjct: 333 TTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWD 373
Score = 170 (64.9 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 40/143 (27%), Positives = 65/143 (45%)
Query: 35 FVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFF-PNGWAFATGSDDATCRLFDIRA 93
F++G+ D + K+WD G T GH + + A+ F P G ATGS D TC+L+ A
Sbjct: 107 FITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWS--A 164
Query: 94 DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSC 153
+ ++ I ++F+ ++ G D +WD E L GH +
Sbjct: 165 ETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIIS 224
Query: 154 LGVTEDGMAVATGSWDSFLRIWN 176
L G + TGS+D + +W+
Sbjct: 225 LSFDTSGDRIITGSFDHTVVVWD 247
Score = 151 (58.2 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 31/118 (26%), Positives = 59/118 (50%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH +++ + + + D +A++++ C GHE +I+ ++F P G
Sbjct: 300 TGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNR 359
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
TGS D T R++D++ Q L + H + I S AF+ G +++ G D +C +W
Sbjct: 360 LLTGSSDKTARIWDVQTGQCLQVLEGHTD---EIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 137 (53.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 32/105 (30%), Positives = 50/105 (47%)
Query: 74 GWAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRS-GRLLLAGYDDFNCN 131
G F TGS D TC+++D + +EL + H N++ I AF+ G + G D C
Sbjct: 104 GSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAI---AFNNPYGDKIATGSFDKTCK 160
Query: 132 VWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+W + + GH + CL VATGS D+ ++W+
Sbjct: 161 LWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWD 205
Score = 115 (45.5 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 106 ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTED-GMAVA 164
I +T+VA +++G + G D C VWD+ E L GH N V + G +A
Sbjct: 92 ILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIA 151
Query: 165 TGSWDSFLRIWN 176
TGS+D ++W+
Sbjct: 152 TGSFDKTCKLWS 163
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 47/163 (28%), Positives = 77/163 (47%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH G V S +PD R S + D S +LWD+ C GH+ + V+F P+
Sbjct: 65 AGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQ 124
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD- 134
A+G D ++++++ + + + H + I S FS + L G D ++WD
Sbjct: 125 LASGGWDKRAIVWEVQSGRRVHLLVGHCD---SIQSSDFSPTSDSLATGSWDSTVHIWDL 181
Query: 135 --SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
S L GH +SCL + G+ +A+GSWD + +W
Sbjct: 182 RASTPVVSYHNLEGHTGNISCLCYSASGL-LASGSWDKTICVW 223
Score = 197 (74.4 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 44/159 (27%), Positives = 75/159 (47%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
H G+V + +PD RT ++ + D +W + G GH + + F P+G A
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+ S D + RL+D+ + L + H + +V+FS + L +G D VW+
Sbjct: 85 SSSSDHSIRLWDVARSKCLHVLKGHQR---SVETVSFSPDSKQLASGGWDKRAIVWEVQS 141
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
R +L GH + + + ++ATGSWDS + IW+
Sbjct: 142 GRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWD 180
Score = 186 (70.5 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 44/160 (27%), Positives = 75/160 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V ++S +PD + SG D A +W+++ G GH I + F P +
Sbjct: 108 GHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSL 167
Query: 78 ATGSDDATCRLFDIRADQELAMYSH-DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
ATGS D+T ++D+RA + Y + + I+ + +S SG L +D C VW
Sbjct: 168 ATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASGLLASGSWDKTIC-VWKPT 226
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH V+ L + D + +A+ + +++W+
Sbjct: 227 TNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWD 266
Score = 111 (44.1 bits), Expect = 0.00015, P = 0.00015
Identities = 40/156 (25%), Positives = 70/156 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF---PGHESDINAVTFFPNG 74
GH + S +P + +G+ D++ +WD+R + ++ GH +I+ + + +G
Sbjct: 150 GHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG 209
Query: 75 WAFATGSDDAT-CRLFDIRADQELAMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNV 132
A+GS D T C + L + H + S+AFS +L AGY V
Sbjct: 210 -LLASGSWDKTICVWKPTTNNLPLQLKGHT---IWVNSLAFSPDELKLASAGYSR-TVKV 264
Query: 133 WDSMKTERAGILAGH-DNRVSCLGVTEDGMAVATGS 167
WD + + L G D +C+ T DG + +G+
Sbjct: 265 WDCLTGKCLETLKGMLDVAHACI-FTPDGKLLVSGA 299
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 205 (77.2 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 50/163 (30%), Positives = 79/163 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V + P VSG+ D S ++WD+R G C +T P H ++AV+F +G
Sbjct: 161 GHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLI 220
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+GS D R++D A+ + D+ + V FS +G+ +L+ D +WD K
Sbjct: 221 TSGSYDGLVRIWDT-ANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGK 279
Query: 138 TERAGILAGHDNRVSCL----GVTEDGMAVATGSWDSFLRIWN 176
+ GH+N C+ VT G + +GS D + +WN
Sbjct: 280 GKTLKQYQGHENNKYCIFANFSVT-GGKWIISGSEDCKIYVWN 321
Score = 196 (74.1 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 40/161 (24%), Positives = 78/161 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT + ++ +P + + + D + K+W++ D SC++T GH+ +N + + +
Sbjct: 77 GHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSI 136
Query: 78 ATGSDDATCRLFDI-RADQELAMYSHDN-IICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
T SDD T +++++ + H N + C F+ L+++G D + +WD
Sbjct: 137 VTASDDKTLKIYEVPTVKMAKTLKGHTNYVFC----CNFNPQSSLVVSGSFDESVRIWDV 192
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L H + VS + DG + +GS+D +RIW+
Sbjct: 193 RTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWD 233
Score = 151 (58.2 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 43/162 (26%), Positives = 73/162 (45%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD-INAVTFFPNGWAF 77
H+ V ++S D SG+ D ++WD +G C +T E+ + V F PNG
Sbjct: 204 HSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYI 263
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+ + D T +L+D + L Y H+N C + + + G+ +++G +D VW+
Sbjct: 264 LSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVT-GGKWIISGSEDCKIYVWNL 322
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSW--DSFLRIW 175
E L GH V +A+G+ D+ +RIW
Sbjct: 323 QTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
Score = 146 (56.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 35/162 (21%), Positives = 81/162 (50%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH V + + D ++ V+ + D + K++++ +T GH + + F P
Sbjct: 118 TGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSL 177
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+GS D + R++D+R + + +H + +++V+F+R G L+ +G D +WD+
Sbjct: 178 VVSGSFDESVRIWDVRTGMCVKTLPAHSD---PVSAVSFNRDGSLITSGSYDGLVRIWDT 234
Query: 136 MKTERAGILAGHDNR-VSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L +N V+ + + +G + + + D+ L++W+
Sbjct: 235 ANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWD 276
Score = 139 (54.0 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 34/121 (28%), Positives = 54/121 (44%)
Query: 57 TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR-ADQELAMYSHDNIICGITSVAFS 115
T GH I+AV F P G T S D T +++++ E + H G+ A+S
Sbjct: 74 TIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHK---LGVNDFAWS 130
Query: 116 RSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ ++ DD +++ + A L GH N V C V +GS+D +RIW
Sbjct: 131 ADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIW 190
Query: 176 N 176
+
Sbjct: 191 D 191
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 211 (79.3 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 54/163 (33%), Positives = 82/163 (50%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD 82
+ S+ +PD + +GA D ++WDI + GHE DI ++ +FP+G +GS
Sbjct: 446 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG 505
Query: 83 DATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDS---MK 137
D T R++D+R Q L + D G+T+VA S G+ + AG D VWDS
Sbjct: 506 DRTVRIWDLRTGQCSLTLSIED----GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL 561
Query: 138 TERAGIL----AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
ER GH + V + T DG +V +GS D +++WN
Sbjct: 562 VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWN 604
Score = 137 (53.3 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 40/147 (27%), Positives = 78/147 (53%)
Query: 34 TFVSGACDASAKLW-DIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR 92
T + A ++A+L D+ + + + P + I +V F P+G ATG++D R++DI
Sbjct: 415 TITTTAMTSAAELAKDVENLNTSSS-PSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIE 473
Query: 93 ADQELAMY--SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNR 150
++++ M H+ I S+ + SG L++G D +WD ++T + + ++
Sbjct: 474 -NRKIVMILQGHEQ---DIYSLDYFPSGDKLVSGSGDRTVRIWD-LRTGQCSLTLSIEDG 528
Query: 151 VSCLGVTE-DGMAVATGSWDSFLRIWN 176
V+ + V+ DG +A GS D +R+W+
Sbjct: 529 VTTVAVSPGDGKYIAAGSLDRAVRVWD 555
Score = 128 (50.1 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 36/123 (29%), Positives = 57/123 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP-NGWA 76
GH D+ SL P VSG+ D + ++WD+R G C T E + V P +G
Sbjct: 483 GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL-SIEDGVTTVAVSPGDGKY 541
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNII-CG----ITSVAFSRSGRLLLAGYDDFNCN 131
A GS D R++D + +N G + SV F+R G+ +++G D +
Sbjct: 542 IAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVK 601
Query: 132 VWD 134
+W+
Sbjct: 602 LWN 604
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 204 (76.9 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 51/161 (31%), Positives = 80/161 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
SGH G ++ L + D +T S + D + WDI G + + GHE IN+V G
Sbjct: 106 SGHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQE 165
Query: 77 F-ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+ SDD T ++D R +E Y + IT+VA S +G + +G D +VWD
Sbjct: 166 MLVSASDDGTMGIWDPR-QKEAIDYLETEL--PITAVAQSEAGNEVFSGGIDNAIHVWDI 222
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K +AGH + ++ L V+ D + + S+DS +R W+
Sbjct: 223 RKKAIVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWD 263
Score = 156 (60.0 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 42/164 (25%), Positives = 78/164 (47%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ--TFPGHESDINAVTFFPNG 74
+GH+G+V ++ P + SG+ D S LW+ G C+ GH+ I + + +
Sbjct: 63 TGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTY-GQCENYGILSGHKGAILDLQWSRDS 121
Query: 75 WAFATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGR-LLLAGYDDFNCNV 132
+ S D T +DI + Q + Y H+ +I SV S+ G+ +L++ DD +
Sbjct: 122 KTIFSASADMTLASWDIESGQRIRRYIGHEEVI---NSVEISKRGQEMLVSASDDGTMGI 178
Query: 133 WDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
WD + E L + ++ + +E G V +G D+ + +W+
Sbjct: 179 WDPRQKEAIDYLET-ELPITAVAQSEAGNEVFSGGIDNAIHVWD 221
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 208 (78.3 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 49/160 (30%), Positives = 81/160 (50%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
SGH G V +L++ PD + F SGA D + K+WD+ G + T GH S + + P
Sbjct: 198 SGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVSPRHPY 257
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ ++D + +D+ ++ + Y H ++ G+ ++A + +L+ G D VWD
Sbjct: 258 LFSCAEDKMVKCWDLETNKVIRHY-HGHL-SGVYTLALHPTLDVLVTGGRDGVARVWDMR 315
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+L+GH VS L E V TGS DS +R+W+
Sbjct: 316 TRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWD 355
Score = 123 (48.4 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 35/159 (22%), Positives = 70/159 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V +L+L P + V+G D A++WD+R S GH ++ +
Sbjct: 283 GHLSGVYTLALHPTLDVLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVSELVCQEADPQV 342
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
TGS D+T R++D+ A + + + +H G+ ++A + A + W +
Sbjct: 343 ITGSLDSTVRMWDLAAGKTMGVLTHHKK--GVRALA-THPTEFTFASGSAGSIKQWKCPE 399
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
GH++ ++ L V + + + G+ + + W+
Sbjct: 400 GAFMQNFEGHNSIINTLSVNDQNVFFS-GADNGSMSFWD 437
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 209 (78.6 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 50/160 (31%), Positives = 79/160 (49%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG V + ++ R VSG+ D + K+W DGS T GH S + + G
Sbjct: 294 GHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GSIL 351
Query: 78 ATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
TGS D T R++D+ + + LA ++ H + V F G +++G DF +W++
Sbjct: 352 VTGSRDTTLRVWDVESGRHLATLHGHH---AAVRCVQFD--GTTVVSGGYDFTVKIWNAH 406
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH+NRV L + V +GS D+ +R+W+
Sbjct: 407 TGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWD 446
Score = 150 (57.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 47/169 (27%), Positives = 70/169 (41%)
Query: 10 LLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVT 69
++GS GH V++ D V+G+ D + K+W I G T GH +
Sbjct: 245 IMGSAVLRGHEDHVITCMQIHD-DVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQ 303
Query: 70 FFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVA--FSRSGRLLLAGYDD 127
G +GS D T +++ D L + + G TS + +G +L+ G D
Sbjct: 304 ISQCGRYIVSGSTDRTVKVWST-VDGSLL-----HTLQGHTSTVRCMAMAGSILVTGSRD 357
Query: 128 FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
VWD L GH V C V DG V +G +D ++IWN
Sbjct: 358 TTLRVWDVESGRHLATLHGHHAAVRC--VQFDGTTVVSGGYDFTVKIWN 404
Score = 141 (54.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 44/163 (26%), Positives = 76/163 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V + D T VSG D + K+W+ G C +T GH + + ++ F
Sbjct: 376 GHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIV 433
Query: 78 ATGSDDATCRLFDI-RAD-QELA--MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
+GS D + R++D R + QE + H ++ G+ G +L++ D + VW
Sbjct: 434 CSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGM-----QLRGNILVSCNADSHVRVW 488
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D + +L+GH + ++ L M VAT S D +++W+
Sbjct: 489 DIHEGTCVHMLSGHRSAITSLQWFGRNM-VATSSDDGTVKLWD 530
Score = 132 (51.5 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 37/136 (27%), Positives = 60/136 (44%)
Query: 41 DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY 100
D K W+ GHE + + TGSDD T +++ I D+ MY
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDD-VLVTGSDDNTLKVWCI--DKGEVMY 290
Query: 101 SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG 160
+ G+ + S+ GR +++G D VW ++ L GH + V C+ + G
Sbjct: 291 TLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--G 348
Query: 161 MAVATGSWDSFLRIWN 176
+ TGS D+ LR+W+
Sbjct: 349 SILVTGSRDTTLRVWD 364
Score = 117 (46.2 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT + L ++ VS D+ ++WDI +G+C GH S I ++ +F
Sbjct: 461 GHTSLTSGMQLRGNI--LVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMV- 517
Query: 78 ATGSDDATCRLFDI 91
AT SDD T +L+DI
Sbjct: 518 ATSSDDGTVKLWDI 531
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 209 (78.6 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 50/160 (31%), Positives = 79/160 (49%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG V + ++ R VSG+ D + K+W DGS T GH S + + G
Sbjct: 294 GHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GSIL 351
Query: 78 ATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
TGS D T R++D+ + + LA ++ H + V F G +++G DF +W++
Sbjct: 352 VTGSRDTTLRVWDVESGRHLATLHGHH---AAVRCVQFD--GTTVVSGGYDFTVKIWNAH 406
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH+NRV L + V +GS D+ +R+W+
Sbjct: 407 TGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWD 446
Score = 150 (57.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 47/169 (27%), Positives = 70/169 (41%)
Query: 10 LLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVT 69
++GS GH V++ D V+G+ D + K+W I G T GH +
Sbjct: 245 IMGSAVLRGHEDHVITCMQIHD-DVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQ 303
Query: 70 FFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVA--FSRSGRLLLAGYDD 127
G +GS D T +++ D L + + G TS + +G +L+ G D
Sbjct: 304 ISQCGRYIVSGSTDRTVKVWST-VDGSLL-----HTLQGHTSTVRCMAMAGSILVTGSRD 357
Query: 128 FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
VWD L GH V C V DG V +G +D ++IWN
Sbjct: 358 TTLRVWDVESGRHLATLHGHHAAVRC--VQFDGTTVVSGGYDFTVKIWN 404
Score = 141 (54.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 44/163 (26%), Positives = 76/163 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V + D T VSG D + K+W+ G C +T GH + + ++ F
Sbjct: 376 GHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIV 433
Query: 78 ATGSDDATCRLFDI-RAD-QELA--MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
+GS D + R++D R + QE + H ++ G+ G +L++ D + VW
Sbjct: 434 CSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGM-----QLRGNILVSCNADSHVRVW 488
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D + +L+GH + ++ L M VAT S D +++W+
Sbjct: 489 DIHEGTCVHMLSGHRSAITSLQWFGRNM-VATSSDDGTVKLWD 530
Score = 132 (51.5 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 37/136 (27%), Positives = 60/136 (44%)
Query: 41 DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY 100
D K W+ GHE + + TGSDD T +++ I D+ MY
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDD-VLVTGSDDNTLKVWCI--DKGEVMY 290
Query: 101 SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG 160
+ G+ + S+ GR +++G D VW ++ L GH + V C+ + G
Sbjct: 291 TLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--G 348
Query: 161 MAVATGSWDSFLRIWN 176
+ TGS D+ LR+W+
Sbjct: 349 SILVTGSRDTTLRVWD 364
Score = 117 (46.2 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT + L ++ VS D+ ++WDI +G+C GH S I ++ +F
Sbjct: 461 GHTSLTSGMQLRGNI--LVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMV- 517
Query: 78 ATGSDDATCRLFDI 91
AT SDD T +L+DI
Sbjct: 518 ATSSDDGTVKLWDI 531
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 205 (77.2 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 49/162 (30%), Positives = 80/162 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH + S+ P VS + DA+ K+WD G ++T GH + + + F G
Sbjct: 103 TGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNL 162
Query: 77 FATGSDDATCRLFDIRA-DQELAMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
A+ S D T +L+D + D ++ HD N+ C V F+ SG L++ D VW+
Sbjct: 163 LASCSADLTIKLWDFQTYDCVKTLHGHDHNVSC----VRFTPSGDQLISSSRDKTIKVWE 218
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L GH++ V + V+EDG +A+ S D ++ WN
Sbjct: 219 AATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWN 260
Score = 163 (62.4 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVA 113
K GH + IN+V F P+ + S+DAT +++D + + E + H N + +
Sbjct: 99 KHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTN---AVQDID 155
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
F ++G LL + D +WD + L GHD+ VSC+ T G + + S D ++
Sbjct: 156 FDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIK 215
Query: 174 IW 175
+W
Sbjct: 216 VW 217
Score = 121 (47.7 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
ATGS D T +++++ + LA Y HDN + +V F G+ LL+ DD VWD
Sbjct: 320 ATGSRDKTIKIWELATGRCLATYIGHDN---WVRAVRFHPCGKFLLSVGDDKTIRVWDIA 376
Query: 137 KTERAGIL-AGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ + H + +SCL +ATG D +++W
Sbjct: 377 QGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVW 416
Score = 120 (47.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 42/159 (26%), Positives = 70/159 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH +V + P +S + D + K+W+ G C +T GHE + +T +G
Sbjct: 188 GHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCI 247
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+ S+D T + ++I + LA Y H +++ +AFS + + + G +
Sbjct: 248 ASCSNDQTIKTWNIVKGECLATYREHSHVV---ECLAFSTANIIDIPGSLLSTPEGKSKV 304
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
K G L G C G +ATGS D ++IW
Sbjct: 305 KQGPGGNLVGQ-----C------GY-LATGSRDKTIKIW 331
Score = 110 (43.8 bits), Expect = 0.00034, P = 0.00034
Identities = 24/83 (28%), Positives = 40/83 (48%)
Query: 9 ALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAV 68
+LL +P +L +G+ D + K+W++ G C T+ GH++ + AV
Sbjct: 293 SLLSTPEGKSKVKQGPGGNLVGQCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAV 352
Query: 69 TFFPNGWAFATGSDDATCRLFDI 91
F P G + DD T R++DI
Sbjct: 353 RFHPCGKFLLSVGDDKTIRVWDI 375
>RGD|1582817 [details] [associations]
symbol:Pwp2 "PWP2 periodic tryptophan protein homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1582817 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 KO:K14558
InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 CTD:5822 OrthoDB:EOG4R7V93 IPI:IPI00372838
RefSeq:NP_001162124.1 UniGene:Rn.208019 ProteinModelPortal:D3ZV54
PRIDE:D3ZV54 Ensembl:ENSRNOT00000001605 GeneID:690297
KEGG:rno:690297 UCSC:RGD:1582817 NextBio:740604 Uniprot:D3ZV54
Length = 920
Score = 211 (79.3 bits), Expect = 6.1e-16, P = 6.1e-16
Identities = 50/161 (31%), Positives = 78/161 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH +++L+ +PD + V+G D K+W+ G C T H S + VTF G
Sbjct: 373 GHFNSMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTLTEHSSGVTGVTFTATGHVI 432
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAG-YDDFNCNVWDSM 136
T S D T R +D+ + ++ + VA SG ++ AG D F VW SM
Sbjct: 433 VTSSLDGTVRAYDLHRYRNFRTFTSPRPT-QFSCVAVDSSGEIVSAGAQDSFEIFVW-SM 490
Query: 137 KTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+T R +L+GH+ +S L +A+ SWD +R+W+
Sbjct: 491 QTGRLLDVLSGHEGPISGLCFNPMKSILASASWDKTVRLWD 531
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 208 (78.3 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 50/163 (30%), Positives = 85/163 (52%)
Query: 16 ASGHTGD--VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN 73
+S GD V S++ +PD + +G D ++WDI + GHE +I ++ F +
Sbjct: 340 SSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKD 399
Query: 74 GWAFATGSDDATCRLFDIRA-DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNV 132
G +GS D T L+D+ A +Q+L +++ D G+T+V FS G+ + AG D +
Sbjct: 400 GKTLVSGSGDRTVCLWDVEAGEQKLILHTDD----GVTTVMFSPDGQFIAAGSLDKVIRI 455
Query: 133 WDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
W S T L GH+ V + + DG + +GS D+ +++W
Sbjct: 456 WTSSGT-LVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLW 497
Score = 182 (69.1 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 50/169 (29%), Positives = 79/169 (46%)
Query: 19 HTGD-VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
HT D V ++ +PD + +G+ D ++W G+ + GHE + +V F P+G
Sbjct: 427 HTDDGVTTVMFSPDGQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYSVAFSPDGKYL 485
Query: 78 ATGSDDATCRLFDIRADQELA--MYSHDNI----ICG----ITSVAFSRSGRLLLAGYDD 127
+GS D T +L++++ +A MY I G I SV S G+ +++G D
Sbjct: 486 VSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKD 545
Query: 128 FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
W L GH+N V + V+ +G ATGS D RIW+
Sbjct: 546 RTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIWS 594
Score = 161 (61.7 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 41/129 (31%), Positives = 63/129 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIR------------DGSCKQTFPGHESDI 65
GH V S++ +PD + VSG+ D + KLW+++ G CKQTF GH+ I
Sbjct: 468 GHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFI 527
Query: 66 NAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAG 124
+VT P+G +GS D T + + + +L + H+N + SVA S +G G
Sbjct: 528 LSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNN---SVISVAVSPNGHCFATG 584
Query: 125 YDDFNCNVW 133
D +W
Sbjct: 585 SGDLRARIW 593
Score = 125 (49.1 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH ++S++++PD + +SG+ D + + W + T GH + + +V PNG
Sbjct: 521 TGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHC 580
Query: 77 FATGSDDATCRLF 89
FATGS D R++
Sbjct: 581 FATGSGDLRARIW 593
Score = 125 (49.1 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 33/120 (27%), Positives = 58/120 (48%)
Query: 61 HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIIC-G---ITSVAFSR 116
H S I V F +G ATG + A +F++ + + + ++ G + SVAFS
Sbjct: 298 HTSVICYVRFSADGKFLATGCNRAAM-VFNVETGKLITLLQEESSKREGDLYVRSVAFSP 356
Query: 117 SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
G+ L G +D +WD + +L GH+ + L ++DG + +GS D + +W+
Sbjct: 357 DGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWD 416
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 210 (79.0 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 54/160 (33%), Positives = 77/160 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V +P FVSG D A+LW + F GH +D+N + PN
Sbjct: 584 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYV 643
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
ATGS D T RL+D+ + +++ H I +T FS +GR L G D +WD
Sbjct: 644 ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLT---FSPNGRFLATGATDGRVLLWDIG 700
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
G L GH + V L + DG +A+GS D+ +R+W+
Sbjct: 701 HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 202 (76.2 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 41/122 (33%), Positives = 67/122 (54%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH DV P+ +G+ D + +LWD+ +G+C + F GH+ I+++TF PNG
Sbjct: 625 AGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 684
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
ATG+ D L+DI + + H + +C S+ FSR G +L +G D +WD+
Sbjct: 685 LATGATDGRVLLWDIGHGLMVGELKGHTDTVC---SLRFSRDGEILASGSMDNTVRLWDA 741
Query: 136 MK 137
+K
Sbjct: 742 VK 743
Score = 174 (66.3 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 38/159 (23%), Positives = 70/159 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+G V S +PD +S + D + +LW ++ +C + GH + F P G+ F
Sbjct: 542 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF 601
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+G D RL+ Q L +++ + + + + + G D +WD +
Sbjct: 602 VSGGHDRVARLWATDHYQPLRIFAGH--LADVNCTRYHPNSNYVATGSADRTVRLWDVLN 659
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
I GH + L + +G +ATG+ D + +W+
Sbjct: 660 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 698
Score = 123 (48.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/152 (25%), Positives = 64/152 (42%)
Query: 25 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA 84
S+ A D+ + D ++ D + S + GH + +F P+ + S+D
Sbjct: 507 SVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDG 566
Query: 85 TCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL 144
T RL+ ++ L Y N + FS G ++G D +W + + I
Sbjct: 567 TVRLWSLQTFTCLVGYKGHNY--PVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 624
Query: 145 AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
AGH V+C + VATGS D +R+W+
Sbjct: 625 AGHLADVNCTRYHPNSNYVATGSADRTVRLWD 656
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 208 (78.3 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 49/171 (28%), Positives = 82/171 (47%)
Query: 7 KSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDIN 66
K+AL+ A GHTG V ++ P F + + D +A+LW + F GH SD++
Sbjct: 411 KTALV---AYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVD 467
Query: 67 AVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGY 125
VTF PN TGS D TCRL+D+ + +++ H +T+VA + G + +
Sbjct: 468 CVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQ---PVTAVAIAPDGHTMASAD 524
Query: 126 DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ ++WD R + GH + L + + + +G D +R W+
Sbjct: 525 SEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWD 575
Score = 194 (73.4 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 43/165 (26%), Positives = 75/165 (45%)
Query: 12 GSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFF 71
GS H+G V + +PD + +S + DASA+LW + + + GH + V F
Sbjct: 371 GSVRLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFG 430
Query: 72 PNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN 131
P G FAT S D T +L+ L +++ + + V F + +L G D C
Sbjct: 431 PFGHYFATASHDQTAQLWSCDHIYPLRVFAGH--LSDVDCVTFHPNSAYVLTGSSDKTCR 488
Query: 132 VWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+WD + + GH V+ + + DG +A+ + + +W+
Sbjct: 489 LWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWD 533
Score = 170 (64.9 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 39/138 (28%), Positives = 64/138 (46%)
Query: 2 CDHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGH 61
CDH+ + +GH DV ++ P+ ++G+ D + +LWD+ G + F GH
Sbjct: 450 CDHIYPLRVF-----AGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGH 504
Query: 62 ESDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRL 120
+ AV P+G A+ + L+DI + + M H I S++FSR +
Sbjct: 505 TQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRG---NIYSLSFSRESTV 561
Query: 121 LLAGYDDFNCNVWDSMKT 138
L++G D WD KT
Sbjct: 562 LVSGGSDCTVRAWDVFKT 579
Score = 120 (47.3 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 41/174 (23%), Positives = 69/174 (39%)
Query: 19 HTGDVMSLS-LAPDMRTFVSGACDASAKLWDIR---------------DGSCKQTFPGHE 62
HT + M+ + +PD G ++ +LW I+ DGS + H
Sbjct: 322 HTNNNMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLL--SHS 379
Query: 63 SDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLL 122
+ TF P+ + S+DA+ RL+ + D + A+ ++ + VAF G
Sbjct: 380 GPVYGTTFSPDNKYLLSCSEDASARLWSV--DTKTALVAYKGHTGPVWDVAFGPFGHYFA 437
Query: 123 AGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D +W + AGH + V C+ + V TGS D R+W+
Sbjct: 438 TASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWD 491
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 207 (77.9 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 47/160 (29%), Positives = 78/160 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V S+ + D + S + D++ K+WD GS + T GH + +V F +
Sbjct: 377 GHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLL 436
Query: 78 ATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+ SDD+T +++D + + H + + SV FS RLL + DD +WD+
Sbjct: 437 ASASDDSTVKIWDTGTGSLQHTLEGHRD---WVRSVIFSHDSRLLASASDDRTVRIWDTE 493
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K L GH + V+ + + D +A+ S D +RIW+
Sbjct: 494 KGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWD 533
Score = 190 (71.9 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 47/163 (28%), Positives = 78/163 (47%)
Query: 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
A GH V+S+S + D R S + D + K+WD GS + T GH + +V F +
Sbjct: 291 ALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDS 350
Query: 75 WAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A+ SD +T +++D + + H + + SV FS +LL + DD +W
Sbjct: 351 RLLASASD-STVKIWDTGTGSLQHTLEGHRD---WVRSVIFSHDSQLLASASDDSTVKIW 406
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D+ L GH + V + + D +A+ S DS ++IW+
Sbjct: 407 DTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWD 449
Score = 139 (54.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 35/124 (28%), Positives = 60/124 (48%)
Query: 54 CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSV 112
C Q GHE+ + +V++ + A+ SDD T +++D + + H +++ SV
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLV---RSV 344
Query: 113 AFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL 172
FS RLL A D +WD+ L GH + V + + D +A+ S DS +
Sbjct: 345 IFSHDSRLL-ASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTV 403
Query: 173 RIWN 176
+IW+
Sbjct: 404 KIWD 407
Score = 128 (50.1 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V S+ + D R S + D + ++WD GS K T GH S + +V+F +
Sbjct: 461 GHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLL 520
Query: 78 ATGSDDATCRLFDIRA 93
A+ S+D T R++DI A
Sbjct: 521 ASASNDQTVRIWDIEA 536
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 207 (77.9 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 50/160 (31%), Positives = 82/160 (51%)
Query: 21 GD--VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
GD + S+ +PD +GA D + K+WDI + TF GHE DI ++ + +G
Sbjct: 326 GDLYIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIV 385
Query: 79 TGSDDATCRLFDIRADQELAMYSHDNI--ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+GS D +++DI + ++ + G+TSVA S GRL+ AG D +WD+
Sbjct: 386 SGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQ 445
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
GH + V + + DG ++A+GS D L++W+
Sbjct: 446 TGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWD 485
Score = 196 (74.1 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 55/167 (32%), Positives = 81/167 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHE----SDINAVTFFPN 73
GH D+ SL + D R VSG+ D AK+WDI G C T E + + +V P+
Sbjct: 367 GHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPD 426
Query: 74 GWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
G A GS D RL+D + L Y + + + SVAFS G+ L +G D + +W
Sbjct: 427 GRLVAAGSLDNIVRLWDAQTGYFLERY--EGHLDSVYSVAFSPDGKSLASGSLDKSLKLW 484
Query: 134 D-SMKTERAGILA---GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D S R+ A GH + V + + DG + +GS D ++ W+
Sbjct: 485 DLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWD 531
Score = 188 (71.2 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 51/173 (29%), Positives = 85/173 (49%)
Query: 11 LGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTF 70
LG+ G V S++++PD R +G+ D +LWD + G + + GH + +V F
Sbjct: 407 LGNEEVGPKNG-VTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAF 465
Query: 71 FPNGWAFATGSDDATCRLFDIRADQEL----AMYS-HDNIICGITSVAFSRSGRLLLAGY 125
P+G + A+GS D + +L+D+ + A ++ H + + SVAFS G L++G
Sbjct: 466 SPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVL---SVAFSPDGSWLISGS 522
Query: 126 DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMA---VATGSWDSFLRIW 175
D + WD +L GH N V + ++ + ATGS D R+W
Sbjct: 523 KDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLW 575
Score = 185 (70.2 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 50/168 (29%), Positives = 85/168 (50%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGH-ESD----INAVTFFPN 73
H V ++ + D + +G C+ SA+++D+ G F E D I +V F P+
Sbjct: 280 HNSVVCCVNFSNDGKYLATG-CNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 74 GWAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNV 132
G ATG++D T +++DI + + Y H+ I S+ +S GR +++G D +
Sbjct: 339 GNYLATGAEDKTVKVWDIHTKKIQHTFYGHE---LDIYSLDYSSDGRFIVSGSGDKKAKI 395
Query: 133 WDSMKTERAGILA----GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
WD K + A L G N V+ + ++ DG VA GS D+ +R+W+
Sbjct: 396 WDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWD 443
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 210 (79.0 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 53/159 (33%), Positives = 82/159 (51%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V +S +P F + + D +A+LW S + F GH SD N V F PN
Sbjct: 719 GHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYL 778
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
ATGS+D + RL++I+ + + ++ I +VAFS GRLL +D + +WD
Sbjct: 779 ATGSNDKSARLWEIQTGKCVRIFMGHR--APIYTVAFSPDGRLLATAGEDTSVILWDLST 836
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ + GH V L + DG +A+GS D +R+W+
Sbjct: 837 GKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWD 875
Score = 180 (68.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 39/122 (31%), Positives = 64/122 (52%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH D ++ P++ +G+ D SA+LW+I+ G C + F GH + I V F P+G
Sbjct: 760 TGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRL 819
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
AT +D + L+D+ +++ M H C + S+ FS G +L +G D +WD
Sbjct: 820 LATAGEDTSVILWDLSTGKKVKKMDGHTK--C-VYSLDFSCDGSILASGSSDCTVRLWDV 876
Query: 136 MK 137
K
Sbjct: 877 KK 878
Score = 176 (67.0 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 44/159 (27%), Positives = 75/159 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+G V S +PD + +S + D +A+LW + S + GH + V+F P G+ F
Sbjct: 677 GHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYF 736
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
AT S D T RL+ L +++ C +V F + L G +D + +W+
Sbjct: 737 ATASHDRTARLWTTNHISPLRIFTGHLSDCN--TVRFHPNINYLATGSNDKSARLWEIQT 794
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ I GH + + + DG +AT D+ + +W+
Sbjct: 795 GKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWD 833
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 36/139 (25%), Positives = 57/139 (41%)
Query: 37 SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE 96
SG+ +S KL + S +TF GH + +F P+ + S+D T RL+ +
Sbjct: 654 SGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSN 713
Query: 97 LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGV 156
L Y N + V+FS G D +W + I GH + + +
Sbjct: 714 LVCYKGHNF--PVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRF 771
Query: 157 TEDGMAVATGSWDSFLRIW 175
+ +ATGS D R+W
Sbjct: 772 HPNINYLATGSNDKSARLW 790
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 206 (77.6 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 47/160 (29%), Positives = 80/160 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V L ++P F SG+ D +A+LW + + GH +D++ V F PN
Sbjct: 400 GHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYL 459
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
ATGS D T RL+ + + +++ H + S+AFS +G+ L + +D +WD
Sbjct: 460 ATGSTDKTVRLWSAQQGNSVRLFTGHRG---PVLSLAFSPNGKYLASAGEDQRLKLWDLA 516
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH + ++ L + D +A+ S D+ +R+W+
Sbjct: 517 SGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWD 556
Score = 152 (58.6 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 36/125 (28%), Positives = 62/125 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH DV + P+ +G+ D + +LW + G+ + F GH + ++ F PNG
Sbjct: 441 AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKY 500
Query: 77 FATGSDDATCRLFDIRAD---QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A+ +D +L+D+ + +EL ++ DNI TS+ FS L+ + D + VW
Sbjct: 501 LASAGEDQRLKLWDLASGTLYKELRGHT-DNI----TSLTFSPDSSLIASASMDNSVRVW 555
Query: 134 DSMKT 138
D T
Sbjct: 556 DIRNT 560
Score = 151 (58.2 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 42/161 (26%), Positives = 67/161 (41%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT--FPGHESDINAVTFFPNGW 75
GH G V S D +S + D S + WD+ GS T + GH + + P
Sbjct: 358 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQGHAYPVWDLDISPYSL 415
Query: 76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
FA+GS D T RL+ L +Y+ + + V F + L G D +W +
Sbjct: 416 YFASGSHDRTARLWSFDRTYPLRIYAGH--LADVDCVKFHPNSNYLATGSTDKTVRLWSA 473
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + GH V L + +G +A+ D L++W+
Sbjct: 474 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWD 514
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 207 (77.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 47/160 (29%), Positives = 76/160 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+G V +S +PD + +S + D + +LW + + ++ GH + V F P G F
Sbjct: 515 GHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYF 574
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
T S D T RL+ L +++ H N + V F + + G D C +WD
Sbjct: 575 VTASHDQTARLWATDHIYPLRIFAGHIN---DVDCVEFHPNSNYVFTGSSDKTCRMWDVH 631
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ GH N V+CL V+ DG +A+G D + +W+
Sbjct: 632 TGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWD 671
Score = 200 (75.5 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 49/161 (30%), Positives = 78/161 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V + +P FV+ + D +A+LW + F GH +D++ V F PN
Sbjct: 557 GHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYV 616
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
TGS D TCR++D+ + ++ H N + +A S GR L +G +D VWD
Sbjct: 617 FTGSSDKTCRMWDVHTGNCVRVFLGHTN---SVNCLAVSPDGRWLASGGEDGIICVWDIG 673
Query: 137 KTERAGILAGHDNR-VSCLGVTEDGMAVATGSWDSFLRIWN 176
R + GH + L + DG + +G D+ +R+W+
Sbjct: 674 SGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWD 714
Score = 192 (72.6 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 41/128 (32%), Positives = 69/128 (53%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH DV + P+ +G+ D + ++WD+ G+C + F GH + +N + P+G
Sbjct: 598 AGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRW 657
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
A+G +D ++DI + + L +M H + S+AFSR G +L++G D + VWD
Sbjct: 658 LASGGEDGIICVWDIGSGRRLKSMRGHAR--ASLYSLAFSRDGTVLVSGCADNSVRVWDV 715
Query: 136 MK-TERAG 142
K T AG
Sbjct: 716 KKNTNDAG 723
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 199 (75.1 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 46/163 (28%), Positives = 84/163 (51%)
Query: 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
A SGH+G VM PD + + D + WDI G ++ F GH + +N+V G
Sbjct: 93 AMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRG 152
Query: 75 WAF-ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
+GSDD T +++D R ++ A ++ ++ +T+V F +G +++G D +W
Sbjct: 153 QQLLCSGSDDRTIKIWDAR--KKHAAHTLESPF-QVTAVCFGDTGEQVISGGIDNEVKIW 209
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D K L GH + ++ + ++ +G + T + D+ LR+W+
Sbjct: 210 DIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWD 252
Score = 158 (60.7 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 46/164 (28%), Positives = 70/164 (42%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP--GHESDINAVTFFPNGW 75
GH G++ + P+ +S D +W + + C+ GH + F P+G
Sbjct: 53 GHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYE-DCENVMAMSGHSGAVMEAHFTPDGS 111
Query: 76 AFATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGR-LLLAGYDDFNCNVW 133
