AmiGO: BLAST Results


BLAST match view associations BLAST with BRMS1L BRMS1L BRMS1L Breast cancer metastasis-suppressor 1-like protein	protein from Gallus gallus	2.0e-33
BLAST match view associations BLAST with BRMS1L BRMS1L BRMS1L Breast cancer metastasis-suppressor 1-like protein	protein from Bos taurus	2.0e-33
BLAST match view associations BLAST with BRMS1L BRMS1L BRMS1L Breast cancer metastasis-suppressor 1-like protein	protein from Homo sapiens	2.0e-33
BLAST match view associations BLAST with Brms1l Brms1l Brms1l breast cancer metastasis-suppressor 1-like	protein from Mus musculus	2.0e-33
BLAST match view associations BLAST with brms1la brms1la brms1la breast cancer metastasis-suppressor 1-like a	gene_product from Danio rerio	2.9e-32
BLAST match view associations BLAST with CG4400 CG4400 CG4400	protein from Drosophila melanogaster	5.6e-29
BLAST match view associations BLAST with LOC100518234 LOC100518234 LOC100518234 Uncharacterized protein	protein from Sus scrofa	3.2e-26
BLAST match view associations BLAST with Brms1 Brms1 Brms1 breast cancer metastasis-suppressor 1	gene from Rattus norvegicus	3.2e-26
BLAST match view associations BLAST with Brms1 Brms1 Brms1 breast cancer metastasis-suppressor 1	protein from Mus musculus	4.0e-26
BLAST match view associations BLAST with BRMS1 BRMS1 BRMS1 Breast cancer metastasis-suppressor 1 homolog	protein from Bos taurus	5.2e-26
BLAST match view associations BLAST with BRMS1 BRMS1 BRMS1 Breast cancer metastasis-suppressor 1	protein from Homo sapiens	8.4e-26
BLAST match view associations BLAST with BRMS1 BRMS1 BRMS1 Breast cancer metastasis-suppressor 1	protein from Homo sapiens	8.4e-26
BLAST match view associations BLAST with BRMS1 BRMS1 BRMS1 Breast cancer metastasis-suppressor 1	protein from Homo sapiens	8.4e-26
BLAST match view associations BLAST with BRMS1 BRMS1 BRMS1 Uncharacterized protein	protein from Canis lupus familiaris	7.6e-25
BLAST match view associations BLAST with Suds3 Suds3 Suds3 suppressor of defective silencing 3 homolog (S. cerevisiae)	gene from Rattus norvegicus	2.4e-06
BLAST match view associations BLAST with CG14220 CG14220 CG14220	protein from Drosophila melanogaster	3.4e-06
BLAST match view associations BLAST with Suds3 Suds3 Suds3 suppressor of defective silencing 3 homolog (S. cerevisiae)	protein from Mus musculus	2.2e-05
BLAST match view associations BLAST with SUDS3 SUDS3 SUDS3 Uncharacterized protein	protein from Sus scrofa	6.0e-05
BLAST match view associations BLAST with SUDS3 SUDS3 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3	protein from Bos taurus	6.0e-05
BLAST match view associations BLAST with SUDS3 SUDS3 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3	protein from Homo sapiens	6.0e-05
BLAST match view associations BLAST with SUDS3 SUDS3 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3	protein from Pongo abelii	6.0e-05

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy15420
        (187 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|Q5ZLL9 - symbol:BRMS1L "Breast cancer metastasi...   364  2.0e-33   1
UNIPROTKB|A4FV29 - symbol:BRMS1L "Breast cancer metastasi...   364  2.0e-33   1
UNIPROTKB|Q5PSV4 - symbol:BRMS1L "Breast cancer metastasi...   364  2.0e-33   1
MGI|MGI:1196337 - symbol:Brms1l "breast cancer metastasis...   364  2.0e-33   1
ZFIN|ZDB-GENE-050913-49 - symbol:brms1la "breast cancer m...   353  2.9e-32   1
FB|FBgn0030434 - symbol:CG4400 species:7227 "Drosophila m...   322  5.6e-29   1
UNIPROTKB|F1RUT0 - symbol:BRMS1 "Uncharacterized protein"...   296  3.2e-26   1
RGD|1311057 - symbol:Brms1 "breast cancer metastasis-supp...   296  3.2e-26   1
MGI|MGI:2388804 - symbol:Brms1 "breast cancer metastasis-...   295  4.0e-26   1
UNIPROTKB|Q1LZE0 - symbol:BRMS1 "Breast cancer metastasis...   294  5.2e-26   1
UNIPROTKB|E9PJF5 - symbol:BRMS1 "Breast cancer metastasis...   292  8.4e-26   1
UNIPROTKB|G5E9I4 - symbol:BRMS1 "Breast cancer metastasis...   292  8.4e-26   1
UNIPROTKB|Q9HCU9 - symbol:BRMS1 "Breast cancer metastasis...   292  8.4e-26   1
UNIPROTKB|E2RGE9 - symbol:BRMS1 "Uncharacterized protein"...   283  7.6e-25   1
RGD|1305986 - symbol:Suds3 "suppressor of defective silen...   123  2.4e-06   1
FB|FBgn0031036 - symbol:CG14220 species:7227 "Drosophila ...   122  3.4e-06   1
MGI|MGI:1919204 - symbol:Suds3 "suppressor of defective s...   117  2.2e-05   1
UNIPROTKB|F1NZR8 - symbol:SUDS3 "Uncharacterized protein"...   115  4.7e-05   1
UNIPROTKB|F1RKH0 - symbol:SUDS3 "Uncharacterized protein"...   114  6.0e-05   1
UNIPROTKB|A6H6W9 - symbol:SUDS3 "Sin3 histone deacetylase...   114  6.0e-05   1
UNIPROTKB|Q9H7L9 - symbol:SUDS3 "Sin3 histone deacetylase...   114  6.0e-05   1
UNIPROTKB|Q5RBB8 - symbol:SUDS3 "Sin3 histone deacetylase...   114  6.0e-05   1


>UNIPROTKB|Q5ZLL9 [details] [associations]
            symbol:BRMS1L "Breast cancer metastasis-suppressor 1-like
            protein" species:9031 "Gallus gallus" [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] Pfam:PF08598 GO:GO:0005634 GO:GO:0006355
            GO:GO:0006351 eggNOG:NOG244433 HOVERGEN:HBG050734 OrthoDB:EOG4C5CK5
            InterPro:IPR013907 CTD:84312 HOGENOM:HOG000007483 EMBL:AJ719715
            IPI:IPI00579882 RefSeq:NP_001007936.1 UniGene:Gga.14499
            GeneID:423328 KEGG:gga:423328 InParanoid:Q5ZLL9 NextBio:20825817
            Uniprot:Q5ZLL9
        Length = 323

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 79/169 (46%), Positives = 111/169 (65%)

Query:    11 LREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQNQ 70
             L++QLY+ER+ +V++KL EV  G+A EYL PL  LQ+NM+IRT+VA I R+  L +V+N+
Sbjct:    73 LKDQLYKERLSQVDAKLQEVIAGKAPEYLEPLAALQENMQIRTKVAGIYRELCLESVKNK 132

