BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15420
(187 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5PSV4|BRM1L_HUMAN Breast cancer metastasis-suppressor 1-like protein OS=Homo sapiens
GN=BRMS1L PE=1 SV=2
Length = 323
Score = 172 bits (437), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 122/171 (71%), Gaps = 11/171 (6%)
Query: 9 VGLREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQ 68
L++QLY+ER+ +V++KL EV G+A EYL PL LQ+NM+IRT+VA I R+ L +V+
Sbjct: 73 TDLKDQLYKERLSQVDAKLQEVIAGKAPEYLEPLATLQENMQIRTKVAGIYRELCLESVK 132
Query: 69 NQYNAEEQATRQNLENEKSLLYDHMKEELEEKIRRLEEDRNSVDINADLWFFEHNKRGSN 128
N+Y E QA+RQ+ E+EK LLYD ++ ELEEKIRRLEEDR+S+DI ++LW E R
Sbjct: 133 NKYECEIQASRQHCESEKLLLYDTVQSELEEKIRRLEEDRHSIDITSELWNDELQSRKKR 192
Query: 129 QNPLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMS 179
++P S ++K V VSGPYIVYML+D +I+EDWT I+KAM+
Sbjct: 193 KDPFSP-----------DKKKPVVVSGPYIVYMLQDLDILEDWTTIRKAMA 232
>sp|A4FV29|BRM1L_BOVIN Breast cancer metastasis-suppressor 1-like protein OS=Bos taurus
GN=BRMS1L PE=2 SV=1
Length = 323
Score = 172 bits (437), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 122/171 (71%), Gaps = 11/171 (6%)
Query: 9 VGLREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQ 68
L++QLY+ER+ +V++KL EV G+A EYL PL LQ+NM+IRT+VA I R+ L +V+
Sbjct: 73 TDLKDQLYKERLSQVDAKLQEVIAGKAPEYLEPLATLQENMQIRTKVAGIYRELCLESVK 132
Query: 69 NQYNAEEQATRQNLENEKSLLYDHMKEELEEKIRRLEEDRNSVDINADLWFFEHNKRGSN 128
N+Y E QA+RQ+ E+EK LLYD ++ ELEEKIRRLEEDR+S+DI ++LW E R
Sbjct: 133 NKYECEIQASRQHCESEKLLLYDTVQSELEEKIRRLEEDRHSIDITSELWNDELQSRKKR 192
Query: 129 QNPLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMS 179
++P S ++K V VSGPYIVYML+D +I+EDWT I+KAM+
Sbjct: 193 KDPFSP-----------DKKKPVVVSGPYIVYMLQDLDILEDWTTIRKAMA 232
>sp|Q3U1T3|BRM1L_MOUSE Breast cancer metastasis-suppressor 1-like protein OS=Mus musculus
GN=Brms1l PE=2 SV=1
Length = 323
Score = 172 bits (437), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 122/171 (71%), Gaps = 11/171 (6%)
Query: 9 VGLREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQ 68
L++QLY+ER+ +V++KL EV G+A EYL PL LQ+NM+IRT+VA I R+ L +V+
Sbjct: 73 TDLKDQLYKERLSQVDAKLQEVIAGKAPEYLEPLATLQENMQIRTKVAGIYRELCLESVK 132
Query: 69 NQYNAEEQATRQNLENEKSLLYDHMKEELEEKIRRLEEDRNSVDINADLWFFEHNKRGSN 128
N+Y E QA+RQ+ E+EK LLYD ++ ELEEKIRRLEEDR+S+DI ++LW E R
Sbjct: 133 NKYECEIQASRQHCESEKLLLYDTVQSELEEKIRRLEEDRHSIDITSELWNDELQSRKKR 192
Query: 129 QNPLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMS 179
++P S ++K V VSGPYIVYML+D +I+EDWT I+KAM+
Sbjct: 193 KDPFSP-----------DKKKPVVVSGPYIVYMLQDLDILEDWTTIRKAMA 232
>sp|Q5ZLL9|BRM1L_CHICK Breast cancer metastasis-suppressor 1-like protein OS=Gallus gallus
