Query psy15421
Match_columns 340
No_of_seqs 219 out of 2366
Neff 10.7
Searched_HMMs 29240
Date Fri Aug 16 20:35:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15421.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15421hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1got_B GT-beta; complex (GTP-b 100.0 3.6E-62 1.2E-66 429.7 51.5 340 1-340 1-340 (340)
2 2pbi_B Guanine nucleotide-bind 100.0 2.3E-57 7.9E-62 401.2 49.2 337 4-340 13-354 (354)
3 3iz6_a 40S ribosomal protein R 100.0 3.2E-55 1.1E-59 391.2 35.7 335 6-340 13-372 (380)
4 1vyh_C Platelet-activating fac 100.0 1.5E-53 5.3E-58 384.1 41.9 287 48-340 101-408 (410)
5 3ow8_A WD repeat-containing pr 100.0 3.2E-51 1.1E-55 357.1 43.5 287 48-340 25-318 (321)
6 2ynn_A Coatomer subunit beta'; 100.0 8.8E-50 3E-54 345.4 42.1 286 46-337 4-297 (304)
7 3frx_A Guanine nucleotide-bind 100.0 7.5E-49 2.6E-53 341.9 44.8 287 45-340 7-314 (319)
8 4ery_A WD repeat-containing pr 100.0 3.8E-48 1.3E-52 336.1 45.9 293 44-340 12-309 (312)
9 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.2E-48 4E-53 344.3 42.7 292 46-340 6-332 (345)
10 2xzm_R RACK1; ribosome, transl 100.0 1.6E-47 5.6E-52 336.7 43.9 288 43-340 9-337 (343)
11 2hes_X YDR267CP; beta-propelle 100.0 1.3E-47 4.4E-52 335.6 41.6 291 46-340 5-325 (330)
12 4gqb_B Methylosome protein 50; 100.0 4E-48 1.4E-52 340.3 37.4 284 52-340 27-328 (344)
13 4g56_B MGC81050 protein; prote 100.0 3.9E-48 1.3E-52 342.5 35.8 287 50-340 37-340 (357)
14 1nr0_A Actin interacting prote 100.0 2.7E-47 9.2E-52 360.2 41.8 287 49-340 141-564 (611)
15 1erj_A Transcriptional repress 100.0 2.1E-46 7.3E-51 335.6 43.8 280 53-340 62-386 (393)
16 4aow_A Guanine nucleotide-bind 100.0 9.8E-46 3.3E-50 323.9 46.6 290 43-340 26-334 (340)
17 1nr0_A Actin interacting prote 100.0 6.9E-46 2.4E-50 350.5 43.1 286 47-340 51-352 (611)
18 2ymu_A WD-40 repeat protein; u 100.0 1.5E-45 5.3E-50 345.6 45.0 283 46-340 294-577 (577)
19 3zwl_B Eukaryotic translation 100.0 1.9E-44 6.4E-49 318.8 44.7 286 47-340 24-343 (369)
20 3dm0_A Maltose-binding peripla 100.0 9.1E-45 3.1E-49 347.9 44.4 287 46-340 373-690 (694)
21 1sq9_A Antiviral protein SKI8; 100.0 1.2E-44 4.2E-49 323.9 38.9 293 45-340 6-392 (397)
22 2ymu_A WD-40 repeat protein; u 100.0 1.1E-43 3.8E-48 333.0 45.6 283 46-340 253-536 (577)
23 1gxr_A ESG1, transducin-like e 100.0 3.2E-43 1.1E-47 307.2 45.3 286 47-340 43-334 (337)
24 3odt_A Protein DOA1; ubiquitin 100.0 1.3E-43 4.4E-48 306.7 40.7 283 46-340 9-293 (313)
25 3ei3_B DNA damage-binding prot 100.0 3.5E-44 1.2E-48 319.9 37.9 288 46-340 64-379 (383)
26 2ynn_A Coatomer subunit beta'; 100.0 6.5E-44 2.2E-48 308.6 37.5 248 88-340 4-256 (304)
27 1r5m_A SIR4-interacting protei 100.0 1.6E-43 5.4E-48 318.7 39.5 279 54-340 107-422 (425)
28 3gre_A Serine/threonine-protei 100.0 2.3E-44 7.7E-49 326.6 33.5 295 44-340 51-437 (437)
29 1k8k_C P40, ARP2/3 complex 41 100.0 3.4E-43 1.1E-47 311.6 38.6 285 51-340 4-358 (372)
30 3ow8_A WD repeat-containing pr 100.0 7.4E-43 2.5E-47 304.2 39.3 247 47-299 72-319 (321)
31 3k26_A Polycomb protein EED; W 100.0 8.1E-44 2.8E-48 314.5 30.9 284 49-340 12-363 (366)
32 1vyh_C Platelet-activating fac 100.0 7.1E-43 2.4E-47 314.5 35.7 247 47-299 142-409 (410)
33 3i2n_A WD repeat-containing pr 100.0 9E-43 3.1E-47 306.9 35.0 289 48-340 11-350 (357)
34 4aez_A CDC20, WD repeat-contai 100.0 2.8E-42 9.4E-47 309.7 38.6 280 51-340 87-377 (401)
35 4e54_B DNA damage-binding prot 100.0 2.7E-43 9.2E-48 319.7 31.4 288 49-340 113-427 (435)
36 2pm9_A Protein WEB1, protein t 100.0 1.4E-43 5E-48 318.7 28.6 287 52-340 64-411 (416)
37 4g56_B MGC81050 protein; prote 100.0 2.2E-43 7.6E-48 312.0 28.7 275 61-340 11-298 (357)
38 4gga_A P55CDC, cell division c 100.0 1.7E-41 5.9E-46 306.4 41.0 273 58-340 108-392 (420)
39 4h5i_A Guanine nucleotide-exch 100.0 8E-43 2.7E-47 309.3 31.5 281 56-340 15-340 (365)
40 4gqb_B Methylosome protein 50; 100.0 6.4E-42 2.2E-46 300.8 36.2 243 53-303 80-333 (344)
41 3dwl_C Actin-related protein 2 100.0 4.1E-44 1.4E-48 318.6 22.3 286 50-340 6-376 (377)
42 4ggc_A P55CDC, cell division c 100.0 6.5E-41 2.2E-45 290.6 40.6 273 58-340 28-312 (318)
43 2j04_B YDR362CP, TAU91; beta p 100.0 1.4E-43 4.6E-48 326.8 24.8 285 54-340 132-514 (524)
44 2pm9_A Protein WEB1, protein t 100.0 3.4E-43 1.2E-47 316.3 26.6 286 54-340 11-334 (416)
45 1r5m_A SIR4-interacting protei 100.0 1.6E-41 5.5E-46 305.6 37.6 280 52-340 42-358 (425)
46 2pm7_B Protein transport prote 100.0 1.8E-41 6.1E-46 292.3 36.2 250 49-300 3-284 (297)
47 3frx_A Guanine nucleotide-bind 100.0 5.6E-41 1.9E-45 292.1 39.0 248 47-301 57-317 (319)
48 3vl1_A 26S proteasome regulato 100.0 1.7E-42 5.8E-47 312.4 28.1 277 57-340 58-362 (420)
49 4a11_B DNA excision repair pro 100.0 6.3E-41 2.2E-45 300.3 38.2 289 47-340 35-362 (408)
50 1gxr_A ESG1, transducin-like e 100.0 5.1E-41 1.7E-45 293.2 36.4 282 54-340 8-293 (337)
51 3v7d_B Cell division control p 100.0 4E-40 1.4E-44 301.0 41.9 285 46-339 153-459 (464)
52 1yfq_A Cell cycle arrest prote 100.0 1.9E-41 6.6E-46 297.0 31.1 277 49-335 5-315 (342)
53 1got_B GT-beta; complex (GTP-b 100.0 4.9E-40 1.7E-44 288.7 39.7 246 88-340 46-298 (340)
54 3sfz_A APAF-1, apoptotic pepti 100.0 1.7E-40 5.8E-45 337.1 41.5 287 48-340 608-910 (1249)
55 3mkq_A Coatomer beta'-subunit; 100.0 1.2E-40 4.2E-45 324.3 38.9 287 46-339 4-298 (814)
56 3v7d_B Cell division control p 100.0 5.9E-40 2E-44 299.8 41.0 279 47-340 113-418 (464)
57 2ovr_B FBW7, F-BOX/WD repeat p 100.0 9.3E-40 3.2E-44 297.2 41.8 280 46-340 150-439 (445)
58 3dw8_B Serine/threonine-protei 100.0 1.8E-40 6.3E-45 301.4 36.7 283 54-339 27-442 (447)
59 1pgu_A Actin interacting prote 100.0 2.2E-40 7.7E-45 312.3 38.5 288 45-340 193-611 (615)
60 1p22_A F-BOX/WD-repeat protein 100.0 2.2E-40 7.5E-45 300.5 36.9 271 51-340 129-411 (435)
61 2hes_X YDR267CP; beta-propelle 100.0 3.1E-40 1.1E-44 288.8 36.3 252 48-301 49-328 (330)
62 2pm7_B Protein transport prote 100.0 3E-40 1E-44 284.6 35.2 246 91-340 3-282 (297)
63 3bg1_A Protein SEC13 homolog; 100.0 1.2E-41 4.2E-46 295.9 26.7 248 48-340 6-290 (316)
64 3f3f_A Nucleoporin SEH1; struc 100.0 1.3E-40 4.4E-45 291.3 33.2 291 48-340 4-334 (351)
65 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.3E-40 1.1E-44 290.4 35.9 251 89-340 7-280 (345)
66 3vl1_A 26S proteasome regulato 100.0 1.2E-40 4.1E-45 300.3 33.4 283 51-340 94-416 (420)
67 2oaj_A Protein SNI1; WD40 repe 100.0 4E-40 1.4E-44 322.6 38.3 165 52-219 55-246 (902)
68 2xzm_R RACK1; ribosome, transl 100.0 8.7E-40 3E-44 287.4 36.2 251 47-302 68-341 (343)
69 3sfz_A APAF-1, apoptotic pepti 100.0 1.1E-39 3.7E-44 331.2 41.2 291 46-340 648-1031(1249)
70 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6E-39 2.1E-43 291.8 41.5 275 47-340 110-388 (445)
71 2pbi_B Guanine nucleotide-bind 100.0 4.7E-39 1.6E-43 284.0 37.7 246 47-298 98-354 (354)
72 4ery_A WD repeat-containing pr 100.0 1.1E-38 3.7E-43 276.6 39.1 247 89-340 15-265 (312)
73 1pgu_A Actin interacting prote 100.0 5.8E-39 2E-43 302.7 39.8 283 46-340 54-363 (615)
74 3mmy_A MRNA export factor; mRN 100.0 7.1E-39 2.4E-43 282.8 36.9 286 46-339 30-342 (368)
75 3iz6_a 40S ribosomal protein R 100.0 3.7E-40 1.3E-44 293.8 26.7 257 78-340 47-326 (380)
76 1erj_A Transcriptional repress 100.0 5.9E-38 2E-42 280.9 37.6 238 57-301 125-389 (393)
77 3jrp_A Fusion protein of prote 100.0 1.4E-38 4.9E-43 282.2 33.4 251 48-300 4-286 (379)
78 2oaj_A Protein SNI1; WD40 repe 100.0 1.5E-38 5.1E-43 311.5 34.9 204 51-262 13-247 (902)
79 2aq5_A Coronin-1A; WD40 repeat 100.0 6.6E-39 2.3E-43 287.8 27.7 281 57-340 36-339 (402)
80 3dm0_A Maltose-binding peripla 100.0 1.1E-37 3.6E-42 298.9 36.9 251 47-300 422-692 (694)
81 3mkq_A Coatomer beta'-subunit; 100.0 2.9E-37 1E-41 300.5 39.7 289 45-340 45-383 (814)
82 3jrp_A Fusion protein of prote 100.0 2.7E-37 9.3E-42 273.9 34.5 251 88-340 2-284 (379)
83 4aow_A Guanine nucleotide-bind 100.0 1.1E-36 3.8E-41 266.4 37.6 252 47-303 78-339 (340)
84 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.2E-36 4.1E-41 277.1 36.1 279 56-339 5-387 (450)
85 2j04_B YDR362CP, TAU91; beta p 100.0 2.4E-38 8.2E-43 291.9 25.0 230 109-340 173-425 (524)
86 3vu4_A KMHSV2; beta-propeller 100.0 1.2E-36 4E-41 268.7 34.6 277 49-340 13-333 (355)
87 1sq9_A Antiviral protein SKI8; 100.0 2.3E-36 7.8E-41 270.2 33.2 256 47-302 54-396 (397)
88 3dwl_C Actin-related protein 2 100.0 4.2E-38 1.4E-42 279.8 21.6 242 93-339 7-278 (377)
89 4aez_A CDC20, WD repeat-contai 100.0 6.3E-36 2.1E-40 268.4 35.8 254 49-308 127-387 (401)
90 3jro_A Fusion protein of prote 100.0 5.4E-37 1.8E-41 296.1 29.6 251 49-301 3-285 (753)
91 4gga_A P55CDC, cell division c 100.0 1.9E-35 6.5E-40 266.8 37.6 265 50-322 142-416 (420)
92 1k8k_C P40, ARP2/3 complex 41 100.0 1E-35 3.5E-40 263.4 34.1 256 47-303 44-363 (372)
93 3lrv_A PRE-mRNA-splicing facto 100.0 6.2E-37 2.1E-41 269.2 25.8 269 61-339 42-329 (343)
94 3gre_A Serine/threonine-protei 100.0 2.4E-37 8.3E-42 280.4 23.4 267 63-340 35-356 (437)
95 3k26_A Polycomb protein EED; W 100.0 1E-36 3.4E-41 269.0 26.4 241 54-300 68-365 (366)
96 3zwl_B Eukaryotic translation 100.0 5.8E-35 2E-39 257.8 36.0 256 45-304 64-349 (369)
97 3dw8_B Serine/threonine-protei 100.0 3.7E-36 1.3E-40 273.0 28.4 243 96-340 27-370 (447)
98 3ei3_B DNA damage-binding prot 100.0 1.7E-35 5.7E-40 263.7 32.2 250 82-340 58-336 (383)
99 2w18_A PALB2, fancn, partner a 100.0 5.1E-35 1.7E-39 249.7 33.2 277 58-340 42-354 (356)
100 2j04_A TAU60, YPL007P, hypothe 100.0 1.4E-36 4.6E-41 275.2 24.8 258 55-340 15-294 (588)
101 3i2n_A WD repeat-containing pr 100.0 1.5E-35 5.1E-40 260.8 29.8 244 91-340 12-288 (357)
102 2xyi_A Probable histone-bindin 100.0 7.3E-35 2.5E-39 263.9 32.3 248 91-340 122-407 (430)
103 3odt_A Protein DOA1; ubiquitin 100.0 5E-34 1.7E-38 246.5 35.4 246 46-306 50-301 (313)
104 1p22_A F-BOX/WD-repeat protein 100.0 1.7E-34 5.8E-39 261.8 33.7 261 46-321 164-433 (435)
105 1yfq_A Cell cycle arrest prote 100.0 2.4E-35 8.2E-40 258.2 27.2 242 93-340 7-279 (342)
106 2xyi_A Probable histone-bindin 100.0 7.9E-35 2.7E-39 263.6 31.1 251 49-301 122-410 (430)
107 4gq1_A NUP37; propeller, trans 100.0 9.3E-36 3.2E-40 266.6 23.8 279 58-336 18-383 (393)
108 3jro_A Fusion protein of prote 100.0 6.5E-35 2.2E-39 281.6 30.5 248 91-340 3-282 (753)
109 3bws_A Protein LP49; two-domai 100.0 1.2E-33 4.3E-38 255.5 36.9 283 47-340 115-429 (433)
110 2j04_A TAU60, YPL007P, hypothe 100.0 1.4E-35 4.9E-40 268.5 22.1 250 53-332 83-350 (588)
111 4h5i_A Guanine nucleotide-exch 100.0 3.4E-34 1.2E-38 253.8 29.0 244 49-300 67-342 (365)
112 2aq5_A Coronin-1A; WD40 repeat 100.0 3.7E-34 1.3E-38 256.9 29.4 250 49-304 75-345 (402)
113 4ggc_A P55CDC, cell division c 100.0 9.8E-33 3.3E-37 239.0 36.7 246 50-303 62-317 (318)
114 4e54_B DNA damage-binding prot 100.0 3.1E-34 1.1E-38 260.0 27.5 248 90-340 112-384 (435)
115 1l0q_A Surface layer protein; 100.0 2.7E-32 9.3E-37 243.5 39.1 261 68-340 3-272 (391)
116 4a11_B DNA excision repair pro 100.0 6.2E-33 2.1E-37 248.3 32.6 279 52-340 96-402 (408)
117 3mmy_A MRNA export factor; mRN 100.0 9.9E-33 3.4E-37 243.4 31.4 254 81-340 23-301 (368)
118 3bg1_A Protein SEC13 homolog; 100.0 4.8E-33 1.7E-37 241.7 25.8 209 47-256 49-292 (316)
119 3lrv_A PRE-mRNA-splicing facto 100.0 4E-33 1.4E-37 244.9 24.9 226 105-340 44-289 (343)
120 3vu4_A KMHSV2; beta-propeller 100.0 2E-32 6.8E-37 241.6 28.1 242 81-340 3-268 (355)
121 1l0q_A Surface layer protein; 100.0 1.7E-30 5.8E-35 231.8 39.0 283 46-340 23-339 (391)
122 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.4E-31 8.1E-36 242.1 31.8 248 49-300 96-390 (450)
123 4gq1_A NUP37; propeller, trans 100.0 3.5E-32 1.2E-36 243.4 23.2 237 56-299 90-387 (393)
124 3f3f_A Nucleoporin SEH1; struc 100.0 7.3E-31 2.5E-35 229.3 30.0 239 92-330 6-278 (351)
125 3bws_A Protein LP49; two-domai 100.0 4.1E-29 1.4E-33 225.8 36.1 281 54-340 59-387 (433)
126 2w18_A PALB2, fancn, partner a 100.0 6.9E-30 2.4E-34 218.1 28.9 247 44-299 75-355 (356)
127 2hqs_A Protein TOLB; TOLB, PAL 100.0 1E-28 3.6E-33 222.3 26.8 275 54-340 61-384 (415)
128 1nir_A Nitrite reductase; hemo 100.0 2.6E-27 8.9E-32 219.8 36.3 284 47-340 171-511 (543)
129 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.3E-27 4.5E-32 215.1 29.1 264 49-325 111-410 (415)
130 1nir_A Nitrite reductase; hemo 100.0 4.7E-27 1.6E-31 218.0 31.3 270 63-340 145-455 (543)
131 2ecf_A Dipeptidyl peptidase IV 100.0 2.5E-27 8.5E-32 228.5 29.1 281 55-340 36-410 (741)
132 1ri6_A Putative isomerase YBHE 100.0 6.6E-26 2.3E-30 198.0 32.2 269 69-340 7-305 (343)
133 3u4y_A Uncharacterized protein 100.0 2.3E-25 8E-30 194.0 34.7 271 62-340 4-301 (331)
134 3vgz_A Uncharacterized protein 100.0 1.4E-24 4.7E-29 190.5 37.0 269 55-333 40-334 (353)
135 1xfd_A DIP, dipeptidyl aminope 100.0 8.3E-27 2.8E-31 224.2 23.1 280 57-340 18-390 (723)
136 3o4h_A Acylamino-acid-releasin 99.9 1.4E-25 4.9E-30 210.5 27.5 268 55-340 21-312 (582)
137 2ojh_A Uncharacterized protein 99.9 2.2E-25 7.6E-30 190.1 26.3 252 72-334 17-293 (297)
138 1k32_A Tricorn protease; prote 99.9 3.2E-25 1.1E-29 221.4 30.1 286 48-340 45-458 (1045)
139 1pby_B Quinohemoprotein amine 99.9 8.3E-25 2.8E-29 190.5 28.0 261 68-340 2-307 (337)
140 1k32_A Tricorn protease; prote 99.9 1.7E-24 5.6E-29 216.2 29.5 278 48-340 196-499 (1045)
141 2ecf_A Dipeptidyl peptidase IV 99.9 4.9E-24 1.7E-28 205.5 27.7 265 57-332 110-444 (741)
142 2ojh_A Uncharacterized protein 99.9 5.3E-24 1.8E-28 181.5 24.7 240 48-292 34-293 (297)
143 2z3z_A Dipeptidyl aminopeptida 99.9 2.1E-23 7.3E-28 200.0 31.0 273 56-340 82-432 (706)
144 2z3z_A Dipeptidyl aminopeptida 99.9 6.8E-24 2.3E-28 203.5 26.7 265 58-333 28-376 (706)
145 1ri6_A Putative isomerase YBHE 99.9 2.6E-22 9E-27 175.0 33.6 266 53-325 35-335 (343)
146 3hfq_A Uncharacterized protein 99.9 4E-22 1.4E-26 174.8 32.9 262 75-339 14-313 (347)
147 3scy_A Hypothetical bacterial 99.9 6.7E-22 2.3E-26 174.4 34.4 264 74-339 24-333 (361)
148 3u4y_A Uncharacterized protein 99.9 9.9E-22 3.4E-26 171.0 33.8 270 47-324 32-326 (331)
149 1xfd_A DIP, dipeptidyl aminope 99.9 7.5E-23 2.6E-27 196.7 25.3 275 48-330 50-427 (723)
150 3pe7_A Oligogalacturonate lyas 99.9 2.9E-22 9.9E-27 178.2 26.8 286 47-339 22-378 (388)
151 3scy_A Hypothetical bacterial 99.9 2.4E-20 8.3E-25 164.4 35.7 263 54-321 48-360 (361)
152 1jmx_B Amine dehydrogenase; ox 99.9 2.9E-21 9.9E-26 168.9 29.5 259 60-340 4-322 (349)
153 2oit_A Nucleoporin 214KDA; NH2 99.9 3.7E-22 1.3E-26 180.3 24.2 202 55-258 36-279 (434)
154 1pby_B Quinohemoprotein amine 99.9 2E-21 6.7E-26 169.1 27.6 242 57-311 35-320 (337)
155 3hfq_A Uncharacterized protein 99.9 1.1E-20 3.9E-25 165.5 32.2 250 51-304 35-322 (347)
156 3vgz_A Uncharacterized protein 99.9 1.1E-20 3.8E-25 165.6 31.7 236 98-340 41-300 (353)
157 2oit_A Nucleoporin 214KDA; NH2 99.9 3.5E-22 1.2E-26 180.5 22.5 217 77-302 23-279 (434)
158 1z68_A Fibroblast activation p 99.9 1.6E-22 5.4E-27 194.4 18.9 273 60-340 20-388 (719)
159 3o4h_A Acylamino-acid-releasin 99.9 9.1E-22 3.1E-26 184.6 23.0 230 97-340 21-273 (582)
160 1jof_A Carboxy-CIS,CIS-muconat 99.9 1.6E-19 5.4E-24 159.6 30.4 267 70-340 5-338 (365)
161 1z68_A Fibroblast activation p 99.9 5.8E-21 2E-25 183.5 19.2 284 48-340 49-440 (719)
162 3c5m_A Oligogalacturonate lyas 99.9 4E-20 1.4E-24 164.6 22.5 271 58-339 38-378 (396)
163 3fvz_A Peptidyl-glycine alpha- 99.9 8E-19 2.7E-23 152.8 29.0 249 55-340 23-319 (329)
164 3azo_A Aminopeptidase; POP fam 99.9 1.4E-19 4.8E-24 172.3 25.2 284 50-339 18-363 (662)
165 1q7f_A NHL, brain tumor CG1071 99.9 5.9E-18 2E-22 144.1 32.3 234 97-340 29-277 (286)
166 4a5s_A Dipeptidyl peptidase 4 99.8 1.7E-19 6E-24 173.8 24.4 268 56-332 17-383 (740)
167 1jof_A Carboxy-CIS,CIS-muconat 99.8 2E-18 7E-23 152.5 26.5 247 54-302 38-342 (365)
168 1q7f_A NHL, brain tumor CG1071 99.8 4.8E-17 1.6E-21 138.5 34.0 241 52-302 26-281 (286)
169 1jmx_B Amine dehydrogenase; ox 99.8 4.6E-18 1.6E-22 148.5 28.2 254 48-310 34-334 (349)
170 2oiz_A Aromatic amine dehydrog 99.8 7.8E-18 2.7E-22 148.4 28.5 264 48-325 44-360 (361)
171 2oiz_A Aromatic amine dehydrog 99.8 1.2E-17 4E-22 147.3 27.8 255 75-340 29-331 (361)
172 2dg1_A DRP35, lactonase; beta 99.8 1.3E-17 4.4E-22 145.2 27.4 268 56-333 6-300 (333)
173 2z2n_A Virginiamycin B lyase; 99.8 2.8E-15 9.6E-20 127.9 40.2 278 50-338 9-291 (299)
174 2gop_A Trilobed protease; beta 99.8 3.3E-16 1.1E-20 136.9 31.2 254 56-339 15-327 (347)
175 3e5z_A Putative gluconolactona 99.8 1.2E-15 4E-20 130.6 31.2 241 50-303 22-288 (296)
176 3pe7_A Oligogalacturonate lyas 99.8 9.7E-17 3.3E-21 142.5 24.6 253 82-340 15-326 (388)
177 3azo_A Aminopeptidase; POP fam 99.8 1E-16 3.5E-21 152.5 25.6 255 49-311 61-379 (662)
178 4a5s_A Dipeptidyl peptidase 4 99.8 1.8E-17 6E-22 159.8 20.5 227 100-335 19-343 (740)
179 3e5z_A Putative gluconolactona 99.8 1.7E-15 5.9E-20 129.5 29.0 235 90-338 20-282 (296)
180 2qc5_A Streptogramin B lactona 99.8 1.1E-13 3.8E-18 117.9 38.9 276 51-338 15-295 (300)
181 1rwi_B Serine/threonine-protei 99.7 1.7E-15 5.9E-20 127.5 26.7 235 99-340 25-261 (270)
182 2xdw_A Prolyl endopeptidase; a 99.7 2.5E-15 8.7E-20 144.1 31.1 247 53-303 122-416 (710)
183 3c5m_A Oligogalacturonate lyas 99.7 2.1E-16 7.3E-21 140.4 19.9 241 82-331 15-301 (396)
184 3dsm_A Uncharacterized protein 99.7 7.3E-15 2.5E-19 127.7 29.1 255 75-340 15-299 (328)
185 2xdw_A Prolyl endopeptidase; a 99.7 6.6E-15 2.3E-19 141.2 30.5 236 98-340 125-411 (710)
186 2gop_A Trilobed protease; beta 99.7 5.1E-15 1.8E-19 129.3 27.3 234 56-313 59-341 (347)
187 2dg1_A DRP35, lactonase; beta 99.7 6.8E-14 2.3E-18 121.5 34.1 242 46-292 35-301 (333)
188 2bkl_A Prolyl endopeptidase; m 99.7 3E-16 1E-20 150.1 20.9 247 53-304 118-400 (695)
189 1rwi_B Serine/threonine-protei 99.7 8E-15 2.7E-19 123.4 25.7 239 57-302 25-265 (270)
190 3dsm_A Uncharacterized protein 99.7 3.9E-14 1.3E-18 123.0 29.8 243 56-309 44-309 (328)
191 2bkl_A Prolyl endopeptidase; m 99.7 3.3E-15 1.1E-19 142.9 24.7 237 96-340 119-394 (695)
192 3no2_A Uncharacterized protein 99.7 5.7E-14 2E-18 118.8 29.1 216 65-289 3-231 (276)
193 1qks_A Cytochrome CD1 nitrite 99.7 6.5E-13 2.2E-17 123.2 38.4 280 57-340 198-535 (567)
194 2z2n_A Virginiamycin B lyase; 99.7 1E-12 3.4E-17 111.9 34.7 236 95-340 12-252 (299)
195 3no2_A Uncharacterized protein 99.7 1.2E-13 4E-18 116.9 28.1 213 108-331 4-231 (276)
196 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 2.4E-13 8.2E-18 116.9 29.0 238 98-340 18-296 (314)