Query:    71 YNAEEQATRQNLENEKSLLYDHMXXXXXXXXXXXXXDRNSVDINADLWFFEHNKRGSNQN 130
             Y  E QA+RQ+ E+EK LLYD +             DR+S+DI ++LW  E   R   ++
Sbjct:   133 YECEIQASRQHCESEKLLLYDTVQSELEEKIRRLEEDRHSIDITSELWNDELQSRKKRKD 192

Query:   131 PLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMS 179
             P S    P        ++K V VSGPYIVYML+D +I+EDWT I+KAM+
Sbjct:   193 PFS----P-------DKKKPVVVSGPYIVYMLQDLDILEDWTTIRKAMA 230


>UNIPROTKB|A4FV29 [details] [associations]
            symbol:BRMS1L "Breast cancer metastasis-suppressor 1-like
            protein" species:9913 "Bos taurus" [GO:0005634 "nucleus"
            evidence=IEA] [GO:0040008 "regulation of growth" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] Pfam:PF08598 GO:GO:0005634 GO:GO:0006355
            GO:GO:0006351 GO:GO:0040008 eggNOG:NOG244433
            GeneTree:ENSGT00530000063177 HOVERGEN:HBG050734 OMA:MPVHSRE
            OrthoDB:EOG4C5CK5 InterPro:IPR013907 EMBL:BC123661 IPI:IPI00688252
            RefSeq:NP_001076897.1 UniGene:Bt.58513 ProteinModelPortal:A4FV29
            SMR:A4FV29 Ensembl:ENSBTAT00000024481 GeneID:514432 KEGG:bta:514432
            CTD:84312 HOGENOM:HOG000007483 InParanoid:A4FV29 NextBio:20871329
            Uniprot:A4FV29
        Length = 323

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 79/169 (46%), Positives = 111/169 (65%)

Query:    11 LREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQNQ 70
             L++QLY+ER+ +V++KL EV  G+A EYL PL  LQ+NM+IRT+VA I R+  L +V+N+
Sbjct:    75 LKDQLYKERLSQVDAKLQEVIAGKAPEYLEPLATLQENMQIRTKVAGIYRELCLESVKNK 134

Query:    71 YNAEEQATRQNLENEKSLLYDHMXXXXXXXXXXXXXDRNSVDINADLWFFEHNKRGSNQN 130
             Y  E QA+RQ+ E+EK LLYD +             DR+S+DI ++LW  E   R   ++
Sbjct:   135 YECEIQASRQHCESEKLLLYDTVQSELEEKIRRLEEDRHSIDITSELWNDELQSRKKRKD 194

Query:   131 PLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMS 179
             P S    P        ++K V VSGPYIVYML+D +I+EDWT I+KAM+
Sbjct:   195 PFS----P-------DKKKPVVVSGPYIVYMLQDLDILEDWTTIRKAMA 232


>UNIPROTKB|Q5PSV4 [details] [associations]
            symbol:BRMS1L "Breast cancer metastasis-suppressor 1-like
            protein" species:9606 "Homo sapiens" [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0040008 "regulation
            of growth" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            Pfam:PF08598 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
            GO:GO:0040008 eggNOG:NOG244433 HOVERGEN:HBG050734 OMA:MPVHSRE
            OrthoDB:EOG4C5CK5 InterPro:IPR013907 CTD:84312 HOGENOM:HOG000007483
            EMBL:AY827074 EMBL:AL162311 EMBL:BC006250 IPI:IPI00031653
            RefSeq:NP_115728.2 UniGene:Hs.525299 ProteinModelPortal:Q5PSV4
            SMR:Q5PSV4 IntAct:Q5PSV4 STRING:Q5PSV4 PhosphoSite:Q5PSV4
            DMDM:158706476 PRIDE:Q5PSV4 DNASU:84312 Ensembl:ENST00000216807
            GeneID:84312 KEGG:hsa:84312 UCSC:uc001wtl.3 GeneCards:GC14P036295
            HGNC:HGNC:20512 HPA:HPA046623 neXtProt:NX_Q5PSV4
            PharmGKB:PA134968356 InParanoid:Q5PSV4 GenomeRNAi:84312
            NextBio:74010 ArrayExpress:Q5PSV4 Bgee:Q5PSV4 CleanEx:HS_BRMS1L
            Genevestigator:Q5PSV4 Uniprot:Q5PSV4
        Length = 323

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 79/169 (46%), Positives = 111/169 (65%)

Query:    11 LREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQNQ 70
             L++QLY+ER+ +V++KL EV  G+A EYL PL  LQ+NM+IRT+VA I R+  L +V+N+
Sbjct:    75 LKDQLYKERLSQVDAKLQEVIAGKAPEYLEPLATLQENMQIRTKVAGIYRELCLESVKNK 134

Query:    71 YNAEEQATRQNLENEKSLLYDHMXXXXXXXXXXXXXDRNSVDINADLWFFEHNKRGSNQN 130
             Y  E QA+RQ+ E+EK LLYD +             DR+S+DI ++LW  E   R   ++
Sbjct:   135 YECEIQASRQHCESEKLLLYDTVQSELEEKIRRLEEDRHSIDITSELWNDELQSRKKRKD 194

Query:   131 PLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMS 179
             P S    P        ++K V VSGPYIVYML+D +I+EDWT I+KAM+
Sbjct:   195 PFS----P-------DKKKPVVVSGPYIVYMLQDLDILEDWTTIRKAMA 232


>MGI|MGI:1196337 [details] [associations]
            symbol:Brms1l "breast cancer metastasis-suppressor 1-like"
            species:10090 "Mus musculus" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008150
            "biological_process" evidence=ND] [GO:0040008 "regulation of
            growth" evidence=IEA] MGI:MGI:1196337 Pfam:PF08598 GO:GO:0005634
            GO:GO:0006355 GO:GO:0006351 GO:GO:0040008 eggNOG:NOG244433
            GeneTree:ENSGT00530000063177 HOVERGEN:HBG050734 OMA:MPVHSRE
            OrthoDB:EOG4C5CK5 InterPro:IPR013907 CTD:84312 HOGENOM:HOG000007483
            EMBL:AK154678 EMBL:AK155742 EMBL:BC034885 IPI:IPI00651889
            IPI:IPI00755094 RefSeq:NP_001032845.1 UniGene:Mm.24761
            ProteinModelPortal:Q3U1T3 SMR:Q3U1T3 STRING:Q3U1T3
            PhosphoSite:Q3U1T3 PaxDb:Q3U1T3 PRIDE:Q3U1T3
            Ensembl:ENSMUST00000059250 GeneID:52592 KEGG:mmu:52592
            UCSC:uc007noz.1 UCSC:uc007npa.1 InParanoid:Q3U1T3 NextBio:309189
            Bgee:Q3U1T3 CleanEx:MM_BRMS1L Genevestigator:Q3U1T3 Uniprot:Q3U1T3
        Length = 323

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 79/169 (46%), Positives = 111/169 (65%)

Query:    11 LREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQNQ 70
             L++QLY+ER+ +V++KL EV  G+A EYL PL  LQ+NM+IRT+VA I R+  L +V+N+
Sbjct:    75 LKDQLYKERLSQVDAKLQEVIAGKAPEYLEPLATLQENMQIRTKVAGIYRELCLESVKNK 134

