Query psy15419
Match_columns 332
No_of_seqs 229 out of 1203
Neff 7.7
Searched_HMMs 46136
Date Fri Aug 16 20:31:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15419.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15419hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3770|consensus 100.0 2.1E-57 4.5E-62 444.1 15.5 278 4-290 263-544 (577)
2 cd00842 MPP_ASMase acid sphing 100.0 1.8E-36 3.9E-41 284.6 17.2 163 18-180 131-296 (296)
3 cd07395 MPP_CSTP1 Homo sapiens 99.7 6.2E-16 1.3E-20 142.8 15.3 127 47-188 117-254 (262)
4 TIGR03767 P_acnes_RR metalloph 99.6 5.7E-15 1.2E-19 144.4 14.6 172 46-251 291-473 (496)
5 KOG3770|consensus 99.5 3.2E-14 6.9E-19 140.7 11.1 180 83-332 24-221 (577)
6 cd07396 MPP_Nbla03831 Homo sap 99.5 6.5E-13 1.4E-17 123.2 14.0 132 47-188 104-263 (267)
7 PRK11148 cyclic 3',5'-adenosin 99.4 8E-13 1.7E-17 123.1 11.5 133 49-199 114-262 (275)
8 cd07399 MPP_YvnB Bacillus subt 99.4 2.3E-12 5.1E-17 115.7 11.8 112 81-197 90-211 (214)
9 TIGR03768 RPA4764 metallophosp 99.4 4.5E-12 9.8E-17 123.1 12.5 134 47-185 293-449 (492)
10 cd07378 MPP_ACP5 Homo sapiens 99.3 4.9E-11 1.1E-15 110.8 13.5 98 47-148 106-216 (277)
11 cd07402 MPP_GpdQ Enterobacter 99.3 3.3E-11 7.2E-16 109.4 11.5 120 48-185 101-236 (240)
12 cd00842 MPP_ASMase acid sphing 99.3 1.4E-11 3E-16 115.8 8.2 74 255-332 1-79 (296)
13 cd00839 MPP_PAPs purple acid p 99.2 2.9E-10 6.4E-15 106.4 14.0 93 46-148 108-208 (294)
14 cd07401 MPP_TMEM62_N Homo sapi 99.0 1.5E-09 3.3E-14 100.1 10.8 94 54-150 121-216 (256)
15 PLN02533 probable purple acid 98.9 4.3E-09 9.4E-14 103.9 9.6 86 48-146 242-335 (427)
16 PTZ00422 glideosome-associated 98.6 6.4E-07 1.4E-11 86.8 13.2 85 57-147 175-262 (394)
17 KOG1378|consensus 98.5 4.4E-07 9.5E-12 88.5 8.9 89 48-147 249-346 (452)
18 TIGR03729 acc_ester putative p 98.3 7.5E-07 1.6E-11 81.2 5.3 62 81-146 148-222 (239)
19 cd07383 MPP_Dcr2 Saccharomyces 98.1 3.6E-06 7.8E-11 74.5 5.1 72 78-150 90-181 (199)
20 cd07392 MPP_PAE1087 Pyrobaculu 98.1 8.3E-06 1.8E-10 70.6 6.9 84 54-146 85-174 (188)
21 cd07393 MPP_DR1119 Deinococcus 98.0 2.3E-05 4.9E-10 71.2 8.9 63 82-149 145-209 (232)
22 cd08163 MPP_Cdc1 Saccharomyces 97.9 9.3E-05 2E-09 68.4 10.9 99 40-147 107-230 (257)
23 COG1409 Icc Predicted phosphoh 97.9 6.5E-05 1.4E-09 69.5 9.8 85 55-145 103-193 (301)
24 KOG2679|consensus 97.8 0.0002 4.3E-09 65.6 10.3 99 82-189 193-300 (336)
25 PF00149 Metallophos: Calcineu 97.6 0.00016 3.5E-09 59.6 5.9 61 82-144 132-199 (200)
26 cd07388 MPP_Tt1561 Thermus the 97.0 0.0048 1E-07 55.9 9.2 80 55-144 105-190 (224)
27 PF09423 PhoD: PhoD-like phosp 96.6 0.044 9.5E-07 54.7 14.1 122 48-171 255-407 (453)
28 cd07400 MPP_YydB Bacillus subt 96.6 0.0055 1.2E-07 50.8 5.9 46 103-150 81-130 (144)
29 cd07404 MPP_MS158 Microscilla 96.5 0.0026 5.6E-08 54.3 3.5 58 83-148 86-152 (166)
30 COG1768 Predicted phosphohydro 96.1 0.0076 1.6E-07 52.2 4.1 45 97-146 156-200 (230)
31 KOG1432|consensus 95.7 0.043 9.3E-07 52.1 7.8 127 57-190 203-354 (379)
32 PF12850 Metallophos_2: Calcin 94.2 0.35 7.5E-06 40.0 8.7 74 100-186 81-155 (156)
33 cd07403 MPP_TTHA0053 Thermus t 93.9 0.068 1.5E-06 43.9 3.7 45 102-148 58-106 (129)
34 COG2129 Predicted phosphoester 93.8 0.37 8E-06 43.4 8.4 71 103-187 141-217 (226)
35 COG0622 Predicted phosphoester 92.7 0.31 6.8E-06 42.3 6.1 53 134-195 110-164 (172)
36 cd07379 MPP_239FB Homo sapiens 91.6 0.21 4.6E-06 40.9 3.6 46 99-146 67-117 (135)
37 cd00841 MPP_YfcE Escherichia c 90.9 1.4 3.1E-05 36.6 8.2 72 100-186 75-148 (155)
38 TIGR00040 yfcE phosphoesterase 90.5 1.6 3.5E-05 36.7 8.2 47 133-188 106-154 (158)
39 cd00838 MPP_superfamily metall 90.4 0.45 9.7E-06 37.3 4.4 44 103-148 70-118 (131)
40 KOG4419|consensus 89.7 0.86 1.9E-05 46.4 6.6 119 27-150 146-274 (602)
41 cd07410 MPP_CpdB_N Escherichia 89.0 2 4.2E-05 39.8 8.2 65 79-146 166-231 (277)
42 cd07407 MPP_YHR202W_N Saccharo 88.4 1.3 2.8E-05 41.5 6.5 85 56-148 146-234 (282)
43 cd07394 MPP_Vps29 Homo sapiens 87.8 3.3 7.1E-05 35.9 8.3 47 133-188 106-158 (178)
44 PRK11340 phosphodiesterase Yae 85.1 0.7 1.5E-05 42.9 2.8 38 98-149 181-218 (271)
45 cd07385 MPP_YkuE_C Bacillus su 82.9 0.58 1.3E-05 41.5 1.2 51 85-150 121-171 (223)
46 cd00845 MPP_UshA_N_like Escher 82.7 19 0.00042 32.4 11.2 50 87-147 159-208 (252)
47 cd08165 MPP_MPPE1 human MPPE1 82.6 5.3 0.00012 33.8 6.9 36 126-170 117-152 (156)
48 cd07411 MPP_SoxB_N Thermus the 82.3 36 0.00078 31.2 13.0 52 85-147 168-221 (264)
49 PF14582 Metallophos_3: Metall 81.8 0.64 1.4E-05 42.1 1.0 90 81-187 157-248 (255)
50 cd07409 MPP_CD73_N CD73 ecto-5 81.6 6.6 0.00014 36.6 7.8 53 83-146 166-219 (281)
51 cd07406 MPP_CG11883_N Drosophi 77.1 15 0.00033 33.6 8.7 52 85-147 157-209 (257)
52 cd07397 MPP_DevT Myxococcus xa 75.0 6.4 0.00014 36.0 5.4 89 82-172 130-236 (238)
53 cd07381 MPP_CapA CapA and rela 72.1 49 0.0011 29.7 10.6 64 85-151 161-225 (239)
54 cd07384 MPP_Cdc1_like Saccharo 70.9 6.3 0.00014 33.9 4.2 39 126-170 129-167 (171)
55 cd08166 MPP_Cdc1_like_1 unchar 70.5 6.9 0.00015 34.7 4.4 41 103-150 112-152 (195)
56 cd07412 MPP_YhcR_N Bacillus su 69.9 26 0.00056 32.7 8.5 62 85-146 177-242 (288)
57 TIGR01854 lipid_A_lpxH UDP-2,3 67.4 9.2 0.0002 34.4 4.7 27 122-150 176-202 (231)
58 cd00840 MPP_Mre11_N Mre11 nucl 65.9 6.7 0.00015 34.4 3.5 63 83-148 141-204 (223)
59 cd07405 MPP_UshA_N Escherichia 65.9 35 0.00077 31.8 8.5 48 99-146 174-222 (285)
60 COG0737 UshA 5'-nucleotidase/2 62.5 18 0.00039 36.8 6.2 123 19-145 117-247 (517)
61 PF01784 NIF3: NIF3 (NGG1p int 62.3 14 0.0003 33.6 4.9 53 90-147 44-101 (241)
62 smart00854 PGA_cap Bacterial c 61.0 33 0.00072 30.9 7.1 61 88-151 162-223 (239)
63 PRK09419 bifunctional 2',3'-cy 59.9 42 0.00091 37.8 9.0 58 86-146 824-883 (1163)
64 PF09587 PGA_cap: Bacterial ca 59.6 53 0.0011 29.8 8.2 66 83-151 168-234 (250)
65 cd07382 MPP_DR1281 Deinococcus 58.7 49 0.0011 30.5 7.8 82 47-146 98-179 (255)
66 cd07389 MPP_PhoD Bacillus subt 57.4 30 0.00065 30.6 6.2 46 22-67 120-168 (228)
67 PRK10799 metal-binding protein 57.0 16 0.00034 33.5 4.3 53 90-147 47-103 (247)
68 PRK09453 phosphodiesterase; Pr 57.0 29 0.00062 29.8 5.7 42 134-184 119-162 (182)
69 cd08164 MPP_Ted1 Saccharomyces 55.0 9.6 0.00021 33.7 2.4 33 103-150 129-161 (193)
70 PRK05340 UDP-2,3-diacylglucosa 54.9 13 0.00027 33.7 3.3 61 121-193 177-237 (241)
71 PRK10425 DNase TatD; Provision 52.8 32 0.0007 31.6 5.7 40 81-130 103-142 (258)
72 PRK09419 bifunctional 2',3'-cy 52.6 20 0.00044 40.3 5.0 64 79-146 217-281 (1163)
73 COG1408 Predicted phosphohydro 52.5 11 0.00024 35.3 2.6 37 99-149 192-228 (284)
74 TIGR00486 YbgI_SA1388 dinuclea 52.1 29 0.00063 31.8 5.2 53 90-147 48-104 (249)
75 COG2908 Uncharacterized protei 51.8 17 0.00036 33.2 3.4 25 123-149 179-203 (237)
76 cd07425 MPP_Shelphs Shewanella 51.2 24 0.00052 31.3 4.4 25 123-149 159-183 (208)
77 cd08162 MPP_PhoA_N Synechococc 50.0 28 0.0006 33.1 4.9 37 100-146 209-245 (313)
78 PRK09558 ushA bifunctional UDP 48.6 71 0.0015 32.8 7.9 65 80-145 192-257 (551)
79 KOG3152|consensus 47.4 30 0.00066 31.8 4.3 39 87-131 59-99 (278)
80 cd07408 MPP_SA0022_N Staphyloc 47.3 1.3E+02 0.0027 27.4 8.7 84 99-196 172-255 (257)
81 KOG3325|consensus 46.7 95 0.0021 26.4 6.8 71 123-200 98-170 (183)
82 cd02960 AGR Anterior Gradient 46.3 16 0.00034 30.2 2.2 26 83-108 4-32 (130)
83 TIGR01530 nadN NAD pyrophospha 46.3 78 0.0017 32.5 7.8 53 80-146 166-219 (550)
84 COG3540 PhoD Phosphodiesterase 46.2 23 0.0005 35.6 3.7 119 50-170 295-445 (522)
85 KOG1432|consensus 44.6 46 0.001 32.1 5.3 13 320-332 99-111 (379)
86 COG5555 Cytolysin, a secreted 42.3 11 0.00024 35.3 0.8 118 17-149 188-338 (392)
87 PRK11148 cyclic 3',5'-adenosin 41.5 31 0.00067 31.8 3.7 26 307-332 38-66 (275)
88 cd00844 MPP_Dbr1_N Dbr1 RNA la 41.4 24 0.00052 32.7 2.9 44 100-145 165-228 (262)
89 cd07398 MPP_YbbF-LpxH Escheric 41.2 33 0.00071 29.9 3.7 25 123-149 181-205 (217)
90 COG2730 BglC Endoglucanase [Ca 37.0 1.7E+02 0.0038 28.7 8.4 77 26-112 65-142 (407)
91 COG0084 TatD Mg-dependent DNas 36.5 70 0.0015 29.5 5.1 42 80-131 106-147 (256)
92 TIGR01390 CycNucDiestase 2',3' 36.2 47 0.001 34.8 4.4 62 80-146 179-241 (626)
93 cd07390 MPP_AQ1575 Aquifex aeo 35.3 45 0.00097 28.3 3.5 35 99-148 106-140 (168)
94 PRK09420 cpdB bifunctional 2', 32.1 1.2E+02 0.0027 31.9 6.7 58 86-145 205-263 (649)
95 PF00150 Cellulase: Cellulase 30.0 75 0.0016 28.6 4.3 32 81-112 57-88 (281)
96 PRK09418 bifunctional 2',3'-cy 29.5 81 0.0017 34.0 4.9 63 79-146 227-290 (780)
97 PF12697 Abhydrolase_6: Alpha/ 28.9 2.6E+02 0.0056 23.0 7.2 51 55-107 23-73 (228)
98 cd03240 ABC_Rad50 The catalyti 26.2 1.2E+02 0.0026 26.5 4.7 23 87-109 160-183 (204)
99 PRK11907 bifunctional 2',3'-cy 25.3 1.7E+02 0.0037 31.7 6.4 58 85-145 295-354 (814)
100 PF13899 Thioredoxin_7: Thiore 24.6 71 0.0015 23.3 2.5 22 88-109 6-27 (82)
101 PRK11340 phosphodiesterase Yae 24.1 91 0.002 28.7 3.7 25 308-332 66-91 (271)
102 cd07380 MPP_CWF19_N Schizosacc 23.3 55 0.0012 27.6 1.9 43 100-144 69-121 (150)
103 COG3885 Uncharacterized conser 23.0 2.5E+02 0.0053 25.7 5.9 32 115-146 145-179 (261)
104 COG4130 Predicted sugar epimer 22.8 4.6E+02 0.01 23.9 7.5 67 55-130 61-134 (272)
105 COG1105 FruK Fructose-1-phosph 22.7 3E+02 0.0066 26.2 6.9 51 77-130 108-158 (310)
106 PF13481 AAA_25: AAA domain; P 22.2 1.4E+02 0.0031 25.2 4.4 11 56-66 141-151 (193)
107 TIGR01166 cbiO cobalt transpor 21.2 1.9E+02 0.0042 24.6 5.0 31 78-109 157-187 (190)
108 TIGR01189 ccmA heme ABC export 20.4 2.2E+02 0.0048 24.4 5.2 26 85-110 163-188 (198)
109 cd03232 ABC_PDR_domain2 The pl 20.3 2.4E+02 0.0052 24.2 5.4 24 86-109 145-168 (192)
110 COG3910 Predicted ATPase [Gene 20.0 1.3E+02 0.0028 27.0 3.5 32 80-112 160-191 (233)
No 1
>KOG3770|consensus
Probab=100.00 E-value=2.1e-57 Score=444.05 Aligned_cols=278 Identities=35% Similarity=0.641 Sum_probs=263.3
Q ss_pred CCCCCCCCCCCCCCCCcchHHHHHHHHhhcCCCHHHHHHhhhCcceEEEecCCEEEEEEcCccccccccccccCCCCchh
Q psy15419 4 NFSDLFSPYFVQGPTSTSWVYESFIQYWGWSLPESARQTFLKGGYYSFLTEKNLRIIVLNTNVYQKLNWWNVLYPVDPND 83 (332)
Q Consensus 4 ~p~n~~~~~~~~~~~~~~~l~~~l~~~w~~~l~~~~~~~f~~~GyYs~~~~~~lriI~LNT~~~~~~n~~~~~~~~dp~~ 83 (332)
-|+|+|+|+.++......|||++++.+|++|||.+++++|++||||+..+.+|+|+|+|||++++..|+|++.+..||.+
T Consensus 263 ~P~N~F~~~~~~~~~~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~ 342 (577)
T KOG3770|consen 263 HPVNLFAPGSVPKRHSQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPID 342 (577)
T ss_pred CcHhhcCCCCCcchhhhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchH
Confidence 59999999999988899999999999999999999999999999999998899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCcEEEEecCCCCCcceeee
Q psy15419 84 QLSWLASTLLEAEKNNEKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYEDITIFYDKNNSSRATNVA 163 (332)
Q Consensus 84 Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~~~~~~~~~~~~~~~~ 163 (332)
||+||..||++||.+|++|+|++|||||..+|...|+..|.+++.||.++|.++|+||+|.|+|+++++... ++|++++
T Consensus 343 ~lqWf~~~L~~ae~~GekVhil~HIPpG~~~c~~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~f~v~yde~~-~~p~~v~ 421 (577)
T KOG3770|consen 343 QLQWFVDQLQEAESAGEKVHILGHIPPGDGVCLEGWSINFYRIVNRFRSTIAGQFYGHTHIDEFRVFYDEET-GHPIAVA 421 (577)
T ss_pred HhhHHHHHHHHHHhcCCEEEEEEeeCCCCcchhhhhhHHHHHHHHHHHHhhhhhccccCcceeEEEEecccc-CCceeee
Confidence 999999999999999999999999999998899999999999999999999999999999999999998764 5999999
Q ss_pred eeecccccccCCCCcEEEEEEe-CCeeEEeeEEEEeeccccccCC-CCCceEEeeeeccccCCCCCCcccccCCCCCchh
Q psy15419 164 YNGGSITSYYNVNPNYRLYKVA-RGTWEVTDFDSYTYNISSIVND-SEPDWIKLYSFKEEYGLESTRPKFQLSRCCGSGD 241 (332)
Q Consensus 164 ~~~psvtp~~~~nP~~rv~~~d-~~t~~l~d~~~y~~dl~~~n~~-~~~~w~~~Y~~~~~Y~~~~~sp~~~~~~~~~~~~ 241 (332)
+++||++++.+.||+||+|.++ ..++.+.|+.+|++||+++|.+ ..|.|+++|+..++|+++++||. +|+
T Consensus 422 ~i~~svtty~~~~p~yr~y~~~~~~~~~~~d~~ty~~Nlt~an~~~e~p~W~~~y~~~~~y~~~d~sp~--------~i~ 493 (577)
T KOG3770|consen 422 YIGPSVTTYYNKNPGYRIYAVDSTISFSVPDHRTYFYNLTSANLQPESPEWELLYTAFEAYGMQDQSPF--------SID 493 (577)
T ss_pred eccccceehhccCCCceecccCcccceecccceEEEEehhhhcCCCCCCchHhhhhhhhhhCcccCCch--------hhh
Confidence 9999999999999999999999 4558999999999999999988 88999999999999999999999 999
Q ss_pred hhhhhhccCCc-ee-EEEEEeeccCCCcCCCCCcCCCCCcccCCCCCCCCC
Q psy15419 242 RAISYLDSGDE-IS-IIQLTDIHYDPKYLAGKTAHCIAPLCCRVDQPNASS 290 (332)
Q Consensus 242 ~l~~~~~~~~~-l~-Y~~~~~~~~dp~~~~gCd~~C~~~~~C~~~~~~~~~ 290 (332)
.+++||++|.. ++ |+++..+..++....+|+..|+...+|+.+.+...+
T Consensus 494 ~~~~~~~~d~~lfrk~~~~~~~~~~~~~~~~cd~~C~~~~ic~~~~~~~~~ 544 (577)
T KOG3770|consen 494 KLLDRMKTDTKLFRKYKRYPSRNMPPEIVYQCDTACYMQSICDTRSGIGYA 544 (577)
T ss_pred hHhhhhccCHHHHhhceecCCCCCChhhccccchhhHHHhhhhhhhhcchh
Confidence 99999999995 44 999887777776556899999999999999988766
No 2
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=100.00 E-value=1.8e-36 Score=284.65 Aligned_cols=163 Identities=45% Similarity=0.810 Sum_probs=147.3
Q ss_pred CCcchHHHHHHHHhhcCCCHHHHHHhhhCcceEEEecCCEEEEEEcCccccccccccc-cCCCCchhHHHHHHHHHHHHH
Q psy15419 18 TSTSWVYESFIQYWGWSLPESARQTFLKGGYYSFLTEKNLRIIVLNTNVYQKLNWWNV-LYPVDPNDQLSWLASTLLEAE 96 (332)
Q Consensus 18 ~~~~~l~~~l~~~w~~~l~~~~~~~f~~~GyYs~~~~~~lriI~LNT~~~~~~n~~~~-~~~~dp~~Ql~WL~~~L~~a~ 96 (332)
...+|+|+.++++|++|++.++.++|.++|||++.+.+++|||+|||+.++..+.+.. ....++.+||+||+++|++|+
T Consensus 131 ~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~ 210 (296)
T cd00842 131 NSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAE 210 (296)
T ss_pred ccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999999778999999999999988877654 356788999999999999999
Q ss_pred hCCCceEEEeccCCCCCCch--HHHHHHHHHHHHHhhcceeeeEeecccCCcEEEEecCCCCCcceeeeeeecccccccC
Q psy15419 97 KNNEKVHILSHIPPGSEDTM--QVFQREYRKIINRFEHTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSITSYYN 174 (332)
Q Consensus 97 ~~~~~ViI~~HiPp~~~~~~--~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~~~~~~~~~~~~~~~~~~~psvtp~~~ 174 (332)
+++++|+|++||||+..... ..|.++|.+|++||+++|+++|+||+|.++|+++++..+...+..+++++|||||+++
T Consensus 211 ~~~~~v~I~~HiPp~~~~~~~~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~~~~~~~~~~~~~~~~~~~psitp~~~ 290 (296)
T cd00842 211 QAGEKVWIIGHIPPGVNSYDTLENWSERYLQIINRYSDTIAGQFFGHTHRDEFRVFYDDNDTGEPINVALIAPSVTPYSG 290 (296)
T ss_pred HCCCeEEEEeccCCCCcccccchHHHHHHHHHHHHHHHhhheeeecccccceEEEEeCCCCCCCceEEEEecCccCcCCC
Confidence 99999999999999975433 3789999999999998899999999999999999977643478899999999999999
Q ss_pred CCCcEE
Q psy15419 175 VNPNYR 180 (332)
Q Consensus 175 ~nP~~r 180 (332)
+|||||
T Consensus 291 ~nP~~r 296 (296)
T cd00842 291 NNPGFR 296 (296)
T ss_pred CCCCCC
Confidence 999998
No 3
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.69 E-value=6.2e-16 Score=142.78 Aligned_cols=127 Identities=23% Similarity=0.277 Sum_probs=94.4
Q ss_pred cceEEEecCCEEEEEEcCccccccccccccCCCCchhHHHHHHHHHHHHH-hCCCceEEEeccCCCCCC--c-------h
Q psy15419 47 GYYSFLTEKNLRIIVLNTNVYQKLNWWNVLYPVDPNDQLSWLASTLLEAE-KNNEKVHILSHIPPGSED--T-------M 116 (332)
Q Consensus 47 GyYs~~~~~~lriI~LNT~~~~~~n~~~~~~~~dp~~Ql~WL~~~L~~a~-~~~~~ViI~~HiPp~~~~--~-------~ 116 (332)
.||++. .+++|+|+|||+.+...+. .+..+.+|++||+++|++++ .++++++|++|+||.... . .