197 1qks_A Cytochrome CD1 nitrite 99.7 1.1E-12 3.8E-17 121.6 35.1 269 65-340 165-474 (567)
198 1yr2_A Prolyl oligopeptidase; 99.6 1.2E-13 4.1E-18 133.1 26.5 246 54-304 161-444 (741)
199 3fvz_A Peptidyl-glycine alpha- 99.6 1.1E-13 3.8E-18 120.3 23.7 176 164-340 69-274 (329)
200 3hrp_A Uncharacterized protein 99.6 2.9E-12 1E-16 114.5 32.8 239 56-299 131-408 (409)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.6E-12 5.4E-17 111.7 29.4 242 52-301 14-299 (314)
202 2qc5_A Streptogramin B lactona 99.6 1.8E-11 6.2E-16 104.1 35.4 236 96-340 18-257 (300)
203 2mad_H Methylamine dehydrogena 99.6 1.9E-11 6.6E-16 107.8 36.2 266 64-340 29-347 (373)
204 1yr2_A Prolyl oligopeptidase; 99.6 2.2E-13 7.6E-18 131.2 25.6 267 65-340 116-438 (741)
205 1xip_A Nucleoporin NUP159; bet 99.6 1.1E-13 3.6E-18 121.7 18.8 172 145-331 39-232 (388)
206 2mad_H Methylamine dehydrogena 99.6 6.9E-11 2.4E-15 104.2 36.9 246 49-308 61-357 (373)
207 3g4e_A Regucalcin; six bladed 99.6 2.3E-11 8E-16 103.9 30.7 232 51-290 8-261 (297)
208 1xip_A Nucleoporin NUP159; bet 99.5 2.9E-13 1E-17 118.9 18.1 173 57-246 39-233 (388)
209 3g4e_A Regucalcin; six bladed 99.5 6.9E-11 2.3E-15 101.0 31.4 226 98-331 13-260 (297)
210 3hrp_A Uncharacterized protein 99.5 3.1E-11 1.1E-15 107.9 30.3 233 99-339 132-406 (409)
211 3sjl_D Methylamine dehydrogena 99.5 3.4E-11 1.2E-15 105.4 29.1 252 60-323 82-384 (386)
212 3sjl_D Methylamine dehydrogena 99.5 5E-11 1.7E-15 104.3 29.3 268 64-340 41-360 (386)
213 3iuj_A Prolyl endopeptidase; h 99.5 6.8E-12 2.3E-16 119.9 24.4 244 53-304 126-408 (693)
214 2qe8_A Uncharacterized protein 99.5 5.8E-12 2E-16 110.0 20.9 260 56-335 17-313 (343)
215 3dr2_A Exported gluconolactona 99.5 5.2E-11 1.8E-15 102.1 26.0 234 49-295 38-301 (305)
216 3c75_H MADH, methylamine dehyd 99.5 5.1E-11 1.7E-15 106.0 25.8 267 65-340 82-399 (426)
217 2ghs_A AGR_C_1268P; regucalcin 99.5 4.4E-10 1.5E-14 97.3 31.0 223 57-291 50-292 (326)
218 3c75_H MADH, methylamine dehyd 99.5 6.2E-11 2.1E-15 105.5 25.9 240 60-308 122-409 (426)
219 3dr2_A Exported gluconolactona 99.4 2.1E-10 7.1E-15 98.3 28.2 233 90-338 37-302 (305)
220 2ghs_A AGR_C_1268P; regucalcin 99.4 2.6E-10 9E-15 98.7 28.6 220 100-331 51-290 (326)
221 1yiq_A Quinohemoprotein alcoho 99.4 8.5E-11 2.9E-15 111.9 26.0 269 67-340 70-502 (689)
222 1kb0_A Quinohemoprotein alcoho 99.4 5.1E-11 1.8E-15 113.2 22.4 269 67-340 77-504 (677)
223 1mda_H Methylamine dehydrogena 99.3 1.8E-10 6E-15 100.9 20.8 257 46-322 57-366 (368)
224 2hz6_A Endoplasmic reticulum t 99.3 9.3E-13 3.2E-17 116.2 6.1 205 66-284 8-217 (369)
225 3q7m_A Lipoprotein YFGL, BAMB; 99.3 5.4E-09 1.8E-13 92.2 30.3 259 66-340 52-334 (376)
226 3iuj_A Prolyl endopeptidase; h 99.3 5.1E-10 1.7E-14 107.0 24.4 233 97-340 128-402 (693)
227 3q7m_A Lipoprotein YFGL, BAMB; 99.3 2.9E-09 9.8E-14 93.9 27.6 261 66-340 102-375 (376)
228 2qe8_A Uncharacterized protein 99.3 1.2E-10 4.1E-15 101.6 18.3 225 98-340 17-275 (343)
229 3hxj_A Pyrrolo-quinoline quino 99.3 3.4E-10 1.2E-14 97.8 19.8 262 54-338 58-319 (330)
230 1yiq_A Quinohemoprotein alcoho 99.3 1.8E-09 6.1E-14 102.8 26.0 258 67-328 121-533 (689)
231 1kb0_A Quinohemoprotein alcoho 99.2 1.5E-09 5.1E-14 103.1 23.4 258 67-328 128-535 (677)
232 2hz6_A Endoplasmic reticulum t 99.2 1.6E-12 5.5E-17 114.7 2.7 177 153-340 8-189 (369)
233 1mda_H Methylamine dehydrogena 99.2 2.8E-09 9.5E-14 93.3 21.8 244 78-340 47-343 (368)
234 3hxj_A Pyrrolo-quinoline quino 99.2 7.3E-10 2.5E-14 95.7 17.4 256 62-340 26-281 (330)
235 2ece_A 462AA long hypothetical 99.2 5.8E-08 2E-12 85.8 28.8 225 107-331 93-399 (462)
236 1kv9_A Type II quinohemoprotei 99.1 1.8E-08 6.2E-13 95.6 24.7 269 67-340 66-485 (668)
237 1npe_A Nidogen, entactin; glyc 99.0 3E-06 1E-10 70.7 31.7 239 77-325 10-263 (267)
238 2iwa_A Glutamine cyclotransfer 99.0 2.8E-07 9.7E-12 76.4 24.6 207 89-301 11-237 (266)
239 1k3i_A Galactose oxidase precu 99.0 5.8E-08 2E-12 92.1 22.9 270 60-332 190-530 (656)
240 2ece_A 462AA long hypothetical 99.0 1.3E-07 4.6E-12 83.5 23.2 220 65-289 93-399 (462)
241 2iwa_A Glutamine cyclotransfer 99.0 1.8E-06 6.1E-11 71.6 27.2 193 57-257 22-237 (266)
242 2ad6_A Methanol dehydrogenase 99.0 3.8E-07 1.3E-11 84.9 25.4 268 67-340 62-491 (571)
243 1fwx_A Nitrous oxide reductase 99.0 1.2E-07 4.1E-12 86.7 21.2 219 108-331 100-406 (595)
244 2fp8_A Strictosidine synthase; 98.9 2.7E-06 9.1E-11 73.2 28.3 241 52-300 15-312 (322)
245 1w6s_A Methanol dehydrogenase 98.9 1.1E-06 3.7E-11 81.9 26.2 196 67-265 62-350 (599)
246 3nol_A Glutamine cyclotransfer 98.9 9.6E-07 3.3E-11 72.5 22.4 184 143-331 42-243 (262)
247 3nok_A Glutaminyl cyclase; bet 98.9 5.3E-07 1.8E-11 74.0 20.5 181 144-331 55-253 (268)
248 2p4o_A Hypothetical protein; p 98.9 1.2E-05 4.1E-10 68.6 30.0 237 46-292 23-279 (306)
249 3nol_A Glutamine cyclotransfer 98.9 2.7E-06 9.2E-11 69.8 23.9 185 99-291 44-245 (262)
250 4a2l_A BT_4663, two-component 98.8 9.8E-05 3.4E-09 71.6 39.1 270 55-335 214-519 (795)
251 1kv9_A Type II quinohemoprotei 98.8 7.7E-07 2.6E-11 84.4 22.7 260 67-330 117-519 (668)
252 4a2l_A BT_4663, two-component 98.8 7.7E-05 2.6E-09 72.3 37.3 268 56-336 263-565 (795)
253 2fp8_A Strictosidine synthase; 98.8 2.6E-06 8.9E-11 73.2 23.8 231 100-339 21-309 (322)
254 2xbg_A YCF48-like protein; pho 98.8 4.7E-05 1.6E-09 65.6 35.7 271 55-339 35-318 (327)
255 1npe_A Nidogen, entactin; glyc 98.8 2.9E-05 9.9E-10 64.7 29.4 220 56-283 36-263 (267)
256 3mbr_X Glutamine cyclotransfer 98.8 1.8E-05 6.3E-10 64.3 26.9 190 47-246 11-223 (243)
257 3mbr_X Glutamine cyclotransfer 98.8 1E-05 3.5E-10 65.8 25.3 192 135-331 11-222 (243)
258 2p4o_A Hypothetical protein; p 98.8 2.5E-05 8.6E-10 66.5 29.2 223 98-332 32-277 (306)
259 2ad6_A Methanol dehydrogenase 98.8 8.2E-06 2.8E-10 75.9 27.5 256 67-329 115-523 (571)
260 1flg_A Protein (quinoprotein e 98.8 6.5E-06 2.2E-10 76.7 26.8 267 68-340 69-513 (582)
261 3nok_A Glutaminyl cyclase; bet 98.7 5.9E-06 2E-10 67.9 22.1 183 99-290 56-254 (268)
262 3v9f_A Two-component system se 98.7 0.00012 4.2E-09 70.7 35.3 276 56-340 258-565 (781)
263 1w6s_A Methanol dehydrogenase 98.7 1.9E-05 6.6E-10 73.6 26.8 253 70-329 124-533 (599)
264 3v9f_A Two-component system se 98.7 0.00015 5.1E-09 70.1 33.4 271 55-337 312-606 (781)
265 1fwx_A Nitrous oxide reductase 98.6 4.1E-06 1.4E-10 76.7 20.4 179 157-340 105-358 (595)
266 1flg_A Protein (quinoprotein e 98.6 0.00012 3.9E-09 68.3 29.0 257 67-328 117-544 (582)
267 3v64_C Agrin; beta propeller, 98.5 0.00033 1.1E-08 60.8 31.1 241 56-307 34-281 (349)
268 1k3i_A Galactose oxidase precu 98.4 8.4E-06 2.9E-10 77.3 17.6 230 57-290 244-530 (656)
269 3tc9_A Hypothetical hydrolase; 98.4 0.00065 2.2E-08 60.8 27.7 237 57-299 138-428 (430)
270 3tc9_A Hypothetical hydrolase; 98.4 0.00052 1.8E-08 61.4 26.8 231 100-339 139-426 (430)
271 3v65_B Low-density lipoprotein 98.4 0.001 3.5E-08 58.5 31.1 241 59-309 80-326 (386)
272 4hw6_A Hypothetical protein, I 98.4 0.00056 1.9E-08 61.2 26.3 233 100-339 141-429 (433)
273 4hw6_A Hypothetical protein, I 98.3 0.001 3.6E-08 59.4 27.1 237 57-299 140-431 (433)
274 1ijq_A LDL receptor, low-densi 98.3 0.0012 4.1E-08 56.4 34.5 230 75-307 8-244 (316)
275 3p5b_L Low density lipoprotein 98.3 0.0019 6.6E-08 57.1 34.4 234 74-309 89-328 (400)
276 3v64_C Agrin; beta propeller, 98.2 0.0019 6.4E-08 56.0 29.5 189 146-337 75-269 (349)
277 2xe4_A Oligopeptidase B; hydro 98.2 0.00027 9.4E-09 67.9 23.1 194 57-255 175-398 (751)
278 3m0c_C LDL receptor, low-densi 98.2 0.0041 1.4E-07 59.8 32.7 233 74-308 401-639 (791)
279 3v65_B Low-density lipoprotein 98.2 0.0023 7.7E-08 56.3 27.3 190 146-338 118-313 (386)
280 2xe4_A Oligopeptidase B; hydro 98.1 0.00018 6.3E-09 69.2 18.9 190 145-339 175-394 (751)
281 2p9w_A MAL S 1 allergenic prot 98.1 0.0012 4.2E-08 56.0 21.5 157 146-302 15-216 (334)
282 3qqz_A Putative uncharacterize 98.1 0.0033 1.1E-07 51.6 25.6 198 137-337 20-247 (255)
283 1n7d_A LDL receptor, low-densi 98.0 7.5E-05 2.6E-09 71.1 14.6 233 75-310 384-623 (699)
284 3sov_A LRP-6, low-density lipo 98.0 0.0058 2E-07 52.1 29.3 224 75-305 11-242 (318)
285 3amr_A 3-phytase; beta-propell 97.9 0.004 1.4E-07 53.3 21.8 179 155-340 41-260 (355)
286 3amr_A 3-phytase; beta-propell 97.9 0.0079 2.7E-07 51.5 24.3 195 66-264 39-271 (355)
287 2vpj_A Kelch-like protein 12; 97.9 0.0076 2.6E-07 50.7 24.0 227 67-302 15-279 (301)
288 2p9w_A MAL S 1 allergenic prot 97.9 0.0014 4.8E-08 55.6 17.5 155 184-339 12-211 (334)
289 3kya_A Putative phosphatase; s 97.8 0.017 5.8E-07 52.2 25.7 235 100-339 141-471 (496)
290 3s94_A LRP-6, low-density lipo 97.8 0.023 7.9E-07 53.2 30.1 277 56-338 84-418 (619)
291 1ijq_A LDL receptor, low-densi 97.8 0.012 4.3E-07 50.0 30.3 213 119-339 10-234 (316)
292 2xbg_A YCF48-like protein; pho 97.8 0.014 4.8E-07 49.9 29.0 226 98-337 36-273 (327)
293 3qqz_A Putative uncharacterize 97.8 0.012 4E-07 48.3 31.2 202 49-253 20-249 (255)
294 2ism_A Putative oxidoreductase 97.8 0.017 5.7E-07 50.1 26.8 225 55-289 30-333 (352)
295 2xn4_A Kelch-like protein 2; s 97.7 0.012 4.1E-07 49.5 20.8 215 77-302 30-277 (302)
296 3kya_A Putative phosphatase; s 97.7 0.03 1E-06 50.6 29.2 241 58-304 141-478 (496)
297 3ii7_A Kelch-like protein 7; p 97.6 0.022 7.6E-07 47.9 23.4 222 69-302 14-273 (306)
298 4a0p_A LRP6, LRP-6, low-densit 97.6 0.047 1.6E-06 51.2 32.9 225 74-307 12-243 (628)
299 3ii7_A Kelch-like protein 7; p 97.6 0.026 9E-07 47.5 21.4 214 109-333 12-257 (306)
300 3m0c_C LDL receptor, low-densi 97.5 0.033 1.1E-06 53.6 23.3 171 157-330 397-575 (791)
301 3ei3_A DNA damage-binding prot 97.5 0.11 3.8E-06 52.2 37.3 276 55-340 553-910 (1158)
302 3sov_A LRP-6, low-density lipo 97.5 0.041 1.4E-06 46.8 27.0 215 118-338 12-233 (318)
303 3p5b_L Low density lipoprotein 97.4 0.056 1.9E-06 47.6 29.9 219 111-338 85-315 (400)
304 2xn4_A Kelch-like protein 2; s 97.4 0.048 1.6E-06 45.8 21.7 174 153-334 61-262 (302)
305 3sre_A PON1, serum paraoxonase 97.4 0.058 2E-06 46.5 23.4 166 162-333 81-287 (355)
306 2xzh_A Clathrin heavy chain 1; 97.3 0.055 1.9E-06 45.8 31.5 251 75-336 47-325 (365)
307 3s94_A LRP-6, low-density lipo 97.3 0.11 3.7E-06 48.6 27.1 225 74-305 15-247 (619)
308 3a9g_A Putative uncharacterize 97.3 0.075 2.6E-06 46.0 28.5 226 55-289 28-330 (354)
309 3pbp_A Nucleoporin NUP82; beta 97.3 0.058 2E-06 47.3 19.5 141 195-337 31-206 (452)
310 2vpj_A Kelch-like protein 12; 97.2 0.084 2.9E-06 44.2 19.9 184 66-258 62-279 (301)
311 1n7d_A LDL receptor, low-densi 97.2 0.0041 1.4E-07 59.2 12.5 189 148-339 410-610 (699)
312 3pbp_A Nucleoporin NUP82; beta 97.1 0.053 1.8E-06 47.6 17.5 135 162-297 39-208 (452)
313 3das_A Putative oxidoreductase 97.1 0.12 4.1E-06 44.4 20.6 144 184-329 31-218 (347)
314 2ism_A Putative oxidoreductase 97.1 0.13 4.4E-06 44.4 27.2 222 99-331 32-333 (352)
315 1zgk_A Kelch-like ECH-associat 97.0 0.11 3.9E-06 43.6 22.5 226 66-302 24-288 (308)
316 1cru_A Protein (soluble quinop 97.0 0.17 6E-06 45.3 21.5 104 185-289 27-162 (454)
317 1bpo_A Protein (clathrin); cla 96.9 0.19 6.5E-06 44.3 32.0 251 75-336 46-324 (494)
318 1tl2_A L10, protein (tachylect 96.9 0.013 4.4E-07 46.6 11.2 141 186-336 42-203 (236)
319 4asc_A Kelch repeat and BTB do 96.9 0.15 5.3E-06 42.9 24.2 210 70-291 8-253 (315)
320 1zgk_A Kelch-like ECH-associat 96.8 0.17 5.9E-06 42.5 19.6 162 164-334 90-273 (308)
321 2uvk_A YJHT; unknown function, 96.8 0.076 2.6E-06 45.7 16.4 49 206-255 168-224 (357)
322 4a0p_A LRP6, LRP-6, low-densit 96.7 0.43 1.5E-05 44.7 28.5 218 111-337 8-231 (628)
323 2be1_A Serine/threonine-protei 96.6 0.031 1.1E-06 47.8 12.5 191 68-262 11-236 (339)
324 2g8s_A Glucose/sorbosone dehyd 96.5 0.34 1.2E-05 41.7 29.8 228 56-288 18-340 (353)
325 2g8s_A Glucose/sorbosone dehyd 96.5 0.21 7.1E-06 43.1 17.0 143 185-329 18-214 (353)
326 3sre_A PON1, serum paraoxonase 96.4 0.43 1.5E-05 41.1 29.5 187 57-247 51-287 (355)
327 1xi4_A Clathrin heavy chain; a 96.3 0.55 1.9E-05 47.7 20.5 222 75-307 46-295 (1630)
328 4asc_A Kelch repeat and BTB do 96.3 0.39 1.3E-05 40.4 20.3 208 112-333 8-253 (315)
329 3a9g_A Putative uncharacterize 96.1 0.58 2E-05 40.3 26.9 225 98-331 29-330 (354)
330 3ei3_A DNA damage-binding prot 95.9 1.7 5.8E-05 43.8 29.9 171 163-338 863-1057(1158)
331 1tl2_A L10, protein (tachylect 95.9 0.066 2.3E-06 42.5 9.6 102 228-336 42-156 (236)
332 2uvk_A YJHT; unknown function, 95.7 0.24 8.1E-06 42.5 13.6 52 66-118 65-128 (357)
333 2woz_A Kelch repeat and BTB do 95.6 0.85 2.9E-05 38.3 23.3 215 78-302 25-288 (318)
334 2zwa_A Leucine carboxyl methyl 95.4 1.1 3.7E-05 42.6 17.9 193 65-259 396-637 (695)
335 3das_A Putative oxidoreductase 95.3 1.2 4.2E-05 38.1 31.8 238 47-289 23-326 (347)
336 2woz_A Kelch repeat and BTB do 94.6 1.7 6E-05 36.3 20.0 159 166-333 80-263 (318)
337 2zwa_A Leucine carboxyl methyl 94.5 3.4 0.00012 39.1 21.5 193 107-303 396-637 (695)
338 3qhy_B Beta-lactamase inhibito 94.4 1.9 6.4E-05 35.7 19.0 217 100-339 26-242 (282)
339 3ott_A Two-component system se 93.1 6.2 0.00021 37.6 32.8 264 56-337 63-347 (758)
340 2wg3_C Hedgehog-interacting pr 93.1 4.7 0.00016 36.1 15.9 107 185-291 14-159 (463)
341 3qhy_B Beta-lactamase inhibito 92.4 4.1 0.00014 33.7 18.7 246 57-329 25-270 (282)
342 3sbq_A Nitrous-oxide reductase 92.2 1 3.6E-05 41.0 10.2 102 229-330 325-452 (638)
343 1bpo_A Protein (clathrin); cla 91.6 6.8 0.00023 34.7 25.7 176 76-256 124-330 (494)
344 2be1_A Serine/threonine-protei 91.6 1.6 5.6E-05 37.2 10.4 112 197-309 11-138 (339)
345 1xi4_A Clathrin heavy chain; a 91.5 9.9 0.00034 39.0 17.0 159 56-221 106-295 (1630)
346 2xzh_A Clathrin heavy chain 1; 91.4 6 0.0002 33.6 26.0 193 56-255 107-330 (365)
347 1cru_A Protein (soluble quinop 89.2 12 0.0004 33.4 32.7 61 55-115 26-97 (454)
348 3ott_A Two-component system se 86.6 22 0.00077 33.7 34.1 269 56-338 324-622 (758)
349 3sbq_A Nitrous-oxide reductase 85.9 21 0.00072 32.7 13.8 73 184-257 322-408 (638)
350 4gq2_M Nucleoporin NUP120; bet 85.9 6.8 0.00023 38.6 11.7 38 57-94 237-274 (950)
351 3s25_A Hypothetical 7-bladed b 78.9 27 0.00091 29.0 19.8 122 164-301 88-216 (302)
352 3q6k_A 43.2 kDa salivary prote 78.2 33 0.0011 29.6 22.4 167 164-331 123-342 (381)
353 4gq2_M Nucleoporin NUP120; bet 71.0 6.8 0.00023 38.6 6.4 37 186-222 237-273 (950)
354 3uc1_A DNA gyrase subunit A; D 66.3 58 0.002 27.3 23.3 178 154-334 109-321 (327)
355 2wg3_C Hedgehog-interacting pr 65.8 73 0.0025 28.3 28.2 53 56-108 14-79 (463)
356 3zwu_A Alkaline phosphatase PH 65.4 26 0.00089 32.3 8.6 58 273-330 478-548 (592)
357 4fhn_B Nucleoporin NUP120; pro 62.8 5.9 0.0002 39.9 4.2 38 57-94 239-276 (1139)
358 4fhn_B Nucleoporin NUP120; pro 62.1 7.4 0.00025 39.2 4.7 36 187-222 240-275 (1139)
359 4a9v_A PHOX; hydrolase, beta-p 61.1 47 0.0016 30.5 9.3 60 271-330 476-548 (592)
360 3b7f_A Glycosyl hydrolase, BNR 60.0 81 0.0028 26.9 20.5 63 272-334 178-254 (394)
361 3f7f_A Nucleoporin NUP120; nuc 57.8 19 0.00064 34.0 6.2 37 57-95 223-259 (729)
362 3f7f_A Nucleoporin NUP120; nuc 54.4 15 0.00051 34.7 5.0 28 195-222 230-257 (729)
363 3zwu_A Alkaline phosphatase PH 54.3 51 0.0017 30.4 8.4 58 187-244 478-548 (592)
364 3no0_A DNA gyrase subunit A; D 52.8 92 0.0032 25.3 20.1 203 50-256 15-245 (276)
365 4a9v_A PHOX; hydrolase, beta-p 52.2 76 0.0026 29.2 9.0 60 186-245 477-549 (592)
366 3s25_A Hypothetical 7-bladed b 43.4 1.4E+02 0.0047 24.6 24.3 130 154-299 115-253 (302)
367 1suu_A DNA gyrase subunit A; t 41.1 1.5E+02 0.0052 24.5 27.7 194 107-302 6-232 (312)
368 1wp5_A Topoisomerase IV; broke 37.9 1.8E+02 0.0061 24.3 23.8 193 107-301 3-225 (323)
369 1suu_A DNA gyrase subunit A; t 33.7 2E+02 0.0069 23.7 26.1 191 65-257 6-231 (312)
370 3twe_A Alpha4H; unknown functi 24.1 65 0.0022 14.9 3.5 21 4-24 3-23 (27)
371 3al9_A Plexin-A2; beta-propell 24.0 2.6E+02 0.0089 25.3 7.9 68 229-296 402-476 (539)
372 3no0_A DNA gyrase subunit A; D 23.9 2.9E+02 0.0098 22.3 19.8 157 55-213 67-244 (276)
373 4hvt_A Ritya.17583.B, post-pro 23.1 4.8E+02 0.016 24.6 22.4 267 62-339 136-465 (711)
374 3b7f_A Glycosyl hydrolase, BNR 22.2 3.5E+02 0.012 22.7 26.3 133 186-321 233-391 (394)
No 1
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.6e-62 Score=429.73 Aligned_cols=340 Identities=85% Similarity=1.404 Sum_probs=317.0
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHhcCCCccccccCCCccccceeeEEeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEE
Q psy15421 1 MNELDSLRQEAETLKNAIRDARKAACDTSLVTATGNMEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLI 80 (340)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~ 80 (340)
|+|++.+++|++.+++.++.+++...+..+.....+..+.++++.+.+++|+||.+.|++++|+|++++|++++.||+|+
T Consensus 1 ~~e~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~ 80 (340)
T 1got_B 1 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLI 80 (340)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHTTTSCCCCCCCCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEE
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhcccchhHHhhcCCCccccccchhheeecCCCCceEEEEECCCCCEEEEEeCCCcEE
Confidence 68999999999999999998888766665655566677777788888999999999999999999999999999999999
Q ss_pred EEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEE
Q psy15421 81 VWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTS 160 (340)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~ 160 (340)
+||..+++.+..++.|...|.+++|+|+++++++|+.|+.+++|++.+.+........+.+|...+.++.|.+++.++++
T Consensus 81 iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~ 160 (340)
T 1got_B 81 IWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS 160 (340)
T ss_dssp EEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEE
T ss_pred EEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEE
Confidence 99999999999999999999999999999999999999999999998776666667778899999999999988899999
Q ss_pred eCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCE
Q psy15421 161 SGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 240 (340)
Q Consensus 161 ~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~ 240 (340)
+.|+.|++||+++++....+.+|.+.|.+++|+|+++++++|+.||+|++||++++.+...+.+|..+|++++|+|++.+
T Consensus 161 s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 240 (340)
T 1got_B 161 SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA 240 (340)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSE
T ss_pred ECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEE
Q psy15421 241 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGV 320 (340)