GN=BRMS1L PE=2 SV=1
Length = 323
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 122/169 (72%), Gaps = 11/169 (6%)
Query: 11 LREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQNQ 70
L++QLY+ER+ +V++KL EV G+A EYL PL LQ+NM+IRT+VA I R+ L +V+N+
Sbjct: 73 LKDQLYKERLSQVDAKLQEVIAGKAPEYLEPLAALQENMQIRTKVAGIYRELCLESVKNK 132
Query: 71 YNAEEQATRQNLENEKSLLYDHMKEELEEKIRRLEEDRNSVDINADLWFFEHNKRGSNQN 130
Y E QA+RQ+ E+EK LLYD ++ ELEEKIRRLEEDR+S+DI ++LW E R ++
Sbjct: 133 YECEIQASRQHCESEKLLLYDTVQSELEEKIRRLEEDRHSIDITSELWNDELQSRKKRKD 192
Query: 131 PLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMS 179
P S ++K V VSGPYIVYML+D +I+EDWT I+KAM+
Sbjct: 193 PFSP-----------DKKKPVVVSGPYIVYMLQDLDILEDWTTIRKAMA 230
>sp|Q6AZT4|BRM1L_XENLA Breast cancer metastasis-suppressor 1-like protein OS=Xenopus
laevis GN=brms1l PE=2 SV=1
Length = 322
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 124/171 (72%), Gaps = 10/171 (5%)
Query: 9 VGLREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQ 68
L++QLY+ER+ +V++KL EV+ QA+EYL PL LQ+NM+IRT+VA I R+ L +V+
Sbjct: 71 TDLKDQLYKERLSQVDAKLQEVKADQAQEYLEPLANLQENMQIRTKVAGIYRELCLESVK 130
Query: 69 NQYNAEEQATRQNLENEKSLLYDHMKEELEEKIRRLEEDRNSVDINADLWFFEHNKRGSN 128
N+++ E QA RQ+ E+EK LLYD ++ ELEEKIRRLEEDR+S+DI ++LW E R
Sbjct: 131 NKHDCEIQAARQHCESEKLLLYDTVQSELEEKIRRLEEDRHSIDITSELWNDELQSRRKR 190
Query: 129 QNPLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMS 179
++P S + ++K V VSGPYIVYML+D +I+EDWT I+KAM+
Sbjct: 191 KDPFSPDK----------KKKPVVVSGPYIVYMLQDLDILEDWTTIRKAMA 231
>sp|A4II71|BRM1L_XENTR Breast cancer metastasis-suppressor 1-like protein OS=Xenopus
tropicalis GN=brms1l PE=2 SV=1
Length = 322
Score = 171 bits (433), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 123/169 (72%), Gaps = 10/169 (5%)
Query: 11 LREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQNQ 70
L++QLY+ER+ +V++KL EV G+A EYL PL LQ+NM+IRT+VA I R+ L +V+N+
Sbjct: 73 LKDQLYKERLSQVDAKLQEVIAGKAPEYLEPLANLQENMQIRTKVAGIYRELCLESVKNK 132
Query: 71 YNAEEQATRQNLENEKSLLYDHMKEELEEKIRRLEEDRNSVDINADLWFFEHNKRGSNQN 130
++ E QA RQ+ E+EK LLYD ++ ELEEKIRRLEEDR+S+DI ++LW E R ++
Sbjct: 133 HDCEIQAARQHCESEKLLLYDTVQSELEEKIRRLEEDRHSIDITSELWNDELQSRRKRKD 192
Query: 131 PLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMS 179
P S + ++K V VSGPYIVYML+D +I+EDWT I+KAM+
Sbjct: 193 PFSPDK----------KKKPVVVSGPYIVYMLQDLDILEDWTTIRKAMA 231
>sp|Q4V8V1|BM1LA_DANRE Breast cancer metastasis-suppressor 1-like protein-A OS=Danio rerio
GN=brms1la PE=2 SV=1
Length = 323
Score = 166 bits (420), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 124/172 (72%), Gaps = 11/172 (6%)
Query: 9 VGLREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQ 68
L++QLY+ER+ +V++KL EV G+A EYL PL LQ+NM+IRT+VA I R+ L +V+