T Consensus 117 ~~y~~~-~~~~~~i~lds~~~~~~~~----~~~~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~ 191 (262)
T cd07395 117 DYFSFW-VGGVFFIVLNSQLFFDPSE----VPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIP 191 (262)
T ss_pred cceEEE-ECCEEEEEeccccccCccc----cccchHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcC
Confidence 478886 5899999999997654321 13467899999999999986 456799999999997421 1 1
Q ss_pred HHHHHHHHHHHHHhhcceeeeEeecccCCcEEEEecCCCCCcceeeeeeeccc-ccccCCCCcEEEEEEeCCe
Q psy15419 117 QVFQREYRKIINRFEHTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSI-TSYYNVNPNYRLYKVARGT 188 (332)
Q Consensus 117 ~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~~~~~~~~~~~~~~~~~~~psv-tp~~~~nP~~rv~~~d~~t 188 (332)
...+.++.+++++| .|.++|+||+|.+....+. + ...+++|+. .++..++||||+++++++.
T Consensus 192 ~~~~~~l~~ll~~~--~V~~v~~GH~H~~~~~~~~---g-----~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 254 (262)
T cd07395 192 KSVRKPLLDKFKKA--GVKAVFSGHYHRNAGGRYG---G-----LEMVVTSAIGAQLGNDKSGLRIVKVTEDK 254 (262)
T ss_pred HHHHHHHHHHHHhc--CceEEEECccccCCceEEC---C-----EEEEEcCceecccCCCCCCcEEEEECCCc
Confidence 23457899999998 5899999999999875432 2 112334433 4677889999999998764
No 4
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.62 E-value=5.7e-15 Score=144.40 Aligned_cols=172 Identities=19% Similarity=0.182 Sum_probs=112.8
Q ss_pred CcceEEEecCCEEEEEEcCccccccccccccCCCCchhHHHHHHHHHHHHHhCCCceEEEeccCCCCCCc-----h----
Q psy15419 46 GGYYSFLTEKNLRIIVLNTNVYQKLNWWNVLYPVDPNDQLSWLASTLLEAEKNNEKVHILSHIPPGSEDT-----M---- 116 (332)
Q Consensus 46 ~GyYs~~~~~~lriI~LNT~~~~~~n~~~~~~~~dp~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~~~-----~---- 116 (332)
.+||++++.+++|||+|||+..... ..+.....||+||+++|+++ ++++|+|++||||..... .
T Consensus 291 ~~YYSFd~~ggvrfIvLDSt~~~G~-----~~G~L~eeQL~WLeqeLa~a--~~k~VVVf~HHPp~s~g~~~~Dp~~pg~ 363 (496)
T TIGR03767 291 TGYYTFDIAGGVRGISMDTTNRAGG-----DEGSLGQTQFKWIKDTLRAS--SDTLFVLFSHHTSWSMVNELTDPVDPGE 363 (496)
T ss_pred CceEEEEeECCEEEEEEeCCCcCCC-----cCCccCHHHHHHHHHHHhcC--CCCCEEEEECCCCccccccccccccccc
Confidence 4699999889999999999975321 24667789999999999964 468899999999875210 0
Q ss_pred -HHHHHHHHHHHHHhhcceeeeEeecccCCcEEEEecCCCCC-cceeeeeeecccccccCCCCcEEEEEEeCCeeEEeeE
Q psy15419 117 -QVFQREYRKIINRFEHTIAAEFNGHTHYEDITIFYDKNNSS-RATNVAYNGGSITSYYNVNPNYRLYKVARGTWEVTDF 194 (332)
Q Consensus 117 -~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~~~~~~~~~~-~~~~~~~~~psvtp~~~~nP~~rv~~~d~~t~~l~d~ 194 (332)
..-.+++.++|++|+ .|+++|+||+|.+.+.-+...++.. ..-.+...+.|+.-+ +=.||++|+-...-.-+..
T Consensus 364 ~~~n~~eLldLL~~yp-nV~aVfsGHvH~n~i~~~~~~~~~~p~~gfweI~TaSlvdf---Pq~~Ri~Ei~~n~dgt~si 439 (496)
T TIGR03767 364 KRHLGTELVSLLLEHP-NVLAWVNGHTHSNKITAHRRVEGVGKDKGFWEINTASHIDF---PQQGRIIELADNQDGTVSI 439 (496)
T ss_pred cccCHHHHHHHHhcCC-CceEEEECCcCCCccccccCCCCCCCcCCeEEEeccccccC---CCCceEEEEEeCCCCcEEE
Confidence 112468999999997 6889999999999876543222210 111456667776643 4578999885321111111
Q ss_pred EEEeeccccccCCCCCceEEeeeeccccCCCCCCcccccCCCCCchhhhhhhhccCC
Q psy15419 195 DSYTYNISSIVNDSEPDWIKLYSFKEEYGLESTRPKFQLSRCCGSGDRAISYLDSGD 251 (332)
Q Consensus 195 ~~y~~dl~~~n~~~~~~w~~~Y~~~~~Y~~~~~sp~~~~~~~~~~~~~l~~~~~~~~ 251 (332)
.+ .++..+ .| -+-...++||. .+..|..++.-++
T Consensus 440 ~t--t~vd~~----~~---------~~~d~~~~~~~--------~la~~~rel~~n~ 473 (496)
T TIGR03767 440 FT--TLIESA----AP---------YAWDAADLEPL--------GLAALYRELGAND 473 (496)
T ss_pred EE--EecccC----CC---------ccCCccccChH--------HHHHHHHHHhccC
Confidence 11 122111 01 11122577888 8999988887665
No 5
>KOG3770|consensus
Probab=99.54 E-value=3.2e-14 Score=140.75 Aligned_cols=180 Identities=26% Similarity=0.423 Sum_probs=127.4
Q ss_pred hHHHHHHHHHHHHHhC-----CC---ceEEEeccCCCCCC----c---hHHHHHHHHHHHHHhhcceeeeEeecccCCcE
Q psy15419 83 DQLSWLASTLLEAEKN-----NE---KVHILSHIPPGSED----T---MQVFQREYRKIINRFEHTIAAEFNGHTHYEDI 147 (332)
Q Consensus 83 ~Ql~WL~~~L~~a~~~-----~~---~ViI~~HiPp~~~~----~---~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f 147 (332)
.|+..++..|..++.- .+ .|++..|.-++... | .....++|..++.|+...+ -++|||.|.|..
T Consensus 24 ~~c~~c~~~~~~~~~~~~~~~~~~~v~v~~~~~c~~~~~~~~~vc~~~~~~f~~~f~~v~~r~~~~~-~~icg~~l~~~c 102 (577)
T KOG3770|consen 24 AQCTFCEKELSNAQKFPARISTNCTVIVFAVAVCELFVIEPTPVCTWIIDEFNDEFFDVFVRSANSP-EEICGHFLPDTC 102 (577)
T ss_pred chhhhhhhhhhhHHhhhhcccccchhhhhHHHHhccccccCcchhhHHHHHHHHHHHHHHHHHhcCH-HHHhhcccCCcc
Confidence 3888888888776542 11 24444555554321 1 2456788999999998777 899999999776
Q ss_pred EEEecCCCCCcceeeeeeecccccccCCCCcEEEEEEeCCeeEEeeEEEEeeccccccCCCCCceEEeeeeccccCCCCC
Q psy15419 148 TIFYDKNNSSRATNVAYNGGSITSYYNVNPNYRLYKVARGTWEVTDFDSYTYNISSIVNDSEPDWIKLYSFKEEYGLEST 227 (332)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~psvtp~~~~nP~~rv~~~d~~t~~l~d~~~y~~dl~~~n~~~~~~w~~~Y~~~~~Y~~~~~ 227 (332)
....+... ....+.+.+|..+|+... -.
T Consensus 103 ~~~~~~~~--~~w~~~l~~~~~~p~~p~--------------------------------------------------~~ 130 (577)
T KOG3770|consen 103 GDIVDPLE--NNWNLTLPGPPKPPRLPK--------------------------------------------------LP 130 (577)
T ss_pred ccccchhh--hcceeeccCCCCCCCCCC--------------------------------------------------CC
Confidence 64432111 111122222233332100 00
Q ss_pred CcccccCCCCCchhhhhhhhccCCceeEEEEEeeccCCCcCCCCCcCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCh
Q psy15419 228 RPKFQLSRCCGSGDRAISYLDSGDEISIIQLTDIHYDPKYLAGKTAHCIAPLCCRVDQPNASSETDRATKYGHYDNCDMP 307 (332)
Q Consensus 228 sp~~~~~~~~~~~~~l~~~~~~~~~l~Y~~~~~~~~dp~~~~gCd~~C~~~~~C~~~~~~~~~~~~~a~~~G~~~~Cdsp 307 (332)
.| ..+++.+|++|++|.|.||.|..|.+..|..+.||+-..+........||+||+|..||+|
T Consensus 131 ~p-----------------~~~~p~~rvlhltDiH~D~~Y~~gs~a~c~~p~ccr~s~~~p~~~~~~Ag~wG~y~~CD~P 193 (577)
T KOG3770|consen 131 LP-----------------LKNNPTFRVLHLTDIHLDPDYSEGSDADCDCPMCCRNSDGTPSGTKVAAGPWGDYGKCDSP 193 (577)
T ss_pred CC-----------------CCCCCceeEEEeeccccCcccccCCcccccCccccccCCCCCCCccccCCCCCCcCCCCCC
Confidence 11 1235678899999999999999999999999999999988877666799999999999999
Q ss_pred HHHHHHHHHHHHhC---CCEEEEcCCCC
Q psy15419 308 LDVIRSALEQIKKH---KGYLLCSGDAG 332 (332)
Q Consensus 308 ~~l~~s~~~~i~~~---~~~~~~tgD~~ 332 (332)
+.+++++|++||++ +||||||||.+
T Consensus 194 ~~lies~L~~ike~~~~iD~I~wTGD~~ 221 (577)
T KOG3770|consen 194 KRLIESALDHIKENHKDIDYIIWTGDNV 221 (577)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEeCCCC
Confidence 99999999999983 69999999974
No 6
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.47 E-value=6.5e-13 Score=123.20 Aligned_cols=132 Identities=24% Similarity=0.293 Sum_probs=96.6
Q ss_pred cceEEEecCCEEEEEEcCccccccc------------------------cccccCCCCchhHHHHHHHHHHHHHhCCCce
Q psy15419 47 GYYSFLTEKNLRIIVLNTNVYQKLN------------------------WWNVLYPVDPNDQLSWLASTLLEAEKNNEKV 102 (332)
Q Consensus 47 GyYs~~~~~~lriI~LNT~~~~~~n------------------------~~~~~~~~dp~~Ql~WL~~~L~~a~~~~~~V 102 (332)
.||++. .+++|+|+|||..+.... .+..+++.....|++||+++|+.++.++++|
T Consensus 104 ~yysf~-~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~~~~v 182 (267)
T cd07396 104 PYYSFS-PGGIRFIVLDGYDISALGRPEDTPKAENADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADANGEKV 182 (267)
T ss_pred ceEEEe-cCCcEEEEEeCCccccccCCCCChhhhhHHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHhcCCeE
Confidence 488887 679999999997542110 0111345667899999999999998788999
Q ss_pred EEEeccCCCCCC---chHHH-HHHHHHHHHHhhcceeeeEeecccCCcEEEEecCCCCCcceeeeeeecccccccCCCCc
Q psy15419 103 HILSHIPPGSED---TMQVF-QREYRKIINRFEHTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSITSYYNVNPN 178 (332)
Q Consensus 103 iI~~HiPp~~~~---~~~~~-~~~~~~li~~y~~~I~~~f~GH~H~d~f~~~~~~~~~~~~~~~~~~~psvtp~~~~nP~ 178 (332)
+|++|+|+.... ....| .+++.+++++|+ .|.++|+||+|.+..... .| ...+++||++-...+-|.
T Consensus 183 iV~~Hhp~~~~~~~~~~~~~~~~~~~~ll~~~~-~V~~v~~GH~H~~~~~~~---~g-----i~~~~~~a~~~~~~~~~~ 253 (267)
T cd07396 183 IIFSHFPLHPESTSPHGLLWNHEEVLSILRAYG-CVKACISGHDHEGGYAQR---HG-----IHFLTLEGMVETPPESNA 253 (267)
T ss_pred EEEEeccCCCCCCCccccccCHHHHHHHHHhCC-CEEEEEcCCcCCCCcccc---CC-----eeEEEechhhcCCCCCCc
Confidence 999999987532 11223 467899999986 688999999999976432 12 457788888755456678
Q ss_pred EEEEEEeCCe
Q psy15419 179 YRLYKVARGT 188 (332)
Q Consensus 179 ~rv~~~d~~t 188 (332)
|.++++-.+.
T Consensus 254 ~~~~~~~~~~ 263 (267)
T cd07396 254 FGVVIVYEDR 263 (267)
T ss_pred eEEEEEeCCc
Confidence 8888876553
No 7
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.43 E-value=8e-13 Score=123.10 Aligned_cols=133 Identities=19% Similarity=0.205 Sum_probs=90.2
Q ss_pred eEEEecCCEEEEEEcCccccccccccccCCCCchhHHHHHHHHHHHHHhCCCceEEEeccCCCCCC--ch----HHHHHH
Q psy15419 49 YSFLTEKNLRIIVLNTNVYQKLNWWNVLYPVDPNDQLSWLASTLLEAEKNNEKVHILSHIPPGSED--TM----QVFQRE 122 (332)
Q Consensus 49 Ys~~~~~~lriI~LNT~~~~~~n~~~~~~~~dp~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~~--~~----~~~~~~ 122 (332)
+.+...+++++|+|||...... .+.....|++||+++|++++ +++++|++||||.... .. ....++
T Consensus 114 ~~~~~~~~~~~i~Lds~~~g~~------~G~l~~~ql~wL~~~L~~~~--~~~~vv~~hH~P~~~~~~~~d~~~l~n~~~ 185 (275)
T PRK11148 114 KHVLIGEHWQILLLDSQVFGVP------HGELSEYQLEWLERKLADAP--ERHTLVLLHHHPLPAGCAWLDQHSLRNAHE 185 (275)
T ss_pred ceEEecCCEEEEEecCCCCCCc------CCEeCHHHHHHHHHHHhhCC--CCCeEEEEcCCCCCCCcchhhccCCCCHHH
Confidence 3343357899999999865422 35557899999999999874 5677888888775421 10 012468
Q ss_pred HHHHHHHhhcceeeeEeecccCCcEEEEecCCCCCcceeeeeeecccccc----------cCCCCcEEEEEEeCCeeEEe
Q psy15419 123 YRKIINRFEHTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSITSY----------YNVNPNYRLYKVARGTWEVT 192 (332)
Q Consensus 123 ~~~li~~y~~~I~~~f~GH~H~d~f~~~~~~~~~~~~~~~~~~~psvtp~----------~~~nP~~rv~~~d~~t~~l~ 192 (332)
|.+++++|+ .|+++|+||+|.+....+ .| ...+++||++.. ...+||||+++++++ +.+.
T Consensus 186 l~~ll~~~~-~v~~vl~GH~H~~~~~~~---~g-----i~~~~~ps~~~q~~~~~~~~~~~~~~~g~~~~~l~~~-g~~~ 255 (275)
T PRK11148 186 LAEVLAKFP-NVKAILCGHIHQELDLDW---NG-----RRLLATPSTCVQFKPHCTNFTLDTVAPGWRELELHAD-GSLE 255 (275)
T ss_pred HHHHHhcCC-CceEEEecccChHHhceE---CC-----EEEEEcCCCcCCcCCCCCccccccCCCcEEEEEEcCC-CcEE
Confidence 999999996 688999999999754321 12 235567776621 134689999999764 3465
Q ss_pred eEEEEee
Q psy15419 193 DFDSYTY 199 (332)
Q Consensus 193 d~~~y~~ 199 (332)
....+.-
T Consensus 256 ~~~~~~~ 262 (275)
T PRK11148 256 TEVHRLA 262 (275)
T ss_pred EEEEEcC
Confidence 5555543
No 8
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.40 E-value=2.3e-12 Score=115.74 Aligned_cols=112 Identities=15% Similarity=0.217 Sum_probs=82.1
Q ss_pred chhHHHHHHHHHHHHHhCCCceEEEeccCCCCCC-c---h------HHHHHHHHHHHHHhhcceeeeEeecccCCcEEEE
Q psy15419 81 PNDQLSWLASTLLEAEKNNEKVHILSHIPPGSED-T---M------QVFQREYRKIINRFEHTIAAEFNGHTHYEDITIF 150 (332)
Q Consensus 81 p~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~~-~---~------~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~~~ 150 (332)
+.+|++||+++|++++ +++|||++|+|+.... . . ....+.+.+|+++|+ .|.++|+||+|.......
T Consensus 90 ~~~ql~WL~~~L~~~~--~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~-~V~~v~~GH~H~~~~~~~ 166 (214)
T cd07399 90 RDEVLQWANEVLKKHP--DRPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKND-NVFMVLSGHVHGAGRTTL 166 (214)
T ss_pred CHHHHHHHHHHHHHCC--CCCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCC-CEEEEEccccCCCceEEE
Confidence 4799999999998653 6899999999997532 1 1 122356889999997 688999999999987766
Q ss_pred ecCCCCCcceeeeeeecccccccCCCCcEEEEEEeCCeeEEeeEEEE
Q psy15419 151 YDKNNSSRATNVAYNGGSITSYYNVNPNYRLYKVARGTWEVTDFDSY 197 (332)
Q Consensus 151 ~~~~~~~~~~~~~~~~psvtp~~~~nP~~rv~~~d~~t~~l~d~~~y 197 (332)
........++..++..+...|. +.||.||++++|++.. .+++.+|
T Consensus 167 ~~~~~~g~~v~~~~~~~q~~~~-~g~~~~r~~~f~~~~~-~i~~~ty 211 (214)
T cd07399 167 VSVGDAGRTVHQMLADYQGEPN-GGNGFLRLLEFDPDNN-KIDVRTY 211 (214)
T ss_pred cccCCCCCEeeEEeecccCCCC-CCcceEEEEEEecCCC-EEEEEeC
Confidence 3222112555555555666665 4599999999998854 6777776
No 9
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=99.37 E-value=4.5e-12 Score=123.15 Aligned_cols=134 Identities=16% Similarity=0.270 Sum_probs=88.3
Q ss_pred cceEEEecC--CEEEEEEcCccccccccc-cccCCCCchhHHHHHHHHHHHHHhCCCceEEEeccCCCC--CCchHHHH-
Q psy15419 47 GYYSFLTEK--NLRIIVLNTNVYQKLNWW-NVLYPVDPNDQLSWLASTLLEAEKNNEKVHILSHIPPGS--EDTMQVFQ- 120 (332)
Q Consensus 47 GyYs~~~~~--~lriI~LNT~~~~~~n~~-~~~~~~dp~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~--~~~~~~~~- 120 (332)
.||++++.+ ++|+|+|||..+...... ....+.....||+||+++|+.+.++++.|+|++|+|... ......|.
T Consensus 293 ~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a~~p~VVV~hHpPi~t~gi~~md~w~~ 372 (492)
T TIGR03768 293 ACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQADGQLMIIAAHIPIAVSPIGSEMEWWL 372 (492)
T ss_pred ceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcCCCceEEEEeCCCcccCCccchhhhcc
Confidence 389998667 459999999986532110 112455668999999999998876666677777777653 11223343
Q ss_pred ---------------HHHHHHHHHhhcceeeeEeecccCCcEEEEecCCCCCcce--eeeeeecccccccCCCCcEEEEE
Q psy15419 121 ---------------REYRKIINRFEHTIAAEFNGHTHYEDITIFYDKNNSSRAT--NVAYNGGSITSYYNVNPNYRLYK 183 (332)
Q Consensus 121 ---------------~~~~~li~~y~~~I~~~f~GH~H~d~f~~~~~~~~~~~~~--~~~~~~psvtp~~~~nP~~rv~~ 183 (332)
.++.++|++|+ .|+++|+||.|+...+.+.+..+. +|. -....+.|+.- -+=.||++|
T Consensus 373 ~~~~~~~~L~n~~~~~eLlaLL~~hP-nVla~LsGHvHrn~v~a~~~p~~~-~pe~gFWeveTaSl~D---fPQq~R~~E 447 (492)
T TIGR03768 373 GAADANPDLQNAVSLTGLVTTLQKYP-NLLMWIAGHRHLNTVKAFPSPDPA-RPEYGFWQVETASLRD---FPQQFRTFE 447 (492)
T ss_pred ccccccccccccccHHHHHHHHhcCC-CeEEEEcCCcccccccccCCCCCC-CCcCceEEEeehhhcc---chhhceEEE
Confidence 38999999998 578999999999988765443321 221 23333444442 234577776
Q ss_pred Ee
Q psy15419 184 VA 185 (332)
Q Consensus 184 ~d 185 (332)
+-
T Consensus 448 i~ 449 (492)
T TIGR03768 448 IY 449 (492)
T ss_pred EE
Confidence 63
No 10
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=99.28 E-value=4.9e-11 Score=110.81 Aligned_cols=98 Identities=17% Similarity=0.226 Sum_probs=72.4
Q ss_pred cceEEEec-----CCEEEEEEcCccccccccc-----cccCCCCchhHHHHHHHHHHHHHhCCCceEEEeccCCCCCC--
Q psy15419 47 GYYSFLTE-----KNLRIIVLNTNVYQKLNWW-----NVLYPVDPNDQLSWLASTLLEAEKNNEKVHILSHIPPGSED-- 114 (332)
Q Consensus 47 GyYs~~~~-----~~lriI~LNT~~~~~~n~~-----~~~~~~dp~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~~-- 114 (332)
.||++... ++++||+|||..+...... ....+.....|++||+++|+++++ +.+||++|+|+....