Q Consensus 241 l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~ 320 (340)
|++|+.|+.|++||++..+.+..+.+......|.+++|+|++++|++|+.|+.|++||..+.+....+.+|.+.|++++|
T Consensus 241 l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~ 320 (340)
T 1got_B 241 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGV 320 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred EEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEE
Confidence 99999999999999998888777766665567999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEeeCCCcEEecC
Q psy15421 321 TEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 321 s~d~~~l~s~s~D~~i~iW~ 340 (340)
+|+|.+|+|||.|++|+|||
T Consensus 321 s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 321 TDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CTTSSCEEEEETTSCEEEEC
T ss_pred cCCCCEEEEEcCCccEEecC
Confidence 99999999999999999997
No 2
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.3e-57 Score=401.21 Aligned_cols=337 Identities=54% Similarity=0.971 Sum_probs=302.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccccCCCccccceeeEEeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEe
Q psy15421 4 LDSLRQEAETLKNAIRDARKAACDTSLVTATGNMEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 83 (340)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd 83 (340)
+..+++|.+.++..+++.++...+..+..........+.+..+..++|+||.+.|++++|+|++++|+||+.||+|++||
T Consensus 13 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd 92 (354)
T 2pbi_B 13 LASLKSEAESLKGKLEEERAKLHDVELHQVAERVEALGQFVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWD 92 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCHHHHTTTSCCCCCCCCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCccHHHhccCCccccccccEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 45678899999999998888776666666666666667777788899999999999999999999999999999999999
Q ss_pred CCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCC--ceEEEEeecCCCcceEEEEEcCCC-eEEEE
Q psy15421 84 SYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREG--NVRVSRELPGHTGYLSCCRFLDDN-QIVTS 160 (340)
Q Consensus 84 ~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~ 160 (340)
..+++....+..|...|.+++|+|++.++++|+.|+.+++|++..... .......+.+|...+.++.|.+++ .++++
T Consensus 93 ~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~ 172 (354)
T 2pbi_B 93 SFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTA 172 (354)
T ss_dssp TTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEE
T ss_pred CCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEE
Confidence 999999999999999999999999999999999999999999865321 112234566899999999998765 79999
Q ss_pred eCCCeEEEEECCCCceEEEEecCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCC
Q psy15421 161 SGDMSCALWDIETGQQCASFIGHTGDVMSLSLAP--DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 238 (340)
Q Consensus 161 ~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~ 238 (340)
+.|++|++||+++++.+..+.+|...+.+++++| +++++++|+.||+|++||+++++++..+.+|...|++++|+|++
T Consensus 173 s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~ 252 (354)
T 2pbi_B 173 SGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSG 252 (354)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred eCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCC
Confidence 9999999999999999999999999999999988 46899999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEE
Q psy15421 239 WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCL 318 (340)
Q Consensus 239 ~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~ 318 (340)
.+|++|+.|++|++||++..+.+..+........+.+++|+|++++|++|+.|++|++||..+++.+..+.+|.+.|+++
T Consensus 253 ~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l 332 (354)
T 2pbi_B 253 DAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTL 332 (354)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEE
Confidence 99999999999999999988777666555445568999999999999999999999999999999999999999999999
Q ss_pred EECCCCCEEEEeeCCCcEEecC
Q psy15421 319 GVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 319 ~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
+|+|||.+|+|||.|++|+||+
T Consensus 333 ~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 333 RVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EECTTSSCEEEEETTSEEEEEC
T ss_pred EECCCCCEEEEEcCCCCEEecC
Confidence 9999999999999999999997
No 3
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.2e-55 Score=391.21 Aligned_cols=335 Identities=46% Similarity=0.902 Sum_probs=278.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccc----cCCCccccceeeEEeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEE
Q psy15421 6 SLRQEAETLKNAIRDARKAACDTSLVTA----TGNMEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIV 81 (340)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i 81 (340)
.++++++.++..++..+....+..+... ......+........++|+||.+.|++++|+|++++|+||+.|++|+|
T Consensus 13 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~i 92 (380)
T 3iz6_a 13 AATASVNSLRERLRQRRQTLLDTDVEKYSKAQGRTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIV 92 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGCCSCHHHHGGGCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhccCCchHHhhhcccccccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 3556677777666655553322211111 111111222344567899999999999999999999999999999999
Q ss_pred EeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCC---CceEEEEeecCCCcceEEEEEcCC--Ce
Q psy15421 82 WDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTRE---GNVRVSRELPGHTGYLSCCRFLDD--NQ 156 (340)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~--~~ 156 (340)
||..+++....+..|...|.+++|+|++++|++|+.|+.+++|++.... +.......+.+|...+.++.|.++ ..
T Consensus 93 Wd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~ 172 (380)
T 3iz6_a 93 WNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETR 172 (380)
T ss_dssp EETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSC
T ss_pred EECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCE
Confidence 9999999999999999999999999999999999999999999986532 122233456789999998888764 46
Q ss_pred EEEEeCCCeEEEEECCCCceEEEE-----ecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECC-CCeeeeEecCCCCCe
Q psy15421 157 IVTSSGDMSCALWDIETGQQCASF-----IGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIR-DGSCKQTFPGHESDI 229 (340)
Q Consensus 157 l~~~~~d~~v~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~~~sg~~dg~i~~wd~~-~~~~~~~~~~h~~~v 229 (340)
+++++.|++|++||+.+++.+..+ .+|...+.+++++| ++.++++|+.||+|++||++ .+.++..+.+|...|
T Consensus 173 l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v 252 (380)
T 3iz6_a 173 LITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDI 252 (380)
T ss_dssp EEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCC
T ss_pred EEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCe
Confidence 999999999999999999888776 57889999999987 78899999999999999998 456788899999999
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCC-----cccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCcee
Q psy15421 230 NAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDN-----IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER 304 (340)
Q Consensus 230 ~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~-----~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~ 304 (340)
++++|+|++.+|++|+.|++|++||+++++.+..+.... ....+++++|+|+|++|++|+.|+.|++||..+++.
T Consensus 253 ~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~ 332 (380)
T 3iz6_a 253 NSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEM 332 (380)
T ss_dssp CEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCE
T ss_pred EEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCce
Confidence 999999999999999999999999999888776654321 122488999999999999999999999999988887
Q ss_pred eeee----ccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 305 AGIL----AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 305 ~~~~----~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
...+ .+|.+.|++++|+|||.+|+|||.|++|+||+
T Consensus 333 ~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~ 372 (380)
T 3iz6_a 333 VLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWA 372 (380)
T ss_dssp EEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred EEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEe
Confidence 7665 68999999999999999999999999999996
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-53 Score=384.06 Aligned_cols=287 Identities=23% Similarity=0.395 Sum_probs=267.3
Q ss_pred eEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEcc
Q psy15421 48 RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLK 127 (340)
Q Consensus 48 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~ 127 (340)
...+.+|.++|++++|+|++++|+||+.||+|+|||..+++....+.+|...|.+++|+|++++|++|+.|++|++||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCCC
Q psy15421 128 TREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDA 206 (340)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg 206 (340)
+.. ....+.+|...|.++.|.+++ .+++++.|++|++||+++++.+..+.+|...+.+++++|++.++++|+.|+
T Consensus 181 ~~~----~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~ 256 (410)
T 1vyh_C 181 GFE----CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256 (410)
T ss_dssp SSC----EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCc----eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCC
Confidence 543 456678999999999998764 688999999999999999999999999999999999999999999999999
Q ss_pred cEEEEECCCCeeeeEecCCCCCeEEEEEecC--------------------CCEEEEEeCCCcEEEEeCcCCcEEEEeec
Q psy15421 207 SAKLWDIRDGSCKQTFPGHESDINAVTFFPN--------------------GWAFATGSDDATCRLFDIRADQELAMYSH 266 (340)
Q Consensus 207 ~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~--------------------~~~l~s~s~d~~i~iwd~~~~~~~~~~~~ 266 (340)
+|++||++++++...+.+|...|.+++|+|+ +.++++|+.|+.|++||+++++.+..+..
T Consensus 257 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~ 336 (410)
T 1vyh_C 257 TVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG 336 (410)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred eEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEEC
Confidence 9999999999999999999999999999996 67899999999999999998887766542
Q ss_pred CCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 267 DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 267 ~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
+...|.+++|+|++++|++|+.|++|++||..+++++..+.+|...|++++|+|++.+|+|||.|++|+||+
T Consensus 337 --h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 337 --HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp --CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred --CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 334699999999999999999999999999999999999999999999999999999999999999999997
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.2e-51 Score=357.05 Aligned_cols=287 Identities=20% Similarity=0.304 Sum_probs=258.4
Q ss_pred eEEecCccCcEEEEEEcCC----CCeEEEEeCCCeEEEEeCCCCCe--eEEeeCCCCcEEEEEECCCCCEEEEEeCCCeE
Q psy15421 48 RRTLRGHLAKIYAMHWGSD----SRNLVSASQDGKLIVWDSYTTNK--VHAIPLRSSWVMTCAYAPSGSFVACGGLDNIC 121 (340)
Q Consensus 48 ~~~~~~h~~~v~~~~~s~~----~~~l~s~~~d~~i~iwd~~~~~~--~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v 121 (340)
.+.+++|.+.|++++|+|+ +.+|+||+.|++|+|||..+.+. ...+.+|...|.+++|+|++.++++++.|++|
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i 104 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHI 104 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcE
Confidence 4577899999999999875 56899999999999999876653 34678999999999999999999999999999
Q ss_pred EEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEE
Q psy15421 122 SIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFV 200 (340)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 200 (340)
++||+.++. ....+..|...+.++.|++++ .+++++.|+.|++||+++++....+..|...+.+++|+|++++++
T Consensus 105 ~lWd~~~~~----~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la 180 (321)
T 3ow8_A 105 RLWDLENGK----QIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA 180 (321)
T ss_dssp EEEETTTTE----EEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEE
T ss_pred EEEECCCCC----EEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEE
Confidence 999997653 345566777888888898765 688889999999999999999888999999999999999999999
Q ss_pred EEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcC
Q psy15421 201 SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR 280 (340)
Q Consensus 201 sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~ 280 (340)
+|+.||.|++||+++++++..+++|..+|.+++|+|++.+|++|+.|+.|++||++..+.+..+. .+...|.+++|+|
T Consensus 181 sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~h~~~v~~~~~sp 258 (321)
T 3ow8_A 181 SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLS--GHASWVLNVAFCP 258 (321)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEEC--CCSSCEEEEEECT
T ss_pred EEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEc--CCCCceEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999877766553 3334699999999
Q ss_pred CCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 281 SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 281 ~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
++++|++|+.|++|++||..+++++..+.+|.+.|++++|+|++.+|++++.|++|+|||
T Consensus 259 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 259 DDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred CCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 999999999999999999999999999999999999999999999999999999999997
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=8.8e-50 Score=345.39 Aligned_cols=286 Identities=20% Similarity=0.379 Sum_probs=254.6
Q ss_pred EEeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Q psy15421 46 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYS 125 (340)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~ 125 (340)
..+++|++|.+.|++++|+|++++|++++.||+|++||+.+++.+..+..|..+|.+++|+|++++|++|+.|++|++|+
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCc-eEEEEecCCCCeEEEEEcC-CCCEEEEE
Q psy15421 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQ-QCASFIGHTGDVMSLSLAP-DMRTFVSG 202 (340)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~-~~~~~~~~~~~v~~~~~~~-~~~~~~sg 202 (340)
+.+++ ....+.+|...|.++.|++++ .+++++.|++|++||++++. ....+.+|...|.+++|+| ++..+++|
T Consensus 84 ~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg 159 (304)
T 2ynn_A 84 YNTGE----KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (304)
T ss_dssp TTTCC----EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEE
T ss_pred CCCCc----EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEE
Confidence 97754 345678999999999998765 68899999999999998874 4567788999999999999 67899999
Q ss_pred eCCCcEEEEECCCCeeeeEe-cCCCCCeEEEEEec--CCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEc
Q psy15421 203 ACDASAKLWDIRDGSCKQTF-PGHESDINAVTFFP--NGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS 279 (340)
Q Consensus 203 ~~dg~i~~wd~~~~~~~~~~-~~h~~~v~~v~~~~--~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s 279 (340)
+.|++|++||++++.....+ .+|...+..+.|.| ++.++++|+.|+.|++||+++++.+..+. .+...|.+++|+
T Consensus 160 s~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~--~h~~~v~~~~~~ 237 (304)
T 2ynn_A 160 CLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE--GHMSNVSFAVFH 237 (304)
T ss_dssp ETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEE--CCSSCEEEEEEC
T ss_pred eCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeC--CCCCCEEEEEEC
Confidence 99999999999887765555 45667899999987 67899999999999999999888776664 233469999999
Q ss_pred CCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCC--EEEEeeCCCcEE
Q psy15421 280 RSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM--AVATGSWDSFLR 337 (340)
Q Consensus 280 ~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~--~l~s~s~D~~i~ 337 (340)
|++++|++|+.|++|++||..+++.+..+..|.+.+++++|+|++. ++++|+.||.+.
T Consensus 238 p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~ 297 (304)
T 2ynn_A 238 PTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTV 297 (304)
T ss_dssp SSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEE
Confidence 9999999999999999999999999999999999999999999875 588888777654
No 7
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.5e-49 Score=341.86 Aligned_cols=287 Identities=24% Similarity=0.373 Sum_probs=252.2
Q ss_pred eEEeEEecCccCcEEEEEEcCCC-CeEEEEeCCCeEEEEeCCCC-----CeeEEeeCCCCcEEEEEECCCCCEEEEEeCC
Q psy15421 45 MRTRRTLRGHLAKIYAMHWGSDS-RNLVSASQDGKLIVWDSYTT-----NKVHAIPLRSSWVMTCAYAPSGSFVACGGLD 118 (340)
Q Consensus 45 ~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~i~iwd~~~~-----~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d 118 (340)
...+.+|+||.+.|++++|+|++ ++|+||+.|++|++||+... ..+..+.+|...|.+++|+|++++|++|+.|
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D 86 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWD 86 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCC
Confidence 45567899999999999999965 79999999999999998642 2456788999999999999999999999999
Q ss_pred CeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCC--
Q psy15421 119 NICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPD-- 195 (340)
Q Consensus 119 ~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~-- 195 (340)
++|++||+.+++ ....+.+|...|.++.|.+++ .+++++.|++|++||++ ++.+..+.+|...+.++++.|.
T Consensus 87 ~~v~~wd~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~ 161 (319)
T 3frx_A 87 KTLRLWDVATGE----TYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEK 161 (319)
T ss_dssp SEEEEEETTTTE----EEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC--
T ss_pred CEEEEEECCCCC----eeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCC
Confidence 999999997653 445678999999999998764 68899999999999996 4677888899999999999985
Q ss_pred ----CCEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCccc
Q psy15421 196 ----MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIIC 271 (340)
Q Consensus 196 ----~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~ 271 (340)
+..+++|+.|+.|++||+++.+....+.+|..+|++++|+|++.+|++|+.|+.|++||+.+.+.+..+... .