T S D T +DI Q + H N + SV SR G+ LL +G DD +W
Sbjct: 112 HIFTCSTDKTLAFWDIATGQRQRRFKGHGNFV---NSVQGSRRGQQLLCSGSDDRTIKIW 168
Query: 134 DSMKTERAGILAGHDNRVS-CLGVTEDGMAVATGSWDSFLRIWN 176
D+ K A L + C G T G V +G D+ ++IW+
Sbjct: 169 DARKKHAAHTLESPFQVTAVCFGDT--GEQVISGGIDNEVKIWD 210
Score = 121 (47.7 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 39/144 (27%), Positives = 62/144 (43%)
Query: 36 VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR--A 93
+SG D K+WDIR + GH I ++ P G T + D T R++D+R A
Sbjct: 198 ISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYA 257
Query: 94 DQELAM---YSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI-LAGHD 148
E + H N + A+S + +G D + +WD + T R L GH+
Sbjct: 258 PGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWD-VNTRRILYKLPGHN 316
Query: 149 NRVSCLGVTEDGMAVATGSWDSFL 172
V+ + + + +GS D L
Sbjct: 317 GSVNAVDFSPKEPLILSGSSDKTL 340
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 204 (76.9 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 47/160 (29%), Positives = 80/160 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V L ++P F SG+ D +A+LW + + GH +D++ V F PN
Sbjct: 382 GHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYL 441
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
ATGS D T RL+ + + +++ H + S+AFS +G+ L + +D +WD
Sbjct: 442 ATGSTDKTVRLWSAQQGNSVRLFTGHRG---PVLSLAFSPNGKYLASAGEDQRLKLWDLA 498
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH + ++ L + D +A+ S D+ +R+W+
Sbjct: 499 SGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWD 538
Score = 151 (58.2 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 36/125 (28%), Positives = 62/125 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH DV + P+ +G+ D + +LW + G+ + F GH + ++ F PNG
Sbjct: 423 AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKY 482
Query: 77 FATGSDDATCRLFDIRAD---QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A+ +D +L+D+ + +EL ++ DNI TS+ FS L+ + D + VW
Sbjct: 483 LASAGEDQRLKLWDLASGTLYKELRGHT-DNI----TSLTFSPDSGLIASASMDNSVRVW 537
Query: 134 DSMKT 138
D T
Sbjct: 538 DIRNT 542
Score = 151 (58.2 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 42/161 (26%), Positives = 67/161 (41%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT--FPGHESDINAVTFFPNGW 75
GH G V S D +S + D S + WD+ GS T + GH + + P
Sbjct: 340 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQGHAYPVWDLDISPYSL 397
Query: 76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
FA+GS D T RL+ L +Y+ + + V F + L G D +W +
Sbjct: 398 YFASGSHDRTARLWSFDRTYPLRIYAGH--LADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + GH V L + +G +A+ D L++W+
Sbjct: 456 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWD 496
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 203 (76.5 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 47/160 (29%), Positives = 79/160 (49%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V L ++P F S + D +A+LW + + GH +D++ V F PN
Sbjct: 378 GHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYL 437
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
ATGS D T RL+ + + +++ H + S+AFS +G+ L + +D +WD
Sbjct: 438 ATGSTDKTVRLWSTQQGNSVRLFTGHRG---PVLSLAFSPNGKYLASAGEDQRLKLWDLA 494
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH + ++ L + D VA+ S D+ +R+W+
Sbjct: 495 SGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWD 534
Score = 150 (57.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 47/183 (25%), Positives = 75/183 (40%)
Query: 2 CDHL----DKSALLGSP--AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK 55
CD L D+ LG+ GH G V S D +S + D S + WD+ GS
Sbjct: 314 CDFLEEEDDEDDNLGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFT 371
Query: 56 QT--FPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVA 113
T + GH + + P+ FA+ S D T RL+ L +Y+ + + V
Sbjct: 372 NTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGH--LADVDCVK 429
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
F + L G D +W + + + GH V L + +G +A+ D L+
Sbjct: 430 FHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLK 489
Query: 174 IWN 176
+W+
Sbjct: 490 LWD 492
Score = 149 (57.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 35/121 (28%), Positives = 61/121 (50%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH DV + P+ +G+ D + +LW + G+ + F GH + ++ F PNG
Sbjct: 419 AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKY 478
Query: 77 FATGSDDATCRLFDIRAD---QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A+ +D +L+D+ + +EL ++ DNI TS+ FS L+ + D + VW
Sbjct: 479 LASAGEDQRLKLWDLASGTLYKELRGHT-DNI----TSLTFSPDSSLVASASMDNSVRVW 533
Query: 134 D 134
D
Sbjct: 534 D 534
Score = 137 (53.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH G V+SL+ +P+ + S D KLWD+ G+ + GH +I ++TF P+
Sbjct: 461 TGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSL 520
Query: 77 FATGSDDATCRLFDIRA 93
A+ S D + R++DIR+
Sbjct: 521 VASASMDNSVRVWDIRS 537
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 203 (76.5 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 46/160 (28%), Positives = 80/160 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V + ++P F SG+ D +A+LW + + GH +D++ V F PN
Sbjct: 382 GHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYL 441
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
ATGS D T RL+ + + +++ H + S+AFS +G+ L + +D +WD
Sbjct: 442 ATGSTDKTVRLWSAQQGNSVRLFTGHRG---PVLSLAFSPNGKYLASAGEDQRLKLWDLA 498
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH + ++ L + D +A+ S D+ +R+W+
Sbjct: 499 SGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWD 538
Score = 154 (59.3 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 43/161 (26%), Positives = 67/161 (41%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT--FPGHESDINAVTFFPNGW 75
GH G V S D +S + D S + WD+ GS T + GH + V P
Sbjct: 340 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQGHAYPVWDVDISPYSL 397
Query: 76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
FA+GS D T RL+ L +Y+ + + V F + L G D +W +
Sbjct: 398 YFASGSHDRTARLWSFDRTYPLRIYAGH--LADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + GH V L + +G +A+ D L++W+
Sbjct: 456 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWD 496
Score = 152 (58.6 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 36/125 (28%), Positives = 62/125 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH DV + P+ +G+ D + +LW + G+ + F GH + ++ F PNG
Sbjct: 423 AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKY 482
Query: 77 FATGSDDATCRLFDIRAD---QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A+ +D +L+D+ + +EL ++ DNI TS+ FS L+ + D + VW
Sbjct: 483 LASAGEDQRLKLWDLASGTLFKELRGHT-DNI----TSLTFSPDSSLIASASMDNSVRVW 537
Query: 134 DSMKT 138
D T
Sbjct: 538 DIRNT 542
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 203 (76.5 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 48/155 (30%), Positives = 76/155 (49%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD 82
V +++ +PD + V+G D KLWD+ + F GHE DI ++ F NG +GS
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSG 422
Query: 83 DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT--ER 140
D T RL+D+ Q + +N G+T++A S + + + G D VW T ER
Sbjct: 423 DRTARLWDVETGQCILKLEIEN---GVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVER 479
Query: 141 AGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L GH V + + D + +GS D +++W
Sbjct: 480 ---LEGHKESVYSIAFSPDSSILLSGSLDKTIKVW 511
Score = 172 (65.6 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 49/172 (28%), Positives = 76/172 (44%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
SGH D+ SL + + R VSG+ D +A+LWD+ G C E+ + A+ PN
Sbjct: 399 SGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLE-IENGVTAIAISPNDQF 457
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A GS D R++ + + H + S+AFS +LL+G D VW+
Sbjct: 458 IAVGSLDQIIRVWSVSGTLVERLEGHKE---SVYSIAFSPDSSILLSGSLDKTIKVWELQ 514
Query: 137 KTERAGILA------------GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
T G+ A GH + V + V+ D +GS D ++ W+
Sbjct: 515 ATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWD 566
Score = 152 (58.6 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT V+S++++PD R +SG+ D S + WD++ G T GH++ + +V F P+G
Sbjct: 535 TGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQ 594
Query: 77 FATGSDDATCRLFDI 91
FA+GS D R++ I
Sbjct: 595 FASGSGDLRARIWSI 609
Score = 151 (58.2 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 42/165 (25%), Positives = 82/165 (49%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD 82
V +++++P+ + G+ D ++W + G+ + GH+ + ++ F P+ +GS
Sbjct: 446 VTAIAISPNDQFIAVGSLDQIIRVWSV-SGTLVERLEGHKESVYSIAFSPDSSILLSGSL 504
Query: 83 DATCRLFDIRADQELAMYS-HDNIICGIT---------SVAFSRSGRLLLAGYDDFNCNV 132
D T ++++++A + + + + IC T SVA S R L+G D +
Sbjct: 505 DKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQF 564
Query: 133 WDSMKTERAGILA-GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
WD ++T ++ + GH N V + + DG A+GS D RIW+
Sbjct: 565 WD-LQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWS 608
Score = 141 (54.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 8 SALLGSPAASGHTGDVMSLS-LAPDMRTFVSGACDASAKLWDIR-DGSCKQTFP------ 59
SA GS + +G G+ +AP T A +++ W + + +CK+ F
Sbjct: 252 SANAGSISQAGPDGEYQGREQIAPVSDT--EAARKTTSQSWYVTYNPACKRVFNINLVHT 309
Query: 60 -GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICG----ITSVAF 114
H S + V F NG ATG + A +FD++ ++L ++ + ++AF
Sbjct: 310 LEHPSVVCCVKFSNNGKYLATGCNQAA-NVFDVQTGKKLFTLHEESPDPSRDLYVRTIAF 368
Query: 115 SRSGRLLLAGYDDFNCNVWDSMKTERAG-ILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
S G+ L+ G +D +WD + T++ + +GH+ + L + +G + +GS D R
Sbjct: 369 SPDGKYLVTGTEDRQIKLWD-LSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTAR 427
Query: 174 IWN 176
+W+
Sbjct: 428 LWD 430
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 200 (75.5 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 48/161 (29%), Positives = 83/161 (51%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP-NGW 75
SGH G V SL++ P+ F SGA D + K+W++ G+ + T GH S + + P + +
Sbjct: 140 SGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRHPY 199
Query: 76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F+ G +D + +D+ ++ + Y H ++ G+ ++A LL+ G D VWD
Sbjct: 200 LFSCG-EDKMVKCWDLETNKVIRHY-HGHL-SGVYTLALHPRLDLLVTGGRDGVARVWDM 256
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+L+GH V+ + E V TGS D+ +R+W+
Sbjct: 257 RTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWD 297
Score = 141 (54.7 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 44/159 (27%), Positives = 68/159 (42%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V +L+L P + V+G D A++WD+R S GH + V
Sbjct: 225 GHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADPQV 284
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
TGS DAT RL+D+ A + + + +H GI S+A + A + W
Sbjct: 285 ITGSLDATVRLWDLAAGKTMGVLTHHKK--GIRSLA-THPREFTFASASTGSIKQWKCPG 341
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
E GH+ ++ L V ED + + G S + W+
Sbjct: 342 GEFMQNFEGHNAIINTLSVNEDNVLFSGGDNGS-MSFWD 379
Score = 113 (44.8 bits), Expect = 0.00015, P = 0.00015
Identities = 37/167 (22%), Positives = 70/167 (41%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
SGHTG V + ++G+ DA+ +LWD+ G H+ I ++ P +
Sbjct: 266 SGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVLTHHKKGIRSLATHPREFT 325
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD-- 134
FA+ S + + + + + + N I SV +L +G D+ + + WD
Sbjct: 326 FASAST-GSIKQWKCPGGEFMQNFEGHNAIINTLSV---NEDNVLFSGGDNGSMSFWDWK 381
Query: 135 -SMKTERAGILAGHDNRVSCLGV---TED--GMAVATGSWDSFLRIW 175
+ + A + + G+ T D G+ + TG D +++W
Sbjct: 382 TGYRYQTIDTTAQPGSLEAEAGIMTSTFDRTGLRLITGEADKTIKVW 428
>SGD|S000005738 [details] [associations]
symbol:STE4 "G protein beta subunit" species:4932
"Saccharomyces cerevisiae" [GO:0001403 "invasive growth in response
to glucose limitation" evidence=IMP] [GO:0019236 "response to
pheromone" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA;IMP] [GO:0004871 "signal transducer activity"
evidence=IEA;IMP] [GO:0031684 "heterotrimeric G-protein complex
cycle" evidence=IMP] [GO:0010525 "regulation of transposition,
RNA-mediated" evidence=IMP] [GO:0005937 "mating projection"
evidence=IDA] [GO:0000750 "pheromone-dependent signal transduction
involved in conjugation with cellular fusion" evidence=IGI;IPI]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000005738 InterPro:IPR001632 EMBL:BK006948
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0000750 GO:GO:0001403 EMBL:X92441
PRINTS:PR00319 GO:GO:0005937 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
InterPro:IPR016346 PIRSF:PIRSF002394 KO:K07972 OMA:YTHDNIL
OrthoDB:EOG454D7D EMBL:M23982 EMBL:Z75120 PIR:S60939
RefSeq:NP_014855.3 RefSeq:NP_014857.3 PDB:1SCG PDBsum:1SCG
ProteinModelPortal:P18851 SMR:P18851 DIP:DIP-954N IntAct:P18851
MINT:MINT-364784 STRING:P18851 PaxDb:P18851 PeptideAtlas:P18851
DNASU:854387 EnsemblFungi:YOR212W GeneID:854387 GeneID:854389
KEGG:sce:YOR212W KEGG:sce:YOR214C CYGD:YOR212w NextBio:976538
Genevestigator:P18851 GermOnline:YOR212W GO:GO:0031684
GO:GO:0010525 Uniprot:P18851
Length = 423
Score = 199 (75.1 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 51/158 (32%), Positives = 78/158 (49%)
Query: 22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP---GHESDINAVTFFPNGWAFA 78
D+ +L D + V+G+ + + ++D+R TF G+E T+ +
Sbjct: 272 DINALRFFKDGMSIVAGSDNGAINMYDLRSDCSIATFSLFRGYEERTPTPTYMAANMEYN 331
Query: 79 TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT 138
T T + + Y DN G+ S+ FS SGRL+ + Y D C VWD +K
Sbjct: 332 TAQSPQTLK-------STSSSYL-DNQ--GVVSLDFSASGRLMYSCYTDIGCVVWDVLKG 381
Query: 139 ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
E G L GH RV+ + + DG+AV TGSWDS ++IW+
Sbjct: 382 EIVGKLEGHGGRVTGVRSSPDGLAVCTGSWDSTMKIWS 419
Score = 152 (58.6 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 32/91 (35%), Positives = 51/91 (56%)
Query: 17 SGHTGDVMSLSLAPD------MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTF 70
S H GDV++L++ + TF S D +WD R S Q+F ++SDINA+ F
Sbjct: 219 SDHLGDVLALAIPEEPNSENSSNTFASCGSDGYTYIWDSRSPSAVQSFYVNDSDINALRF 278
Query: 71 FPNGWAFATGSDDATCRLFDIRADQELAMYS 101
F +G + GSD+ ++D+R+D +A +S
Sbjct: 279 FKDGMSIVAGSDNGAINMYDLRSDCSIATFS 309
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 202 (76.2 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 47/160 (29%), Positives = 80/160 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V + ++P F + + D +A+LW + + GH SD++ V F PN
Sbjct: 394 GHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYI 453
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
ATGS D T RL+ R + +++ H + ++AFS +G+ L + +D +WD
Sbjct: 454 ATGSTDKTVRLWSTRQGASVRLFTGHRG---PVLTLAFSPNGKYLASAGEDQRLKLWDLA 510
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH + +S L ++D VA+ S D+ +R+W+
Sbjct: 511 SGGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWD 550
Score = 147 (56.8 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 42/181 (23%), Positives = 76/181 (41%)
Query: 2 CDHLDKSA----LLGSPAAS--GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK 55
CD L++ A GS + GH+G V + D +S + D++ + WD++ +
Sbjct: 330 CDVLEEEADDEDASGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNT 389
Query: 56 QTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS 115
+ GH + V P F+T S D T RL+ L +Y+ + + V F
Sbjct: 390 VLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGH--LSDVDCVKFH 447
Query: 116 RSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ + G D +W + + + GH V L + +G +A+ D L++W
Sbjct: 448 PNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLW 507
Query: 176 N 176
+
Sbjct: 508 D 508
Score = 146 (56.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 32/119 (26%), Positives = 57/119 (47%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH DV + P+ +G+ D + +LW R G+ + F GH + + F PNG
Sbjct: 435 AGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKY 494
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
A+ +D +L+D+ + + H + I +S++FS+ L+ + D VWD
Sbjct: 495 LASAGEDQRLKLWDLASGGLFKDLRGHTDTI---SSLSFSQDSSLVASASMDNTVRVWD 550
Score = 122 (48.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH G V++L+ +P+ + S D KLWD+ G + GH I++++F +
Sbjct: 477 TGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSL 536
Query: 77 FATGSDDATCRLFDIR 92
A+ S D T R++DIR
Sbjct: 537 VASASMDNTVRVWDIR 552
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 201 (75.8 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 54/161 (33%), Positives = 81/161 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG V S + ++ +SG+ D + K+W+ G C T GH S + +
Sbjct: 299 GHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RV 354
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+GS DAT R++DI Q L + H + + V + GR +++G DF VWD
Sbjct: 355 VSGSRDATLRVWDIETGQCLHVLMGH---VAAVRCVQYD--GRRVVSGAYDFMVKVWDP- 408
Query: 137 KTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+TE L GH NRV L DG+ V +GS D+ +R+W+
Sbjct: 409 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWD 447
Score = 141 (54.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 44/160 (27%), Positives = 77/160 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V + L + VSG+ DA+ ++WDI G C GH + + V + +G
Sbjct: 339 GHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRV 394
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ D +++D + L + H N + S+ F G +++G D + VWD
Sbjct: 395 VSGAYDFMVKVWDPETETCLHTLQGHTN---RVYSLQFD--GIHVVSGSLDTSIRVWDVE 449
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH + S + + +D + V+ G+ DS ++IW+
Sbjct: 450 TGNCIHTLTGHQSLTSGMEL-KDNILVS-GNADSTVKIWD 487
Score = 140 (54.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 37/122 (30%), Positives = 61/122 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V SL D VSG+ D S ++WD+ G+C T GH+S + + N
Sbjct: 419 GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--IL 474
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNII-CGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ D+T +++DI+ Q L N +T + F+++ ++ DD +WD +
Sbjct: 475 VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWD-L 531
Query: 137 KT 138
KT
Sbjct: 532 KT 533
Score = 133 (51.9 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 43/169 (25%), Positives = 74/169 (43%)
Query: 11 LGSPAA-SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVT 69
L SP GH V++ R VSG+ D + K+W G C +T GH + +
Sbjct: 250 LKSPKVLKGHDDHVITCLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 308
Query: 70 FFPNGWAFATGSDDATCRLFDIRADQEL-AMYSHDNII-CGITSVAFSRSGRLLLAGYDD 127
N +GS D T ++++ + + +Y H + + C + +++G D
Sbjct: 309 MRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC------MHLHEKRVVSGSRD 360
Query: 128 FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
VWD + +L GH V C V DG V +G++D +++W+
Sbjct: 361 ATLRVWDIETGQCLHVLMGHVAAVRC--VQYDGRRVVSGAYDFMVKVWD 407
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 27/82 (32%), Positives = 43/82 (52%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG---HESDINAVTFFPN 73
+GH + L ++ VSG D++ K+WDI+ G C QT G H+S + + F N
Sbjct: 458 TGHQSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN 515
Query: 74 GWAFATGSDDATCRLFDIRADQ 95
T SDD T +L+D++ +
Sbjct: 516 --FVITSSDDGTVKLWDLKTGE 535
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 201 (75.8 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 54/161 (33%), Positives = 81/161 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG V S + ++ +SG+ D + K+W+ G C T GH S + +
Sbjct: 341 GHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RV 396
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+GS DAT R++DI Q L + H + + V + GR +++G DF VWD
Sbjct: 397 VSGSRDATLRVWDIETGQCLHVLMGH---VAAVRCVQYD--GRRVVSGAYDFMVKVWDP- 450
Query: 137 KTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+TE L GH NRV L DG+ V +GS D+ +R+W+
Sbjct: 451 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWD 489
Score = 141 (54.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 44/160 (27%), Positives = 77/160 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V + L + VSG+ DA+ ++WDI G C GH + + V + +G
Sbjct: 381 GHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRV 436
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ D +++D + L + H N + S+ F G +++G D + VWD
Sbjct: 437 VSGAYDFMVKVWDPETETCLHTLQGHTN---RVYSLQFD--GIHVVSGSLDTSIRVWDVE 491
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH + S + + +D + V+ G+ DS ++IW+
Sbjct: 492 TGNCIHTLTGHQSLTSGMEL-KDNILVS-GNADSTVKIWD 529
Score = 139 (54.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 36/122 (29%), Positives = 61/122 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V SL D VSG+ D S ++WD+ G+C T GH+S + + N
Sbjct: 461 GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--IL 516
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ D+T +++DI+ Q L + +T + F+++ ++ DD +WD +
Sbjct: 517 VSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWD-L 573
Query: 137 KT 138
KT
Sbjct: 574 KT 575
Score = 133 (51.9 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 43/169 (25%), Positives = 74/169 (43%)
Query: 11 LGSPAA-SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVT 69
L SP GH V++ R VSG+ D + K+W G C +T GH + +
Sbjct: 292 LRSPKVLKGHDDHVITCLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 350
Query: 70 FFPNGWAFATGSDDATCRLFDIRADQEL-AMYSHDNII-CGITSVAFSRSGRLLLAGYDD 127
N +GS D T ++++ + + +Y H + + C + +++G D
Sbjct: 351 MRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC------MHLHEKRVVSGSRD 402
Query: 128 FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
VWD + +L GH V C V DG V +G++D +++W+
Sbjct: 403 ATLRVWDIETGQCLHVLMGHVAAVRC--VQYDGRRVVSGAYDFMVKVWD 449
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 27/82 (32%), Positives = 43/82 (52%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG---HESDINAVTFFPN 73
+GH + L ++ VSG D++ K+WDI+ G C QT G H+S + + F N
Sbjct: 500 TGHQSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN 557
Query: 74 GWAFATGSDDATCRLFDIRADQ 95
T SDD T +L+D++ +
Sbjct: 558 --FVITSSDDGTVKLWDLKTGE 577
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 199 (75.1 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 46/161 (28%), Positives = 82/161 (50%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP-NGW 75
SGH G V + + P + F +GA D + K+WD+ G K T GH + + + P + +
Sbjct: 160 SGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPY 219
Query: 76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
F+ G +D + +D+ ++ + Y H ++ G+ ++ + +L+ D VWD
Sbjct: 220 LFSCG-EDKMVKCWDLETNKVIRHY-HGHL-SGVYALKLHPTLDVLVTAGRDAVARVWDM 276
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ +L+GH + V+ L V E V TGS DS +R+W+
Sbjct: 277 RTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWD 317
Score = 136 (52.9 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 39/159 (24%), Positives = 70/159 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V +L L P + V+ DA A++WD+R GH+S + ++
Sbjct: 245 GHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQV 304
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
TGS D+T RL+D+ A + L +H + +++ +G D N W +
Sbjct: 305 VTGSMDSTIRLWDLAAGKTLTTLTHHKKT--VRALSLHPDEFTFASGSSD-NIKHWKFPE 361
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
G GH+ V+ L + D + + +G+ + + W+
Sbjct: 362 GAFMGNFEGHNAIVNTLSINSDNV-MFSGADNGSMCFWD 399
Score = 120 (47.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 30/118 (25%), Positives = 55/118 (46%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
SGH V SL++ V+G+ D++ +LWD+ G T H+ + A++ P+ +
Sbjct: 286 SGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHPDEFT 345
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
FA+GS D + + + + N I S+ S ++ +G D+ + WD
Sbjct: 346 FASGSSD-NIKHWKFPEGAFMGNFEGHNAIVNTLSI---NSDNVMFSGADNGSMCFWD 399
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 201 (75.8 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 54/161 (33%), Positives = 81/161 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG V S + ++ +SG+ D + K+W+ G C T GH S + +
Sbjct: 339 GHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RV 394
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+GS DAT R++DI Q L + H + + V + GR +++G DF VWD
Sbjct: 395 VSGSRDATLRVWDIETGQCLHVLMGH---VAAVRCVQYD--GRRVVSGAYDFMVKVWDP- 448
Query: 137 KTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+TE L GH NRV L DG+ V +GS D+ +R+W+
Sbjct: 449 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWD 487
Score = 141 (54.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 44/160 (27%), Positives = 77/160 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V + L + VSG+ DA+ ++WDI G C GH + + V + +G
Sbjct: 379 GHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRV 434
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ D +++D + L + H N + S+ F G +++G D + VWD
Sbjct: 435 VSGAYDFMVKVWDPETETCLHTLQGHTN---RVYSLQFD--GIHVVSGSLDTSIRVWDVE 489
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH + S + + +D + V+ G+ DS ++IW+
Sbjct: 490 TGNCIHTLTGHQSLTSGMEL-KDNILVS-GNADSTVKIWD 527
Score = 140 (54.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 37/122 (30%), Positives = 61/122 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V SL D VSG+ D S ++WD+ G+C T GH+S + + N
Sbjct: 459 GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--IL 514
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNII-CGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ D+T +++DI+ Q L N +T + F+++ ++ DD +WD +
Sbjct: 515 VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWD-L 571
Query: 137 KT 138
KT
Sbjct: 572 KT 573
Score = 133 (51.9 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 43/169 (25%), Positives = 74/169 (43%)
Query: 11 LGSPAA-SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVT 69
L SP GH V++ R VSG+ D + K+W G C +T GH + +
Sbjct: 290 LKSPKVLKGHDDHVITCLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 348
Query: 70 FFPNGWAFATGSDDATCRLFDIRADQEL-AMYSHDNII-CGITSVAFSRSGRLLLAGYDD 127
N +GS D T ++++ + + +Y H + + C + +++G D
Sbjct: 349 MRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC------MHLHEKRVVSGSRD 400
Query: 128 FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
VWD + +L GH V C V DG V +G++D +++W+
Sbjct: 401 ATLRVWDIETGQCLHVLMGHVAAVRC--VQYDGRRVVSGAYDFMVKVWD 447
Score = 119 (46.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 27/82 (32%), Positives = 43/82 (52%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG---HESDINAVTFFPN 73
+GH + L ++ VSG D++ K+WDI+ G C QT G H+S + + F N
Sbjct: 498 TGHQSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN 555
Query: 74 GWAFATGSDDATCRLFDIRADQ 95
T SDD T +L+D++ +
Sbjct: 556 --FVITSSDDGTVKLWDLKTGE 575
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 201 (75.8 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 54/161 (33%), Positives = 81/161 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG V S + ++ +SG+ D + K+W+ G C T GH S + +
Sbjct: 341 GHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RV 396
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+GS DAT R++DI Q L + H + + V + GR +++G DF VWD
Sbjct: 397 VSGSRDATLRVWDIETGQCLHVLMGH---VAAVRCVQYD--GRRVVSGAYDFMVKVWDP- 450
Query: 137 KTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+TE L GH NRV L DG+ V +GS D+ +R+W+
Sbjct: 451 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWD 489
Score = 141 (54.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 44/160 (27%), Positives = 77/160 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V + L + VSG+ DA+ ++WDI G C GH + + V + +G
Sbjct: 381 GHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRV 436
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ D +++D + L + H N + S+ F G +++G D + VWD
Sbjct: 437 VSGAYDFMVKVWDPETETCLHTLQGHTN---RVYSLQFD--GIHVVSGSLDTSIRVWDVE 491
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH + S + + +D + V+ G+ DS ++IW+
Sbjct: 492 TGNCIHTLTGHQSLTSGMEL-KDNILVS-GNADSTVKIWD 529
Score = 139 (54.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 36/122 (29%), Positives = 61/122 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V SL D VSG+ D S ++WD+ G+C T GH+S + + N
Sbjct: 461 GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--IL 516
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ D+T +++DI+ Q L + +T + F+++ ++ DD +WD +
Sbjct: 517 VSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWD-L 573
Query: 137 KT 138
KT
Sbjct: 574 KT 575
Score = 133 (51.9 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 43/169 (25%), Positives = 74/169 (43%)
Query: 11 LGSPAA-SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVT 69
L SP GH V++ R VSG+ D + K+W G C +T GH + +
Sbjct: 292 LKSPKVLKGHDDHVITCLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 350
Query: 70 FFPNGWAFATGSDDATCRLFDIRADQEL-AMYSHDNII-CGITSVAFSRSGRLLLAGYDD 127
N +GS D T ++++ + + +Y H + + C + +++G D
Sbjct: 351 MRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC------MHLHEKRVVSGSRD 402
Query: 128 FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
VWD + +L GH V C V DG V +G++D +++W+
Sbjct: 403 ATLRVWDIETGQCLHVLMGHVAAVRC--VQYDGRRVVSGAYDFMVKVWD 449
Score = 119 (46.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 27/82 (32%), Positives = 43/82 (52%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG---HESDINAVTFFPN 73
+GH + L ++ VSG D++ K+WDI+ G C QT G H+S + + F N
Sbjct: 500 TGHQSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN 557
Query: 74 GWAFATGSDDATCRLFDIRADQ 95
T SDD T +L+D++ +
Sbjct: 558 --FVITSSDDGTVKLWDLKTGE 577
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 202 (76.2 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 52/160 (32%), Positives = 76/160 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V +P FVSG D A+LW + F GH +D+ F PN
Sbjct: 539 GHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYV 598
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
ATGS D T RL+D+ + +++ H I S+AFS +G+ L +G D +WD
Sbjct: 599 ATGSSDRTVRLWDVLNGNCVRIFTGHKG---PIHSLAFSPNGKFLASGSTDGRVLLWDIG 655
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH + L + DG +A+GS D+ +R+W+
Sbjct: 656 HGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWD 695
Score = 188 (71.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 42/172 (24%), Positives = 76/172 (44%)
Query: 5 LDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD 64
+D+ S GH+G V +S +PD +S + D + +LW ++ +C + GH
Sbjct: 484 MDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYP 543
Query: 65 INAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAG 124
+ F P G+ F +G D RL+ Q L +++ + +T F + + G
Sbjct: 544 VWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGH--LADVTCTRFHPNSNYVATG 601
Query: 125 YDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D +WD + I GH + L + +G +A+GS D + +W+
Sbjct: 602 SSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWD 653
Score = 184 (69.8 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 39/122 (31%), Positives = 63/122 (51%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH DV P+ +G+ D + +LWD+ +G+C + F GH+ I+++ F PNG
Sbjct: 580 AGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKF 639
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
A+GS D L+DI +A + H I + FSR G ++ +G D +WD
Sbjct: 640 LASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALK---FSRDGEIIASGSIDNTVRLWDV 696
Query: 136 MK 137
M+
Sbjct: 697 MR 698
Score = 128 (50.1 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 38/148 (25%), Positives = 63/148 (42%)
Query: 29 APDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRL 88
A D+ + D ++ D + S + GH + V+F P+ + S+D T RL
Sbjct: 466 AADLNLIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRL 525
Query: 89 FDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHD 148
+ ++ L Y N + FS G ++G D +W + + I AGH
Sbjct: 526 WSLQTFTCLVGYKGHNY--PVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHL 583
Query: 149 NRVSCLGVTEDGMAVATGSWDSFLRIWN 176
V+C + VATGS D +R+W+
Sbjct: 584 ADVTCTRFHPNSNYVATGSSDRTVRLWD 611
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 201 (75.8 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 54/161 (33%), Positives = 81/161 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG V S + ++ +SG+ D + K+W+ G C T GH S + +
Sbjct: 419 GHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RV 474
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+GS DAT R++DI Q L + H + + V + GR +++G DF VWD
Sbjct: 475 VSGSRDATLRVWDIETGQCLHVLMGH---VAAVRCVQYD--GRRVVSGAYDFMVKVWDP- 528
Query: 137 KTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+TE L GH NRV L DG+ V +GS D+ +R+W+
Sbjct: 529 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWD 567
Score = 141 (54.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 44/160 (27%), Positives = 77/160 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V + L + VSG+ DA+ ++WDI G C GH + + V + +G
Sbjct: 459 GHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRV 514
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ D +++D + L + H N + S+ F G +++G D + VWD
Sbjct: 515 VSGAYDFMVKVWDPETETCLHTLQGHTN---RVYSLQFD--GIHVVSGSLDTSIRVWDVE 569
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH + S + + +D + V+ G+ DS ++IW+
Sbjct: 570 TGNCIHTLTGHQSLTSGMEL-KDNILVS-GNADSTVKIWD 607
Score = 140 (54.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 37/122 (30%), Positives = 61/122 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V SL D VSG+ D S ++WD+ G+C T GH+S + + N
Sbjct: 539 GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--IL 594
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNII-CGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ D+T +++DI+ Q L N +T + F+++ ++ DD +WD +
Sbjct: 595 VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWD-L 651
Query: 137 KT 138
KT
Sbjct: 652 KT 653
Score = 133 (51.9 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 43/169 (25%), Positives = 74/169 (43%)
Query: 11 LGSPAA-SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVT 69
L SP GH V++ R VSG+ D + K+W G C +T GH + +
Sbjct: 370 LKSPKVLKGHDDHVITCLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 428
Query: 70 FFPNGWAFATGSDDATCRLFDIRADQEL-AMYSHDNII-CGITSVAFSRSGRLLLAGYDD 127
N +GS D T ++++ + + +Y H + + C + +++G D
Sbjct: 429 MRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC------MHLHEKRVVSGSRD 480
Query: 128 FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
VWD + +L GH V C V DG V +G++D +++W+
Sbjct: 481 ATLRVWDIETGQCLHVLMGHVAAVRC--VQYDGRRVVSGAYDFMVKVWD 527
Score = 119 (46.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 27/82 (32%), Positives = 43/82 (52%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG---HESDINAVTFFPN 73
+GH + L ++ VSG D++ K+WDI+ G C QT G H+S + + F N
Sbjct: 578 TGHQSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN 635
Query: 74 GWAFATGSDDATCRLFDIRADQ 95
T SDD T +L+D++ +
Sbjct: 636 --FVITSSDDGTVKLWDLKTGE 655
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 201 (75.8 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 54/161 (33%), Positives = 81/161 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG V S + ++ +SG+ D + K+W+ G C T GH S + +
Sbjct: 424 GHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RV 479
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+GS DAT R++DI Q L + H + + V + GR +++G DF VWD
Sbjct: 480 VSGSRDATLRVWDIETGQCLHVLMGH---VAAVRCVQYD--GRRVVSGAYDFMVKVWDP- 533
Query: 137 KTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+TE L GH NRV L DG+ V +GS D+ +R+W+
Sbjct: 534 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWD 572
Score = 141 (54.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 44/160 (27%), Positives = 77/160 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V + L + VSG+ DA+ ++WDI G C GH + + V + +G
Sbjct: 464 GHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRV 519
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ D +++D + L + H N + S+ F G +++G D + VWD
Sbjct: 520 VSGAYDFMVKVWDPETETCLHTLQGHTN---RVYSLQFD--GIHVVSGSLDTSIRVWDVE 574
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH + S + + +D + V+ G+ DS ++IW+
Sbjct: 575 TGNCIHTLTGHQSLTSGMEL-KDNILVS-GNADSTVKIWD 612
Score = 140 (54.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 37/122 (30%), Positives = 61/122 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V SL D VSG+ D S ++WD+ G+C T GH+S + + N
Sbjct: 544 GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--IL 599
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNII-CGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ D+T +++DI+ Q L N +T + F+++ ++ DD +WD +
Sbjct: 600 VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWD-L 656
Query: 137 KT 138
KT
Sbjct: 657 KT 658
Score = 133 (51.9 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 43/169 (25%), Positives = 74/169 (43%)
Query: 11 LGSPAA-SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVT 69
L SP GH V++ R VSG+ D + K+W G C +T GH + +
Sbjct: 375 LKSPKVLKGHDDHVITCLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 433
Query: 70 FFPNGWAFATGSDDATCRLFDIRADQEL-AMYSHDNII-CGITSVAFSRSGRLLLAGYDD 127
N +GS D T ++++ + + +Y H + + C + +++G D
Sbjct: 434 MRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC------MHLHEKRVVSGSRD 485
Query: 128 FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
VWD + +L GH V C V DG V +G++D +++W+
Sbjct: 486 ATLRVWDIETGQCLHVLMGHVAAVRC--VQYDGRRVVSGAYDFMVKVWD 532
Score = 119 (46.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 27/82 (32%), Positives = 43/82 (52%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG---HESDINAVTFFPN 73
+GH + L ++ VSG D++ K+WDI+ G C QT G H+S + + F N
Sbjct: 583 TGHQSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN 640
Query: 74 GWAFATGSDDATCRLFDIRADQ 95
T SDD T +L+D++ +
Sbjct: 641 --FVITSSDDGTVKLWDLKTGE 660
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 201 (75.8 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 54/161 (33%), Positives = 81/161 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHTG V S + ++ +SG+ D + K+W+ G C T GH S + +
Sbjct: 472 GHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RV 527
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+GS DAT R++DI Q L + H + + V + GR +++G DF VWD
Sbjct: 528 VSGSRDATLRVWDIETGQCLHVLMGH---VAAVRCVQYD--GRRVVSGAYDFMVKVWDP- 581
Query: 137 KTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+TE L GH NRV L DG+ V +GS D+ +R+W+
Sbjct: 582 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWD 620
Score = 141 (54.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 44/160 (27%), Positives = 77/160 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V + L + VSG+ DA+ ++WDI G C GH + + V + +G
Sbjct: 512 GHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRV 567
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ D +++D + L + H N + S+ F G +++G D + VWD
Sbjct: 568 VSGAYDFMVKVWDPETETCLHTLQGHTN---RVYSLQFD--GIHVVSGSLDTSIRVWDVE 622
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH + S + + +D + V+ G+ DS ++IW+
Sbjct: 623 TGNCIHTLTGHQSLTSGMEL-KDNILVS-GNADSTVKIWD 660
Score = 135 (52.6 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 34/118 (28%), Positives = 58/118 (49%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V SL D VSG+ D S ++WD+ G+C T GH+S + + N
Sbjct: 592 GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--IL 647
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+G+ D+T +++DI+ Q L + +T + F+++ ++ DD +WD
Sbjct: 648 VSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKN--FVITSSDDGTVKLWD 703
Score = 133 (51.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 43/169 (25%), Positives = 74/169 (43%)
Query: 11 LGSPAA-SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVT 69
L SP GH V++ R VSG+ D + K+W G C +T GH + +
Sbjct: 423 LKSPKVLKGHDDHVITCLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 481
Query: 70 FFPNGWAFATGSDDATCRLFDIRADQEL-AMYSHDNII-CGITSVAFSRSGRLLLAGYDD 127
N +GS D T ++++ + + +Y H + + C + +++G D
Sbjct: 482 MRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC------MHLHEKRVVSGSRD 533
Query: 128 FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
VWD + +L GH V C V DG V +G++D +++W+
Sbjct: 534 ATLRVWDIETGQCLHVLMGHVAAVRC--VQYDGRRVVSGAYDFMVKVWD 580
Score = 122 (48.0 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG---HESDINAVTFFPN 73
+GH + L ++ VSG D++ K+WDI+ G C QT G H+S + + F N
Sbjct: 631 TGHQSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKN 688
Query: 74 GWAFATGSDDATCRLFDIRADQ 95
T SDD T +L+D+R +
Sbjct: 689 --FVITSSDDGTVKLWDLRTGE 708
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 199 (75.1 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 45/160 (28%), Positives = 80/160 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V + ++P F SG+ D +A+LW + + GH +D++ V F PN
Sbjct: 382 GHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYL 441
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
ATGS D T RL+ + + +++ H + S++FS +G+ L + +D +WD
Sbjct: 442 ATGSTDKTVRLWSAQQGNSVRLFTGHRG---PVLSLSFSPNGKYLASAGEDQRLKLWDLA 498
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH + ++ L + D +A+ S D+ +R+W+
Sbjct: 499 SGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWD 538
Score = 153 (58.9 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 34/123 (27%), Positives = 60/123 (48%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH DV + P+ +G+ D + +LW + G+ + F GH + +++F PNG
Sbjct: 423 AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKY 482
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
A+ +D +L+D+ + + H + ITS+AFS L+ + D + VWD