Sbjct: 71 TDLKDQLYKERLNQVDAKLQEVMSGKAAEYLEPLATLQENMQIRTKVAGIYRELCLESVK 130
Query: 69 NQYNAEEQATRQNLENEKSLLYDHMKEELEEKIRRLEEDRNSVDINADLWFFE-HNKRGS 127
N+Y+ E QA Q+ E+EK LL+D ++ ELEEKIRRLEEDR+S+DI ++LW E +++
Sbjct: 131 NKYDCETQAAFQHWESEKLLLFDTVQTELEEKIRRLEEDRHSIDITSELWNDELQSRKNK 190
Query: 128 NQNPLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMS 179
++P S + ++K V VSGPYIVYML+D +I+EDWT I+KAM+
Sbjct: 191 KKDPFSPDK----------KKKPVVVSGPYIVYMLQDLDILEDWTAIRKAMA 232
>sp|Q1LZE0|BRMS1_BOVIN Breast cancer metastasis-suppressor 1 homolog OS=Bos taurus
GN=BRMS1 PE=2 SV=1
Length = 246
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 116/169 (68%), Gaps = 12/169 (7%)
Query: 11 LREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQNQ 70
L+E+L+RER+ ++ +L EV +A EY PL LQ +++IR +VA I + + L+ ++N+
Sbjct: 74 LKEKLFRERLSQLRVRLEEVGAERAPEYTEPLGGLQRSLKIRIQVAGIYKGFCLDVIRNK 133
Query: 71 YNAEEQATRQNLENEKSLLYDHMKEELEEKIRRLEEDRNSVDINADLWFFEHNKRGSNQN 130
Y E Q +Q+LE+EK LLYD ++ EL+E+I+RLEEDR S+DI+++ W + + RGS++
Sbjct: 134 YECELQGAKQHLESEKLLLYDTLQGELQERIQRLEEDRQSLDISSEWWDDKLHARGSSRT 193
Query: 131 PLSSKRGPKGFNRMKS--RRKAVTVSGPYIVYMLRDEEIIEDWTIIKKA 177
++ + R+KA VSGPYIVYML++ +I+EDWT IKKA
Sbjct: 194 ----------WDSLPPNKRKKAPLVSGPYIVYMLQEIDILEDWTAIKKA 232
>sp|Q9HCU9|BRMS1_HUMAN Breast cancer metastasis-suppressor 1 OS=Homo sapiens GN=BRMS1 PE=1
SV=1
Length = 246
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 116/171 (67%), Gaps = 16/171 (9%)
Query: 11 LREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQNQ 70
L+E+L+RER+ ++ +L EV +A EY PL LQ +++IR +VA I + + L+ ++N+
Sbjct: 74 LKEKLFRERLSQLRLRLEEVGAERAPEYTEPLGGLQRSLKIRIQVAGIYKGFCLDVIRNK 133
Query: 71 YNAEEQATRQNLENEKSLLYDHMKEELEEKIRRLEEDRNSVDINADLWFFEHNKRGSNQN 130
Y E Q +Q+LE+EK LLYD ++ EL+E+I+RLEEDR S+D++++ W + + RGS+++
Sbjct: 134 YECELQGAKQHLESEKLLLYDTLQGELQERIQRLEEDRQSLDLSSEWWDDKLHARGSSRS 193
Query: 131 ----PLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKA 177
P S R+KA VSGPYIVYML++ +I+EDWT IKKA
Sbjct: 194 WDSLPPS------------KRKKAPLVSGPYIVYMLQEIDILEDWTAIKKA 232
>sp|Q5M7T3|BRMS1_RAT Breast cancer metastasis-suppressor 1 homolog OS=Rattus norvegicus
GN=Brms1 PE=2 SV=1
Length = 246
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 113/167 (67%), Gaps = 8/167 (4%)
Query: 11 LREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQNQ 70
L+E+L+RER+ ++ +L EV +A EY PL LQ +++IR +VA I + + L+ ++N+
Sbjct: 74 LKEKLFRERLSQLRLRLEEVGAERAPEYTEPLGGLQQSLKIRIQVAGIYKGFCLDVIRNK 133
Query: 71 YNAEEQATRQNLENEKSLLYDHMKEELEEKIRRLEEDRNSVDINADLWFFEHNKRGSNQN 130
Y E Q +Q+LE+EK LLYD + EL+E+I+RLEEDR S+DI+++ W + + RGS++
Sbjct: 134 YECELQGAKQHLESEKLLLYDTLLGELQERIQRLEEDRQSLDISSEWWDDKLHSRGSSKT 193