T Consensus 162 ~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~ 238 (319)
T 3frx_A 162 ADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ---D 238 (319)
T ss_dssp ----CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC---S
T ss_pred CCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC---C
Confidence 448999999999999999999988999999999999999999999999999999999999988887766543 3
Q ss_pred ceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeec--------cCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 272 GITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA--------GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 272 ~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~--------~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
.|.+++|+|++.+|++++.++ +++|+.........+. .|...+.+++|+|||++|++|+.|++|+|||
T Consensus 239 ~v~~~~~sp~~~~la~~~~~~-i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd 314 (319)
T 3frx_A 239 EVFSLAFSPNRYWLAAATATG-IKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ 314 (319)
T ss_dssp CEEEEEECSSSSEEEEEETTE-EEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCC-cEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEE
Confidence 589999999999999988765 9999987766554443 3567899999999999999999999999996
No 8
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.8e-48 Score=336.12 Aligned_cols=293 Identities=23% Similarity=0.417 Sum_probs=261.0
Q ss_pred eeEEeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEE
Q psy15421 44 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSI 123 (340)
Q Consensus 44 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i 123 (340)
....+.++.+|.+.|.+++|+|++++|++++.||.|++|+..+++....+..|...|.+++|+|++++|++++.|+.|++
T Consensus 12 ~~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 12 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 91 (312)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence 44567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCceEEEEeecCCCcceEEEEEcCC-CeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEE
Q psy15421 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLDD-NQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSG 202 (340)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg 202 (340)
|++.++. ....+.+|...+.++.|.++ ..+++++.|+.|++||+++++.+..+..|...+.+++|+|+++++++|
T Consensus 92 wd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 167 (312)
T 4ery_A 92 WDVSSGK----CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 167 (312)
T ss_dssp EETTTCC----EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EECCCCc----EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEE
Confidence 9997653 34567789999999999876 478899999999999999999999999999999999999999999999
Q ss_pred eCCCcEEEEECCCCeeeeEe-cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeec-CCcccceEEEEEcC
Q psy15421 203 ACDASAKLWDIRDGSCKQTF-PGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSH-DNIICGITSVAFSR 280 (340)
Q Consensus 203 ~~dg~i~~wd~~~~~~~~~~-~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-~~~~~~i~~~~~s~ 280 (340)
+.||.|++||+++++....+ ..+..++..++|+|++.++++++.|+.|++||+++.+.+..+.. ......+......+
T Consensus 168 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (312)
T 4ery_A 168 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 247 (312)
T ss_dssp ETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECS
T ss_pred eCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeC
Confidence 99999999999998877665 45667899999999999999999999999999998887766542 22222233334457
Q ss_pred CCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEee--CCCcEEecC
Q psy15421 281 SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGS--WDSFLRIWN 340 (340)
Q Consensus 281 ~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s--~D~~i~iW~ 340 (340)
++.+|++|+.|+.|++||..+.+.+..+.+|.+.|.+++|+|++.+|++++ .|++|++|+
T Consensus 248 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~ 309 (312)
T 4ery_A 248 GGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 309 (312)
T ss_dssp SSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEE
T ss_pred CCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEec
Confidence 889999999999999999999999999999999999999999999999997 599999995
No 9
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-48 Score=344.33 Aligned_cols=292 Identities=20% Similarity=0.328 Sum_probs=246.6
Q ss_pred EEeEEecCccC-cEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeE---EeeCCCCcEEEEEECCCCCEEEEEeCCCeE
Q psy15421 46 RTRRTLRGHLA-KIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVH---AIPLRSSWVMTCAYAPSGSFVACGGLDNIC 121 (340)
Q Consensus 46 ~~~~~~~~h~~-~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~---~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v 121 (340)
....+|++|.+ .|++++|+|++++|++|+.|++|+|||+.++.... ...+|...|.+++|+|++++|++|+.|+++
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v 85 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATT 85 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcE
Confidence 45678999998 99999999999999999999999999998775332 235789999999999999999999999999
Q ss_pred EEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCc---eEEEEecCCCCeEEEEEcCCCC
Q psy15421 122 SIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQ---QCASFIGHTGDVMSLSLAPDMR 197 (340)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~ 197 (340)
++|++..+. ......+.+|...|.++.|++++ .|++++.|++|++||+..+. .+..+.+|...|.+++|+|+++
T Consensus 86 ~iw~~~~~~--~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 86 CIWKKNQDD--FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp EEEEECCC---EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS
T ss_pred EEEEccCCC--eEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC
Confidence 999986543 33456788999999999998764 68899999999999998764 3556778999999999999999
Q ss_pred EEEEEeCCCcEEEEECCCCe--eeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCc---------------E
Q psy15421 198 TFVSGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ---------------E 260 (340)
Q Consensus 198 ~~~sg~~dg~i~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~---------------~ 260 (340)
++++|+.|++|++||.+++. +...+.+|...|.+++|+|++.+|++|+.|++|++||..... .
T Consensus 164 ~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
T 3fm0_A 164 LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKC 243 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEE
T ss_pred EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccce
Confidence 99999999999999998875 456789999999999999999999999999999999964211 1
Q ss_pred EEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCce---------eeeeeccCCcceEEEEECCCC-CEEEEe
Q psy15421 261 LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTE---------RAGILAGHDNRVSCLGVTEDG-MAVATG 330 (340)
Q Consensus 261 ~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~---------~~~~~~~h~~~i~~~~~s~d~-~~l~s~ 330 (340)
+..+. ..+...|.+++|+|++..|++++.|+.|++|+..... ....+.+|.+.|++++|+|++ .+|+||
T Consensus 244 ~~~~~-~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~ 322 (345)
T 3fm0_A 244 ICTLS-GFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASC 322 (345)
T ss_dssp EEEEC-SSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEE
T ss_pred eEEec-CCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEc
Confidence 11111 1133469999999999999999999999999865432 112346899999999999998 599999
Q ss_pred eCCCcEEecC
Q psy15421 331 SWDSFLRIWN 340 (340)
Q Consensus 331 s~D~~i~iW~ 340 (340)
|.||+|++|+
T Consensus 323 s~Dg~v~~W~ 332 (345)
T 3fm0_A 323 SDDGEVAFWK 332 (345)
T ss_dssp ETTSCEEEEE
T ss_pred CCCCcEEEEE
Confidence 9999999996
No 10
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.6e-47 Score=336.74 Aligned_cols=288 Identities=24% Similarity=0.382 Sum_probs=242.5
Q ss_pred eeeEEeEEecCccCcEEEEEE-----cC-CCCeEEEEeCCCeEEEEeCCCC-------CeeEEeeCCCCcEEEEEECCCC
Q psy15421 43 IQMRTRRTLRGHLAKIYAMHW-----GS-DSRNLVSASQDGKLIVWDSYTT-------NKVHAIPLRSSWVMTCAYAPSG 109 (340)
Q Consensus 43 ~~~~~~~~~~~h~~~v~~~~~-----s~-~~~~l~s~~~d~~i~iwd~~~~-------~~~~~~~~~~~~i~~v~~~~~~ 109 (340)
++.....+|+||.+.|++++| ++ ++++|+||+.|++|++||+.+. .....+.+|...|.+++|+|++
T Consensus 9 ~~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~ 88 (343)
T 2xzm_R 9 IQVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN 88 (343)
T ss_dssp EEEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST
T ss_pred eEeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC
Confidence 344566789999999999999 76 8999999999999999998754 2356678999999999999999
Q ss_pred CEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEEEEe---cCCC
Q psy15421 110 SFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCASFI---GHTG 185 (340)
Q Consensus 110 ~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~---~~~~ 185 (340)
.++++|+.|++|++||+.++. ....+.+|...|.++.|++++ .+++++.|+.|++||+.. ....... .|..
T Consensus 89 ~~l~s~s~D~~v~lwd~~~~~----~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~ 163 (343)
T 2xzm_R 89 CFAISSSWDKTLRLWDLRTGT----TYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG-ECKFSSAEKENHSD 163 (343)
T ss_dssp TEEEEEETTSEEEEEETTSSC----EEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS-CEEEECCTTTSCSS
T ss_pred CEEEEEcCCCcEEEEECCCCc----EEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC-CceeeeecccCCCc
Confidence 999999999999999997653 345677899999999998765 688999999999999974 3333333 6888
Q ss_pred CeEEEEEcCCC----------CEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeC
Q psy15421 186 DVMSLSLAPDM----------RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI 255 (340)
Q Consensus 186 ~v~~~~~~~~~----------~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~ 255 (340)
.+.+++|+|++ .++++++.||.|++||. .......+.+|..+|++++|+|++++|++|+.|+.|++||+
T Consensus 164 ~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 164 WVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDI 242 (343)
T ss_dssp CEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEES
T ss_pred eeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 99999999987 78999999999999994 56677788999999999999999999999999999999999
Q ss_pred cC-CcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeee--eec-----------cCCcceEEEEEC
Q psy15421 256 RA-DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG--ILA-----------GHDNRVSCLGVT 321 (340)
Q Consensus 256 ~~-~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~--~~~-----------~h~~~i~~~~~s 321 (340)
.. ......+.+. ..|.+++|+|+++++++| .|+.|++|+..+.+... .+. +|...|++++|+
T Consensus 243 ~~~~~~~~~~~~~---~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 318 (343)
T 2xzm_R 243 LNLTYPQREFDAG---STINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWN 318 (343)
T ss_dssp SCCSSCSEEEECS---SCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEEC
T ss_pred CCCcccceeecCC---CcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEEC
Confidence 53 3333333222 348999999999988766 46679999987765433 332 788899999999
Q ss_pred CCCCEEEEeeCCCcEEecC
Q psy15421 322 EDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 322 ~d~~~l~s~s~D~~i~iW~ 340 (340)
|+|.+|++|+.||+|++|+
T Consensus 319 p~g~~l~sg~~Dg~v~~w~ 337 (343)
T 2xzm_R 319 ALGKKLFAGFTDGVIRTFS 337 (343)
T ss_dssp SSSCCEEEEETTSEEEEEE
T ss_pred CCCCeEEEecCCceEEEEE
Confidence 9999999999999999996
No 11
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-47 Score=335.64 Aligned_cols=291 Identities=20% Similarity=0.320 Sum_probs=235.5
Q ss_pred EEeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCC--eeEEe-eC-CCCcEEEEEECCCCCEEEEEeCCCeE
Q psy15421 46 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTN--KVHAI-PL-RSSWVMTCAYAPSGSFVACGGLDNIC 121 (340)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~--~~~~~-~~-~~~~i~~v~~~~~~~~l~~~~~d~~v 121 (340)
...++|++|.++|++++|+|+ +|++|+.|++|++||+.++. .+..+ .. |...|.+++|+|++++|++|+.|++|
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v 82 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTV 82 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcE
Confidence 456789999999999999988 99999999999999997653 34444 34 88999999999999999999999999
Q ss_pred EEEEccCCC---CceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCC----ceEEEEecCCCCeEEEEEc
Q psy15421 122 SIYSLKTRE---GNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETG----QQCASFIGHTGDVMSLSLA 193 (340)
Q Consensus 122 ~i~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~----~~~~~~~~~~~~v~~~~~~ 193 (340)
++|++.... ........+.+|...|.++.|++++ .|++++.|++|++||+... +.+..+.+|...|.+++|+
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~ 162 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWH 162 (330)
T ss_dssp EEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEEC
T ss_pred EEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEEC
Confidence 999985422 1223456678999999999998765 6889999999999999432 4566788999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCC--eeeeEecCCCCCeEEEEEecC--CCEEEEEeCCCcEEEEeCcCC--------cEE
Q psy15421 194 PDMRTFVSGACDASAKLWDIRDG--SCKQTFPGHESDINAVTFFPN--GWAFATGSDDATCRLFDIRAD--------QEL 261 (340)
Q Consensus 194 ~~~~~~~sg~~dg~i~~wd~~~~--~~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~d~~i~iwd~~~~--------~~~ 261 (340)
|++.++++|+.|++|++||.+++ +++..+.+|...|.+++|+|+ +.++++|+.|++|++||+... ...
T Consensus 163 p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~ 242 (330)
T 2hes_X 163 PSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCE 242 (330)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEe
Confidence 99999999999999999998776 577889999999999999998 778999999999999998643 122
Q ss_pred EEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCce--eee-eeccCCc-ceEEEEECC--CCCEEEEeeCCCc
Q psy15421 262 AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTE--RAG-ILAGHDN-RVSCLGVTE--DGMAVATGSWDSF 335 (340)
Q Consensus 262 ~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~--~~~-~~~~h~~-~i~~~~~s~--d~~~l~s~s~D~~ 335 (340)
..+. ..+...|.+++|+|++ +|++|+.|+.|++|+..+++ ... .+.+|.. .|++++|+| ++.+|+|||.||+
T Consensus 243 ~~~~-~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~ 320 (330)
T 2hes_X 243 AILP-DVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGI 320 (330)
T ss_dssp EECC-SCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSE
T ss_pred eecc-cccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCc
Confidence 2221 1234569999999765 88999999999999987663 232 3467887 899999999 7899999999999
Q ss_pred EEecC
Q psy15421 336 LRIWN 340 (340)
Q Consensus 336 i~iW~ 340 (340)
|+|||
T Consensus 321 v~~W~ 325 (330)
T 2hes_X 321 VNFWS 325 (330)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99996
No 12
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4e-48 Score=340.29 Aligned_cols=284 Identities=18% Similarity=0.177 Sum_probs=235.7
Q ss_pred cCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCC-----------CCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCe
Q psy15421 52 RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYT-----------TNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNI 120 (340)
Q Consensus 52 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~-----------~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~ 120 (340)
..|...|.+++|+|||++|++++ |+++++||... .........+...|.+++|+|++ ++++|+.|++
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~ 104 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGA 104 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSE
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCE
Confidence 46778899999999999998877 77888887321 01111222345679999999985 6789999999
Q ss_pred EEEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCC-E
Q psy15421 121 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMR-T 198 (340)
Q Consensus 121 v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 198 (340)
|++||+.+++..........+|...|.++.|++++ .|++++.|++|++||+++++.+..+.+|.+.|.+++|+|++. +
T Consensus 105 v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 105 VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp EEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred EEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCc
Confidence 99999988765555555667899999999998765 688999999999999999999999999999999999999875 7
Q ss_pred EEEEeCCCcEEEEECCCCeeeeEec--CCCCCeEEEEEecC-CCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEE
Q psy15421 199 FVSGACDASAKLWDIRDGSCKQTFP--GHESDINAVTFFPN-GWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITS 275 (340)
Q Consensus 199 ~~sg~~dg~i~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~ 275 (340)
+++|+.|++|++||++++++...+. .|...+.+++|+|+ +.+|++|+.||.|++||+++.+.+..+. .+...|++
T Consensus 185 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~--~h~~~v~~ 262 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSA--VHSQCVTG 262 (344)
T ss_dssp EEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEE--CCSSCEEE
T ss_pred eeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEc--CCCCCEEE
Confidence 8899999999999999998877664 45667999999995 6789999999999999999887776654 23346999
Q ss_pred EEEcCCC-cEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCC-EEEEeeCCCcEEecC
Q psy15421 276 VAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM-AVATGSWDSFLRIWN 340 (340)
Q Consensus 276 ~~~s~~~-~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~-~l~s~s~D~~i~iW~ 340 (340)
++|+|++ ++|++|+.|++|++||..+++.. .+.+|.+.|++++|+|++. +|+|||.|++|++|+
T Consensus 263 v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~ 328 (344)
T 4gqb_B 263 LVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHV 328 (344)
T ss_dssp EEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred EEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEE
Confidence 9999998 58999999999999999887754 5679999999999999986 577999999999995
No 13
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.9e-48 Score=342.46 Aligned_cols=287 Identities=19% Similarity=0.240 Sum_probs=237.1
Q ss_pred EecCccCcEEEEEEcCCCCeEEEEeC------CCeEEEEeCCCCCee----EEeeCCCCcEEEEEECCCCCEEEEEeCCC
Q psy15421 50 TLRGHLAKIYAMHWGSDSRNLVSASQ------DGKLIVWDSYTTNKV----HAIPLRSSWVMTCAYAPSGSFVACGGLDN 119 (340)
Q Consensus 50 ~~~~h~~~v~~~~~s~~~~~l~s~~~------d~~i~iwd~~~~~~~----~~~~~~~~~i~~v~~~~~~~~l~~~~~d~ 119 (340)
...+|...|.+++|+|||++|+|++. |++|++|+..++... .....|...|.+++|+|++.++ +++.|+
T Consensus 37 ~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~dg 115 (357)
T 4g56_B 37 APACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VASDSG 115 (357)
T ss_dssp ---CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EEETTS
T ss_pred CcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EEECCC
Confidence 34689999999999999999999998 788999998766532 2344677889999999998655 578899
Q ss_pred eEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCC-
Q psy15421 120 ICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMR- 197 (340)
Q Consensus 120 ~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~- 197 (340)
+|++||+.+++..........+|...|.++.|++++ .|++++.|+.|++||+++++.+..+.+|...|.+++|+|++.
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~ 195 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDT 195 (357)
T ss_dssp CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSS
T ss_pred EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCc
Confidence 999999987654433334556899999999998765 688999999999999999999999999999999999999875
Q ss_pred EEEEEeCCCcEEEEECCCCeeeeEe--cCCCCCeEEEEEecC-CCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceE
Q psy15421 198 TFVSGACDASAKLWDIRDGSCKQTF--PGHESDINAVTFFPN-GWAFATGSDDATCRLFDIRADQELAMYSHDNIICGIT 274 (340)
Q Consensus 198 ~~~sg~~dg~i~~wd~~~~~~~~~~--~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~ 274 (340)
++++++.||+|++||++++++...+ ..|...+.+++|+|+ +.+|++|+.|+.|++||+++.+.+..+. .+...|+
T Consensus 196 ~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~--~~~~~v~ 273 (357)
T 4g56_B 196 IFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA--VHSQNIT 273 (357)
T ss_dssp CEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC--CCSSCEE
T ss_pred eeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEe--ccceeEE
Confidence 7889999999999999998776544 456778999999997 5689999999999999999887766553 2334699
Q ss_pred EEEEcCCC-cEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECC-CCCEEEEeeCCCcEEecC
Q psy15421 275 SVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTE-DGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 275 ~~~~s~~~-~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~-d~~~l~s~s~D~~i~iW~ 340 (340)
+++|+|++ ++|++|+.|++|++||..+++.+..+ +|.+.|++++|+| |+.+|+|||.|++|++||
T Consensus 274 ~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~ 340 (357)
T 4g56_B 274 GLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHH 340 (357)
T ss_dssp EEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred EEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEE
Confidence 99999987 58999999999999999988877655 8999999999998 899999999999999996
No 14
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.7e-47 Score=360.16 Aligned_cols=287 Identities=21% Similarity=0.338 Sum_probs=242.2
Q ss_pred EEecCccCcEEEEEEcCCCC-eEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEcc
Q psy15421 49 RTLRGHLAKIYAMHWGSDSR-NLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLK 127 (340)
Q Consensus 49 ~~~~~h~~~v~~~~~s~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~ 127 (340)
.++.+|.+.|.+++|+|+++ .|++++.|++|++||..+++....+..|...|.+++|+|++++|++|+.|++|++|++.
T Consensus 141 ~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~ 220 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV 220 (611)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECC
Confidence 46789999999999999987 59999999999999998888888999999999999999999999999999999999987
Q ss_pred CCCCceEEEEeec-------CCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEE---------------------
Q psy15421 128 TREGNVRVSRELP-------GHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCA--------------------- 178 (340)
Q Consensus 128 ~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~--------------------- 178 (340)
++. ....+. +|...|.++.|++++ .|++++.|++|++||+.+++...
T Consensus 221 ~g~----~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (611)
T 1nr0_A 221 DGT----KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQA 296 (611)
T ss_dssp TCC----EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSC
T ss_pred CCc----EeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCE
Confidence 653 222332 799999999998765 68899999999999998776443
Q ss_pred ----------------------EEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEe-cC-----------
Q psy15421 179 ----------------------SFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF-PG----------- 224 (340)
Q Consensus 179 ----------------------~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~-~~----------- 224 (340)
.+.+|...|.+++|+|+++++++++.|++|++||++++.+...+ .+
T Consensus 297 l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s 376 (611)
T 1nr0_A 297 LVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 376 (611)
T ss_dssp EEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEEC
T ss_pred EEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEEC
Confidence 33478899999999999999999999999999999876543221 01
Q ss_pred ----------------------------------------------------------------------CCCCeEEEEE
Q psy15421 225 ----------------------------------------------------------------------HESDINAVTF 234 (340)
Q Consensus 225 ----------------------------------------------------------------------h~~~v~~v~~ 234 (340)
|...+.+++|
T Consensus 377 ~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~ 456 (611)
T 1nr0_A 377 SKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVAL 456 (611)
T ss_dssp TTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEE
T ss_pred CCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEE
Confidence 2345678999
Q ss_pred ecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCC-ceeeee--eccC
Q psy15421 235 FPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK-TERAGI--LAGH 311 (340)
Q Consensus 235 ~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~-~~~~~~--~~~h 311 (340)
+|+|+++|+|+.|+.|++||+.......... ..+...|++++|+|+|++|++++.|++|++|+..+ ++.... +.+|
T Consensus 457 spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H 535 (611)
T 1nr0_A 457 SNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFH 535 (611)
T ss_dssp CTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCC
T ss_pred eCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeec
Confidence 9999999999999999999998654321111 22334699999999999999999999999999877 555443 3459
Q ss_pred CcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 312 DNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 312 ~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
...|++++|+|||++|+|||.|++|+|||
T Consensus 536 ~~~V~~v~fspdg~~lasgs~D~~v~lW~ 564 (611)
T 1nr0_A 536 TAKVACVSWSPDNVRLATGSLDNSVIVWN 564 (611)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ccceeEEEECCCCCEEEEEECCCcEEEEE
Confidence 99999999999999999999999999996
No 15
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.1e-46 Score=335.65 Aligned_cols=280 Identities=24% Similarity=0.449 Sum_probs=241.7
Q ss_pred CccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCC------------------CcEEEEEECCCCCEEEE
Q psy15421 53 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRS------------------SWVMTCAYAPSGSFVAC 114 (340)
Q Consensus 53 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~------------------~~i~~v~~~~~~~~l~~ 114 (340)
+|.+.|.+++|+||+++|++++ |+++++|++.+++.+..+..+. ..|.+++|+|++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999876 7899999999998877665443 24899999999999999
Q ss_pred EeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCC-CeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEc
Q psy15421 115 GGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD-NQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLA 193 (340)
Q Consensus 115 ~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~ 193 (340)
|+.|+.|++||+.++ .....+.+|...|.++.|.++ ..+++++.|++|++||+++++....+. +...+.+++++
T Consensus 141 ~~~d~~i~iwd~~~~----~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~ 215 (393)
T 1erj_A 141 GAEDRLIRIWDIENR----KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVS 215 (393)
T ss_dssp EETTSCEEEEETTTT----EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEEC
T ss_pred EcCCCeEEEEECCCC----cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEE
Confidence 999999999999764 345667899999999999876 478899999999999999988766654 56779999999
Q ss_pred C-CCCEEEEEeCCCcEEEEECCCCeeeeEe-------cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcE-----
Q psy15421 194 P-DMRTFVSGACDASAKLWDIRDGSCKQTF-------PGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE----- 260 (340)
Q Consensus 194 ~-~~~~~~sg~~dg~i~~wd~~~~~~~~~~-------~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~----- 260 (340)
| +++++++|+.||.|++||++++.++..+ .+|...|.+++|+|++.++++|+.|+.|++||++....