Sbjct: 483 LASAGEDQRLKLWDLASGTLFKELRGHTD---SITSLAFSPDSGLIASASMDNSVRVWDI 539
Query: 136 MKT 138
T
Sbjct: 540 RST 542
Score = 153 (58.9 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 43/161 (26%), Positives = 67/161 (41%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT--FPGHESDINAVTFFPNGW 75
GH G V S D +S + D S + WD+ GS T + GH + V P
Sbjct: 340 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQGHAYPVWDVDISPFSL 397
Query: 76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
FA+GS D T RL+ L +Y+ + + V F + L G D +W +
Sbjct: 398 YFASGSHDRTARLWSFDRTYPLRIYAGH--LADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + GH V L + +G +A+ D L++W+
Sbjct: 456 QQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWD 496
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 201 (75.8 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 45/159 (28%), Positives = 76/159 (47%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
H + +L + D + ++GA D K+WD+ G C TF H S ++ + F G
Sbjct: 338 HYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLF 397
Query: 79 TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAG-YDDFNCNVWDSMK 137
+ S D + R +D+ + ++ + + + +A SG ++ AG D F +W
Sbjct: 398 SSSLDGSVRAWDLIRYRNFRTFTAPSRV-QFSCIAVDPSGEIVCAGSQDSFEIFMWSVQT 456
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ LAGH+ VS L G +A+GSWD +RIW+
Sbjct: 457 GQLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWD 495
Score = 119 (46.9 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 42/163 (25%), Positives = 67/163 (41%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHES-DINAVTFFPNGWAF 77
HT V L + S + D S + WD+ +TF + + P+G
Sbjct: 380 HTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDPSGEIV 439
Query: 78 ATGSDDA-TCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
GS D+ ++ ++ Q L + H+ ++S++F+ SG LL +G D +WD
Sbjct: 440 CAGSQDSFEIFMWSVQTGQLLETLAGHEG---PVSSLSFNSSGSLLASGSWDKTVRIWDI 496
Query: 136 MKTERAGILAGHD--NRVSCLGVTEDGMAVATGSWDSFLRIWN 176
R+GI+ + V L DG V S D L WN
Sbjct: 497 FS--RSGIVEPLPIPSDVLSLAFHPDGKEVCVASLDGQLTFWN 537
Score = 110 (43.8 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 29/134 (21%), Positives = 60/134 (44%)
Query: 46 LWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS-HDN 104
+W+ + S H ++ + + +G TG+DD +++D+ + + ++ H +
Sbjct: 323 VWEWQSESYVLKQQSHYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTS 382
Query: 105 IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDN-RVSCLGVTEDGMAV 163
+ G+ FS+ G +L + D + WD ++ + SC+ V G V
Sbjct: 383 AVSGL---CFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDPSGEIV 439
Query: 164 ATGSWDSF-LRIWN 176
GS DSF + +W+
Sbjct: 440 CAGSQDSFEIFMWS 453
Score = 41 (19.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLW 47
A +GH V+S + D +T + + D + +W
Sbjct: 185 ALTGHKNTVVSGFFSKDQQTIYTVSKDGALFVW 217
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 195 (73.7 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + SL +P + SG+ DAS +W+++ S F GH+ + V F P+
Sbjct: 16 GHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLL 75
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+ S D T RL+ E ++ +H + SV FS G+ LL DD + +W
Sbjct: 76 ASSSRDKTVRLWVPSVKGESVLFRAHTG---SVRSVCFSADGQSLLTASDDQSIKLWSVH 132
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + L H+N V C + DG + + S D +++W+
Sbjct: 133 RQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWD 172
Score = 162 (62.1 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 46/159 (28%), Positives = 66/159 (41%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF--PGHESDINAVTFFPNGWA 76
H V +PD + VS + D + KLWD TF PG S V F P+
Sbjct: 143 HNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSY--VDFHPSSTC 200
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
AT S D T R++DIR L Y + + +++F SG LL D + D +
Sbjct: 201 IATASSDNTVRVWDIRTHTLLQHYQVHS--AAVNALSFHPSGNHLLTASSDSTLKILDLL 258
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ L GH SC+ + G A+ D + +W
Sbjct: 259 EGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVW 297
Score = 139 (54.0 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 36/163 (22%), Positives = 70/163 (42%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLW--DIRDGSCKQTFPGHESDINAVTFFPNG 74
+GH V + +P S + D + +LW ++ S F H + +V F +G
Sbjct: 57 TGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESV--LFRAHTGSVRSVCFSADG 114
Query: 75 WAFATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
+ T SDD + +L+ + + + + H+N + FS G+L+++ DD +W
Sbjct: 115 QSLLTASDDQSIKLWSVHRQKIICTLREHNN---WVRCARFSPDGQLMVSVSDDRTVKLW 171
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D+ + S + +AT S D+ +R+W+
Sbjct: 172 DASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWD 214
Score = 139 (54.0 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 47/177 (26%), Positives = 71/177 (40%)
Query: 6 DKSALLGSPAASG-------HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF 58
DK+ L P+ G HTG V S+ + D ++ ++ + D S KLW + T
Sbjct: 81 DKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTL 140
Query: 59 PGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITS-VAFSRS 117
H + + F P+G + SDD T +L+D + Q + + G +S V F S
Sbjct: 141 REHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPG---GYSSYVDFHPS 197
Query: 118 GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 174
+ D VWD H V+ L G + T S DS L+I
Sbjct: 198 STCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKI 254
Score = 133 (51.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 34/128 (26%), Positives = 63/128 (49%)
Query: 51 DGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS-HDNIICGI 109
D + ++ F GH I ++ F P+G A+GS DA+ +++++ ++ H + +
Sbjct: 7 DPTLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKD---AV 63
Query: 110 TSVAFSRSGRLLLAGYDDFNCNVW-DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW 168
T V FS S LL + D +W S+K E + H V + + DG ++ T S
Sbjct: 64 TCVQFSPSAHLLASSSRDKTVRLWVPSVKGESV-LFRAHTGSVRSVCFSADGQSLLTASD 122
Query: 169 DSFLRIWN 176
D +++W+
Sbjct: 123 DQSIKLWS 130
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 191 (72.3 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 46/162 (28%), Positives = 78/162 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WA 76
GH G +M + D VS D + ++WD+ GSC + F H +N+V G
Sbjct: 77 GHKGAIMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQM 136
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGI--TSVAFSRSGRLLLAGYDDFNCNVWD 134
+ SDD T + D+R+ +E A IC T+V F+ + ++ G D VWD
Sbjct: 137 ICSASDDGTVMVHDMRS-KEAAK----KFICKYQQTAVTFNDAADNVICGGIDNQIKVWD 191
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ + +L+GH + ++ L V+ +G + + S D L W+
Sbjct: 192 MLRNDVRYVLSGHRDTITSLSVSHNGNFLLSNSMDCSLMSWD 233
>TAIR|locus:2074825 [details] [associations]
symbol:AT3G50390 "AT3G50390" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BT030030 IPI:IPI00547079
RefSeq:NP_190608.2 UniGene:At.50263 ProteinModelPortal:A2RVN9
SMR:A2RVN9 STRING:A2RVN9 PRIDE:A2RVN9 EnsemblPlants:AT3G50390.1
GeneID:824203 KEGG:ath:AT3G50390 TAIR:At3g50390
HOGENOM:HOG000236376 InParanoid:A2RVN9 OMA:HKKLLQF PhylomeDB:A2RVN9
ProtClustDB:CLSN2681936 Genevestigator:A2RVN9 Uniprot:A2RVN9
Length = 469
Score = 195 (73.7 bits), Expect = 9.8e-15, P = 9.8e-15
Identities = 53/171 (30%), Positives = 84/171 (49%)
Query: 13 SPAASG--HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTF 70
S AA G H + L+L+ D R SG+ D + K+W + D C ++ HE +NAV
Sbjct: 202 SSAALGFRHLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVS 261
Query: 71 FPNGWAFATGSDDATCRLFDIRADQ--ELAMYSHDNII---CGITSVAFSRSGRLLLAGY 125
+G F TGS D T +++ R DQ + + + ++ C +T++A +S L+ G
Sbjct: 262 GFDGLVF-TGSADGTVKVWR-REDQAKDTKHFFSETLLKQDCAVTAIAVDQSATLVYCGS 319
Query: 126 DDFNCNVWDSMKT-ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
D N W+ + G+L GH V CL G + +GS D +R+W
Sbjct: 320 SDGTVNFWERENNMKNGGVLKGHKLAVLCLVAA--GNLMFSGSADLGIRVW 368
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 191 (72.3 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 49/162 (30%), Positives = 84/162 (51%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP--NGW 75
GH+G VM L D S + D + +WD G + GH S +N+ FP G
Sbjct: 97 GHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSC--FPARRGP 154
Query: 76 AFA-TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
A TGSDD T +L+DIR ++ ++++ N + SV F+ + +++G D + VWD
Sbjct: 155 QLACTGSDDGTVKLWDIR--KKASVHTFQNTY-QVLSVTFNDTSDQIISGGIDNDIKVWD 211
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + + GH + V+ L ++ DG + + S D+ +R+W+
Sbjct: 212 LRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWD 253
Score = 137 (53.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 49/170 (28%), Positives = 79/170 (46%)
Query: 18 GHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GHT V S A + +G+ D + KLWDIR + TF + + +VTF
Sbjct: 139 GHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQ 197
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD- 134
+G D +++D+R ++ + +M H + +T ++ S G LL+ D + VWD
Sbjct: 198 IISGGIDNDIKVWDLRQNKLIYSMQGHGD---SVTGLSLSADGSYLLSNSMDNSVRVWDI 254
Query: 135 ---SMKTERAGILAG--HD---NRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ K I G H+ N + C + DG +A GS D F+ IW+
Sbjct: 255 RPFAPKERCVKIFQGNVHNFEKNLLRC-SWSADGSKIAAGSADRFVYIWD 303
Score = 126 (49.4 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 33/120 (27%), Positives = 51/120 (42%)
Query: 60 GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE--LAMYSHDNIICGITSVAFSRS 117
GHE ++ F PNG A+ D ++++ D E + H + + ++
Sbjct: 54 GHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSG---AVMELHYNTD 110
Query: 118 GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRV-SCLGVTEDGMAVATGSWDSFLRIWN 176
G LL + D VWDS ER L GH + V SC TGS D +++W+
Sbjct: 111 GSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWD 170
Score = 118 (46.6 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 39/162 (24%), Positives = 70/162 (43%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
+T V+S++ +SG D K+WD+R + GH + ++ +G
Sbjct: 182 NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLL 241
Query: 79 TGSDDATCRLFDIR--ADQE--LAMYSHD--NIICGITSVAFSRSGRLLLAGYDDFNCNV 132
+ S D + R++DIR A +E + ++ + N + ++S G + AG D +
Sbjct: 242 SNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYI 301
Query: 133 WDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 174
WD+ L GH V+ + + V +GS D L I
Sbjct: 302 WDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYI 343
>UNIPROTKB|B2CCY7 [details] [associations]
symbol:PRPF19 "Nuclear matrix protein 200" species:9823
"Sus scrofa" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000974 "Prp19 complex" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:CU861565
EMBL:EU417752 EMBL:AB282747 RefSeq:NP_001121929.1 UniGene:Ssc.44045
STRING:B2CCY7 Ensembl:ENSSSCT00000014327 GeneID:100144769
KEGG:ssc:100144769 Uniprot:B2CCY7
Length = 504
Score = 195 (73.7 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 43/171 (25%), Positives = 74/171 (43%)
Query: 6 DKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDI 65
DKS+ GHT V S+ P S + DA+ ++W + + SC Q HES +
Sbjct: 250 DKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAHESAV 309
Query: 66 NAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY 125
++ G + SDD DI+ + L + + C +T F G + G
Sbjct: 310 TGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGT 369
Query: 126 DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D +WD + GH ++ + +E+G +AT + DS +++W+
Sbjct: 370 MDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD 420
Score = 173 (66.0 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 38/122 (31%), Positives = 62/122 (50%)
Query: 30 PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF 89
PD F +G D+ K+WD+++ + FPGH I ++ F NG+ AT +DD++ +L+
Sbjct: 360 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 419
Query: 90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD---FNCNVWDSMK--TERAGIL 144
D+R + DN + S+ F +SG L G D + C W + TE +G+
Sbjct: 420 DLRKLKNFKTLQLDNNF-EVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGVT 478
Query: 145 AG 146
G
Sbjct: 479 TG 480
Score = 131 (51.2 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 39/161 (24%), Positives = 71/161 (44%)
Query: 23 VMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS 81
+++L L P D ++G D + ++D T GH + +V F P+ + S
Sbjct: 224 ILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSAS 283
Query: 82 DDATCRLFDI-RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER 140
DAT R++ + A + +H++ + G++ A +G LL+ DD W +
Sbjct: 284 PDATIRIWSVPNASCVQVVRAHESAVTGLSLHA---TGDYLLSSSDD---QYWAFSDIQT 337
Query: 141 AGILAGHDNRVS-----CLGVTEDGMAVATGSWDSFLRIWN 176
+L + S C DG+ TG+ DS ++IW+
Sbjct: 338 GRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 378
>UNIPROTKB|Q08E38 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9913
"Bos taurus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005819 "spindle" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV EMBL:BC123437
IPI:IPI00702434 RefSeq:NP_001069108.1 UniGene:Bt.62928
ProteinModelPortal:Q08E38 STRING:Q08E38 PRIDE:Q08E38
Ensembl:ENSBTAT00000019100 GeneID:513868 KEGG:bta:513868 CTD:27339
HOVERGEN:HBG053697 InParanoid:Q08E38 OrthoDB:EOG4V6ZGG
NextBio:20871070 Uniprot:Q08E38
Length = 504
Score = 195 (73.7 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 43/171 (25%), Positives = 74/171 (43%)
Query: 6 DKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDI 65
DKS+ GHT V S+ P S + DA+ ++W + + SC Q HES +
Sbjct: 250 DKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAHESAV 309
Query: 66 NAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY 125
++ G + SDD DI+ + L + + C +T F G + G
Sbjct: 310 TGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGT 369
Query: 126 DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D +WD + GH ++ + +E+G +AT + DS +++W+
Sbjct: 370 MDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD 420
Score = 172 (65.6 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 38/122 (31%), Positives = 62/122 (50%)
Query: 30 PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF 89
PD F +G D+ K+WD+++ + FPGH I ++ F NG+ AT +DD++ +L+
Sbjct: 360 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 419
Query: 90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD---FNCNVWDSMK--TERAGIL 144
D+R + DN + S+ F +SG L G D + C W + TE +G+
Sbjct: 420 DLRKLKNFKTLQLDNNF-EVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLT 478
Query: 145 AG 146
G
Sbjct: 479 TG 480
Score = 131 (51.2 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 39/161 (24%), Positives = 71/161 (44%)
Query: 23 VMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS 81
+++L L P D ++G D + ++D T GH + +V F P+ + S
Sbjct: 224 ILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSAS 283
Query: 82 DDATCRLFDI-RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER 140
DAT R++ + A + +H++ + G++ A +G LL+ DD W +
Sbjct: 284 PDATIRIWSVPNASCVQVVRAHESAVTGLSLHA---TGDYLLSSSDD---QYWAFSDIQT 337
Query: 141 AGILAGHDNRVS-----CLGVTEDGMAVATGSWDSFLRIWN 176
+L + S C DG+ TG+ DS ++IW+
Sbjct: 338 GRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 378
>UNIPROTKB|E2R8L3 [details] [associations]
symbol:PRPF19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 InterPro:IPR013915
Pfam:PF08606 OMA:QWQELKV EMBL:AAEX03011680 EMBL:AAEX03011681
Ensembl:ENSCAFT00000026060 Uniprot:E2R8L3
Length = 513
Score = 195 (73.7 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 43/171 (25%), Positives = 74/171 (43%)
Query: 6 DKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDI 65
DKS+ GHT V S+ P S + DA+ ++W + + SC Q HES +
Sbjct: 259 DKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAHESAV 318
Query: 66 NAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY 125
++ G + SDD DI+ + L + + C +T F G + G
Sbjct: 319 TGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGT 378
Query: 126 DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D +WD + GH ++ + +E+G +AT + DS +++W+
Sbjct: 379 MDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD 429
Score = 172 (65.6 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 38/122 (31%), Positives = 62/122 (50%)
Query: 30 PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF 89
PD F +G D+ K+WD+++ + FPGH I ++ F NG+ AT +DD++ +L+
Sbjct: 369 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 428
Query: 90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD---FNCNVWDSMK--TERAGIL 144
D+R + DN + S+ F +SG L G D + C W + TE +G+
Sbjct: 429 DLRKLKNFKTLQLDNNF-EVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLT 487
Query: 145 AG 146
G
Sbjct: 488 TG 489
Score = 131 (51.2 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 39/161 (24%), Positives = 71/161 (44%)
Query: 23 VMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS 81
+++L L P D ++G D + ++D T GH + +V F P+ + S
Sbjct: 233 ILALDLCPADTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSAS 292
Query: 82 DDATCRLFDI-RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER 140
DAT R++ + A + +H++ + G++ A +G LL+ DD W +
Sbjct: 293 PDATIRIWSVPNASCVQVVRAHESAVTGLSLHA---TGDYLLSSSDD---QYWAFSDIQT 346
Query: 141 AGILAGHDNRVS-----CLGVTEDGMAVATGSWDSFLRIWN 176
+L + S C DG+ TG+ DS ++IW+
Sbjct: 347 GRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 387
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 193 (73.0 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 46/160 (28%), Positives = 77/160 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP-NGWA 76
GH G V S++ P F +G+ D + K+WD+ G K T GH + + + +
Sbjct: 174 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYM 233
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
F+ G DD + +D+ ++ + Y H ++ G+ +A + +LL G D C VWD
Sbjct: 234 FSAG-DDKQVKCWDLEQNKVIRSY-HGHL-SGVYCLALHPTLDVLLTGGRDSVCRVWDIR 290
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L+GHDN V + V TGS D+ ++ W+
Sbjct: 291 TKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWD 330
Score = 152 (58.6 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 40/157 (25%), Positives = 70/157 (44%)
Query: 17 SGHTGDVMSLSLAPDMRTFV-SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW 75
+GH V L+++ + T++ S D K WD+ +++ GH S + + P
Sbjct: 215 TGHIEQVRGLAVS-NRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLD 273
Query: 76 AFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNVW 133
TG D+ CR++DIR ++ A+ HDN +C + F+R + ++ G D W
Sbjct: 274 VLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSV----FTRPTDPQVVTGSHDTTIKFW 329
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDS 170
D + L H V + + A A+ S D+
Sbjct: 330 DLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADN 366
Score = 129 (50.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 36/120 (30%), Positives = 56/120 (46%)
Query: 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
A SGH V S+ P V+G+ D + K WD+R G T H+ + A+T P
Sbjct: 297 ALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKE 356
Query: 75 WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
AFA+ S D T + + + M S I I ++A + G +++ G D+ + WD
Sbjct: 357 NAFASASADNTKKFSLPKGEFCHNMLSQQKTI--INAMAVNEDG-VMVTGGDNGSIWFWD 413
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 194 (73.4 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 45/160 (28%), Positives = 78/160 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V L ++P F S + D +A+LW + + GH D++ V F PN
Sbjct: 382 GHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYL 441
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
ATGS D T RL+ + + +++ H + ++AFS +G+ L + +D +WD
Sbjct: 442 ATGSTDKTVRLWSTQQGNSVRLFTGHRG---PVLALAFSPNGKYLASAGEDQRLKLWDLA 498
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH + ++ L + D +A+ S D+ +R+W+
Sbjct: 499 SGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWD 538
Score = 151 (58.2 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH DV + P+ +G+ D + +LW + G+ + F GH + A+ F PNG
Sbjct: 423 AGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKY 482
Query: 77 FATGSDDATCRLFDIRAD---QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A+ +D +L+D+ + +EL ++ DNI TS+ FS L+ + D + VW
Sbjct: 483 LASAGEDQRLKLWDLASGTLYKELRGHT-DNI----TSLTFSPDSSLIASASMDNSVRVW 537
Query: 134 DSMKT 138
D T
Sbjct: 538 DIRNT 542
Score = 151 (58.2 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 42/171 (24%), Positives = 68/171 (39%)
Query: 6 DKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDI 65
D SA GH G V S D +S + D S + WD+R + + GH +
Sbjct: 328 DDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPV 387
Query: 66 NAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY 125
+ P FA+ S D T RL+ L +Y+ + + V F + L G
Sbjct: 388 WDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGH--LLDVDCVKFHPNSNYLATGS 445
Query: 126 DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D +W + + + GH V L + +G +A+ D L++W+
Sbjct: 446 TDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWD 496
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 193 (73.0 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 43/171 (25%), Positives = 74/171 (43%)
Query: 6 DKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDI 65
DKS+ GHT V S+ P S + DA+ ++W + + SC Q HES +
Sbjct: 250 DKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHESAV 309
Query: 66 NAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY 125
++ G + SDD DI+ + L + + C +T F G + G
Sbjct: 310 TGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGT 369
Query: 126 DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D +WD + GH ++ + +E+G +AT + DS +++W+
Sbjct: 370 MDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD 420
Score = 172 (65.6 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 38/122 (31%), Positives = 62/122 (50%)
Query: 30 PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF 89
PD F +G D+ K+WD+++ + FPGH I ++ F NG+ AT +DD++ +L+
Sbjct: 360 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 419
Query: 90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD---FNCNVWDSMK--TERAGIL 144
D+R + DN + S+ F +SG L G D + C W + TE +G+
Sbjct: 420 DLRKLKNFKTLQLDNNF-EVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLT 478
Query: 145 AG 146
G
Sbjct: 479 TG 480
Score = 130 (50.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 39/161 (24%), Positives = 71/161 (44%)
Query: 23 VMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS 81
+++L L P D ++G D + ++D T GH + +V F P+ + S
Sbjct: 224 ILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSAS 283
Query: 82 DDATCRLFDI-RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER 140
DAT R++ + A + +H++ + G++ A +G LL+ DD W +
Sbjct: 284 PDATIRIWSVPNASCVQVVRAHESAVTGLSLHA---TGDYLLSSSDD---QYWAFSDIQT 337
Query: 141 AGILAGHDNRVS-----CLGVTEDGMAVATGSWDSFLRIWN 176
+L + S C DG+ TG+ DS ++IW+
Sbjct: 338 GRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 378
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 192 (72.6 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 43/171 (25%), Positives = 73/171 (42%)
Query: 6 DKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDI 65
DKS GHT V S+ P S + DA+ ++W + + SC Q HES +
Sbjct: 250 DKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAV 309
Query: 66 NAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY 125
++ G + SDD DI+ + L + + C +T F G + G
Sbjct: 310 TGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGT 369
Query: 126 DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D +WD + GH ++ + +E+G +AT + DS +++W+
Sbjct: 370 MDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD 420
Score = 172 (65.6 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 38/122 (31%), Positives = 62/122 (50%)
Query: 30 PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF 89
PD F +G D+ K+WD+++ + FPGH I ++ F NG+ AT +DD++ +L+
Sbjct: 360 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 419
Query: 90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD---FNCNVWDSMK--TERAGIL 144
D+R + DN + S+ F +SG L G D + C W + TE +G+
Sbjct: 420 DLRKLKNFKTLQLDNNF-EVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLT 478
Query: 145 AG 146
G
Sbjct: 479 TG 480
Score = 126 (49.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 38/161 (23%), Positives = 70/161 (43%)
Query: 23 VMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS 81
+++L L P D ++G D + ++D T GH + +V F P+ + S
Sbjct: 224 ILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSAS 283
Query: 82 DDATCRLFDI-RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER 140
DAT R++ + + +H++ + G++ A +G LL+ DD W +
Sbjct: 284 PDATIRIWSVPNTSCVQVVRAHESAVTGLSLHA---TGDYLLSSSDD---QYWAFSDIQT 337
Query: 141 AGILAGHDNRVS-----CLGVTEDGMAVATGSWDSFLRIWN 176
+L + S C DG+ TG+ DS ++IW+
Sbjct: 338 GRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 378
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 192 (72.6 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 43/171 (25%), Positives = 73/171 (42%)
Query: 6 DKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDI 65
DKS GHT V S+ P S + DA+ ++W + + SC Q HES +
Sbjct: 250 DKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAV 309
Query: 66 NAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY 125
++ G + SDD DI+ + L + + C +T F G + G
Sbjct: 310 TGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGT 369
Query: 126 DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D +WD + GH ++ + +E+G +AT + DS +++W+
Sbjct: 370 MDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD 420
Score = 172 (65.6 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 38/122 (31%), Positives = 62/122 (50%)
Query: 30 PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF 89
PD F +G D+ K+WD+++ + FPGH I ++ F NG+ AT +DD++ +L+
Sbjct: 360 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 419
Query: 90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD---FNCNVWDSMK--TERAGIL 144
D+R + DN + S+ F +SG L G D + C W + TE +G+
Sbjct: 420 DLRKLKNFKTLQLDNNF-EVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLT 478
Query: 145 AG 146
G
Sbjct: 479 TG 480
Score = 126 (49.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 38/161 (23%), Positives = 70/161 (43%)
Query: 23 VMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS 81
+++L L P D ++G D + ++D T GH + +V F P+ + S
Sbjct: 224 ILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSAS 283
Query: 82 DDATCRLFDI-RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER 140
DAT R++ + + +H++ + G++ A +G LL+ DD W +
Sbjct: 284 PDATIRIWSVPNTSCVQVVRAHESAVTGLSLHA---TGDYLLSSSDD---QYWAFSDIQT 337
Query: 141 AGILAGHDNRVS-----CLGVTEDGMAVATGSWDSFLRIWN 176
+L + S C DG+ TG+ DS ++IW+
Sbjct: 338 GRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 378
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 192 (72.6 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 43/171 (25%), Positives = 73/171 (42%)
Query: 6 DKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDI 65
DKS GHT V S+ P S + DA+ ++W + + SC Q HES +
Sbjct: 250 DKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAV 309
Query: 66 NAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY 125
++ G + SDD DI+ + L + + C +T F G + G
Sbjct: 310 TGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGT 369
Query: 126 DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D +WD + GH ++ + +E+G +AT + DS +++W+
Sbjct: 370 MDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD 420
Score = 172 (65.6 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 38/122 (31%), Positives = 62/122 (50%)
Query: 30 PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF 89
PD F +G D+ K+WD+++ + FPGH I ++ F NG+ AT +DD++ +L+
Sbjct: 360 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 419
Query: 90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD---FNCNVWDSMK--TERAGIL 144
D+R + DN + S+ F +SG L G D + C W + TE +G+
Sbjct: 420 DLRKLKNFKTLQLDNNF-EVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLT 478
Query: 145 AG 146
G
Sbjct: 479 TG 480
Score = 126 (49.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 38/161 (23%), Positives = 70/161 (43%)
Query: 23 VMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS 81
+++L L P D ++G D + ++D T GH + +V F P+ + S
Sbjct: 224 ILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSAS 283
Query: 82 DDATCRLFDI-RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER 140
DAT R++ + + +H++ + G++ A +G LL+ DD W +
Sbjct: 284 PDATIRIWSVPNTSCVQVVRAHESAVTGLSLHA---TGDYLLSSSDD---QYWAFSDIQT 337
Query: 141 AGILAGHDNRVS-----CLGVTEDGMAVATGSWDSFLRIWN 176
+L + S C DG+ TG+ DS ++IW+
Sbjct: 338 GRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 378
>DICTYBASE|DDB_G0284621 [details] [associations]
symbol:pwp2 "periodic tryptophan protein"
species:44689 "Dictyostelium discoideum" [GO:0030515 "snoRNA
binding" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0284621 GO:GO:0005829 GO:GO:0005730
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364 HSSP:P16649
EMBL:AAFI02000070 KO:K14558 InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:XP_638435.1
ProteinModelPortal:Q54PE0 STRING:Q54PE0 EnsemblProtists:DDB0235358
GeneID:8624685 KEGG:ddi:DDB_G0284621 OMA:HEAPIAC
ProtClustDB:CLSZ2430232 Uniprot:Q54PE0
Length = 922
Score = 196 (74.1 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 51/164 (31%), Positives = 79/164 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP---NG 74
GH+ ++ +++ +PD +T +G D K+W+ G C TF HE + AV + P
Sbjct: 356 GHSYNMNTVAYSPDGQTIATGGEDGKVKIWNTTSGYCYITFTEHEGPVTAVKYSPVSSQN 415
Query: 75 WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAG-YDDFNCNVW 133
F+ G D T R FD+ + + N + +A SG ++ AG D F VW
Sbjct: 416 VVFSAGVD-GTIRAFDLVRYRNFRTFVSPNKT-QFSCLAVDPSGEIIAAGSLDSFEIYVW 473
Query: 134 DSMKTER-AGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
S++T R IL+GH + V L +A+ SWD +IWN
Sbjct: 474 -SVRTGRLTDILSGHQSPVCELAFDPINPFLASASWDKSCKIWN 516
Score = 114 (45.2 bits), Expect = 0.00030, P = 0.00030
Identities = 30/134 (22%), Positives = 59/134 (44%)
Query: 46 LWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSHDN 104
+W+ R + GH ++N V + P+G ATG +D ++++ + + H+
Sbjct: 342 VWEWRSETYILKQQGHSYNMNTVAYSPDGQTIATGGEDGKVKIWNTTSGYCYITFTEHEG 401
Query: 105 IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER-AGILAGHDNRVSCLGVTEDGMAV 163
+ + S + AG D +D ++ ++ + + SCL V G +
Sbjct: 402 PVTAVKYSPVSSQNVVFSAGVDG-TIRAFDLVRYRNFRTFVSPNKTQFSCLAVDPSGEII 460
Query: 164 ATGSWDSF-LRIWN 176
A GS DSF + +W+
Sbjct: 461 AAGSLDSFEIYVWS 474
Score = 114 (45.2 bits), Expect = 0.00030, P = 0.00030
Identities = 31/153 (20%), Positives = 72/153 (47%)
Query: 26 LSLAPDMRTFVSGACDA-SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA 84
L++ P +G+ D+ +W +R G GH+S + + F P A+ S D
Sbjct: 451 LAVDPSGEIIAAGSLDSFEIYVWSVRTGRLTDILSGHQSPVCELAFDPINPFLASASWDK 510
Query: 85 TCRLFDIRADQELA---MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERA 141
+C++++I D+E+ ++ D + C A+S+ G+ + D ++++ +
Sbjct: 511 SCKIWNIFEDREIRESIQHTSDVLTC-----AYSQDGKKFIVSCLDGTIQIYETSTWGQI 565
Query: 142 GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 174
G++ G ++ + G ++ +A + +F +I
Sbjct: 566 GLIDGKNDIMGGRGYKDEILAKNNSAGRAFTKI 598
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 195 (73.7 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 47/178 (26%), Positives = 84/178 (47%)
Query: 3 DHLDKSALLGSPAAS----GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF 58
DH +G P A GH+ + S++ +GA + KLWD+ + +T
Sbjct: 38 DHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTL 97
Query: 59 PGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSG 118
GH S+ +V F P G FA+GS D +++DIR ++ ++++ G+ + F+ G
Sbjct: 98 TGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIR--KKGCIHTYKGHTRGVNVLRFTPDG 155
Query: 119 RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
R +++G +D VWD + H+ ++ L +ATGS D ++ W+
Sbjct: 156 RWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWD 213
Score = 189 (71.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 49/161 (30%), Positives = 76/161 (47%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH + +S++ P F SG+ D + K+WDIR C T+ GH +N + F P+G
Sbjct: 98 TGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRW 157
Query: 77 FATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+G +D +++D+ A + L + SH+ I S+ F LL G D WD
Sbjct: 158 IVSGGEDNVVKVWDLTAGKLLHEFKSHEG---KIQSLDFHPHEFLLATGSADKTVKFWDL 214
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
E G V CL DG +V G +S L+I++
Sbjct: 215 ETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQES-LKIFS 254
Score = 158 (60.7 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 43/159 (27%), Positives = 68/159 (42%)
Query: 19 HTGDVMSLSLA-PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
H+ V L + R V+G D LW I + + GH S I++VTF +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLV 74
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
A G+ T +L+D+ + + + C SV F G +G D N +WD K
Sbjct: 75 AAGAASGTIKLWDLEEAKVVRTLTGHRSNC--VSVNFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
GH V+ L T DG + +G D+ +++W+
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWD 171
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 193 (73.0 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 48/160 (30%), Positives = 81/160 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V L ++ D T +SG+ D + ++WD+R G+C+ GH++ + + +G
Sbjct: 330 GHTSTVRCLKMS-DKNTAISGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLAV--HGDIV 386
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+GS D T R++ I + L A+ H I ++AF GR + G D + +WD
Sbjct: 387 VSGSYDTTARVWSISEGRFLRALSGH---FSQIYAIAFD--GRRIATGSLDTSVRIWDPN 441
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ IL GH + V L ++ D + TG D +R+W+
Sbjct: 442 TGQCHAILQGHTSLVGQLQMSGD--TLVTGGSDGSVRVWS 479
Score = 170 (64.9 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 51/160 (31%), Positives = 76/160 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V L++ D+ VSG+ D +A++W I +G + GH S I A+ F +G
Sbjct: 371 GHQASVRCLAVHGDI--VVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAF--DGRRI 426
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVA--FSRSGRLLLAGYDDFNCNVWDS 135
ATGS D + R++D Q H I+ G TS+ SG L+ G D + VW
Sbjct: 427 ATGSLDTSVRIWDPNTGQ-----CHA-ILQGHTSLVGQLQMSGDTLVTGGSDGSVRVWSL 480
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ LA HDN V+ L D + +G D +++W
Sbjct: 481 TRMAPIHRLAAHDNSVTSLQF--DNNRIVSGGSDGRVKVW 518
Score = 157 (60.3 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 21 GDVMSL-SLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFAT 79
G VM + ++ P VSG CD ++W++ G GH S + + A +
Sbjct: 290 GHVMGVWAMVPWDNILVSGGCDREVRVWNMATGESIYLLRGHTSTVRCLKMSDKNTAIS- 348
Query: 80 GSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT 138
GS D T R++D+R + H + +A G ++++G D VW +
Sbjct: 349 GSRDTTLRIWDLRTGTCRSVLVGHQ---ASVRCLAVH--GDIVVSGSYDTTARVWSISEG 403
Query: 139 ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L+GH +++ + DG +ATGS D+ +RIW+
Sbjct: 404 RFLRALSGHFSQIYAIAF--DGRRIATGSLDTSVRIWD 439
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 192 (72.6 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 49/173 (28%), Positives = 80/173 (46%)
Query: 5 LDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD 64
L KS+L+G HT V +S++P +S + D +LW S + GH +
Sbjct: 394 LQKSSLIG------HTRPVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAP 447
Query: 65 INAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLA 123
I V F P G+ FAT S D T RL+D+ L ++ H N + V+F + L
Sbjct: 448 IWDVQFSPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQN---DVDCVSFHPNAAYLAT 504
Query: 124 GYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
G D +WD + H + VS L ++ DG+++A+ +++W+
Sbjct: 505 GSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWD 557
Score = 191 (72.3 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 42/161 (26%), Positives = 80/161 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH + + +P F + + D +A+LWD+ + + F GH++D++ V+F PN
Sbjct: 442 AGHNAPIWDVQFSPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAY 501
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNC-NVWDS 135
ATGS D T R++D+R + +++ + ++++ S G L LA D+ VWD
Sbjct: 502 LATGSSDHTTRMWDVRTGGTVRVFNAHH--SPVSALCMSADG-LSLASADESGIIKVWDL 558
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + H + V L + D + +G D+ + W+
Sbjct: 559 RSSNQHVSFVKHSSIVYSLSFSYDNKILVSGGADTDVNFWD 599
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 190 (71.9 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 45/160 (28%), Positives = 79/160 (49%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V L ++P F S + D +A+LW + + GH + ++ V F PN
Sbjct: 379 GHAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYL 438
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICG-ITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
ATGS D T RL+ + + +++ CG + +AFS +G+ L++ +D +WD
Sbjct: 439 ATGSTDKTVRLWSAQQGNSVRLFTGH---CGPVRCLAFSPNGQYLVSAGEDQLLKLWDLA 495
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L GH + ++ + + D +A+ S D+ +RIW+
Sbjct: 496 SGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWD 535
Score = 174 (66.3 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 40/159 (25%), Positives = 67/159 (42%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH G V S PD +S + D S + WD+ + + GH + + P+ F
Sbjct: 337 GHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSLFF 396
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
A+ S D T RL+ L +Y+ + G+ V F + L G D +W + +
Sbjct: 397 ASASYDHTARLWSFDRTYPLRIYAGH--LAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 454
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ GH V CL + +G + + D L++W+
Sbjct: 455 GNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWD 493
Score = 137 (53.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 37/159 (23%), Positives = 69/159 (43%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH V + P+ +G+ D + +LW + G+ + F GH + + F PNG
Sbjct: 420 AGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQY 479
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+ +D +L+D+ + ++ H + ITSV FS ++ + D + +WD
Sbjct: 480 LVSAGEDQLLKLWDLASGTLYKDLHGHTD---DITSVTFSLDSSVIASASMDNSVRIWD- 535
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 174
I + H N G + + + V TG + L +
Sbjct: 536 -------IKSKH-NSTPADGSSSELLGVYTGQMSTVLNV 566
Score = 131 (51.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH G V L+ +P+ + VS D KLWD+ G+ + GH DI +VTF +
Sbjct: 462 TGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSV 521
Query: 77 FATGSDDATCRLFDIR-------AD----QELAMYSHDNIICGITSVAFSRSGRLLLAGY 125
A+ S D + R++DI+ AD + L +Y+ + + +V F RLL+ G
Sbjct: 522 IASASMDNSVRIWDIKSKHNSTPADGSSSELLGVYTGQ--MSTVLNVQFMAGSRLLVTGI 579
Query: 126 DDFN 129
+ N
Sbjct: 580 REEN 583
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 188 (71.2 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 45/161 (27%), Positives = 76/161 (47%)
Query: 16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW 75
ASGHTG V ++ + P + F SG D K+WD+ G K + GH S + AV P
Sbjct: 180 ASGHTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHP 239
Query: 76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+G +D + +D+ ++ + Y H ++ + +++ S +L+ D VWD
Sbjct: 240 FLFSGGEDKQVKCWDLEYNKVIRHY-HGHL-SAVQALSVHPSLDVLVTCARDSTARVWDM 297
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ AGH N V+ + V T S D+ +R+W+
Sbjct: 298 RTKAQVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWD 338
Score = 152 (58.6 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 47/161 (29%), Positives = 76/161 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V +LS+ P + V+ A D++A++WD+R + F GH + + V
Sbjct: 266 GHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQSVDPQV 325
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSV-AFSRSGRL-LLAGYDDFNCNVWDS 135
T S DAT RL+D+ A + + +H SV A + RL + A N W
Sbjct: 326 ITASHDATVRLWDLAAGRSMCTLTHHK-----KSVRALTIHPRLNMFASASPDNIKQWKL 380
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K E L+GH+ ++ L +DG+ V+ G+ + L W+
Sbjct: 381 PKGEFMQNLSGHNAIINTLSSNDDGVVVS-GADNGSLCFWD 420
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 143 (55.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 36/154 (23%), Positives = 72/154 (46%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD 82
+ + +L+P+ + G + K + I D S + + GHE IN + +G A+ S
Sbjct: 90 ISTFALSPNNEEILIGCSNLQIKQYRIEDQSLVKIWKGHEGPINEIDIHSSGNIVASASS 149
Query: 83 DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG 142
D T +++D+ + HD+++ T + F + L+ D N V+D + T+
Sbjct: 150 DKTVKVWDLEKGYCTHNFQHDDVV---TMLKFHPTLLKLVTVCLDLNIRVYD-LVTKECV 205
Query: 143 ILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
IL H +++S + + G + + D L +W+
Sbjct: 206 ILTNHLSQISGITFSNSGKELISSGRDKVLNVWD 239
Score = 139 (54.0 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 33/119 (27%), Positives = 55/119 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH G + + + S + D + K+WD+ G C F H+ + + F P
Sbjct: 127 GHEGPINEIDIHSSGNIVASASSDKTVKVWDLEKGYCTHNFQ-HDDVVTMLKFHPTLLKL 185
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
T D R++D+ + + + +H + I GIT FS SG+ L++ D NVWD +
Sbjct: 186 VTVCLDLNIRVYDLVTKECVILTNHLSQISGIT---FSNSGKELISSGRDKVLNVWDML 241
Score = 138 (53.6 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 40/171 (23%), Positives = 74/171 (43%)
Query: 6 DKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDI 65
DK + S H D+ S+S+AP+ + F + + D+ KLW++ + + H +