T Consensus 106 ~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~~~~Q~~wL~~~L~~~~~--~~~iv~~H~P~~~~~~~ 183 (277)
T cd07378 106 YYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKLAEEQLAWLEKTLAASTA--DWKIVVGHHPIYSSGEH 183 (277)
T ss_pred hheEEEeecCCCCCEEEEEEEeChhHcCccccccccccCcchhhHHHHHHHHHHHHHhcCC--CeEEEEeCccceeCCCC
Confidence 47888643 2799999999987532210 011344578999999999998763 789999999997532
Q ss_pred -chHHHHHHHHHHHHHhhcceeeeEeecccCCcEE
Q psy15419 115 -TMQVFQREYRKIINRFEHTIAAEFNGHTHYEDIT 148 (332)
Q Consensus 115 -~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~ 148 (332)
.....++++.+++++|. |..+|+||+|..+..
T Consensus 184 ~~~~~~~~~l~~l~~~~~--v~~vl~GH~H~~~~~ 216 (277)
T cd07378 184 GPTSCLVDRLLPLLKKYK--VDAYLSGHDHNLQHI 216 (277)
T ss_pred CCcHHHHHHHHHHHHHcC--CCEEEeCCcccceee
Confidence 11244678999999994 789999999997654
No 11
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.27 E-value=3.3e-11 Score=109.35 Aligned_cols=120 Identities=21% Similarity=0.250 Sum_probs=85.7
Q ss_pred ceEEEecCCEEEEEEcCccccccccccccCCCCchhHHHHHHHHHHHHHhCCCceEEEeccCCCCCCc--hHH----HHH
Q psy15419 48 YYSFLTEKNLRIIVLNTNVYQKLNWWNVLYPVDPNDQLSWLASTLLEAEKNNEKVHILSHIPPGSEDT--MQV----FQR 121 (332)
Q Consensus 48 yYs~~~~~~lriI~LNT~~~~~~n~~~~~~~~dp~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~~~--~~~----~~~ 121 (332)
+|++. .+++++|+|||...... .+.....|++||+++|++++ +++++|++|+||..... ... -.+
T Consensus 101 ~~~~~-~~~~~~i~lds~~~~~~------~~~~~~~ql~wL~~~L~~~~--~~~~il~~H~pp~~~~~~~~~~~~~~~~~ 171 (240)
T cd07402 101 QYVVD-LGGWRLILLDSSVPGQH------GGELCAAQLDWLEAALAEAP--DKPTLVFLHHPPFPVGIAWMDAIGLRNAE 171 (240)
T ss_pred ceeEe-cCCEEEEEEeCCCCCCc------CCEECHHHHHHHHHHHHhCC--CCCEEEEECCCCccCCchhhhhhhCCCHH
Confidence 56775 68999999999875331 23446799999999999875 68999999999975321 111 257
Q ss_pred HHHHHHHHhhcceeeeEeecccCCcEEEEecCCCCCcceeeeeeecccccc----------cCCCCcEEEEEEe
Q psy15419 122 EYRKIINRFEHTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSITSY----------YNVNPNYRLYKVA 185 (332)
Q Consensus 122 ~~~~li~~y~~~I~~~f~GH~H~d~f~~~~~~~~~~~~~~~~~~~psvtp~----------~~~nP~~rv~~~d 185 (332)
++.+++.+|+ .|.++|+||+|....... .+ ...+++||++.. ..+-|||+-+.+-
T Consensus 172 ~~~~~l~~~~-~v~~v~~GH~H~~~~~~~---~g-----~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (240)
T cd07402 172 ALAAVLARHP-NVRAILCGHVHRPIDGSW---GG-----IPLLTAPSTCHQFAPDLDDFALDALAPGYRALSLH 236 (240)
T ss_pred HHHHHHhcCC-CeeEEEECCcCchHHeEE---CC-----EEEEEcCcceeeecCCCCcccccccCCCCcEEEEe
Confidence 8999999995 689999999999876543 12 234566665432 2356788877763
No 12
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.25 E-value=1.4e-11 Score=115.80 Aligned_cols=74 Identities=42% Similarity=0.877 Sum_probs=66.5
Q ss_pred EEEEEeeccCCCcCCCCC--cCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHhC---CCEEEEcC
Q psy15419 255 IIQLTDIHYDPKYLAGKT--AHCIAPLCCRVDQPNASSETDRATKYGHYDNCDMPLDVIRSALEQIKKH---KGYLLCSG 329 (332)
Q Consensus 255 Y~~~~~~~~dp~~~~gCd--~~C~~~~~C~~~~~~~~~~~~~a~~~G~~~~Cdsp~~l~~s~~~~i~~~---~~~~~~tg 329 (332)
+++++|.|.||.|..+.+ ..|+...||+... .....+||+||+| .||+|..|+++++++|++. ++||||||
T Consensus 1 ~l~~sDiH~D~~Y~~~~~~~~~C~~~~~~~~~~---~~~~~~~~~~G~~-~CD~p~~l~~s~l~~i~~~~~~~dfii~tG 76 (296)
T cd00842 1 FLHISDIHYDPLYKVGSEYSANCHSPLCCRDES---GDISPPAGPWGDY-GCDSPWRLVESALEAIKKNHPKPDFILWTG 76 (296)
T ss_pred CEEeeccCCCCCCcCCCCCcCCCCCCCccCCCC---CCCCCCCCCCcCc-CCCCcHHHHHHHHHHHHHhCCCCCEEEEcC
Confidence 578999999999999998 8999999999777 3445689999997 6999999999999999985 79999999
Q ss_pred CCC
Q psy15419 330 DAG 332 (332)
Q Consensus 330 D~~ 332 (332)
|++
T Consensus 77 D~v 79 (296)
T cd00842 77 DLV 79 (296)
T ss_pred CCC
Confidence 985
No 13
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=99.20 E-value=2.9e-10 Score=106.40 Aligned_cols=93 Identities=17% Similarity=0.293 Sum_probs=71.6
Q ss_pred CcceEEEecCCEEEEEEcCccccccccccccCCCCchhHHHHHHHHHHHHHhCCC-ceEEEeccCCCCCC-------chH
Q psy15419 46 GGYYSFLTEKNLRIIVLNTNVYQKLNWWNVLYPVDPNDQLSWLASTLLEAEKNNE-KVHILSHIPPGSED-------TMQ 117 (332)
Q Consensus 46 ~GyYs~~~~~~lriI~LNT~~~~~~n~~~~~~~~dp~~Ql~WL~~~L~~a~~~~~-~ViI~~HiPp~~~~-------~~~ 117 (332)
..||+++ .++++||+|||..... .+.....|++||+++|+.+.+++. .+|+++|+|+.... ...
T Consensus 108 ~~~Ysf~-~g~v~fi~Lds~~~~~-------~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~ 179 (294)
T cd00839 108 NLWYSFD-VGPVHFVSLSTEVDFY-------GDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGE 179 (294)
T ss_pred CceEEEe-eCCEEEEEEecccccc-------cCCCCcHHHHHHHHHHHHhcccCCCeEEEEeccCcEecCccccccchhH
Confidence 3489987 6889999999986432 234567999999999998865443 48899999997522 123
Q ss_pred HHHHHHHHHHHHhhcceeeeEeecccCCcEE
Q psy15419 118 VFQREYRKIINRFEHTIAAEFNGHTHYEDIT 148 (332)
Q Consensus 118 ~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~ 148 (332)
...+++.+|+++| .|.++|+||+|..+-.
T Consensus 180 ~~~~~l~~ll~~~--~v~~vl~GH~H~y~r~ 208 (294)
T cd00839 180 KMRAALEDLFYKY--GVDLVLSGHVHAYERT 208 (294)
T ss_pred HHHHHHHHHHHHh--CCCEEEEccceeeEee
Confidence 4567889999999 5889999999987643
No 14
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.03 E-value=1.5e-09 Score=100.10 Aligned_cols=94 Identities=12% Similarity=0.145 Sum_probs=66.9
Q ss_pred cCCEEEEEEcCccccccccccccCCCCchhHHHHHHHHHHHHHhCCCceEEEeccCCCCCC-chHHHHHHHHHHHHHhhc
Q psy15419 54 EKNLRIIVLNTNVYQKLNWWNVLYPVDPNDQLSWLASTLLEAEKNNEKVHILSHIPPGSED-TMQVFQREYRKIINRFEH 132 (332)
Q Consensus 54 ~~~lriI~LNT~~~~~~n~~~~~~~~dp~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~~-~~~~~~~~~~~li~~y~~ 132 (332)
.+++++|+|||..+-.........+.....|++||+++|++++. +++++|++|+|+.... ....-..++.+++++|
T Consensus 121 ~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql~wL~~~L~~~~~-~~~~IV~~HhP~~~~~~~~~~~~~~~~~ll~~~-- 197 (256)
T cd07401 121 FGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLLDRLEKELEKSTN-SNYTIWFGHYPTSTIISPSAKSSSKFKDLLKKY-- 197 (256)
T ss_pred CCCEEEEEEcCccCCCCCCCCceeccCCHHHHHHHHHHHHhccc-CCeEEEEEcccchhccCCCcchhHHHHHHHHhc--
Confidence 47899999999975221111112355668999999999998754 4679999999996421 1111223499999999
Q ss_pred ceeeeEeecccCCcE-EEE
Q psy15419 133 TIAAEFNGHTHYEDI-TIF 150 (332)
Q Consensus 133 ~I~~~f~GH~H~d~f-~~~ 150 (332)
.|.++|+||+|..+. .+.
T Consensus 198 ~v~~vl~GH~H~~~~~~p~ 216 (256)
T cd07401 198 NVTAYLCGHLHPLGGLEPV 216 (256)
T ss_pred CCcEEEeCCccCCCcceee
Confidence 488999999999988 443
No 15
>PLN02533 probable purple acid phosphatase
Probab=98.92 E-value=4.3e-09 Score=103.90 Aligned_cols=86 Identities=21% Similarity=0.353 Sum_probs=65.6
Q ss_pred ceEEEecCCEEEEEEcCccccccccccccCCCCchhHHHHHHHHHHHHHhCCC-ceEEEeccCCCCCC-c------hHHH
Q psy15419 48 YYSFLTEKNLRIIVLNTNVYQKLNWWNVLYPVDPNDQLSWLASTLLEAEKNNE-KVHILSHIPPGSED-T------MQVF 119 (332)
Q Consensus 48 yYs~~~~~~lriI~LNT~~~~~~n~~~~~~~~dp~~Ql~WL~~~L~~a~~~~~-~ViI~~HiPp~~~~-~------~~~~ 119 (332)
||+++ .++++||+|||...+ .....|++||+++|+.+.++.. .+|+++|+|+.... . ....
T Consensus 242 yYSfd-~g~vhfI~Lds~~~~----------~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~ 310 (427)
T PLN02533 242 YYSFN-VYGVHIIMLGSYTDF----------EPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGM 310 (427)
T ss_pred eEEEE-ECCEEEEEEeCCccc----------cCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHH
Confidence 89998 689999999996421 1246999999999998765444 47888999987421 1 1234
Q ss_pred HHHHHHHHHHhhcceeeeEeecccCCc
Q psy15419 120 QREYRKIINRFEHTIAAEFNGHTHYED 146 (332)
Q Consensus 120 ~~~~~~li~~y~~~I~~~f~GH~H~d~ 146 (332)
++++.+|+.+| .|..+|+||+|.-+
T Consensus 311 r~~le~Ll~~~--~VdlvlsGH~H~Ye 335 (427)
T PLN02533 311 KESMETLLYKA--RVDLVFAGHVHAYE 335 (427)
T ss_pred HHHHHHHHHHh--CCcEEEecceeccc
Confidence 56889999998 58999999999754
No 16
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=98.60 E-value=6.4e-07 Score=86.79 Aligned_cols=85 Identities=13% Similarity=0.089 Sum_probs=65.3
Q ss_pred EEEEEEcCccccccccccccCCCCchhHHHHHHHHHHHHHhCCCceEEEeccCCCCCC---chHHHHHHHHHHHHHhhcc
Q psy15419 57 LRIIVLNTNVYQKLNWWNVLYPVDPNDQLSWLASTLLEAEKNNEKVHILSHIPPGSED---TMQVFQREYRKIINRFEHT 133 (332)
Q Consensus 57 lriI~LNT~~~~~~n~~~~~~~~dp~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~~---~~~~~~~~~~~li~~y~~~ 133 (332)
+.+|.|||....... .....+..+++||+++|+.+++....+||+||+|..... ....-..++..|+++| .
T Consensus 175 v~fifiDT~~l~~~~----~~~~~~~~~w~~L~~~L~~a~k~a~WkIVvGHhPIySsG~hg~~~~L~~~L~PLL~ky--~ 248 (394)
T PTZ00422 175 VAFIFIDTWILSSSF----PYKKVSERAWQDLKATLEYAPKIADYIIVVGDKPIYSSGSSKGDSYLSYYLLPLLKDA--Q 248 (394)
T ss_pred EEEEEEECchhcccC----CccccCHHHHHHHHHHHHhhccCCCeEEEEecCceeecCCCCCCHHHHHHHHHHHHHc--C
Confidence 789999998765321 122235689999999998777666799999999998632 1233456899999999 5
Q ss_pred eeeeEeecccCCcE
Q psy15419 134 IAAEFNGHTHYEDI 147 (332)
Q Consensus 134 I~~~f~GH~H~d~f 147 (332)
|.+.|+||.|--+.
T Consensus 249 VdlYisGHDH~lq~ 262 (394)
T PTZ00422 249 VDLYISGYDRNMEV 262 (394)
T ss_pred cCEEEEccccceEE
Confidence 99999999998765
No 17
>KOG1378|consensus
Probab=98.50 E-value=4.4e-07 Score=88.46 Aligned_cols=89 Identities=21% Similarity=0.405 Sum_probs=70.9
Q ss_pred ceEEEecCCEEEEEEcCccccccccccccCCCCchhHHHHHHHHHHHHHhC-CCceEEEeccCCCCCCc--h------HH
Q psy15419 48 YYSFLTEKNLRIIVLNTNVYQKLNWWNVLYPVDPNDQLSWLASTLLEAEKN-NEKVHILSHIPPGSEDT--M------QV 118 (332)
Q Consensus 48 yYs~~~~~~lriI~LNT~~~~~~n~~~~~~~~dp~~Ql~WL~~~L~~a~~~-~~~ViI~~HiPp~~~~~--~------~~ 118 (332)
|||++ .+++++|+|+|-.++ . ......|.+||+++|+.+.++ -..+|+++|.|.+.... . ..
T Consensus 249 ~YSfd-~G~vhfv~lsse~~~--~------~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~ 319 (452)
T KOG1378|consen 249 YYSFD-VGGVHFVVLSTETYY--N------FLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFES 319 (452)
T ss_pred eEEEe-eccEEEEEEeccccc--c------ccccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchh
Confidence 89998 799999999999876 1 222469999999999999876 67899999999986321 1 12
Q ss_pred HHHHHHHHHHHhhcceeeeEeecccCCcE
Q psy15419 119 FQREYRKIINRFEHTIAAEFNGHTHYEDI 147 (332)
Q Consensus 119 ~~~~~~~li~~y~~~I~~~f~GH~H~d~f 147 (332)
....+.+|+-+| .|...|+||.|.-+=
T Consensus 320 ~~~~LE~l~~~~--~VDvvf~GHvH~YER 346 (452)
T KOG1378|consen 320 MREGLEPLFVKY--KVDVVFWGHVHRYER 346 (452)
T ss_pred hHHHHHHHHHHh--ceeEEEeccceehhc
Confidence 235688999999 689999999999764
No 18
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.31 E-value=7.5e-07 Score=81.21 Aligned_cols=62 Identities=19% Similarity=0.331 Sum_probs=48.5
Q ss_pred chhHHHHHHHHHHHHHhCCCceEEEeccCCCCC-----CchHHH--------HHHHHHHHHHhhcceeeeEeecccCCc
Q psy15419 81 PNDQLSWLASTLLEAEKNNEKVHILSHIPPGSE-----DTMQVF--------QREYRKIINRFEHTIAAEFNGHTHYED 146 (332)
Q Consensus 81 p~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~-----~~~~~~--------~~~~~~li~~y~~~I~~~f~GH~H~d~ 146 (332)
...|++||+++|+++. ++++++++|+||... .....| +.++.++|++| .|+.+++||+|...
T Consensus 148 ~~~~l~~l~~~l~~~~--~~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~--~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 148 TAIVLKQLKKQLNQLD--NKQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKY--EIKDVIFGHLHRRF 222 (239)
T ss_pred HHHHHHHHHHHHHhcC--CCCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHh--CCCEEEECCccCCC
Confidence 4688999999998765 578999999999531 011122 36889999998 68999999999985
No 19
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.11 E-value=3.6e-06 Score=74.48 Aligned_cols=72 Identities=18% Similarity=0.159 Sum_probs=51.9
Q ss_pred CCCchhHHHHHHHHHHHHHh---CCCceEEEeccCCCCC---------------C--chHHHHHHHHHHHHHhhcceeee
Q psy15419 78 PVDPNDQLSWLASTLLEAEK---NNEKVHILSHIPPGSE---------------D--TMQVFQREYRKIINRFEHTIAAE 137 (332)
Q Consensus 78 ~~dp~~Ql~WL~~~L~~a~~---~~~~ViI~~HiPp~~~---------------~--~~~~~~~~~~~li~~y~~~I~~~ 137 (332)
+.....|++||+++|.+.++ ....+++++||||... + ....-..++.+++.+++ .|.++
T Consensus 90 g~l~~~ql~wL~~~l~~~~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~-~v~~v 168 (199)
T cd07383 90 DWIRPSQIEWFKETSAALKKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERG-DVKGV 168 (199)
T ss_pred CCCCHHHHHHHHHHHHHHhhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcC-CeEEE
Confidence 34457999999999998752 3478999999998631 1 00012345677777775 79999
Q ss_pred EeecccCCcEEEE
Q psy15419 138 FNGHTHYEDITIF 150 (332)
Q Consensus 138 f~GH~H~d~f~~~ 150 (332)
|+||+|..++...
T Consensus 169 ~~GH~H~~~~~~~ 181 (199)
T cd07383 169 FCGHDHGNDFCGR 181 (199)
T ss_pred EeCCCCCcceecc
Confidence 9999999877644
No 20
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.09 E-value=8.3e-06 Score=70.63 Aligned_cols=84 Identities=15% Similarity=0.123 Sum_probs=57.6
Q ss_pred cCCEEEEEEcCccccccccccccCCCCchhHHHHHHHHHHHHHhCCCceEEEeccCCCC--CCch----HHHHHHHHHHH
Q psy15419 54 EKNLRIIVLNTNVYQKLNWWNVLYPVDPNDQLSWLASTLLEAEKNNEKVHILSHIPPGS--EDTM----QVFQREYRKII 127 (332)
Q Consensus 54 ~~~lriI~LNT~~~~~~n~~~~~~~~dp~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~--~~~~----~~~~~~~~~li 127 (332)
.++++|+.+|+......+. .+.....|++|+ ++|. ...++.+++++|+||.. .+.. ..-.+++.+++
T Consensus 85 ~~~~~~~g~~~~~~~~~~~----~~~~~~~~l~~~-~~l~--~~~~~~~ilv~H~pp~~~~~d~~~~~~~~g~~~l~~li 157 (188)
T cd07392 85 VGGYTFVGIGGSNPTPFNT----PIELSEEEIVSD-GRLN--NLLAKNLILVTHAPPYGTAVDRVSGGFHVGSKAIRKFI 157 (188)
T ss_pred ECCEEEEEeCCCCCCCCCC----ccccCHHHHHHh-hhhh--ccCCCCeEEEECCCCcCCcccccCCCCccCCHHHHHHH
Confidence 4679999999864322111 123356899999 4443 33467899999999953 2211 12357889999
Q ss_pred HHhhcceeeeEeecccCCc
Q psy15419 128 NRFEHTIAAEFNGHTHYED 146 (332)
Q Consensus 128 ~~y~~~I~~~f~GH~H~d~ 146 (332)
+++ .++.+|+||+|...
T Consensus 158 ~~~--~~~~~l~GH~H~~~ 174 (188)
T cd07392 158 EER--QPLLCICGHIHESR 174 (188)
T ss_pred HHh--CCcEEEEecccccc
Confidence 998 47899999999984
No 21
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=98.03 E-value=2.3e-05 Score=71.25 Aligned_cols=63 Identities=22% Similarity=0.318 Sum_probs=49.0
Q ss_pred hhHHHHHHHHHHHHHhCC--CceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCcEEE
Q psy15419 82 NDQLSWLASTLLEAEKNN--EKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYEDITI 149 (332)
Q Consensus 82 ~~Ql~WL~~~L~~a~~~~--~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~~ 149 (332)
..|++||+++|+.+..+. ..+++++|+||...... ..++.++++++ .|..+|+||+|......
T Consensus 145 ~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~~---~~~~~~~~~~~--~v~~vl~GH~H~~~~~~ 209 (232)
T cd07393 145 ERELERLELSLKAAKKREKEKIKIVMLHYPPANENGD---DSPISKLIEEY--GVDICVYGHLHGVGRDR 209 (232)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCCC---HHHHHHHHHHc--CCCEEEECCCCCCcccc
Confidence 579999999999886543 35999999999753321 34678888997 48899999999987644
No 22
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=97.92 E-value=9.3e-05 Score=68.39 Aligned_cols=99 Identities=18% Similarity=0.122 Sum_probs=64.9
Q ss_pred HHHhhh---CcceEEEecCCEEEEEEcCccccccccccccCCCCchhHHHHHHHHHHHHHhCCCceEEEeccCCCCCC--
Q psy15419 40 RQTFLK---GGYYSFLTEKNLRIIVLNTNVYQKLNWWNVLYPVDPNDQLSWLASTLLEAEKNNEKVHILSHIPPGSED-- 114 (332)
Q Consensus 40 ~~~f~~---~GyYs~~~~~~lriI~LNT~~~~~~n~~~~~~~~dp~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~~-- 114 (332)
++.|++ ..+|++. .++++||+|||+...... .+.....|++||+++|+.+. .+.++||++|+|+....