T Consensus 216 ~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~ 295 (393)
T 1erj_A 216 PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK 295 (393)
T ss_dssp STTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----------
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCccccc
Confidence 9 8999999999999999999998877666 57999999999999999999999999999999875322
Q ss_pred -------EEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECC------CCCEE
Q psy15421 261 -------LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTE------DGMAV 327 (340)
Q Consensus 261 -------~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~------d~~~l 327 (340)
...+ ..+...|.+++|+|++++|++|+.|+.|++||..+++++..+.+|.+.|.+++|++ ++.+|
T Consensus 296 ~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l 373 (393)
T 1erj_A 296 TPNSGTCEVTY--IGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVF 373 (393)
T ss_dssp -----CEEEEE--ECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEE
T ss_pred CCCCCcceEEE--ecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEE
Confidence 1111 12334589999999999999999999999999999999999999999999999986 68899
Q ss_pred EEeeCCCcEEecC
Q psy15421 328 ATGSWDSFLRIWN 340 (340)
Q Consensus 328 ~s~s~D~~i~iW~ 340 (340)
+|||.||+|+||+
T Consensus 374 ~sgs~Dg~i~iW~ 386 (393)
T 1erj_A 374 ATGSGDCKARIWK 386 (393)
T ss_dssp EEEETTSEEEEEE
T ss_pred EEECCCCcEEECc
Confidence 9999999999996
No 16
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=9.8e-46 Score=323.93 Aligned_cols=290 Identities=24% Similarity=0.382 Sum_probs=245.2
Q ss_pred eeeEEeEEecCccCcEEEEEEcCC-CCeEEEEeCCCeEEEEeCCCCC-----eeEEeeCCCCcEEEEEECCCCCEEEEEe
Q psy15421 43 IQMRTRRTLRGHLAKIYAMHWGSD-SRNLVSASQDGKLIVWDSYTTN-----KVHAIPLRSSWVMTCAYAPSGSFVACGG 116 (340)
Q Consensus 43 ~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~d~~i~iwd~~~~~-----~~~~~~~~~~~i~~v~~~~~~~~l~~~~ 116 (340)
.+...+.+|+||.+.|++++|+|+ +++|+|||.|++|+|||+.+.+ ....+.+|...|.+++|+|++++|++++
T Consensus 26 ~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~ 105 (340)
T 4aow_A 26 EQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGS 105 (340)
T ss_dssp CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEc
Confidence 344567789999999999999998 5799999999999999987654 3466788999999999999999999999
Q ss_pred CCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCC-CeEEEEeCCCeEEEEECCCCceE-EEEecCCCCeEEEEEcC
Q psy15421 117 LDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD-NQIVTSSGDMSCALWDIETGQQC-ASFIGHTGDVMSLSLAP 194 (340)
Q Consensus 117 ~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~-~~~~~~~~~v~~~~~~~ 194 (340)
.|+.+++|+..... .......+...+....+.+. ..+++++.|+.+++||+...... ....+|...+..++|++
T Consensus 106 ~d~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~ 181 (340)
T 4aow_A 106 WDGTLRLWDLTTGT----TTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 181 (340)
T ss_dssp TTSEEEEEETTTTE----EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECS
T ss_pred ccccceEEeecccc----eeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEcc
Confidence 99999999986543 22334455666666666654 57899999999999999766543 33457889999999988
Q ss_pred CC--CEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccc
Q psy15421 195 DM--RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICG 272 (340)
Q Consensus 195 ~~--~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~ 272 (340)
++ .++++++.|+.|++||++++++...+.+|..+|++++|+|++.+|++|+.|+.|++||+++.+.+..+.... .
T Consensus 182 ~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~---~ 258 (340)
T 4aow_A 182 NSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD---I 258 (340)
T ss_dssp CSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSS---C
T ss_pred CCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCc---e
Confidence 65 468899999999999999999999999999999999999999999999999999999999988877765443 5
Q ss_pred eEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeee---------ccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 273 ITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL---------AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 273 i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~---------~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
+.++.|+|++.++ +++.|+.|++||..+......+ .+|...|++++|+|||++|++|+.||+|+|||
T Consensus 259 v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~ 334 (340)
T 4aow_A 259 INALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQ 334 (340)
T ss_dssp EEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 8999999987665 5567899999998877655443 46889999999999999999999999999996
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6.9e-46 Score=350.51 Aligned_cols=286 Identities=17% Similarity=0.248 Sum_probs=251.8
Q ss_pred EeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCC--eeEEeeCCCCcEEEEEECCCCCEEEEEeCCC----e
Q psy15421 47 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTN--KVHAIPLRSSWVMTCAYAPSGSFVACGGLDN----I 120 (340)
Q Consensus 47 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~----~ 120 (340)
..++|.+|.+.|++++|+|++++|+||+.|++|+|||+.+++ ....+..|...|.+++|+|++++|++++.+. .
T Consensus 51 ~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~ 130 (611)
T 1nr0_A 51 DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH 130 (611)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEE
T ss_pred cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeE
Confidence 456789999999999999999999999999999999986543 4567788999999999999999999988763 6
Q ss_pred EEEEEccCCCCceEEEEeecCCCcceEEEEEcCCC--eEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCE
Q psy15421 121 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN--QIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRT 198 (340)
Q Consensus 121 v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 198 (340)
|++|+.. . ....+.+|...|.++.|++++ .+++++.|++|++||..+++....+.+|...|.+++|+|++++
T Consensus 131 v~~wd~~--~----~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~ 204 (611)
T 1nr0_A 131 VFLFDTG--T----SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSL 204 (611)
T ss_dssp EEETTTC--C----BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSE
T ss_pred EEEeeCC--C----CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCE
Confidence 7777742 2 224567899999999998875 5899999999999999998888899999999999999999999
Q ss_pred EEEEeCCCcEEEEECCCCeeeeEec-------CCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecC-Ccc
Q psy15421 199 FVSGACDASAKLWDIRDGSCKQTFP-------GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD-NII 270 (340)
Q Consensus 199 ~~sg~~dg~i~~wd~~~~~~~~~~~-------~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~-~~~ 270 (340)
+++|+.|++|++||+.++++...+. +|.+.|.+++|+|++.+|++++.|++|++||+.+++.+..+... ...
T Consensus 205 las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~ 284 (611)
T 1nr0_A 205 FASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIE 284 (611)
T ss_dssp EEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGG
T ss_pred EEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCcc
Confidence 9999999999999999998888774 79999999999999999999999999999999988777665432 222
Q ss_pred cceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 271 CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 271 ~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
.....+.| +++.+++++.|+.+++|+...++....+.+|...|++++|+|||++|++|+.|++|++||
T Consensus 285 ~~~~~~~~--~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd 352 (611)
T 1nr0_A 285 DQQLGIIW--TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWD 352 (611)
T ss_dssp GCEEEEEE--CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ceeEEEEE--cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Confidence 33556666 678999999999999999988888888899999999999999999999999999999996
No 18
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.5e-45 Score=345.57 Aligned_cols=283 Identities=28% Similarity=0.518 Sum_probs=252.7
Q ss_pred EEeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Q psy15421 46 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYS 125 (340)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~ 125 (340)
+..+.+.+|...|++++|+|+++.|++++.|++|++||.. ++.+..+..|...+.+++|+|+++++++++.|+.+++|+
T Consensus 294 ~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~ 372 (577)
T 2ymu_A 294 QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 372 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEc
Confidence 3456789999999999999999999999999999999975 456677888999999999999999999999999999999
Q ss_pred ccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeC
Q psy15421 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGAC 204 (340)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~ 204 (340)
... .....+.+|...+.++.|++++ .+++++.|+.|++||. +++.+..+.+|...+.+++|+|+++++++++.
T Consensus 373 ~~~-----~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~ 446 (577)
T 2ymu_A 373 RNG-----QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASD 446 (577)
T ss_dssp TTC-----CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred CCC-----CEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcC
Confidence 532 2345677899999999998765 6888999999999996 56778889999999999999999999999999
Q ss_pred CCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcE
Q psy15421 205 DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRL 284 (340)
Q Consensus 205 dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 284 (340)
|++|++||. +++.+..+.+|..+|.+++|+|+++++++++.|+.|++||.. ++.+..+. .+...|++++|+|++++
T Consensus 447 d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~~~~~~~--~h~~~v~~l~~s~dg~~ 522 (577)
T 2ymu_A 447 DKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLT--GHSSSVRGVAFSPDGQT 522 (577)
T ss_dssp TSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SCEEEEEE--CCSSCEEEEEECTTSSC
T ss_pred CCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CCEEEEEe--CCCCCEEEEEEcCCCCE
Confidence 999999996 567778889999999999999999999999999999999964 45554443 23346999999999999
Q ss_pred EEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 285 LLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 285 l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
|++|+.|+.|++|| .+++++..+.+|.+.|++++|+|||++|+|+|.|++|++||
T Consensus 523 l~s~~~dg~v~lwd-~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 523 IASASDDKTVKLWN-RNGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEEETTSEEEEEC-TTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEECcCEEEEEe-CCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 99999999999999 47788899999999999999999999999999999999998
No 19
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-44 Score=318.77 Aligned_cols=286 Identities=17% Similarity=0.282 Sum_probs=256.7
Q ss_pred EeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Q psy15421 47 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSL 126 (340)
Q Consensus 47 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~ 126 (340)
....|.+|.+.|++++|+|++++|++++.||.|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.|++|++
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 44678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCC-----CeEEEEECCCCc-----------eEEEEecCCC--Ce
Q psy15421 127 KTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGD-----MSCALWDIETGQ-----------QCASFIGHTG--DV 187 (340)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d-----~~v~iwd~~~~~-----------~~~~~~~~~~--~v 187 (340)
.++. ....+. +...+.++.|.+++ .+++++.+ +.|.+||+..+. ....+..|.. .+
T Consensus 104 ~~~~----~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (369)
T 3zwl_B 104 SNGQ----CVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAA 178 (369)
T ss_dssp TTCC----EEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCE
T ss_pred CCCc----EEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccce
Confidence 7654 222333 77789999998765 57778888 999999987653 3344556666 89
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCC-CeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeec
Q psy15421 188 MSLSLAPDMRTFVSGACDASAKLWDIRD-GSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSH 266 (340)
Q Consensus 188 ~~~~~~~~~~~~~sg~~dg~i~~wd~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~ 266 (340)
.+++|+|+++++++++.||.|++||+++ +.....+..|...|.+++|+|++.+|++++.|+.|++||+++.+.+..+.+
T Consensus 179 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 258 (369)
T 3zwl_B 179 TVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYET 258 (369)
T ss_dssp EEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred eEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecC
Confidence 9999999999999999999999999998 788888999999999999999999999999999999999998888777653
Q ss_pred CCcccceEEEEEcCCCcEEEEEeCCC--------------cEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeC
Q psy15421 267 DNIICGITSVAFSRSGRLLLAGYDDF--------------NCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW 332 (340)
Q Consensus 267 ~~~~~~i~~~~~s~~~~~l~~g~~d~--------------~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~ 332 (340)
. ..+.+++|+|+++++++++.++ .+++|+..+++.+..+.+|...|++++|+|++++|++|+.
T Consensus 259 ~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 335 (369)
T 3zwl_B 259 D---CPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGE 335 (369)
T ss_dssp S---SCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred C---CCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcC
Confidence 3 3589999999999999999988 8999999999999999999999999999999999999999
Q ss_pred CCcEEecC
Q psy15421 333 DSFLRIWN 340 (340)
Q Consensus 333 D~~i~iW~ 340 (340)
||.|++|+
T Consensus 336 dg~v~iw~ 343 (369)
T 3zwl_B 336 DGFIRLHH 343 (369)
T ss_dssp TSEEEEEE
T ss_pred CCeEEEEE
Confidence 99999996
No 20
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9.1e-45 Score=347.86 Aligned_cols=287 Identities=24% Similarity=0.389 Sum_probs=246.4
Q ss_pred EEeEEecCccCcEEEEEEcCCC-CeEEEEeCCCeEEEEeCCCCC-----eeEEeeCCCCcEEEEEECCCCCEEEEEeCCC
Q psy15421 46 RTRRTLRGHLAKIYAMHWGSDS-RNLVSASQDGKLIVWDSYTTN-----KVHAIPLRSSWVMTCAYAPSGSFVACGGLDN 119 (340)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~i~iwd~~~~~-----~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~ 119 (340)
+.+..+++|.+.|++++|+|++ ++|+||+.|++|++||+.+.. ....+.+|...|.+++|+|++++|++|+.|+
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg 452 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG 452 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 4456789999999999999875 689999999999999987543 3457789999999999999999999999999
Q ss_pred eEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEEEE---ecCCCCeEEEEEcCC
Q psy15421 120 ICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCASF---IGHTGDVMSLSLAPD 195 (340)
Q Consensus 120 ~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~---~~~~~~v~~~~~~~~ 195 (340)
+|++||+.++. ....+.+|...|.++.|++++ .+++++.|++|++||.......... .+|...|.+++|+|+
T Consensus 453 ~v~vwd~~~~~----~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 528 (694)
T 3dm0_A 453 ELRLWDLAAGV----STRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPN 528 (694)
T ss_dssp EEEEEETTTTE----EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSC
T ss_pred cEEEEECCCCc----ceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCC
Confidence 99999997652 445677999999999998764 6999999999999998754333222 358889999999998
Q ss_pred C--CEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccce
Q psy15421 196 M--RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGI 273 (340)
Q Consensus 196 ~--~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i 273 (340)
+ ..+++|+.|++|++||++++++...+.+|...|++++|+|++.+|++|+.|+.|++||+++++.+..+... ..+
T Consensus 529 ~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~---~~v 605 (694)
T 3dm0_A 529 TLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN---SVI 605 (694)
T ss_dssp SSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCS---SCE
T ss_pred CCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCC---CcE
Confidence 6 57999999999999999999999999999999999999999999999999999999999988877655433 358
Q ss_pred EEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCC-------------------cceEEEEECCCCCEEEEeeCCC
Q psy15421 274 TSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHD-------------------NRVSCLGVTEDGMAVATGSWDS 334 (340)
Q Consensus 274 ~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~-------------------~~i~~~~~s~d~~~l~s~s~D~ 334 (340)
.+++|+|++.+|+++++ +.|++||..+.+.+..+..|. -.+++++|||||++|+|||.||
T Consensus 606 ~~~~~sp~~~~l~~~~~-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg 684 (694)
T 3dm0_A 606 HALCFSPNRYWLCAATE-HGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDG 684 (694)
T ss_dssp EEEEECSSSSEEEEEET-TEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEcCCCcEEEEEcC-CCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCC
Confidence 99999999998888765 459999999888776554321 2378999999999999999999
Q ss_pred cEEecC
Q psy15421 335 FLRIWN 340 (340)
Q Consensus 335 ~i~iW~ 340 (340)
+|+|||
T Consensus 685 ~i~iW~ 690 (694)
T 3dm0_A 685 VIRVWG 690 (694)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 999996
No 21
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.2e-44 Score=323.91 Aligned_cols=293 Identities=16% Similarity=0.193 Sum_probs=256.6
Q ss_pred eEEeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCC------eeEEeeCCCCcEEEEEECCC----C---CE
Q psy15421 45 MRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTN------KVHAIPLRSSWVMTCAYAPS----G---SF 111 (340)
Q Consensus 45 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~------~~~~~~~~~~~i~~v~~~~~----~---~~ 111 (340)
...++.+++|.+.|++++|+| ++|++++.||+|++||+.+.+ .+..+..|...|.+++|+|+ + .+
T Consensus 6 ~~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~ 83 (397)
T 1sq9_A 6 IATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 83 (397)
T ss_dssp EEEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEE
T ss_pred hhhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccE
Confidence 456678999999999999998 799999999999999999887 67888899999999999999 9 99
Q ss_pred EEEEeCCCeEEEEEccCCCCceE-EEEeecCC-----CcceEEEEEc----CCC-e-EEEEeCCCeEEEEECCC------
Q psy15421 112 VACGGLDNICSIYSLKTREGNVR-VSRELPGH-----TGYLSCCRFL----DDN-Q-IVTSSGDMSCALWDIET------ 173 (340)
Q Consensus 112 l~~~~~d~~v~i~~~~~~~~~~~-~~~~~~~~-----~~~v~~~~~~----~~~-~-l~~~~~d~~v~iwd~~~------ 173 (340)
|++++.|+.|++|++..+..... ....+..| ...+.++.|. +++ . +++++.|+.|++||+.+
T Consensus 84 l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 84 VATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp EEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred EEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccc
Confidence 99999999999999987653211 14556677 5889999998 654 6 88899999999999988
Q ss_pred CceEE-----EEe-------cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEecC---C---CCCeEEEEEe
Q psy15421 174 GQQCA-----SFI-------GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG---H---ESDINAVTFF 235 (340)
Q Consensus 174 ~~~~~-----~~~-------~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~---h---~~~v~~v~~~ 235 (340)
++.+. .+. .|...+.+++|+|++ .+++|+.||.|++||+++++.+..+.. | ..+|.+++|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~ 242 (397)
T 1sq9_A 164 SLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 242 (397)
T ss_dssp HTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC
T ss_pred cceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEEC
Confidence 66555 664 488899999999999 999999999999999999999999988 9 9999999999
Q ss_pred cCCCEEEEEeCC---CcEEEEeCcCCcEEEEeecCC-----------cccceEEEEEcCCCcEEEEEeCCCcEEEEeCCC
Q psy15421 236 PNGWAFATGSDD---ATCRLFDIRADQELAMYSHDN-----------IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 301 (340)
Q Consensus 236 ~~~~~l~s~s~d---~~i~iwd~~~~~~~~~~~~~~-----------~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~ 301 (340)
|++.+|++++.| +.|++||+++.+.+..+.... +...|.+++|+|++++|++|+.|+.|++||..+
T Consensus 243 ~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 322 (397)
T 1sq9_A 243 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 322 (397)
T ss_dssp SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred CCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 999999999999 999999999888776664310 345699999999999999999999999999999
Q ss_pred ceeeeeec------cC---------------CcceEEEEECCCC----------CEEEEeeCCCcEEecC
Q psy15421 302 TERAGILA------GH---------------DNRVSCLGVTEDG----------MAVATGSWDSFLRIWN 340 (340)
Q Consensus 302 ~~~~~~~~------~h---------------~~~i~~~~~s~d~----------~~l~s~s~D~~i~iW~ 340 (340)
++.+..+. +| ...|++++|+|+| .+|++|+.||.|++||
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 323 KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR 392 (397)
T ss_dssp TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred CceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence 99999888 88 9999999999998 7999999999999996
No 22
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.1e-43 Score=332.98 Aligned_cols=283 Identities=27% Similarity=0.489 Sum_probs=252.5
Q ss_pred EEeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Q psy15421 46 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYS 125 (340)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~ 125 (340)
+....+.+|...|.+++|+|+++.|++++.|++|++||. +++....+..|...|.+++|+|++.++++++.|+.+++|+
T Consensus 253 ~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~ 331 (577)
T 2ymu_A 253 QLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 331 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 345678999999999999999999999999999999996 4667788889999999999999999999999999999999
Q ss_pred ccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeC
Q psy15421 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGAC 204 (340)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~ 204 (340)
.... ....+.+|...+.++.|.+++ .+++++.|+.+++||. +++.+..+.+|...|.+++|+|+++++++++.
T Consensus 332 ~~~~-----~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~ 405 (577)
T 2ymu_A 332 RNGQ-----HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASD 405 (577)
T ss_dssp TTSC-----EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred CCCC-----eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeC
Confidence 7543 234567899999999998765 6888999999999996 56778888999999999999999999999999
Q ss_pred CCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcE
Q psy15421 205 DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRL 284 (340)
Q Consensus 205 dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 284 (340)
|+.|++||. +++....+.+|..+|++++|+|+++++++++.|+.|++||... +.+..+. .+...|.+++|+|++++
T Consensus 406 d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-~~~~~~~--~~~~~v~~~~~spd~~~ 481 (577)
T 2ymu_A 406 DKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG-QLLQTLT--GHSSSVRGVAFSPDGQT 481 (577)
T ss_dssp TSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS-CEEEEEE--CCSSCEEEEEECTTSCE
T ss_pred CCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC-CEEEEEc--CCCCCEEEEEEcCCCCE
Confidence 999999995 5677888999999999999999999999999999999999754 3443332 22346999999999999
Q ss_pred EEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 285 LLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 285 l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
|++++.|++|++|+ .+++.+..+.+|...|++++|+|||++|++++.|++|+|||
T Consensus 482 las~~~d~~i~iw~-~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 482 IASASDDKTVKLWN-RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN 536 (577)
T ss_dssp EEEEETTSEEEEEE-TTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEeCCCEEEEEc-CCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEe
Confidence 99999999999999 57788889999999999999999999999999999999997
No 23
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.2e-43 Score=307.18 Aligned_cols=286 Identities=19% Similarity=0.325 Sum_probs=250.6
Q ss_pred EeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCee---EEee--CCCCcEEEEEECCCCCEEEEEeCCCeE
Q psy15421 47 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKV---HAIP--LRSSWVMTCAYAPSGSFVACGGLDNIC 121 (340)
Q Consensus 47 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~---~~~~--~~~~~i~~v~~~~~~~~l~~~~~d~~v 121 (340)
......+|.+.|.+++|+|++++|++++ ||.|++||+.+++.. ..+. .|...|.+++|+|+++++++++.|+.+
T Consensus 43 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 121 (337)
T 1gxr_A 43 RQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTL 121 (337)
T ss_dssp EEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEE
T ss_pred ccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcE
Confidence 3344558999999999999999999998 999999999876533 3333 688899999999999999999999999
Q ss_pred EEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEE
Q psy15421 122 SIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFV 200 (340)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 200 (340)
++|++..+.. .....+..|...+.++.|.+++ .+++++.|+.|++||+++++....+..|...+.+++|+|+++.++
T Consensus 122 ~~~d~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 199 (337)
T 1gxr_A 122 SIWDLAAPTP--RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLW 199 (337)
T ss_dssp EEEECCCC----EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEEECCCCCc--ceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEE
Confidence 9999976542 2345567888999999998764 688899999999999999999999999999999999999999999
Q ss_pred EEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcC
Q psy15421 201 SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR 280 (340)
Q Consensus 201 sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~ 280 (340)
+++.||.|++||+++++....+. |..++.+++|+|++.++++++.|+.|++||++..+...... +...+.+++|+|
T Consensus 200 ~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~---~~~~v~~~~~~~ 275 (337)
T 1gxr_A 200 TGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHL---HESCVLSLKFAY 275 (337)
T ss_dssp EEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECC---CSSCEEEEEECT
T ss_pred EEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcC---CccceeEEEECC
Confidence 99999999999999998877775 77889999999999999999999999999999876654333 334699999999
Q ss_pred CCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 281 SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 281 ~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
++++|++++.|+.|++|+..+++.+.. ..|...|++++|+|++++|++++.||.|++||
T Consensus 276 ~~~~l~~~~~dg~i~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 276 CGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEE-EECSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred CCCEEEEecCCCcEEEEECCCCeEEEE-ecCCCcEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 999999999999999999988877644 46899999999999999999999999999996
No 24
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-43 Score=306.73 Aligned_cols=283 Identities=19% Similarity=0.361 Sum_probs=252.5
Q ss_pred EEeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Q psy15421 46 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYS 125 (340)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~ 125 (340)
...++|++|.+.|.+++| |++++|++++.||.|++||+.+++....+..|...|.+++|+|++.++++++.|+.+++|+
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 87 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVP 87 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 566889999999999999 9999999999999999999998888888899999999999999999999999999999999
Q ss_pred ccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcC-CCCEEEEEeC
Q psy15421 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAP-DMRTFVSGAC 204 (340)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~sg~~ 204 (340)
+...... .....+.+|...+.++.| +++.+++++.|+.|++|| .++....+..|...+.++++.| ++..+++++.