Sbjct: 514 DKK-ISASVTKIAHEKDINSISIAPNDKIFATASQDSYVKLWNVNNLEPITSIKAHRRGV 572
Query: 66 NAVTFFPNGWAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAG 124
V F P F T S D T +++ + L + H + + ++F G +++
Sbjct: 573 WHVEFSPIDQCFLTCSADGTIKIWSLSDYTCLKTLEGHKGSVLKASFISF---GMQIVSV 629
Query: 125 YDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ +W+ E GH++++ L V +D TG DS L W
Sbjct: 630 ASEGLIKLWNIKTNECLNTFEGHESKIWALSVAKDQERFITGGSDSKLIAW 680
Score = 114 (45.2 bits), Expect = 0.00029, P = 0.00029
Identities = 37/144 (25%), Positives = 61/144 (42%)
Query: 34 TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA 93
T SG D+ K I S T HE DIN+++ PN FAT S D+ +L+++
Sbjct: 502 TSSSGGDDSKKKDKKI---SASVTKIAHEKDINSISIAPNDKIFATASQDSYVKLWNVNN 558
Query: 94 DQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVS 152
+ + ++ +H G+ V FS + L D +W L GH V
Sbjct: 559 LEPITSIKAHRR---GVWHVEFSPIDQCFLTCSADGTIKIWSLSDYTCLKTLEGHKGSVL 615
Query: 153 CLGVTEDGMAVATGSWDSFLRIWN 176
GM + + + + +++WN
Sbjct: 616 KASFISFGMQIVSVASEGLIKLWN 639
Score = 79 (32.9 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ T+RA +L GH++ V + V+ DG + +GS D IW+
Sbjct: 412 LNTKRAQVLRGHEDLVMSVDVSADGKHIISGSRDKSAMIWD 452
Score = 46 (21.3 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 127 DFNCNVWDSMKTERAGILAGHDNRVSCLG-VTEDGMAVATGS 167
+ N +++ ER G + G+++ + + + +D + VAT S
Sbjct: 363 EHNLLIYNGKTLERQGEIIGYNDEIIDIKYINDDNIIVATNS 404
>UNIPROTKB|Q5ZMA2 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339 HOVERGEN:HBG053697
EMBL:AJ719482 IPI:IPI00598799 RefSeq:NP_001034420.1
UniGene:Gga.8361 ProteinModelPortal:Q5ZMA2 STRING:Q5ZMA2
PRIDE:Q5ZMA2 GeneID:430767 KEGG:gga:430767 NextBio:20830569
Uniprot:Q5ZMA2
Length = 505
Score = 188 (71.2 bits), Expect = 6.6e-14, P = 6.6e-14
Identities = 41/171 (23%), Positives = 74/171 (43%)
Query: 6 DKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDI 65
DKS+ GH+ V S+ P S + DA+ ++W + + SC Q HE +
Sbjct: 251 DKSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHEGSV 310
Query: 66 NAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY 125
++ G + SDD DI+ + L + ++ C +T F G + G
Sbjct: 311 TGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDESSGCALTCAQFHPDGLIFGTGT 370
Query: 126 DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D +WD + GH ++ + +E+G +AT + DS +++W+
Sbjct: 371 MDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD 421
Score = 172 (65.6 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 38/122 (31%), Positives = 62/122 (50%)
Query: 30 PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF 89
PD F +G D+ K+WD+++ + FPGH I ++ F NG+ AT +DD++ +L+
Sbjct: 361 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 420
Query: 90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD---FNCNVWDSMK--TERAGIL 144
D+R + DN + S+ F +SG L G D + C W + TE +G+
Sbjct: 421 DLRKLKNFKTLQLDNNF-EVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLT 479
Query: 145 AG 146
G
Sbjct: 480 TG 481
Score = 127 (49.8 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 39/161 (24%), Positives = 73/161 (45%)
Query: 23 VMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS 81
+++L L P D ++G D + ++D T GH + +V F P+ + S
Sbjct: 225 ILALDLCPSDTNKILTGGADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQDLVFSAS 284
Query: 82 DDATCRLFDI-RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW--DSMKT 138
DAT R++ + A + +H+ + G++ A +G LL+ DD W ++T
Sbjct: 285 PDATIRIWSVPNASCVQVVRAHEGSVTGLSLHA---TGDYLLSSSDD---QYWAFSDIQT 338
Query: 139 ERAGILAGHDNR---VSCLGVTEDGMAVATGSWDSFLRIWN 176
R ++ ++C DG+ TG+ DS ++IW+
Sbjct: 339 GRVLTKVTDESSGCALTCAQFHPDGLIFGTGTMDSQIKIWD 379
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 190 (71.9 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 47/159 (29%), Positives = 76/159 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + SL P SG+ D++ KLWD+R C + GH + + F P+G
Sbjct: 103 GHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWL 162
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+ SDD+T +L+D+ A + + + SH + + V F + LL +G D +WD
Sbjct: 163 ASASDDSTVKLWDLIAGKMITEFTSHTS---AVNVVQFHPNEYLLASGSADRTVKLWDLE 219
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
K G G V + DG + +GS ++ LR++
Sbjct: 220 KFNMIGSSEGETGVVRSVLFNPDGSCLYSGS-ENTLRVY 257
Score = 182 (69.1 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 40/160 (25%), Positives = 79/160 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT V + V+G+ S +LWD+ +T GH++ I+++ F P G
Sbjct: 60 TGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEY 119
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+GS D+ +L+D+R ++ ++ + + +AFS G+ L + DD +WD +
Sbjct: 120 LASGSVDSNIKLWDVR--RKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLI 177
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ H + V+ + + +A+GS D +++W+
Sbjct: 178 AGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWD 217
Score = 169 (64.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 44/160 (27%), Positives = 71/160 (44%)
Query: 19 HTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
H+ +V SL L R +G D +W + +C + GH S + + F +
Sbjct: 19 HSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERV 78
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
GS + RL+D+ A + L + H I+S+ F G L +G D N +WD
Sbjct: 79 VAGSLSGSLRLWDLEAAKILRTLMGHK---ASISSLDFHPMGEYLASGSVDSNIKLWDVR 135
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ GH V CL + DG +A+ S DS +++W+
Sbjct: 136 RKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWD 175
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 184 (69.8 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 47/161 (29%), Positives = 77/161 (47%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
SGH G ++ L + D S + D WD+ G + + GHE IN++ G
Sbjct: 100 SGHRGAILDLQWSRDSDIIFSASADMHLASWDLTTGERIRRYVGHEEVINSLDISKRGEE 159
Query: 77 FA-TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+GSDD T ++D R + A Y + +T+VA S +G + +G D + VWD
Sbjct: 160 ILFSGSDDGTIGIWDPRK-KHAADYIESDF--PVTAVAISEAGNEIYSGGIDNDIKVWDV 216
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K +AGH + ++ L V+ D ++ + + DS R W+
Sbjct: 217 RKKAVVYNMAGHRDTITTLKVSPDSQSLLSYAMDSTARTWD 257
Score = 141 (54.7 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 39/164 (23%), Positives = 73/164 (44%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ--TFPGHESDINAVTFFPNG 74
SGH+G++ + SG+ D S LW +G C+ GH I + + +
Sbjct: 57 SGHSGEIFCAKFNSAGQYIASGSMDRSILLWRA-NGDCENYGILSGHRGAILDLQWSRDS 115
Query: 75 WAFATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGR-LLLAGYDDFNCNV 132
+ S D +D+ + + Y H+ +I S+ S+ G +L +G DD +
Sbjct: 116 DIIFSASADMHLASWDLTTGERIRRYVGHEEVI---NSLDISKRGEEILFSGSDDGTIGI 172
Query: 133 WDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
WD K A + D V+ + ++E G + +G D+ +++W+
Sbjct: 173 WDPRKKHAADYIES-DFPVTAVAISEAGNEIYSGGIDNDIKVWD 215
Score = 109 (43.4 bits), Expect = 0.00036, P = 0.00036
Identities = 36/159 (22%), Positives = 66/159 (41%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD 82
V +++++ SG D K+WD+R + GH I + P+ + + +
Sbjct: 190 VTAVAISEAGNEIYSGGIDNDIKVWDVRKKAVVYNMAGHRDTITTLKVSPDSQSLLSYAM 249
Query: 83 DATCRLFDIR--ADQELAMYSHDNIICGITSV----AFSRSGRLLLAGYDDFNCNVWDSM 136
D+T R +DIR A E + + D GI + + G+ + G D +W +
Sbjct: 250 DSTARTWDIRPFAPTERHIRTFDGAPMGIEKNLVRGGWDKEGKRVAMGAADGTVVIWSNE 309
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMA-VATGSWDSFLRI 174
+ L GH V+C+ + + +GS D L +
Sbjct: 310 TGKLTYKLPGHKAAVNCVEFSPGTEPLILSGSSDKTLLV 348
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 189 (71.6 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 48/161 (29%), Positives = 84/161 (52%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V +P F S + D +A++W + + GH SD++ V + PN
Sbjct: 458 GHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYI 517
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
ATGS D T RL+D++ + + ++ H +++ S+A S GR + +G +D +WD +
Sbjct: 518 ATGSSDKTVRLWDVQTGECVRIFIGHRSMVL---SLAMSPDGRYMASGDEDGTIMMWD-L 573
Query: 137 KTERAGI-LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
T R L GH++ V L + +G +A+GS D +++W+
Sbjct: 574 STARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWD 614
Score = 180 (68.4 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 41/142 (28%), Positives = 74/142 (52%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH DV + P+ +G+ D + +LWD++ G C + F GH S + ++ P+G
Sbjct: 499 AGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRY 558
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD- 134
A+G +D T ++D+ + + + H++ C + S+++S G LL +G D +WD
Sbjct: 559 MASGDEDGTIMMWDLSTARCITPLMGHNS--C-VWSLSYSGEGSLLASGSADCTVKLWDV 615
Query: 135 --SMKTERAGILAGHDNRVSCL 154
S K +A G+ NR+ L
Sbjct: 616 TSSTKLTKAEEKNGNSNRLRSL 637
Score = 160 (61.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 42/160 (26%), Positives = 71/160 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+G V S + +P +S + D + +LW + + + GH + F P G F
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYF 475
Query: 78 ATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+ S D T R++ + Q L M H + + V + + + G D +WD
Sbjct: 476 ASCSHDRTARIWSMDRIQPLRIMAGH---LSDVDCVQWHPNCNYIATGSSDKTVRLWDVQ 532
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
E I GH + V L ++ DG +A+G D + +W+
Sbjct: 533 TGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWD 572
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 174 (66.3 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 42/160 (26%), Positives = 73/160 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V +S++P+ R + + D + K+W + T GH I+ V +
Sbjct: 52 GHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYL 111
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+ SDD T R++D + + H N + +S+ F+ G LL++G D +W+
Sbjct: 112 ASASDDKTIRIWDFEKRCSVRCLKGHTNYV---SSIDFNPLGTLLVSGSWDETVRIWNLQ 168
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+L H + + ++ DG AT S+D RIW+
Sbjct: 169 DGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWD 208
Score = 163 (62.4 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 38/121 (31%), Positives = 56/121 (46%)
Query: 57 TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFS 115
T GHE + V+ PN AT S D T +++ + E ++ H GI+ V ++
Sbjct: 49 TLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYR---GISQVKWA 105
Query: 116 RSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ L + DD +WD K L GH N VS + G + +GSWD +RIW
Sbjct: 106 TGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIW 165
Query: 176 N 176
N
Sbjct: 166 N 166
Score = 154 (59.3 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 36/132 (27%), Positives = 64/132 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V S+ P VSG+ D + ++W+++DG+C + P H I +V+ +G
Sbjct: 136 GHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLC 195
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
AT S D R++D+ + Q L + I ++++ F+ + + LL + +WD +
Sbjct: 196 ATASYDGMARIWDVLSGQCLKTLV-EPINVPLSNLQFTENRKYLLVSNLNSQIRLWDYRR 254
Query: 138 TERAGILAGHDN 149
I H N
Sbjct: 255 NRVVRIFDSHVN 266
Score = 51 (23.0 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 148 DNRVSCLGVTEDGMAVATGSWDSFLRIW 175
D S L VT G + T D ++R+W
Sbjct: 337 DPETSLLNVTSLGPFIITSGTDPYVRVW 364
>FB|FBgn0033557 [details] [associations]
symbol:CG12325 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0022008
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 KO:K14558 OMA:VWQCDTP
InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 EMBL:BT016114 RefSeq:NP_610618.1 UniGene:Dm.12871
SMR:Q5U0X8 STRING:Q5U0X8 EnsemblMetazoa:FBtr0088227 GeneID:36144
KEGG:dme:Dmel_CG12325 UCSC:CG12325-RA FlyBase:FBgn0033557
InParanoid:Q5U0X8 OrthoDB:EOG4SN03M GenomeRNAi:36144 NextBio:797070
Uniprot:Q5U0X8
Length = 949
Score = 191 (72.3 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 46/163 (28%), Positives = 80/163 (49%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ ++ ++ + D + +G D+ KLW+ + C TF H S + + F N
Sbjct: 391 GHSSEMTCIAYSSDGQFIATGGEDSKVKLWNTQSSFCFVTFSEHTSGVTGIQFSRNKKFL 450
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD-FNCNVWDSM 136
+ S D T R FD+ + ++ N + VA SG L++AG D F+ +W S+
Sbjct: 451 VSSSLDGTVRAFDVNRYRNFRTFTSPNP-AQFSCVAVDYSGELVVAGGQDVFDIFLW-SV 508
Query: 137 KTERA-GILAGHDNRVSCLGVTE--DGMAVATGSWDSFLRIWN 176
KT + I++GH+ V + + + +GSWD ++IWN
Sbjct: 509 KTGKLLEIISGHEGPVVSIAFSPVATSSTLVSGSWDKTVKIWN 551
Score = 116 (45.9 bits), Expect = 0.00016, P = 0.00016
Identities = 28/95 (29%), Positives = 48/95 (50%)
Query: 17 SGHTGDVMSLSLAP--DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
SGH G V+S++ +P T VSG+ D + K+W+ + + + SD+ VTF P+G
Sbjct: 518 SGHEGPVVSIAFSPVATSSTLVSGSWDKTVKIWNCLESNSEHETIDAVSDVTNVTFSPSG 577
Query: 75 WAFATGSDDATCRLFDIR-ADQELAMYSHDNIICG 108
A + +FDI+ A Q + +++ G
Sbjct: 578 EEIAVATLSGNITIFDIKSAGQVTTIEGRNDLSAG 612
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 182 (69.1 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 43/160 (26%), Positives = 74/160 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V + + + + SG+ D++ +W ++ S F GH+ + V F P+G
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+GS D T R++ E ++ +H + SV F G+LL+ DD VW +
Sbjct: 77 ASGSRDKTVRIWVPNVKGESTVFRAHT---ATVRSVHFCSDGQLLVTASDDKTVKVWSTH 133
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L H N V C + DG + + S D +++W+
Sbjct: 134 RQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Score = 159 (61.0 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 39/157 (24%), Positives = 65/157 (41%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
H V +PD R VS + D + KLWD C ++ H + V F P+G A
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIA 203
Query: 79 TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT 138
D T +++D R + + Y + + +++F SG L+ D + D M+
Sbjct: 204 AAGMDNTVKVWDTRTHRLVQHYQLHS--AAVNALSFHPSGNYLITASSDSTLKILDLMEG 261
Query: 139 ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L GH + + + G A+G D + +W
Sbjct: 262 RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 153 (58.9 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 37/160 (23%), Positives = 67/160 (41%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH V ++ +P SG+ D + ++W F H + + +V F +G
Sbjct: 58 TGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQL 117
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
T SDD T +++ + L +S I + FS GRL+++ DD +WD
Sbjct: 118 LVTASDDKTVKVWSTHRQRFL--FSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
E H V+ + G +A D+ +++W+
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD 215
Score = 145 (56.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 35/118 (29%), Positives = 55/118 (46%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
H G V + P + D + K+WD R Q + H + +NA++F P+G
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLI 245
Query: 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
T S D+T ++ D+ + L ++ H T+VAFSR+G +G D VW S
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQG---PATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 129 (50.5 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 35/128 (27%), Positives = 59/128 (46%)
Query: 51 DGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS-HDNIICGI 109
D S ++ F GH + V F N A+GS D+T ++ ++ ++ H + +
Sbjct: 8 DPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKD---AV 64
Query: 110 TSVAFSRSGRLLLAGYDDFNCNVW-DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW 168
T V FS SG LL +G D +W ++K E + H V + DG + T S
Sbjct: 65 TCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVHFCSDGQLLVTASD 123
Query: 169 DSFLRIWN 176
D +++W+
Sbjct: 124 DKTVKVWS 131
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 190 (71.9 bits), Expect = 9.4e-14, P = 9.4e-14
Identities = 47/178 (26%), Positives = 84/178 (47%)
Query: 3 DHLDKSALLGSPAAS----GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF 58
DH +G P A GH+ + S++ +GA + KLWD+ + +T
Sbjct: 38 DHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTL 97
Query: 59 PGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSG 118
GH S+ +V F P G FA+GS D +++DIR ++ ++++ G+ + F+ G
Sbjct: 98 TGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR--KKGCIHTYKGHTRGVNVLRFTPDG 155
Query: 119 RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
R +++G +D VWD + H+ ++ L +ATGS D ++ W+
Sbjct: 156 RWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWD 213
Score = 187 (70.9 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 49/161 (30%), Positives = 74/161 (45%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH + +S+ P F SG+ D + K+WDIR C T+ GH +N + F P+G
Sbjct: 98 TGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRW 157
Query: 77 FATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+G +D +++D+ A + L + SH+ I S+ F LL G D WD
Sbjct: 158 VVSGGEDNIVKVWDLTAGKLLTEFKSHEG---QIQSLDFHPHEFLLATGSADRTVKFWDL 214
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
E G V CL DG V G +S L+I++
Sbjct: 215 ETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQES-LKIFS 254
Score = 157 (60.3 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 44/159 (27%), Positives = 68/159 (42%)
Query: 19 HTGDVMSLSLA-PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
H+ V L + R V+G D LW I + + GH S I++VTF +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
A G+ T +L+D+ + + + C SV F G +G D N +WD K
Sbjct: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNC--ISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
GH V+ L T DG V +G D+ +++W+
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWD 171
>FB|FBgn0011569 [details] [associations]
symbol:can "cannonball" species:7227 "Drosophila
melanogaster" [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0007141 "male meiosis I" evidence=IMP] [GO:0048515 "spermatid
differentiation" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0005669 "transcription factor TFIID
complex" evidence=ISS] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=ISS]
[GO:0007126 "meiosis" evidence=TAS] [GO:0007286 "spermatid
development" evidence=IMP;TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0001673
"male germ cell nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0005730 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007286 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001673 GO:GO:0006367 GO:GO:0010468
GO:GO:0007141 HSSP:P16649 GO:GO:0005669
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:AF346730
RefSeq:NP_524827.1 UniGene:Dm.1796 SMR:Q9VT91 IntAct:Q9VT91
MINT:MINT-834439 STRING:Q9VT91 EnsemblMetazoa:FBtr0076299
GeneID:45432 KEGG:dme:Dmel_CG6577 UCSC:CG6577-RA CTD:12329
FlyBase:FBgn0011569 InParanoid:Q9VT91 OMA:RIWDIVK OrthoDB:EOG4F4QS8
GenomeRNAi:45432 NextBio:838153 Uniprot:Q9VT91
Length = 942
Score = 190 (71.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 46/160 (28%), Positives = 78/160 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH G V S P+ R ++ + D S +LW + SC F GH + + V F P G+ F
Sbjct: 624 GHQGPVYGCSFNPEDRFLITCSEDFSVRLWCLLSWSCVVIFSGHLAPVCFVVFAPRGYYF 683
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNII-CGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
AT SDD T R++ ++ + + A ++ G+ F + + G D +WD +
Sbjct: 684 ATASDDCTARVW-MQDNTKPARILQGHLAELGVC--LFHPNRHYMATGSADCTVRIWDIV 740
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K + I GH +R++ L + G + +G D+ + IW+
Sbjct: 741 KAVQVRIFRGHKSRITALIYSICGRYLVSGGDDNLIMIWD 780
Score = 167 (63.8 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 44/161 (27%), Positives = 74/161 (45%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
SGH V + AP F + + D +A++W + + GH +++ F PN
Sbjct: 665 SGHLAPVCFVVFAPRGYYFATASDDCTARVWMQDNTKPARILQGHLAELGVCLFHPNRHY 724
Query: 77 FATGSDDATCRLFDI-RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
ATGS D T R++DI +A Q H + IT++ +S GR L++G DD +WD+
Sbjct: 725 MATGSADCTVRIWDIVKAVQVRIFRGHKS---RITALIYSICGRYLVSGGDDNLIMIWDT 781
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
H ++ + ++ D + G D L +W+
Sbjct: 782 ANEILMQFFDHHKASINTMEISLDNNILVVGGQDCQLTLWD 822
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 186 (70.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 51/177 (28%), Positives = 87/177 (49%)
Query: 7 KSALLGSPAASGHTGDVMSLSLAPDMRT-FVSGACDASAKLWDIRDGSCKQTFPGHESDI 65
K S A +GH ++ + AP + V+GA D +A++WD + T GH + +
Sbjct: 130 KPVTRSSSAIAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWV 189
Query: 66 NAVTFFPNGWAFATGSDDATCRLFDIRADQEL--AMYSHDNIICGIT--SVAFSRSGRL- 120
V++ P+G ATGS D T RL+D ++ Q L A+ H I ++ + + G
Sbjct: 190 LCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKP 249
Query: 121 -LLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L + D +WD++ ++GH N VSC+ G+ + +GS D +R+W+
Sbjct: 250 RLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGL-LYSGSHDRTVRVWD 305
Score = 143 (55.4 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 39/143 (27%), Positives = 71/143 (49%)
Query: 36 VSGACDASAKLWD-IRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94
V+ + D + LW+ ++ GH+ +N V F P+G + S D + +L+D R
Sbjct: 375 VTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDG 434
Query: 95 QELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI-LAGHDNRVS 152
+ ++ + H + + VA+S RLL++ D VWD ++T + + L GH + V
Sbjct: 435 KFISTFRGH---VASVYQVAWSSDCRLLVSCSKDTTLKVWD-VRTRKLSVDLPGHKDEVY 490
Query: 153 CLGVTEDGMAVATGSWDSFLRIW 175
+ + DG V +G D +R+W
Sbjct: 491 TVDWSVDGKRVCSGGKDKMVRLW 513
Score = 128 (50.1 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 34/118 (28%), Positives = 59/118 (50%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH V ++ +PD R VS + D S KLWD RDG TF GH + + V + +
Sbjct: 399 TGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRL 458
Query: 77 FATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
+ S D T +++D+R + + + H + + +V +S G+ + +G D +W
Sbjct: 459 LVSCSKDTTLKVWDVRTRKLSVDLPGHKD---EVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 127 (49.8 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 37/163 (22%), Positives = 76/163 (46%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD-GSCKQTFPGHESDINAVTFFPNGW 75
SGHT V + + SG+ D + ++WDI G C H +N ++ + +
Sbjct: 275 SGHTNSVSCVKWGGQGLLY-SGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTD-Y 332
Query: 76 AFATGSDDATCRLFDIRAD-QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
A G+ D T + + Q+ A+ +++ I C S +++ DD+ +W+
Sbjct: 333 ALRIGAFDHTGKKPSTPEEAQKKALENYEKI-CKKNG----NSEEMMVTASDDYTMFLWN 387
Query: 135 SMK-TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+K T+ + GH V+ + + DG + + S+D+ +++W+
Sbjct: 388 PLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWD 430
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 180 (68.4 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 43/159 (27%), Positives = 68/159 (42%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
S H V +PD R S + D + KLWD C +F H N V F P+G
Sbjct: 143 SQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTC 202
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A D T +++D+R ++ L Y + S++F SG L+ +D + D +
Sbjct: 203 IAAAGTDKTVKVWDVRMNRLLQHYQVHT--AAVNSLSFHPSGNYLITASNDSTLKILDLL 260
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ L GH +C+ + G A+G D + +W
Sbjct: 261 EGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
Score = 170 (64.9 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 42/159 (26%), Positives = 72/159 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + S+ + + + SG+ D+ K+W ++ GH+ + V F P+G
Sbjct: 18 GHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLV 77
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
A+GS D T L+ E ++ + SV FS G+ L+ DD VW +
Sbjct: 78 ASGSRDKTVCLWVPSVKGESTVFKAHTAT--VRSVHFSSDGQSLVTASDDKTIKVWTVHR 135
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L+ H N V C + DG +A+ S D +++W+
Sbjct: 136 QKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWD 174
Score = 149 (57.5 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 38/159 (23%), Positives = 64/159 (40%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH VM + +P SG+ D + LW F H + + +V F +G +
Sbjct: 60 GHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSL 119
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
T SDD T +++ + + L +S I + FS GRL+ + DD +WD
Sbjct: 120 VTASDDKTIKVWTVHRQKFL--FSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTS 177
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
E H + + G +A D +++W+
Sbjct: 178 RECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWD 216
Score = 129 (50.5 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 45/177 (25%), Positives = 72/177 (40%)
Query: 6 DKSALLGSPAASG-------HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF 58
DK+ L P+ G HT V S+ + D ++ V+ + D + K+W + +
Sbjct: 83 DKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSL 142
Query: 59 PGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITS-VAFSRS 117
H + + F P+G A+ SDD T +L+D + + + + G + V F S
Sbjct: 143 SQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHG---GFANHVEFHPS 199
Query: 118 GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 174
G + A D VWD H V+ L G + T S DS L+I
Sbjct: 200 GTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKI 256
Score = 128 (50.1 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 36/128 (28%), Positives = 61/128 (47%)
Query: 51 DGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL-AMYSH-DNIICG 108
D S ++ F GH I +V F N A+GS D+ +++ ++ + H D ++C
Sbjct: 9 DPSLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMC- 67
Query: 109 ITSVAFSRSGRLLLAGYDDFNCNVW-DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGS 167
V FS SG L+ +G D +W S+K E + H V + + DG ++ T S
Sbjct: 68 ---VQFSPSGHLVASGSRDKTVCLWVPSVKGEST-VFKAHTATVRSVHFSSDGQSLVTAS 123
Query: 168 WDSFLRIW 175
D +++W
Sbjct: 124 DDKTIKVW 131
>TAIR|locus:2157762 [details] [associations]
symbol:AT5G50230 "AT5G50230" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:BT011244 EMBL:BT020329 IPI:IPI00518229
RefSeq:NP_199834.2 UniGene:At.29744 ProteinModelPortal:Q6NNP0
SMR:Q6NNP0 PRIDE:Q6NNP0 EnsemblPlants:AT5G50230.1 GeneID:835088
KEGG:ath:AT5G50230 TAIR:At5g50230 InParanoid:Q6NNP0
PhylomeDB:Q6NNP0 ProtClustDB:CLSN2681670 Genevestigator:Q6NNP0
Uniprot:Q6NNP0
Length = 509
Score = 185 (70.2 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 55/169 (32%), Positives = 87/169 (51%)
Query: 17 SGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW 75
+GHT V ++ ++ R VS A D + KLWD+ G C T S+ NA+ +G
Sbjct: 306 TGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVL-FTSNCNAICLSIDGL 364
Query: 76 AFATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVW 133
+G D RL+DI+ + L+ + H + +TSV+ SR+G R+L +G D+ + NV+
Sbjct: 365 TVFSGHMDGNLRLWDIQTGKLLSEVAGHSS---AVTSVSLSRNGNRILTSGRDNVH-NVF 420
Query: 134 DSMKTERAGILAGHDNRV------SCLGVTEDGMAVATGSWDSFLRIWN 176
D+ E G L NR+ SC+ +D VA GS D + +W+
Sbjct: 421 DTRTLEICGTLRASGNRLASNWSRSCISPDDD--YVAAGSADGSVHVWS 467
Score = 129 (50.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 33/163 (20%), Positives = 73/163 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP-NGWA 76
G G+++ +++ D ++ ++ + +WD+ G + T GH + AV +
Sbjct: 265 GSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRH 324
Query: 77 FATGSDDATCRLFDIR---ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
+ + D T +L+D+ + S+ N IC S G + +G+ D N +W
Sbjct: 325 VVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAIC------LSIDGLTVFSGHMDGNLRLW 378
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D + +AGH + V+ + ++ +G + T D+ +++
Sbjct: 379 DIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFD 421
Score = 122 (48.0 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 37/158 (23%), Positives = 63/158 (39%)
Query: 20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFAT 79
T + ++ L+ D T SG D + +LWDI+ G GH S + +V+ NG T
Sbjct: 351 TSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILT 410
Query: 80 GSDDATCRLFDIRADQELAMY--SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
D +FD R + S + + + S + AG D + +VW K
Sbjct: 411 SGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPDDDYVAAGSADGSVHVWSLSK 470
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
IL + + C + G +A+ + ++ W
Sbjct: 471 GNIVSILKEQTSPILCCSWSGIGKPLASADKNGYVCTW 508
Score = 120 (47.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 45/181 (24%), Positives = 79/181 (43%)
Query: 3 DHLDKSALLGSPA--ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG 60
DH +S + + A H G S+ + T +G D + K+WD G+ ++ G
Sbjct: 206 DHFVESTIPSTCANRIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYG 265
Query: 61 HESDI--NAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRS 117
+I AVT AT S++ ++D+ + + + H + +C + FS S
Sbjct: 266 SLGNILDMAVTHDNKSVIAATSSNNLF--VWDVSSGRVRHTLTGHTDKVCAVDVSKFS-S 322
Query: 118 GRLLLAGYDDFNCNVWDSMK--TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
++ A YD +WD K + + N + CL + DG+ V +G D LR+W
Sbjct: 323 RHVVSAAYDR-TIKLWDLHKGYCTNTVLFTSNCNAI-CLSI--DGLTVFSGHMDGNLRLW 378
Query: 176 N 176
+
Sbjct: 379 D 379
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 182 (69.1 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 45/160 (28%), Positives = 80/160 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WA 76
GH+G VM L D S + D + +WD G + GH S +N+ G
Sbjct: 134 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 193
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
TGSDD T +L+DIR ++ A+ + N + +V F+ + +++G D + VWD
Sbjct: 194 VCTGSDDGTVKLWDIR--KKAAVQTFQNTY-QVLAVTFNDTSDQIISGGIDNDIKVWDLR 250
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + + GH + V+ L ++ +G + + + D+ +RIW+
Sbjct: 251 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWD 290
Score = 139 (54.0 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 50/170 (29%), Positives = 77/170 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFV-SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GHT V S A V +G+ D + KLWDIR + QTF + + AVTF
Sbjct: 176 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQ 234
Query: 77 FATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD- 134
+G D +++D+R ++ M H + +T ++ S G LL+ D +WD
Sbjct: 235 IISGGIDNDIKVWDLRQNKLTYTMRGHAD---SVTGLSLSSEGSYLLSNAMDNTVRIWDV 291
Query: 135 ---SMKTERAGILAG--HD---NRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ K I G H+ N + C + DG +A GS D F+ +W+
Sbjct: 292 RPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSKIAGGSADRFVYVWD 340
Score = 118 (46.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 40/166 (24%), Positives = 70/166 (42%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ--TFPGHESDINAVTFFPNG 74
SGH G+V P T S D LW++ G C T GH + + + +G
Sbjct: 90 SGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTDG 148
Query: 75 WAFATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNV 132
+ S D T ++D + + + H + + S +R G +L+ G DD +
Sbjct: 149 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFV---NSCYPARRGPQLVCTGSDDGTVKL 205
Query: 133 WDSMKTERAGILAGHDNRVSCLGVTEDGMA--VATGSWDSFLRIWN 176
WD K +A + N L VT + + + +G D+ +++W+
Sbjct: 206 WDIRK--KAAVQT-FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 248
Score = 111 (44.1 bits), Expect = 0.00022, P = 0.00022
Identities = 36/160 (22%), Positives = 66/160 (41%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
+T V++++ +SG D K+WD+R T GH + ++ G
Sbjct: 219 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 278
Query: 79 TGSDDATCRLFDIR--ADQE--LAMYSHD--NIICGITSVAFSRSGRLLLAGYDDFNCNV 132
+ + D T R++D+R A +E + ++ + N + ++S G + G D V
Sbjct: 279 SNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYV 338
Query: 133 WDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL 172
WD+ L GH V+ L + + + S D L
Sbjct: 339 WDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDKRL 378
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 184 (69.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 45/157 (28%), Positives = 69/157 (43%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
HT V +PD R VS + D + K+WD C F N V F PNG A
Sbjct: 143 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIA 202
Query: 79 TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT 138
+ D R++DIR ++ L Y + CG+ ++F SG L+ D + D ++
Sbjct: 203 SAGSDHAVRIWDIRMNRLLQHYQVHS--CGVNCLSFHPSGNSLVTASSDGTVKILDLVEG 260
Query: 139 ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L GH V + ++DG +G D+ + +W
Sbjct: 261 RLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVW 297
Score = 161 (61.7 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 39/160 (24%), Positives = 71/160 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + S +P+ + + + D LW ++ + + GH+ + ++ F P G
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLL 75
Query: 78 ATGSDDATCRLFDI-RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+ S D T RL+ + R + +H + SV FS G+ L+ +D + VW
Sbjct: 76 ASASRDKTVRLWVLDRKGKSSEFKAHT---APVRSVDFSADGQFLVTASEDKSIKVWSMY 132
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L H + V C + DG + + S D ++IW+
Sbjct: 133 RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Score = 147 (56.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 37/161 (22%), Positives = 74/161 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDI-RDGSCKQTFPGHESDINAVTFFPNGWA 76
GH V SL +P S + D + +LW + R G + F H + + +V F +G
Sbjct: 58 GHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSE-FKAHTAPVRSVDFSADGQF 116
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
T S+D + +++ + + L ++Y H + + FS GRL+++ +D +WD+
Sbjct: 117 LVTASEDKSIKVWSMYRQRFLYSLYRHTH---WVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + + + + +G +A+ D +RIW+
Sbjct: 174 TSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWD 214
Score = 131 (51.2 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 31/117 (26%), Positives = 54/117 (46%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
S G + +P+ S D + ++WDIR Q + H +N ++F P+G +
Sbjct: 183 SDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNS 242
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
T S D T ++ D+ + L +Y+ + +V+FS+ G L +G D VW
Sbjct: 243 LVTASSDGTVKILDL-VEGRL-IYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVW 297
Score = 126 (49.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 38/157 (24%), Positives = 68/157 (43%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
HT V S+ + D + V+ + D S K+W + + H + F P+G
Sbjct: 101 HTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160
Query: 79 TGSDDATCRLFDIRADQELAMYSHDNIICGITS-VAFSRSGRLLLAGYDDFNCNVWDSMK 137
+ S+D T +++D + Q + +S D++ G + V FS +G + + D +WD
Sbjct: 161 SCSEDKTIKIWDTTSKQCVNNFS-DSV--GFANFVDFSPNGTCIASAGSDHAVRIWDIRM 217
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 174
H V+CL G ++ T S D ++I
Sbjct: 218 NRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKI 254
Score = 121 (47.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 32/127 (25%), Positives = 56/127 (44%)
Query: 51 DGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY-SHDNIICGI 109
D ++ F GH++ I + F PN AT S D L+ ++ Y H +++
Sbjct: 7 DPILERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVV--- 63
Query: 110 TSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWD 169
TS+ FS G LL + D +W + ++ H V + + DG + T S D
Sbjct: 64 TSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASED 123
Query: 170 SFLRIWN 176
+++W+
Sbjct: 124 KSIKVWS 130
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 181 (68.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 44/160 (27%), Positives = 80/160 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WA 76
GH+G VM L D S + D + +WD G + GH S +N+ G
Sbjct: 107 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 166
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
TGSDD T +L+DIR ++ A+ + N + +V F+ + +++G D + VWD
Sbjct: 167 VCTGSDDGTVKLWDIR--KKAAIQTFQNTY-QVLAVTFNDTSDQIISGGIDNDIKVWDLR 223
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + + GH + V+ L ++ +G + + + D+ +R+W+
Sbjct: 224 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 263
Score = 141 (54.7 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 51/170 (30%), Positives = 77/170 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFV-SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GHT V S A V +G+ D + KLWDIR + QTF + + AVTF
Sbjct: 149 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQ 207
Query: 77 FATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD- 134
+G D +++D+R ++ M H + +T ++ S G LL+ D VWD
Sbjct: 208 IISGGIDNDIKVWDLRQNKLTYTMRGHAD---SVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Query: 135 ---SMKTERAGILAG--HD---NRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ K I G H+ N + C + DG +A GS D F+ +W+
Sbjct: 265 RPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSKIAAGSADRFVYVWD 313
Score = 127 (49.8 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 33/120 (27%), Positives = 52/120 (43%)
Query: 60 GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE--LAMYSHDNIICGITSVAFSRS 117
GHE ++ F PNG A+ D L+++ D + + H + + ++
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG---AVMELHYNTD 120
Query: 118 GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRV-SCLGVTEDGMAVATGSWDSFLRIWN 176
G +L + D VWDS ER L GH + V SC V TGS D +++W+
Sbjct: 121 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 180
Score = 114 (45.2 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 36/160 (22%), Positives = 67/160 (41%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
+T V++++ +SG D K+WD+R T GH + ++ G
Sbjct: 192 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 251
Query: 79 TGSDDATCRLFDIR--ADQE--LAMYSHD--NIICGITSVAFSRSGRLLLAGYDDFNCNV 132
+ + D T R++D+R A +E + ++ + N + ++S G + AG D V
Sbjct: 252 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 311
Query: 133 WDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL 172
WD+ L GH ++ + D + + S D L
Sbjct: 312 WDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRL 351
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 181 (68.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 44/160 (27%), Positives = 80/160 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WA 76
GH+G VM L D S + D + +WD G + GH S +N+ G
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 167
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
TGSDD T +L+DIR ++ A+ + N + +V F+ + +++G D + VWD
Sbjct: 168 VCTGSDDGTVKLWDIR--KKAAVQTFQNTY-QVLAVTFNDTSDQIISGGIDNDIKVWDLR 224
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + + GH + V+ L ++ +G + + + D+ +R+W+
Sbjct: 225 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 264
Score = 142 (55.0 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 51/170 (30%), Positives = 77/170 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFV-SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GHT V S A V +G+ D + KLWDIR + QTF + + AVTF
Sbjct: 150 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQ 208
Query: 77 FATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD- 134
+G D +++D+R ++ M H + +T ++ S G LL+ D VWD
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHAD---SVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Query: 135 ---SMKTERAGILAG--HD---NRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ K I G H+ N + C + DG +A GS D F+ +W+
Sbjct: 266 RPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSKIAAGSADRFVYVWD 314
Score = 127 (49.8 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 33/120 (27%), Positives = 52/120 (43%)
Query: 60 GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE--LAMYSHDNIICGITSVAFSRS 117
GHE ++ F PNG A+ D L+++ D + + H + + ++
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG---AVMELHYNTD 121
Query: 118 GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRV-SCLGVTEDGMAVATGSWDSFLRIWN 176
G +L + D VWDS ER L GH + V SC V TGS D +++W+
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Score = 114 (45.2 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 36/160 (22%), Positives = 67/160 (41%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
+T V++++ +SG D K+WD+R T GH + ++ G
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 252
Query: 79 TGSDDATCRLFDIR--ADQE--LAMYSHD--NIICGITSVAFSRSGRLLLAGYDDFNCNV 132
+ + D T R++D+R A +E + ++ + N + ++S G + AG D V
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 312
Query: 133 WDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL 172
WD+ L GH ++ + D + + S D L
Sbjct: 313 WDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 181 (68.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 44/160 (27%), Positives = 80/160 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WA 76
GH+G VM L D S + D + +WD G + GH S +N+ G
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 167
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
TGSDD T +L+DIR ++ A+ + N + +V F+ + +++G D + VWD
Sbjct: 168 VCTGSDDGTVKLWDIR--KKAAIQTFQNTY-QVLAVTFNDTSDQIISGGIDNDIKVWDLR 224
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + + GH + V+ L ++ +G + + + D+ +R+W+
Sbjct: 225 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 264
Score = 141 (54.7 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 51/170 (30%), Positives = 77/170 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFV-SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GHT V S A V +G+ D + KLWDIR + QTF + + AVTF
Sbjct: 150 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQ 208
Query: 77 FATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD- 134
+G D +++D+R ++ M H + +T ++ S G LL+ D VWD