T Consensus 107 ~~rf~~~Fg~~~~~~~-~~~~~fV~Lds~~l~~~~-----~~~~~~~~~~~l~~~l~~~~-~~~p~ILl~H~Plyr~~~~ 179 (257)
T cd08163 107 RQRFEKYFGPTSRVID-VGNHTFVILDTISLSNKD-----DPDVYQPPREFLHSFSAMKV-KSKPRILLTHVPLYRPPNT 179 (257)
T ss_pred HHHHHHHhCCCceEEE-ECCEEEEEEccccccCCc-----ccccchhHHHHHHhhhhccC-CCCcEEEEeccccccCCCC
Confidence 455654 2367776 689999999998643211 23344689999999987543 46789999999987521
Q ss_pred -ch---H-----------HHH-----HHHHHHHHHhhcceeeeEeecccCCcE
Q psy15419 115 -TM---Q-----------VFQ-----REYRKIINRFEHTIAAEFNGHTHYEDI 147 (332)
Q Consensus 115 -~~---~-----------~~~-----~~~~~li~~y~~~I~~~f~GH~H~d~f 147 (332)
|- . .|. +.=..|++.. ..+.+|+||+|..=-
T Consensus 180 ~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~--~P~~vfsGhdH~~C~ 230 (257)
T cd08163 180 SCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAV--QPVIAFSGDDHDYCE 230 (257)
T ss_pred CCCCccccCCCCCCCCCccceeecCHHHHHHHHHhh--CCcEEEecCCCccce
Confidence 11 0 010 1123566666 356899999998643
No 23
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.91 E-value=6.5e-05 Score=69.46 Aligned_cols=85 Identities=22% Similarity=0.278 Sum_probs=62.0
Q ss_pred CCEEEEEEcCccccccccccccCCCCchhHHHHHHHHHHHHHhCC-CceEEEeccCCCCC-Cc----hHHHHHHHHHHHH
Q psy15419 55 KNLRIIVLNTNVYQKLNWWNVLYPVDPNDQLSWLASTLLEAEKNN-EKVHILSHIPPGSE-DT----MQVFQREYRKIIN 128 (332)
Q Consensus 55 ~~lriI~LNT~~~~~~n~~~~~~~~dp~~Ql~WL~~~L~~a~~~~-~~ViI~~HiPp~~~-~~----~~~~~~~~~~li~ 128 (332)
+++++|.|||...... .+.....|++||++.|+.+..++ ..+++++|+|+... .. ......+...++.
T Consensus 103 ~~~~~~~~d~~~~~~~------~G~~~~~q~~~l~~~l~~~~~~~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~ 176 (301)
T COG1409 103 GGWRVIGLDSSVPGVP------LGRLGAEQLDWLEEALAAAPERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLI 176 (301)
T ss_pred CceEEEEecCCCCCCC------CCEECHHHHHHHHHHHHhCccccCceEEEecCCCCCCCCCccceeeeecchhHHHHHH
Confidence 6899999999986532 35567899999999999887542 25666666666542 11 1123467778888
Q ss_pred HhhcceeeeEeecccCC
Q psy15419 129 RFEHTIAAEFNGHTHYE 145 (332)
Q Consensus 129 ~y~~~I~~~f~GH~H~d 145 (332)
+++..|..+|+||.|..
T Consensus 177 ~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 177 AHGNDVRLVLSGHIHLA 193 (301)
T ss_pred hcCCceEEEEeCccccc
Confidence 88633999999999998
No 24
>KOG2679|consensus
Probab=97.79 E-value=0.0002 Score=65.55 Aligned_cols=99 Identities=17% Similarity=0.265 Sum_probs=69.2
Q ss_pred hhHHHHHHHHHHHHHhCCCceEEEeccCCCCCC---chHHHHHHHHHHHHHhhcceeeeEeecccCCcEEEEecCCCCCc
Q psy15419 82 NDQLSWLASTLLEAEKNNEKVHILSHIPPGSED---TMQVFQREYRKIINRFEHTIAAEFNGHTHYEDITIFYDKNNSSR 158 (332)
Q Consensus 82 ~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~~---~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~~~~~~~~~~~ 158 (332)
.+++.||+.+|+++++ +.+||+||+|.-... ....-.+++..|++++ .|-+.++||.|--+..- +.+ .
T Consensus 193 ~~~l~~le~~L~~S~a--~wkiVvGHh~i~S~~~HG~T~eL~~~LlPiL~~n--~VdlY~nGHDHcLQhis--~~e---~ 263 (336)
T KOG2679|consen 193 RALLSWLEVALKASRA--KWKIVVGHHPIKSAGHHGPTKELEKQLLPILEAN--GVDLYINGHDHCLQHIS--SPE---S 263 (336)
T ss_pred HHHHHHHHHHHHHhhc--ceEEEecccceehhhccCChHHHHHHHHHHHHhc--CCcEEEecchhhhhhcc--CCC---C
Confidence 5899999999999885 699999999987532 2345678899999998 69999999999876531 111 3
Q ss_pred ceeeeeeeccccccc------CCCCcEEEEEEeCCee
Q psy15419 159 ATNVAYNGGSITSYY------NVNPNYRLYKVARGTW 189 (332)
Q Consensus 159 ~~~~~~~~psvtp~~------~~nP~~rv~~~d~~t~ 189 (332)
++.++..+.+-.-+. .-+|..--|.||.+.+
T Consensus 264 ~iqf~tSGagSkaw~g~~~~~~~~p~~lkF~YdgqGf 300 (336)
T KOG2679|consen 264 GIQFVTSGAGSKAWRGTDHNPEVNPKELKFYYDGQGF 300 (336)
T ss_pred CeeEEeeCCcccccCCCccCCccChhheEEeeCCCce
Confidence 334333332221121 2367777788887754
No 25
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=97.55 E-value=0.00016 Score=59.58 Aligned_cols=61 Identities=26% Similarity=0.452 Sum_probs=43.6
Q ss_pred hhHHHHHHHHHHHHHhCCCceEEEeccCCCCCCch-------HHHHHHHHHHHHHhhcceeeeEeecccC
Q psy15419 82 NDQLSWLASTLLEAEKNNEKVHILSHIPPGSEDTM-------QVFQREYRKIINRFEHTIAAEFNGHTHY 144 (332)
Q Consensus 82 ~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~~~~-------~~~~~~~~~li~~y~~~I~~~f~GH~H~ 144 (332)
..+..|....+...+.....+||++|+||...... ....+.+..++.++ .|.++|+||+|.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~GH~H~ 199 (200)
T PF00149_consen 132 AQQEWWLWLLLLLEAKNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKY--NVDLVLSGHTHR 199 (200)
T ss_dssp HHHHHHHHHHHHHHEEEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHT--TCSEEEEESSSS
T ss_pred cchhcccccccccccccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhC--CCCEEEeCceec
Confidence 34555555555555556789999999999864321 23456777888887 589999999996
No 26
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=96.97 E-value=0.0048 Score=55.87 Aligned_cols=80 Identities=14% Similarity=0.152 Sum_probs=51.1
Q ss_pred CCEEEEEEcCccccccccccccCCCCchhH----HHHHHHHHHHHH-h-CCCceEEEeccCCCCCCchHHHHHHHHHHHH
Q psy15419 55 KNLRIIVLNTNVYQKLNWWNVLYPVDPNDQ----LSWLASTLLEAE-K-NNEKVHILSHIPPGSEDTMQVFQREYRKIIN 128 (332)
Q Consensus 55 ~~lriI~LNT~~~~~~n~~~~~~~~dp~~Q----l~WL~~~L~~a~-~-~~~~ViI~~HiPp~~~~~~~~~~~~~~~li~ 128 (332)
++++|+.|.....+. .....++ .+||.+.+.+.- + ...+.++++|.||.-......-+..+.++|+
T Consensus 105 g~~~~~GlGGs~~~~--------~e~sE~e~~~~~~~~~~~~l~~~~~~~~~~~VLv~H~PP~g~g~~h~GS~alr~~I~ 176 (224)
T cd07388 105 GPYLVAGVGGEIADE--------GEPEEHEALRYPAWVAEYRLKALWELKDYRKVFLFHTPPYHKGLNEQGSHEVAHLIK 176 (224)
T ss_pred CCeEEEEecCCcCCC--------CCcCHHHHhhhhhhHHHHHHHHHHhCCCCCeEEEECCCCCCCCCCccCHHHHHHHHH
Confidence 558999998655332 1112333 277655332222 1 2568889999999532111345688999999
Q ss_pred HhhcceeeeEeecccC
Q psy15419 129 RFEHTIAAEFNGHTHY 144 (332)
Q Consensus 129 ~y~~~I~~~f~GH~H~ 144 (332)
+|+ .+.+++||+|.
T Consensus 177 ~~~--P~l~i~GHih~ 190 (224)
T cd07388 177 THN--PLVVLVGGKGQ 190 (224)
T ss_pred HhC--CCEEEEcCCce
Confidence 995 66899999993
No 27
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=96.64 E-value=0.044 Score=54.71 Aligned_cols=122 Identities=16% Similarity=0.190 Sum_probs=62.5
Q ss_pred ceEEEecCCEEEEEEcCcccccccccc-----------ccCCCCchhHHHHHHHHHHHHHhCCCceEEEeccCCCCC---
Q psy15419 48 YYSFLTEKNLRIIVLNTNVYQKLNWWN-----------VLYPVDPNDQLSWLASTLLEAEKNNEKVHILSHIPPGSE--- 113 (332)
Q Consensus 48 yYs~~~~~~lriI~LNT~~~~~~n~~~-----------~~~~~dp~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~--- 113 (332)
|+++..-+.+.|++||+-.+-..+... ....-....|++||+++|+.+. ....+|++-+|....
T Consensus 255 y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~s~--a~~kvi~s~v~~~~~~~~ 332 (453)
T PF09423_consen 255 YRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLASSQ--ATWKVIGSSVPFSPLNFP 332 (453)
T ss_dssp -EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH----SSEEEEE-SS--S---SS
T ss_pred EEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhcCC--CcEEEEEeCCceeccccc
Confidence 667774344999999999865532110 0012245799999999999876 344445555554321
Q ss_pred ----------Cc---hHHHHHHHHHHHHHhhcceeeeEeecccCCcEEEEecCCC----CCcceeeeeeeccccc
Q psy15419 114 ----------DT---MQVFQREYRKIINRFEHTIAAEFNGHTHYEDITIFYDKNN----SSRATNVAYNGGSITS 171 (332)
Q Consensus 114 ----------~~---~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~~~~~~~~----~~~~~~~~~~~psvtp 171 (332)
|. ...-+++++++|.+..-.=..+|+|-.|......+..... ......+.|+++||+.
T Consensus 333 ~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~~~~~~~~~~~~~~~~~~~~~~~Ef~~s~vts 407 (453)
T PF09423_consen 333 DAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHASAASRIPPDDADPPDGPGSVGVEFTSSSVTS 407 (453)
T ss_dssp -SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSSEEEEEEESSTT---TTS-EEEEEEE---SST
T ss_pred ccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcchheeeecccccccccCCCCCeEEEEECCCccC
Confidence 11 1122467788887764111369999999998877654431 1124578888888763
No 28
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=96.55 E-value=0.0055 Score=50.84 Aligned_cols=46 Identities=13% Similarity=0.115 Sum_probs=34.6
Q ss_pred EEEeccCCCCCCchHH----HHHHHHHHHHHhhcceeeeEeecccCCcEEEE
Q psy15419 103 HILSHIPPGSEDTMQV----FQREYRKIINRFEHTIAAEFNGHTHYEDITIF 150 (332)
Q Consensus 103 iI~~HiPp~~~~~~~~----~~~~~~~li~~y~~~I~~~f~GH~H~d~f~~~ 150 (332)
++++|+||........ ..+.+.++++++ .+..+++||+|......+
T Consensus 81 iv~~Hhp~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 81 IVVLHHPLVPPPGSGRERLLDAGDALKLLAEA--GVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred EEEecCCCCCCCccccccCCCHHHHHHHHHHc--CCCEEEECCCCCcCeeec
Confidence 7889999986321111 246789999998 588999999999977654
No 29
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=96.47 E-value=0.0026 Score=54.34 Aligned_cols=58 Identities=17% Similarity=0.224 Sum_probs=39.2
Q ss_pred hHHHHHHHHHHHHHhCCCceEEEeccCCCCCC-------chH--HHHHHHHHHHHHhhcceeeeEeecccCCcEE
Q psy15419 83 DQLSWLASTLLEAEKNNEKVHILSHIPPGSED-------TMQ--VFQREYRKIINRFEHTIAAEFNGHTHYEDIT 148 (332)
Q Consensus 83 ~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~~-------~~~--~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~ 148 (332)
..++|+.+.++ ++++|++|+||.... ... ...+.+.++++++ .|..+++||+|.....
T Consensus 86 ~~~~~~~~d~~------~~~vv~~HhpP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~v~~~i~GH~H~~~~~ 152 (166)
T cd07404 86 AAARMRMNDFR------GKTVVVTHHAPSPLSLAPQYGDSLVNAAFAVDLDDLILAD--PIDLWIHGHTHFNFDY 152 (166)
T ss_pred HHHHhCCCCCC------CCEEEEeCCCCCccccCccccCCCcchhhhhccHhHHhhc--CCCEEEECCccccceE
Confidence 45566665554 689999999997521 111 2234466777765 5889999999998543
No 30
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=96.07 E-value=0.0076 Score=52.17 Aligned_cols=45 Identities=22% Similarity=0.383 Sum_probs=35.4
Q ss_pred hCCCceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCc
Q psy15419 97 KNNEKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYED 146 (332)
Q Consensus 97 ~~~~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~ 146 (332)
+...++|++.|.||...+.. ...+.++++++ .|..++|||.|.-.
T Consensus 156 k~~~~fivM~HYPP~s~~~t---~~~~sevlee~--rv~~~lyGHlHgv~ 200 (230)
T COG1768 156 KGVSKFIVMTHYPPFSDDGT---PGPFSEVLEEG--RVSKCLYGHLHGVP 200 (230)
T ss_pred cCcCeEEEEEecCCCCCCCC---CcchHHHHhhc--ceeeEEeeeccCCC
Confidence 34679999999999986533 34677788887 58899999999854
No 31
>KOG1432|consensus
Probab=95.70 E-value=0.043 Score=52.08 Aligned_cols=127 Identities=17% Similarity=0.207 Sum_probs=75.5
Q ss_pred EEEEEEcCccccccccccccCCCCchhHHHHHHHHHHHHHhC-----CCceEEEeccCCCC-----C-Cc----------
Q psy15419 57 LRIIVLNTNVYQKLNWWNVLYPVDPNDQLSWLASTLLEAEKN-----NEKVHILSHIPPGS-----E-DT---------- 115 (332)
Q Consensus 57 lriI~LNT~~~~~~n~~~~~~~~dp~~Ql~WL~~~L~~a~~~-----~~~ViI~~HiPp~~-----~-~~---------- 115 (332)
.-+..|++-.+...+...+.-......|+.||+.+-.+-+.. -++-+++-|||.-- . .+
T Consensus 203 ~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~E~~~ 282 (379)
T KOG1432|consen 203 FNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQEGVS 282 (379)
T ss_pred eeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccCCCcccceeecccc
Confidence 567778887765554332222334579999999887552221 12678899999752 0 01
Q ss_pred hHHHHHHHHHHHH-HhhcceeeeEeecccCCcEEEEecCCCCCcceeeeeeeccccc---ccCCCCcEEEEEEeCCeeE
Q psy15419 116 MQVFQREYRKIIN-RFEHTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSITS---YYNVNPNYRLYKVARGTWE 190 (332)
Q Consensus 116 ~~~~~~~~~~li~-~y~~~I~~~f~GH~H~d~f~~~~~~~~~~~~~~~~~~~psvtp---~~~~nP~~rv~~~d~~t~~ 190 (332)
.......+.+++. |- .|+++|+||.|.++|=....+. +-..+.+++--- ..+-.+..||+++|.....
T Consensus 283 ~~~~~sg~~~~L~~r~--~Vk~vf~GHdHvNDfC~~~k~~-----~wlCygGgaGyggYg~~gw~Rr~Rv~e~d~~~~~ 354 (379)
T KOG1432|consen 283 ASKHNSGFLTTLVNRG--NVKGVFCGHDHVNDFCGELKGE-----LWLCYGGGAGYGGYGIGGWERRARVFELDLNKDR 354 (379)
T ss_pred ccccccHHHHHHHhcc--CcceEEeccccccceecccCCe-----EEEEecCCCccCCcCcCCcccceEEEEccccccc
Confidence 1112345666666 54 6999999999999996544221 222332221100 1234689999999975444
No 32
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=94.18 E-value=0.35 Score=40.05 Aligned_cols=74 Identities=23% Similarity=0.254 Sum_probs=45.7
Q ss_pred CceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCcEEEEecCCCCCcceeeeeeeccccc-ccCCCCc
Q psy15419 100 EKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSITS-YYNVNPN 178 (332)
Q Consensus 100 ~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~~~~~~~~~~~~~~~~~~~psvtp-~~~~nP~ 178 (332)
..-++++|.++...... .+...+++.+. .+..+|+||+|....... .+ ...+..+|++. .....++
T Consensus 81 ~~~i~~~H~~~~~~~~~---~~~~~~~~~~~--~~~~~~~GH~H~~~~~~~---~~-----~~~~~~Gs~~~~~~~~~~~ 147 (156)
T PF12850_consen 81 GFKILLSHGHPYDVQWD---PAELREILSRE--NVDLVLHGHTHRPQVFKI---GG-----IHVINPGSIGGPRHGDQSG 147 (156)
T ss_dssp TEEEEEESSTSSSSTTT---HHHHHHHHHHT--TSSEEEESSSSSEEEEEE---TT-----EEEEEE-GSSS-SSSSSEE
T ss_pred CCeEEEECCCCcccccC---hhhhhhhhccc--CCCEEEcCCcccceEEEE---CC-----EEEEECCcCCCCCCCCCCE
Confidence 56778888877643211 22344556644 688999999999876431 11 33445566654 3344789
Q ss_pred EEEEEEeC
Q psy15419 179 YRLYKVAR 186 (332)
Q Consensus 179 ~rv~~~d~ 186 (332)
|.+++++.
T Consensus 148 ~~i~~~~~ 155 (156)
T PF12850_consen 148 YAILDIED 155 (156)
T ss_dssp EEEEEETT
T ss_pred EEEEEEec
Confidence 99998864
No 33
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=93.90 E-value=0.068 Score=43.92 Aligned_cols=45 Identities=24% Similarity=0.313 Sum_probs=31.3
Q ss_pred eEEEeccCCCCCCc----hHHHHHHHHHHHHHhhcceeeeEeecccCCcEE
Q psy15419 102 VHILSHIPPGSEDT----MQVFQREYRKIINRFEHTIAAEFNGHTHYEDIT 148 (332)
Q Consensus 102 ViI~~HiPp~~~~~----~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~ 148 (332)
-++++|+||..... ...-.+++.+++.++ .+..+|+||+|.....
T Consensus 58 ~Ilv~H~pp~~~~~~~~~~~~g~~~l~~~l~~~--~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 58 DILLTHAPPAGIGDGEDFAHRGFEAFLDFIDRF--RPKLFIHGHTHLNYGY 106 (129)
T ss_pred CEEEECCCCCcCcCcccccccCHHHHHHHHHHH--CCcEEEEcCcCCCcCc
Confidence 37899999864211 112246778888887 4779999999987543
No 34
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=93.81 E-value=0.37 Score=43.37 Aligned_cols=71 Identities=27% Similarity=0.343 Sum_probs=47.9
Q ss_pred EEEeccCCCC--CCc----hHHHHHHHHHHHHHhhcceeeeEeecccCCcEEEEecCCCCCcceeeeeeecccccccCCC
Q psy15419 103 HILSHIPPGS--EDT----MQVFQREYRKIINRFEHTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSITSYYNVN 176 (332)
Q Consensus 103 iI~~HiPp~~--~~~----~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~~~~~~~~~~~~~~~~~~~psvtp~~~~n 176 (332)
|++.|.||.- .|. ...-+...++++++++ ....++||+|...-. +..| ...++.|+- ..-
T Consensus 141 Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefq--P~l~i~GHIHEs~G~---d~iG-----~TivVNPG~----~~~ 206 (226)
T COG2129 141 ILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQ--PLLGLHGHIHESRGI---DKIG-----NTIVVNPGP----LGE 206 (226)
T ss_pred EEEecCCCCCccccCCCCccccchHHHHHHHHHhC--CceEEEeeecccccc---cccC-----CeEEECCCC----ccC
Confidence 8999999974 222 1223678999999995 678999999974321 2222 345667764 123
Q ss_pred CcEEEEEEeCC
Q psy15419 177 PNYRLYKVARG 187 (332)
Q Consensus 177 P~~rv~~~d~~ 187 (332)
..|.+++++..
T Consensus 207 g~yA~i~l~~~ 217 (226)
T COG2129 207 GRYALIELEKE 217 (226)
T ss_pred ceEEEEEecCc
Confidence 67888888765
No 35
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=92.70 E-value=0.31 Score=42.27 Aligned_cols=53 Identities=21% Similarity=0.166 Sum_probs=34.8
Q ss_pred eeeeEeecccCCcEEEEecCCCCCcceeeeeeec-ccccccCCCC-cEEEEEEeCCeeEEeeEE
Q psy15419 134 IAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGG-SITSYYNVNP-NYRLYKVARGTWEVTDFD 195 (332)
Q Consensus 134 I~~~f~GH~H~d~f~~~~~~~~~~~~~~~~~~~p-svtp~~~~nP-~~rv~~~d~~t~~l~d~~ 195 (332)
.-.++|||||...+.... .+.++.| |+|-..+.+| +|.+.+.+.....+..+.
T Consensus 110 ~Dvli~GHTH~p~~~~~~---------~i~~vNPGS~s~pr~~~~~sy~il~~~~~~~~~~~~~ 164 (172)
T COG0622 110 ADVLIFGHTHKPVAEKVG---------GILLVNPGSVSGPRGGNPASYAILDVDNLEVEVLFLE 164 (172)
T ss_pred CCEEEECCCCcccEEEEC---------CEEEEcCCCcCCCCCCCCcEEEEEEcCCCEEEEEEee
Confidence 446899999998776431 2455665 5653333366 999999987765554443
No 36
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=91.58 E-value=0.21 Score=40.94 Aligned_cols=46 Identities=22% Similarity=0.252 Sum_probs=31.8
Q ss_pred CCceEEEeccCCCCC-Cch----HHHHHHHHHHHHHhhcceeeeEeecccCCc
Q psy15419 99 NEKVHILSHIPPGSE-DTM----QVFQREYRKIINRFEHTIAAEFNGHTHYED 146 (332)
Q Consensus 99 ~~~ViI~~HiPp~~~-~~~----~~~~~~~~~li~~y~~~I~~~f~GH~H~d~ 146 (332)
+...++++|.||... +.. ....+.+.++++++. ...+|+||+|...