Query:    71 YNAEEQATRQNLENEKSLLYDHMXXXXXXXXXXXXXDRNSVDINADLWFFEHNKRGSNQN 130
             Y  E QA+RQ+ E+EK LLYD +             DR+S+DI ++LW  E   R   ++
Sbjct:   135 YECEIQASRQHCESEKLLLYDTVQSELEEKIRRLEEDRHSIDITSELWNDELQSRKKRKD 194

Query:   131 PLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMS 179
             P S    P        ++K V VSGPYIVYML+D +I+EDWT I+KAM+
Sbjct:   195 PFS----P-------DKKKPVVVSGPYIVYMLQDLDILEDWTTIRKAMA 232


>ZFIN|ZDB-GENE-050913-49 [details] [associations]
            symbol:brms1la "breast cancer metastasis-suppressor
            1-like a" species:7955 "Danio rerio" [GO:0003674
            "molecular_function" evidence=ND] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] Pfam:PF08598 ZFIN:ZDB-GENE-050913-49 GO:GO:0005634
            GO:GO:0006355 GO:GO:0006351 EMBL:BC097187 IPI:IPI00501672
            RefSeq:NP_001025273.1 UniGene:Dr.109638 Ensembl:ENSDART00000003418
            GeneID:792017 KEGG:dre:792017 CTD:792017 eggNOG:NOG244433
            GeneTree:ENSGT00530000063177 HOVERGEN:HBG050734 InParanoid:Q4V8V1
            OMA:MPVHSRE OrthoDB:EOG4C5CK5 NextBio:20930889 Bgee:Q4V8V1
            InterPro:IPR013907 Uniprot:Q4V8V1
        Length = 323

 Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
 Identities = 78/169 (46%), Positives = 115/169 (68%)

Query:    11 LREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQNQ 70
             L++QLY+ER+ +V++KL EV  G+A EYL PL  LQ+NM+IRT+VA I R+  L +V+N+
Sbjct:    73 LKDQLYKERLNQVDAKLQEVMSGKAAEYLEPLATLQENMQIRTKVAGIYRELCLESVKNK 132

Query:    71 YNAEEQATRQNLENEKSLLYDHMXXXXXXXXXXXXXDRNSVDINADLWFFEHNKRGSNQN 130
             Y+ E QA  Q+ E+EK LL+D +             DR+S+DI ++LW   +++  S +N
Sbjct:   133 YDCETQAAFQHWESEKLLLFDTVQTELEEKIRRLEEDRHSIDITSELW---NDELQSRKN 189

Query:   131 PLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMS 179
                 K+ P  F+  K ++K V VSGPYIVYML+D +I+EDWT I+KAM+
Sbjct:   190 ---KKKDP--FSPDK-KKKPVVVSGPYIVYMLQDLDILEDWTAIRKAMA 232


>FB|FBgn0030434 [details] [associations]
            symbol:CG4400 species:7227 "Drosophila melanogaster"
            [GO:0070822 "Sin3-type complex" evidence=IDA] Pfam:PF08598
            EMBL:AE014298 eggNOG:NOG244433 GeneTree:ENSGT00530000063177
            InterPro:IPR013907 GO:GO:0070822 EMBL:AY102677 RefSeq:NP_572840.1
            UniGene:Dm.13361 SMR:Q9VYI2 STRING:Q9VYI2
            EnsemblMetazoa:FBtr0073693 GeneID:32243 KEGG:dme:Dmel_CG4400
            UCSC:CG4400-RA FlyBase:FBgn0030434 InParanoid:Q9VYI2 OMA:SEEFVQP
            OrthoDB:EOG4KSN1T GenomeRNAi:32243 NextBio:777551 Uniprot:Q9VYI2
        Length = 259

 Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
 Identities = 74/177 (41%), Positives = 111/177 (62%)

Query:    11 LREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQNQ 70
             LREQ Y ERI  +E +L EV  G+++E++ P ++L    R R EVA +LR+Y+L N++++
Sbjct:    73 LREQYYVERINLIERQLAEVRSGRSEEFVQPQKELDKKYRTRIEVADVLRKYRLQNIEHK 132

Query:    71 YNAEEQATRQNLENEKSLLYDHMXXXXXXXXXXXXXDRNSVDIN-ADLWFFEHNKRGSNQ 129
             Y +EEQA  Q+ E+EK +  D++             DR++VDI+ AD W       G+++
Sbjct:   133 YQSEEQAAVQHFESEKHMALDNLREEFMERIRRLEEDRHNVDISWAD-W-------GTDK 184

Query:   130 NPLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMSQRKCDLT 186
                S  RGP        R+KAVTV+GPY+VYMLR+E+I+EDWTII+KA+ +     T
Sbjct:   185 RQ-SKVRGP-------GRKKAVTVTGPYVVYMLREEDIMEDWTIIRKALKRSSSSAT 233


>UNIPROTKB|F1RUT0 [details] [associations]
            symbol:BRMS1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0009987 "cellular process" evidence=IEA] Pfam:PF08598
            GO:GO:0009987 GeneTree:ENSGT00530000063177 InterPro:IPR013907
            OMA:SSKTWDS EMBL:CU462998 EMBL:CU928034 RefSeq:XP_003122533.1
            RefSeq:XP_003480720.1 Ensembl:ENSSSCT00000014144 GeneID:100518234
            KEGG:ssc:100518234 Uniprot:F1RUT0
        Length = 246

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 69/167 (41%), Positives = 103/167 (61%)

Query:    11 LREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQNQ 70
             L+E+L+RER+ ++  +L EV   +A EY  PL  LQ +++IR +VA I + + L+ ++N+
Sbjct:    74 LKEKLFRERLSQLRVRLEEVGAERAPEYTEPLGGLQRSLKIRIQVAGIYKGFCLDVIRNK 133

Query:    71 YNAEEQATRQNLENEKSLLYDHMXXXXXXXXXXXXXDRNSVDINADLWFFEHNKRGSNQN 130
             Y  E Q  RQ+LE+EK LLYD +             DR S+DI+++ W  + + RGS++ 
Sbjct:   134 YECELQGARQHLESEKLLLYDTLQGELQERIQRLEEDRQSLDISSEWWDDKLHARGSSKT 193

Query:   131 PLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKA 177
               S    P        R+KA  VSGPYIVYML++ +I+EDWT IKKA
Sbjct:   194 WDSLP--PS------KRKKAPLVSGPYIVYMLQEIDILEDWTAIKKA 232


>RGD|1311057 [details] [associations]
            symbol:Brms1 "breast cancer metastasis-suppressor 1"
            species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
            evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006915 "apoptotic process" evidence=IEA] [GO:0009987 "cellular
            process" evidence=ISO] [GO:0032088 "negative regulation of
            NF-kappaB transcription factor activity" evidence=ISO;ISS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=ISO;ISS] [GO:0051059 "NF-kappaB binding" evidence=ISO]
            [GO:0090312 "positive regulation of protein deacetylation"
            evidence=ISO;ISS] [GO:2000210 "positive regulation of anoikis"
            evidence=ISO;ISS] Pfam:PF08598 RGD:1311057 GO:GO:0005634
            GO:GO:0005737 GO:GO:0006915 GO:GO:0045892 GO:GO:0006351
            GO:GO:2000210 GO:GO:0032088 GeneTree:ENSGT00530000063177
            HOVERGEN:HBG050734 InterPro:IPR013907 HOGENOM:HOG000007483
            CTD:25855 eggNOG:NOG260250 OrthoDB:EOG4T784C GO:GO:0090312
            EMBL:BC088469 IPI:IPI00371701 RefSeq:NP_001009605.1
            RefSeq:XP_003749086.1 UniGene:Rn.2839 Ensembl:ENSRNOT00000027258
            GeneID:100911841 GeneID:293668 KEGG:rno:100911841 KEGG:rno:293668
            UCSC:RGD:1311057 InParanoid:Q5M7T3 NextBio:636686
            Genevestigator:Q5M7T3 Uniprot:Q5M7T3
        Length = 246