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHAD---SVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Query: 135 ---SMKTERAGILAG--HD---NRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ K I G H+ N + C + DG +A GS D F+ +W+
Sbjct: 266 RPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSKIAAGSADRFVYVWD 314
Score = 127 (49.8 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 33/120 (27%), Positives = 52/120 (43%)
Query: 60 GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE--LAMYSHDNIICGITSVAFSRS 117
GHE ++ F PNG A+ D L+++ D + + H + + ++
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG---AVMELHYNTD 121
Query: 118 GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRV-SCLGVTEDGMAVATGSWDSFLRIWN 176
G +L + D VWDS ER L GH + V SC V TGS D +++W+
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Score = 114 (45.2 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 36/160 (22%), Positives = 67/160 (41%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
+T V++++ +SG D K+WD+R T GH + ++ G
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 252
Query: 79 TGSDDATCRLFDIR--ADQE--LAMYSHD--NIICGITSVAFSRSGRLLLAGYDDFNCNV 132
+ + D T R++D+R A +E + ++ + N + ++S G + AG D V
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 312
Query: 133 WDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL 172
WD+ L GH ++ + D + + S D L
Sbjct: 313 WDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 181 (68.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 44/160 (27%), Positives = 80/160 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WA 76
GH+G VM L D S + D + +WD G + GH S +N+ G
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 167
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
TGSDD T +L+DIR ++ A+ + N + +V F+ + +++G D + VWD
Sbjct: 168 VCTGSDDGTVKLWDIR--KKAAIQTFQNTY-QVLAVTFNDTSDQIISGGIDNDIKVWDLR 224
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + + GH + V+ L ++ +G + + + D+ +R+W+
Sbjct: 225 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 264
Score = 141 (54.7 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 51/170 (30%), Positives = 77/170 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFV-SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GHT V S A V +G+ D + KLWDIR + QTF + + AVTF
Sbjct: 150 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQ 208
Query: 77 FATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD- 134
+G D +++D+R ++ M H + +T ++ S G LL+ D VWD
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHAD---SVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Query: 135 ---SMKTERAGILAG--HD---NRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ K I G H+ N + C + DG +A GS D F+ +W+
Sbjct: 266 RPFAPKERCVRIFQGNVHNFEKNLLRC-SWSPDGSKIAAGSADRFVYVWD 314
Score = 127 (49.8 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 33/120 (27%), Positives = 52/120 (43%)
Query: 60 GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE--LAMYSHDNIICGITSVAFSRS 117
GHE ++ F PNG A+ D L+++ D + + H + + ++
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG---AVMELHYNTD 121
Query: 118 GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRV-SCLGVTEDGMAVATGSWDSFLRIWN 176
G +L + D VWDS ER L GH + V SC V TGS D +++W+
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Score = 114 (45.2 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 36/160 (22%), Positives = 67/160 (41%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
+T V++++ +SG D K+WD+R T GH + ++ G
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 252
Query: 79 TGSDDATCRLFDIR--ADQE--LAMYSHD--NIICGITSVAFSRSGRLLLAGYDDFNCNV 132
+ + D T R++D+R A +E + ++ + N + ++S G + AG D V
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 312
Query: 133 WDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL 172
WD+ L GH ++ + D + + S D L
Sbjct: 313 WDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 181 (68.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 44/160 (27%), Positives = 80/160 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WA 76
GH+G VM L D S + D + +WD G + GH S +N+ G
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 167
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
TGSDD T +L+DIR ++ A+ + N + +V F+ + +++G D + VWD
Sbjct: 168 VCTGSDDGTVKLWDIR--KKAAIQTFQNTY-QVLAVTFNDTSDQIISGGIDNDIKVWDLR 224
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + + GH + V+ L ++ +G + + + D+ +R+W+
Sbjct: 225 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 264
Score = 141 (54.7 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 51/170 (30%), Positives = 77/170 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFV-SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GHT V S A V +G+ D + KLWDIR + QTF + + AVTF
Sbjct: 150 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQ 208
Query: 77 FATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD- 134
+G D +++D+R ++ M H + +T ++ S G LL+ D VWD
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHAD---SVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Query: 135 ---SMKTERAGILAG--HD---NRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ K I G H+ N + C + DG +A GS D F+ +W+
Sbjct: 266 RPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSKIAAGSADRFVYVWD 314
Score = 127 (49.8 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 33/120 (27%), Positives = 52/120 (43%)
Query: 60 GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE--LAMYSHDNIICGITSVAFSRS 117
GHE ++ F PNG A+ D L+++ D + + H + + ++
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG---AVMELHYNTD 121
Query: 118 GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRV-SCLGVTEDGMAVATGSWDSFLRIWN 176
G +L + D VWDS ER L GH + V SC V TGS D +++W+
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Score = 114 (45.2 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 36/160 (22%), Positives = 67/160 (41%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
+T V++++ +SG D K+WD+R T GH + ++ G
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 252
Query: 79 TGSDDATCRLFDIR--ADQE--LAMYSHD--NIICGITSVAFSRSGRLLLAGYDDFNCNV 132
+ + D T R++D+R A +E + ++ + N + ++S G + AG D V
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 312
Query: 133 WDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL 172
WD+ L GH ++ + D + + S D L
Sbjct: 313 WDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 181 (68.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 44/160 (27%), Positives = 80/160 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WA 76
GH+G VM L D S + D + +WD G + GH S +N+ G
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 167
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
TGSDD T +L+DIR ++ A+ + N + +V F+ + +++G D + VWD
Sbjct: 168 VCTGSDDGTVKLWDIR--KKAAIQTFQNTY-QVLAVTFNDTSDQIISGGIDNDIKVWDLR 224
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + + GH + V+ L ++ +G + + + D+ +R+W+
Sbjct: 225 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 264
Score = 143 (55.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 53/170 (31%), Positives = 77/170 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFV-SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GHT V S A V +G+ D + KLWDIR + QTF + + AVTF
Sbjct: 150 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQ 208
Query: 77 FATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD- 134
+G D +++D+R ++ M H + +T ++ S G LL+ D VWD
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHAD---SVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Query: 135 ---SMKTERAGILAG--HD---NRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ K I G H+ N + C + DG +A GS DSFL W+
Sbjct: 266 RPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSKIAAGSADSFLYPWH 314
Score = 126 (49.4 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 33/120 (27%), Positives = 51/120 (42%)
Query: 60 GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE--LAMYSHDNIICGITSVAFSRS 117
GHE ++ F PNG A+ D L+ + D + + H + + ++
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSG---AVMELHYNTD 121
Query: 118 GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRV-SCLGVTEDGMAVATGSWDSFLRIWN 176
G +L + D VWDS ER L GH + V SC V TGS D +++W+
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Score = 108 (43.1 bits), Expect = 0.00049, P = 0.00049
Identities = 35/161 (21%), Positives = 68/161 (42%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
+T V++++ +SG D K+WD+R T GH + ++ G
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 252
Query: 79 TGSDDATCRLFDIR--ADQE--LAMYSHD--NIICGITSVAFSRSGRLLLAGYDDFNCNV 132
+ + D T R++D+R A +E + ++ + N + ++S G + AG D
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYP 312
Query: 133 WDSMKTERAGILAGHD-NRVSCLGVTEDGMAVATGSWDSFL 172
W S+ G + H +R ++G+ + + S D L
Sbjct: 313 WHSLSVRSLGQIPRHRLSRQEDSVKPQEGIXILSASSDKRL 353
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 184 (69.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 48/146 (32%), Positives = 71/146 (48%)
Query: 32 MRTFVSGACDASAKLWD-IRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFD 90
+ VSG+ D + LW D GH++ IN V F P+ A+ S D + +L+D
Sbjct: 341 LERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWD 400
Query: 91 IRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDN 149
R + LA + H + + +A+S RLL++G D VWD + A L GH +
Sbjct: 401 GRTGKYLASLRGH---VAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHAD 457
Query: 150 RVSCLGVTEDGMAVATGSWDSFLRIW 175
V + + DG VA+G D LRIW
Sbjct: 458 EVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 152 (58.6 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 39/162 (24%), Positives = 78/162 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V+S++ +P + SG+ D + + WD+ + T GH + ++++ P+G
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKL 171
Query: 78 ATGSDDATCRLFDIRADQEL--AMYSHDNIICGIT--SVAFSRSGRLLLAGYDDFNCNVW 133
A+G + L+D +++ A+ H I ++ + + R + + D + VW
Sbjct: 172 ASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVW 231
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
D+ IL GH V+CL DG+ + + S D +++W
Sbjct: 232 DTTAGRCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 272
Score = 127 (49.8 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 32/119 (26%), Positives = 60/119 (50%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH + + +PD R S + D S KLWD R G + GH + + + + +
Sbjct: 369 TGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRL 428
Query: 77 FATGSDDATCRLFDIRADQELA--MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
+GS D+T +++D++A Q+LA + H + + +V +S G+ + +G D +W
Sbjct: 429 LVSGSSDSTLKVWDVKA-QKLAADLPGHAD---EVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 127 (49.8 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 34/130 (26%), Positives = 59/130 (45%)
Query: 54 CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSV 112
C + GH + +V F P G A+GS D T R +D+ + H + + S+
Sbjct: 106 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRH---WVLSI 162
Query: 113 AFSRSGRLLLAGYDDFNCNVWDSMKTERAG-ILAGHDNRVSCLG-----VTEDGMAVATG 166
++S G+ L +G + +WD ++ G LAGH ++ L + VA+
Sbjct: 163 SWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASS 222
Query: 167 SWDSFLRIWN 176
S D +R+W+
Sbjct: 223 SKDGSVRVWD 232
Score = 124 (48.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 42/167 (25%), Positives = 76/167 (45%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT V L D + S + D + K+W DG +T GH +N + + +A
Sbjct: 243 TGHTQSVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD-YA 300
Query: 77 FATGS---DDATCRLFDIRAD-QELA--MYSHDNIICGITSVAFSRSGRLLLAGYDDFNC 130
TG+ +A+ D+R QEL S N++ G R L++G DDF
Sbjct: 301 LRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRG-------RGLERLVSGSDDFTL 353
Query: 131 NVWDSMKTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+W + ++ + GH ++ + + D +A+ S+D +++W+
Sbjct: 354 FLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWD 400
Score = 122 (48.0 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 47/162 (29%), Positives = 72/162 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA- 76
GH + M+LS +RT +AS D+R GS ++ S N V G
Sbjct: 287 GHWVNTMALSTDYALRTGAFEPAEASVNAQDLR-GSLQELKERALSRYNLVR--GRGLER 343
Query: 77 FATGSDDATCRLFDIRADQE-LA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+GSDD T L+ D++ LA M H +I V FS R++ + D + +WD
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALI---NQVLFSPDSRIIASASFDKSIKLWD 400
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L GH V + + D + +GS DS L++W+
Sbjct: 401 GRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWD 442
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 184 (69.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 48/160 (30%), Positives = 75/160 (46%)
Query: 18 GHTGDVMSLS-LAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GH DV+S + P+ + +G+CD S +W++ + F GH I V F P+G
Sbjct: 16 GHK-DVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSL 74
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+ S D T RL+ E ++ + SV FSR G+ L+ DD + VW
Sbjct: 75 VASSSRDQTVRLWTPSIKGESTVFKAHT--ASVRSVHFSRDGQRLVTASDDKSVKVWGVE 132
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + L H N V C + DG +A+ D +R+W+
Sbjct: 133 RKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWD 172
Score = 169 (64.5 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 43/157 (27%), Positives = 67/157 (42%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
HT V +PD R S D + +LWD C F + V F +G A
Sbjct: 143 HTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIA 202
Query: 79 TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT 138
+ D T +++DIR ++ + Y N G+ +F SG L++G D + D ++
Sbjct: 203 SSGADNTIKIWDIRTNKLIQHYKVHN--AGVNCFSFHPSGNYLISGSSDSTIKILDLLEG 260
Query: 139 ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L GH V + + DG A+G DS + +W
Sbjct: 261 RLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMW 297
Score = 153 (58.9 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 35/159 (22%), Positives = 70/159 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT + ++ AP S + D + +LW F H + + +V F +G
Sbjct: 58 GHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRL 117
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
T SDD + +++ + +++ +YS + + FS GRL+ + DD +WD+
Sbjct: 118 VTASDDKSVKVWGV--ERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSS 175
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ I + + + G +A+ D+ ++IW+
Sbjct: 176 HQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWD 214
Score = 143 (55.4 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 40/162 (24%), Positives = 69/162 (42%)
Query: 13 SPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP 72
S HT V S+ + D + V+ + D S K+W + + H + + F P
Sbjct: 95 STVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSP 154
Query: 73 NGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNV 132
+G A+ DD T RL+D + Q + +++ T V F+ SG + + D +
Sbjct: 155 DGRLIASCGDDRTVRLWDTSSHQCINIFTDYG--GSATFVDFNSSGTCIASSGADNTIKI 212
Query: 133 WDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 174
WD + H+ V+C G + +GS DS ++I
Sbjct: 213 WDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKI 254
Score = 135 (52.6 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 36/121 (29%), Positives = 60/121 (49%)
Query: 37 SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE 96
SGA D + K+WDIR Q + H + +N +F P+G +GS D+T ++ D+ +
Sbjct: 204 SGA-DNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRL 262
Query: 97 L-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW----DSMKTERAGILAGHDNRV 151
+ ++ H + +T FSR G L +G D +W DS+ +L+ H RV
Sbjct: 263 IYTLHGHKGPVLTVT---FSRDGDLFASGGADSQVLMWKTNFDSLNYRE--LLSKHSKRV 317
Query: 152 S 152
+
Sbjct: 318 T 318
Score = 127 (49.8 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 33/129 (25%), Positives = 60/129 (46%)
Query: 49 IRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY-SHDNIIC 107
+ D + ++ F GH+ I+ F PN ATGS D + ++++ + H ++I
Sbjct: 5 MEDPTLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVIT 64
Query: 108 GITSVAFSRSGRLLLAGYDDFNCNVWD-SMKTERAGILAGHDNRVSCLGVTEDGMAVATG 166
G+ F+ SG L+ + D +W S+K E + H V + + DG + T
Sbjct: 65 GVN---FAPSGSLVASSSRDQTVRLWTPSIKGEST-VFKAHTASVRSVHFSRDGQRLVTA 120
Query: 167 SWDSFLRIW 175
S D +++W
Sbjct: 121 SDDKSVKVW 129
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 185 (70.2 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 45/161 (27%), Positives = 75/161 (46%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT V S+ L V+G+ S ++WD+ +T GH+++I ++ F P G
Sbjct: 60 TGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF 119
Query: 77 FATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
A+GS D +L+DIR + Y H + + FS G+ L + DD +WD
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQ---AVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ GH V+ + + +A+GS D +R W+
Sbjct: 177 TAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 163 (62.4 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 43/160 (26%), Positives = 68/160 (42%)
Query: 19 HTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
H +V SL L R +G D LW I +C + GH S + +V
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
GS + R++D+ A + L + H IC S+ F G + +G D N +WD
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANIC---SLDFHPYGEFVASGSQDTNIKLWDIR 135
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ GH V CL + DG +A+ + D +++W+
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD 175
Score = 160 (61.4 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 40/139 (28%), Positives = 62/139 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH ++ SL P SG+ D + KLWDIR C + GH + + F P+G
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWL 162
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+ +DD T +L+D+ A + ++ + H + V F + LL +G D WD
Sbjct: 163 ASAADDHTVKLWDLTAGKMMSEFPGHTG---PVNVVEFHPNEYLLASGSSDRTIRFWDLE 219
Query: 137 KTERAGILAGHDNRVSCLG 155
K + + G V G
Sbjct: 220 KFQVVSCIEGEPGPVRYAG 238
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 180 (68.4 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 44/162 (27%), Positives = 76/162 (46%)
Query: 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
A SGH V + P VS + DA+ K+WD G ++T GH + ++F +G
Sbjct: 38 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 97
Query: 75 WAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A+ S D T +L+D + + + M+ HD+ ++SVA +G +++ D +W
Sbjct: 98 KLLASCSADMTIKLWDFQGFECIRTMHGHDH---NVSSVAIMPNGDHIVSASRDKTIKMW 154
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ GH V + +DG +A+ S D +R+W
Sbjct: 155 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 196
Score = 147 (56.8 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA-DQELAMYSHDNIICGITSVA 113
K GH S + V F P + S+DAT +++D D E + H + + ++
Sbjct: 36 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD---SVQDIS 92
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
F SG+LL + D +WD E + GHD+ VS + + +G + + S D ++
Sbjct: 93 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 152
Query: 174 IW 175
+W
Sbjct: 153 MW 154
Score = 144 (55.7 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V +S + S + D + KLWD + C +T GH+ ++++V PNG
Sbjct: 83 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 142
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ S D T ++++++ + ++ H + V ++ G L+ + +D VW
Sbjct: 143 VSASRDKTIKMWEVQTGYCVKTFTGHRE---WVRMVRPNQDGTLIASCSNDQTVRVWVVA 199
Query: 137 KTERAGILAGHDNRVSCLGVTEDG----MAVATGS 167
E L H++ V C+ + ++ ATGS
Sbjct: 200 TKECKAELREHEHVVECISWAPESSYSSISEATGS 234
Score = 129 (50.5 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 27/100 (27%), Positives = 53/100 (53%)
Query: 36 VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95
+SG+ D + K+WD+ G C T GH++ + V F G + +DD T R++D + +
Sbjct: 247 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 306
Query: 96 EL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+ + +H++ + TS+ F ++ ++ G D VW+
Sbjct: 307 CMKTLNAHEHFV---TSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 114 (45.2 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+GS D T +++D+ L + HDN + G V F G+ +L+ DD VWD
Sbjct: 248 SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG---VLFHSGGKFILSCADDKTLRVWDYKN 304
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L H++ V+ L + V TGS D +++W
Sbjct: 305 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 342
Score = 52 (23.4 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP---- 72
+GH V + D S + D + ++W + CK HE + +++ P
Sbjct: 166 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 225
Query: 73 NGWAFATGSD 82
+ + ATGS+
Sbjct: 226 SSISEATGSE 235
>ASPGD|ASPL0000015866 [details] [associations]
symbol:AN8183 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0030529 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
ProteinModelPortal:C8V743 EnsemblFungi:CADANIAT00004225
Uniprot:C8V743
Length = 851
Score = 187 (70.9 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 44/149 (29%), Positives = 72/149 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + +L+ +PD + V+ A D K+WD++ G C TF H S + A F G
Sbjct: 336 GHLDSMNALAYSPDGQRIVTAADDGKIKVWDVKSGFCLVTFTEHTSGVTACQFSKKGNVL 395
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSM 136
T S D + R +D+ + ++ + + +S+A SG ++ AG D F+ +VW
Sbjct: 396 FTSSLDGSVRAWDLIRYRNFRTFTAPSRL-SFSSLAVDPSGEVICAGSPDSFDIHVWSVQ 454
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVAT 165
+ L+GH+ VS L DG + T
Sbjct: 455 TGQLLDQLSGHEGPVSALAFAADGNHLLT 483
Score = 137 (53.3 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 37/157 (23%), Positives = 68/157 (43%)
Query: 22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS 81
DV+S++ + F S +W+ + S GH +NA+ + P+G T +
Sbjct: 299 DVVSINKTGEWLAFGSSKF-GQLLVWEWQSESYILKQQGHLDSMNALAYSPDGQRIVTAA 357
Query: 82 DDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERA 141
DD +++D+++ L ++ G+T+ FS+ G +L D + WD ++
Sbjct: 358 DDGKIKVWDVKSGFCLVTFTEHT--SGVTACQFSKKGNVLFTSSLDGSVRAWDLIRYRNF 415
Query: 142 GILAGHDN-RVSCLGVTEDGMAVATGSWDSF-LRIWN 176
S L V G + GS DSF + +W+
Sbjct: 416 RTFTAPSRLSFSSLAVDPSGEVICAGSPDSFDIHVWS 452
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 188 (71.2 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 50/166 (30%), Positives = 78/166 (46%)
Query: 13 SPAA-SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFF 71
SP + GHT V S++ + ++GA KLWD+ + + F GH S+ +AV F
Sbjct: 50 SPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFH 109
Query: 72 PNGWAFATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNC 130
P G A+GS D R++D R + Y H GI+++ FS GR +++G D
Sbjct: 110 PFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTR---GISTIEFSPDGRWVVSGGLDNVV 166
Query: 131 NVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
VWD + H+ + L +ATGS D ++ W+
Sbjct: 167 KVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWD 212
Score = 170 (64.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 40/159 (25%), Positives = 71/159 (44%)
Query: 19 HTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
H+G+V LS+ R ++G D LW I + + GH S +++V F
Sbjct: 14 HSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLV 73
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
G+ +L+D+ + + ++ C ++V F G L +G D N VWD+ K
Sbjct: 74 LAGASSGVIKLWDLEESKMVRAFTGHRSNC--SAVEFHPFGEFLASGSSDTNLRVWDTRK 131
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
GH +S + + DG V +G D+ +++W+
Sbjct: 132 KGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWD 170
Score = 163 (62.4 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 35/110 (31%), Positives = 54/110 (49%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT + ++ +PD R VSG D K+WD+ G F HE I ++ F P +
Sbjct: 140 GHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLL 199
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD 127
ATGS D T + +D+ + + + G+ ++AF G+ L G DD
Sbjct: 200 ATGSADRTVKFWDLETFELIGTTRPE--ATGVRAIAFHPDGQTLFCGLDD 247
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 179 (68.1 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 39/156 (25%), Positives = 79/156 (50%)
Query: 22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDIN-AVTFFPNGWAFATG 80
D+ ++ +P + +SG D ++ + G +QT ++ + P+G A+G
Sbjct: 129 DLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASG 188
Query: 81 SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER 140
+ D +FD+ A + + + + + S+ FS + +LLL DD + ++D ++
Sbjct: 189 AIDGIITIFDVAAGK--VVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDV 246
Query: 141 AGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
G L+GH + V C+ +EDG A+ S D+ ++IW+
Sbjct: 247 VGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWD 282
Score = 170 (64.9 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 42/154 (27%), Positives = 74/154 (48%)
Query: 24 MSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDD 83
+S++ +PD + SGA D ++D+ G QT GH + ++ F PN T SDD
Sbjct: 174 LSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDD 233
Query: 84 ATCRLFDI-RADQELAMYSHDN-IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERA 141
+L+D+ +D + H + ++C VAFS G+ + D + +WD+ + +
Sbjct: 234 GHMKLYDVTHSDVVGTLSGHASWVLC----VAFSEDGKHFASSSSDNSVKIWDTSERKCL 289
Query: 142 GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
A H ++V + + VA+ S D L I+
Sbjct: 290 HTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
Score = 123 (48.4 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 38/162 (23%), Positives = 73/162 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V+S++++ D +T S + D++ LWD R G K D+ V F P
Sbjct: 83 GHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLWTVQFSPCNKYV 142
Query: 78 ATGSDDATCRLFDI---RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+G +D ++ + +A+Q L + + S+A+S G+ + +G D ++D
Sbjct: 143 ISGLNDGKISMYSVETGKAEQTLDAQNGKYTL----SIAYSPDGKYIASGAIDGIITIFD 198
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L GH V L + + + T S D +++++
Sbjct: 199 VAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYD 240
Score = 113 (44.8 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 36/146 (24%), Positives = 72/146 (49%)
Query: 36 VSGACDASAKLWDIR-DGSCK--QTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR 92
V+G D K+WD++ D + K GH + +V +G A+ S D+T L+D R
Sbjct: 56 VTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDAR 115
Query: 93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVS 152
+ + + S + + +V FS + +++G +D +++ S++T +A N
Sbjct: 116 SGDKKHLLSFGPV--DLWTVQFSPCNKYVISGLNDGKISMY-SVETGKAEQTLDAQNGKY 172
Query: 153 CLGV--TEDGMAVATGSWDSFLRIWN 176
L + + DG +A+G+ D + I++
Sbjct: 173 TLSIAYSPDGKYIASGAIDGIITIFD 198
Score = 111 (44.1 bits), Expect = 0.00017, P = 0.00017
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
SGH V+ ++ + D + F S + D S K+WD + C TF H + V + P
Sbjct: 251 SGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDK 310
Query: 77 FATGSDDATCRLF 89
A+ S+D + ++
Sbjct: 311 VASASEDKSLNIY 323
Score = 107 (42.7 bits), Expect = 0.00056, P = 0.00056
Identities = 29/117 (24%), Positives = 56/117 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V SL +P+ + ++ + D KL+D+ T GH S + V F +G F
Sbjct: 210 GHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHF 269
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A+ S D + +++D + L ++ H + + G V +S + + +D + N++
Sbjct: 270 ASSSSDNSVKIWDTSERKCLHTFAEHTDQVWG---VRYSPGNDKVASASEDKSLNIY 323
>UNIPROTKB|Q5ZMV7 [details] [associations]
symbol:WDR82 "WD repeat-containing protein 82" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 KO:K14962
HOGENOM:HOG000176477 GeneTree:ENSGT00530000063965 EMBL:AJ719277
IPI:IPI00598962 RefSeq:NP_001006135.1 UniGene:Gga.17656
ProteinModelPortal:Q5ZMV7 STRING:Q5ZMV7 PRIDE:Q5ZMV7
Ensembl:ENSGALT00000036280 GeneID:415942 KEGG:gga:415942 CTD:80335
HOVERGEN:HBG089149 NextBio:20819468 ArrayExpress:Q5ZMV7
Uniprot:Q5ZMV7
Length = 313
Score = 178 (67.7 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 48/166 (28%), Positives = 80/166 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V++LS++P TF+SG+ D + +LWD+R +C+ H +F P G F
Sbjct: 105 GHTKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLM--HLQGKPVCSFDPEGLIF 162
Query: 78 ATGSDDATCRLFDIRA-DQ-ELAMYS--HDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A G + +L+D+R+ D+ A + +D C T + FS G+L+L + +
Sbjct: 163 AAGVNSEMVKLYDLRSFDKGPFATFKMQYDRT-CEWTGLKFSNDGKLILISTNGGFIRLI 221
Query: 134 DSMKTERAGILAGHDNRVSCL---GVTEDGMAVATGSWDSFLRIWN 176
D+ K G++N + T D + GS D + +WN
Sbjct: 222 DAFKGAVLHTFGGYNNSKAVTLEASFTPDSQFIMIGSEDGKIHVWN 267
>WB|WBGene00018891 [details] [associations]
symbol:F55F8.3 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0040007 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:FO081477 PIR:T29585
RefSeq:NP_491653.2 ProteinModelPortal:P91341 SMR:P91341
STRING:P91341 PaxDb:P91341 EnsemblMetazoa:F55F8.3 GeneID:172224
KEGG:cel:CELE_F55F8.3 UCSC:F55F8.3 CTD:172224 WormBase:F55F8.3
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 InParanoid:P91341
KO:K14558 OMA:VWQCDTP NextBio:874579 InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003 Uniprot:P91341
Length = 910
Score = 187 (70.9 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 43/162 (26%), Positives = 79/162 (48%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
H+ + + +PD +GA D K+W+ R C TF H S + AV + +G A
Sbjct: 359 HSLRITTAEYSPDGSLMATGAEDGKVKIWNSRSSFCTVTFDEHTSGVTAVKWTQSGRAIL 418
Query: 79 TGSDDATCRLFDIRADQELAMYSHDNIICG----ITSVAFSRSGRLLLAGYDD-FNCNVW 133
+ S D T R D++ + ++C + ++A ++G L++AG + FN +W
Sbjct: 419 SASLDGTVRAHDLKRYRNFR-----TLVCPEPTQLATLAVDKAGDLVIAGAKEVFNIYIW 473
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
IL+GH++ +S + + G + +GSWD +++W
Sbjct: 474 SFETGHLLDILSGHESAISSIDI--HGNHIVSGSWDRTIKMW 513
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 185 (70.2 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 45/161 (27%), Positives = 75/161 (46%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT V S+ L V+G+ S ++WD+ +T GH+++I ++ F P G
Sbjct: 60 TGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF 119
Query: 77 FATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
A+GS D +L+DIR + Y H + + FS G+ L + DD +WD
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQ---AVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ GH V+ + + +A+GS D +R W+
Sbjct: 177 TAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 180 (68.4 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 46/159 (28%), Positives = 73/159 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH ++ SL P SG+ D + KLWDIR C + GH + + F P+G
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWL 162
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+ +DD T +L+D+ A + ++ + H + V F + LL +G D WD
Sbjct: 163 ASAADDHTVKLWDLTAGKMMSEFPGHTG---PVNVVEFHPNEYLLASGSSDRTIRFWDLE 219
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
K + + G V + DG + +G DS LR++
Sbjct: 220 KFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDS-LRVY 257
Score = 171 (65.3 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 47/159 (29%), Positives = 77/159 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V L +PD + S A D + KLWD+ G FPGH +N V F PN +
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
A+GS D T R +D+ Q ++ + + SV F+ G L +G D + V+ +
Sbjct: 205 ASGSSDRTIRFWDLEKFQVVSCIEGEP--GPVRSVLFNPDGCCLYSGCQD-SLRVY-GWE 260
Query: 138 TERA-GILAGHDNRVSCLGVTED---GMAVATGSWDSFL 172
ER ++ + +V+ L + D G+A + + S++
Sbjct: 261 PERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYV 299
Score = 163 (62.4 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 43/160 (26%), Positives = 68/160 (42%)
Query: 19 HTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
H +V SL L R +G D LW I +C + GH S + +V
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
GS + R++D+ A + L + H IC S+ F G + +G D N +WD
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANIC---SLDFHPYGEFVASGSQDTNIKLWDIR 135
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ GH V CL + DG +A+ + D +++W+
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD 175
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 185 (70.2 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 45/161 (27%), Positives = 75/161 (46%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT V S+ L V+G+ S ++WD+ +T GH+++I ++ F P G
Sbjct: 60 TGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF 119
Query: 77 FATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
A+GS D +L+DIR + Y H + + FS G+ L + DD +WD
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQ---AVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ GH V+ + + +A+GS D +R W+
Sbjct: 177 TAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 180 (68.4 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 46/159 (28%), Positives = 73/159 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH ++ SL P SG+ D + KLWDIR C + GH + + F P+G
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWL 162
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+ +DD T +L+D+ A + ++ + H + V F + LL +G D WD
Sbjct: 163 ASAADDHTVKLWDLTAGKMMSEFPGHTG---PVNVVEFHPNEYLLASGSSDRTIRFWDLE 219
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
K + + G V + DG + +G DS LR++
Sbjct: 220 KFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDS-LRVY 257
Score = 171 (65.3 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 47/159 (29%), Positives = 77/159 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V L +PD + S A D + KLWD+ G FPGH +N V F PN +
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
A+GS D T R +D+ Q ++ + + SV F+ G L +G D + V+ +
Sbjct: 205 ASGSSDRTIRFWDLEKFQVVSCIEGEP--GPVRSVLFNPDGCCLYSGCQD-SLRVY-GWE 260
Query: 138 TERA-GILAGHDNRVSCLGVTED---GMAVATGSWDSFL 172
ER ++ + +V+ L + D G+A + + S++
Sbjct: 261 PERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYV 299
Score = 163 (62.4 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 43/160 (26%), Positives = 68/160 (42%)
Query: 19 HTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
H +V SL L R +G D LW I +C + GH S + +V
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
GS + R++D+ A + L + H IC S+ F G + +G D N +WD
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANIC---SLDFHPYGEFVASGSQDTNIKLWDIR 135
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ GH V CL + DG +A+ + D +++W+
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD 175
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 185 (70.2 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 45/161 (27%), Positives = 75/161 (46%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT V S+ L V+G+ S ++WD+ +T GH+++I ++ F P G
Sbjct: 60 TGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF 119
Query: 77 FATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
A+GS D +L+DIR + Y H + + FS G+ L + DD +WD
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQ---AVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ GH V+ + + +A+GS D +R W+
Sbjct: 177 TAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 180 (68.4 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 46/159 (28%), Positives = 73/159 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH ++ SL P SG+ D + KLWDIR C + GH + + F P+G
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWL 162
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+ +DD T +L+D+ A + ++ + H + V F + LL +G D WD
Sbjct: 163 ASAADDHTVKLWDLTAGKMMSEFPGHTG---PVNVVEFHPNEYLLASGSSDRTIRFWDLE 219
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
K + + G V + DG + +G DS LR++
Sbjct: 220 KFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDS-LRVY 257
Score = 170 (64.9 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 48/159 (30%), Positives = 76/159 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V L +PD + S A D + KLWD+ G FPGH +N V F PN +
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
A+GS D T R +D+ Q ++ + + SV F+ G L +G D + V+ +
Sbjct: 205 ASGSSDRTIRFWDLEKFQVVSCIEGEP--GPVRSVLFNPDGCCLYSGCQD-SLRVY-GWE 260
Query: 138 TERA-GILAGHDNRVSCLGVTED---GMAVATGSWDSFL 172
ER ++ +V+ L V D G+A + + S++
Sbjct: 261 PERCFDVVLVSWGKVADLAVCNDQLIGVAFSQSNVSSYV 299
Score = 163 (62.4 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 43/160 (26%), Positives = 68/160 (42%)
Query: 19 HTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
H +V SL L R +G D LW I +C + GH S + +V
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
GS + R++D+ A + L + H IC S+ F G + +G D N +WD
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANIC---SLDFHPYGEFVASGSQDTNIKLWDIR 135
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ GH V CL + DG +A+ + D +++W+
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD 175
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 185 (70.2 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 45/161 (27%), Positives = 75/161 (46%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT V S+ L V+G+ S ++WD+ +T GH+++I ++ F P G
Sbjct: 60 TGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF 119
Query: 77 FATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
A+GS D +L+DIR + Y H + + FS G+ L + DD +WD
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQ---AVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ GH V+ + + +A+GS D +R W+
Sbjct: 177 TAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 180 (68.4 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 46/159 (28%), Positives = 73/159 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH ++ SL P SG+ D + KLWDIR C + GH + + F P+G
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWL 162
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+ +DD T +L+D+ A + ++ + H + V F + LL +G D WD
Sbjct: 163 ASAADDHTVKLWDLTAGKMMSEFPGHTG---PVNVVEFHPNEYLLASGSSDRTIRFWDLE 219
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
K + + G V + DG + +G DS LR++
Sbjct: 220 KFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDS-LRVY 257
Score = 171 (65.3 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 47/159 (29%), Positives = 77/159 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V L +PD + S A D + KLWD+ G FPGH +N V F PN +
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
A+GS D T R +D+ Q ++ + + SV F+ G L +G D + V+ +
Sbjct: 205 ASGSSDRTIRFWDLEKFQVVSCIEGEP--GPVRSVLFNPDGCCLYSGCQD-SLRVY-GWE 260
Query: 138 TERA-GILAGHDNRVSCLGVTED---GMAVATGSWDSFL 172
ER ++ + +V+ L + D G+A + + S++
Sbjct: 261 PERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYV 299
Score = 163 (62.4 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 43/160 (26%), Positives = 68/160 (42%)
Query: 19 HTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
H +V SL L R +G D LW I +C + GH S + +V
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
GS + R++D+ A + L + H IC S+ F G + +G D N +WD
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANIC---SLDFHPYGEFVASGSQDTNIKLWDIR 135
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ GH V CL + DG +A+ + D +++W+
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD 175
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 185 (70.2 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 45/161 (27%), Positives = 75/161 (46%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT V S+ L V+G+ S ++WD+ +T GH+++I ++ F P G
Sbjct: 60 TGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF 119
Query: 77 FATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
A+GS D +L+DIR + Y H + + FS G+ L + DD +WD
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQ---AVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ GH V+ + + +A+GS D +R W+
Sbjct: 177 TAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 181 (68.8 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 46/159 (28%), Positives = 73/159 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH ++ SL P SG+ D + KLWDIR C + GH + + F P+G
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWL 162
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+ +DD T +L+D+ A + ++ + H + V F + LL +G D WD
Sbjct: 163 ASAADDHTVKLWDLTAGKMMSEFPGHTG---PVNVVEFHPNEYLLASGSSDRTIRFWDLE 219
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
K + + G V + DG + +G DS LR++
Sbjct: 220 KFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDS-LRVY 257
Score = 172 (65.6 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 46/159 (28%), Positives = 77/159 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V L +PD + S A D + KLWD+ G FPGH +N V F PN +
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
A+GS D T R +D+ Q ++ + + S+ F+ G L +G D + V+ +
Sbjct: 205 ASGSSDRTIRFWDLEKFQVVSCIEGEP--GPVRSILFNPDGCCLYSGCQD-SLRVY-GWE 260
Query: 138 TERA-GILAGHDNRVSCLGVTED---GMAVATGSWDSFL 172
ER ++ H +V+ L + + G+A + + S++
Sbjct: 261 PERCFDVVLVHWGKVADLAICNNQLIGVAFSQSNVSSYV 299
Score = 163 (62.4 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 43/160 (26%), Positives = 68/160 (42%)
Query: 19 HTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
H +V SL L R +G D LW I +C + GH S + +V
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
GS + R++D+ A + L + H IC S+ F G + +G D N +WD
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANIC---SLDFHPYGEFVASGSQDTNIKLWDIR 135
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ GH V CL + DG +A+ + D +++W+
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD 175
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 181 (68.8 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 44/160 (27%), Positives = 80/160 (50%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WA 76