T Consensus 67 ~~~~ilv~H~~p~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~i~GH~H~~~ 117 (135)
T cd07379 67 EDTDILVTHGPPYGHLDLVSSGQRVGCEELLNRVQRVR--PKLHVFGHIHEGY 117 (135)
T ss_pred CCCEEEEECCCCCcCccccccCcccCCHHHHHHHHHHC--CcEEEEcCcCCcC
Confidence 345568899999642 211 112356788888874 6789999999985
No 37
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=90.94 E-value=1.4 Score=36.64 Aligned_cols=72 Identities=17% Similarity=0.116 Sum_probs=41.3
Q ss_pred CceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCcEEEEecCCCCCcceeeeeeec-ccc-cccCCCC
Q psy15419 100 EKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGG-SIT-SYYNVNP 177 (332)
Q Consensus 100 ~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~~~~~~~~~~~~~~~~~~~p-svt-p~~~~nP 177 (332)
..-++++|-++...... . +. .+++.+. .+..+++||+|....... + ...++.| |++ |.....+
T Consensus 75 g~~i~v~Hg~~~~~~~~-~--~~-~~~~~~~--~~d~vi~GHtH~~~~~~~----~-----~~~~inpGs~~~~~~~~~~ 139 (155)
T cd00841 75 GKRIFLTHGHLYGVKNG-L--DR-LYLAKEG--GADVVLYGHTHIPVIEKI----G-----GVLLLNPGSLSLPRGGGPP 139 (155)
T ss_pred CEEEEEECCcccccccc-h--hh-hhhhhhc--CCCEEEECcccCCccEEE----C-----CEEEEeCCCccCcCCCCCC
Confidence 34567888877532111 1 11 3334443 366899999999865422 1 2344444 554 3324567
Q ss_pred cEEEEEEeC
Q psy15419 178 NYRLYKVAR 186 (332)
Q Consensus 178 ~~rv~~~d~ 186 (332)
+|.++++++
T Consensus 140 ~~~i~~~~~ 148 (155)
T cd00841 140 TYAILEIDD 148 (155)
T ss_pred eEEEEEecC
Confidence 999999885
No 38
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=90.48 E-value=1.6 Score=36.66 Aligned_cols=47 Identities=19% Similarity=0.265 Sum_probs=30.0
Q ss_pred ceeeeEeecccCCcEEEEecCCCCCcceeeeeeec-ccc-cccCCCCcEEEEEEeCCe
Q psy15419 133 TIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGG-SIT-SYYNVNPNYRLYKVARGT 188 (332)
Q Consensus 133 ~I~~~f~GH~H~d~f~~~~~~~~~~~~~~~~~~~p-svt-p~~~~nP~~rv~~~d~~t 188 (332)
.+..+++||+|........ ...++.| |++ |..++.|+|.+++++.+.
T Consensus 106 ~~d~vi~GHtH~~~~~~~~---------~~~~iNpGs~~~~~~~~~~~~~il~~~~~~ 154 (158)
T TIGR00040 106 GVDVLIFGHTHIPVAEELR---------GILLINPGSLTGPRNGNTPSYAILDVDKDK 154 (158)
T ss_pred CCCEEEECCCCCCccEEEC---------CEEEEECCccccccCCCCCeEEEEEecCCe
Confidence 4568999999998665321 1233444 443 444446899999887653
No 39
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=90.42 E-value=0.45 Score=37.33 Aligned_cols=44 Identities=18% Similarity=0.301 Sum_probs=30.4
Q ss_pred EEEeccCCCCCCch-----HHHHHHHHHHHHHhhcceeeeEeecccCCcEE
Q psy15419 103 HILSHIPPGSEDTM-----QVFQREYRKIINRFEHTIAAEFNGHTHYEDIT 148 (332)
Q Consensus 103 iI~~HiPp~~~~~~-----~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~ 148 (332)
++++|.|+...... ......+..++.++ .+..+|+||+|.....
T Consensus 70 i~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~GH~H~~~~~ 118 (131)
T cd00838 70 ILLTHGPPYDPLDELSPDEDPGSEALLELLEKY--GVDLVLSGHTHVYERR 118 (131)
T ss_pred EEEeccCCCCCchhhcccchhhHHHHHHHHHHh--CCCEEEeCCeeccccc
Confidence 57899999863211 11245666777776 5778999999998764
No 40
>KOG4419|consensus
Probab=89.71 E-value=0.86 Score=46.40 Aligned_cols=119 Identities=20% Similarity=0.336 Sum_probs=73.9
Q ss_pred HHHHhhcC-CC-----HHHHHHhhhCc--ceEEEecCCEEEEEEcCccccccccc--cccCCCCchhHHHHHHHHHHHHH
Q psy15419 27 FIQYWGWS-LP-----ESARQTFLKGG--YYSFLTEKNLRIIVLNTNVYQKLNWW--NVLYPVDPNDQLSWLASTLLEAE 96 (332)
Q Consensus 27 l~~~w~~~-l~-----~~~~~~f~~~G--yYs~~~~~~lriI~LNT~~~~~~n~~--~~~~~~dp~~Ql~WL~~~L~~a~ 96 (332)
+...|+.. +- -+..++|..+| |+++....++++...=+......+.. ...-..+-..|.+|-.+.++.
T Consensus 146 f~~~~k~~~la~Nv~~~~~~~~~~p~~~~~~t~~t~~~~~v~~vG~~~~~f~~~~n~~~v~~veei~~~~~~~~m~~~-- 223 (602)
T KOG4419|consen 146 FLPAWKGPYLASNVQIFDSSNSFVPFGLEYATFLTPHGVVVLAVGFLCASFSGAANRTVVVPVEEITQSEWEQDMVNT-- 223 (602)
T ss_pred hhhhhccceeecceEEecCchhhccccccceEEeccCceEEEEEEEeeccccccCCCcccccHHHHhccchHHHHhhc--
Confidence 66677763 21 12235566555 66776555665555433332221110 000112235788999998885
Q ss_pred hCCCceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCcEEEE
Q psy15419 97 KNNEKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYEDITIF 150 (332)
Q Consensus 97 ~~~~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~~~ 150 (332)
.....+|+++|+|....+ +|.-....|...+|++...+|-||.|...|...
T Consensus 224 ~~idlii~lgH~~~~~~~---e~~~~~~~ir~~~p~t~IqviGGHshird~a~~ 274 (602)
T KOG4419|consen 224 TDIDLIIALGHSPVRDDD---EWKSLHAEIRKVHPNTPIQVIGGHSHIRDFAVY 274 (602)
T ss_pred cCccEEEEecccccccch---hhhhHHHHHhhhCCCCceEEECchhhhhhhhhc
Confidence 446788899999987532 454466677788888877899999999988764
No 41
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=89.00 E-value=2 Score=39.84 Aligned_cols=65 Identities=17% Similarity=0.144 Sum_probs=40.9
Q ss_pred CCchhHHHHHHHHHHHHHhCCCceEEEeccCCCCCC-chHHHHHHHHHHHHHhhcceeeeEeecccCCc
Q psy15419 79 VDPNDQLSWLASTLLEAEKNNEKVHILSHIPPGSED-TMQVFQREYRKIINRFEHTIAAEFNGHTHYED 146 (332)
Q Consensus 79 ~dp~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~~-~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~ 146 (332)
.||...+.+..++|++ +.-.-||+++|....... ........-.+|.++.+ .|-.+|.||.|...
T Consensus 166 ~d~~~~~~~~v~~lr~--~~~D~IIvl~H~g~~~~~~~~~~~~~~~~~la~~~~-~vD~IlgGHsH~~~ 231 (277)
T cd07410 166 TDPVETAKKYVPKLRA--EGADVVVVLAHGGFERDLEESLTGENAAYELAEEVP-GIDAILTGHQHRRF 231 (277)
T ss_pred cCHHHHHHHHHHHHHH--cCCCEEEEEecCCcCCCcccccCCccHHHHHHhcCC-CCcEEEeCCCcccc
Confidence 3565666666666664 134678899998765421 11112233456777776 67889999999854
No 42
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=88.42 E-value=1.3 Score=41.49 Aligned_cols=85 Identities=20% Similarity=0.298 Sum_probs=49.8
Q ss_pred CEE--EEEEcCccccccccccccCCCCchhHH--HHHHHHHHHHHhCCCceEEEeccCCCCCCchHHHHHHHHHHHHHhh
Q psy15419 56 NLR--IIVLNTNVYQKLNWWNVLYPVDPNDQL--SWLASTLLEAEKNNEKVHILSHIPPGSEDTMQVFQREYRKIINRFE 131 (332)
Q Consensus 56 ~lr--iI~LNT~~~~~~n~~~~~~~~dp~~Ql--~WL~~~L~~a~~~~~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~ 131 (332)
|+| ||.|-|....... ...-.++.... +|+.++|++ +.-..||+++|...... ..+.+...+|.++++
T Consensus 146 G~kIgiiGltt~~~~~~~---~~~f~d~~~~~~~~~v~~~l~~--~~~DvIIvlsH~G~~~d---~~~~~~~~~la~~~~ 217 (282)
T cd07407 146 GLRVLAFGFLFDFKGAAN---GVTVQPVADVVQEPWFQDAINN--EDVDLILVLGHMPVRDD---AEFKVLHDAIRKIFP 217 (282)
T ss_pred CcEEEEEEEecccccCCC---CcEEcCHHHHHHHHHHHHHHHh--cCCCEEEEEeCCCCCCC---ccHHHHHHHHHHhCC
Confidence 666 6777554321110 11224555545 388888873 23467888999887643 123333345666777
Q ss_pred cceeeeEeecccCCcEE
Q psy15419 132 HTIAAEFNGHTHYEDIT 148 (332)
Q Consensus 132 ~~I~~~f~GH~H~d~f~ 148 (332)
++...++.||+|.....
T Consensus 218 ~id~~Ii~GHsH~~~~~ 234 (282)
T cd07407 218 DTPIQFLGGHSHVRDFT 234 (282)
T ss_pred CCCEEEEeCCcccccce
Confidence 54448999999976443
No 43
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=87.83 E-value=3.3 Score=35.92 Aligned_cols=47 Identities=21% Similarity=0.260 Sum_probs=29.5
Q ss_pred ceeeeEeecccCCcEEEEecCCCCCcceeeeeeec-ccc-c---cc-CCCCcEEEEEEeCCe
Q psy15419 133 TIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGG-SIT-S---YY-NVNPNYRLYKVARGT 188 (332)
Q Consensus 133 ~I~~~f~GH~H~d~f~~~~~~~~~~~~~~~~~~~p-svt-p---~~-~~nP~~rv~~~d~~t 188 (332)
....++|||+|....... . ...++.| |++ | .. ...|+|.+++++.+.
T Consensus 106 ~~dvii~GHTH~p~~~~~---~------g~~viNPGSv~~~~~~~~~~~~~syail~~~~~~ 158 (178)
T cd07394 106 DVDILISGHTHKFEAFEH---E------GKFFINPGSATGAFSPLDPNVIPSFVLMDIQGSK 158 (178)
T ss_pred CCCEEEECCCCcceEEEE---C------CEEEEECCCCCCCCCCCCCCCCCeEEEEEecCCe
Confidence 346899999999866532 1 2344444 565 2 12 235799999987664
No 44
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=85.14 E-value=0.7 Score=42.87 Aligned_cols=38 Identities=24% Similarity=0.337 Sum_probs=28.2
Q ss_pred CCCceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCcEEE
Q psy15419 98 NNEKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYEDITI 149 (332)
Q Consensus 98 ~~~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~~ 149 (332)
++..+|+++|.|-... .+.++ .+-.+|+||||-.++++
T Consensus 181 ~~~~~IlL~H~P~~~~------------~~~~~--~~dL~lsGHTHGGQi~l 218 (271)
T PRK11340 181 ANLPRLVLAHNPDSKE------------VMRDE--PWDLMLCGHTHGGQLRV 218 (271)
T ss_pred CCCCeEEEEcCCChhH------------hhccC--CCCEEEeccccCCeEEc
Confidence 3678999999996531 12233 47789999999999985
No 45
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=82.88 E-value=0.58 Score=41.46 Aligned_cols=51 Identities=22% Similarity=0.307 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHhCCCceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCcEEEE
Q psy15419 85 LSWLASTLLEAEKNNEKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYEDITIF 150 (332)
Q Consensus 85 l~WL~~~L~~a~~~~~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~~~ 150 (332)
.+++...++.. .++..+|+++|.|..... +.+ ..+-.+++||+|..++++.
T Consensus 121 ~~~~~~~~~~~-~~~~~~I~l~H~P~~~~~------------~~~--~~~dl~l~GHtHggqi~~~ 171 (223)
T cd07385 121 RPDLEKALKGL-DEDDPNILLAHQPDTAEE------------AAA--WGVDLQLSGHTHGGQIRLP 171 (223)
T ss_pred CCCHHHHHhCC-CCCCCEEEEecCCChhHH------------hcc--cCccEEEeccCCCCEEecc
Confidence 34566666532 346789999999764211 122 2577899999999998753
No 46
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=82.72 E-value=19 Score=32.44 Aligned_cols=50 Identities=18% Similarity=0.172 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhCCCceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCcE
Q psy15419 87 WLASTLLEAEKNNEKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYEDI 147 (332)
Q Consensus 87 WL~~~L~~a~~~~~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f 147 (332)
-+++..+..+++-.-||+++|-|... . .++.++.+ .|-.+|.||+|....
T Consensus 159 ~~~~~~~~~~~~~D~vIvl~H~g~~~-------~---~~la~~~~-giDlvlggH~H~~~~ 208 (252)
T cd00845 159 AVAVAEELLAEGADVIILLSHLGLDD-------D---EELAEEVP-GIDVILGGHTHHLLE 208 (252)
T ss_pred HHHHHHHHHhCCCCEEEEEeccCccc-------h---HHHHhcCC-CccEEEcCCcCcccC
Confidence 34333333444456788999977653 1 23334444 688899999998643
No 47
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=82.56 E-value=5.3 Score=33.77 Aligned_cols=36 Identities=14% Similarity=0.117 Sum_probs=23.3
Q ss_pred HHHHhhcceeeeEeecccCCcEEEEecCCCCCcceeeeeeecccc
Q psy15419 126 IINRFEHTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSIT 170 (332)
Q Consensus 126 li~~y~~~I~~~f~GH~H~d~f~~~~~~~~~~~~~~~~~~~psvt 170 (332)
++.++. ...+|+||+|..-. +... .+ ...+++||+|
T Consensus 117 ~~~~~~--~~~~l~GH~H~~~~-~~~~-~~-----~~e~~~~~~~ 152 (156)
T cd08165 117 LLQWLK--PRLVLSGHTHSFCE-VTHP-DG-----TPEVTVPSFS 152 (156)
T ss_pred HHHhhC--CCEEEEcccCCCce-eEEE-CC-----EEEEEEecce
Confidence 345553 46799999999533 3221 12 5688899987
No 48
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=82.32 E-value=36 Score=31.18 Aligned_cols=52 Identities=21% Similarity=0.247 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHh--CCCceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCcE
Q psy15419 85 LSWLASTLLEAEK--NNEKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYEDI 147 (332)
Q Consensus 85 l~WL~~~L~~a~~--~~~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f 147 (332)
.+.+++.+.+.++ +-.-||+++|.+.... .++.++.+ .|-.+|.||.|....
T Consensus 168 ~~~~~~~~~~~~~~~~~D~iI~l~H~g~~~~----------~~la~~~~-~iDlilgGH~H~~~~ 221 (264)
T cd07411 168 EEELQEVVVKLRREEGVDVVVLLSHNGLPVD----------VELAERVP-GIDVILSGHTHERTP 221 (264)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEecCCchhh----------HHHHhcCC-CCcEEEeCccccccc
Confidence 4455555444432 3456888899865311 24556666 678899999997543
No 49
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=81.76 E-value=0.64 Score=42.08 Aligned_cols=90 Identities=17% Similarity=0.216 Sum_probs=49.3
Q ss_pred chhHHHHHHHHHHHHHhCCCceEEEeccCC-CCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCcEEEEecCCCCCcc
Q psy15419 81 PNDQLSWLASTLLEAEKNNEKVHILSHIPP-GSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYEDITIFYDKNNSSRA 159 (332)
Q Consensus 81 p~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp-~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~~~~~~~~~~~~ 159 (332)
|.---+|..+.|.+++ .++-|++-|.|| ...+....-++.+.++|++|. -..+++||.|....+-. .|
T Consensus 157 P~weaey~lk~l~elk--~~r~IlLfhtpPd~~kg~~h~GS~~V~dlIk~~~--P~ivl~Ghihe~~~~e~---lG---- 225 (255)
T PF14582_consen 157 PAWEAEYSLKFLRELK--DYRKILLFHTPPDLHKGLIHVGSAAVRDLIKTYN--PDIVLCGHIHESHGKES---LG---- 225 (255)
T ss_dssp EHHHHHHHHGGGGGCT--SSEEEEEESS-BTBCTCTBTTSBHHHHHHHHHH----SEEEE-SSS-EE--EE---ET----
T ss_pred hHHHHHHHHHHHHhcc--cccEEEEEecCCccCCCcccccHHHHHHHHHhcC--CcEEEecccccchhhHH---hC----
Confidence 4434455566666654 567777799999 222222334578999999996 45688899999764321 12
Q ss_pred eeeeeeec-ccccccCCCCcEEEEEEeCC
Q psy15419 160 TNVAYNGG-SITSYYNVNPNYRLYKVARG 187 (332)
Q Consensus 160 ~~~~~~~p-svtp~~~~nP~~rv~~~d~~ 187 (332)
....+.| |++- + .|.++.+...
T Consensus 226 -~TlVVNPGsL~~--G---~yAvI~l~~~ 248 (255)
T PF14582_consen 226 -KTLVVNPGSLAE--G---DYAVIDLEQD 248 (255)
T ss_dssp -TEEEEE--BGGG--T---EEEEEETTTT
T ss_pred -CEEEecCccccc--C---ceeEEEeccc
Confidence 1233444 4442 2 6777666543
No 50
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=81.62 E-value=6.6 Score=36.56 Aligned_cols=53 Identities=17% Similarity=0.166 Sum_probs=36.8
Q ss_pred hHHHHHHHHHHHHHhCC-CceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCc
Q psy15419 83 DQLSWLASTLLEAEKNN-EKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYED 146 (332)
Q Consensus 83 ~Ql~WL~~~L~~a~~~~-~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~ 146 (332)
+..+.++++++++++++ .-||+++|..... -.+|.++.+ .|-.++.||+|...
T Consensus 166 d~~~~~~~~v~~lr~~~~D~II~l~H~G~~~----------d~~la~~~~-giD~IiggH~H~~~ 219 (281)
T cd07409 166 DEIEAAQKEADKLKAQGVNKIIALSHSGYEV----------DKEIARKVP-GVDVIVGGHSHTFL 219 (281)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEeccCchh----------HHHHHHcCC-CCcEEEeCCcCccc
Confidence 34566778787777654 5677788985321 135566665 68899999999963
No 51
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=77.14 E-value=15 Score=33.57 Aligned_cols=52 Identities=15% Similarity=0.233 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHhCC-CceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCcE
Q psy15419 85 LSWLASTLLEAEKNN-EKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYEDI 147 (332)
Q Consensus 85 l~WL~~~L~~a~~~~-~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f 147 (332)
.+-+++.+++.++++ .-|++++|.+... + .+|.++++ .|-.++.||+|....
T Consensus 157 ~~~~~~~v~~~~~~~~D~iVvl~H~g~~~-d---------~~la~~~~-~iD~IlgGH~H~~~~ 209 (257)
T cd07406 157 VETARELVDELREQGADLIIALTHMRLPN-D---------KRLAREVP-EIDLILGGHDHEYIL 209 (257)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEeccCchh-h---------HHHHHhCC-CCceEEecccceeEe
Confidence 444555554444433 4667778886531 1 24567776 688999999998653
No 52
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=74.96 E-value=6.4 Score=35.96 Aligned_cols=89 Identities=9% Similarity=0.092 Sum_probs=45.9
Q ss_pred hhHHHHHHHHHHHHHhCCCceEEEeccCCCC-CC-----chHHHH--------HHHHHHHHHhh--cceeeeEeecccCC
Q psy15419 82 NDQLSWLASTLLEAEKNNEKVHILSHIPPGS-ED-----TMQVFQ--------REYRKIINRFE--HTIAAEFNGHTHYE 145 (332)
Q Consensus 82 ~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~-~~-----~~~~~~--------~~~~~li~~y~--~~I~~~f~GH~H~d 145 (332)
.+-++.+-+.++ ....+++.++++|-+|.- .+ |-..|. ..+.+-|++-. -.+..++|||+|..
T Consensus 130 ~eA~~~ive~~~-~~~~~~~~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l~~fGH~H~~ 208 (238)
T cd07397 130 EESAQRIIAAAK-KAPPDLPLILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPLVVFGHMHHR 208 (238)
T ss_pred HHHHHHHHHHhh-hcCCCCCeEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCEEEeCCccCc
Confidence 345555555554 223467889999999953 11 222221 23433333322 24789999999987
Q ss_pred c--EEEEecCCCCCcceeeeeeecccccc
Q psy15419 146 D--ITIFYDKNNSSRATNVAYNGGSITSY 172 (332)
Q Consensus 146 ~--f~~~~~~~~~~~~~~~~~~~psvtp~ 172 (332)
. ....+..-- ...-+..++.+|..|.