Query: 131 PLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKA 177
S R+KA VSGPYIVYML++ +I+EDWT IKKA
Sbjct: 194 WDSVP--------PSKRKKAPLVSGPYIVYMLQEIDILEDWTAIKKA 232
>sp|Q99N20|BRMS1_MOUSE Breast cancer metastasis-suppressor 1 homolog OS=Mus musculus
GN=Brms1 PE=2 SV=1
Length = 246
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 112/169 (66%), Gaps = 12/169 (7%)
Query: 11 LREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQNQ 70
L+E+L+RER+ ++ +L EV +A EY PL LQ +++IR +VA I + + L+ ++N+
Sbjct: 74 LKEKLFRERLSQLRLRLEEVGAERAPEYTEPLGGLQQSLKIRIQVAGIYKGFCLDVIRNK 133
Query: 71 YNAEEQATRQNLENEKSLLYDHMKEELEEKIRRLEEDRNSVDINADLWFFEHNKRGSNQN 130
Y E Q +Q+LE+EK LLYD + EL+E+I+RLEEDR S+DI+++ W +
Sbjct: 134 YECELQGAKQHLESEKMLLYDTLLGELQERIQRLEEDRQSLDISSEWW----------DD 183
Query: 131 PLSSKRGPKGFNRM--KSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKA 177
L S+ K + M R+KA VSGPYIVYML++ +I+EDWT IKKA
Sbjct: 184 KLHSRSSSKAGDAMPPSKRKKAPLVSGPYIVYMLQEIDILEDWTAIKKA 232
>sp|Q8BR65|SDS3_MOUSE Sin3 histone deacetylase corepressor complex component SDS3 OS=Mus
musculus GN=Suds3 PE=1 SV=1
Length = 328
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 90/183 (49%), Gaps = 26/183 (14%)
Query: 9 VGLREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQ 68
V ++EQ+Y++++ ++ +L +++ G +EY ++KL R R A + Q + V+
Sbjct: 66 VEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYRERIRNAELFLQLETEQVE 125
Query: 69 NQYNAEEQATRQNLENEKSLLYDHMKEELEEKIRRLEEDRNSVDINAD------LWFFEH 122
Y E++A + E++K L +++ ELEEK + +E ++ ++++ D + +
Sbjct: 126 RNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKL 185
Query: 123 NKRGSNQNPLSSKR---GPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMS 179
+R ++ P+ KR P N Y+L DE+I+ED + K S
Sbjct: 186 RRRPNDPVPIPDKRRKPAPAQLN-----------------YLLTDEQIMEDLRTLNKLKS 228
Query: 180 QRK 182
++
Sbjct: 229 PKR 231
>sp|A6H6W9|SDS3_BOVIN Sin3 histone deacetylase corepressor complex component SDS3 OS=Bos
taurus GN=SUDS3 PE=2 SV=1
Length = 328
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 91/180 (50%), Gaps = 20/180 (11%)
Query: 9 VGLREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQ 68
V ++EQ+Y++++ ++ +L +++ G +EY ++KL + R A + Q + V+
Sbjct: 66 VEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERIRNAELFLQLETEQVE 125
Query: 69 NQYNAEEQATRQNLENEKSLLYDHMKEELEEKIRRLEEDRNSVDINAD------LWFFEH 122
Y E++A + E++K L +++ ELEEK + +E ++ ++++ D + +
Sbjct: 126 RNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKL 185
Query: 123 NKRGSNQNPLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMSQRK 182
+R ++ P+ K RRK + Y+L DE+I+ED + K S ++
Sbjct: 186 RRRPNDPVPIPDK-----------RRKPAPAQ---LNYLLTDEQIMEDLRTLNKLKSPKR 231