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 68/167 (40%), Positives = 103/167 (61%)

Query:    11 LREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQNQ 70
             L+E+L+RER+ ++  +L EV   +A EY  PL  LQ +++IR +VA I + + L+ ++N+
Sbjct:    74 LKEKLFRERLSQLRLRLEEVGAERAPEYTEPLGGLQQSLKIRIQVAGIYKGFCLDVIRNK 133

Query:    71 YNAEEQATRQNLENEKSLLYDHMXXXXXXXXXXXXXDRNSVDINADLWFFEHNKRGSNQN 130
             Y  E Q  +Q+LE+EK LLYD +             DR S+DI+++ W  + + RGS++ 
Sbjct:   134 YECELQGAKQHLESEKLLLYDTLLGELQERIQRLEEDRQSLDISSEWWDDKLHSRGSSKT 193

Query:   131 PLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKA 177
               S    P        R+KA  VSGPYIVYML++ +I+EDWT IKKA
Sbjct:   194 WDSVP--PS------KRKKAPLVSGPYIVYMLQEIDILEDWTAIKKA 232


>MGI|MGI:2388804 [details] [associations]
            symbol:Brms1 "breast cancer metastasis-suppressor 1"
            species:10090 "Mus musculus" [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006915 "apoptotic
            process" evidence=IEA] [GO:0009987 "cellular process" evidence=IDA]
            [GO:0032088 "negative regulation of NF-kappaB transcription factor
            activity" evidence=ISO] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0051059 "NF-kappaB
            binding" evidence=ISO] [GO:0090312 "positive regulation of protein
            deacetylation" evidence=ISO] [GO:2000210 "positive regulation of
            anoikis" evidence=ISO] MGI:MGI:2388804 Pfam:PF08598 GO:GO:0005634
            GO:GO:0005737 GO:GO:0006915 GO:GO:0045892 GO:GO:0006351
            GO:GO:2000210 GO:GO:0032088 GO:GO:0009987
            GeneTree:ENSGT00530000063177 HOVERGEN:HBG050734 InterPro:IPR013907
            HOGENOM:HOG000007483 CTD:25855 eggNOG:NOG260250 OMA:SSKTWDS
            OrthoDB:EOG4T784C GO:GO:0090312 EMBL:AF233580 EMBL:AF368292
            EMBL:BC016108 IPI:IPI00118010 RefSeq:NP_598916.1 UniGene:Mm.489654
            ProteinModelPortal:Q99N20 SMR:Q99N20 PhosphoSite:Q99N20
            PRIDE:Q99N20 Ensembl:ENSMUST00000116567 GeneID:107392
            KEGG:mmu:107392 InParanoid:Q99N20 NextBio:358740 Bgee:Q99N20
            CleanEx:MM_BRMS1 Genevestigator:Q99N20
            GermOnline:ENSMUSG00000024888 Uniprot:Q99N20
        Length = 246

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 68/167 (40%), Positives = 101/167 (60%)

Query:    11 LREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQNQ 70
             L+E+L+RER+ ++  +L EV   +A EY  PL  LQ +++IR +VA I + + L+ ++N+
Sbjct:    74 LKEKLFRERLSQLRLRLEEVGAERAPEYTEPLGGLQQSLKIRIQVAGIYKGFCLDVIRNK 133

Query:    71 YNAEEQATRQNLENEKSLLYDHMXXXXXXXXXXXXXDRNSVDINADLWFFEHNKRGSNQN 130
             Y  E Q  +Q+LE+EK LLYD +             DR S+DI+++ W  + + R S   
Sbjct:   134 YECELQGAKQHLESEKMLLYDTLLGELQERIQRLEEDRQSLDISSEWWDDKLHSRSS--- 190

Query:   131 PLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKA 177
                SK G         R+KA  VSGPYIVYML++ +I+EDWT IKKA
Sbjct:   191 ---SKAGDA--MPPSKRKKAPLVSGPYIVYMLQEIDILEDWTAIKKA 232


>UNIPROTKB|Q1LZE0 [details] [associations]
            symbol:BRMS1 "Breast cancer metastasis-suppressor 1
            homolog" species:9913 "Bos taurus" [GO:2000210 "positive regulation
            of anoikis" evidence=ISS] [GO:0090312 "positive regulation of
            protein deacetylation" evidence=ISS] [GO:0032088 "negative
            regulation of NF-kappaB transcription factor activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006915 "apoptotic
            process" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] Pfam:PF08598 GO:GO:0005634 GO:GO:0005737
            GO:GO:0006915 GO:GO:0045892 GO:GO:0006351 GO:GO:2000210
            GO:GO:0032088 GeneTree:ENSGT00530000063177 HOVERGEN:HBG050734
            InterPro:IPR013907 HOGENOM:HOG000007483 EMBL:BC116061
            IPI:IPI00686414 RefSeq:NP_001069872.1 UniGene:Bt.28488
            Ensembl:ENSBTAT00000023526 GeneID:615952 KEGG:bta:615952 CTD:25855
            eggNOG:NOG260250 InParanoid:Q1LZE0 OMA:SSKTWDS OrthoDB:EOG4T784C
            NextBio:20899878 GO:GO:0090312 Uniprot:Q1LZE0
        Length = 246

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 69/167 (41%), Positives = 105/167 (62%)

Query:    11 LREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQNQ 70
             L+E+L+RER+ ++  +L EV   +A EY  PL  LQ +++IR +VA I + + L+ ++N+
Sbjct:    74 LKEKLFRERLSQLRVRLEEVGAERAPEYTEPLGGLQRSLKIRIQVAGIYKGFCLDVIRNK 133

Query:    71 YNAEEQATRQNLENEKSLLYDHMXXXXXXXXXXXXXDRNSVDINADLWFFEHNKRGSNQN 130
             Y  E Q  +Q+LE+EK LLYD +             DR S+DI+++ W  + + RGS++ 
Sbjct:   134 YECELQGAKQHLESEKLLLYDTLQGELQERIQRLEEDRQSLDISSEWWDDKLHARGSSRT 193

Query:   131 PLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKA 177
               S    P   N+   R+KA  VSGPYIVYML++ +I+EDWT IKKA
Sbjct:   194 WDSLP--P---NK---RKKAPLVSGPYIVYMLQEIDILEDWTAIKKA 232


>UNIPROTKB|E9PJF5 [details] [associations]
            symbol:BRMS1 "Breast cancer metastasis-suppressor 1"
            species:9606 "Homo sapiens" [GO:0009987 "cellular process"
            evidence=IEA] Pfam:PF08598 GO:GO:0009987 InterPro:IPR013907
            HGNC:HGNC:17262 EMBL:AP001107 IPI:IPI00980320
            ProteinModelPortal:E9PJF5 SMR:E9PJF5 Ensembl:ENST00000530756
            ArrayExpress:E9PJF5 Bgee:E9PJF5 Uniprot:E9PJF5
        Length = 244