T Consensus 88 ~~~~~~~-~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 163 (313)
T 3odt_A 88 LFATSGE-DPLYTLIGHQGNVCSLSF-QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASA 163 (313)
T ss_dssp TTCCTTS-CC-CEECCCSSCEEEEEE-ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEET
T ss_pred eeecCCC-CcccchhhcccCEEEEEe-cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEEC
Confidence 8764322 234456789999999988 567899999999999999 5677888889999999999988 8999999999
Q ss_pred CCcEEEEECCCCeeeeEecC-CCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCc
Q psy15421 205 DASAKLWDIRDGSCKQTFPG-HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGR 283 (340)
Q Consensus 205 dg~i~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 283 (340)
||.|++|| .++....+.. |...+.+++|+|++. +++++.|+.|++||+++.+.+..+.. +...|++++|+|++
T Consensus 164 d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~- 237 (313)
T 3odt_A 164 DKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEG--HESFVYCIKLLPNG- 237 (313)
T ss_dssp TSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECTTS-
T ss_pred CCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhc--CCceEEEEEEecCC-
Confidence 99999999 4556667776 899999999999997 99999999999999998887776642 23469999999999
Q ss_pred EEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 284 LLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 284 ~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
.|++|+.|+.|++||..+++....+..|...|++++|+|+++ +++++.||.|++||
T Consensus 238 ~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~ 293 (313)
T 3odt_A 238 DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFS 293 (313)
T ss_dssp CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEE
T ss_pred CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEe
Confidence 588999999999999999999999999999999999999998 66799999999996
No 25
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.5e-44 Score=319.90 Aligned_cols=288 Identities=16% Similarity=0.245 Sum_probs=243.0
Q ss_pred EEeEEecCccCcEEEEEEcCCC-CeEEEEeCCCeEEEEeCCCCCeeEEee--CCCCcEEEEEECC-CCCEEEEEeCCCeE
Q psy15421 46 RTRRTLRGHLAKIYAMHWGSDS-RNLVSASQDGKLIVWDSYTTNKVHAIP--LRSSWVMTCAYAP-SGSFVACGGLDNIC 121 (340)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~i~~v~~~~-~~~~l~~~~~d~~v 121 (340)
...+.+.+|.+.|++++|+|++ ++|++|+.||.|++||+.+++....+. .|...|.+++|+| ++.+|++++.|+.|
T Consensus 64 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i 143 (383)
T 3ei3_B 64 KLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGAT 143 (383)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEE
T ss_pred ceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEE
Confidence 4566889999999999999999 999999999999999999888776665 5899999999999 78999999999999
Q ss_pred EEEEccCCCCceEEEEeecCCCcceEEEEEcCC-CeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCC-EE
Q psy15421 122 SIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD-NQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMR-TF 199 (340)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~ 199 (340)
++|++.. ...........|...+.++.|+++ ..+++++.|+.|++||+ .++.+..+.+|...|.+++|+|+++ ++
T Consensus 144 ~iwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l 220 (383)
T 3ei3_B 144 TLRDFSG--SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLM 220 (383)
T ss_dssp EEEETTS--CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEE
T ss_pred EEEECCC--CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEE
Confidence 9999974 222233333455688999999876 46889999999999999 5778888999999999999999999 89
Q ss_pred EEEeCCCcEEEEECCC----CeeeeEecCCCCCeEEEEEec-CCCEEEEEeCCCcEEEEeCcCCcEEEEee-cCC----c
Q psy15421 200 VSGACDASAKLWDIRD----GSCKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRADQELAMYS-HDN----I 269 (340)
Q Consensus 200 ~sg~~dg~i~~wd~~~----~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~----~ 269 (340)
++|+.|+.|++||+++ +.+...+ +|...|.+++|+| ++.+|++++.|+.|++||+++.+.+..+. +.. +
T Consensus 221 ~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 299 (383)
T 3ei3_B 221 ATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQH 299 (383)
T ss_dssp EEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTT
T ss_pred EEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccccc
Confidence 9999999999999987 5566666 6999999999999 99999999999999999998765543332 110 0
Q ss_pred c----------cceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeecc--CCcceEEEEECCCCCEEEEeeCCCcEE
Q psy15421 270 I----------CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG--HDNRVSCLGVTEDGMAVATGSWDSFLR 337 (340)
Q Consensus 270 ~----------~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~--h~~~i~~~~~s~d~~~l~s~s~D~~i~ 337 (340)
. ..+..++|+|++++ +|+.|+.|++||..+++.+..+.+ |...+.+++|+|++.+|++|+ |+.|+
T Consensus 300 ~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~ 376 (383)
T 3ei3_B 300 LTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNIL 376 (383)
T ss_dssp SCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEE
T ss_pred ccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEE
Confidence 1 22445667777766 778999999999999999888877 567788889999999999998 99999
Q ss_pred ecC
Q psy15421 338 IWN 340 (340)
Q Consensus 338 iW~ 340 (340)
|||
T Consensus 377 iw~ 379 (383)
T 3ei3_B 377 IWN 379 (383)
T ss_dssp EEE
T ss_pred EEe
Confidence 996
No 26
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6.5e-44 Score=308.56 Aligned_cols=248 Identities=23% Similarity=0.377 Sum_probs=221.4
Q ss_pred CeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCC-CeEEEEeCCCeE
Q psy15421 88 NKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD-NQIVTSSGDMSC 166 (340)
Q Consensus 88 ~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~d~~v 166 (340)
+...++..|...|.+++|+|++.+|++++.|+.|++|++.++. ....+..|...+.++.|.++ +.+++++.|++|
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i 79 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQV----EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRI 79 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE----EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc----eeEEeeccCCcEEEEEEeCCCCEEEEECCCCEE
Confidence 3456788999999999999999999999999999999997652 44567789999999999765 578999999999
Q ss_pred EEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC-eeeeEecCCCCCeEEEEEec-CCCEEEEE
Q psy15421 167 ALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG-SCKQTFPGHESDINAVTFFP-NGWAFATG 244 (340)
Q Consensus 167 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~-~~~~~~~~h~~~v~~v~~~~-~~~~l~s~ 244 (340)
++||+.+++.+..+.+|.+.|.+++|+|+++++++|+.||+|++||++++ .+...+.+|...|.+++|+| ++..|++|
T Consensus 80 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg 159 (304)
T 2ynn_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (304)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEE
T ss_pred EEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999887 55677899999999999999 67899999
Q ss_pred eCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcC--CCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECC
Q psy15421 245 SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR--SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTE 322 (340)
Q Consensus 245 s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~ 322 (340)
+.|+.|++||++.......+.. .....+..+.|+| ++++|++|+.|++|++||..+++++..+.+|...|++++|+|
T Consensus 160 s~D~~v~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p 238 (304)
T 2ynn_A 160 CLDRTVKVWSLGQSTPNFTLTT-GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP 238 (304)
T ss_dssp ETTSEEEEEETTCSSCSEEEEC-CCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS
T ss_pred eCCCeEEEEECCCCCccceecc-CCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECC
Confidence 9999999999987655443322 2234588889976 788999999999999999999999999999999999999999
Q ss_pred CCCEEEEeeCCCcEEecC
Q psy15421 323 DGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 323 d~~~l~s~s~D~~i~iW~ 340 (340)
++.+|+|||.||+|+|||
T Consensus 239 ~~~~l~s~s~Dg~i~iWd 256 (304)
T 2ynn_A 239 TLPIIISGSEDGTLKIWN 256 (304)
T ss_dssp SSSEEEEEETTSCEEEEE
T ss_pred CCCEEEEEcCCCeEEEEE
Confidence 999999999999999996
No 27
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-43 Score=318.68 Aligned_cols=279 Identities=15% Similarity=0.274 Sum_probs=251.0
Q ss_pred ccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCce
Q psy15421 54 HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNV 133 (340)
Q Consensus 54 h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~ 133 (340)
|.+.|.+++|+|++++|++++.||.|++|| .+++.+..+..|...|.+++|+|++++|++++.|+.+++|++.++.
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--- 182 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGT--- 182 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTE---
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCc---
Confidence 688999999999999999999999999999 6778888899999999999999999999999999999999997653
Q ss_pred EEEEeecCCCcc---------------eEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCE
Q psy15421 134 RVSRELPGHTGY---------------LSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRT 198 (340)
Q Consensus 134 ~~~~~~~~~~~~---------------v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 198 (340)
....+..+... +.++.|.+++.+++++.++.|.+||+.+++....+..|...+.+++|+|++++
T Consensus 183 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 261 (425)
T 1r5m_A 183 -VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKL 261 (425)
T ss_dssp -EEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTE
T ss_pred -EEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCE
Confidence 23344444444 77778888889999999999999999999888888899999999999999999
Q ss_pred EEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEE
Q psy15421 199 FVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAF 278 (340)
Q Consensus 199 ~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~ 278 (340)
+++++.||.|++||+++++....+.+|...|.+++|+|++ ++++++.|+.|++||+++.+.+..+.. +...+.+++|
T Consensus 262 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~ 338 (425)
T 1r5m_A 262 LLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIV--DGVPIFAGRI 338 (425)
T ss_dssp EEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEEC--TTCCEEEEEE
T ss_pred EEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEeccc--CCccEEEEEE
Confidence 9999999999999999998888999999999999999999 999999999999999998877766543 2346999999
Q ss_pred cCCCcEEEEEeCCCcEEEEeCCCce--------------------eeeeeccCCc--ceEEEEECCCCCEEEEeeCCCcE
Q psy15421 279 SRSGRLLLAGYDDFNCNVWDSMKTE--------------------RAGILAGHDN--RVSCLGVTEDGMAVATGSWDSFL 336 (340)
Q Consensus 279 s~~~~~l~~g~~d~~i~iw~~~~~~--------------------~~~~~~~h~~--~i~~~~~s~d~~~l~s~s~D~~i 336 (340)
+|++++|++|+.|+.|++|+..+.+ .+..+.+|.. .|++++|+|++++|++++.||.|
T Consensus 339 s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 418 (425)
T 1r5m_A 339 SQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEG 418 (425)
T ss_dssp CTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCC
T ss_pred cCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceE
Confidence 9999999999999999999998877 7888999977 99999999999999999999999
Q ss_pred EecC
Q psy15421 337 RIWN 340 (340)
Q Consensus 337 ~iW~ 340 (340)
++||
T Consensus 419 ~iw~ 422 (425)
T 1r5m_A 419 SVVA 422 (425)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9996
No 28
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-44 Score=326.65 Aligned_cols=295 Identities=14% Similarity=0.204 Sum_probs=242.2
Q ss_pred eeEEeEEe-cCccCcEEEEEEcC-CCCeEEEEeCCCeEEEEeCCC---CC---eeEEeeCCCCcEEEEEECCCCCEEEEE
Q psy15421 44 QMRTRRTL-RGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSYT---TN---KVHAIPLRSSWVMTCAYAPSGSFVACG 115 (340)
Q Consensus 44 ~~~~~~~~-~~h~~~v~~~~~s~-~~~~l~s~~~d~~i~iwd~~~---~~---~~~~~~~~~~~i~~v~~~~~~~~l~~~ 115 (340)
..+...++ ++|.+.|++++|+| ++++|++|+.||+|++||+.+ +. ....+ .|...|.+++|+|++.+|+++
T Consensus 51 ~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~ 129 (437)
T 3gre_A 51 RGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVS 129 (437)
T ss_dssp CCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEE
T ss_pred cceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEE
Confidence 33455677 89999999999999 999999999999999999865 32 22233 488999999999999999999
Q ss_pred eCCCeEEEEEcc---CCCCce----EEEEee--cC--CCcceEEEEE--cCC-CeEEEEeCCCeEEEEECCCCceEEEEe
Q psy15421 116 GLDNICSIYSLK---TREGNV----RVSREL--PG--HTGYLSCCRF--LDD-NQIVTSSGDMSCALWDIETGQQCASFI 181 (340)
Q Consensus 116 ~~d~~v~i~~~~---~~~~~~----~~~~~~--~~--~~~~v~~~~~--~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~ 181 (340)
+.|+.|++|++. .+.... .....+ .. +...+.++.+ .++ ..+++++.|+.|++||+++++.+..+.
T Consensus 130 s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 209 (437)
T 3gre_A 130 SKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIE 209 (437)
T ss_dssp ETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEc
Confidence 999999999985 221110 001111 11 4455666553 333 478899999999999999999999998
Q ss_pred c--CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEec-CCCCCeEEEEEec----CCCEEEEEeCCCcEEEEe
Q psy15421 182 G--HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP-GHESDINAVTFFP----NGWAFATGSDDATCRLFD 254 (340)
Q Consensus 182 ~--~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~-~h~~~v~~v~~~~----~~~~l~s~s~d~~i~iwd 254 (340)
. |.+.|.+++|+|+++++++|+.||.|++||+++++++..+. +|..+|.+++|+| ++.++++|+.|+.|++||
T Consensus 210 ~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd 289 (437)
T 3gre_A 210 NSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWN 289 (437)
T ss_dssp CCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEE
T ss_pred cCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEE
Confidence 8 89999999999999999999999999999999999988876 7888999996664 678999999999999999
Q ss_pred CcCCcEEEEeecC------------------------CcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeecc
Q psy15421 255 IRADQELAMYSHD------------------------NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG 310 (340)
Q Consensus 255 ~~~~~~~~~~~~~------------------------~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~ 310 (340)
+++++.+..+... .+...|++++|+ ++++|++|+.|+.|++||+.+++....+.+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 290 FVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp TTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEEC
T ss_pred cCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEec
Confidence 9988766555311 134458999999 789999999999999999988877666654
Q ss_pred -------------------------------------CCcceEEEEECCC--CCEEEEeeCCCcEEecC
Q psy15421 311 -------------------------------------HDNRVSCLGVTED--GMAVATGSWDSFLRIWN 340 (340)
Q Consensus 311 -------------------------------------h~~~i~~~~~s~d--~~~l~s~s~D~~i~iW~ 340 (340)
|.+.|++++|+++ +.+|+||+.||.|+||+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 369 PSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp C--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 8899999999998 78999999999999996
No 29
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.4e-43 Score=311.58 Aligned_cols=285 Identities=19% Similarity=0.270 Sum_probs=245.9
Q ss_pred ecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCC--eeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccC
Q psy15421 51 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTN--KVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKT 128 (340)
Q Consensus 51 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~ 128 (340)
+..|.++|++++|+|++++|++++.|+.|++||..+++ .+..+..|...|.+++|+|++++|++++.|+.+++|++..
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 45699999999999999999999999999999998887 7788889999999999999999999999999999999975
Q ss_pred CCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCce---EEEE-ecCCCCeEEEEEcCCCCEEEEEe
Q psy15421 129 REGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQ---CASF-IGHTGDVMSLSLAPDMRTFVSGA 203 (340)
Q Consensus 129 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~---~~~~-~~~~~~v~~~~~~~~~~~~~sg~ 203 (340)
+. ......+..|...+.++.|.+++ .+++++.|+.|++||+..++. ...+ ..|...+.+++|+|+++++++|+
T Consensus 84 ~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 161 (372)
T 1k8k_C 84 RT--WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS 161 (372)
T ss_dssp TE--EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE
T ss_pred Ce--eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc
Confidence 43 22334456788999999998764 688899999999999988763 2333 56889999999999999999999
Q ss_pred CCCcEEEEECC------------------CCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEee
Q psy15421 204 CDASAKLWDIR------------------DGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS 265 (340)
Q Consensus 204 ~dg~i~~wd~~------------------~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 265 (340)
.||.|++||++ .++++..+.+|...|.+++|+|++.+|++++.|+.|++||+++.+.+..+.
T Consensus 162 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 241 (372)
T 1k8k_C 162 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA 241 (372)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc
Confidence 99999999953 677888888999999999999999999999999999999999888877664
Q ss_pred cCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCC--ce--------------------------------ee------
Q psy15421 266 HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK--TE--------------------------------RA------ 305 (340)
Q Consensus 266 ~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~--~~--------------------------------~~------ 305 (340)
.. ...+.+++|+|++++|++| .|+.|++|+..+ ++ ..
T Consensus 242 ~~--~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (372)
T 1k8k_C 242 SE--TLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAG 318 (372)
T ss_dssp CS--SCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------
T ss_pred cC--CCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccc
Confidence 32 3468999999999999888 999999999876 31 00
Q ss_pred eee-ccCCcceEEEEEC-CCC---CEEEEeeCCCcEEecC
Q psy15421 306 GIL-AGHDNRVSCLGVT-EDG---MAVATGSWDSFLRIWN 340 (340)
Q Consensus 306 ~~~-~~h~~~i~~~~~s-~d~---~~l~s~s~D~~i~iW~ 340 (340)
..+ .+|.+.|++++|. ++| .+|+||+.||.|++||
T Consensus 319 ~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~ 358 (372)
T 1k8k_C 319 AGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 358 (372)
T ss_dssp CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEE
T ss_pred ccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEE
Confidence 223 4899999999965 777 9999999999999996
No 30
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.4e-43 Score=304.18 Aligned_cols=247 Identities=19% Similarity=0.344 Sum_probs=226.8
Q ss_pred EeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Q psy15421 47 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSL 126 (340)
Q Consensus 47 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~ 126 (340)
....+.||...|.+++|+++++.+++++.|++|++||+.+++.+..+..+...+.+++|+|++++|++++.++.+++|++
T Consensus 72 ~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~ 151 (321)
T 3ow8_A 72 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGV 151 (321)
T ss_dssp EEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEET
T ss_pred eeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEc
Confidence 34578999999999999999999999999999999999999999999988888999999999999999999999999999
Q ss_pred cCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCC
Q psy15421 127 KTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACD 205 (340)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~d 205 (340)
..+. ....+..|...+.++.|++++ .|++++.|+.|++||+++++.+..+.+|...|.+++|+|+++++++|+.|
T Consensus 152 ~~~~----~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~d 227 (321)
T 3ow8_A 152 ESGK----KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDD 227 (321)
T ss_dssp TTCS----EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTT
T ss_pred CCCc----eeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCC
Confidence 7654 234566788889999998765 68889999999999999999999999999999999999999999999999
Q ss_pred CcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEE
Q psy15421 206 ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLL 285 (340)
Q Consensus 206 g~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 285 (340)
|+|++||++++.+...+.+|...|.+++|+|++.+|++++.|+.|++||+.+.+.+..+. .+...|.+++|+|++++|
T Consensus 228 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~--~h~~~v~~v~~s~~g~~l 305 (321)
T 3ow8_A 228 GYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFF--DHQDQVWGVKYNGNGSKI 305 (321)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC--CCSSCEEEEEECTTSSEE
T ss_pred CeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEc--CCCCcEEEEEECCCCCEE
Confidence 999999999999999999999999999999999999999999999999999888777653 233469999999999999
Q ss_pred EEEeCCCcEEEEeC
Q psy15421 286 LAGYDDFNCNVWDS 299 (340)
Q Consensus 286 ~~g~~d~~i~iw~~ 299 (340)
++++.|++|++||.
T Consensus 306 ~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 306 VSVGDDQEIHIYDC 319 (321)
T ss_dssp EEEETTCCEEEEEC
T ss_pred EEEeCCCeEEEEeC
Confidence 99999999999995
No 31
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=8.1e-44 Score=314.52 Aligned_cols=284 Identities=18% Similarity=0.287 Sum_probs=240.6
Q ss_pred EEecCccCcEEEEEEcCC----CCeEEEEeCCCeEEEEeCCCCCeeEEeeC-----CCCcEEEEEECCC----CCEEEEE
Q psy15421 49 RTLRGHLAKIYAMHWGSD----SRNLVSASQDGKLIVWDSYTTNKVHAIPL-----RSSWVMTCAYAPS----GSFVACG 115 (340)
Q Consensus 49 ~~~~~h~~~v~~~~~s~~----~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-----~~~~i~~v~~~~~----~~~l~~~ 115 (340)
....+|.++|++++|+|+ ...+++++.++.|++||..+++.+..+.. |...|.+++|+|+ +.+|++|
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 345699999999999984 55677778888999999988776655543 5578999999998 6799999
Q ss_pred eCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcC-C-CeEEEEeCCCeEEEEECCCCceEEEE---ecCCCCeEEE
Q psy15421 116 GLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD-D-NQIVTSSGDMSCALWDIETGQQCASF---IGHTGDVMSL 190 (340)
Q Consensus 116 ~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~l~~~~~d~~v~iwd~~~~~~~~~~---~~~~~~v~~~ 190 (340)
+.|+.|++|++.+++ ....+.+|...+.++.|.+ + ..+++++.|+.|++||+++++....+ ..|...+.++
T Consensus 92 ~~dg~i~v~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~ 167 (366)
T 3k26_A 92 GSRGIIRIINPITMQ----CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSA 167 (366)
T ss_dssp ETTCEEEEECTTTCC----EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEE
T ss_pred cCCCEEEEEEchhce----EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEE
Confidence 999999999987653 3455678999999999986 4 46889999999999999999888887 6799999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCeeeeEec----------------------------CCCCCeEEEEEecCCCEEE
Q psy15421 191 SLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP----------------------------GHESDINAVTFFPNGWAFA 242 (340)
Q Consensus 191 ~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~----------------------------~h~~~v~~v~~~~~~~~l~ 242 (340)
+|+|+++++++++.||.|++||+++++....+. +|...|.+++|+ +.+++
T Consensus 168 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~ 245 (366)
T 3k26_A 168 DYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLIL 245 (366)
T ss_dssp EECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEE
T ss_pred EECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEE
Confidence 999999999999999999999998876543333 399999999999 67999
Q ss_pred EEeCCCcEEEEeCcCCcE--------------EEEeecCCcccceEEEEEcCC--CcEEEEEeCCCcEEEEeCCCceee-
Q psy15421 243 TGSDDATCRLFDIRADQE--------------LAMYSHDNIICGITSVAFSRS--GRLLLAGYDDFNCNVWDSMKTERA- 305 (340)
Q Consensus 243 s~s~d~~i~iwd~~~~~~--------------~~~~~~~~~~~~i~~~~~s~~--~~~l~~g~~d~~i~iw~~~~~~~~- 305 (340)
+++.|+.|++||+.+... +..+. .+...|++++|+|+ +++|++|+.||.|++||..+++..