T Consensus 209 l~~~~~~r~~~~-~~~~gt~y~N~a~~pr 236 (238)
T cd07397 209 LRRGKGLRNMIA-VDREGTVYLNAASVPR 236 (238)
T ss_pred ccccccccceee-ecCCCeEEEecccccc
Confidence 1 110000000 0112457777777763
No 53
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=72.13 E-value=49 Score=29.67 Aligned_cols=64 Identities=22% Similarity=0.161 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHhCCCceEEEeccCCCCCCchHHHHHHHH-HHHHHhhcceeeeEeecccCCcEEEEe
Q psy15419 85 LSWLASTLLEAEKNNEKVHILSHIPPGSEDTMQVFQREYR-KIINRFEHTIAAEFNGHTHYEDITIFY 151 (332)
Q Consensus 85 l~WL~~~L~~a~~~~~~ViI~~HiPp~~~~~~~~~~~~~~-~li~~y~~~I~~~f~GH~H~d~f~~~~ 151 (332)
.+-+++.+++++++-.-||+..|..............++. ++++ ..+-+++.||.|.-+-.-++
T Consensus 161 ~~~~~~~i~~lr~~~D~vIv~~H~G~e~~~~p~~~~~~la~~l~~---~G~D~IiG~H~Hv~q~~E~~ 225 (239)
T cd07381 161 LERIAADIAEAKKKADIVIVSLHWGVEYSYYPTPEQRELARALID---AGADLVIGHHPHVLQGIEIY 225 (239)
T ss_pred HHHHHHHHHHHhhcCCEEEEEecCcccCCCCCCHHHHHHHHHHHH---CCCCEEEcCCCCcCCCeEEE
Confidence 4557777777777667888889964432211112223333 3333 26789999999987554333
No 54
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=70.93 E-value=6.3 Score=33.87 Aligned_cols=39 Identities=10% Similarity=0.173 Sum_probs=23.9
Q ss_pred HHHHhhcceeeeEeecccCCcEEEEecCCCCCcceeeeeeecccc
Q psy15419 126 IINRFEHTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSIT 170 (332)
Q Consensus 126 li~~y~~~I~~~f~GH~H~d~f~~~~~~~~~~~~~~~~~~~psvt 170 (332)
++.+. .+..+|+||+|.. ..+...... . ....++.||.|
T Consensus 129 ~~~~~--~~~~~lsGH~H~~-~~~~~~~~~--~-~~~ei~v~S~s 167 (171)
T cd07384 129 LLDTI--KPVLILSGHDHDQ-CEVVHSSKA--G-SVREITVKSFS 167 (171)
T ss_pred HHhcc--CceEEEeCcccCC-eEEEecCCC--C-CceEEeeccch
Confidence 45554 4678999999998 444433211 1 15566777765
No 55
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=70.51 E-value=6.9 Score=34.65 Aligned_cols=41 Identities=22% Similarity=0.447 Sum_probs=31.3
Q ss_pred EEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCcEEEE
Q psy15419 103 HILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYEDITIF 150 (332)
Q Consensus 103 iI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~~~ 150 (332)
++++|+|+.... .....+++.++ .+..+|+||.|.-.....
T Consensus 112 i~lsH~P~~~~~-----~~~~~~~~~~~--~p~~Ifs~H~H~s~~~~~ 152 (195)
T cd08166 112 IMLSHVPLLAEG-----GQALKHVVTDL--DPDLIFSAHRHKSSIFMY 152 (195)
T ss_pred eeeecccccccc-----cHHHHHHHHhc--CceEEEEcCccceeeEEe
Confidence 899999997532 12557788888 577899999999866544
No 56
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=69.94 E-value=26 Score=32.69 Aligned_cols=62 Identities=18% Similarity=0.296 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHhCC-CceEEEeccCCCCCCchHHH---HHHHHHHHHHhhcceeeeEeecccCCc
Q psy15419 85 LSWLASTLLEAEKNN-EKVHILSHIPPGSEDTMQVF---QREYRKIINRFEHTIAAEFNGHTHYED 146 (332)
Q Consensus 85 l~WL~~~L~~a~~~~-~~ViI~~HiPp~~~~~~~~~---~~~~~~li~~y~~~I~~~f~GH~H~d~ 146 (332)
++-+++.++++++++ .-||+++|...........+ ..+..+++.+-...|-.++.||+|...
T Consensus 177 ~e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~~~~~~~~~~~l~~~~~~~iD~IlgGHsH~~~ 242 (288)
T cd07412 177 VEAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDTCSAASGPIADIVNRLDPDVDVVFAGHTHQAY 242 (288)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCccccccChhHHHHHhhcCCCCCEEEeCccCccc
Confidence 445666666666443 46777899876532111000 112344455432368899999999964
No 57
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=67.41 E-value=9.2 Score=34.37 Aligned_cols=27 Identities=26% Similarity=0.486 Sum_probs=20.6
Q ss_pred HHHHHHHHhhcceeeeEeecccCCcEEEE
Q psy15419 122 EYRKIINRFEHTIAAEFNGHTHYEDITIF 150 (332)
Q Consensus 122 ~~~~li~~y~~~I~~~f~GH~H~d~f~~~ 150 (332)
++.++++++ .+..+++||+|+.....+
T Consensus 176 ~~~~~~~~~--~~~~~i~GHtH~~~~~~~ 202 (231)
T TIGR01854 176 EVAAVMRRY--GVDRLIHGHTHRPAIHPL 202 (231)
T ss_pred HHHHHHHHc--CCCEEEECCccCcceeec
Confidence 356667777 477899999999987643
No 58
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=65.92 E-value=6.7 Score=34.36 Aligned_cols=63 Identities=13% Similarity=-0.049 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHHHHhCCCceEEEeccCCCCCCchHHH-HHHHHHHHHHhhcceeeeEeecccCCcEE
Q psy15419 83 DQLSWLASTLLEAEKNNEKVHILSHIPPGSEDTMQVF-QREYRKIINRFEHTIAAEFNGHTHYEDIT 148 (332)
Q Consensus 83 ~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~~~~~~~-~~~~~~li~~y~~~I~~~f~GH~H~d~f~ 148 (332)
.+++++...+... ..+...|+++|.|.........- .......+.. ..+..+++||+|..+..
T Consensus 141 ~~~~~~~~~~~~~-~~~~~~Il~~H~~~~~~~~~~~~~~~~~~~~~~~--~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 141 DLLADAELRPRPL-DPDDFNILLLHGGVAGAGPSDSERAPFVPEALLP--AGFDYVALGHIHRPQII 204 (223)
T ss_pred HHHHHHHHHhhcc-CCCCcEEEEEeeeeecCCCCcccccccCcHhhcC--cCCCEEECCCcccCeee
Confidence 3445544444433 34678899999997532100000 0111122222 25778999999998664
No 59
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=65.89 E-value=35 Score=31.75 Aligned_cols=48 Identities=8% Similarity=0.005 Sum_probs=27.1
Q ss_pred CCceEEEeccCCCCCCchHHHHHHHHHHHHHhh-cceeeeEeecccCCc
Q psy15419 99 NEKVHILSHIPPGSEDTMQVFQREYRKIINRFE-HTIAAEFNGHTHYED 146 (332)
Q Consensus 99 ~~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~-~~I~~~f~GH~H~d~ 146 (332)
-.-||+++|...........-...=.+|.++.. ..|-.++.||+|...
T Consensus 174 ~D~VI~lsH~G~~~~~~~~~~~~~~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 174 PDIVIAATHMGHYDNGEHGSNAPGDVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred CCEEEEEecccccCCccccccCchHHHHHHhcCCCCCCEEEeCCCCccc
Confidence 467888899876432110000011134555541 268889999999953
No 60
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=62.52 E-value=18 Score=36.79 Aligned_cols=123 Identities=14% Similarity=-0.027 Sum_probs=60.2
Q ss_pred CcchHHHHHHHHhhcCCCHHHHHH---hhh--CcceEEEecCCE--EEEEEcCccccccccccccCCCCchhHHHHHHHH
Q psy15419 19 STSWVYESFIQYWGWSLPESARQT---FLK--GGYYSFLTEKNL--RIIVLNTNVYQKLNWWNVLYPVDPNDQLSWLAST 91 (332)
Q Consensus 19 ~~~~l~~~l~~~w~~~l~~~~~~~---f~~--~GyYs~~~~~~l--riI~LNT~~~~~~n~~~~~~~~dp~~Ql~WL~~~ 91 (332)
+.+-+-+.+...-.||+...-... -.. -.|.-++ .+++ .+|.|-+...-.........+-.-....+++++.
T Consensus 117 g~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~-~~g~KIgiIG~~~~~~~~~~~~~~~~~~~f~d~~e~~~~~ 195 (517)
T COG0737 117 GLEALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKE-VGGVKIGIIGLTTPTIPTWEKPNAIEGVTFRDPIEAAKKY 195 (517)
T ss_pred CHHHHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEe-cCCeEEEEEEecCCcccccccccccCCcEEcCHHHHHHHH
Confidence 334455566666666665432111 011 1344444 4554 5688775332111111001111112456777777
Q ss_pred HHHHHhC-CCceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCC
Q psy15419 92 LLEAEKN-NEKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYE 145 (332)
Q Consensus 92 L~~a~~~-~~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d 145 (332)
+.+-+++ =..||+++|.+.........-...-..+.. + .|-.+|.||+|..
T Consensus 196 i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~~~~~~~~--~-~iD~i~~GH~H~~ 247 (517)
T COG0737 196 IPELKGEGVDVIIALSHLGIEDDLELASEVPGDVDVAV--P-GIDLIIGGHSHTV 247 (517)
T ss_pred HHHHHhcCCCEEEEEeccCcCccccccccccccccccc--c-CcceEeccCCccc
Confidence 7776665 467888999988753211000000000001 2 3889999999963
No 61
>PF01784 NIF3: NIF3 (NGG1p interacting factor 3); InterPro: IPR002678 This family contains several NIF3 (NGG1p interacting factor 3) protein homologues. NIF3 interacts with the yeast transcriptional coactivator NGG1p which is part of the ADA complex, the exact function of this interaction is unknown [][].; PDB: 1NMO_F 1NMP_B 2GX8_C 2FYW_B 2NYD_A 3LNL_A 2YYB_A 3RXY_F.
Probab=62.34 E-value=14 Score=33.65 Aligned_cols=53 Identities=19% Similarity=0.209 Sum_probs=31.8
Q ss_pred HHHHHHHhCCCceEEEeccCCCCCCc-----hHHHHHHHHHHHHHhhcceeeeEeecccCCcE
Q psy15419 90 STLLEAEKNNEKVHILSHIPPGSEDT-----MQVFQREYRKIINRFEHTIAAEFNGHTHYEDI 147 (332)
Q Consensus 90 ~~L~~a~~~~~~ViI~~HiPp~~~~~-----~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f 147 (332)
+.+++|.++|-. +|++|||+..... .....+....+++ . .| .+++-||+.|..
T Consensus 44 ~vi~~A~~~~~d-lIItHHP~~f~~~~~~~~~~~~~~~~~~li~-~--~I-~vy~~Ht~lD~~ 101 (241)
T PF01784_consen 44 EVIEEAIEKGAD-LIITHHPLFFKPLKSLTGDDYKGKIIEKLIK-N--GI-SVYSAHTNLDAA 101 (241)
T ss_dssp HHHHHHHHTT-S-EEEESS-SSSSTSSHCHCHSHHHHHHHHHHH-T--T--EEEEESHHHHHS
T ss_pred HHHHHHHHcCCC-EEEEcCchhhcCCccccccchhhHHHHHHHH-C--CC-EEEEeccccccc
Confidence 567778776655 6889999976321 1123344555555 3 34 689999998843
No 62
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=60.99 E-value=33 Score=30.89 Aligned_cols=61 Identities=18% Similarity=0.152 Sum_probs=35.5
Q ss_pred HHHHHHHHHhCCCceEEEeccCCCCCCchHHHHHHH-HHHHHHhhcceeeeEeecccCCcEEEEe
Q psy15419 88 LASTLLEAEKNNEKVHILSHIPPGSEDTMQVFQREY-RKIINRFEHTIAAEFNGHTHYEDITIFY 151 (332)
Q Consensus 88 L~~~L~~a~~~~~~ViI~~HiPp~~~~~~~~~~~~~-~~li~~y~~~I~~~f~GH~H~d~f~~~~ 151 (332)
+.++++++|++-.-||+++|.-.........+..++ .++++ ..|-.++.||.|.-+-.-++
T Consensus 162 i~~~i~~lr~~~D~vIv~~H~G~e~~~~p~~~~~~~A~~l~~---~G~DvIiG~H~H~~~~~e~~ 223 (239)
T smart00854 162 ILADIARARKKADVVIVSLHWGVEYQYEPTDEQRELAHALID---AGADVVIGHHPHVLQPIEIY 223 (239)
T ss_pred HHHHHHHHhccCCEEEEEecCccccCCCCCHHHHHHHHHHHH---cCCCEEEcCCCCcCCceEEE
Confidence 455555666556778889997543221112233333 23333 26889999999987543333
No 63
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=59.87 E-value=42 Score=37.85 Aligned_cols=58 Identities=14% Similarity=0.150 Sum_probs=35.7
Q ss_pred HHHHHHHHHHH--hCCCceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCc
Q psy15419 86 SWLASTLLEAE--KNNEKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYED 146 (332)
Q Consensus 86 ~WL~~~L~~a~--~~~~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~ 146 (332)
+.+++..++.+ +.-..|++++|.......... ..+..+|.++.+ .|-.++.||+|...
T Consensus 824 e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~~--~~~~~~lA~~v~-gIDvIigGHsH~~~ 883 (1163)
T PRK09419 824 EAAKKWVKELKEKEKVDAIIALTHLGSNQDRTTG--EITGLELAKKVK-GVDAIISAHTHTLV 883 (1163)
T ss_pred HHHHHHHHHHHhhcCCCEEEEEecCCcccccccc--ccHHHHHHHhCC-CCCEEEeCCCCccc
Confidence 34444444444 224678888998765321111 223456777776 58899999999864
No 64
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=59.60 E-value=53 Score=29.80 Aligned_cols=66 Identities=21% Similarity=0.182 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHHHHhCCCceEEEeccCCCCCCchHHHHHH-HHHHHHHhhcceeeeEeecccCCcEEEEe
Q psy15419 83 DQLSWLASTLLEAEKNNEKVHILSHIPPGSEDTMQVFQRE-YRKIINRFEHTIAAEFNGHTHYEDITIFY 151 (332)
Q Consensus 83 ~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~~~~~~~~~~-~~~li~~y~~~I~~~f~GH~H~d~f~~~~ 151 (332)
..++.+.+++++++++..-||++.|--.-.......+.++ ..++++. .+-.++.+|.|.-+-.-+|
T Consensus 168 ~~~~~i~~~i~~~r~~~D~vIv~~HwG~e~~~~p~~~q~~~a~~lida---GaDiIiG~HpHv~q~~E~y 234 (250)
T PF09587_consen 168 PGIERIKEDIREARKKADVVIVSLHWGIEYENYPTPEQRELARALIDA---GADIIIGHHPHVIQPVEIY 234 (250)
T ss_pred chHHHHHHHHHHHhcCCCEEEEEeccCCCCCCCCCHHHHHHHHHHHHc---CCCEEEeCCCCcccceEEE
Confidence 4568999999999977788889999732222222233333 4455554 5778999999998765555
No 65
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=58.67 E-value=49 Score=30.50 Aligned_cols=82 Identities=17% Similarity=0.150 Sum_probs=42.9
Q ss_pred cceEEEecCCEEEEEEcCccccccccccccCCCCchhHHHHHHHHHHHHHhCCCceEEEeccCCCCCCchHHHHHHHHHH
Q psy15419 47 GYYSFLTEKNLRIIVLNTNVYQKLNWWNVLYPVDPNDQLSWLASTLLEAEKNNEKVHILSHIPPGSEDTMQVFQREYRKI 126 (332)
Q Consensus 47 GyYs~~~~~~lriI~LNT~~~~~~n~~~~~~~~dp~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~~~~~~~~~~~~~l 126 (332)
||..++ .+|.||=++|=.- . .. .....+|... +++.+++.++.-.-|++.+|.-.-. + . ..+
T Consensus 98 ~~~i~~-~~G~kIaVigl~g--~-~~--~~~~~~P~~~---~~~~v~~lk~~~D~IIV~~H~g~ts-----E-k---~al 159 (255)
T cd07382 98 GYGVVE-VNGKKIAVINLMG--R-VF--MPPLDNPFRA---ADELLEELKEEADIIFVDFHAEATS-----E-K---IAL 159 (255)
T ss_pred CeEEEE-ECCEEEEEEEEec--c-cC--CCcCCCHHHH---HHHHHHHHhcCCCEEEEEECCCCCH-----H-H---HHH
Confidence 565555 4677765555321 1 11 0123345444 4455555544445788889973310 1 1 111
Q ss_pred HHHhhcceeeeEeecccCCc
Q psy15419 127 INRFEHTIAAEFNGHTHYED 146 (332)
Q Consensus 127 i~~y~~~I~~~f~GH~H~d~ 146 (332)
-...+..|-+++-||+|...
T Consensus 160 a~~ldg~VdvIvGtHTHv~t 179 (255)
T cd07382 160 GWYLDGRVSAVVGTHTHVQT 179 (255)
T ss_pred HHhCCCCceEEEeCCCCccC
Confidence 22223358999999999973
No 66
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=57.44 E-value=30 Score=30.61 Aligned_cols=46 Identities=22% Similarity=0.093 Sum_probs=25.9
Q ss_pred hHHHHHHHHhhcCCCHHHHHHh--h-hCcceEEEecCCEEEEEEcCccc
Q psy15419 22 WVYESFIQYWGWSLPESARQTF--L-KGGYYSFLTEKNLRIIVLNTNVY 67 (332)
Q Consensus 22 ~l~~~l~~~w~~~l~~~~~~~f--~-~~GyYs~~~~~~lriI~LNT~~~ 67 (332)
-+.+...+.|..|++......- . .+.|+++..-..+.||+|||-.+
T Consensus 120 ~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~~~lD~R~~ 168 (228)
T cd07389 120 ARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDLILLDTRTY 168 (228)
T ss_pred HHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceEEEEecccc
Confidence 3444555566666554322221 2 33466776433459999999864
No 67
>PRK10799 metal-binding protein; Provisional
Probab=56.99 E-value=16 Score=33.47 Aligned_cols=53 Identities=11% Similarity=0.132 Sum_probs=32.3
Q ss_pred HHHHHHHhCCCceEEEeccCCCCCCc---hHHH-HHHHHHHHHHhhcceeeeEeecccCCcE
Q psy15419 90 STLLEAEKNNEKVHILSHIPPGSEDT---MQVF-QREYRKIINRFEHTIAAEFNGHTHYEDI 147 (332)
Q Consensus 90 ~~L~~a~~~~~~ViI~~HiPp~~~~~---~~~~-~~~~~~li~~y~~~I~~~f~GH~H~d~f 147 (332)
+.+++|.++|-.. |++|||...... .... .+.+..+++. .| .+++-|||.|.-
T Consensus 47 ~vi~~A~~~~~dl-IitHHP~~~~~~~~~~~~~~~~~~~~li~~---~i-~vy~~Htn~D~~ 103 (247)
T PRK10799 47 ALLDEAVRLQADA-VIVHHGYFWKGESPVIRGMKRNRLKTLLAN---DI-NLYGWHLPLDAH 103 (247)
T ss_pred HHHHHHHHCCCCE-EEECCchhccCCCccccchHHHHHHHHHHC---CC-eEEEEecchhhC
Confidence 4567777766666 559999875321 1112 2344444443 33 699999999854
No 68
>PRK09453 phosphodiesterase; Provisional
Probab=56.96 E-value=29 Score=29.78 Aligned_cols=42 Identities=14% Similarity=0.041 Sum_probs=25.0
Q ss_pred eeeeEeecccCCcEEEEecCCCCCcceeeeeeec-ccc-cccCCCCcEEEEEE
Q psy15419 134 IAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGG-SIT-SYYNVNPNYRLYKV 184 (332)
Q Consensus 134 I~~~f~GH~H~d~f~~~~~~~~~~~~~~~~~~~p-svt-p~~~~nP~~rv~~~ 184 (332)
...+++||+|........ ...++.| |++ |.....++|-++++
T Consensus 119 ~d~vi~GHtH~p~~~~~~---------~~~~iNpGs~~~p~~~~~~s~~il~~ 162 (182)
T PRK09453 119 GDVLVYGHTHIPVAEKQG---------GIILFNPGSVSLPKGGYPASYGILDD 162 (182)
T ss_pred CCEEEECCCCCCcceEEC---------CEEEEECCCccccCCCCCCeEEEEEC
Confidence 457999999997654321 2344444 444 33233568877776
No 69
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=54.98 E-value=9.6 Score=33.69 Aligned_cols=33 Identities=21% Similarity=0.149 Sum_probs=23.9
Q ss_pred EEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCcEEEE
Q psy15419 103 HILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYEDITIF 150 (332)
Q Consensus 103 iI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~~~ 150 (332)
|+++|.|... +..+. .+..+|+||+|..+....
T Consensus 129 ilL~H~P~~~-------------~~~~~--~~dl~lSGHtHgGqi~~~ 161 (193)
T cd08164 129 ILLTHVPLYK-------------IFLEG--KPGLILTGHDHEGCDYQH 161 (193)
T ss_pred EEEEccccee-------------ccccC--CCCEEEeCccCCCeEEEe
Confidence 8999999653 11122 467899999999988764
No 70
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=54.86 E-value=13 Score=33.70 Aligned_cols=61 Identities=15% Similarity=0.201 Sum_probs=35.1
Q ss_pred HHHHHHHHHhhcceeeeEeecccCCcEEEEecCCCCCcceeeeeeecccccccCCCCcEEEEEEeCCeeEEee
Q psy15419 121 REYRKIINRFEHTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSITSYYNVNPNYRLYKVARGTWEVTD 193 (332)
Q Consensus 121 ~~~~~li~~y~~~I~~~f~GH~H~d~f~~~~~~~~~~~~~~~~~~~psvtp~~~~nP~~rv~~~d~~t~~l~d 193 (332)
+++.++++++ .+..+++||+|......+.. .+ .+ ..-++-|+ |. ....+++++.+.+.++.
T Consensus 177 ~~~~~~~~~~--~~~~~i~GH~H~~~~~~~~~-~~--~~-~~~~~lgd---w~---~~~~~~~~~~~~~~~~~ 237 (241)
T PRK05340 177 EAVAALMEKH--GVDTLIHGHTHRPAIHQLQA-GG--QP-ATRIVLGD---WH---EQGSVLKVDADGVELIP 237 (241)
T ss_pred HHHHHHHHHh--CCCEEEECcccCcceeeccC-CC--cc-eEEEEeCC---CC---CCCeEEEEECCceEEEe
Confidence 4577888888 47789999999986543321 11 11 11223333 32 12444677777666654
No 71
>PRK10425 DNase TatD; Provisional
Probab=52.80 E-value=32 Score=31.65 Aligned_cols=40 Identities=18% Similarity=0.288 Sum_probs=30.5
Q ss_pred chhHHHHHHHHHHHHHhCCCceEEEeccCCCCCCchHHHHHHHHHHHHHh
Q psy15419 81 PNDQLSWLASTLLEAEKNNEKVHILSHIPPGSEDTMQVFQREYRKIINRF 130 (332)
Q Consensus 81 p~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y 130 (332)
...|.++|+.||+.|++-+.+| +-|.+-. .++..++++++
T Consensus 103 ~~~Q~~vF~~ql~lA~~~~~Pv--~iH~r~a--------~~~~l~iL~~~ 142 (258)
T PRK10425 103 PEEQERAFVAQLAIAAELNMPV--FMHCRDA--------HERFMALLEPW 142 (258)
T ss_pred HHHHHHHHHHHHHHHHHhCCCe--EEEEeCc--------hHHHHHHHHHh
Confidence 4689999999999999887777 4476521 25677888876
No 72
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=52.62 E-value=20 Score=40.33 Aligned_cols=64 Identities=16% Similarity=0.093 Sum_probs=37.1
Q ss_pred CCchhHHHHHHHHHHHHHhCC-CceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCc
Q psy15419 79 VDPNDQLSWLASTLLEAEKNN-EKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYED 146 (332)
Q Consensus 79 ~dp~~Ql~WL~~~L~~a~~~~-~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~ 146 (332)
.|+....+=...+| +++| .-||+++|...............-.+|.++.+ .|-+++.||+|...