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 67/167 (40%), Positives = 104/167 (62%)

Query:    11 LREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQNQ 70
             L+E+L+RER+ ++  +L EV   +A EY  PL  LQ +++IR +VA I + + L+ ++N+
Sbjct:    74 LKEKLFRERLSQLRLRLEEVGAERAPEYTEPLGGLQRSLKIRIQVAGIYKGFCLDVIRNK 133

Query:    71 YNAEEQATRQNLENEKSLLYDHMXXXXXXXXXXXXXDRNSVDINADLWFFEHNKRGSNQN 130
             Y  E Q  +Q+LE+EK LLYD +             DR S+D++++ W  + + RGS+++
Sbjct:   134 YECELQGAKQHLESEKLLLYDTLQGELQERIQRLEEDRQSLDLSSEWWDDKLHARGSSRS 193

Query:   131 PLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKA 177
               S    P        R+KA  VSGPYIVYML++ +I+EDWT IKKA
Sbjct:   194 WDSLP--PS------KRKKAPLVSGPYIVYMLQEIDILEDWTAIKKA 232


>UNIPROTKB|G5E9I4 [details] [associations]
            symbol:BRMS1 "Breast cancer metastasis suppressor 1,
            isoform CRA_c" species:9606 "Homo sapiens" [GO:0009987 "cellular
            process" evidence=IEA] Pfam:PF08598 EMBL:CH471076 GO:GO:0009987
            InterPro:IPR013907 CTD:25855 OMA:SSKTWDS UniGene:Hs.100426
            GeneID:25855 KEGG:hsa:25855 HGNC:HGNC:17262 GenomeRNAi:25855
            NextBio:47213 EMBL:AP001107 RefSeq:NP_001020128.1
            ProteinModelPortal:G5E9I4 SMR:G5E9I4 PRIDE:G5E9I4
            Ensembl:ENST00000425825 ArrayExpress:G5E9I4 Bgee:G5E9I4
            Uniprot:G5E9I4
        Length = 290

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 67/167 (40%), Positives = 104/167 (62%)

Query:    11 LREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQNQ 70
             L+E+L+RER+ ++  +L EV   +A EY  PL  LQ +++IR +VA I + + L+ ++N+
Sbjct:    74 LKEKLFRERLSQLRLRLEEVGAERAPEYTEPLGGLQRSLKIRIQVAGIYKGFCLDVIRNK 133

Query:    71 YNAEEQATRQNLENEKSLLYDHMXXXXXXXXXXXXXDRNSVDINADLWFFEHNKRGSNQN 130
             Y  E Q  +Q+LE+EK LLYD +             DR S+D++++ W  + + RGS+++
Sbjct:   134 YECELQGAKQHLESEKLLLYDTLQGELQERIQRLEEDRQSLDLSSEWWDDKLHARGSSRS 193

Query:   131 PLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKA 177
               S    P        R+KA  VSGPYIVYML++ +I+EDWT IKKA
Sbjct:   194 WDSLP--PS------KRKKAPLVSGPYIVYMLQEIDILEDWTAIKKA 232


>UNIPROTKB|Q9HCU9 [details] [associations]
            symbol:BRMS1 "Breast cancer metastasis-suppressor 1"
            species:9606 "Homo sapiens" [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006915 "apoptotic process"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0032088 "negative
            regulation of NF-kappaB transcription factor activity"
            evidence=IDA] [GO:0051059 "NF-kappaB binding" evidence=IDA]
            [GO:0090312 "positive regulation of protein deacetylation"
            evidence=IDA] [GO:2000210 "positive regulation of anoikis"
            evidence=IMP] Pfam:PF08598 GO:GO:0005634 GO:GO:0005737
            GO:GO:0006915 GO:GO:0045892 GO:GO:0006351 GO:GO:2000210
            GO:GO:0032088 GO:GO:0051059 HOVERGEN:HBG050734 InterPro:IPR013907
            HOGENOM:HOG000007483 CTD:25855 eggNOG:NOG260250 OrthoDB:EOG4T784C
            GO:GO:0090312 EMBL:AF159141 EMBL:AF281036 EMBL:CR457173
            EMBL:AK313773 EMBL:BC009834 IPI:IPI00018017 RefSeq:NP_056214.1
            UniGene:Hs.100426 PDB:2XUS PDBsum:2XUS ProteinModelPortal:Q9HCU9
            SMR:Q9HCU9 DIP:DIP-24250N IntAct:Q9HCU9 MINT:MINT-1389009
            STRING:Q9HCU9 PhosphoSite:Q9HCU9 DMDM:18202959 PaxDb:Q9HCU9
            PRIDE:Q9HCU9 DNASU:25855 Ensembl:ENST00000359957 GeneID:25855
            KEGG:hsa:25855 UCSC:uc001oho.1 GeneCards:GC11M066104
            HGNC:HGNC:17262 HPA:HPA019637 MIM:606259 neXtProt:NX_Q9HCU9
            PharmGKB:PA164741342 InParanoid:Q9HCU9 PhylomeDB:Q9HCU9
            EvolutionaryTrace:Q9HCU9 GenomeRNAi:25855 NextBio:47213
            ArrayExpress:Q9HCU9 Bgee:Q9HCU9 CleanEx:HS_BRMS1
            Genevestigator:Q9HCU9 GermOnline:ENSG00000174744 Uniprot:Q9HCU9
        Length = 246

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 67/167 (40%), Positives = 104/167 (62%)

Query:    11 LREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQNQ 70
             L+E+L+RER+ ++  +L EV   +A EY  PL  LQ +++IR +VA I + + L+ ++N+
Sbjct:    74 LKEKLFRERLSQLRLRLEEVGAERAPEYTEPLGGLQRSLKIRIQVAGIYKGFCLDVIRNK 133

Query:    71 YNAEEQATRQNLENEKSLLYDHMXXXXXXXXXXXXXDRNSVDINADLWFFEHNKRGSNQN 130
             Y  E Q  +Q+LE+EK LLYD +             DR S+D++++ W  + + RGS+++
Sbjct:   134 YECELQGAKQHLESEKLLLYDTLQGELQERIQRLEEDRQSLDLSSEWWDDKLHARGSSRS 193

Query:   131 PLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKA 177
               S    P        R+KA  VSGPYIVYML++ +I+EDWT IKKA
Sbjct:   194 WDSLP--PS------KRKKAPLVSGPYIVYMLQEIDILEDWTAIKKA 232


>UNIPROTKB|E2RGE9 [details] [associations]
            symbol:BRMS1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0009987 "cellular process" evidence=IEA]
            Pfam:PF08598 GO:GO:0009987 GeneTree:ENSGT00530000063177
            InterPro:IPR013907 OMA:SSKTWDS EMBL:AAEX03011628
            Ensembl:ENSCAFT00000020296 Uniprot:E2RGE9
        Length = 249

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 64/169 (37%), Positives = 102/169 (60%)