T Consensus 246 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 323 (366)
T 3k26_A 246 SKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD--YSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHK 323 (366)
T ss_dssp EECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEE--CSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGG
T ss_pred EEecCCEEEEEeCCCccccccccccCCcchheecccc--ccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCcc
Confidence 999999999999876533 22222 23345889999999 999999999999999999877543
Q ss_pred ---eeeccC--CcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 306 ---GILAGH--DNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 306 ---~~~~~h--~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
..+.+| ...|++++|+|++++|++|+.||.|++||
T Consensus 324 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 363 (366)
T 3k26_A 324 AKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWD 363 (366)
T ss_dssp CEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEE
Confidence 367777 79999999999999999999999999996
No 32
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=7.1e-43 Score=314.49 Aligned_cols=247 Identities=23% Similarity=0.408 Sum_probs=225.8
Q ss_pred EeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Q psy15421 47 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSL 126 (340)
Q Consensus 47 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~ 126 (340)
..+++++|.+.|.+++|+|++++|++|+.|++|++||+.+.+.+..+.+|...|.+++|+|++.++++|+.|++|++||+
T Consensus 142 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~ 221 (410)
T 1vyh_C 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 221 (410)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCC----------
Q psy15421 127 KTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPD---------- 195 (340)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~---------- 195 (340)
.++. ....+.+|...+.++.+.+++ .+++++.|+.|++||+.+++....+.+|...|.+++|+|+
T Consensus 222 ~~~~----~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 297 (410)
T 1vyh_C 222 QTGY----CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEAT 297 (410)
T ss_dssp TTCC----EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCC
T ss_pred CCCc----EEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhc
Confidence 7653 345677899999999998765 6888999999999999999998999999999999999996
Q ss_pred ----------CCEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEee
Q psy15421 196 ----------MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS 265 (340)
Q Consensus 196 ----------~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 265 (340)
+.++++|+.|++|++||++++.++..+.+|...|++++|+|++.+|++|+.|+.|++||+.+.+.+..+.
T Consensus 298 ~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~ 377 (410)
T 1vyh_C 298 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377 (410)
T ss_dssp SCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE
T ss_pred cccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEc
Confidence 5689999999999999999999999999999999999999999999999999999999998877766553
Q ss_pred cCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeC
Q psy15421 266 HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 299 (340)
Q Consensus 266 ~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~ 299 (340)
.+...|++++|+|++++|++|+.|++|++|+.
T Consensus 378 --~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 378 --AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp --CCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred --CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 22346999999999999999999999999985
No 33
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=9e-43 Score=306.94 Aligned_cols=289 Identities=15% Similarity=0.221 Sum_probs=239.5
Q ss_pred eEEecCccCcEEEEEEcCCCCeEE-EEeC---CCeEEEEeCCCCCeeEEe-eCCCCcEEEEEECCC---CCEEEEEeCCC
Q psy15421 48 RRTLRGHLAKIYAMHWGSDSRNLV-SASQ---DGKLIVWDSYTTNKVHAI-PLRSSWVMTCAYAPS---GSFVACGGLDN 119 (340)
Q Consensus 48 ~~~~~~h~~~v~~~~~s~~~~~l~-s~~~---d~~i~iwd~~~~~~~~~~-~~~~~~i~~v~~~~~---~~~l~~~~~d~ 119 (340)
.+.+++|.+.|.+++|+|+++.++ +++. |+.|++||+.+++..... ..|...|.+++|+|+ +.+|++|+.|+
T Consensus 11 ~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 11 AHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred hhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC
Confidence 456789999999999999997655 5554 999999999988765443 367889999999998 69999999999
Q ss_pred eEEEEEccCCCCceEEEEeecCCCcceEEEEE------cCC-CeEEEEeCCCeEEEEECCCCc-eEEEEecCCC----Ce
Q psy15421 120 ICSIYSLKTREGNVRVSRELPGHTGYLSCCRF------LDD-NQIVTSSGDMSCALWDIETGQ-QCASFIGHTG----DV 187 (340)
Q Consensus 120 ~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~-~~l~~~~~d~~v~iwd~~~~~-~~~~~~~~~~----~v 187 (340)
.|++|++..+.. ....+.+|...+.++.| +++ ..+++++.|+.|++||+++++ ....+..|.+ .+
T Consensus 91 ~i~iwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v 167 (357)
T 3i2n_A 91 NLHIWNLEAPEM---PVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDC 167 (357)
T ss_dssp CEEEECTTSCSS---CSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCE
T ss_pred eEEEEeCCCCCc---cEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCce
Confidence 999999987542 23456789999999865 333 478999999999999999886 6667766554 78
Q ss_pred EEEE----EcCCCCEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEec---CCCEEEEEeCCCcEEEEeCcCCcE
Q psy15421 188 MSLS----LAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP---NGWAFATGSDDATCRLFDIRADQE 260 (340)
Q Consensus 188 ~~~~----~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~---~~~~l~s~s~d~~i~iwd~~~~~~ 260 (340)
.+++ |+|+++++++|+.||.|++||+++++.... ..|...|.+++|+| ++.++++++.||.|++||+++.+.
T Consensus 168 ~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 246 (357)
T 3i2n_A 168 WTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHP 246 (357)
T ss_dssp EEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEET
T ss_pred EEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCc
Confidence 8888 788999999999999999999999887544 56889999999999 899999999999999999986544
Q ss_pred EEEee---cCCcccceEEEEEcCCCc-EEEEEeCCCcEEEEeCCCc-------------------eeeeeeccCCcceEE
Q psy15421 261 LAMYS---HDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKT-------------------ERAGILAGHDNRVSC 317 (340)
Q Consensus 261 ~~~~~---~~~~~~~i~~~~~s~~~~-~l~~g~~d~~i~iw~~~~~-------------------~~~~~~~~h~~~i~~ 317 (340)
...+. ...+...|++++|+|+++ +|++|+.|+.|++|+..+. +.+..+.+|...|++
T Consensus 247 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~ 326 (357)
T 3i2n_A 247 TKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISS 326 (357)
T ss_dssp TTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEE
T ss_pred ccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeE
Confidence 32221 113345699999999999 8999999999999997643 456678899999999
Q ss_pred EEECCCCCEEE-EeeCCCcEEecC
Q psy15421 318 LGVTEDGMAVA-TGSWDSFLRIWN 340 (340)
Q Consensus 318 ~~~s~d~~~l~-s~s~D~~i~iW~ 340 (340)
++|+|++.+|+ +|+.|+.|+|||
T Consensus 327 ~~~s~~~~~l~~s~~~d~~i~iw~ 350 (357)
T 3i2n_A 327 LDWSPDKRGLCVCSSFDQTVRVLI 350 (357)
T ss_dssp EEECSSSTTEEEEEETTSEEEEEE
T ss_pred EEEcCCCCeEEEEecCCCcEEEEE
Confidence 99999999998 899999999996
No 34
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.8e-42 Score=309.74 Aligned_cols=280 Identities=21% Similarity=0.424 Sum_probs=243.5
Q ss_pred ecCccCcEE--EEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeC-CCCcEEEEEECCCCCEEEEEeCCCeEEEEEcc
Q psy15421 51 LRGHLAKIY--AMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPL-RSSWVMTCAYAPSGSFVACGGLDNICSIYSLK 127 (340)
Q Consensus 51 ~~~h~~~v~--~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~ 127 (340)
..+|.+.++ +++|+ +..+++++.|+.|++||..+++....+.. |...|.+++|+|++.+|++|+.|+.|++|++.
T Consensus 87 ~~~~~~~~~~~~~~~s--~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~ 164 (401)
T 4aez_A 87 APGIIDDYYLNLLDWS--NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVE 164 (401)
T ss_dssp CTTCCCCTTCBCEEEC--TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCCcCCceEEEEeec--CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECc
Confidence 347776644 45555 45788999999999999999988777765 78899999999999999999999999999997
Q ss_pred CCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECC-CCceEEEEecCCCCeEEEEEcCCCCEEEEEeCCC
Q psy15421 128 TREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIE-TGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDA 206 (340)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg 206 (340)
++. ....+.+|...+.++.| ++..+++++.|+.|++||++ .......+.+|.+.+.+++|+|+++++++|+.||
T Consensus 165 ~~~----~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 239 (401)
T 4aez_A 165 SQT----KLRTMAGHQARVGCLSW-NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN 239 (401)
T ss_dssp TCC----EEEEECCCSSCEEEEEE-ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCe----EEEEecCCCCceEEEEE-CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC
Confidence 653 44567789999999998 45689999999999999998 4566788889999999999999999999999999
Q ss_pred cEEEEECCCCeeeeEecCCCCCeEEEEEecCC-CEEEEEe--CCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCc
Q psy15421 207 SAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WAFATGS--DDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGR 283 (340)
Q Consensus 207 ~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s--~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 283 (340)
.|++||+++++....+.+|...|.+++|+|++ ..+++|+ .|+.|++||+.+++.+..+.+. ..+.+++|+|+++
T Consensus 240 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~---~~v~~~~~s~~~~ 316 (401)
T 4aez_A 240 VVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG---SQVTSLIWSPHSK 316 (401)
T ss_dssp CEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS---SCEEEEEECSSSS
T ss_pred eEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC---CcEEEEEECCCCC
Confidence 99999999999988999999999999999976 5666655 7999999999988888777543 3599999999999
Q ss_pred EEEE--EeCCCcEEEEeCCCcee--eeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 284 LLLA--GYDDFNCNVWDSMKTER--AGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 284 ~l~~--g~~d~~i~iw~~~~~~~--~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
++++ |+.|+.|++|+..+.+. ...+.+|...|.+++|+|+|.+|++++.||.|++||
T Consensus 317 ~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~ 377 (401)
T 4aez_A 317 EIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWR 377 (401)
T ss_dssp EEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEE
T ss_pred eEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 9999 55899999999888544 345779999999999999999999999999999996
No 35
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.7e-43 Score=319.67 Aligned_cols=288 Identities=15% Similarity=0.210 Sum_probs=229.7
Q ss_pred EEecCccCcEEEEEEcC-CCCeEEEEeCCCeEEEEeCCCCCee--EEeeCCCCcEEEEEECC-CCCEEEEEeCCCeEEEE
Q psy15421 49 RTLRGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSYTTNKV--HAIPLRSSWVMTCAYAP-SGSFVACGGLDNICSIY 124 (340)
Q Consensus 49 ~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~i~iwd~~~~~~~--~~~~~~~~~i~~v~~~~-~~~~l~~~~~d~~v~i~ 124 (340)
+...+|...|++|+|+| ++++||+|+.||+|+|||+.+++.. ..+.+|...|.+++|+| ++.+|++|+.|++|++|
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 45678899999999999 5678999999999999999877644 34567999999999998 68999999999999999
Q ss_pred EccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCC-EEEEE
Q psy15421 125 SLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMR-TFVSG 202 (340)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~sg 202 (340)
|+... ..........+...+.++.|.+++ .+++++.|+.|++||++. +.+..+.+|...|.+++|+|++. ++++|
T Consensus 193 d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 193 DFKGN--ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp ETTSC--EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEE
T ss_pred eccCC--ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEe
Confidence 98643 222222233344556777787654 688899999999999974 56677889999999999999876 67799
Q ss_pred eCCCcEEEEECCCCeeeeE---ecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEee-cCCc---ccceEE
Q psy15421 203 ACDASAKLWDIRDGSCKQT---FPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS-HDNI---ICGITS 275 (340)
Q Consensus 203 ~~dg~i~~wd~~~~~~~~~---~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~---~~~i~~ 275 (340)
+.|++|++||+++.+.... ..+|..+|++++|+|+|.+|++++.|+.|++||+.+......+. +... ...+..
T Consensus 270 s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (435)
T 4e54_B 270 SVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIK 349 (435)
T ss_dssp ETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCB
T ss_pred cCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEE
Confidence 9999999999988765433 35799999999999999999999999999999998766544332 2110 112334
Q ss_pred EEEcCCCcEEEEEe------------CCCcEEEEeCCCceeeeee-ccCCcceEEE-EECCCCCEEEEeeCCCcEEecC
Q psy15421 276 VAFSRSGRLLLAGY------------DDFNCNVWDSMKTERAGIL-AGHDNRVSCL-GVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 276 ~~~s~~~~~l~~g~------------~d~~i~iw~~~~~~~~~~~-~~h~~~i~~~-~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
+.|+|++.++++++ .++.|++||..+++.+..+ .+|...|.++ +|+|+|.+|++|+ |++|+|||
T Consensus 350 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~ 427 (435)
T 4e54_B 350 AAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWS 427 (435)
T ss_dssp CEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECC
T ss_pred EEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEE
Confidence 56777777776664 3467999999999887765 4788889887 6999999999887 88999997
No 36
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-43 Score=318.73 Aligned_cols=287 Identities=13% Similarity=0.164 Sum_probs=247.1
Q ss_pred cCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCC----CCeeEEeeCCCCcEEEEEECCC-CCEEEEEeCCCeEEEEEc
Q psy15421 52 RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYT----TNKVHAIPLRSSWVMTCAYAPS-GSFVACGGLDNICSIYSL 126 (340)
Q Consensus 52 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~----~~~~~~~~~~~~~i~~v~~~~~-~~~l~~~~~d~~v~i~~~ 126 (340)
..|...|.+++|+|++++|++++.||.|++||+.+ .+.+..+..|...|.+++|+|+ +.+|++++.|+.|++|++
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence 36889999999999999999999999999999987 3577788899999999999998 899999999999999999
Q ss_pred cCCCC-----ceEEEEeecCCCcceEEEEEcCC--CeEEEEeCCCeEEEEECCCCceEEEEecC------CCCeEEEEEc
Q psy15421 127 KTREG-----NVRVSRELPGHTGYLSCCRFLDD--NQIVTSSGDMSCALWDIETGQQCASFIGH------TGDVMSLSLA 193 (340)
Q Consensus 127 ~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~--~~l~~~~~d~~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~ 193 (340)
..... ..........|...+.++.|.++ ..+++++.|+.|++||+++++....+..+ ...+.+++|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 223 (416)
T 2pm9_A 144 NKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWH 223 (416)
T ss_dssp TTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEEC
T ss_pred CCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEEC
Confidence 87641 11112234578889999999876 46888899999999999999888888776 7889999999
Q ss_pred CCC-CEEEEEeCCC---cEEEEECCCC-eeeeEec-CCCCCeEEEEEec-CCCEEEEEeCCCcEEEEeCcCCcEEEEeec
Q psy15421 194 PDM-RTFVSGACDA---SAKLWDIRDG-SCKQTFP-GHESDINAVTFFP-NGWAFATGSDDATCRLFDIRADQELAMYSH 266 (340)
Q Consensus 194 ~~~-~~~~sg~~dg---~i~~wd~~~~-~~~~~~~-~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~ 266 (340)
|++ .++++++.|+ .|++||++++ .....+. +|...|.+++|+| ++.+|++++.|+.|++||+++.+.+..+..
T Consensus 224 ~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~ 303 (416)
T 2pm9_A 224 PKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA 303 (416)
T ss_dssp SSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC
T ss_pred CCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC
Confidence 997 6899999999 9999999986 5677787 8999999999999 899999999999999999998887776643
Q ss_pred CCcccceEEEEEcCCC-cEEEEEeCCCcEEEEeCCCceeeeeec-----------------------------------c
Q psy15421 267 DNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILA-----------------------------------G 310 (340)
Q Consensus 267 ~~~~~~i~~~~~s~~~-~~l~~g~~d~~i~iw~~~~~~~~~~~~-----------------------------------~ 310 (340)
+...|.+++|+|++ .+|++++.|+.|++|++.+........ .
T Consensus 304 --~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (416)
T 2pm9_A 304 --RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTW 381 (416)
T ss_dssp --SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCST
T ss_pred --CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCcc
Confidence 23468899999999 899999999999999987655332221 1
Q ss_pred CCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 311 HDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 311 h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
|..++.+++|+|||++|++|+.|++|+||+
T Consensus 382 ~~~~~~~~~~s~dg~~la~~~~d~~v~~w~ 411 (416)
T 2pm9_A 382 YGEPSPAAHWAFGGKLVQITPDGKGVSITN 411 (416)
T ss_dssp TCCCSCCCEEETTTEEECBCTTSSCBCCBC
T ss_pred ccCCccceEEeeCCeEEEEeCCCCeEEEEE
Confidence 677888999999999999999999999997
No 37
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.2e-43 Score=311.99 Aligned_cols=275 Identities=17% Similarity=0.207 Sum_probs=207.3
Q ss_pred EEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeC------CCeEEEEEccCCCCceE
Q psy15421 61 MHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGL------DNICSIYSLKTREGNVR 134 (340)
Q Consensus 61 ~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~------d~~v~i~~~~~~~~~~~ 134 (340)
+.+.+++.+ ++++.+.....|++... ....|...|.+++|+|||++|++|+. |+.+++|+...+.....
T Consensus 11 ~d~g~~~~~-~~~~g~~~~~~w~~p~~----~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~ 85 (357)
T 4g56_B 11 VDLGTENLY-FQSNGSSKGSAWGRPVT----APACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNES 85 (357)
T ss_dssp ----------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGG
T ss_pred CCCCccceE-EecCCCccccccCCCCC----CcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCccee
Confidence 444455544 44555677899986533 23468899999999999999999997 67889998766543322
Q ss_pred EEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEE----EEecCCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q psy15421 135 VSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCA----SFIGHTGDVMSLSLAPDMRTFVSGACDASAKL 210 (340)
Q Consensus 135 ~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~ 210 (340)
......+|...|.++.|.+++.+++++.|++|++||+.+++... ...+|...|.+++|+|+++++++|+.||+|++
T Consensus 86 ~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~i 165 (357)
T 4g56_B 86 LCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKV 165 (357)
T ss_dssp GCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred EecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence 23334568888999999999999999999999999998876432 34579999999999999999999999999999
Q ss_pred EECCCCeeeeEecCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCC-CcEEEEE
Q psy15421 211 WDIRDGSCKQTFPGHESDINAVTFFPNGW-AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRS-GRLLLAG 288 (340)
Q Consensus 211 wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~g 288 (340)
||+++++++..+++|...|++++|+|++. ++++++.|+.|++||+++.+....+........+++++|+|+ +.+|++|
T Consensus 166 wd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g 245 (357)
T 4g56_B 166 WDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACG 245 (357)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEE
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEe
Confidence 99999999999999999999999999874 789999999999999998776655443344456899999997 5689999
Q ss_pred eCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCC-CEEEEeeCCCcEEecC
Q psy15421 289 YDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG-MAVATGSWDSFLRIWN 340 (340)
Q Consensus 289 ~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~-~~l~s~s~D~~i~iW~ 340 (340)
+.|+.|++||..+++....+.+|...|++++|+|++ .+|++||.|++|+|||
T Consensus 246 ~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd 298 (357)
T 4g56_B 246 DETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLD 298 (357)
T ss_dssp ESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEEC
T ss_pred ecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEE
Confidence 999999999999999999999999999999999987 5799999999999997
No 38
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.7e-41 Score=306.43 Aligned_cols=273 Identities=22% Similarity=0.422 Sum_probs=235.2
Q ss_pred EEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEee--CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEE
Q psy15421 58 IYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIP--LRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRV 135 (340)
Q Consensus 58 v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~ 135 (340)
+..|+|+++ +.|+ ++.|++|+|||+.+++....+. .|...|.+++|+|+|++|++|+.|+.|++|++.++ ..
T Consensus 108 ~~~l~wS~~-n~lA-vgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~----~~ 181 (420)
T 4gga_A 108 LNLVDWSSG-NVLA-VALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ----KR 181 (420)
T ss_dssp CBCEEECTT-SEEE-EEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT----EE
T ss_pred ceeEEECCC-CEEE-EEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC----cE
Confidence 456899975 4555 5569999999999998876655 56778999999999999999999999999999765 34
Q ss_pred EEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCc-eEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy15421 136 SRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQ-QCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIR 214 (340)
Q Consensus 136 ~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~ 214 (340)
...+.+|...+.++.+. +..+++++.|+.+.+||..... .+..+.+|...+..+.++|++.++++++.|+.+++||..
T Consensus 182 ~~~~~~h~~~v~~~s~~-~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~ 260 (420)
T 4gga_A 182 LRNMTSHSARVGSLSWN-SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 260 (420)
T ss_dssp EEEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred EEEEeCCCCceEEEeeC-CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeec
Confidence 56778999999888774 5678899999999999988654 557788999999999999999999999999999999998
Q ss_pred CCe----eeeEecCCCCCeEEEEEecCCC-EEEE--EeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEE
Q psy15421 215 DGS----CKQTFPGHESDINAVTFFPNGW-AFAT--GSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLA 287 (340)
Q Consensus 215 ~~~----~~~~~~~h~~~v~~v~~~~~~~-~l~s--~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 287 (340)
+++ .+.....|...|.+++|+|.+. .+++ |+.|+.|++||+.+++.+..+.... .+.++.|+|+++.+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~---~v~~~~~~~~~~~lv~ 337 (420)
T 4gga_A 261 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS---QVCSILWSPHYKELIS 337 (420)
T ss_dssp CCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS---CEEEEEEETTTTEEEE
T ss_pred cccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc---ceeeeeecCCCCeEEE
Confidence 765 3456678999999999999754 5554 4579999999999988877665433 4889999999999887
Q ss_pred Ee--CCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 288 GY--DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 288 g~--~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
++ .|+.|++||..+++++..+.+|.+.|++++|+|||++|+|||.|++|+|||
T Consensus 338 ~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWd 392 (420)
T 4gga_A 338 GHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWR 392 (420)
T ss_dssp EECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred EEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence 65 799999999999999999999999999999999999999999999999997
No 39
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=8e-43 Score=309.30 Aligned_cols=281 Identities=14% Similarity=0.117 Sum_probs=221.5
Q ss_pred CcEEEEEEcCCCCeEEEEeCCC-------eEEEEeCCCCCe----------eEEeeCCCCcEEEEEECCCCCEEEEE---
Q psy15421 56 AKIYAMHWGSDSRNLVSASQDG-------KLIVWDSYTTNK----------VHAIPLRSSWVMTCAYAPSGSFVACG--- 115 (340)
Q Consensus 56 ~~v~~~~~s~~~~~l~s~~~d~-------~i~iwd~~~~~~----------~~~~~~~~~~i~~v~~~~~~~~l~~~--- 115 (340)
-+|++++|+||+++|++||.|. .|++|++..... ...+..|...+.++++ ++..+++|
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~--~~~~~~~g~~~ 92 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDA--SKGIILVGCNE 92 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEE--ETTEEEEECCC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEe--CCCEEEEEECC
Confidence 4899999999999999998754 499999865542 1234567777777655 45566655
Q ss_pred --------eCCCeEEEEEccCCCCceEEEEee-----cCCCcceEEEEEcCCCe-EEE--EeCCCeEEEEECCCCceEEE
Q psy15421 116 --------GLDNICSIYSLKTREGNVRVSREL-----PGHTGYLSCCRFLDDNQ-IVT--SSGDMSCALWDIETGQQCAS 179 (340)
Q Consensus 116 --------~~d~~v~i~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~-l~~--~~~d~~v~iwd~~~~~~~~~ 179 (340)
+.|+.+++|++....+........ ..+..++.+++|++++. +++ ++.|++|++||+++++....