GH+G VM L D S + D + +WD G + GH S +N+ G
Sbjct: 107 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 166
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
TGSDD T +L+DIR ++ A+ + N + +V F+ + +++G D + VWD
Sbjct: 167 VCTGSDDGTVKLWDIR--KKAAIQTFQNTY-QVLAVTFNDTSDQIISGGIDNDIKVWDLR 223
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + + GH + V+ L ++ +G + + + D+ +R+W+
Sbjct: 224 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 263
Score = 141 (54.7 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 51/170 (30%), Positives = 77/170 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFV-SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
GHT V S A V +G+ D + KLWDIR + QTF + + AVTF
Sbjct: 149 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQ 207
Query: 77 FATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD- 134
+G D +++D+R ++ M H + +T ++ S G LL+ D VWD
Sbjct: 208 IISGGIDNDIKVWDLRQNKLTYTMRGHAD---SVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Query: 135 ---SMKTERAGILAG--HD---NRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ K I G H+ N + C + DG +A GS D F+ +W+
Sbjct: 265 RPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSKIAAGSADRFVYVWD 313
Score = 127 (49.8 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 33/120 (27%), Positives = 52/120 (43%)
Query: 60 GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE--LAMYSHDNIICGITSVAFSRS 117
GHE ++ F PNG A+ D L+++ D + + H + + ++
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG---AVMELHYNTD 120
Query: 118 GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRV-SCLGVTEDGMAVATGSWDSFLRIWN 176
G +L + D VWDS ER L GH + V SC V TGS D +++W+
Sbjct: 121 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 180
Score = 116 (45.9 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 35/154 (22%), Positives = 65/154 (42%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
+T V++++ +SG D K+WD+R T GH + ++ G
Sbjct: 192 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 251
Query: 79 TGSDDATCRLFDIR--ADQE--LAMYSHD--NIICGITSVAFSRSGRLLLAGYDDFNCNV 132
+ + D T R++D+R A +E + ++ + N + ++S G + AG D V
Sbjct: 252 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 311
Query: 133 WDSMKTERAGILAGHDNRVSCLGVTEDGMAVATG 166
WD+ L GH ++ + D + TG
Sbjct: 312 WDTTSRRILYKLPGHAGSINEVAFHPDEPIIETG 345
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 181 (68.8 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 47/142 (33%), Positives = 70/142 (49%)
Query: 36 VSGACDASAKLWD-IRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94
VSG+ D + +W D GH++ IN V F P+ A+ S D + +L+D R
Sbjct: 296 VSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTG 355
Query: 95 QELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSC 153
+ LA + H + + +A+S RLL++G D VWD + A L GH + V
Sbjct: 356 KYLASLRGH---VAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYA 412
Query: 154 LGVTEDGMAVATGSWDSFLRIW 175
+ + DG VA+G D LRIW
Sbjct: 413 VDWSPDGQRVASGGKDKCLRIW 434
Score = 156 (60.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 39/162 (24%), Positives = 78/162 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V+S++ +P + SG+ D + + WD+ + T GH + ++++ P+G
Sbjct: 63 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKTL 122
Query: 78 ATGSDDATCRLFDIRADQELA--MYSHDNIICGIT--SVAFSRSGRLLLAGYDDFNCNVW 133
A+G + L+D +++ + H I G++ + + R + + D + VW
Sbjct: 123 ASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVW 182
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
D+ IL GH V+CL DG+ + + S D +++W
Sbjct: 183 DTTAGRCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 223
Score = 127 (49.8 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 32/119 (26%), Positives = 60/119 (50%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH + + +PD R S + D S KLWD R G + GH + + + + +
Sbjct: 320 TGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRL 379
Query: 77 FATGSDDATCRLFDIRADQELA--MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
+GS D+T +++D++A Q+LA + H + + +V +S G+ + +G D +W
Sbjct: 380 LVSGSSDSTLKVWDVKA-QKLAADLPGHAD---EVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 126 (49.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 33/130 (25%), Positives = 60/130 (46%)
Query: 54 CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSV 112
C + GH + +V F P G A+GS D T R +D+ + H + + S+
Sbjct: 57 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRH---WVLSI 113
Query: 113 AFSRSGRLLLAGYDDFNCNVWDSMKTERAG-ILAGHDNRVSCLG-----VTEDGMAVATG 166
++S G+ L +G + +WD ++ G +LAGH ++ L + +A+
Sbjct: 114 SWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASS 173
Query: 167 SWDSFLRIWN 176
S D +R+W+
Sbjct: 174 SKDGSVRVWD 183
Score = 115 (45.5 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 40/165 (24%), Positives = 74/165 (44%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT V L D + S + D + K+W DG +T GH +N + + +A
Sbjct: 194 TGHTQSVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD-YA 251
Query: 77 FATGS---DDATCRLFDIRAD-QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNV 132
TG+ +A+ D++ QEL D + V RL+ +G DDF +
Sbjct: 252 LRTGAFEPAEASINAQDLQGSLQELK----DRALRRYNLVRGQGPERLV-SGSDDFTLFM 306
Query: 133 WDSMKTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
W + ++ + GH ++ + + D +A+ S+D +++W+
Sbjct: 307 WSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWD 351
Score = 110 (43.8 bits), Expect = 0.00036, P = 0.00036
Identities = 43/161 (26%), Positives = 70/161 (43%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + M+LS +RT +AS D++ GS ++ N V
Sbjct: 238 GHWVNTMALSTDYALRTGAFEPAEASINAQDLQ-GSLQELKDRALRRYNLVRG-QGPERL 295
Query: 78 ATGSDDATCRLFDIRADQE-LA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+GSDD T ++ D++ LA M H +I V FS R++ + D + +WD
Sbjct: 296 VSGSDDFTLFMWSPAEDKKPLARMTGHQALI---NQVLFSPDSRIIASASFDKSIKLWDG 352
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L GH V + + D + +GS DS L++W+
Sbjct: 353 RTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWD 393
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 180 (68.4 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 42/160 (26%), Positives = 75/160 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + S+ + + + SG+ D+ +W ++ S F GH+ + V F P+G
Sbjct: 17 GHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+GS D T R++ E ++ +H + SV F G+ L+ DD VW +
Sbjct: 77 ASGSRDKTVRIWIPNVKGESTVFRAHT---ATVRSVHFCSDGQSLVTASDDKTVKVWSTH 133
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + L+ H N V C + DG + + S D +++W+
Sbjct: 134 RQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWD 173
Score = 173 (66.0 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 43/159 (27%), Positives = 68/159 (42%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
S H V +PD R VS + D + KLWD C ++ H + V F P+G
Sbjct: 142 SQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTC 201
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A S D T +++D+R + L Y + + +++F SG LL D + D M
Sbjct: 202 IAAASMDNTVKVWDVRTHRLLQHYQLHS--AAVNALSFHPSGNYLLTASSDSTLKILDLM 259
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ L GH + + + G A+G D + +W
Sbjct: 260 EGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 161 (61.7 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 40/161 (24%), Positives = 73/161 (45%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT-FPGHESDINAVTFFPNGW 75
+GH V ++ +P SG+ D + ++W I + + T F H + + +V F +G
Sbjct: 58 AGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-IPNVKGESTVFRAHTATVRSVHFCSDGQ 116
Query: 76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+ T SDD T +++ + L +S I + FS GRL+++ DD +WD
Sbjct: 117 SLVTASDDKTVKVWSTHRQKFL--FSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDK 174
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
E H V+ + G +A S D+ +++W+
Sbjct: 175 TSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWD 215
Score = 150 (57.9 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 35/118 (29%), Positives = 57/118 (48%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
H G V + P + + D + K+WD+R Q + H + +NA++F P+G
Sbjct: 186 HGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLL 245
Query: 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
T S D+T ++ D+ + L ++ H T+VAFSR+G +G D VW S
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQG---PATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 127 (49.8 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 35/128 (27%), Positives = 60/128 (46%)
Query: 51 DGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS-HDNIICGI 109
D S ++ F GH I +V F N A+GS D+ ++ ++ ++ H + +
Sbjct: 8 DPSLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKD---AV 64
Query: 110 TSVAFSRSGRLLLAGYDDFNCNVW-DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW 168
T V FS SG LL +G D +W ++K E + H V + DG ++ T S
Sbjct: 65 TCVNFSPSGHLLASGSRDKTVRIWIPNVKGEST-VFRAHTATVRSVHFCSDGQSLVTASD 123
Query: 169 DSFLRIWN 176
D +++W+
Sbjct: 124 DKTVKVWS 131
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 180 (68.4 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 44/162 (27%), Positives = 76/162 (46%)
Query: 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
A SGH V + P VS + DA+ K+WD G ++T GH + ++F +G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 75 WAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A+ S D T +L+D + + + M+ HD+ ++SVA +G +++ D +W
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDH---NVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ GH V + +DG +A+ S D +R+W
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 147 (56.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA-DQELAMYSHDNIICGITSVA 113
K GH S + V F P + S+DAT +++D D E + H + + ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD---SVQDIS 157
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
F SG+LL + D +WD E + GHD+ VS + + +G + + S D ++
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 174 IW 175
+W
Sbjct: 218 MW 219
Score = 144 (55.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V +S + S + D + KLWD + C +T GH+ ++++V PNG
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ S D T ++++++ + ++ H + V ++ G L+ + +D VW
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHRE---WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 137 KTERAGILAGHDNRVSCLGVTEDG----MAVATGS 167
E L H++ V C+ + ++ ATGS
Sbjct: 265 TKECKAELREHEHVVECISWAPESSYSSISEATGS 299
Score = 129 (50.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 27/100 (27%), Positives = 53/100 (53%)
Query: 36 VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95
+SG+ D + K+WD+ G C T GH++ + V F G + +DD T R++D + +
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 96 EL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+ + +H++ + TS+ F ++ ++ G D VW+
Sbjct: 372 CMKTLNAHEHFV---TSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 114 (45.2 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+GS D T +++D+ L + HDN + G V F G+ +L+ DD VWD
Sbjct: 313 SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG---VLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L H++ V+ L + V TGS D +++W
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 52 (23.4 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP---- 72
+GH V + D S + D + ++W + CK HE + +++ P
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Query: 73 NGWAFATGSD 82
+ + ATGS+
Sbjct: 291 SSISEATGSE 300
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 180 (68.4 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 44/162 (27%), Positives = 76/162 (46%)
Query: 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
A SGH V + P VS + DA+ K+WD G ++T GH + ++F +G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 75 WAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A+ S D T +L+D + + + M+ HD+ ++SVA +G +++ D +W
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDH---NVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ GH V + +DG +A+ S D +R+W
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 147 (56.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA-DQELAMYSHDNIICGITSVA 113
K GH S + V F P + S+DAT +++D D E + H + + ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD---SVQDIS 157
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
F SG+LL + D +WD E + GHD+ VS + + +G + + S D ++
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 174 IW 175
+W
Sbjct: 218 MW 219
Score = 144 (55.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V +S + S + D + KLWD + C +T GH+ ++++V PNG
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ S D T ++++++ + ++ H + V ++ G L+ + +D VW
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHRE---WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 137 KTERAGILAGHDNRVSCLGVTEDG----MAVATGS 167
E L H++ V C+ + ++ ATGS
Sbjct: 265 TKECKAELREHEHVVECISWAPESSYSSISEATGS 299
Score = 129 (50.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 27/100 (27%), Positives = 53/100 (53%)
Query: 36 VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95
+SG+ D + K+WD+ G C T GH++ + V F G + +DD T R++D + +
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 96 EL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+ + +H++ + TS+ F ++ ++ G D VW+
Sbjct: 372 CMKTLNAHEHFV---TSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 114 (45.2 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+GS D T +++D+ L + HDN + G V F G+ +L+ DD VWD
Sbjct: 313 SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG---VLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L H++ V+ L + V TGS D +++W
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 52 (23.4 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP---- 72
+GH V + D S + D + ++W + CK HE + +++ P
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Query: 73 NGWAFATGSD 82
+ + ATGS+
Sbjct: 291 SSISEATGSE 300
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 180 (68.4 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 44/162 (27%), Positives = 76/162 (46%)
Query: 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
A SGH V + P VS + DA+ K+WD G ++T GH + ++F +G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 75 WAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A+ S D T +L+D + + + M+ HD+ ++SVA +G +++ D +W
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDH---NVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ GH V + +DG +A+ S D +R+W
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 147 (56.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA-DQELAMYSHDNIICGITSVA 113
K GH S + V F P + S+DAT +++D D E + H + + ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD---SVQDIS 157
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
F SG+LL + D +WD E + GHD+ VS + + +G + + S D ++
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 174 IW 175
+W
Sbjct: 218 MW 219
Score = 144 (55.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V +S + S + D + KLWD + C +T GH+ ++++V PNG
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ S D T ++++++ + ++ H + V ++ G L+ + +D VW
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHRE---WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 137 KTERAGILAGHDNRVSCLGVTEDG----MAVATGS 167
E L H++ V C+ + ++ ATGS
Sbjct: 265 TKECKAELREHEHVVECISWAPESSYSSISEATGS 299
Score = 129 (50.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 27/100 (27%), Positives = 53/100 (53%)
Query: 36 VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95
+SG+ D + K+WD+ G C T GH++ + V F G + +DD T R++D + +
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 96 EL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+ + +H++ + TS+ F ++ ++ G D VW+
Sbjct: 372 CMKTLNAHEHFV---TSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 114 (45.2 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+GS D T +++D+ L + HDN + G V F G+ +L+ DD VWD
Sbjct: 313 SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG---VLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L H++ V+ L + V TGS D +++W
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 52 (23.4 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP---- 72
+GH V + D S + D + ++W + CK HE + +++ P
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Query: 73 NGWAFATGSD 82
+ + ATGS+
Sbjct: 291 SSISEATGSE 300
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 180 (68.4 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 44/162 (27%), Positives = 76/162 (46%)
Query: 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
A SGH V + P VS + DA+ K+WD G ++T GH + ++F +G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 75 WAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A+ S D T +L+D + + + M+ HD+ ++SVA +G +++ D +W
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDH---NVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ GH V + +DG +A+ S D +R+W
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 147 (56.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA-DQELAMYSHDNIICGITSVA 113
K GH S + V F P + S+DAT +++D D E + H + + ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD---SVQDIS 157
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
F SG+LL + D +WD E + GHD+ VS + + +G + + S D ++
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 174 IW 175
+W
Sbjct: 218 MW 219
Score = 144 (55.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V +S + S + D + KLWD + C +T GH+ ++++V PNG
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ S D T ++++++ + ++ H + V ++ G L+ + +D VW
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHRE---WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 137 KTERAGILAGHDNRVSCLGVTEDG----MAVATGS 167
E L H++ V C+ + ++ ATGS
Sbjct: 265 TKECKAELREHEHVVECISWAPESSYSSISEATGS 299
Score = 129 (50.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 27/100 (27%), Positives = 53/100 (53%)
Query: 36 VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95
+SG+ D + K+WD+ G C T GH++ + V F G + +DD T R++D + +
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 96 EL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+ + +H++ + TS+ F ++ ++ G D VW+
Sbjct: 372 CMKTLNAHEHFV---TSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 114 (45.2 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+GS D T +++D+ L + HDN + G V F G+ +L+ DD VWD
Sbjct: 313 SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG---VLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L H++ V+ L + V TGS D +++W
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 52 (23.4 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP---- 72
+GH V + D S + D + ++W + CK HE + +++ P
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Query: 73 NGWAFATGSD 82
+ + ATGS+
Sbjct: 291 SSISEATGSE 300
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 180 (68.4 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 44/162 (27%), Positives = 76/162 (46%)
Query: 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
A SGH V + P VS + DA+ K+WD G ++T GH + ++F +G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 75 WAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A+ S D T +L+D + + + M+ HD+ ++SVA +G +++ D +W
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDH---NVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ GH V + +DG +A+ S D +R+W
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 147 (56.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA-DQELAMYSHDNIICGITSVA 113
K GH S + V F P + S+DAT +++D D E + H + + ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD---SVQDIS 157
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
F SG+LL + D +WD E + GHD+ VS + + +G + + S D ++
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 174 IW 175
+W
Sbjct: 218 MW 219
Score = 144 (55.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V +S + S + D + KLWD + C +T GH+ ++++V PNG
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ S D T ++++++ + ++ H + V ++ G L+ + +D VW
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHRE---WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 137 KTERAGILAGHDNRVSCLGVTEDG----MAVATGS 167
E L H++ V C+ + ++ ATGS
Sbjct: 265 TKECKAELREHEHVVECISWAPESSYSSISEATGS 299
Score = 129 (50.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 27/100 (27%), Positives = 53/100 (53%)
Query: 36 VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95
+SG+ D + K+WD+ G C T GH++ + V F G + +DD T R++D + +
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 96 EL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+ + +H++ + TS+ F ++ ++ G D VW+
Sbjct: 372 CMKTLNAHEHFV---TSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 114 (45.2 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+GS D T +++D+ L + HDN + G V F G+ +L+ DD VWD
Sbjct: 313 SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG---VLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L H++ V+ L + V TGS D +++W
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 52 (23.4 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP---- 72
+GH V + D S + D + ++W + CK HE + +++ P
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Query: 73 NGWAFATGSD 82
+ + ATGS+
Sbjct: 291 SSISEATGSE 300
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 180 (68.4 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 44/162 (27%), Positives = 76/162 (46%)
Query: 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
A SGH V + P VS + DA+ K+WD G ++T GH + ++F +G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 75 WAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A+ S D T +L+D + + + M+ HD+ ++SVA +G +++ D +W
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDH---NVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ GH V + +DG +A+ S D +R+W
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 147 (56.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA-DQELAMYSHDNIICGITSVA 113
K GH S + V F P + S+DAT +++D D E + H + + ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD---SVQDIS 157
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
F SG+LL + D +WD E + GHD+ VS + + +G + + S D ++
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 174 IW 175
+W
Sbjct: 218 MW 219
Score = 144 (55.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V +S + S + D + KLWD + C +T GH+ ++++V PNG
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ S D T ++++++ + ++ H + V ++ G L+ + +D VW
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHRE---WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 137 KTERAGILAGHDNRVSCLGVTEDG----MAVATGS 167
E L H++ V C+ + ++ ATGS
Sbjct: 265 TKECKAELREHEHVVECISWAPESSYSSISEATGS 299
Score = 129 (50.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 27/100 (27%), Positives = 53/100 (53%)
Query: 36 VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95
+SG+ D + K+WD+ G C T GH++ + V F G + +DD T R++D + +
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 96 EL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+ + +H++ + TS+ F ++ ++ G D VW+
Sbjct: 372 CMKTLNAHEHFV---TSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 114 (45.2 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+GS D T +++D+ L + HDN + G V F G+ +L+ DD VWD
Sbjct: 313 SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG---VLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L H++ V+ L + V TGS D +++W
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 52 (23.4 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP---- 72
+GH V + D S + D + ++W + CK HE + +++ P
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Query: 73 NGWAFATGSD 82
+ + ATGS+
Sbjct: 291 SSISEATGSE 300
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 180 (68.4 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 44/162 (27%), Positives = 76/162 (46%)
Query: 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
A SGH V + P VS + DA+ K+WD G ++T GH + ++F +G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 75 WAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A+ S D T +L+D + + + M+ HD+ ++SVA +G +++ D +W
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDH---NVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ GH V + +DG +A+ S D +R+W
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 147 (56.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA-DQELAMYSHDNIICGITSVA 113
K GH S + V F P + S+DAT +++D D E + H + + ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD---SVQDIS 157
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
F SG+LL + D +WD E + GHD+ VS + + +G + + S D ++
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 174 IW 175
+W
Sbjct: 218 MW 219
Score = 144 (55.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V +S + S + D + KLWD + C +T GH+ ++++V PNG
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ S D T ++++++ + ++ H + V ++ G L+ + +D VW
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHRE---WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 137 KTERAGILAGHDNRVSCLGVTEDG----MAVATGS 167
E L H++ V C+ + ++ ATGS
Sbjct: 265 TKECKAELREHEHVVECISWAPESSYSSISEATGS 299
Score = 129 (50.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 27/100 (27%), Positives = 53/100 (53%)
Query: 36 VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95
+SG+ D + K+WD+ G C T GH++ + V F G + +DD T R++D + +
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 96 EL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+ + +H++ + TS+ F ++ ++ G D VW+
Sbjct: 372 CMKTLNAHEHFV---TSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 114 (45.2 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+GS D T +++D+ L + HDN + G V F G+ +L+ DD VWD
Sbjct: 313 SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG---VLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L H++ V+ L + V TGS D +++W
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 52 (23.4 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP---- 72
+GH V + D S + D + ++W + CK HE + +++ P
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Query: 73 NGWAFATGSD 82
+ + ATGS+
Sbjct: 291 SSISEATGSE 300
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 180 (68.4 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 44/162 (27%), Positives = 76/162 (46%)
Query: 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
A SGH V + P VS + DA+ K+WD G ++T GH + ++F +G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 75 WAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A+ S D T +L+D + + + M+ HD+ ++SVA +G +++ D +W
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDH---NVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ GH V + +DG +A+ S D +R+W
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 147 (56.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA-DQELAMYSHDNIICGITSVA 113
K GH S + V F P + S+DAT +++D D E + H + + ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD---SVQDIS 157
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
F SG+LL + D +WD E + GHD+ VS + + +G + + S D ++
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 174 IW 175
+W
Sbjct: 218 MW 219
Score = 144 (55.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V +S + S + D + KLWD + C +T GH+ ++++V PNG
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ S D T ++++++ + ++ H + V ++ G L+ + +D VW
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHRE---WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 137 KTERAGILAGHDNRVSCLGVTEDG----MAVATGS 167
E L H++ V C+ + ++ ATGS
Sbjct: 265 TKECKAELREHEHVVECISWAPESSYSSISEATGS 299
Score = 129 (50.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 27/100 (27%), Positives = 53/100 (53%)
Query: 36 VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95
+SG+ D + K+WD+ G C T GH++ + V F G + +DD T R++D + +
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 96 EL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+ + +H++ + TS+ F ++ ++ G D VW+
Sbjct: 372 CMKTLNAHEHFV---TSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 114 (45.2 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+GS D T +++D+ L + HDN + G V F G+ +L+ DD VWD
Sbjct: 313 SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG---VLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L H++ V+ L + V TGS D +++W
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 52 (23.4 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP---- 72
+GH V + D S + D + ++W + CK HE + +++ P
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Query: 73 NGWAFATGSD 82
+ + ATGS+
Sbjct: 291 SSISEATGSE 300
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 180 (68.4 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 44/162 (27%), Positives = 76/162 (46%)
Query: 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
A SGH V + P VS + DA+ K+WD G ++T GH + ++F +G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSG 162
Query: 75 WAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A+ S D T +L+D + + + M+ HD+ ++SVA +G +++ D +W
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDH---NVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ GH V + +DG +A+ S D +R+W
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 147 (56.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA-DQELAMYSHDNIICGITSVA 113
K GH S + V F P + S+DAT +++D D E + H + + ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD---SVEDIS 157
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
F SG+LL + D +WD E + GHD+ VS + + +G + + S D ++
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 174 IW 175
+W
Sbjct: 218 MW 219
Score = 142 (55.0 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V +S + S + D + KLWD + C +T GH+ ++++V PNG
Sbjct: 148 GHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ S D T ++++++ + ++ H + V ++ G L+ + +D VW
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHRE---WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 137 KTERAGILAGHDNRVSCLGVTEDG----MAVATGS 167
E L H++ V C+ + ++ ATGS
Sbjct: 265 TKECKAELREHEHVVECISWAPESSYSSISEATGS 299
Score = 129 (50.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 27/100 (27%), Positives = 53/100 (53%)
Query: 36 VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95
+SG+ D + K+WD+ G C T GH++ + V F G + +DD T R++D + +
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 96 EL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+ + +H++ + TS+ F ++ ++ G D VW+
Sbjct: 372 CMKTLNAHEHFV---TSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 114 (45.2 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+GS D T +++D+ L + HDN + G V F G+ +L+ DD VWD
Sbjct: 313 SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG---VLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L H++ V+ L + V TGS D +++W
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 52 (23.4 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP---- 72
+GH V + D S + D + ++W + CK HE + +++ P
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Query: 73 NGWAFATGSD 82
+ + ATGS+
Sbjct: 291 SSISEATGSE 300
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 180 (68.4 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 44/162 (27%), Positives = 76/162 (46%)
Query: 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
A SGH V + P VS + DA+ K+WD G ++T GH + ++F +G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 75 WAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A+ S D T +L+D + + + M+ HD+ ++SVA +G +++ D +W
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDH---NVSSVAIMPNGDHIVSAARDKTIKMW 219
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ GH V + +DG +A+ S D +R+W
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 144 (55.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA-DQELAMYSHDNIICGITSVA 113
K GH S + V F P + S+DAT +++D D E + H + + ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD---SVQDIS 157
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
F SG+LL + D +WD E + GHD+ VS + + +G + + + D ++
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIK 217
Query: 174 IW 175
+W
Sbjct: 218 MW 219
Score = 141 (54.7 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 37/155 (23%), Positives = 71/155 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V +S + S + D + KLWD + C +T GH+ ++++V PNG
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ + D T ++++++ + ++ H + V ++ G L+ + +D VW
Sbjct: 208 VSAARDKTIKMWEVQTGYCVKTFTGHRE---WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 137 KTERAGILAGHDNRVSCLGVTEDG----MAVATGS 167
E L H++ V C+ + ++ ATGS
Sbjct: 265 TKECKAELREHEHVVECISWAPESSYSSISEATGS 299
Score = 129 (50.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 27/100 (27%), Positives = 53/100 (53%)
Query: 36 VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95
+SG+ D + K+WD+ G C T GH++ + V F G + +DD T R++D + +
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 96 EL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+ + +H++ + TS+ F ++ ++ G D VW+
Sbjct: 372 CMKTLNAHEHFV---TSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 114 (45.2 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+GS D T +++D+ L + HDN + G V F G+ +L+ DD VWD
Sbjct: 313 SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG---VLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L H++ V+ L + V TGS D +++W
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 52 (23.4 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP---- 72
+GH V + D S + D + ++W + CK HE + +++ P
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Query: 73 NGWAFATGSD 82
+ + ATGS+
Sbjct: 291 SSISEATGSE 300
>TAIR|locus:2063349 [details] [associations]
symbol:AT2G05720 "AT2G05720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0006863 "purine nucleobase
transport" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003676 EMBL:AC007170 GO:GO:0030529 InterPro:IPR027106
PANTHER:PTHR19846 HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000157615
IPI:IPI00531184 PIR:C84471 RefSeq:NP_178635.1 UniGene:At.52653
ProteinModelPortal:Q9SIB8 SMR:Q9SIB8 STRING:Q9SIB8
EnsemblPlants:AT2G05720.1 GeneID:815121 KEGG:ath:AT2G05720
TAIR:At2g05720 InParanoid:Q9SIB8 OMA:YIIPAHV PhylomeDB:Q9SIB8
ArrayExpress:Q9SIB8 Genevestigator:Q9SIB8 Uniprot:Q9SIB8
Length = 276
Score = 174 (66.3 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 40/131 (30%), Positives = 67/131 (51%)
Query: 32 MRTF-VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFD 90
++TF S D+ A++WD+R F GH + +V F PNG+ A+G +D CR++D
Sbjct: 141 LQTFKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWD 200
Query: 91 IRADQELAMY-SHDNIICGITSVAFSRSGRLLLA-GYDDFNCNVWDSMKTERAGILAGHD 148
+R + L + +H N++ + V + R LA D N N+W L GH+
Sbjct: 201 LRMRKLLYIIPAHVNLV---SQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHE 257
Query: 149 NRVSCLGVTED 159
++V+ L + D
Sbjct: 258 SKVASLDIAVD 268
>TAIR|locus:2037798 [details] [associations]
symbol:PWP2 "AT1G15440" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0080008 HSSP:Q04724
HOGENOM:HOG000160363 KO:K14558 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003 EMBL:AY065425
EMBL:AY133789 IPI:IPI00543736 RefSeq:NP_172998.1 UniGene:At.28488
ProteinModelPortal:Q8VYZ5 SMR:Q8VYZ5 STRING:Q8VYZ5 PaxDb:Q8VYZ5
PRIDE:Q8VYZ5 EnsemblPlants:AT1G15440.1 GeneID:838115
KEGG:ath:AT1G15440 TAIR:At1g15440 InParanoid:Q8VYZ5
PhylomeDB:Q8VYZ5 ProtClustDB:CLSN2679476 ArrayExpress:Q8VYZ5
Genevestigator:Q8VYZ5 Uniprot:Q8VYZ5
Length = 900
Score = 185 (70.2 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 45/160 (28%), Positives = 76/160 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH DV ++ +PD + +GA D K+W++ G+C TF H + + A+ F + +
Sbjct: 387 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 446
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAG-YDDFNCNVWDSM 136
+ S D T R +D + + Y+ S+ SG ++ AG D F VW
Sbjct: 447 LSASLDGTVRAWDFKRYKNYKTYTTPTPR-QFVSLTADPSGDVVCAGTLDSFEIFVWSKK 505
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ IL+GH+ V L + +A+ SWD +R+W+
Sbjct: 506 TGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWD 545
Score = 118 (46.6 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 33/118 (27%), Positives = 56/118 (47%)
Query: 24 MSLSLAPDMRTFVSGACDA-SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD 82
+SL+ P +G D+ +W + G K GHE+ ++ + F P A+ S
Sbjct: 478 VSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSW 537
Query: 83 DATCRLFDIRADQ---ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
D T RL+D+ A + E ++HD + +VAF G+ L + D N WD+++
Sbjct: 538 DYTVRLWDVFASKGTVETFRHNHD-----VLTVAFRPDGKQLASSTLDGQINFWDTIE 590
Score = 110 (43.8 bits), Expect = 0.00095, P = 0.00095
Identities = 34/135 (25%), Positives = 60/135 (44%)
Query: 46 LWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS-HDN 104
+WD R + GH D+N VT+ P+ ATG+DD +++++ + ++ H N
Sbjct: 373 VWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTN 432
Query: 105 IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTED--GMA 162
+T++ F LL+ D WD + + R + +T D G
Sbjct: 433 ---AVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPR-QFVSLTADPSGDV 488
Query: 163 VATGSWDSF-LRIWN 176
V G+ DSF + +W+
Sbjct: 489 VCAGTLDSFEIFVWS 503
>WB|WBGene00020423 [details] [associations]
symbol:prp-19 species:6239 "Caenorhabditis elegans"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0005654
GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0040002 GO:GO:0000151
GeneTree:ENSGT00700000104487 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV EMBL:FO081619 PIR:T16846
ProteinModelPortal:Q10051 SMR:Q10051 DIP:DIP-26296N IntAct:Q10051
MINT:MINT-214042 STRING:Q10051 PaxDb:Q10051
EnsemblMetazoa:T10F2.4.1 EnsemblMetazoa:T10F2.4.2 UCSC:T10F2.4.1
WormBase:T10F2.4 InParanoid:Q10051 NextBio:889292 Uniprot:Q10051
Length = 492
Score = 181 (68.8 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 44/154 (28%), Positives = 77/154 (50%)
Query: 23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD 82
V S+ PD F +GA DA K+WD+++ + FPGH + + ++ F NG+ ATGS+
Sbjct: 341 VHSIEFHPDGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFSENGYYLATGSE 400
Query: 83 DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG 142
D +L+D+R + L ++++ I S++F +G L G V
Sbjct: 401 DGEVKLWDLRKLKNLKTFANEEKQ-PINSLSFDMTGTFL--GIGGQKVQVLHVKSWSEVV 457
Query: 143 ILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
L+ H V+ + E+ ++ T S D LR+++
Sbjct: 458 SLSDHSGPVTGVRFGENARSLVTCSLDKSLRVFS 491
Score = 174 (66.3 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 41/160 (25%), Positives = 72/160 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + ++ L PD T +S + D+ ++W D S K H++ + ++ +G
Sbjct: 249 GHNKKINAVVLHPDNITAISASADSHIRVWSATDSSSKAIIDVHQAPVTDISLNASGDYI 308
Query: 78 ATGSDDATCRLFDIRADQELAMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ SDD+ DIR+ + L S + + S+ F G + G D +WD
Sbjct: 309 LSASDDSYWAFSDIRSGKSLCKVSVEPGSQIAVHSIEFHPDGLIFGTGAADAVVKIWDLK 368
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
A GH V + +E+G +ATGS D +++W+
Sbjct: 369 NQTVAAAFPGHTAAVRSIAFSENGYYLATGSEDGEVKLWD 408
Score = 120 (47.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 37/145 (25%), Positives = 63/145 (43%)
Query: 36 VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95
++G D + L+D QTF GH INAV P+ + S D+ R++
Sbjct: 225 LTGGIDKTVVLYDYEKEQVMQTFKGHNKKINAVVLHPDNITAISASADSHIRVWSATDSS 284
Query: 96 ELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD--SMKTE-RAGILAGHDNRV 151
A+ H +T ++ + SG +L+ DD D S K+ + + G V
Sbjct: 285 SKAIIDVHQ---APVTDISLNASGDYILSASDDSYWAFSDIRSGKSLCKVSVEPGSQIAV 341
Query: 152 SCLGVTEDGMAVATGSWDSFLRIWN 176
+ DG+ TG+ D+ ++IW+
Sbjct: 342 HSIEFHPDGLIFGTGAADAVVKIWD 366
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 179 (68.1 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 44/162 (27%), Positives = 75/162 (46%)
Query: 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
A SGH V + P VS + DA+ K+WD G ++T GH + ++F G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTG 162
Query: 75 WAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A+ S D T +L+D + + + M+ HD+ ++SVA +G +++ D +W
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDH---NVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ GH V + +DG +A+ S D +R+W
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 144 (55.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA-DQELAMYSHDNIICGITSVA 113
K GH S + V F P + S+DAT +++D D E + H + + ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD---SVQDIS 157
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
F +G+LL + D +WD E + GHD+ VS + + +G + + S D ++
Sbjct: 158 FDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 174 IW 175
+W
Sbjct: 218 MW 219
Score = 143 (55.4 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V +S + S + D + KLWD + C +T GH+ ++++V PNG
Sbjct: 148 GHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ S D T ++++++ + ++ H + V ++ G L+ + +D VW
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHRE---WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 137 KTERAGILAGHDNRVSCLGVTEDG----MAVATGS 167
E L H++ V C+ + ++ ATGS
Sbjct: 265 TKECKAELREHEHVVECISWAPESSYSTISEATGS 299
Score = 131 (51.2 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 28/100 (28%), Positives = 53/100 (53%)
Query: 36 VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95
+SG+ D + K+WDI G C T GH++ + V F G + +DD T R++D + +
Sbjct: 312 LSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKR 371
Query: 96 EL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+ + +H++ + TS+ F ++ ++ G D VW+