Query:    11 LREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQNQ 70
             L+E+L+RER+ ++  +L EV   +A EY  PL  LQ +++IR +VA I + + L+ ++N+
Sbjct:    74 LKEKLFRERLSQLRVRLEEVGAERAPEYTEPLGGLQRSLKIRIQVAGIYKGFCLDVIRNK 133

Query:    71 YNAEEQATRQNLENEKSLLYDHMXXXXXXXXXXXXXDRNSVDINADLWFFEHNKRGSNQN 130
             Y  E Q  +Q+LE+EK LLYD +             DR S+DI+++ W           +
Sbjct:   134 YECELQGAKQHLESEKLLLYDTLQGELQERIQRLEEDRQSLDISSEWW----------DD 183

Query:   131 PLSSKRGPKGFNRM--KSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKA 177
              L ++   K ++ +    R+KA  VSGPY+VYML++ +I+EDWT IKKA
Sbjct:   184 KLHARSSAKTWDSLPPSKRKKAPLVSGPYMVYMLQEIDILEDWTAIKKA 232


>RGD|1305986 [details] [associations]
            symbol:Suds3 "suppressor of defective silencing 3 homolog (S.
            cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016580 "Sin3
            complex" evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
            [GO:0042802 "identical protein binding" evidence=ISO] [GO:0042803
            "protein homodimerization activity" evidence=ISO] [GO:0042826
            "histone deacetylase binding" evidence=ISO] [GO:0043065 "positive
            regulation of apoptotic process" evidence=ISO] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0004407 "histone deacetylase activity" evidence=ISO]
            Pfam:PF08598 RGD:1305986 GO:GO:0045892 GeneTree:ENSGT00530000063177
            InterPro:IPR013907 GO:GO:0016580 OrthoDB:EOG4N8R5F IPI:IPI00363650
            Ensembl:ENSRNOT00000001504 UCSC:RGD:1305986 Uniprot:D3ZYN5
        Length = 332

 Score = 123 (48.4 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 38/175 (21%), Positives = 80/175 (45%)

Query:     9 VGLREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQ 68
             V ++EQ+Y++++  ++ +L +++ G  +EY   ++KL    R R   A +  Q +   V+
Sbjct:    66 VEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYRERIRNAELFLQLETEQVE 125

Query:    69 NQYNAEEQATRQNLENEKSLLYDHMXXXXXXXXXXXXXDRNSVDINADLWFFEH-NKRGS 127
               Y  E++A  +  E++K  L +++             ++ ++++  D    +    R  
Sbjct:   126 RNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKL 185

Query:   128 NQNPLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMSQRK 182
              + P      P        RRK      P + Y+L DE+I+ED   + K  S ++
Sbjct:   186 RRRPNDPVPIPD------KRRKPAP---PLLNYLLTDEQIMEDLRTLNKLKSPKR 231


>FB|FBgn0031036 [details] [associations]
            symbol:CG14220 species:7227 "Drosophila melanogaster"
            [GO:0070822 "Sin3-type complex" evidence=IDA] Pfam:PF08598
            InterPro:IPR013907 GO:GO:0070822 eggNOG:NOG311652 EMBL:AY119157
            PaxDb:Q8MS11 PRIDE:Q8MS11 FlyBase:FBgn0031036 InParanoid:Q8MS11
            OrthoDB:EOG4GHX58 ArrayExpress:Q8MS11 Bgee:Q8MS11 Uniprot:Q8MS11
        Length = 327

 Score = 122 (48.0 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 41/169 (24%), Positives = 80/169 (47%)

Query:    11 LREQLYRERIVEVESKLNEVELGQA--KEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQ 68
             L+EQ+Y+ ++  ++ ++ E  LGQ    EYL  ++KL   ++ R  +  + ++Y    V+
Sbjct:    60 LKEQMYQHKLFNLQKQMEE--LGQLVHPEYLKRVKKLDSQLKERRRMNEVYKEYMRECVE 117

Query:    69 NQYNAEEQATRQNLENEKSLLYDHMXXXXXXXXXXXXXDRNSVDINADLWFFEHN-KRGS 127
               Y  E+ A ++  + +   L D++             +R S+++  D    +    R  
Sbjct:   118 RDYVLEKMAAQKEYDEKMMDLKDNLISDFEDRKRQIENERFSIELTNDSMEIKTTITRKL 177

Query:   128 NQNPLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKK 176
              + P  ++  P     ++ RRK  T  G  +VY L D+EI  D  II++
Sbjct:   178 RRRP--NEPLPV----IEKRRKPAT--GQLLVYQLDDKEIESDLKIIQR 218


>MGI|MGI:1919204 [details] [associations]
            symbol:Suds3 "suppressor of defective silencing 3 homolog
            (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006915 "apoptotic
            process" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
            [GO:0016580 "Sin3 complex" evidence=IDA] [GO:0019899 "enzyme
            binding" evidence=ISO] [GO:0042802 "identical protein binding"
            evidence=IPI] [GO:0042803 "protein homodimerization activity"
            evidence=IPI] [GO:0042826 "histone deacetylase binding"
            evidence=IDA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=ISO] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] MGI:MGI:1919204
            Pfam:PF08598 GO:GO:0045892 GO:GO:0006351 GO:GO:0043065
            GO:GO:0042826 GO:GO:0016575 GeneTree:ENSGT00530000063177
            InterPro:IPR013907 GO:GO:0016580 CTD:64426 eggNOG:NOG311652
            HOGENOM:HOG000007054 HOVERGEN:HBG108465 OrthoDB:EOG4N8R5F
            EMBL:AF469109 EMBL:AK043652 EMBL:AK045475 EMBL:AK138947
            EMBL:AK150633 EMBL:BC055764 EMBL:BC062176 IPI:IPI00408803
            RefSeq:NP_001116138.1 RefSeq:NP_848737.3 UniGene:Mm.34456
            ProteinModelPortal:Q8BR65 SMR:Q8BR65 IntAct:Q8BR65 STRING:Q8BR65
            PhosphoSite:Q8BR65 PaxDb:Q8BR65 PRIDE:Q8BR65
            Ensembl:ENSMUST00000086471 Ensembl:ENSMUST00000166397 GeneID:71954
            KEGG:mmu:71954 UCSC:uc008zff.2 InParanoid:Q8BR65 NextBio:335040
            Bgee:Q8BR65 Genevestigator:Q8BR65 GermOnline:ENSMUSG00000066900
            Uniprot:Q8BR65
        Length = 328

 Score = 117 (46.2 bits), Expect = 2.2e-05, P = 2.2e-05
 Identities = 37/175 (21%), Positives = 79/175 (45%)

Query:     9 VGLREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQ 68
             V ++EQ+Y++++  ++ +L +++ G  +EY   ++KL    R R   A +  Q +   V+
Sbjct:    66 VEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYRERIRNAELFLQLETEQVE 125

Query:    69 NQYNAEEQATRQNLENEKSLLYDHMXXXXXXXXXXXXXDRNSVDINADLWFFEH-NKRGS 127
               Y  E++A  +  E++K  L +++             ++ ++++  D    +    R  
Sbjct:   126 RNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKL 185

Query:   128 NQNPLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMSQRK 182
              + P      P        RRK        + Y+L DE+I+ED   + K  S ++
Sbjct:   186 RRRPNDPVPIPD------KRRKPAPAQ---LNYLLTDEQIMEDLRTLNKLKSPKR 231