>sp|Q5RBB8|SDS3_PONAB Sin3 histone deacetylase corepressor complex component SDS3
OS=Pongo abelii GN=SUDS3 PE=2 SV=1
Length = 328
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 91/180 (50%), Gaps = 20/180 (11%)
Query: 9 VGLREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQ 68
V ++EQ+Y++++ ++ +L +++ G +EY ++KL + R A + Q + V+
Sbjct: 66 VEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERIRNAELFLQLETEQVE 125
Query: 69 NQYNAEEQATRQNLENEKSLLYDHMKEELEEKIRRLEEDRNSVDINAD------LWFFEH 122
Y E++A + E++K L +++ ELEEK + +E ++ ++++ D + +
Sbjct: 126 RNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKL 185
Query: 123 NKRGSNQNPLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMSQRK 182
+R ++ P+ K RRK + Y+L DE+I+ED + K S ++
Sbjct: 186 RRRPNDPVPIPDK-----------RRKPAPAQ---LNYLLTDEQIMEDLRTLNKLKSPKR 231
>sp|Q9H7L9|SDS3_HUMAN Sin3 histone deacetylase corepressor complex component SDS3 OS=Homo
sapiens GN=SUDS3 PE=1 SV=2
Length = 328
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 91/180 (50%), Gaps = 20/180 (11%)
Query: 9 VGLREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQ 68
V ++EQ+Y++++ ++ +L +++ G +EY ++KL + R A + Q + V+
Sbjct: 66 VEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERIRNAELFLQLETEQVE 125
Query: 69 NQYNAEEQATRQNLENEKSLLYDHMKEELEEKIRRLEEDRNSVDINAD------LWFFEH 122
Y E++A + E++K L +++ ELEEK + +E ++ ++++ D + +
Sbjct: 126 RNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKL 185
Query: 123 NKRGSNQNPLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMSQRK 182
+R ++ P+ K RRK + Y+L DE+I+ED + K S ++
Sbjct: 186 RRRPNDPVPIPDK-----------RRKPAPAQ---LNYLLTDEQIMEDLRTLNKLKSPKR 231
>sp|Q6NRG6|SAS6_XENLA Spindle assembly abnormal protein 6 homolog OS=Xenopus laevis
GN=sas6 PE=2 SV=1
Length = 668
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 64/122 (52%), Gaps = 18/122 (14%)
Query: 42 LQKLQDNMR-----IRTEVAAILRQYKLNNVQNQYNAEEQATRQNLEN-----EKSLLYD 91
++KLQ +M+ I+ + A ++Q KL + Q +E+ N+++ E+ +L
Sbjct: 391 IKKLQTDMKKLMEKIKLKNAVTMQQEKLLGEKEQTLQKEKLELTNVKHLLKIKEEEML-- 448
Query: 92 HMKEELEEKIRRLEEDRNSVDINADL--WFFEHNKRGSNQNPLSSKRGPKGFNRMKSRRK 149
+KE+L+ +LEE + + N ++ W NK+ N+N +++ +GP G + M S K
Sbjct: 449 KLKEQLDSTTEKLEESKQQLKTNENVIAWL---NKQ-LNENKIATLQGPHGLHEMPSSLK 504
Query: 150 AV 151
V
Sbjct: 505 TV 506
>sp|A7TES0|MDM34_VANPO Mitochondrial distribution and morphology protein 34
OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM
70294) GN=MDM34 PE=3 SV=1
Length = 567
Score = 33.1 bits (74), Expect = 1.2, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Query: 84 NEKSLLYDHMKEELEEKIRRLEEDRNSVDINADLWFFEHNKRGSNQ------NPLSSKRG 137
NE+S L + E L EK+ ++ R S+DI D N RGS N S K
Sbjct: 6 NEESFLDNSFNETLREKLTKMLNSRKSMDIKIDDHLSYANNRGSTSCSNNFDNSSSIKAR 65