Sbjct: 372 CMKTLNAHEHFV---TSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 116 (45.9 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 32/99 (32%), Positives = 49/99 (49%)
Query: 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+GS D T +++DI L + HDN + G V F G+ +L+ DD VWD K
Sbjct: 313 SGSRDKTIKMWDISTGMCLMTLVGHDNWVRG---VLFHSGGKFILSCADDKTLRVWD-FK 368
Query: 138 TERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+R L H++ V+ L + V TGS D +++W
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 53 (23.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 14/66 (21%), Positives = 29/66 (43%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH V + D S + D + ++W + CK HE + +++ P +
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES-S 289
Query: 77 FATGSD 82
++T S+
Sbjct: 290 YSTISE 295
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 179 (68.1 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 44/162 (27%), Positives = 75/162 (46%)
Query: 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
A SGH V + P VS + DA+ K+WD G ++T GH + ++F G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTG 162
Query: 75 WAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A+ S D T +L+D + + + M+ HD+ ++SVA +G +++ D +W
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDH---NVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ GH V + +DG +A+ S D +R+W
Sbjct: 220 EVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVW 261
Score = 142 (55.0 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA-DQELAMYSHDNIICGITSVA 113
K GH S + V F P + S+DAT +++D D E + H + + ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTD---SVQDIS 157
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
F +G+LL + D +WD E + GHD+ VS + + +G + + S D ++
Sbjct: 158 FDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 174 IW 175
+W
Sbjct: 218 MW 219
Score = 142 (55.0 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 34/138 (24%), Positives = 63/138 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V +S + S + D + KLWD + C +T GH+ ++++V PNG
Sbjct: 148 GHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ S D T +++++ + ++ H + V ++ G L+ + +D VW
Sbjct: 208 VSASRDKTIKMWEVATGYCVKTFTGHRE---WVRMVRPNQDGTLIASSSNDQTVRVWVVA 264
Query: 137 KTERAGILAGHDNRVSCL 154
E L H++ V C+
Sbjct: 265 TKECKAELREHEHVVECI 282
Score = 129 (50.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 27/100 (27%), Positives = 52/100 (52%)
Query: 36 VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95
+SG+ D + K+WD+ G C T GH++ + V P G + +DD T R++D + +
Sbjct: 312 LSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKR 371
Query: 96 -ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+ +H++ + TS+ F ++ ++ G D VW+
Sbjct: 372 CTKTLSAHEHFV---TSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 104 (41.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 26/98 (26%), Positives = 46/98 (46%)
Query: 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+GS D T +++D+ L + HDN + G V G+ +++ DD +WD
Sbjct: 313 SGSRDKTIKMWDVSIGMCLMTLVGHDNWVRG---VLVHPGGKYIVSCADDKTLRIWDYKN 369
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L+ H++ V+ L + V TGS D +++W
Sbjct: 370 KRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 53 (23.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 12/56 (21%), Positives = 23/56 (41%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP 72
+GH V + D S + D + ++W + CK HE + +++ P
Sbjct: 231 TGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 176 (67.0 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 48/176 (27%), Positives = 86/176 (48%)
Query: 6 DKSALLGSPAAS--GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHES 63
D S +G+ S GH+ + +S++ D +SG+ D S +LWD+ G ++F GH S
Sbjct: 56 DDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTS 115
Query: 64 DINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGR---L 120
D+ +V+F P+ + S D T +L++ A + + + IT V FS S +
Sbjct: 116 DVFSVSFSPDNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDW-ITCVRFSPSPNQAII 174
Query: 121 LLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ G+D VW+ + L GH ++ + ++ DG A+G D ++W+
Sbjct: 175 VSCGWDKL-VKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWD 229
Score = 147 (56.8 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 46/191 (24%), Positives = 91/191 (47%)
Query: 1 MCDHLDKSAL-LGSPAASGHTGDVMSLSLA--PDMRTFVSGACDASAKLWDIRD------ 51
M D++ ++ + L GH+ V S+S P ++T VS + D +W+I
Sbjct: 1 MMDNIKEAEISLRGVLEGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGE 60
Query: 52 -GSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY-SHDNIICGI 109
G+ K++ GH IN V+ +G +GS D + RL+D+ + + + H + +
Sbjct: 61 IGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTS---DV 117
Query: 110 TSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL-AGHDNRVSCLGVT---EDGMAVAT 165
SV+FS R +++ D +W+++ + I H + ++C+ + + V+
Sbjct: 118 FSVSFSPDNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSC 177
Query: 166 GSWDSFLRIWN 176
G WD +++WN
Sbjct: 178 G-WDKLVKVWN 187
Score = 143 (55.4 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 47/165 (28%), Positives = 70/165 (42%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG--HESDINAVTFFP--N 73
GHT DV S+S +PD R VS + D + KLW+ CK T H I V F P N
Sbjct: 112 GHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTL-AQCKYTITDQQHTDWITCVRFSPSPN 170
Query: 74 GWAFATGSDDATCRLFDIR-ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNV 132
+ D ++++++ D + H ++ +V S G L +G D +
Sbjct: 171 QAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVL---NTVTISPDGSLCASGGKDGVAKL 227
Query: 133 WDSMKTERAGIL-AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
WD + + L G C + + AT D F+RIWN
Sbjct: 228 WDVKEGKHLYSLETGSTINSLCFSPCDYWLCAAT---DRFIRIWN 269
Score = 126 (49.4 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 37/125 (29%), Positives = 66/125 (52%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP-NGWA 76
GHTG + +++++PD SG D AKLWD+++G + S IN++ F P + W
Sbjct: 199 GHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETG-STINSLCFSPCDYWL 257
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGI---TSVAFSRSGRLLLAGYDDFNCNV 132
A + D R++++ + ++ +Y G+ TS+ +S +G+LL G D N V
Sbjct: 258 CA--ATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYV 315
Query: 133 WDSMK 137
++ K
Sbjct: 316 YEVKK 320
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 176 (67.0 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 48/176 (27%), Positives = 86/176 (48%)
Query: 6 DKSALLGSPAAS--GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHES 63
D S +G+ S GH+ + +S++ D +SG+ D S +LWD+ G ++F GH S
Sbjct: 56 DDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTS 115
Query: 64 DINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGR---L 120
D+ +V+F P+ + S D T +L++ A + + + IT V FS S +
Sbjct: 116 DVFSVSFSPDNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDW-ITCVRFSPSPNQAII 174
Query: 121 LLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ G+D VW+ + L GH ++ + ++ DG A+G D ++W+
Sbjct: 175 VSCGWDKL-VKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWD 229
Score = 147 (56.8 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 46/191 (24%), Positives = 91/191 (47%)
Query: 1 MCDHLDKSAL-LGSPAASGHTGDVMSLSLA--PDMRTFVSGACDASAKLWDIRD------ 51
M D++ ++ + L GH+ V S+S P ++T VS + D +W+I
Sbjct: 1 MMDNIKEAEISLRGVLEGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGE 60
Query: 52 -GSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY-SHDNIICGI 109
G+ K++ GH IN V+ +G +GS D + RL+D+ + + + H + +
Sbjct: 61 IGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTS---DV 117
Query: 110 TSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL-AGHDNRVSCLGVT---EDGMAVAT 165
SV+FS R +++ D +W+++ + I H + ++C+ + + V+
Sbjct: 118 FSVSFSPDNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSC 177
Query: 166 GSWDSFLRIWN 176
G WD +++WN
Sbjct: 178 G-WDKLVKVWN 187
Score = 143 (55.4 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 47/165 (28%), Positives = 70/165 (42%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG--HESDINAVTFFP--N 73
GHT DV S+S +PD R VS + D + KLW+ CK T H I V F P N
Sbjct: 112 GHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTL-AQCKYTITDQQHTDWITCVRFSPSPN 170
Query: 74 GWAFATGSDDATCRLFDIR-ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNV 132
+ D ++++++ D + H ++ +V S G L +G D +
Sbjct: 171 QAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVL---NTVTISPDGSLCASGGKDGVAKL 227
Query: 133 WDSMKTERAGIL-AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
WD + + L G C + + AT D F+RIWN
Sbjct: 228 WDVKEGKHLYSLETGSTINSLCFSPCDYWLCAAT---DRFIRIWN 269
Score = 126 (49.4 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 37/125 (29%), Positives = 66/125 (52%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP-NGWA 76
GHTG + +++++PD SG D AKLWD+++G + S IN++ F P + W
Sbjct: 199 GHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETG-STINSLCFSPCDYWL 257
Query: 77 FATGSDDATCRLFDIRADQELA-MYSHDNIICGI---TSVAFSRSGRLLLAGYDDFNCNV 132
A + D R++++ + ++ +Y G+ TS+ +S +G+LL G D N V
Sbjct: 258 CA--ATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYV 315
Query: 133 WDSMK 137
++ K
Sbjct: 316 YEVKK 320
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 180 (68.4 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 48/142 (33%), Positives = 70/142 (49%)
Query: 36 VSGACDASAKLWD-IRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94
VSG+ D + LW D GH++ IN V F P+ A+ S D + +L+D R
Sbjct: 345 VSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTG 404
Query: 95 QELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSC 153
+ LA + H + + +A+S RLL++G D VWD + A L GH + V
Sbjct: 405 KYLASLRGH---VAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYA 461
Query: 154 LGVTEDGMAVATGSWDSFLRIW 175
+ + DG VA+G D LRIW
Sbjct: 462 VDWSPDGQRVASGGKDKCLRIW 483
Score = 153 (58.9 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 39/162 (24%), Positives = 77/162 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V+S++ +P + SG+ D + + WD+ + T GH + ++++ P+G
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKL 171
Query: 78 ATGSDDATCRLFDIRADQELA--MYSHDNIICGIT--SVAFSRSGRLLLAGYDDFNCNVW 133
A+G + L+D ++ + H I G++ + + R + + D + VW
Sbjct: 172 ASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVW 231
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
D+ IL GH V+CL DG+ + + S D +++W
Sbjct: 232 DTTAGRCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 272
Score = 126 (49.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V ++ + D R VSG+ D++ K+WD++ PGH ++ AV + P+G
Sbjct: 412 GHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRV 471
Query: 78 ATGSDDATCRLF 89
A+G D R++
Sbjct: 472 ASGGKDKCLRIW 483
Score = 121 (47.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 45/161 (27%), Positives = 71/161 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + M+LS +RT +A+ D++ GS K+ S N V
Sbjct: 287 GHWVNTMALSTDYALRTGAFEPAEATVNAQDLQ-GSLKELKERASSRYNLVRG-QGPERL 344
Query: 78 ATGSDDATCRLFDIRADQE-LA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+GSDD T L+ D++ LA M H +I V FS R++ + D + +WD
Sbjct: 345 VSGSDDFTLFLWSPAEDKKPLARMTGHQALI---NQVLFSPDSRIVASASFDKSIKLWDG 401
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L GH V + + D + +GS DS L++W+
Sbjct: 402 RTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWD 442
Score = 118 (46.6 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 41/167 (24%), Positives = 76/167 (45%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT V L D + S + D + K+W DG +T GH +N + + +A
Sbjct: 243 TGHTQSVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD-YA 300
Query: 77 FATGS---DDATCRLFDIRAD-QELA--MYSHDNIICGITSVAFSRSGRLLLAGYDDFNC 130
TG+ +AT D++ +EL S N++ G + L++G DDF
Sbjct: 301 LRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRG-------QGPERLVSGSDDFTL 353
Query: 131 NVWDSMKTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+W + ++ + GH ++ + + D VA+ S+D +++W+
Sbjct: 354 FLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWD 400
Score = 116 (45.9 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 33/130 (25%), Positives = 58/130 (44%)
Query: 54 CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSV 112
C + GH + +V F P G A+GS D T R +D+ + H + + S+
Sbjct: 106 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRH---WVLSI 162
Query: 113 AFSRSGRLLLAGYDDFNCNVWDSMKTERAG-ILAGHDNRVSCLG-----VTEDGMAVATG 166
++S G+ L +G + +WD + G L GH ++ L + + VA+
Sbjct: 163 SWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASS 222
Query: 167 SWDSFLRIWN 176
S D +R+W+
Sbjct: 223 SKDGSVRVWD 232
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 180 (68.4 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 47/142 (33%), Positives = 70/142 (49%)
Query: 36 VSGACDASAKLWD-IRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94
VSG+ D + LW D GH++ IN V F P+ A+ S D + +L+D R
Sbjct: 346 VSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTG 405
Query: 95 QELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSC 153
+ LA + H + + +A+S RLL++G D VWD + + L GH + V
Sbjct: 406 KYLASLRGH---VAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYA 462
Query: 154 LGVTEDGMAVATGSWDSFLRIW 175
+ + DG VA+G D LRIW
Sbjct: 463 VDWSPDGQRVASGGKDKCLRIW 484
Score = 146 (56.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 38/162 (23%), Positives = 77/162 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V+S++ +P + SG+ D + + WD+ + T GH + ++++ P+G
Sbjct: 113 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKL 172
Query: 78 ATGSDDATCRLFDIRADQEL--AMYSHDNIICGIT--SVAFSRSGRLLLAGYDDFNCNVW 133
A+G + L+D +++ A+ H I ++ + + R + + D + VW
Sbjct: 173 ASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVW 232
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
D+ L GH V+CL DG+ + + S D +++W
Sbjct: 233 DTTAGRCERTLTGHAQSVTCLRWGGDGL-LYSASQDRTIKVW 273
Score = 127 (49.8 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V ++ + D R VSG+ D++ K+WD++ PGH ++ AV + P+G
Sbjct: 413 GHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRV 472
Query: 78 ATGSDDATCRLF 89
A+G D R++
Sbjct: 473 ASGGKDKCLRIW 484
Score = 123 (48.4 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 33/130 (25%), Positives = 58/130 (44%)
Query: 54 CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSV 112
C + GH + +V F P G A+GS D T R +D+ + H + + S+
Sbjct: 107 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRH---WVLSI 163
Query: 113 AFSRSGRLLLAGYDDFNCNVWDSMKTERAG-ILAGHDNRVSCLG-----VTEDGMAVATG 166
++S G+ L +G + +WD ++ G L GH ++ L + VA+
Sbjct: 164 SWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASS 223
Query: 167 SWDSFLRIWN 176
S D +R+W+
Sbjct: 224 SKDGSVRVWD 233
Score = 122 (48.0 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 46/161 (28%), Positives = 71/161 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + M+LS +RT +AS D+R GS ++ S N V
Sbjct: 288 GHWVNTMALSTDYALRTGAFEPAEASVNAQDLR-GSLQELKERALSRYNLVRG-QGPERL 345
Query: 78 ATGSDDATCRLFDIRADQE-LA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+GSDD T L+ D++ LA M H +I V FS R++ + D + +WD
Sbjct: 346 VSGSDDFTLFLWSPAEDKKPLARMTGHQALI---NQVVFSPDSRVIASASFDKSIKLWDG 402
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L GH V + + D + +GS DS L++W+
Sbjct: 403 RTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWD 443
Score = 119 (46.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 40/167 (23%), Positives = 75/167 (44%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH V L D + S + D + K+W DG +T GH +N + + +A
Sbjct: 244 TGHAQSVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD-YA 301
Query: 77 FATGS---DDATCRLFDIRAD-QELA--MYSHDNIICGITSVAFSRSGRLLLAGYDDFNC 130
TG+ +A+ D+R QEL S N++ G + L++G DDF
Sbjct: 302 LRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRG-------QGPERLVSGSDDFTL 354
Query: 131 NVWDSMKTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+W + ++ + GH ++ + + D +A+ S+D +++W+
Sbjct: 355 FLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWD 401
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 179 (68.1 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 48/142 (33%), Positives = 71/142 (50%)
Query: 36 VSGACDASAKLWDIRDGSCKQT-FPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94
VSG+ D + LW + T GH++ IN V F P+ A+ S D + +L+D R
Sbjct: 345 VSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTG 404
Query: 95 QELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSC 153
+ LA + H + + +A+S RLL++G D VWD + A L GH + V
Sbjct: 405 KYLASLRGH---VAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYA 461
Query: 154 LGVTEDGMAVATGSWDSFLRIW 175
+ + DG VA+G D LRIW
Sbjct: 462 VDWSPDGQRVASGGKDKCLRIW 483
Score = 153 (58.9 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 38/162 (23%), Positives = 78/162 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V+S++ +P + SG+ D + + WD+ + T GH + ++++ P+G
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKL 171
Query: 78 ATGSDDATCRLFDIRADQELA--MYSHDNIICGIT--SVAFSRSGRLLLAGYDDFNCNVW 133
A+G + L+D +++ + H I G++ + + R + + D + +W
Sbjct: 172 ASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIW 231
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
D+ IL GH V+CL DG+ + + S D +++W
Sbjct: 232 DTTAGRCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 272
Score = 129 (50.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 32/117 (27%), Positives = 59/117 (50%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH + + +PD R S + D S KLWD R G + GH + + + + +
Sbjct: 369 TGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRL 428
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
+GS D+T +++D++A Q+LAM + + +V +S G+ + +G D +W
Sbjct: 429 LVSGSSDSTLKVWDVKA-QKLAMDLPGHAD-EVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 127 (49.8 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 36/130 (27%), Positives = 59/130 (45%)
Query: 54 CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSV 112
C + GH + +V F P G A+GS D T R +D+ + H + + S+
Sbjct: 106 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRH---WVLSI 162
Query: 113 AFSRSGRLLLAGYDDFNCNVWDSMKTERAG-ILAGHDNRVSCLG-----VTEDGMAVATG 166
++S GR L +G + +WD ++ G LAGH ++ L + VA+
Sbjct: 163 SWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASS 222
Query: 167 SWDSFLRIWN 176
S D +RIW+
Sbjct: 223 SKDGSVRIWD 232
Score = 115 (45.5 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 41/167 (24%), Positives = 76/167 (45%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT V L D + S + D + K+W DG +T GH +N + + +A
Sbjct: 243 TGHTQSVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD-YA 300
Query: 77 FATGS---DDATCRLFDIRAD-QELA--MYSHDNIICGITSVAFSRSGRLLLAGYDDFNC 130
TG+ +A+ D++ QEL S N++ G + L++G DDF
Sbjct: 301 LRTGAFEPAEASVNPQDLQGSLQELKERALSRYNLVRG-------QGPERLVSGSDDFTL 353
Query: 131 NVWDSMKTERAGI-LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+W + ++ + GH ++ + + D VA+ S+D +++W+
Sbjct: 354 FLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWD 400
Score = 112 (44.5 bits), Expect = 0.00024, P = 0.00024
Identities = 43/161 (26%), Positives = 69/161 (42%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + M+LS +RT +AS D++ GS ++ S N V
Sbjct: 287 GHWVNTMALSTDYALRTGAFEPAEASVNPQDLQ-GSLQELKERALSRYNLVRG-QGPERL 344
Query: 78 ATGSDDATCRLFDIRADQE--LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+GSDD T L+ D++ M H +I V FS R++ + D + +WD
Sbjct: 345 VSGSDDFTLFLWSPAEDKKPLTRMTGHQALI---NQVLFSPDSRIVASASFDKSIKLWDG 401
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L GH V + + D + +GS DS L++W+
Sbjct: 402 RTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWD 442
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 176 (67.0 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 42/160 (26%), Positives = 74/160 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V + + +M+ SG+ D+ +W ++ S F GH+ + V F P+G
Sbjct: 48 GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 107
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+GS D T R++ E ++ +H + SV F G+ + DD VW +
Sbjct: 108 ASGSRDKTVRIWVPNIKGESTVFRAHT---ATVRSVHFCSDGQSFVTASDDKTIKVWSTH 164
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + L+ H N V C + DG + + S D +++W+
Sbjct: 165 RQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 204
Score = 166 (63.5 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 41/159 (25%), Positives = 67/159 (42%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
S H V +PD R VS + D + KLWD C ++ H + V F P+G
Sbjct: 173 SQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTC 232
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A D T +++D+R + L Y + + +++F SG L+ D + D M
Sbjct: 233 VAAAGMDNTVKVWDVRTHRLLQHYQLHS--AAVNALSFHPSGNYLVTASSDSTLKILDLM 290
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ L GH + + + G A+G D + +W
Sbjct: 291 EGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 164 (62.8 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 41/162 (25%), Positives = 73/162 (45%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLW--DIRDGSCKQTFPGHESDINAVTFFPNG 74
+GH V ++ +P SG+ D + ++W +I+ S F H + + +V F +G
Sbjct: 89 TGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGEST--VFRAHTATVRSVHFCSDG 146
Query: 75 WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
+F T SDD T +++ + L +S I + FS GRL+++ DD +WD
Sbjct: 147 QSFVTASDDKTIKVWSTHRQKFL--FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 204
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
E H V+ + G VA D+ +++W+
Sbjct: 205 KTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWD 246
Score = 149 (57.5 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 35/118 (29%), Positives = 56/118 (47%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
H G V + P + D + K+WD+R Q + H + +NA++F P+G
Sbjct: 217 HGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 276
Query: 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
T S D+T ++ D+ + L ++ H T+VAFSR+G +G D VW S
Sbjct: 277 TASSDSTLKILDLMEGRLLYTLHGHQG---PATTVAFSRTGEYFASGGSDEQVMVWKS 331
Score = 122 (48.0 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 34/128 (26%), Positives = 58/128 (45%)
Query: 51 DGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS-HDNIICGI 109
D S ++ F GH + V F N A+GS D+ ++ ++ ++ H + +
Sbjct: 39 DPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKD---AV 95
Query: 110 TSVAFSRSGRLLLAGYDDFNCNVW-DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW 168
T V FS SG LL +G D +W ++K E + H V + DG + T S
Sbjct: 96 TCVNFSPSGHLLASGSRDKTVRIWVPNIKGEST-VFRAHTATVRSVHFCSDGQSFVTASD 154
Query: 169 DSFLRIWN 176
D +++W+
Sbjct: 155 DKTIKVWS 162
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 174 (66.3 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 43/173 (24%), Positives = 81/173 (46%)
Query: 6 DKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDI 65
DKS + +GH+ V + L+ D + +SG+ D +LWD+ G + F GH D+
Sbjct: 49 DKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDV 108
Query: 66 NAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRL--LLA 123
+V F + + S D T +L++ + + + D ++ V FS + + +++
Sbjct: 109 LSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVS 168
Query: 124 GYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D VW+ + LAGH ++ + V+ DG A+G D + +W+
Sbjct: 169 ASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWD 221
Score = 123 (48.4 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 33/121 (27%), Positives = 59/121 (48%)
Query: 16 ASGHTGDVMSLSLAPD--MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN 73
A GH V + +P+ + T VS + D + K+W++++ + T GH +N V P+
Sbjct: 145 ADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPD 204
Query: 74 GWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
G A+G D L+D+ ++L +II S+ FS + L A ++ + +W
Sbjct: 205 GSLCASGGKDGVILLWDLAEGKKLYSLEAGSII---HSLCFSPNRYWLCAATEN-SIRIW 260
Query: 134 D 134
D
Sbjct: 261 D 261
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 180 (68.4 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 44/161 (27%), Positives = 76/161 (47%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT + SL ++ V+G+ S ++WD+ +T GH+++I ++ F P G
Sbjct: 60 TGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSF 119
Query: 77 FATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
A+GS D +L+D+R + Y SH + + FS G+ L + DD +WD
Sbjct: 120 VASGSLDTDIKLWDVRRKGCIFKYKSHTQ---AVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ GH V+ + +A+GS D +R W+
Sbjct: 177 TAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWD 217
Score = 171 (65.3 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 45/158 (28%), Positives = 67/158 (42%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH ++ SL P SG+ D KLWD+R C + H + + F P+G
Sbjct: 103 GHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWL 162
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
A+ +DD T +L+D+ A + M+ + V F S LL +G D WD K
Sbjct: 163 ASAADDHTVKLWDLTAGK--VMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEK 220
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ V C+ DG + G DS LR++
Sbjct: 221 FHVVSCIEEEATPVRCILFNPDGCCLYGGFQDS-LRVY 257
Score = 152 (58.6 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 43/158 (27%), Positives = 73/158 (46%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
HT V L +PD + S A D + KLWD+ G F GH +N V F P+ + A
Sbjct: 146 HTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLA 205
Query: 79 TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT 138
+GS D T R +D+ ++ + + + F+ G L G+ D + V+ +
Sbjct: 206 SGSSDRTIRFWDLEKFHVVSCIEEE--ATPVRCILFNPDGCCLYGGFQD-SLRVY-GWEP 261
Query: 139 ERA-GILAGHDNRVSCLGVTED---GMAVATGSWDSFL 172
ER ++ + +V+ L V + G++ A + SF+
Sbjct: 262 ERCFDVVVVNWGKVADLSVCHNQLIGVSFAQSTVSSFV 299
Score = 143 (55.4 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 38/160 (23%), Positives = 68/160 (42%)
Query: 19 HTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
H+ +V SL L R +G D +W + +C + GH + I ++
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELI 78
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
GS + R++D+ A + L + H IC S+ F G + +G D + +WD
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLLGHKANIC---SLDFHPYGSFVASGSLDTDIKLWDVR 135
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ H V CL + DG +A+ + D +++W+
Sbjct: 136 RKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWD 175
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 176 (67.0 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 42/160 (26%), Positives = 73/160 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V + + + + SG+ D++ +W ++ S F GH+ + V F P+G
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+GS D T R++ E ++ +H + SV F G+ L+ DD VW +
Sbjct: 77 ASGSRDKTVRIWVPNVKGESTVFRAHT---ATVRSVHFCSDGQSLVTASDDKTVKVWSTH 133
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L H N V C + DG + + S D +++W+
Sbjct: 134 RQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Score = 161 (61.7 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 40/157 (25%), Positives = 65/157 (41%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
H V +PD R VS + D + KLWD C ++ H + V F P+G A
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIA 203
Query: 79 TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT 138
D T +++D R + L Y + + +++F SG L+ D + D M+
Sbjct: 204 AAGMDNTVKVWDARTHRLLQHYQLHS--AAVNALSFHPSGNYLITASSDSTLKILDLMEG 261
Query: 139 ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L GH + + + G A+G D + +W
Sbjct: 262 RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 154 (59.3 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 37/160 (23%), Positives = 68/160 (42%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH V ++ +P SG+ D + ++W F H + + +V F +G +
Sbjct: 58 TGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQS 117
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
T SDD T +++ + L +S I + FS GRL+++ DD +WD
Sbjct: 118 LVTASDDKTVKVWSTHRQRFL--FSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
E H V+ + G +A D+ +++W+
Sbjct: 176 SRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD 215
Score = 145 (56.1 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 35/118 (29%), Positives = 55/118 (46%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
H G V + P + D + K+WD R Q + H + +NA++F P+G
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLI 245
Query: 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
T S D+T ++ D+ + L ++ H T+VAFSR+G +G D VW S
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQG---PATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 131 (51.2 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 35/128 (27%), Positives = 60/128 (46%)
Query: 51 DGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS-HDNIICGI 109
D S ++ F GH + V F N A+GS D+T ++ ++ ++ H + +
Sbjct: 8 DPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKD---AV 64
Query: 110 TSVAFSRSGRLLLAGYDDFNCNVW-DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW 168
T V FS SG LL +G D +W ++K E + H V + DG ++ T S
Sbjct: 65 TCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVHFCSDGQSLVTASD 123
Query: 169 DSFLRIWN 176
D +++W+
Sbjct: 124 DKTVKVWS 131
>ZFIN|ZDB-GENE-030131-333 [details] [associations]
symbol:wdr82 "WD repeat domain containing 82"
species:7955 "Danio rerio" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR002108 InterPro:IPR015943 Pfam:PF00241 Pfam:PF00400
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51263 SMART:SM00102
SMART:SM00320 ZFIN:ZDB-GENE-030131-333 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005622
OrthoDB:EOG4TTGJJ EMBL:AY423022 IPI:IPI00492504
ProteinModelPortal:Q6TEM7 SMR:Q6TEM7 PRIDE:Q6TEM7
HOGENOM:HOG000170291 InParanoid:Q6TEM7 ArrayExpress:Q6TEM7
Bgee:Q6TEM7 Uniprot:Q6TEM7
Length = 600
Score = 179 (68.1 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 47/165 (28%), Positives = 77/165 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V++LS++P TF+SG+ D + +LWD+R +C+ H +F P G F
Sbjct: 105 GHNKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLM--HLQGKPVCSFDPEGLIF 162
Query: 78 ATGSDDATCRLFDIRA-DQ-ELAMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
A G + +L+D+R+ D+ A + C T + FS G+L+L + V D
Sbjct: 163 AAGVNSEMVKLYDLRSFDKGPFATFKLQYERTCEWTGLKFSNDGKLILVSTNGGTLRVLD 222
Query: 135 SMKTERAGILAGHDNRVSCL---GVTEDGMAVATGSWDSFLRIWN 176
+ K G++N + T D + GS D + +WN
Sbjct: 223 AFKGAVLHSFGGYNNSKGVILEASFTPDSQFIMIGSEDGKIHVWN 267
>ASPGD|ASPL0000054735 [details] [associations]
symbol:AN0292 species:162425 "Emericella nidulans"
[GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 HOGENOM:HOG000212424 ProteinModelPortal:C8VUA4
EnsemblFungi:CADANIAT00002423 OMA:GGIWSLS Uniprot:C8VUA4
Length = 606
Score = 179 (68.1 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 49/162 (30%), Positives = 76/162 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT-FPGHESDINAVTFFPNGWA 76
GH V L P FVSG D +A+LW + D +Q F GHE D++ V F PN
Sbjct: 359 GHDQPVWDLQWGPFGHYFVSGGHDKTARLW-VTDHIRQQRIFVGHEQDVDCVCFHPNSAY 417
Query: 77 FATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
TGS D T R++ + + M++ H IT++A SR G+ L + D + +WD
Sbjct: 418 VFTGSSDRTVRMWAVTTGNAVRMFTGHTG---NITALACSRDGKTLASADDHGSILLWDL 474
Query: 136 MKTERAGILAGHDNR-VSCLGVTEDGMAVATGSWDSFLRIWN 176
+ GH + L + + + +G D +R+W+
Sbjct: 475 GPGRLLKRMRGHGKGGIWSLSWSVESNVLVSGGADGTVRVWD 516
Score = 132 (51.5 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 37/173 (21%), Positives = 70/173 (40%)
Query: 18 GHTGDVMSLSLAP------------DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDI 65
GH+G V +++ AP + R +S + D + +LW + C + GH+ +
Sbjct: 305 GHSGPVYAVAFAPSATPSENAVAPTNARWLLSSSADRTIRLWSLDLWQCMVVYKGHDQPV 364
Query: 66 NAVTFFPNGWAFATGSDDATCRLF--DIRADQELAMYSHDNIICGITSVAFSRSGRLLLA 123
+ + P G F +G D T RL+ D Q + + ++ C V F + +
Sbjct: 365 WDLQWGPFGHYFVSGGHDKTARLWVTDHIRQQRIFVGHEQDVDC----VCFHPNSAYVFT 420
Query: 124 GYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
G D +W + GH ++ L + DG +A+ + +W+
Sbjct: 421 GSSDRTVRMWAVTTGNAVRMFTGHTGNITALACSRDGKTLASADDHGSILLWD 473
Score = 130 (50.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 33/120 (27%), Positives = 57/120 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH DV + P+ +G+ D + ++W + G+ + F GH +I A+ +G
Sbjct: 401 GHEQDVDCVCFHPNSAYVFTGSSDRTVRMWAVTTGNAVRMFTGHTGNITALACSRDGKTL 460
Query: 78 ATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+ D + L+D+ + L M H GI S+++S +L++G D VWD M
Sbjct: 461 ASADDHGSILLWDLGPGRLLKRMRGHGK--GGIWSLSWSVESNVLVSGGADGTVRVWDVM 518
>UNIPROTKB|Q9AV81 [details] [associations]
symbol:PUB72 "U-box domain-containing protein 72"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005618 GO:GO:0009507
GO:GO:0046686 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0042742 eggNOG:COG2319 EMBL:DP000086
EMBL:AP008216 EMBL:CM000147 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
ProtClustDB:CLSN2687671 EMBL:AC022457 EMBL:AK064778
RefSeq:NP_001064804.1 UniGene:Os.37656 ProteinModelPortal:Q9AV81
STRING:Q9AV81 PRIDE:Q9AV81 GeneID:4348844 KEGG:dosa:Os10t0466300-01
KEGG:osa:4348844 Gramene:Q9AV81 Uniprot:Q9AV81
Length = 527
Score = 178 (67.7 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 44/163 (26%), Positives = 73/163 (44%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWD-IRDGS--CKQTFPGHESDINAVTFFPN 73
+GH+ + SL P FV+G+ D + K+W +G+ C T H +++ AVT
Sbjct: 260 TGHSKKITSLKFVPRDELFVTGSADKTVKIWQGSEEGNYNCIHTLKDHTAEVEAVTVHAT 319
Query: 74 GWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
F T S D T +DI + L + G TS +F G +L G + +W
Sbjct: 320 QKYFVTASKDNTWCFYDIPSGSCLTQVGESSGQEGYTSASFHPDGLILGTGTTEAVVKIW 379
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D GH V+ + +E+G +AT + D +++W+
Sbjct: 380 DVKTQSNVAKFEGHVGPVTAMSFSENGYFLATAALDG-VKLWD 421
Score = 143 (55.4 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 51/167 (30%), Positives = 75/167 (44%)
Query: 16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW 75
+SG G S S PD +G +A K+WD++ S F GH + A++F NG+
Sbjct: 349 SSGQEG-YTSASFHPDGLILGTGTTEAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSENGY 407
Query: 76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFN----CN 131
AT + D +L+D+R + S + SV F SG L G D N
Sbjct: 408 FLATAALDGV-KLWDLRKLRNFRTISPYDSDTPTNSVEFDFSGSYLAVGGSDTRVYQVAN 466
Query: 132 V---WDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
V W+ +KT L+G +V+ + D +A GS D LRI+
Sbjct: 467 VKLEWNLVKT--LPDLSG-TGKVTNVKFGTDAKYIAVGSMDRNLRIF 510
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 36/179 (20%), Positives = 77/179 (43%)
Query: 3 DHLDKSALLGS-PAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGH 61
D +++ + S P + ++S+ + P +G D +A L+D G T GH
Sbjct: 203 DAIERYTQISSHPLHKTNKPGILSMDIHPSKDIIATGGIDTNAVLFDRPSGQILCTLTGH 262
Query: 62 ESDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRL 120
I ++ F P F TGS D T +++ + +++ + + +V + +
Sbjct: 263 SKKITSLKFVPRDELFVTGSADKTVKIWQGSEEGNYNCIHTLKDHTAEVEAVTVHATQKY 322
Query: 121 LL-AGYDDFNC--NVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ A D+ C ++ + G +G + S DG+ + TG+ ++ ++IW+
Sbjct: 323 FVTASKDNTWCFYDIPSGSCLTQVGESSGQEGYTSA-SFHPDGLILGTGTTEAVVKIWD 380
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 43/154 (27%), Positives = 71/154 (46%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT V S+ L V+G+ S ++WD+ +T GH+++I ++ F P G
Sbjct: 60 TGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF 119
Query: 77 FATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
A+GS D +L+DIR + Y H + + FS G+ L + DD +WD
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQ---AVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWD 169
+ GH V+ + + +A+GS D
Sbjct: 177 TAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 43/160 (26%), Positives = 68/160 (42%)
Query: 19 HTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
H +V SL L R +G D LW I +C + GH S + +V
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 78 ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
GS + R++D+ A + L + H IC S+ F G + +G D N +WD
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANIC---SLDFHPYGEFVASGSQDTNIKLWDIR 135
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ GH V CL + DG +A+ + D +++W+
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD 175
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 177 (67.4 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 45/158 (28%), Positives = 69/158 (43%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
HT V +PD R VS + D + K+WD + C F N V F PNG A
Sbjct: 143 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIA 202
Query: 79 TGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+ D T +++DIR ++ L Y H G+ V+F SG L+ D + D ++
Sbjct: 203 SAGSDHTVKIWDIRVNKLLQHYQVHSG---GVNCVSFHPSGNYLITASSDGTLKILDLLE 259
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L GH V + ++ G +G D+ + +W
Sbjct: 260 GRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLW 297
Score = 164 (62.8 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 44/161 (27%), Positives = 73/161 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + S+ +P+ + +G+ D LW +R + + GH+ I +V F P G
Sbjct: 16 GHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGNLL 75
Query: 78 ATGSDDATCRLF--DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
A+ S D T RL+ D R +H + SV FS G+ L + +D + VW+
Sbjct: 76 ASASRDRTIRLWIPDKRGKSS-EFKAHT---APVRSVDFSADGQFLASASEDKSIKVWNM 131
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L H + V C + DG + + S D ++IW+
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Score = 155 (59.6 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 40/127 (31%), Positives = 60/127 (47%)
Query: 51 DGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY-SHDNIICGI 109
D ++ F GH++ I +V F PNG ATGS D L+ +R Y H ++I
Sbjct: 7 DPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVI--- 63
Query: 110 TSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWD 169
TSV FS G LL + D +W K ++ H V + + DG +A+ S D
Sbjct: 64 TSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASED 123
Query: 170 SFLRIWN 176
+++WN
Sbjct: 124 KSIKVWN 130
Score = 134 (52.2 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 35/161 (21%), Positives = 75/161 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT-FPGHESDINAVTFFPNGWA 76
GH + S+ +P S + D + +LW I D K + F H + + +V F +G
Sbjct: 58 GHKDVITSVQFSPLGNLLASASRDRTIRLW-IPDKRGKSSEFKAHTAPVRSVDFSADGQF 116
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
A+ S+D + +++++ + L ++Y H + + FS GRL+++ +D +WD+
Sbjct: 117 LASASEDKSIKVWNMYRQRFLYSLYRHTH---WVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + + + +G +A+ D ++IW+
Sbjct: 174 TNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWD 214
Score = 129 (50.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 31/117 (26%), Positives = 52/117 (44%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
S G ++ P+ S D + K+WDIR Q + H +N V+F P+G
Sbjct: 183 SDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNY 242
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
T S D T ++ D+ + +Y+ + +V+FS+ G L +G D +W
Sbjct: 243 LITASSDGTLKILDLLEGR--LIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLW 297
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 174 (66.3 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 45/161 (27%), Positives = 72/161 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH G ++ L + D + D S +WD G + H +N+ G
Sbjct: 103 GHKGTILELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPL 162
Query: 78 -ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+GSDD + R+FD R+ ++ H +TSV FS + L+ G D VWD
Sbjct: 163 VASGSDDRSARIFDTRSKGSTHLFQHKY---PVTSVCFSDASDQLITGGIDNVIRVWDIR 219
Query: 137 KTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
E LA H + ++ V++DG + + S D+ +IW+
Sbjct: 220 NQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWD 260
Score = 124 (48.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 48/168 (28%), Positives = 75/168 (44%)
Query: 19 HTGDVMSLSLAPDMRTFV-SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
H+G V S A V SG+ D SA+++D R F H+ + +V F
Sbjct: 146 HSGVVNSCCPARRGPPLVASGSDDRSARIFDTRSKGSTHLFQ-HKYPVTSVCFSDASDQL 204
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD--- 134
TG D R++DIR +QE +Y+ + ITS + S+ G LL+ D +C +WD
Sbjct: 205 ITGGIDNVIRVWDIR-NQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRP 263
Query: 135 ------SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++KT G + + + DG + GS D + IW+
Sbjct: 264 YAPPNRNIKTFN-GAQNNFEKNLIKSSWSIDGRRIGCGSSDRQVYIWD 310
Score = 108 (43.1 bits), Expect = 0.00048, P = 0.00048
Identities = 33/148 (22%), Positives = 63/148 (42%)
Query: 12 GSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK-QTFPGHESDINAVTF 70
GS H V S+ + ++G D ++WDIR+ T H+ I + +
Sbjct: 181 GSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSV 240
Query: 71 FPNGWAFATGSDDATCRLFDIRA----DQELAMYS--HDNIICGITSVAFSRSGRLLLAG 124
+G + S D +C+++DIR ++ + ++ +N + ++S GR + G
Sbjct: 241 SKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCG 300
Query: 125 YDDFNCNVWDSMKTERAGILAGHDNRVS 152
D +WD+ + L GH V+
Sbjct: 301 SSDRQVYIWDTNTKQLQYCLPGHSGTVN 328
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 177 (67.4 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 45/143 (31%), Positives = 72/143 (50%)
Query: 36 VSGACDASAKLWDIRDGSCKQT-FPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94
VS + D LWD + + T GH+ +N +F P+G AT S D++ RL+D +
Sbjct: 362 VSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTG 421
Query: 95 QELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSC 153