>UNIPROTKB|F1NZR8 [details] [associations]
            symbol:SUDS3 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0042803
            "protein homodimerization activity" evidence=IEA] [GO:0042826
            "histone deacetylase binding" evidence=IEA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IEA]
            Pfam:PF08598 GO:GO:0045892 GeneTree:ENSGT00530000063177
            InterPro:IPR013907 GO:GO:0016580 OMA:DNTKISC EMBL:AADN02043184
            IPI:IPI00821807 Ensembl:ENSGALT00000038270 ArrayExpress:F1NZR8
            Uniprot:F1NZR8
        Length = 336

 Score = 115 (45.5 bits), Expect = 4.7e-05, P = 4.7e-05
 Identities = 36/175 (20%), Positives = 80/175 (45%)

Query:     9 VGLREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQ 68
             V ++EQ+Y++++  ++ +L +++ G  +EY   ++KL    + R   A +  Q + + V+
Sbjct:    74 VEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERIRNAELFLQLETDQVE 133

Query:    69 NQYNAEEQATRQNLENEKSLLYDHMXXXXXXXXXXXXXDRNSVDINADLWFFEH-NKRGS 127
               Y  E++A  +  E++K  L +++             ++ ++++  D    +    R  
Sbjct:   134 KNYVKEKKAAAKEFEDKKIELKENLIAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKL 193

Query:   128 NQNPLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMSQRK 182
              + P      P        RRK        + Y+L DE+I+ED   + K  S ++
Sbjct:   194 RRRPNDPVPIPD------KRRKPAPEQ---LNYLLTDEQIMEDLRTLNKLKSPKR 239


>UNIPROTKB|F1RKH0 [details] [associations]
            symbol:SUDS3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0042826 "histone deacetylase
            binding" evidence=IEA] [GO:0042803 "protein homodimerization
            activity" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA]
            Pfam:PF08598 GO:GO:0045892 GeneTree:ENSGT00530000063177
            InterPro:IPR013907 GO:GO:0016580 CTD:64426 OMA:DNTKISC
            EMBL:CU468173 RefSeq:NP_001230337.1 UniGene:Ssc.43986
            Ensembl:ENSSSCT00000010795 GeneID:100153179 KEGG:ssc:100153179
            Uniprot:F1RKH0
        Length = 326

 Score = 114 (45.2 bits), Expect = 6.0e-05, P = 6.0e-05
 Identities = 36/175 (20%), Positives = 79/175 (45%)

Query:     9 VGLREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQ 68
             V ++EQ+Y++++  ++ +L +++ G  +EY   ++KL    + R   A +  Q +   V+
Sbjct:    64 VEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERIRNAELFLQLETEQVE 123

Query:    69 NQYNAEEQATRQNLENEKSLLYDHMXXXXXXXXXXXXXDRNSVDINADLWFFEH-NKRGS 127
               Y  E++A  +  E++K  L +++             ++ ++++  D    +    R  
Sbjct:   124 RNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKL 183

Query:   128 NQNPLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMSQRK 182
              + P      P        RRK        + Y+L DE+I+ED   + K  S ++
Sbjct:   184 RRRPNDPVPIPD------KRRKPAPAQ---LNYLLTDEQIMEDLRTLNKLKSPKR 229


>UNIPROTKB|A6H6W9 [details] [associations]
            symbol:SUDS3 "Sin3 histone deacetylase corepressor complex
            component SDS3" species:9913 "Bos taurus" [GO:0005634 "nucleus"
            evidence=ISS] [GO:0004407 "histone deacetylase activity"
            evidence=ISS] [GO:0043065 "positive regulation of apoptotic
            process" evidence=ISS] [GO:0016575 "histone deacetylation"
            evidence=ISS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0042826 "histone deacetylase
            binding" evidence=IEA] [GO:0042803 "protein homodimerization
            activity" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA]
            [GO:0006915 "apoptotic process" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] Pfam:PF08598
            GO:GO:0005634 GO:GO:0045892 GO:GO:0006351 GO:GO:0043065
            GO:GO:0016575 GeneTree:ENSGT00530000063177 InterPro:IPR013907
            GO:GO:0016580 EMBL:BC146027 IPI:IPI00854387 RefSeq:NP_001092361.1
            UniGene:Bt.70887 STRING:A6H6W9 PRIDE:A6H6W9
            Ensembl:ENSBTAT00000026327 GeneID:506646 KEGG:bta:506646 CTD:64426
            eggNOG:NOG311652 HOGENOM:HOG000007054 HOVERGEN:HBG108465
            InParanoid:A6H6W9 OMA:DNTKISC OrthoDB:EOG4N8R5F NextBio:20867698
            Uniprot:A6H6W9
        Length = 328

 Score = 114 (45.2 bits), Expect = 6.0e-05, P = 6.0e-05
 Identities = 36/175 (20%), Positives = 79/175 (45%)

Query:     9 VGLREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQ 68
             V ++EQ+Y++++  ++ +L +++ G  +EY   ++KL    + R   A +  Q +   V+
Sbjct:    66 VEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERIRNAELFLQLETEQVE 125

Query:    69 NQYNAEEQATRQNLENEKSLLYDHMXXXXXXXXXXXXXDRNSVDINADLWFFEH-NKRGS 127
               Y  E++A  +  E++K  L +++             ++ ++++  D    +    R  
Sbjct:   126 RNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKL 185

Query:   128 NQNPLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMSQRK 182
              + P      P        RRK        + Y+L DE+I+ED   + K  S ++
Sbjct:   186 RRRPNDPVPIPD------KRRKPAPAQ---LNYLLTDEQIMEDLRTLNKLKSPKR 231


>UNIPROTKB|Q9H7L9 [details] [associations]
            symbol:SUDS3 "Sin3 histone deacetylase corepressor complex
            component SDS3" species:9606 "Homo sapiens" [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006915 "apoptotic
            process" evidence=IEA] [GO:0042803 "protein homodimerization
            activity" evidence=IEA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0042826 "histone
            deacetylase binding" evidence=ISS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0016580 "Sin3 complex" evidence=ISS] [GO:0019899
            "enzyme binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0043065 "positive regulation of apoptotic process"
            evidence=IMP] [GO:0004407 "histone deacetylase activity"
            evidence=IDA] [GO:0016575 "histone deacetylation" evidence=IDA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] Pfam:PF08598 GO:GO:0006351
            GO:GO:0000122 GO:GO:0043065 GO:GO:0042826 GO:GO:0016575
            InterPro:IPR013907 GO:GO:0016580 CTD:64426 eggNOG:NOG311652
            HOGENOM:HOG000007054 HOVERGEN:HBG108465 OrthoDB:EOG4N8R5F
            EMBL:AK024460 EMBL:BC030252 EMBL:BC098404 EMBL:AK023801
            IPI:IPI00607645 RefSeq:NP_071936.2 UniGene:Hs.416630
            UniGene:Hs.602312 ProteinModelPortal:Q9H7L9 IntAct:Q9H7L9
            STRING:Q9H7L9 PhosphoSite:Q9H7L9 DMDM:68053233 PaxDb:Q9H7L9
            PRIDE:Q9H7L9 Ensembl:ENST00000543473 GeneID:64426 KEGG:hsa:64426
            UCSC:uc001twz.3 GeneCards:GC12P118814 HGNC:HGNC:29545 MIM:608250
            neXtProt:NX_Q9H7L9 PharmGKB:PA143485626 InParanoid:Q9H7L9
            ChiTaRS:SUDS3 GenomeRNAi:64426 NextBio:66429 ArrayExpress:Q9H7L9
            Bgee:Q9H7L9 CleanEx:HS_SUDS3 Genevestigator:Q9H7L9
            GermOnline:ENSG00000111707 Uniprot:Q9H7L9
        Length = 328