Query: 138 PKGFNRMKSRRKAVTVSGPYI 158
+ +KS K V+ P I
Sbjct: 66 DSKLDILKSDVKVCEVNFPTI 86
>sp|O59795|CASP_SCHPO Protein CASP OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=coy1 PE=3 SV=1
Length = 633
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 83 ENEKSLLYDHMKEELEEKIRRLEEDRNSVDINADLWFFEHNKR---GSNQ-NPLSSKRG- 137
E++K+ + E EE IR+LE+D VD+ ++ R S Q +P SS G
Sbjct: 402 ESKKASFLEQKASEQEEVIRKLEKDLADVDVEGSVYLSNTTYRREGTSGQLSPTSSIMGG 461
Query: 138 -PKGFNRMKSRRKAVTVSGPYIVYMLR 163
P FN R +V +G IV +++
Sbjct: 462 NPSLFNGSVLSRNSVNETGSAIVDVIK 488
>sp|Q9CB26|CLPB_MYCLE Chaperone protein ClpB OS=Mycobacterium leprae (strain TN) GN=clpB
PE=3 SV=1
Length = 848
Score = 32.0 bits (71), Expect = 2.7, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 54 EVAAILRQYKLNNVQNQYNAEEQATRQNLENEKSLLYDHMKEELEEKIRRLEEDRNSVDI 113
EV ++R++++ + N E++A+++ LE ++ L D KE L E R + ++N++D+
Sbjct: 415 EVERLVRRFEIEEMA-LVNEEDEASKERLETLRAELADQ-KERLAELTARWQNEKNAIDV 472
Query: 114 NADL 117
+L
Sbjct: 473 VREL 476
>sp|Q9UTB6|SDS3_SCHPO Transcriptional regulatory protein sds3 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=sds3 PE=1 SV=1
Length = 267
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 49/101 (48%)
Query: 16 YRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQNQYNAEE 75
+R + E+E++L + G K L +L+ + E+A R + +N Q +Y E
Sbjct: 28 FRAKKAELEAELESIRNGTCKTLLDLADELRRSRDEELEIAERWRTFLVNRAQEEYEVEM 87
Query: 76 QATRQNLENEKSLLYDHMKEELEEKIRRLEEDRNSVDINAD 116
+A ++ E L + + L EK R++ E ++ DI ++
Sbjct: 88 KAAKEEYEYRCKTLKEMVLSHLNEKKRKIYEAKDMFDIGSE 128
>sp|O52702|MTA1_ACEPA Modification methylase ApaLI OS=Acetobacter pasteurianus GN=apaLIM
PE=3 SV=1
Length = 429
Score = 30.8 bits (68), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 59 LRQYKLNNVQNQYNAEEQATRQNLENEKSLLYDHMKEELEEK--IRRLEEDRNSVDINAD 116
L Y + N ++A R N ++ H++ E E+ + L+ + D+ +
Sbjct: 219 LVPYASSEPVNAFDA-----RMRAGNRVEVVTHHVRVEAAERMQVELLKPGQTMKDLPPE 273
Query: 117 LWFFEH----NKRGSNQNPLSSKRG--PKGFNRMKSRRKAVTVSGP 156
LW + N+R S+ P + KRG P G R+ +++T++GP
Sbjct: 274 LWHESYRRRANRRVSDGTP-TEKRGGAPSGIKRLHGNLQSLTITGP 318
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,874,941
Number of Sequences: 539616
Number of extensions: 2570604
Number of successful extensions: 13727
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 335
Number of HSP's that attempted gapping in prelim test: 13342
Number of HSP's gapped (non-prelim): 704
length of query: 187
length of database: 191,569,459
effective HSP length: 111
effective length of query: 76
effective length of database: 131,672,083
effective search space: 10007078308
effective search space used: 10007078308
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)