T Consensus 217 ~d~v~~~~~~v~~l---k~~gaDvII~l~H~G~~~~~~~~~~en~~~~la~~~~-gID~Il~GHsH~~~ 281 (1163)
T PRK09419 217 KNIVEEANKTIPEM---KKGGADVIVALAHSGIESEYQSSGAEDSVYDLAEKTK-GIDAIVAGHQHGLF 281 (1163)
T ss_pred CCHHHHHHHHHHHH---HhcCCCEEEEEeccCcCCCCCCCCcchHHHHHHHhCC-CCcEEEeCCCcccc
Confidence 34544433333444 3333 56778899876542211111223445666776 69999999999963
No 73
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=52.52 E-value=11 Score=35.31 Aligned_cols=37 Identities=24% Similarity=0.322 Sum_probs=27.0
Q ss_pred CCceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCcEEE
Q psy15419 99 NEKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYEDITI 149 (332)
Q Consensus 99 ~~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~~ 149 (332)
+..+|+.+|-|-.... ++.+ .+-.+++||||-.++++
T Consensus 192 ~~~~IlL~H~P~~~~~------------~~~~--~~dLvLSGHTHGGQi~~ 228 (284)
T COG1408 192 DLPGILLSHEPDIILQ------------LRLY--GVDLVLSGHTHGGQIRL 228 (284)
T ss_pred cccceEeccCCceehh------------hccC--cceEEEeccccCCeEEe
Confidence 4678888888865321 2333 47799999999999984
No 74
>TIGR00486 YbgI_SA1388 dinuclear metal center protein, YbgI/SA1388 family. The characterization of this family of uncharacterized proteins as orthologous is tentative. Members are found in all three domains of life. Several members (from Bacillus subtilis, Listeria monocytogenes, and Mycobacterium tuberculosis - all classified as Firmicutes within the Eubacteria) share a long insert relative to other members.
Probab=52.05 E-value=29 Score=31.75 Aligned_cols=53 Identities=17% Similarity=0.143 Sum_probs=32.2
Q ss_pred HHHHHHHhCCCceEEEeccCCCCCCc----hHHHHHHHHHHHHHhhcceeeeEeecccCCcE
Q psy15419 90 STLLEAEKNNEKVHILSHIPPGSEDT----MQVFQREYRKIINRFEHTIAAEFNGHTHYEDI 147 (332)
Q Consensus 90 ~~L~~a~~~~~~ViI~~HiPp~~~~~----~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f 147 (332)
+.+++|.++|-. +|++|||+..... ......++..+ .+. .| .+++-||..|..
T Consensus 48 ~vi~~Ai~~~~d-lIitHHP~~f~~~~~~~~~~~~~~~~~l-i~~--~I-~vy~~Ht~lD~~ 104 (249)
T TIGR00486 48 SVADEAVRLGAD-LIITHHPLIWKPLKRLIRGIKPGRLKIL-LQN--DI-SLYSAHTNLDAH 104 (249)
T ss_pred HHHHHHHHCCCC-EEEEcCccccCCcccccCCCHHHHHHHH-HHC--CC-eEEEeecchhcC
Confidence 355666655443 5889999976321 12234454444 443 34 699999999854
No 75
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=51.77 E-value=17 Score=33.21 Aligned_cols=25 Identities=24% Similarity=0.296 Sum_probs=19.1
Q ss_pred HHHHHHHhhcceeeeEeecccCCcEEE
Q psy15419 123 YRKIINRFEHTIAAEFNGHTHYEDITI 149 (332)
Q Consensus 123 ~~~li~~y~~~I~~~f~GH~H~d~f~~ 149 (332)
..+.++++ .|.++++||+|+....-
T Consensus 179 v~~~~~~~--~vd~vI~GH~Hr~ai~~ 203 (237)
T COG2908 179 VADEARRH--GVDGVIHGHTHRPAIHN 203 (237)
T ss_pred HHHHHHHc--CCCEEEecCcccHhhcc
Confidence 34555665 68999999999988763
No 76
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=51.22 E-value=24 Score=31.32 Aligned_cols=25 Identities=24% Similarity=0.317 Sum_probs=19.5
Q ss_pred HHHHHHHhhcceeeeEeecccCCcEEE
Q psy15419 123 YRKIINRFEHTIAAEFNGHTHYEDITI 149 (332)
Q Consensus 123 ~~~li~~y~~~I~~~f~GH~H~d~f~~ 149 (332)
..++++++. .+.+++||||......
T Consensus 159 ~~~~l~~~~--~~~iv~GHTh~~~~~~ 183 (208)
T cd07425 159 LDKVLERLG--AKRMVVGHTPQEGGIV 183 (208)
T ss_pred HHHHHHHcC--CCeEEEcCeeeecCce
Confidence 556777774 5789999999987664
No 77
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=49.95 E-value=28 Score=33.06 Aligned_cols=37 Identities=16% Similarity=0.199 Sum_probs=25.4
Q ss_pred CceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCc
Q psy15419 100 EKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYED 146 (332)
Q Consensus 100 ~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~ 146 (332)
..||+++|.-....+ .+|.++.+ .|-.++.||+|...
T Consensus 209 D~II~LsH~g~~~~d---------~~lA~~v~-gIDvIigGHsH~~l 245 (313)
T cd08162 209 NKIILLSHLQQISIE---------QALAALLS-GVDVIIAGGSNTLL 245 (313)
T ss_pred CEEEEEecccccchH---------HHHHhcCC-CCCEEEeCCCCccC
Confidence 567788998311111 35667776 68999999999863
No 78
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=48.57 E-value=71 Score=32.78 Aligned_cols=65 Identities=11% Similarity=0.159 Sum_probs=35.2
Q ss_pred CchhHHHHHHHHHHHHHhCCCceEEEeccCCCCCCchHHHHHHHHHHHHHhh-cceeeeEeecccCC
Q psy15419 80 DPNDQLSWLASTLLEAEKNNEKVHILSHIPPGSEDTMQVFQREYRKIINRFE-HTIAAEFNGHTHYE 145 (332)
Q Consensus 80 dp~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~-~~I~~~f~GH~H~d 145 (332)
||....+=+..+|++. +.-.-||+++|...........-...=.+|.++.+ ..|-.++.||+|..
T Consensus 192 d~~e~a~~~v~~Lk~~-~~~D~IV~LsH~G~~~~~~~~~~~~~d~~la~~~~~~~IDvIlgGHsH~~ 257 (551)
T PRK09558 192 DPAEEAKKVIPELKQT-EKPDVIIALTHMGHYDDGEHGSNAPGDVEMARSLPAGGLDMIVGGHSQDP 257 (551)
T ss_pred CHHHHHHHHHHHHHhc-cCCCEEEEEeccccccCCccCCCCccHHHHHHhCCccCceEEEeCCCCcc
Confidence 4444444444445432 23467888899876321100000011145667765 26889999999985
No 79
>KOG3152|consensus
Probab=47.38 E-value=30 Score=31.83 Aligned_cols=39 Identities=28% Similarity=0.394 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhC--CCceEEEeccCCCCCCchHHHHHHHHHHHHHhh
Q psy15419 87 WLASTLLEAEKN--NEKVHILSHIPPGSEDTMQVFQREYRKIINRFE 131 (332)
Q Consensus 87 WL~~~L~~a~~~--~~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~ 131 (332)
....++..|+++ ..-|+.++||||... ..++.+||.+|.
T Consensus 59 ~k~~~~~~a~~kkrk~GVvylS~IPp~m~------~~rlReil~~yG 99 (278)
T KOG3152|consen 59 KKLTELSEAKAKKRKTGVVYLSNIPPYMD------PVRLREILSQYG 99 (278)
T ss_pred hhhcccchhhhhhccceEEEeccCCCccC------HHHHHHHHHhcc
Confidence 444555444433 668999999999864 246888999996
No 80
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=47.27 E-value=1.3e+02 Score=27.41 Aligned_cols=84 Identities=14% Similarity=0.103 Sum_probs=45.1
Q ss_pred CCceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCcEEEEecCCCCCcceeeeeeecccccccCCCCc
Q psy15419 99 NEKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSITSYYNVNPN 178 (332)
Q Consensus 99 ~~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~~~~~~~~~~~~~~~~~~~psvtp~~~~nP~ 178 (332)
-.-|++++|.+..... ..+.. .+|.++.+ .|-.+|.||+|...-... ...+ ....+.+. .++..=|
T Consensus 172 ~D~iIvl~H~G~~~~~--~~~~~--~~la~~~~-giDvIigGH~H~~~~~~~-~~~~-----~~~ivq~g---~~g~~vg 237 (257)
T cd07408 172 ADVIVALGHLGVDRTS--SPWTS--TELAANVT-GIDLIIDGHSHTTIEIGK-KDGN-----NVLLTQTG---AYLANIG 237 (257)
T ss_pred CCEEEEEeCcCcCCCC--CCccH--HHHHHhCC-CceEEEeCCCcccccCcc-cccC-----CeEEEcCC---hHHceEE
Confidence 3568888998765421 11211 34555665 688999999998643210 0001 11112221 1234455
Q ss_pred EEEEEEeCCeeEEeeEEE
Q psy15419 179 YRLYKVARGTWEVTDFDS 196 (332)
Q Consensus 179 ~rv~~~d~~t~~l~d~~~ 196 (332)
.-.+++++++.+++...|
T Consensus 238 ~l~l~~~~~~~~~~~~~~ 255 (257)
T cd07408 238 EVTLVFDTTTGTIKLISQ 255 (257)
T ss_pred EEEEEEECCCceEEEecc
Confidence 556677777777665543
No 81
>KOG3325|consensus
Probab=46.67 E-value=95 Score=26.44 Aligned_cols=71 Identities=14% Similarity=0.161 Sum_probs=36.9
Q ss_pred HHHHHHHhhcceeeeEeecccCCcEEEEecCCCCCcceeeeee--ecccccccCCCCcEEEEEEeCCeeEEeeEEEEeec
Q psy15419 123 YRKIINRFEHTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYN--GGSITSYYNVNPNYRLYKVARGTWEVTDFDSYTYN 200 (332)
Q Consensus 123 ~~~li~~y~~~I~~~f~GH~H~d~f~~~~~~~~~~~~~~~~~~--~psvtp~~~~nP~~rv~~~d~~t~~l~d~~~y~~d 200 (332)
-..+++|-= .|-..++||||..+-- .-+|. --+++... +++++-....+|+|-+..+...| ++.|.-.+.|
T Consensus 98 sL~~LaRql-dvDILl~G~Th~f~Ay---e~eg~-ffvnPGSaTGAfn~~~t~~~~PSFvLmDiqg~~--~v~YvY~lid 170 (183)
T KOG3325|consen 98 SLALLARQL-DVDILLTGHTHKFEAY---EHEGK-FFVNPGSATGAFNVSDTDIIVPSFVLMDIQGST--VVTYVYRLID 170 (183)
T ss_pred HHHHHHHhc-CCcEEEeCCceeEEEE---EeCCc-EEeCCCcccCCCcccccCCCCCceEEEEecCCE--EEEEEeeeeC
Confidence 345555543 4677999999986542 12221 11111111 22233222368999888877654 5555544443
No 82
>cd02960 AGR Anterior Gradient (AGR) family; members of this family are similar to secreted proteins encoded by the cement gland-specific genes XAG-1 and XAG-2, expressed in the anterior region of dorsal ectoderm of Xenopus. They are implicated in the formation of the cement gland and the induction of forebrain fate. The human homologs, hAG-2 and hAG-3, are secreted proteins associated with estrogen-positive breast tumors. Yeast two-hybrid studies identified the metastasis-associated C4.4a protein and dystroglycan as binding partners, indicating possible roles in the development and progression of breast cancer. hAG-2 has also been implicated in prostate cancer. Its gene was cloned as an androgen-inducible gene and it was shown to be overexpressed in prostate cancer cells at the mRNA and protein levels. AGR proteins contain one conserved cysteine corresponding to the first cysteine in the CXXC motif of TRX. They show high sequence similarity to ERp19.
Probab=46.31 E-value=16 Score=30.18 Aligned_cols=26 Identities=27% Similarity=0.692 Sum_probs=21.7
Q ss_pred hHHHHH---HHHHHHHHhCCCceEEEecc
Q psy15419 83 DQLSWL---ASTLLEAEKNNEKVHILSHI 108 (332)
Q Consensus 83 ~Ql~WL---~~~L~~a~~~~~~ViI~~Hi 108 (332)
+++.|+ ++-|+.|++++++|+|.-|-
T Consensus 4 ~~i~W~~~~eeal~~Ak~~~Kpvmv~f~s 32 (130)
T cd02960 4 DDIIWVQTYEEGLYKAKKSNKPLMVIHHL 32 (130)
T ss_pred ccccchhhHHHHHHHHHHCCCeEEEEEeC
Confidence 467885 78899999999999999664
No 83
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=46.28 E-value=78 Score=32.53 Aligned_cols=53 Identities=23% Similarity=0.273 Sum_probs=31.7
Q ss_pred CchhHHHHHHHHHHHHHhCC-CceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCc
Q psy15419 80 DPNDQLSWLASTLLEAEKNN-EKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYED 146 (332)
Q Consensus 80 dp~~Ql~WL~~~L~~a~~~~-~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~ 146 (332)
|+....+=..++|+ ++| ..||+++|.-.. .=.+|.++.+ .|-.+|.||+|..-
T Consensus 166 d~~~~~~~~v~~Lk---~~g~D~II~lsH~g~~----------~d~~la~~~~-~iD~IigGHsH~~~ 219 (550)
T TIGR01530 166 DEIAAAQIAANALK---QQGINKIILLSHAGFE----------KNCEIAQKIN-DIDVIVSGDSHYLL 219 (550)
T ss_pred CHHHHHHHHHHHHH---hCCCCEEEEEecCCcH----------HHHHHHhcCC-CCCEEEeCCCCccc
Confidence 44333333334444 334 567788997421 1134666666 68899999999953
No 84
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=46.22 E-value=23 Score=35.58 Aligned_cols=119 Identities=18% Similarity=0.131 Sum_probs=69.1
Q ss_pred EEEecCCEEEEEEcCcccc------ccccccc-----cC-CCCchhHHHHHHHHHHHHHhCCCceEEEeccCCCCCC---
Q psy15419 50 SFLTEKNLRIIVLNTNVYQ------KLNWWNV-----LY-PVDPNDQLSWLASTLLEAEKNNEKVHILSHIPPGSED--- 114 (332)
Q Consensus 50 s~~~~~~lriI~LNT~~~~------~~n~~~~-----~~-~~dp~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~~--- 114 (332)
++..-+=+-|.+|||-.|- ..|.... .+ ......|.+||.++|..+++ ..-+|..-+|.+..+
T Consensus 295 ~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~Ska--tWnVia~q~~~~~~~~d~ 372 (522)
T COG3540 295 SFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGASKA--TWNVIAQQMPLGLVVFDG 372 (522)
T ss_pred eeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhhcch--hhhhhhhhcceeEeecCC
Confidence 4432234578999998875 3332110 01 12357999999999998764 355577777776411
Q ss_pred ---------chHHH------HHHHHHHHHHhhcceeeeEeecccCCcEEEEecCCC--CCcceeeeeeecccc
Q psy15419 115 ---------TMQVF------QREYRKIINRFEHTIAAEFNGHTHYEDITIFYDKNN--SSRATNVAYNGGSIT 170 (332)
Q Consensus 115 ---------~~~~~------~~~~~~li~~y~~~I~~~f~GH~H~d~f~~~~~~~~--~~~~~~~~~~~psvt 170 (332)
....| +++++++|+...-.=...|.|-+|..--.-++.+.. ...+....|++.||+
T Consensus 373 ~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~~wA~~l~~d~a~~~~~~~f~Efv~tsi~ 445 (522)
T COG3540 373 SPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHYSWAHDLDPDFAQFEDFAPFWEFVSTSIN 445 (522)
T ss_pred CccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHHHHHhhcCcchhcccccCceeeEeeccCc
Confidence 01122 578889998874111368899888754332221111 123345677777665
No 85
>KOG1432|consensus
Probab=44.63 E-value=46 Score=32.10 Aligned_cols=13 Identities=15% Similarity=0.312 Sum_probs=11.0
Q ss_pred hCCCEEEEcCCCC
Q psy15419 320 KHKGYLLCSGDAG 332 (332)
Q Consensus 320 ~~~~~~~~tgD~~ 332 (332)
+.++||+||||++
T Consensus 99 E~PDlVVfTGD~i 111 (379)
T KOG1432|consen 99 EKPDLVVFTGDNI 111 (379)
T ss_pred cCCCEEEEeCCcc
Confidence 3589999999974
No 86
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]
Probab=42.30 E-value=11 Score=35.33 Aligned_cols=118 Identities=18% Similarity=0.373 Sum_probs=72.1
Q ss_pred CCCcchHHHHHHHH----------hhcCCCHHHHHHhhhCcceEEEecCCEEEEEEcCccccccccccccCCCCchhHHH
Q psy15419 17 PTSTSWVYESFIQY----------WGWSLPESARQTFLKGGYYSFLTEKNLRIIVLNTNVYQKLNWWNVLYPVDPNDQLS 86 (332)
Q Consensus 17 ~~~~~~l~~~l~~~----------w~~~l~~~~~~~f~~~GyYs~~~~~~lriI~LNT~~~~~~n~~~~~~~~dp~~Ql~ 86 (332)
..+-+|+.+++.+. ||+=.|....+.. ...||.+ -++|.++-+.+-.-. .+. + ...-+-
T Consensus 188 ph~~DWyRrElrdyve~~Hr~~vf~Kppvp~atYd~l--~d~ySwd-wgglhlvh~hrf~Gd-~~~-----g--a~sslp 256 (392)
T COG5555 188 PHSLDWYRRELRDYVENYHRSDVFWKPPVPPATYDQL--KDRYSWD-WGGLHLVHYHRFIGD-AEP-----G--ANSSLP 256 (392)
T ss_pred CCchhHHHHHHHHHHHhhcCcCcccCCCCCccccccc--chheecc-ccceeEEEEeeeccc-cCC-----C--ccccCc
Confidence 34668887777765 3332332222221 1345555 467777776655411 111 1 123466
Q ss_pred HHHHHHHHHHhCCCceEEEeccCCCCCCc------------------hH-HH----HHHHHHHHHHhhcceeeeEeeccc
Q psy15419 87 WLASTLLEAEKNNEKVHILSHIPPGSEDT------------------MQ-VF----QREYRKIINRFEHTIAAEFNGHTH 143 (332)
Q Consensus 87 WL~~~L~~a~~~~~~ViI~~HiPp~~~~~------------------~~-~~----~~~~~~li~~y~~~I~~~f~GH~H 143 (332)
||+..|....+.+++|+++.|. |++.. -+ .| +..++..++-| .|.+.|-||-|
T Consensus 257 wlk~dl~~~aadgrpv~Lfqhy--GwdtfsteawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGY--Nvvg~fhGhkh 332 (392)
T COG5555 257 WLKVDLIYSAADGRPVYLFQHY--GWDTFSTEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGY--NVVGTFHGHKH 332 (392)
T ss_pred ceeccceeeccCCCceeehhhh--CccceeccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCc--eeEEecccccc
Confidence 9999999988899999999998 54210 01 12 23566677788 68899999999
Q ss_pred CCcEEE
Q psy15419 144 YEDITI 149 (332)
Q Consensus 144 ~d~f~~ 149 (332)
...+..
T Consensus 333 d~~may 338 (392)
T COG5555 333 DFNMAY 338 (392)
T ss_pred ccceee
Confidence 875544
No 87
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=41.55 E-value=31 Score=31.77 Aligned_cols=26 Identities=19% Similarity=0.401 Sum_probs=20.8
Q ss_pred hHHHHHHHHHHHHh---CCCEEEEcCCCC
Q psy15419 307 PLDVIRSALEQIKK---HKGYLLCSGDAG 332 (332)
Q Consensus 307 p~~l~~s~~~~i~~---~~~~~~~tgD~~ 332 (332)
+...++.+++.|++ +++|+|.|||++
T Consensus 38 ~~~~l~~~i~~i~~~~~~~D~vvitGDl~ 66 (275)
T PRK11148 38 TWESYQAVLEAIRAQQHEFDLIVATGDLA 66 (275)
T ss_pred HHHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 45678888888865 479999999975
No 88
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=41.37 E-value=24 Score=32.67 Aligned_cols=44 Identities=16% Similarity=0.109 Sum_probs=30.3
Q ss_pred CceEEEeccCCCCC-C---ch----------------HHHHHHHHHHHHHhhcceeeeEeecccCC
Q psy15419 100 EKVHILSHIPPGSE-D---TM----------------QVFQREYRKIINRFEHTIAAEFNGHTHYE 145 (332)
Q Consensus 100 ~~ViI~~HiPp~~~-~---~~----------------~~~~~~~~~li~~y~~~I~~~f~GH~H~d 145 (332)
.-=|+++|-||... + .. ..-+..+.+++++. .-+..|+||.|.-
T Consensus 165 ~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~l--kPryhf~gH~H~~ 228 (262)
T cd00844 165 PIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHL--KPRYWFSAHLHVK 228 (262)
T ss_pred CCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHh--CCCEEEEecCCcc
Confidence 44678899999641 1 10 11234567889988 4789999999994
No 89
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=41.24 E-value=33 Score=29.95 Aligned_cols=25 Identities=20% Similarity=0.301 Sum_probs=18.2
Q ss_pred HHHHHHHhhcceeeeEeecccCCcEEE
Q psy15419 123 YRKIINRFEHTIAAEFNGHTHYEDITI 149 (332)
Q Consensus 123 ~~~li~~y~~~I~~~f~GH~H~d~f~~ 149 (332)
..+++.++ .+..+++||+|......