+ LA + H + + A+S RLL++ D VWD + L GH+++V
Sbjct: 422 KFLATLRGH---VAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFA 478
Query: 154 LGVTEDGMAVATGSWDSFLRIWN 176
+ + DG VA+G D +RIW+
Sbjct: 479 VDWSPDGQRVASGGADKAVRIWS 501
Score = 152 (58.6 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 48/168 (28%), Positives = 77/168 (45%)
Query: 17 SGHTGDVMSLSLAPDMRT-FVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW 75
+GH G ++S +P + V+G+ D +A+LWD + T GH + ++ V + P+
Sbjct: 131 NGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDAS 190
Query: 76 AFATGSDDATCRLFDIRADQEL--AMYSHDNII---CGITSVAFSRSGRLLLA-GYDDFN 129
ATGS D T R +D + + A+ H I C SG LLA G D
Sbjct: 191 IIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNT 250
Query: 130 CNVWDSMKTERAGILAGHDNRVSCLGVTEDGMA-VATGSWDSFLRIWN 176
+W+ L+GH ++C V G + + S+D +RIW+
Sbjct: 251 VRIWNVKLRTLLFTLSGHTAPITC--VRWGGQNWIYSSSYDKTIRIWD 296
Score = 141 (54.7 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 39/161 (24%), Positives = 70/161 (43%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
SGHT + + S + D + ++WD +DG C GH + +N ++
Sbjct: 266 SGHTAPITCVRWG-GQNWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEH-V 323
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+G+ D T F ++ + + + +SG L++ DD +WD
Sbjct: 324 LRSGAYDHTD--FKPKSFSDERRKAKERY-----EACLKQSGERLVSASDDLQLILWDPQ 376
Query: 137 K-TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K T+ + GH V+ + DG +AT S+DS +R+W+
Sbjct: 377 KSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWD 417
Score = 126 (49.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V + + D R VS + D + K+WD+R K PGHE + AV + P+G
Sbjct: 429 GHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRV 488
Query: 78 ATGSDDATCRLF 89
A+G D R++
Sbjct: 489 ASGGADKAVRIW 500
Score = 118 (46.6 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 30/91 (32%), Positives = 42/91 (46%)
Query: 88 LFDIRADQEL--AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA 145
+F +RA +M HD I + S S RL+ G DF +WD +
Sbjct: 117 VFRVRAVTRCTASMNGHDGTIIS-AQFSPSTSSRLV-TGSGDFTARLWDCDTQTPIATMK 174
Query: 146 GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
GH N VSC+ D +ATGS D+ +R W+
Sbjct: 175 GHTNWVSCVAWAPDASIIATGSMDNTIRFWD 205
Score = 112 (44.5 bits), Expect = 0.00025, P = 0.00025
Identities = 39/133 (29%), Positives = 58/133 (43%)
Query: 54 CKQTFPGHESDINAVTFFPNGWA-FATGSDDATCRLFDIRADQELA-MYSHDNIICGITS 111
C + GH+ I + F P+ + TGS D T RL+D +A M H N ++
Sbjct: 126 CTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTN---WVSC 182
Query: 112 VAFSRSGRLLLAGYDDFNCNVWDSMKTERAG-ILAGHDNRVS--C---LGVTEDG--MAV 163
VA++ ++ G D WD K G L H + C L + D +
Sbjct: 183 VAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLL 242
Query: 164 ATGSWDSFLRIWN 176
A+GS D+ +RIWN
Sbjct: 243 ASGSKDNTVRIWN 255
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 180 (68.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 47/159 (29%), Positives = 73/159 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH D+ S++++P+ + +G+ D AKLW D S F GH+ I V F P
Sbjct: 488 GHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQIL 547
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
AT S D T +L+ ++ L + HD + + F G LL+G D +W
Sbjct: 548 ATSSADGTLKLWGLQDFSCLKTFEGHD---ASVLKIIFVSRGTQLLSGGSDGLLKLWTIK 604
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
E L GH++++ L + V T S DS + +W
Sbjct: 605 TNECVKTLDGHEDKIWGLHTNKQDDMVVTASSDSSITLW 643
Score = 150 (57.9 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 42/161 (26%), Positives = 72/161 (44%)
Query: 22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG-HESDINAVTFFPNGWAFATG 80
D+ S L+PD V+G+ K W+ R+ C +T+ H + + + F ATG
Sbjct: 69 DITSFVLSPDDEVLVTGSRALLLKQWNWRENRCVRTWKAVHIAPVATMVFDSTSTLLATG 128
Query: 81 SDDATCRLFDIRADQELAMYSHDNI--ICGITS-VAFSRS-GRL-LLAGYDDFNCNVWDS 135
D+T +++D+ + Y N+ G+ V F RL L + D+ +WD
Sbjct: 129 GCDSTIKIWDM-----IKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDL 183
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
++ +L GH + V+ L T DG + + D +WN
Sbjct: 184 NSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWN 224
Score = 139 (54.0 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 42/170 (24%), Positives = 73/170 (42%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN--GWA 76
H V ++ +G CD++ K+WD+ C G ++ V F P+
Sbjct: 109 HIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQ 168
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW--- 133
+ S D R++D+ + + +A+ D +TS+AF+ G L++ D C VW
Sbjct: 169 LFSSSMDYKIRIWDLNSSKCVAVL--DGHFSAVTSLAFTADGNTLISSGRDKICMVWNLK 226
Query: 134 --DSMKT----E--RAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+S++T E A +L S LGV + G+ T L++W
Sbjct: 227 TRESIRTIPIYESVEAAVLLPEQGDFSQLGVKKQGLHFLTAGSKGVLKVW 276
Score = 133 (51.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/145 (21%), Positives = 71/145 (48%)
Query: 9 ALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAV 68
+LLG +GH + + +P + + + D + KLW ++D SC +TF GH++ + +
Sbjct: 523 SLLG--VFTGHKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKI 580
Query: 69 TFFPNGWAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDD 127
F G +G D +L+ I+ ++ + + H++ I G+ + ++ +++ D
Sbjct: 581 IFVSRGTQLLSGGSDGLLKLWTIKTNECVKTLDGHEDKIWGLHT---NKQDDMVVTASSD 637
Query: 128 FNCNVW-DSMKTERAGILAGHDNRV 151
+ +W D + E+ A + ++
Sbjct: 638 SSITLWKDVTEIEQEEAQAKREEQI 662
Score = 117 (46.2 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 34/122 (27%), Positives = 50/122 (40%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVA 113
+ T GH+ DIN+V PN ATGS D +L+ L +++ H GI V
Sbjct: 483 QMTERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKR---GIWCVQ 539
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
FS ++L D +W GHD V + G + +G D L+
Sbjct: 540 FSPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLK 599
Query: 174 IW 175
+W
Sbjct: 600 LW 601
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 175 (66.7 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 44/162 (27%), Positives = 75/162 (46%)
Query: 15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
A SGH V + P VS + DA+ K+WD G ++T GH + ++F G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTG 162
Query: 75 WAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A+ S D T +L+D + + + M+ HD+ ++SVA +G +++ D +W
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDH---NVSSVAIMPNGDHIVSASRDKTMKMW 219
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ GH V + +DG +A+ S D +R+W
Sbjct: 220 EVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVW 261
Score = 148 (57.2 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 33/122 (27%), Positives = 59/122 (48%)
Query: 55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA-DQELAMYSHDNIICGITSVA 113
K GH S + V F P + S+DAT +++D A D E + H + + ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTD---SVQDIS 157
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
F ++G+LL + D +WD E + GHD+ VS + + +G + + S D ++
Sbjct: 158 FDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMK 217
Query: 174 IW 175
+W
Sbjct: 218 MW 219
Score = 144 (55.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 39/155 (25%), Positives = 70/155 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V +S + S + D + KLWD + C +T GH+ ++++V PNG
Sbjct: 148 GHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 78 ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ S D T +++++ + ++ H + V ++ G LL + +D VW
Sbjct: 208 VSASRDKTMKMWEVATGYCVKTFTGHRE---WVRMVRPNQDGTLLASCSNDQTVRVWVVA 264
Query: 137 KTERAGILAGHDNRVSCLGVTEDG----MAVATGS 167
E L H++ V C+ + ++ ATGS
Sbjct: 265 TKECKAELREHEHVVECISWAPESAHPTISEATGS 299
Score = 142 (55.0 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 36/122 (29%), Positives = 59/122 (48%)
Query: 14 PAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN 73
P S TG S P +SG+ D + K+WDI G C T GH++ + V F P
Sbjct: 291 PTISEATGSENKKSGKPGP-FLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPG 349
Query: 74 GWAFATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNV 132
G + +DD T R++D + + + S H++ + TS+ F ++ ++ G D V
Sbjct: 350 GRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFV---TSLDFHKASPYVVTGSVDQTVKV 406
Query: 133 WD 134
W+
Sbjct: 407 WE 408
Score = 114 (45.2 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 29/98 (29%), Positives = 47/98 (47%)
Query: 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+GS D T +++DI L + HDN + G V F GR +++ DD +WD
Sbjct: 313 SGSRDKTIKMWDISTGMCLMTLVGHDNWVRG---VLFHPGGRFVVSCADDKTLRIWDYKN 369
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L+ H++ V+ L + V TGS D +++W
Sbjct: 370 KRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
Score = 52 (23.4 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 16/71 (22%), Positives = 30/71 (42%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW- 75
+GH V + D S + D + ++W + CK HE + +++ P
Sbjct: 231 TGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAH 290
Query: 76 ---AFATGSDD 83
+ ATGS++
Sbjct: 291 PTISEATGSEN 301
>UNIPROTKB|E1BRZ6 [details] [associations]
symbol:TWF2 "Twinfilin-2" species:9031 "Gallus gallus"
[GO:0003779 "actin binding" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IEA] [GO:0048188 "Set1C/COMPASS complex" evidence=IEA]
[GO:0072357 "PTW/PP1 phosphatase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR002108
InterPro:IPR015943 Pfam:PF00241 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS51263 SMART:SM00102 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000785 GO:GO:0042800 GO:GO:0048188
GO:GO:0072357 GeneTree:ENSGT00530000063965 EMBL:AADN02056441
EMBL:AADN02056442 EMBL:AADN02056443 EMBL:AADN02056444
EMBL:AADN02056445 EMBL:AADN02056446 EMBL:AADN02056447
IPI:IPI00577651 ProteinModelPortal:E1BRZ6
Ensembl:ENSGALT00000006337 ArrayExpress:E1BRZ6 Uniprot:E1BRZ6
Length = 601
Score = 178 (67.7 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 48/167 (28%), Positives = 81/167 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GHT V++LS++P TF+SG+ D + +LWD+R +C+ H +F P G F
Sbjct: 105 GHTKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLM--HLQGKPVCSFDPEGLIF 162
Query: 78 ATGSDDATCRLFDIRA-DQE--LAMYS--HDNIICGITSVAFSRSGRLLLAGYDDFNCNV 132
A G + +L+D+R+ D++ A + +D C T + FS G+L+L + +
Sbjct: 163 AAGVNSEMVKLYDLRSFDKKGPFATFKMQYDRT-CEWTGLKFSNDGKLILISTNGGFIRL 221
Query: 133 WDSMKTERAGILAGHDNRVSCL---GVTEDGMAVATGSWDSFLRIWN 176
D+ K G++N + T D + GS D + +WN
Sbjct: 222 IDAFKGAVLHTFGGYNNSKAVTLEASFTPDSQFIMIGSEDGKIHVWN 268
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 176 (67.0 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 44/161 (27%), Positives = 77/161 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V ++ P VS + D + +LWD+ G GH I ++ P+G
Sbjct: 263 GHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLV 322
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
++G +DA R++D+R+ + + + D I I ++A+S +G L D +WD K
Sbjct: 323 SSGGNDAIGRIWDLRSGKSIMVL--DEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRK 380
Query: 138 TERAGILAGHDNRVSCLGVTEDGMA--VATGSWDSFLRIWN 176
A + H + VS + E G+ +AT +D +++WN
Sbjct: 381 VSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWN 421
Score = 173 (66.0 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 41/161 (25%), Positives = 77/161 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ + S++ PD SG DA ++WD+R G H I A+ + PNG+
Sbjct: 305 GHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQL 364
Query: 78 ATGSDDATCRLFDIRADQELA--MYSHDNIICGITSVAFSRSGRLLLAGYDDFNC-NVWD 134
AT S D T +++D+R LA + +H +++ + + + + +GYD C +W+
Sbjct: 365 ATSSADDTVKIWDLRK-VSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYD--GCVKLWN 421
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ + GH+ +V + V G + +D +++W
Sbjct: 422 PLNCSLIKSMVGHEEKV--MSVDGYGDRFISSGYDRTIKLW 460
Score = 162 (62.1 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 47/169 (27%), Positives = 73/169 (43%)
Query: 18 GHTGDVMSLSLAP---------DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAV 68
GHT V L P + T +GA D + LW + GH + + V
Sbjct: 212 GHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRV 271
Query: 69 TFFPNGWAFATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDD 127
F P+G + S D T RL+D+ EL M H GI S+A G L+ +G +D
Sbjct: 272 AFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSE---GIFSIACQPDGSLVSSGGND 328
Query: 128 FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+WD + +L H ++ + + +G +AT S D ++IW+
Sbjct: 329 AIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWD 377
Score = 147 (56.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 46/183 (25%), Positives = 79/183 (43%)
Query: 3 DHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHE 62
+HL K+ L+GS G + + + + F SG+ K+W+ + S Q F GH
Sbjct: 157 EHLQKAELMGSQI--GGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHT 214
Query: 63 SDINAVTFFP--NGW-------AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVA 113
++ + ++P W ATG+ D T L+ +A Q + + + + VA
Sbjct: 215 DRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLW--KASQSTPLLRLEGHLARVGRVA 272
Query: 114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
F SG L++ D +WD + GH + + DG V++G D+ R
Sbjct: 273 FHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGR 332
Query: 174 IWN 176
IW+
Sbjct: 333 IWD 335
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 173 (66.0 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 43/158 (27%), Positives = 70/158 (44%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
HT V +PD R VS + D + K+WD + C F N V F P+G A
Sbjct: 13 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIA 72
Query: 79 TGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+ D T +++D+R ++ L Y H G+ ++F SG L+ D + D ++
Sbjct: 73 SAGSDQTVKVWDVRVNKLLQHYQVHSG---GVNCISFHPSGNYLITASSDGTLKILDLLE 129
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L GH V + ++ G A+G D+ + +W
Sbjct: 130 GRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 167
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 176 (67.0 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 44/157 (28%), Positives = 70/157 (44%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
HT V +PD R VS + D + K+WD + C F N V F PNG A
Sbjct: 143 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIA 202
Query: 79 TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT 138
+ D +++DIR ++ L Y + CG+ ++F G L+ D + D ++
Sbjct: 203 SAGSDHAVKIWDIRMNKLLQHYQVHS--CGVNCLSFHPLGNSLVTASSDGTVKMLDLIEG 260
Query: 139 ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L GH V + ++DG + +G D+ + IW
Sbjct: 261 RLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 166 (63.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 40/160 (25%), Positives = 72/160 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + S +P+ + + + D LW ++ + + GH+ + ++ F P G
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLL 75
Query: 78 ATGSDDATCRLFDI-RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+ S D T RL+ + R + +H + SV FS G+LL+ +D + VW
Sbjct: 76 ASASRDRTVRLWVLDRKGKSSEFKAHT---APVRSVDFSADGQLLVTASEDKSIKVWSMF 132
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L H + V C + DG + + S D ++IW+
Sbjct: 133 RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Score = 143 (55.4 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 36/161 (22%), Positives = 73/161 (45%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDI-RDGSCKQTFPGHESDINAVTFFPNGWA 76
GH V SL +P S + D + +LW + R G + F H + + +V F +G
Sbjct: 58 GHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSE-FKAHTAPVRSVDFSADGQL 116
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
T S+D + +++ + + L ++Y H + + FS GRL+++ +D +WD+
Sbjct: 117 LVTASEDKSIKVWSMFRQRFLYSLYRHTH---WVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + + + +G +A+ D ++IW+
Sbjct: 174 TNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWD 214
Score = 127 (49.8 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 32/129 (24%), Positives = 58/129 (44%)
Query: 49 IRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY-SHDNIIC 107
+ D +++F GH++ I + F PN AT S D L+ ++ Y H +++
Sbjct: 5 LEDPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVV- 63
Query: 108 GITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGS 167
TS+ FS G LL + D +W + ++ H V + + DG + T S
Sbjct: 64 --TSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTAS 121
Query: 168 WDSFLRIWN 176
D +++W+
Sbjct: 122 EDKSIKVWS 130
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 176 (67.0 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 44/165 (26%), Positives = 75/165 (45%)
Query: 13 SPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP 72
S SGH G V +++ P F +GA D K+WD+ G K + GH S + V
Sbjct: 165 SRVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVST 224
Query: 73 -NGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN 131
+ + F+ G +D + +D+ ++ + Y H ++ + S+A + +L D
Sbjct: 225 KHPYLFSCG-EDRQVKCWDLEYNKVIRHY-HGHL-SAVYSLALHPTIDVLATSGRDSTAR 281
Query: 132 VWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+WD L GH N V+ + + TGS DS +R+W+
Sbjct: 282 IWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWD 326
Score = 153 (58.9 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 39/160 (24%), Positives = 75/160 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V SL+L P + + D++A++WD+R + T GH + + +V
Sbjct: 254 GHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQI 313
Query: 78 ATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
TGS D+T RL+D+ A + + + +H + S+ S + + D N W
Sbjct: 314 ITGSHDSTVRLWDLAAGKSVCTLTNHKK---SVRSIVLHPSLYMFASASPD-NIKQWRCP 369
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + ++GH + V+C+ +G+ V+ G + + W+
Sbjct: 370 EGKFVQNISGHTSIVNCMAANSEGVLVSGGD-NGTMFFWD 408
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 176 (67.0 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 47/142 (33%), Positives = 69/142 (48%)
Query: 36 VSGACDASAKLWD-IRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94
VSG+ D + LW D GH++ IN V F P+ A+ S D + +L+D R
Sbjct: 347 VSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTG 406
Query: 95 QELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSC 153
+ LA + H + + +A+S RLL++G D VWD + L GH + V
Sbjct: 407 KYLASLRGH---VAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYA 463
Query: 154 LGVTEDGMAVATGSWDSFLRIW 175
+ + DG VA+G D LRIW
Sbjct: 464 VDWSPDGQRVASGGKDKCLRIW 485
Score = 154 (59.3 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 39/162 (24%), Positives = 77/162 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V+S++ +P + SG+ D + + WD+ + T GH + ++++ P+G
Sbjct: 114 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKL 173
Query: 78 ATGSDDATCRLFDIRADQELA--MYSHDNIICGIT--SVAFSRSGRLLLAGYDDFNCNVW 133
A+G + L+D ++ + H I G++ + + R + + D + VW
Sbjct: 174 ASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVW 233
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
D+ IL GH V+CL DG+ + + S D +++W
Sbjct: 234 DTTAGRCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 274
Score = 126 (49.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V ++ + D R VSG+ D++ K+WD++ PGH ++ AV + P+G
Sbjct: 414 GHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRV 473
Query: 78 ATGSDDATCRLF 89
A+G D R++
Sbjct: 474 ASGGKDKCLRIW 485
Score = 121 (47.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 45/161 (27%), Positives = 71/161 (44%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + M+LS +RT +A+ D++ GS K+ S N V
Sbjct: 289 GHWVNTMALSTDYALRTGAFEPAEATVNAQDLQ-GSLKELKERASSRYNLVRG-QGPERL 346
Query: 78 ATGSDDATCRLFDIRADQE-LA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
+GSDD T L+ D++ LA M H +I V FS R++ + D + +WD
Sbjct: 347 VSGSDDFTLFLWSPAEDKKPLARMTGHQALI---NQVLFSPDSRIVASASFDKSIKLWDG 403
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L GH V + + D + +GS DS L++W+
Sbjct: 404 RTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWD 444
Score = 120 (47.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/130 (26%), Positives = 59/130 (45%)
Query: 54 CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSV 112
C + GH + +V F P G A+GS D T R +D+ + H + + S+
Sbjct: 108 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRH---WVLSI 164
Query: 113 AFSRSGRLLLAGYDDFNCNVWD-SMKTERAGILAGHDNRVSCLG-----VTEDGMAVATG 166
++S G+ L +G + +WD S T+ L GH ++ L + + VA+
Sbjct: 165 SWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASS 224
Query: 167 SWDSFLRIWN 176
S D +R+W+
Sbjct: 225 SKDGSVRVWD 234
Score = 118 (46.6 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 41/167 (24%), Positives = 76/167 (45%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GHT V L D + S + D + K+W DG +T GH +N + + +A
Sbjct: 245 TGHTQSVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD-YA 302
Query: 77 FATGS---DDATCRLFDIRAD-QELA--MYSHDNIICGITSVAFSRSGRLLLAGYDDFNC 130
TG+ +AT D++ +EL S N++ G + L++G DDF
Sbjct: 303 LRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRG-------QGPERLVSGSDDFTL 355
Query: 131 NVWDSMKTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+W + ++ + GH ++ + + D VA+ S+D +++W+
Sbjct: 356 FLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWD 402
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 172 (65.6 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 39/158 (24%), Positives = 77/158 (48%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V + ++ D + +SG+ D + +LWDI G + F GH D+ +V F +
Sbjct: 68 GHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQI 127
Query: 78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+GS DAT ++++ + + + + ++ + FS + +++G D +WD
Sbjct: 128 ISGSRDATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKS 187
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ L H V+ + ++ DG A+G D+F +W
Sbjct: 188 FKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLW 225
Score = 171 (65.3 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 47/170 (27%), Positives = 82/170 (48%)
Query: 18 GHTGDVMSLSLAPDMR-TFVSGACDASAKLWDIRD------GSCKQTFPGHESDINAVTF 70
GH G V S++++P+ T +S + D + +W + G ++ GH + V
Sbjct: 19 GHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVI 78
Query: 71 FPNGWAFATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFN 129
+G +GS D T RL+DI ++ H + SVAFS R +++G D
Sbjct: 79 SHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQ---DVMSVAFSSDNRQIISGSRDAT 135
Query: 130 CNVWDSMKTERAGILAG---HDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
VW+++ E L G H + VSC+ + + + +GSWD+ ++IW+
Sbjct: 136 IKVWNTLG-ECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWD 184
Score = 144 (55.7 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 39/124 (31%), Positives = 57/124 (45%)
Query: 11 LGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTF 70
L P A H V + +P+ T VSG+ D K+WDI+ C T H +N VT
Sbjct: 149 LEGPEA--HQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTI 206
Query: 71 FPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNC 130
P+G A+G D L+++ + + L N I ++AFS + L A DD
Sbjct: 207 SPDGSLCASGGKDTFACLWELSSGKPLYKLEARNTI---NALAFSPNKYWLSAATDD-KI 262
Query: 131 NVWD 134
+WD
Sbjct: 263 IIWD 266
>UNIPROTKB|E2RGF2 [details] [associations]
symbol:WDR82 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0072357 "PTW/PP1 phosphatase complex"
evidence=IEA] [GO:0048188 "Set1C/COMPASS complex" evidence=IEA]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000785 "chromatin" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000785 GO:GO:0042800 GO:GO:0048188 KO:K14962
GO:GO:0072357 GeneTree:ENSGT00530000063965 CTD:80335 OMA:CTNMAFW
EMBL:AAEX03012197 RefSeq:XP_859624.1 ProteinModelPortal:E2RGF2
SMR:E2RGF2 Ensembl:ENSCAFT00000015643 GeneID:484740 KEGG:cfa:484740
NextBio:20858819 Uniprot:E2RGF2
Length = 313
Score = 171 (65.3 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 47/166 (28%), Positives = 79/166 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V++LS++P TF+SG+ D + +LWD+R +C+ H +F P G F
Sbjct: 105 GHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLM--HLQGKPVCSFDPEGLIF 162
Query: 78 ATGSDDATCRLFDIRA-DQ-ELAMYS--HDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A G + +L+D+R+ D+ A + +D C T + FS G+L+L + +
Sbjct: 163 AAGVNSEMVKLYDLRSFDKGPFATFKMQYDRT-CEWTGLKFSNDGKLILISTNGSFIRLI 221
Query: 134 DSMKTERAGILAGHDNRVSCL---GVTEDGMAVATGSWDSFLRIWN 176
D+ K G+ N + T D + GS D + +WN
Sbjct: 222 DAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWN 267
>UNIPROTKB|Q6UXN9 [details] [associations]
symbol:WDR82 "WD repeat-containing protein 82" species:9606
"Homo sapiens" [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0072357 "PTW/PP1 phosphatase complex"
evidence=IDA] [GO:0035097 "histone methyltransferase complex"
evidence=IDA] [GO:0051568 "histone H3-K4 methylation" evidence=IDA]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471055 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000785 GO:GO:0048188 GO:GO:0051568 KO:K14962
GO:GO:0072357 HOGENOM:HOG000176477 OrthoDB:EOG4TTGJJ CTD:80335
HOVERGEN:HBG089149 EMBL:AY358264 EMBL:AK074290 EMBL:AK291380
IPI:IPI00152695 RefSeq:NP_079498.2 UniGene:Hs.194110
ProteinModelPortal:Q6UXN9 SMR:Q6UXN9 IntAct:Q6UXN9 STRING:Q6UXN9
PhosphoSite:Q6UXN9 DMDM:74758580 PaxDb:Q6UXN9 PeptideAtlas:Q6UXN9
PRIDE:Q6UXN9 Ensembl:ENST00000296490 GeneID:80335 KEGG:hsa:80335
UCSC:uc003ddk.2 GeneCards:GC03M052265 HGNC:HGNC:28826 MIM:611059
neXtProt:NX_Q6UXN9 PharmGKB:PA142670585 InParanoid:Q6UXN9
OMA:CTNMAFW ChiTaRS:WDR82 GenomeRNAi:80335 NextBio:70900
ArrayExpress:Q6UXN9 Bgee:Q6UXN9 CleanEx:HS_WDR82
Genevestigator:Q6UXN9 Uniprot:Q6UXN9
Length = 313
Score = 171 (65.3 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 47/166 (28%), Positives = 79/166 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V++LS++P TF+SG+ D + +LWD+R +C+ H +F P G F
Sbjct: 105 GHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLM--HLQGKPVCSFDPEGLIF 162
Query: 78 ATGSDDATCRLFDIRA-DQ-ELAMYS--HDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A G + +L+D+R+ D+ A + +D C T + FS G+L+L + +
Sbjct: 163 AAGVNSEMVKLYDLRSFDKGPFATFKMQYDRT-CEWTGLKFSNDGKLILISTNGSFIRLI 221
Query: 134 DSMKTERAGILAGHDNRVSCL---GVTEDGMAVATGSWDSFLRIWN 176
D+ K G+ N + T D + GS D + +WN
Sbjct: 222 DAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWN 267
>UNIPROTKB|F2Z5U3 [details] [associations]
symbol:WDR82 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072357 "PTW/PP1 phosphatase complex" evidence=IEA]
[GO:0048188 "Set1C/COMPASS complex" evidence=IEA] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000785
GO:GO:0042800 GO:GO:0048188 KO:K14962 GO:GO:0072357
GeneTree:ENSGT00530000063965 OMA:CTNMAFW EMBL:CU915558
RefSeq:XP_003132297.1 UniGene:Ssc.1045 UniGene:Ssc.53788
ProteinModelPortal:F2Z5U3 SMR:F2Z5U3 Ensembl:ENSSSCT00000012513
GeneID:100522703 KEGG:ssc:100522703 CTD:728505 Uniprot:F2Z5U3
Length = 313
Score = 171 (65.3 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 47/166 (28%), Positives = 79/166 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V++LS++P TF+SG+ D + +LWD+R +C+ H +F P G F
Sbjct: 105 GHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLM--HLQGKPVCSFDPEGLIF 162
Query: 78 ATGSDDATCRLFDIRA-DQ-ELAMYS--HDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A G + +L+D+R+ D+ A + +D C T + FS G+L+L + +
Sbjct: 163 AAGVNSEMVKLYDLRSFDKGPFATFKMQYDRT-CEWTGLKFSNDGKLILISTNGSFIRLI 221
Query: 134 DSMKTERAGILAGHDNRVSCL---GVTEDGMAVATGSWDSFLRIWN 176
D+ K G+ N + T D + GS D + +WN
Sbjct: 222 DAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWN 267
>MGI|MGI:1924555 [details] [associations]
symbol:Wdr82 "WD repeat domain containing 82" species:10090
"Mus musculus" [GO:0000785 "chromatin" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0035097 "histone methyltransferase complex"
evidence=ISO] [GO:0048188 "Set1C/COMPASS complex" evidence=ISO]
[GO:0051568 "histone H3-K4 methylation" evidence=ISO;IMP]
[GO:0072357 "PTW/PP1 phosphatase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924555 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000785 GO:GO:0003682
GO:GO:0042800 GO:GO:0048188 GO:GO:0051568 KO:K14962 GO:GO:0072357
HOGENOM:HOG000176477 GeneTree:ENSGT00530000063965 OrthoDB:EOG4TTGJJ
CTD:80335 HOVERGEN:HBG089149 OMA:CTNMAFW ChiTaRS:WDR82
EMBL:AK035109 EMBL:AK037620 EMBL:AK149692 EMBL:EF011615
EMBL:BC019115 EMBL:BC031502 IPI:IPI00221414 RefSeq:NP_084172.1
UniGene:Mm.265125 ProteinModelPortal:Q8BFQ4 SMR:Q8BFQ4
IntAct:Q8BFQ4 STRING:Q8BFQ4 PhosphoSite:Q8BFQ4
REPRODUCTION-2DPAGE:Q8BFQ4 PaxDb:Q8BFQ4 PRIDE:Q8BFQ4
Ensembl:ENSMUST00000020490 GeneID:77305 KEGG:mmu:77305
InParanoid:Q8BFQ4 NextBio:346735 Bgee:Q8BFQ4 CleanEx:MM_WDR82
Genevestigator:Q8BFQ4 Uniprot:Q8BFQ4
Length = 313
Score = 171 (65.3 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 47/166 (28%), Positives = 79/166 (47%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH+ V++LS++P TF+SG+ D + +LWD+R +C+ H +F P G F
Sbjct: 105 GHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLM--HLQGKPVCSFDPEGLIF 162
Query: 78 ATGSDDATCRLFDIRA-DQ-ELAMYS--HDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
A G + +L+D+R+ D+ A + +D C T + FS G+L+L + +
Sbjct: 163 AAGVNSEMVKLYDLRSFDKGPFATFKMQYDRT-CEWTGLKFSNDGKLILISTNGSFIRLI 221
Query: 134 DSMKTERAGILAGHDNRVSCL---GVTEDGMAVATGSWDSFLRIWN 176
D+ K G+ N + T D + GS D + +WN
Sbjct: 222 DAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWN 267
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 174 (66.3 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 41/160 (25%), Positives = 74/160 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH V S+ + + + SG+ D+ +W ++ + F GH+ + V F P+G
Sbjct: 17 GHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 78 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A+GS D T R++ E ++ +H + SV F G+ + DD VW +
Sbjct: 77 ASGSRDKTVRIWVPNVKGESTVFRAHT---ATVRSVHFCSDGQSFVTASDDKTVKVWSTH 133
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + L+ H N V C + DG + + S D +++W+
Sbjct: 134 RQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Score = 167 (63.8 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 41/159 (25%), Positives = 67/159 (42%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
S H V +PD R VS + D + KLWD C ++ H + V F P+G
Sbjct: 142 SQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTC 201
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
A D T +++D+R + L Y + + +++F SG L+ D + D M
Sbjct: 202 IAAAGMDNTVKVWDVRTHRLLQHYQLHS--AAVNALSFHPSGNYLVTASSDSTLKILDLM 259
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
+ L GH + + + G A+G D + +W
Sbjct: 260 EGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 162 (62.1 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 38/160 (23%), Positives = 69/160 (43%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
+GH V ++ +P SG+ D + ++W F H + + +V F +G +
Sbjct: 58 AGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQS 117
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
F T SDD T +++ + L +S I + FS GRL+++ DD +WD
Sbjct: 118 FVTASDDKTVKVWSTHRQKFL--FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
E H V+ + G +A D+ +++W+
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD 215
Score = 150 (57.9 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 35/118 (29%), Positives = 56/118 (47%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
H G V + P + D + K+WD+R Q + H + +NA++F P+G
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 245
Query: 79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
T S D+T ++ D+ + L ++ H T+VAFSR+G +G D VW S
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQG---PATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 123 (48.4 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 34/128 (26%), Positives = 59/128 (46%)
Query: 51 DGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS-HDNIICGI 109
D S ++ F GH + +V F N A+GS D+ ++ ++ ++ H + +
Sbjct: 8 DPSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKD---AV 64
Query: 110 TSVAFSRSGRLLLAGYDDFNCNVW-DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW 168
T V FS SG LL +G D +W ++K E + H V + DG + T S
Sbjct: 65 TCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVHFCSDGQSFVTASD 123
Query: 169 DSFLRIWN 176
D +++W+
Sbjct: 124 DKTVKVWS 131
>TAIR|locus:2051094 [details] [associations]
symbol:MAC3B "MOS4-associated complex 3B" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0042742
"defense response to bacterium" evidence=IGI] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005618
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0003677
GO:GO:0042742 GO:GO:0006281 eggNOG:COG2319 GO:GO:0006397
GO:GO:0045087 GO:GO:0005681 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AC002332 GO:GO:0080008 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
ProtClustDB:CLSN2687671 EMBL:FJ820118 EMBL:AY080868 IPI:IPI00529157
PIR:C84744 RefSeq:NP_850206.4 RefSeq:NP_850207.4 UniGene:At.44022
ProteinModelPortal:O22785 SMR:O22785 IntAct:O22785 STRING:O22785
PaxDb:O22785 PRIDE:O22785 EnsemblPlants:AT2G33340.1
EnsemblPlants:AT2G33340.2 GeneID:817897 KEGG:ath:AT2G33340
GeneFarm:2867 TAIR:At2g33340 InParanoid:O22785 OMA:QWQELKV
PhylomeDB:O22785 Genevestigator:O22785 Uniprot:O22785
Length = 525
Score = 176 (67.0 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 43/163 (26%), Positives = 74/163 (45%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLW-DIRDGS--CKQTFPGHESDINAVTFFPN 73
+GH+ V S+ D ++ + D + ++W + DG+ C T H +++ AVT P
Sbjct: 261 TGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPT 320
Query: 74 GWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
F + S D T +D+ + LA S D+ T+ AF G +L G +W
Sbjct: 321 NKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIW 380
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
D GH V+ + +E+G +AT + D +R+W+
Sbjct: 381 DVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDG-VRLWD 422
Score = 144 (55.7 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 46/176 (26%), Positives = 74/176 (42%)
Query: 5 LDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD 64
L + L + D + + PD +G + K+WD++ + F GH +
Sbjct: 338 LSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGE 397
Query: 65 INAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAG 124
+ A++F NG+ AT ++D RL+D+R + + + SV F SG L
Sbjct: 398 VTAISFSENGYFLATAAEDGV-RLWDLRKLRNFKSF----LSADANSVEFDPSGSYLGIA 452
Query: 125 YDDFNCNVWDSMKTERAGI-----LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
D S+K E I L+G + +C+ D VA GS D LRI+
Sbjct: 453 ASDIKVYQTASVKAEWNLIKTLPDLSG-TGKATCVKFGSDAQYVAVGSMDRNLRIF 507
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 172 (65.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 44/160 (27%), Positives = 74/160 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH ++ L D VS + D + + WD+ G + H S +N+ G
Sbjct: 94 GHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPL 153
Query: 78 A-TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+GSDD T +L+D+R + + D IT+V+FS + + G D + VWD
Sbjct: 154 IISGSDDGTAKLWDMRQRGAIQTFP-DKY--QITAVSFSDAADKIFTGGVDNDVKVWDLR 210
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
K E L GH + ++ + ++ DG + T D+ L +W+
Sbjct: 211 KGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWD 250
Score = 151 (58.2 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 48/152 (31%), Positives = 71/152 (46%)
Query: 36 VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR-AD 94
+SG+ D +AKLWD+R QTFP + I AV+F TG D +++D+R +
Sbjct: 155 ISGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGE 213
Query: 95 QELAMYSHDNIICGITSVAFSRSGRLLLA-GYDDFNCNVWD----SMKTERAGILAGHD- 148
+ + H + I G++ S G LL G D+ C VWD + + I GH
Sbjct: 214 ATMTLEGHQDTITGMS---LSPDGSYLLTNGMDNKLC-VWDMRPYAPQNRCVKIFEGHQH 269
Query: 149 ----NRVSCLGVTEDGMAVATGSWDSFLRIWN 176
N + C + DG V GS D + IW+
Sbjct: 270 NFEKNLLKC-SWSPDGTKVTAGSSDRMVHIWD 300
Score = 141 (54.7 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 41/165 (24%), Positives = 77/165 (46%)
Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ--TFPGHESDINAVTFFPNG 74
SGH V ++ P SG+ D LW + G CK GH++ I + + +G
Sbjct: 50 SGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVH-GDCKNFMVLKGHKNAILDLHWTSDG 108
Query: 75 WAFATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNV 132
+ S D T R +D+ +++ M H + + S +R G L+++G DD +
Sbjct: 109 SQIVSASPDKTVRAWDVETGKQIKKMAEHSSFV---NSCCPTRRGPPLIISGSDDGTAKL 165
Query: 133 WDSMKTERAGILAGHDN-RVSCLGVTEDGMAVATGSWDSFLRIWN 176
WD M+ +R I D +++ + ++ + TG D+ +++W+
Sbjct: 166 WD-MR-QRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWD 208
Score = 128 (50.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 39/139 (28%), Positives = 62/139 (44%)
Query: 24 MSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WAFATGSD 82
+S S A D + F G D K+WD+R G T GH+ I ++ P+G + G D
Sbjct: 186 VSFSDAAD-KIFTGGV-DNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMD 243
Query: 83 DATCRLFDIR--ADQELAMY---SHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
+ C ++D+R A Q + H N + ++S G + AG D ++WD+
Sbjct: 244 NKLC-VWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTT 302
Query: 137 KTERAGILAGHDNRVS-CL 154
L GH V+ C+
Sbjct: 303 SRRTIYKLPGHTGSVNECV 321
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 175 (66.7 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 44/158 (27%), Positives = 70/158 (44%)
Query: 19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
HT V +PD R VS + D + K+WD + C F N V F PNG A
Sbjct: 143 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIA 202
Query: 79 TGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
+ D T +++DIR ++ L Y H G+ V+F SG ++ D + D ++
Sbjct: 203 SAGSDHTVKIWDIRVNKLLQHYQVHSG---GVNCVSFHPSGNYIITASSDGTLKILDLLE 259
Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
L GH V + ++ G ++G D+ + +W
Sbjct: 260 GRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLW 297
Score = 150 (57.9 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 41/161 (25%), Positives = 70/161 (43%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
GH + S+ +P + + + D LW+ + + + GH+ + +V F P G
Sbjct: 16 GHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLL 75
Query: 78 ATGSDDATCRLF--DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
A+ S D T RL+ D R +H + SV FS G+ L +D + VW+
Sbjct: 76 ASASRDRTVRLWIPDKRGKSS-EFKAHT---APVRSVDFSADGQFLATASEDKSIKVWNM 131
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ L H + V C + DG + + S D ++IW+
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Score = 142 (55.0 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 37/127 (29%), Positives = 59/127 (46%)
Query: 51 DGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY-SHDNIICGI 109
D ++ F GH++ I +V F P+G AT S D L++ + Y H +++
Sbjct: 7 DPVLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVV--- 63
Query: 110 TSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWD 169
TSV FS G LL + D +W K ++ H V + + DG +AT S D
Sbjct: 64 TSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASED 123
Query: 170 SFLRIWN 176
+++WN
Sbjct: 124 KSIKVWN 130
Score = 139 (54.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 37/161 (22%), Positives = 75/161 (46%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT-FPGHESDINAVTFFPNGWA 76
GH V S+ +P S + D + +LW I D K + F H + + +V F +G
Sbjct: 58 GHKDVVTSVQFSPLGNLLASASRDRTVRLW-IPDKRGKSSEFKAHTAPVRSVDFSADGQF 116
Query: 77 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
AT S+D + +++++ + L ++Y H + + FS GRL+++ +D +WD+
Sbjct: 117 LATASEDKSIKVWNMYRQRFLYSLYRHTH---WVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
+ + + + +G +A+ D ++IW+
Sbjct: 174 TNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWD 214
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 175 (66.7 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 46/161 (28%), Positives = 80/161 (49%)
Query: 18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP-NGWA 76
GH G V S++ P F +G+ D + K+WD+ G K T GH + + + +
Sbjct: 168 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYM 227
Query: 77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
F+ G DD + +D+ ++ + Y H ++ G+ +A + ++L G D C VWD +
Sbjct: 228 FSAG-DDKQVKCWDLEQNKVIRSY-HGHLH-GVYCLALHPTLDVVLTGGRDSVCRVWD-I 283
Query: 137 KTERAGILAGHDNRV-SCLGVTEDGMAVATGSWDSFLRIWN 176
+T+ + HD+ V S L D + TGS DS ++ W+
Sbjct: 284 RTKMQIFVLPHDSDVFSVLARPTDPQVI-TGSHDSTIKFWD 323
Score = 133 (51.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 32/141 (22%), Positives = 60/141 (42%)
Query: 17 SGHTGDVMSLSLAPDMRTFV-SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW 75
+GH G V L+++ + T++ S D K WD+ +++ GH + + P
Sbjct: 209 TGHIGQVRGLAVS-NRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLD 267
Query: 76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
TG D+ CR++DIR ++ + HD+ + SV + ++ G D WD
Sbjct: 268 VVLTGGRDSVCRVWDIRTKMQIFVLPHDS---DVFSVLARPTDPQVITGSHDSTIKFWDL 324
Query: 136 MKTERAGILAGHDNRVSCLGV 156
+ + H V + +
Sbjct: 325 RYGKSMATITNHKKTVRAMAL 345
WARNING: HSPs involving 957 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.134 0.435 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 176 176 0.00081 109 3 11 22 0.39 32
31 0.49 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1207
No. of states in DFA: 601 (64 KB)
Total size of DFA: 177 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.72u 0.07s 15.79t Elapsed: 00:00:19
Total cpu time: 15.84u 0.07s 15.91t Elapsed: 00:00:23
Start: Thu Aug 15 10:53:08 2013 End: Thu Aug 15 10:53:31 2013
WARNINGS ISSUED: 2