 Score = 114 (45.2 bits), Expect = 6.0e-05, P = 6.0e-05
 Identities = 36/175 (20%), Positives = 79/175 (45%)

Query:     9 VGLREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQ 68
             V ++EQ+Y++++  ++ +L +++ G  +EY   ++KL    + R   A +  Q +   V+
Sbjct:    66 VEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERIRNAELFLQLETEQVE 125

Query:    69 NQYNAEEQATRQNLENEKSLLYDHMXXXXXXXXXXXXXDRNSVDINADLWFFEH-NKRGS 127
               Y  E++A  +  E++K  L +++             ++ ++++  D    +    R  
Sbjct:   126 RNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKL 185

Query:   128 NQNPLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMSQRK 182
              + P      P        RRK        + Y+L DE+I+ED   + K  S ++
Sbjct:   186 RRRPNDPVPIPD------KRRKPAPAQ---LNYLLTDEQIMEDLRTLNKLKSPKR 231


>UNIPROTKB|Q5RBB8 [details] [associations]
            symbol:SUDS3 "Sin3 histone deacetylase corepressor complex
            component SDS3" species:9601 "Pongo abelii" [GO:0005634 "nucleus"
            evidence=ISS] [GO:0016575 "histone deacetylation" evidence=ISS]
            [GO:0043065 "positive regulation of apoptotic process"
            evidence=ISS] [GO:0004407 "histone deacetylase activity"
            evidence=ISS] Pfam:PF08598 GO:GO:0005634 GO:GO:0006355
            GO:GO:0006351 GO:GO:0043065 GO:GO:0016575 InterPro:IPR013907
            CTD:64426 HOVERGEN:HBG108465 EMBL:CR858733 RefSeq:NP_001125541.1
            UniGene:Pab.1416 PRIDE:Q5RBB8 GeneID:100172453 KEGG:pon:100172453
            Uniprot:Q5RBB8
        Length = 328

 Score = 114 (45.2 bits), Expect = 6.0e-05, P = 6.0e-05
 Identities = 36/175 (20%), Positives = 79/175 (45%)

Query:     9 VGLREQLYRERIVEVESKLNEVELGQAKEYLLPLQKLQDNMRIRTEVAAILRQYKLNNVQ 68
             V ++EQ+Y++++  ++ +L +++ G  +EY   ++KL    + R   A +  Q +   V+
Sbjct:    66 VEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERIRNAELFLQLETEQVE 125

Query:    69 NQYNAEEQATRQNLENEKSLLYDHMXXXXXXXXXXXXXDRNSVDINADLWFFEH-NKRGS 127
               Y  E++A  +  E++K  L +++             ++ ++++  D    +    R  
Sbjct:   126 RNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKL 185

Query:   128 NQNPLSSKRGPKGFNRMKSRRKAVTVSGPYIVYMLRDEEIIEDWTIIKKAMSQRK 182
              + P      P        RRK        + Y+L DE+I+ED   + K  S ++
Sbjct:   186 RRRPNDPVPIPD------KRRKPAPAQ---LNYLLTDEQIMEDLRTLNKLKSPKR 231


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.133   0.379    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      187       174   0.00075  109 3  11 22  0.42    32
                                                     31  0.49    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  22
  No. of states in DFA:  589 (63 KB)
  Total size of DFA:  149 KB (2090 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  17.81u 0.10s 17.91t   Elapsed:  00:00:11
  Total cpu time:  17.81u 0.10s 17.91t   Elapsed:  00:00:12
  Start:  Thu Aug 15 10:59:26 2013   End:  Thu Aug 15 10:59:38 2013

the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with BRMS1L BRMS1L BRMS1L Breast cancer metastasis-suppressor 1-like protein	protein from Gallus gallus	2.0e-33
BLAST match view associations BLAST with BRMS1L BRMS1L BRMS1L Breast cancer metastasis-suppressor 1-like protein	protein from Bos taurus	2.0e-33
BLAST match view associations BLAST with BRMS1L BRMS1L BRMS1L Breast cancer metastasis-suppressor 1-like protein	protein from Homo sapiens	2.0e-33
BLAST match view associations BLAST with Brms1l Brms1l Brms1l breast cancer metastasis-suppressor 1-like	protein from Mus musculus	2.0e-33
BLAST match view associations BLAST with brms1la brms1la brms1la breast cancer metastasis-suppressor 1-like a	gene_product from Danio rerio	2.9e-32
BLAST match view associations BLAST with CG4400 CG4400 CG4400	protein from Drosophila melanogaster	5.6e-29
BLAST match view associations BLAST with LOC100518234 LOC100518234 LOC100518234 Uncharacterized protein	protein from Sus scrofa	3.2e-26
BLAST match view associations BLAST with Brms1 Brms1 Brms1 breast cancer metastasis-suppressor 1	gene from Rattus norvegicus	3.2e-26
BLAST match view associations BLAST with Brms1 Brms1 Brms1 breast cancer metastasis-suppressor 1	protein from Mus musculus	4.0e-26
BLAST match view associations BLAST with BRMS1 BRMS1 BRMS1 Breast cancer metastasis-suppressor 1 homolog	protein from Bos taurus	5.2e-26
BLAST match view associations BLAST with BRMS1 BRMS1 BRMS1 Breast cancer metastasis-suppressor 1	protein from Homo sapiens	8.4e-26
BLAST match view associations BLAST with BRMS1 BRMS1 BRMS1 Breast cancer metastasis-suppressor 1	protein from Homo sapiens	8.4e-26
BLAST match view associations BLAST with BRMS1 BRMS1 BRMS1 Breast cancer metastasis-suppressor 1	protein from Homo sapiens	8.4e-26
BLAST match view associations BLAST with BRMS1 BRMS1 BRMS1 Uncharacterized protein	protein from Canis lupus familiaris	7.6e-25
BLAST match view associations BLAST with Suds3 Suds3 Suds3 suppressor of defective silencing 3 homolog (S. cerevisiae)	gene from Rattus norvegicus	2.4e-06
BLAST match view associations BLAST with CG14220 CG14220 CG14220	protein from Drosophila melanogaster	3.4e-06
BLAST match view associations BLAST with Suds3 Suds3 Suds3 suppressor of defective silencing 3 homolog (S. cerevisiae)	protein from Mus musculus	2.2e-05
BLAST match view associations BLAST with SUDS3 SUDS3 SUDS3 Uncharacterized protein	protein from Sus scrofa	6.0e-05
BLAST match view associations BLAST with SUDS3 SUDS3 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3	protein from Bos taurus	6.0e-05
BLAST match view associations BLAST with SUDS3 SUDS3 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3	protein from Homo sapiens	6.0e-05
BLAST match view associations BLAST with SUDS3 SUDS3 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3	protein from Pongo abelii	6.0e-05