T Consensus 181 ~~~~~~~~--~~~~~i~GH~H~~~~~~ 205 (217)
T cd07398 181 VARLARRK--GVDGVICGHTHRPALHE 205 (217)
T ss_pred HHHHHHhc--CCCEEEECCCCCCCeEE
Confidence 34445555 57889999999997654
No 90
>COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism]
Probab=37.03 E-value=1.7e+02 Score=28.72 Aligned_cols=77 Identities=21% Similarity=0.138 Sum_probs=51.1
Q ss_pred HHHHHhhcCCCHHHHHHhhhCcceEEEecCCEEEEEEcCccccccccccccCCCCc-hhHHHHHHHHHHHHHhCCCceEE
Q psy15419 26 SFIQYWGWSLPESARQTFLKGGYYSFLTEKNLRIIVLNTNVYQKLNWWNVLYPVDP-NDQLSWLASTLLEAEKNNEKVHI 104 (332)
Q Consensus 26 ~l~~~w~~~l~~~~~~~f~~~GyYs~~~~~~lriI~LNT~~~~~~n~~~~~~~~dp-~~Ql~WL~~~L~~a~~~~~~ViI 104 (332)
....-|+.++.++.....++.|+=.+++ .++.-+| ...... ++... ..|+.||.+-.+.|++.|-.|+|
T Consensus 65 ~~~~~w~~~~~~~~~~~ik~~G~n~VRi--Pi~~~~~--~~~~~~------~p~~~~~~~~~~ld~~I~~a~~~gi~V~i 134 (407)
T COG2730 65 LLESHWGNFITEEDFDQIKSAGFNAVRI--PIGYWAL--QATDGD------NPYLIGLTQLKILDEAINWAKKLGIYVLI 134 (407)
T ss_pred cchhccchhhhhhHHHHHHHcCCcEEEc--ccchhhh--hccCCC------CCCeecchHHHHHHHHHHHHHhcCeeEEE
Confidence 3455566666677778888888766653 2222222 111101 22222 57888999999999999999999
Q ss_pred EeccCCCC
Q psy15419 105 LSHIPPGS 112 (332)
Q Consensus 105 ~~HiPp~~ 112 (332)
=.|.+|+.
T Consensus 135 D~H~~~~~ 142 (407)
T COG2730 135 DLHGYPGG 142 (407)
T ss_pred EecccCCC
Confidence 99999974
No 91
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=36.51 E-value=70 Score=29.54 Aligned_cols=42 Identities=21% Similarity=0.139 Sum_probs=31.8
Q ss_pred CchhHHHHHHHHHHHHHhCCCceEEEeccCCCCCCchHHHHHHHHHHHHHhh
Q psy15419 80 DPNDQLSWLASTLLEAEKNNEKVHILSHIPPGSEDTMQVFQREYRKIINRFE 131 (332)
Q Consensus 80 dp~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~ 131 (332)
+...|-+.|+.+|+.|++-+.+|+| |..- -.+.+.+||+++.
T Consensus 106 ~~~~Q~~~F~~ql~lA~~~~lPviI--H~R~--------A~~d~~~iL~~~~ 147 (256)
T COG0084 106 DKERQEEVFEAQLELAKELNLPVII--HTRD--------AHEDTLEILKEEG 147 (256)
T ss_pred cHHHHHHHHHHHHHHHHHcCCCEEE--Eccc--------cHHHHHHHHHhcC
Confidence 3457999999999999998877766 4321 2356888999985
No 92
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=36.22 E-value=47 Score=34.77 Aligned_cols=62 Identities=15% Similarity=0.089 Sum_probs=34.7
Q ss_pred CchhHHHHHHHHHHHHHhCC-CceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCc
Q psy15419 80 DPNDQLSWLASTLLEAEKNN-EKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYED 146 (332)
Q Consensus 80 dp~~Ql~WL~~~L~~a~~~~-~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~ 146 (332)
|+....+=...+|+ ++| ..||+++|......... ...+.-...+++.+ .|-++++||+|..-
T Consensus 179 d~veaa~~~v~~Lr---~~gaDvII~LsH~G~~~d~~~-~~~en~~~~l~~v~-gID~Il~GHsH~~~ 241 (626)
T TIGR01390 179 DIVDTARKYVPEMK---AKGADIIVALAHSGISADPYQ-PGAENSAYYLTKVP-GIDAVLFGHSHAVF 241 (626)
T ss_pred CHHHHHHHHHHHHH---HcCCCEEEEEeccCcCCCccc-cccchHHHHHhcCC-CCCEEEcCCCCccC
Confidence 44443333333444 334 56778899876543111 11122222356665 69999999999963
No 93
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=35.32 E-value=45 Score=28.26 Aligned_cols=35 Identities=20% Similarity=0.161 Sum_probs=21.5
Q ss_pred CCceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCcEE
Q psy15419 99 NEKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYEDIT 148 (332)
Q Consensus 99 ~~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~f~ 148 (332)
+..-++++|.|...... . .....+++||+|.....
T Consensus 106 ~~~~i~l~H~~~~~~~~-------------~--~~~d~vi~GHtH~~~~~ 140 (168)
T cd07390 106 GGRRVYLSHYPILEWNG-------------L--DRGSWNLHGHIHSNSPD 140 (168)
T ss_pred CCEEEEEEeCCcccCCC-------------C--CCCeEEEEeeeCCCCCC
Confidence 34667788976432110 1 13357899999997654
No 94
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=32.14 E-value=1.2e+02 Score=31.88 Aligned_cols=58 Identities=14% Similarity=0.119 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHhCC-CceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCC
Q psy15419 86 SWLASTLLEAEKNN-EKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYE 145 (332)
Q Consensus 86 ~WL~~~L~~a~~~~-~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d 145 (332)
+-+++...+.+++| ..||+++|......... ...+.-...+++.+ .|-+++.||+|..
T Consensus 205 e~a~~~v~~Lk~~gaDvII~LsH~G~~~d~~~-~~aen~~~~l~~v~-gID~Il~GHsH~~ 263 (649)
T PRK09420 205 ETARKYVPEMKEKGADIVVAIPHSGISADPYK-AMAENSVYYLSEVP-GIDAIMFGHSHAV 263 (649)
T ss_pred HHHHHHHHHHHHcCCCEEEEEecCCcCCCCcc-ccccchhHHHhcCC-CCCEEEeCCCCcc
Confidence 33444444444444 56778899876542111 11111112246665 6899999999996
No 95
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A ....
Probab=30.05 E-value=75 Score=28.58 Aligned_cols=32 Identities=22% Similarity=0.136 Sum_probs=28.1
Q ss_pred chhHHHHHHHHHHHHHhCCCceEEEeccCCCC
Q psy15419 81 PNDQLSWLASTLLEAEKNNEKVHILSHIPPGS 112 (332)
Q Consensus 81 p~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~ 112 (332)
...+++-|++.|+.|++.|.+|||-.|..|+.
T Consensus 57 ~~~~~~~ld~~v~~a~~~gi~vild~h~~~~w 88 (281)
T PF00150_consen 57 DETYLARLDRIVDAAQAYGIYVILDLHNAPGW 88 (281)
T ss_dssp THHHHHHHHHHHHHHHHTT-EEEEEEEESTTC
T ss_pred cHHHHHHHHHHHHHHHhCCCeEEEEeccCccc
Confidence 46899999999999999999999999998764
No 96
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=29.46 E-value=81 Score=34.02 Aligned_cols=63 Identities=13% Similarity=0.105 Sum_probs=34.8
Q ss_pred CCchhHHHHHHHHHHHHHhCC-CceEEEeccCCCCCCchHHHHHHHHHHHHHhhcceeeeEeecccCCc
Q psy15419 79 VDPNDQLSWLASTLLEAEKNN-EKVHILSHIPPGSEDTMQVFQREYRKIINRFEHTIAAEFNGHTHYED 146 (332)
Q Consensus 79 ~dp~~Ql~WL~~~L~~a~~~~-~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y~~~I~~~f~GH~H~d~ 146 (332)
.|+....+=...+|+ ++| .-||+++|........... .+.-...+++.+ .|-+++.||+|...
T Consensus 227 ~D~veaa~~~v~~Lr---~~GaDvIIaLsH~G~~~d~~~~~-~ena~~~l~~v~-gID~IlgGHsH~~~ 290 (780)
T PRK09418 227 KDIVETAKKMVPKMK---AEGADVIVALAHSGVDKSGYNVG-MENASYYLTEVP-GVDAVLMGHSHTEV 290 (780)
T ss_pred CCHHHHHHHHHHHHH---hcCCCEEEEEeccCccccccccc-chhhhHHHhcCC-CCCEEEECCCCCcc
Confidence 355444433334444 333 5677889987664321110 111111246665 68999999999864
No 97
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=28.85 E-value=2.6e+02 Score=23.05 Aligned_cols=51 Identities=20% Similarity=0.112 Sum_probs=25.2
Q ss_pred CCEEEEEEcCccccccccccccCCCCchhHHHHHHHHHHHHHhCCCceEEEec
Q psy15419 55 KNLRIIVLNTNVYQKLNWWNVLYPVDPNDQLSWLASTLLEAEKNNEKVHILSH 107 (332)
Q Consensus 55 ~~lriI~LNT~~~~~~n~~~~~~~~dp~~Ql~WL~~~L~~a~~~~~~ViI~~H 107 (332)
.+.++|++|---++.................+.+.+-|+... .++|+|+||
T Consensus 23 ~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~lvG~ 73 (228)
T PF12697_consen 23 RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALG--IKKVILVGH 73 (228)
T ss_dssp TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTT--TSSEEEEEE
T ss_pred CCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccc--ccccccccc
Confidence 356677777654332211000001122344455555554332 379999999
No 98
>cd03240 ABC_Rad50 The catalytic domains of Rad50 are similar to the ATP-binding cassette of ABC transporters, but are not associated with membrane-spanning domains. The conserved ATP-binding motifs common to Rad50 and the ABC transporter family include the Walker A and Walker B motifs, the Q loop, a histidine residue in the switch region, a D-loop, and a conserved LSGG sequence. This conserved sequence, LSGG, is the most specific and characteristic motif of this family and is thus known as the ABC signature sequence.
Probab=26.18 E-value=1.2e+02 Score=26.55 Aligned_cols=23 Identities=22% Similarity=0.260 Sum_probs=13.2
Q ss_pred HHHHHHHHHHhC-CCceEEEeccC
Q psy15419 87 WLASTLLEAEKN-NEKVHILSHIP 109 (332)
Q Consensus 87 WL~~~L~~a~~~-~~~ViI~~HiP 109 (332)
++.+.|.+..++ +..|+|++|.+
T Consensus 160 ~l~~~l~~~~~~~~~~iiiitH~~ 183 (204)
T cd03240 160 SLAEIIEERKSQKNFQLIVITHDE 183 (204)
T ss_pred HHHHHHHHHHhccCCEEEEEEecH
Confidence 666666554433 45666666653
No 99
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=25.31 E-value=1.7e+02 Score=31.72 Aligned_cols=58 Identities=21% Similarity=0.257 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHhCC-CceEEEeccCCCCCCchHHHHHH-HHHHHHHhhcceeeeEeecccCC
Q psy15419 85 LSWLASTLLEAEKNN-EKVHILSHIPPGSEDTMQVFQRE-YRKIINRFEHTIAAEFNGHTHYE 145 (332)
Q Consensus 85 l~WL~~~L~~a~~~~-~~ViI~~HiPp~~~~~~~~~~~~-~~~li~~y~~~I~~~f~GH~H~d 145 (332)
.+-+++...+.|++| ..||+++|.-....... ...+. -.+ |.+-+ .|-+++.||+|..
T Consensus 295 veaa~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~-~~~En~~~~-LA~v~-GIDaIvgGHsH~~ 354 (814)
T PRK11907 295 VEAVRDIIPTMRAAGADIVLVLSHSGIGDDQYE-VGEENVGYQ-IASLS-GVDAVVTGHSHAE 354 (814)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeCCCccccccc-ccccchhhH-HhcCC-CCCEEEECCCCCc
Confidence 344555555555554 46777799876532110 00010 112 33444 6999999999995
No 100
>PF13899 Thioredoxin_7: Thioredoxin-like; PDB: 2LST_A 3PH9_A 1UC7_A 2JU5_A 1VRS_D 2FWG_A 2FWF_A 2FWH_A 2FWE_A 3FK8_A ....
Probab=24.56 E-value=71 Score=23.31 Aligned_cols=22 Identities=23% Similarity=0.166 Sum_probs=18.7
Q ss_pred HHHHHHHHHhCCCceEEEeccC
Q psy15419 88 LASTLLEAEKNNEKVHILSHIP 109 (332)
Q Consensus 88 L~~~L~~a~~~~~~ViI~~HiP 109 (332)
+++-|+.|+++|++|+|.-|-.
T Consensus 6 ~~~al~~A~~~~kpvlv~f~a~ 27 (82)
T PF13899_consen 6 YEEALAEAKKEGKPVLVDFGAD 27 (82)
T ss_dssp HHHHHHHHHHHTSEEEEEEETT
T ss_pred HHHHHHHHHHcCCCEEEEEECC
Confidence 5788999999999999998743
No 101
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=24.06 E-value=91 Score=28.71 Aligned_cols=25 Identities=24% Similarity=0.274 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHh-CCCEEEEcCCCC
Q psy15419 308 LDVIRSALEQIKK-HKGYLLCSGDAG 332 (332)
Q Consensus 308 ~~l~~s~~~~i~~-~~~~~~~tgD~~ 332 (332)
...++.+++.+++ ++++|++|||.+
T Consensus 66 ~~~l~~~v~~i~~~~pDlVli~GD~~ 91 (271)
T PRK11340 66 LSLISDAIALGIEQKPDLILLGGDYV 91 (271)
T ss_pred HHHHHHHHHHHHhcCCCEEEEccCcC
Confidence 3567777777765 689999999974
No 102
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=23.27 E-value=55 Score=27.56 Aligned_cols=43 Identities=9% Similarity=0.038 Sum_probs=29.2
Q ss_pred CceEEEeccCCCC-C--Cc-------hHHHHHHHHHHHHHhhcceeeeEeecccC
Q psy15419 100 EKVHILSHIPPGS-E--DT-------MQVFQREYRKIINRFEHTIAAEFNGHTHY 144 (332)
Q Consensus 100 ~~ViI~~HiPp~~-~--~~-------~~~~~~~~~~li~~y~~~I~~~f~GH~H~ 144 (332)
..-|+++|.||.. . +. ...-+....+++++. ..+.+|+||.|.
T Consensus 69 ~~DILlTh~wP~gi~~~~~~~~~~~~~~~GS~~i~~l~~~l--kPrYhf~gh~~~ 121 (150)
T cd07380 69 GVDILLTSEWPKGISKLSKVPFEETLLICGSDLIAELAKKL--KPRYHFAGLEGV 121 (150)
T ss_pred CCCEEECCCCchhhhhhCCCcccccccCCCCHHHHHHHHHc--CCCeEeecCCCc
Confidence 4578899999943 1 11 112345667778776 477999999887
No 103
>COG3885 Uncharacterized conserved protein [Function unknown]
Probab=22.95 E-value=2.5e+02 Score=25.71 Aligned_cols=32 Identities=28% Similarity=0.460 Sum_probs=24.7
Q ss_pred chHHHHHHHHHHHHHhhcceeeeEe---ecccCCc
Q psy15419 115 TMQVFQREYRKIINRFEHTIAAEFN---GHTHYED 146 (332)
Q Consensus 115 ~~~~~~~~~~~li~~y~~~I~~~f~---GH~H~d~ 146 (332)
.+..+...+.+++++|...|..+++ ||+|...
T Consensus 145 ~l~~Fg~~l~~~le~~~~ki~lIiSaD~aHth~ed 179 (261)
T COG3885 145 ILVKFGDNLGKALEEYERKISLIISADHAHTHDED 179 (261)
T ss_pred HHHHHHHHHHHHHHHhhcceEEEEecccccccCCC
Confidence 3455678889999999988888887 6777653
No 104
>COG4130 Predicted sugar epimerase [Carbohydrate transport and metabolism]
Probab=22.77 E-value=4.6e+02 Score=23.85 Aligned_cols=67 Identities=16% Similarity=0.232 Sum_probs=41.9
Q ss_pred CCEEEEEEcCccccccccccccCCCCchhHHHHHHHHHHHHHhCCCceEEEeccCCCCC--C--c---hHHHHHHHHHHH
Q psy15419 55 KNLRIIVLNTNVYQKLNWWNVLYPVDPNDQLSWLASTLLEAEKNNEKVHILSHIPPGSE--D--T---MQVFQREYRKII 127 (332)
Q Consensus 55 ~~lriI~LNT~~~~~~n~~~~~~~~dp~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~--~--~---~~~~~~~~~~li 127 (332)
-|+.||++|..+ ..|-| ++ +.-+=-+.-+..|++.|-+.+++.-.--|.- + . +..--+++..|+
T Consensus 61 ~Gl~IvSINAly--pFn~w---t~----~~~a~a~~la~yA~acGA~aLvlcPlNd~s~~~~~vr~~~lv~AlkaLkpil 131 (272)
T COG4130 61 AGLTIVSINALY--PFNEW---TE----ERVAEARGLADYAAACGAKALVLCPLNDGSWPGTAVRREDLVEALKALKPIL 131 (272)
T ss_pred cCcEEEEeeccc--ccccc---Ch----HHHHHHHHHHHHHHhcCCceEEEEeccCCCCCCcccchHHHHHHHHHhhHHH
Confidence 478999999887 34433 21 2223334555668888999999876665431 1 1 122336778899
Q ss_pred HHh
Q psy15419 128 NRF 130 (332)
Q Consensus 128 ~~y 130 (332)
++|
T Consensus 132 ~~~ 134 (272)
T COG4130 132 DEY 134 (272)
T ss_pred HHh
Confidence 998
No 105
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=22.73 E-value=3e+02 Score=26.19 Aligned_cols=51 Identities=18% Similarity=0.217 Sum_probs=36.8
Q ss_pred CCCCchhHHHHHHHHHHHHHhCCCceEEEeccCCCCCCchHHHHHHHHHHHHHh
Q psy15419 77 YPVDPNDQLSWLASTLLEAEKNNEKVHILSHIPPGSEDTMQVFQREYRKIINRF 130 (332)
Q Consensus 77 ~~~dp~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~~~~~~~~~~~~~~li~~y 130 (332)
.+.....+++=|.++|+...+++.-|+|.|-+||+... .|..++.+++++.
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~~---d~y~~li~~~~~~ 158 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVPP---DAYAELIRILRQQ 158 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCCH---HHHHHHHHHHHhc
Confidence 44566788888888888856667789999999999742 4445555555554
No 106
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=22.21 E-value=1.4e+02 Score=25.19 Aligned_cols=11 Identities=9% Similarity=0.235 Sum_probs=4.8
Q ss_pred CEEEEEEcCcc
Q psy15419 56 NLRIIVLNTNV 66 (332)
Q Consensus 56 ~lriI~LNT~~ 66 (332)
+.++|++|+..
T Consensus 141 ~~~lvviD~l~ 151 (193)
T PF13481_consen 141 GPDLVVIDPLQ 151 (193)
T ss_dssp --SEEEEE-GG
T ss_pred CCcEEEEcCHH
Confidence 45566666654
No 107
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=21.21 E-value=1.9e+02 Score=24.55 Aligned_cols=31 Identities=19% Similarity=0.155 Sum_probs=18.5
Q ss_pred CCCchhHHHHHHHHHHHHHhCCCceEEEeccC
Q psy15419 78 PVDPNDQLSWLASTLLEAEKNNEKVHILSHIP 109 (332)
Q Consensus 78 ~~dp~~Ql~WL~~~L~~a~~~~~~ViI~~HiP 109 (332)
+-|+ ..-+++.+.|.+.+++|..|+|++|.+
T Consensus 157 ~LD~-~~~~~~~~~l~~~~~~~~tili~sH~~ 187 (190)
T TIGR01166 157 GLDP-AGREQMLAILRRLRAEGMTVVISTHDV 187 (190)
T ss_pred cCCH-HHHHHHHHHHHHHHHcCCEEEEEeecc
Confidence 3344 334566666666555567777777765
No 108
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=20.36 E-value=2.2e+02 Score=24.42 Aligned_cols=26 Identities=19% Similarity=0.116 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHhCCCceEEEeccCC
Q psy15419 85 LSWLASTLLEAEKNNEKVHILSHIPP 110 (332)
Q Consensus 85 l~WL~~~L~~a~~~~~~ViI~~HiPp 110 (332)
-+++.+.|.+..++|..|++++|.+.
T Consensus 163 ~~~l~~~l~~~~~~~~tii~~sH~~~ 188 (198)
T TIGR01189 163 VALLAGLLRAHLARGGIVLLTTHQDL 188 (198)
T ss_pred HHHHHHHHHHHHhCCCEEEEEEcccc
Confidence 44555555544334556666666554
No 109
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=20.28 E-value=2.4e+02 Score=24.17 Aligned_cols=24 Identities=13% Similarity=0.123 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHhCCCceEEEeccC
Q psy15419 86 SWLASTLLEAEKNNEKVHILSHIP 109 (332)
Q Consensus 86 ~WL~~~L~~a~~~~~~ViI~~HiP 109 (332)
.++.+.|++.++++..|+|++|.+
T Consensus 145 ~~l~~~l~~~~~~~~tiiivtH~~ 168 (192)
T cd03232 145 YNIVRFLKKLADSGQAILCTIHQP 168 (192)
T ss_pred HHHHHHHHHHHHcCCEEEEEEcCC
Confidence 344444544433455555555543
No 110
>COG3910 Predicted ATPase [General function prediction only]
Probab=20.04 E-value=1.3e+02 Score=26.96 Aligned_cols=32 Identities=28% Similarity=0.368 Sum_probs=25.1
Q ss_pred CchhHHHHHHHHHHHHHhCCCceEEEeccCCCC
Q psy15419 80 DPNDQLSWLASTLLEAEKNNEKVHILSHIPPGS 112 (332)
Q Consensus 80 dp~~Ql~WL~~~L~~a~~~~~~ViI~~HiPp~~ 112 (332)
-|..||+-|. .|.+..+.|-.+||.+|-|.-.
T Consensus 160 Sp~RQlella-~l~~la~sGaQ~IiATHSPiLl 191 (233)
T COG3910 160 SPSRQLELLA-ILRDLADSGAQIIIATHSPILL 191 (233)
T ss_pred CHHHHHHHHH-HHHHHHhcCCeEEEEecChhhe
Confidence 4679999876 4666666789999999999764
Done!