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~ 172 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE 172 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE
Confidence 457789999988766554433332 23445688899998875 443 44689999999999988877
Q ss_pred EecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeee--EecCCCCCeEEEEEecCCCEEEEEeCCC----cEEEE
Q psy15421 180 FIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ--TFPGHESDINAVTFFPNGWAFATGSDDA----TCRLF 253 (340)
Q Consensus 180 ~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~--~~~~h~~~v~~v~~~~~~~~l~s~s~d~----~i~iw 253 (340)
+. |...|.+++|+|+++++++++. +.+++|+..++.... ...+|...|.+++|+|++.++++++.|+ .+++|
T Consensus 173 ~~-~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~ 250 (365)
T 4h5i_A 173 IE-TRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKI 250 (365)
T ss_dssp EE-CSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEE
T ss_pred eC-CCCceEEEEEccCCceEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeec
Confidence 65 7788999999999999999875 556677766666543 3457888999999999999999999887 68889
Q ss_pred eCcCCcEEE--EeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeee-eccCCcceEEEEECCCCCEEEEe
Q psy15421 254 DIRADQELA--MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI-LAGHDNRVSCLGVTEDGMAVATG 330 (340)
Q Consensus 254 d~~~~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~-~~~h~~~i~~~~~s~d~~~l~s~ 330 (340)
++....... ......+..+|++++|+|+|++||+|+.|++|++||..+++++.. +.+|..+|++|+|||||++||||
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~ 330 (365)
T 4h5i_A 251 SIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASV 330 (365)
T ss_dssp EEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEE
T ss_pred ccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEE
Confidence 987654322 112223345699999999999999999999999999999998876 57999999999999999999999
Q ss_pred eCCCcEEecC
Q psy15421 331 SWDSFLRIWN 340 (340)
Q Consensus 331 s~D~~i~iW~ 340 (340)
|.|++|||||
T Consensus 331 S~D~tvrvw~ 340 (365)
T 4h5i_A 331 SAANTIHIIK 340 (365)
T ss_dssp ETTSEEEEEE
T ss_pred eCCCeEEEEE
Confidence 9999999996
No 40
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=6.4e-42 Score=300.82 Aligned_cols=243 Identities=18% Similarity=0.216 Sum_probs=206.3
Q ss_pred CccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEE----eeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccC
Q psy15421 53 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHA----IPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKT 128 (340)
Q Consensus 53 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~----~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~ 128 (340)
.|...|.+++|+|++ .|++|+.||+|+|||+.+++.+.. ..+|...|.+++|+|++++|++|+.|++|++||+.+
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 355789999999985 688999999999999998875543 448999999999999999999999999999999976
Q ss_pred CCCceEEEEeecCCCcceEEEEEcCCC--eEEEEeCCCeEEEEECCCCceEEEEe--cCCCCeEEEEEcCC-CCEEEEEe
Q psy15421 129 REGNVRVSRELPGHTGYLSCCRFLDDN--QIVTSSGDMSCALWDIETGQQCASFI--GHTGDVMSLSLAPD-MRTFVSGA 203 (340)
Q Consensus 129 ~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~d~~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~~~sg~ 203 (340)
+ .....+.+|...|.++.|.+++ .+++++.|++|++||+++++....+. .+...+.+++|+|+ ++++++|+
T Consensus 159 ~----~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~ 234 (344)
T 4gqb_B 159 Q----VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGD 234 (344)
T ss_dssp T----EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEE
T ss_pred C----cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEec
Confidence 5 3556788999999999997654 57899999999999999998877664 35567899999995 56788999
Q ss_pred CCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCC-CEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCC
Q psy15421 204 CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSG 282 (340)
Q Consensus 204 ~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 282 (340)
.||+|++||+++++++..+.+|...|++++|+|++ ++|++|+.|++|++||+.+++......| ...|++++|+|++
T Consensus 235 ~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H---~~~V~~v~~sp~~ 311 (344)
T 4gqb_B 235 ENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAH---RDFVRDATWSPLN 311 (344)
T ss_dssp TTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCC---SSCEEEEEECSSS
T ss_pred cCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCC---CCCEEEEEEeCCC
Confidence 99999999999999999999999999999999997 5799999999999999998876554333 4469999999998
Q ss_pred c-EEEEEeCCCcEEEEeCCCce
Q psy15421 283 R-LLLAGYDDFNCNVWDSMKTE 303 (340)
Q Consensus 283 ~-~l~~g~~d~~i~iw~~~~~~ 303 (340)
+ +|++|+.|++|++|++.+..
T Consensus 312 ~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 312 HSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp TTEEEEEETTSCEEEEECCC--
T ss_pred CeEEEEEcCCCeEEEEECCCCC
Confidence 6 57789999999999986643
No 41
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.1e-44 Score=318.58 Aligned_cols=286 Identities=14% Similarity=0.186 Sum_probs=228.1
Q ss_pred EecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCC--CeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEcc
Q psy15421 50 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTT--NKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLK 127 (340)
Q Consensus 50 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~--~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~ 127 (340)
.++.|.++|++++|+|++++|++++.|+.|++||+.++ +.+..+..|...|.+++|+|++++|++++.|+.|++|++.
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 34557789999999999999999999999999999887 6777888999999999999999999999999999999997
Q ss_pred CCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCce---EEEEec-CCCCeEEEEEcCCCCEEEEE
Q psy15421 128 TREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQ---CASFIG-HTGDVMSLSLAPDMRTFVSG 202 (340)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~---~~~~~~-~~~~v~~~~~~~~~~~~~sg 202 (340)
.+. .......+.+|...+.++.|.+++ .+++++.|+.|++||+++++. ...+.. |...+.+++|+|+++++++|
T Consensus 86 ~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 86 PDG-TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp ----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred CCC-ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence 654 122344567899999999998764 688999999999999998763 667777 99999999999999999999
Q ss_pred eCCCcEEEEECC------------------CCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcE----
Q psy15421 203 ACDASAKLWDIR------------------DGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE---- 260 (340)
Q Consensus 203 ~~dg~i~~wd~~------------------~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~---- 260 (340)
+.||.|++||++ .+++...+ +|...|.+++|+|++++|++++.|+.|++||+.+.+.
T Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 243 (377)
T 3dwl_C 165 CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRA 243 (377)
T ss_dssp ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEE
T ss_pred eCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCccee
Confidence 999999999985 34556666 8999999999999999999999999999999987765
Q ss_pred EEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCce-------------------------------------
Q psy15421 261 LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTE------------------------------------- 303 (340)
Q Consensus 261 ~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~------------------------------------- 303 (340)
+..+. .+...|.+++|+|++++|++|++++.+ +|+.....
T Consensus 244 ~~~~~--~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (377)
T 3dwl_C 244 LITVK--LSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTAL 320 (377)
T ss_dssp CCCEE--CSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC---------
T ss_pred eEeec--CCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccc
Confidence 33222 233469999999999999999888766 66543111
Q ss_pred --eee-------------eeccCCcceEEEEECCCC-C---EEEEeeCCCcEEecC
Q psy15421 304 --RAG-------------ILAGHDNRVSCLGVTEDG-M---AVATGSWDSFLRIWN 340 (340)
Q Consensus 304 --~~~-------------~~~~h~~~i~~~~~s~d~-~---~l~s~s~D~~i~iW~ 340 (340)
... ....|.+.|+++++.+++ . .|+|||.||.|+|||
T Consensus 321 ~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWd 376 (377)
T 3dwl_C 321 RSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWT 376 (377)
T ss_dssp ----------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEEC
T ss_pred cccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEec
Confidence 000 112399999999976543 3 699999999999997
No 42
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=6.5e-41 Score=290.55 Aligned_cols=273 Identities=21% Similarity=0.415 Sum_probs=232.5
Q ss_pred EEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEee--CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEE
Q psy15421 58 IYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIP--LRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRV 135 (340)
Q Consensus 58 v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~ 135 (340)
+..|+||+++ .|+ ++.|++|+|||+.+++.+..+. .|...|.+++|+|++++|++|+.|++|++|++.+++ .
T Consensus 28 ~~~l~WS~~~-~lA-vg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~----~ 101 (318)
T 4ggc_A 28 LNLVDWSSGN-VLA-VALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK----R 101 (318)
T ss_dssp CBCEEECTTS-EEE-EEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE----E
T ss_pred ceEEEECCCC-EEE-EEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce----e
Confidence 4679999876 554 5679999999999999877665 567789999999999999999999999999997653 4
Q ss_pred EEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCc-eEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy15421 136 SRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQ-QCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIR 214 (340)
Q Consensus 136 ~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~ 214 (340)
...+.+|...+.+..+ .+..+++++.++.+++|+..... .+..+.+|...+..+.+.++++++++++.||.|++||++
T Consensus 102 ~~~~~~h~~~~~~~~~-~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 180 (318)
T 4ggc_A 102 LRNMTSHSARVGSLSW-NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 180 (318)
T ss_dssp EEEEECCSSCEEEEEE-ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred EEEecCccceEEEeec-CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECC
Confidence 5567789888876655 34578899999999999988764 556778899999999999999999999999999999998
Q ss_pred CCee----eeEecCCCCCeEEEEEecCCCE---EEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEE
Q psy15421 215 DGSC----KQTFPGHESDINAVTFFPNGWA---FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLA 287 (340)
Q Consensus 215 ~~~~----~~~~~~h~~~v~~v~~~~~~~~---l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 287 (340)
+++. ......|...|.++++.|++.. +++++.++.|++||...........+. ..+..+.|+|++..+++
T Consensus 181 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~ 257 (318)
T 4ggc_A 181 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH---SQVCSILWSPHYKELIS 257 (318)
T ss_dssp CBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECS---SCEEEEEEETTTTEEEE
T ss_pred CCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccce---eeeeeeeecccccceEE
Confidence 7653 3445678889999999997653 357788999999999887766554433 34889999999998887
Q ss_pred Ee--CCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 288 GY--DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 288 g~--~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
++ .|+.|++||..+++++..+.+|.+.|++++|+|||++|+|||.|++|+|||
T Consensus 258 ~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd 312 (318)
T 4ggc_A 258 GHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWR 312 (318)
T ss_dssp EECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred EEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence 55 799999999999999999999999999999999999999999999999997
No 43
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-43 Score=326.82 Aligned_cols=285 Identities=13% Similarity=0.118 Sum_probs=225.1
Q ss_pred ccCcEEEEEEcCCC---------CeEEE-------------------EeCCCeEEEEeCCCCCee----EEeeCCCCcEE
Q psy15421 54 HLAKIYAMHWGSDS---------RNLVS-------------------ASQDGKLIVWDSYTTNKV----HAIPLRSSWVM 101 (340)
Q Consensus 54 h~~~v~~~~~s~~~---------~~l~s-------------------~~~d~~i~iwd~~~~~~~----~~~~~~~~~i~ 101 (340)
+.+.|++|+|+|++ ++||+ ++.|++|+|||+.+++.. ..+..|...|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 46788889998876 45554 568899999998776642 34566778899
Q ss_pred EEEECCC------CCEEEEEeCCCeEEEEEccCCCCc-------eEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEE
Q psy15421 102 TCAYAPS------GSFVACGGLDNICSIYSLKTREGN-------VRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCAL 168 (340)
Q Consensus 102 ~v~~~~~------~~~l~~~~~d~~v~i~~~~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~i 168 (340)
.++|+|+ +.+||+++.|++|++|++..+... ......+.+|...|.++.|++++.|++|+.||+|++
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~l 291 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAE 291 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEE
Confidence 9999996 579999999999999999765321 011235678999999999988789999999999999
Q ss_pred EECCCCc-eEEEEecCCCCeEEE--EEcCCC-CEEEEEeCCCcEEEEECCCCeeeeEecCCCC--CeEEEEEecCCCEEE
Q psy15421 169 WDIETGQ-QCASFIGHTGDVMSL--SLAPDM-RTFVSGACDASAKLWDIRDGSCKQTFPGHES--DINAVTFFPNGWAFA 242 (340)
Q Consensus 169 wd~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~--~v~~v~~~~~~~~l~ 242 (340)
||+++++ ....+.+|...|.++ +|+|++ .+|+||+.|++|++||++++++...+.+|.. .|.+++|+|++..++
T Consensus 292 WD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~ 371 (524)
T 2j04_B 292 FDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYI 371 (524)
T ss_dssp EETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEE
T ss_pred EECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEE
Confidence 9998764 445678999999999 578887 8999999999999999998887777766653 588999999999999
Q ss_pred EEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCC---------------------
Q psy15421 243 TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK--------------------- 301 (340)
Q Consensus 243 s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~--------------------- 301 (340)
+++.|++|++||++....+..+. .+...|++++|+|++++|++|+.|++|++|+...
T Consensus 372 s~~~d~tv~lwd~~~~~~~~~l~--gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v 449 (524)
T 2j04_B 372 YSDGASSLRAVPSRAAFAVHPLV--SRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKW 449 (524)
T ss_dssp EECSSSEEEEEETTCTTCCEEEE--ECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEEC
T ss_pred EeCCCCcEEEEECcccccceeee--cCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEe
Confidence 99999999999999877644432 2334699999999999999999999999987311
Q ss_pred -----------------------ceeeeeeccCCcceEEEEECCCCC---EEEEeeCCCcEEecC
Q psy15421 302 -----------------------TERAGILAGHDNRVSCLGVTEDGM---AVATGSWDSFLRIWN 340 (340)
Q Consensus 302 -----------------------~~~~~~~~~h~~~i~~~~~s~d~~---~l~s~s~D~~i~iW~ 340 (340)
+.....+.+|...|++|+|+|++. .||+|+.||+||||+
T Consensus 450 ~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~ 514 (524)
T 2j04_B 450 DYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEY 514 (524)
T ss_dssp BCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEE
T ss_pred ccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEE
Confidence 111234567889999999999964 999999999999995
No 44
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-43 Score=316.33 Aligned_cols=286 Identities=16% Similarity=0.275 Sum_probs=244.6
Q ss_pred ccCcEEEEEEcCCCC-eEEEE----------eCCCeEEEEeCCCCCe--eEEeeCCCCcEEEEEECCCCCEEEEEeCCCe
Q psy15421 54 HLAKIYAMHWGSDSR-NLVSA----------SQDGKLIVWDSYTTNK--VHAIPLRSSWVMTCAYAPSGSFVACGGLDNI 120 (340)
Q Consensus 54 h~~~v~~~~~s~~~~-~l~s~----------~~d~~i~iwd~~~~~~--~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~ 120 (340)
+...|.+++|+|+++ +|+++ +.|+.|++||+.+++. ......|...|.+++|+|++.+|++++.|+.
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 90 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGS 90 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSC
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCe
Confidence 445789999999987 89999 8999999999987752 2222357788999999999999999999999
Q ss_pred EEEEEccCCCCceEEEEeecCCCcceEEEEEcCC--CeEEEEeCCCeEEEEECCCCc------eEE---EEecCCCCeEE
Q psy15421 121 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD--NQIVTSSGDMSCALWDIETGQ------QCA---SFIGHTGDVMS 189 (340)
Q Consensus 121 v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~~~~~d~~v~iwd~~~~~------~~~---~~~~~~~~v~~ 189 (340)
|++|++............+.+|...|.++.|.++ ..+++++.|+.|++||+.+++ ... ....|...+.+
T Consensus 91 v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 170 (416)
T 2pm9_A 91 LELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVIS 170 (416)
T ss_dssp EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCE
T ss_pred EEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeE
Confidence 9999997633222355667889999999999864 478899999999999998876 322 23578899999
Q ss_pred EEEcCC-CCEEEEEeCCCcEEEEECCCCeeeeEecCC------CCCeEEEEEecCC-CEEEEEeCCC---cEEEEeCcCC
Q psy15421 190 LSLAPD-MRTFVSGACDASAKLWDIRDGSCKQTFPGH------ESDINAVTFFPNG-WAFATGSDDA---TCRLFDIRAD 258 (340)
Q Consensus 190 ~~~~~~-~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h------~~~v~~v~~~~~~-~~l~s~s~d~---~i~iwd~~~~ 258 (340)
++|+|+ +.++++++.||.|++||+++++.+..+..| ...|.+++|+|++ .++++++.|+ .|++||+++.
T Consensus 171 ~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 171 LAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp EEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred EEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 999999 789999999999999999999988888766 7889999999997 6899999999 9999999875
Q ss_pred -cEEEEeecCCcccceEEEEEcC-CCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCC-CEEEEeeCCCc
Q psy15421 259 -QELAMYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG-MAVATGSWDSF 335 (340)
Q Consensus 259 -~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~-~~l~s~s~D~~ 335 (340)
.++..+. ..+...|.+++|+| ++++|++|+.|+.|++||..+++.+..+.+|...|++++|+|++ .+|++++.|+.
T Consensus 251 ~~~~~~~~-~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~ 329 (416)
T 2pm9_A 251 NTPLQTLN-QGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNK 329 (416)
T ss_dssp TSCSBCCC-SCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSE
T ss_pred CCCcEEee-cCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCc
Confidence 3433332 02345699999999 99999999999999999999999999999999999999999999 89999999999
Q ss_pred EEecC
Q psy15421 336 LRIWN 340 (340)
Q Consensus 336 i~iW~ 340 (340)
|+|||
T Consensus 330 i~iw~ 334 (416)
T 2pm9_A 330 IEVQT 334 (416)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99996
No 45
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-41 Score=305.59 Aligned_cols=280 Identities=13% Similarity=0.180 Sum_probs=242.8
Q ss_pred cCccCcEEEEEEcCCCC-eEEEEeCCCeEEEEeC----CCCC------eeEEeeC----------CCCcEEEEEECCCCC
Q psy15421 52 RGHLAKIYAMHWGSDSR-NLVSASQDGKLIVWDS----YTTN------KVHAIPL----------RSSWVMTCAYAPSGS 110 (340)
Q Consensus 52 ~~h~~~v~~~~~s~~~~-~l~s~~~d~~i~iwd~----~~~~------~~~~~~~----------~~~~i~~v~~~~~~~ 110 (340)
..|.+.|.+++|+|+++ +|++++.||.|++||+ .+++ ....+.. |...|.+++|+|+++
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 45669999999999999 9999999999999999 8877 4444444 577899999999999
Q ss_pred EEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEEEEecCCCC---
Q psy15421 111 FVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCASFIGHTGD--- 186 (340)
Q Consensus 111 ~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~--- 186 (340)
+|++++.|+.|++|+.. + .....+.+|...+.++.|.+++ .+++++.|+.|++||+.+++....+..+...
T Consensus 122 ~l~~~~~dg~i~i~~~~-~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 196 (425)
T 1r5m_A 122 SIVTGVENGELRLWNKT-G----ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSS 196 (425)
T ss_dssp EEEEEETTSCEEEEETT-S----CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC------
T ss_pred EEEEEeCCCeEEEEeCC-C----CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccc
Confidence 99999999999999932 2 2345677899999999998765 6889999999999999999988888777766
Q ss_pred ------------eEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEe
Q psy15421 187 ------------VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFD 254 (340)
Q Consensus 187 ------------v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd 254 (340)
+.+++|+|++ .+++++.||.|++||+++++....+.+|..+|.+++|+|++.+|++++.|+.|++||
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d 275 (425)
T 1r5m_A 197 INAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWH 275 (425)
T ss_dssp ---------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred eeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 8999999975 588999999999999999988889999999999999999999999999999999999
Q ss_pred CcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCC
Q psy15421 255 IRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDS 334 (340)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~ 334 (340)
++..+.+..+. .+...+.+++|+|++ ++++++.|+.|++||..+++.+..+..|...|.+++|+|++.+|++++.||
T Consensus 276 ~~~~~~~~~~~--~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 352 (425)
T 1r5m_A 276 GGNGNSQNCFY--GHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDG 352 (425)
T ss_dssp SSSBSCSEEEC--CCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCccceEec--CCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCC
Confidence 99877666553 233469999999999 999999999999999999999999999999999999999999999999999
Q ss_pred cEEecC
Q psy15421 335 FLRIWN 340 (340)
Q Consensus 335 ~i~iW~ 340 (340)
.|++||
T Consensus 353 ~i~i~~ 358 (425)
T 1r5m_A 353 QVNVYD 358 (425)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 999996
No 46
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.8e-41 Score=292.29 Aligned_cols=250 Identities=17% Similarity=0.241 Sum_probs=211.4
Q ss_pred EEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCC--CeeEEeeCCCCcEEEEEECCC--CCEEEEEeCCCeEEEE
Q psy15421 49 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTT--NKVHAIPLRSSWVMTCAYAPS--GSFVACGGLDNICSIY 124 (340)
Q Consensus 49 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~--~~~~~~~~~~~~i~~v~~~~~--~~~l~~~~~d~~v~i~ 124 (340)
..+.+|.+.|++++|+|++++|+||+.|++|+|||+.+. +.+..+.+|...|.+++|+|+ +++|++|+.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 357899999999999999999999999999999998743 567888999999999999864 8999999999999999
Q ss_pred EccCCCCceEEEEeecCCCcceEEEEEcCC---CeEEEEeCCCeEEEEECCCCce--EEEEecCCCCeEEEEEcCC----
Q psy15421 125 SLKTREGNVRVSRELPGHTGYLSCCRFLDD---NQIVTSSGDMSCALWDIETGQQ--CASFIGHTGDVMSLSLAPD---- 195 (340)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~l~~~~~d~~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~---- 195 (340)
++.++.. .....+.+|...|.++.|.++ ..|++++.|+.|++||++.+.. ...+.+|...+.+++|+|+
T Consensus 83 d~~~~~~--~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 83 KEENGRW--SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (297)
T ss_dssp EBSSSCB--CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---
T ss_pred EcCCCce--EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccc
Confidence 9976431 223456789999999999874 4789999999999999987632 3567789999999999997
Q ss_pred ---------CCEEEEEeCCCcEEEEECCCCe----eeeEecCCCCCeEEEEEecCC---CEEEEEeCCCcEEEEeCcCCc
Q psy15421 196 ---------MRTFVSGACDASAKLWDIRDGS----CKQTFPGHESDINAVTFFPNG---WAFATGSDDATCRLFDIRADQ 259 (340)
Q Consensus 196 ---------~~~~~sg~~dg~i~~wd~~~~~----~~~~~~~h~~~v~~v~~~~~~---~~l~s~s~d~~i~iwd~~~~~ 259 (340)
+++|++|+.|++|++||++++. +...+.+|...|.+++|+|++ .+|++++.|++|++||++...
T Consensus 161 ~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~ 240 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQ 240 (297)
T ss_dssp ---------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred cccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCC
Confidence 4689999999999999998765 566789999999999999984 899999999999999987642
Q ss_pred ---EEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCC
Q psy15421 260 ---ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 300 (340)
Q Consensus 260 ---~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~ 300 (340)
....+....+...|.+++|+|++++|++|+.|++|++|+..
T Consensus 241 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 241 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp SCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 11222112334569999999999999999999999999864
No 47
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.6e-41 Score=292.13 Aligned_cols=248 Identities=23% Similarity=0.392 Sum_probs=219.2
Q ss_pred EeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Q psy15421 47 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSL 126 (340)
Q Consensus 47 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~ 126 (340)
..++|++|...|.+++|+|++++|+|++.|++|++||+.+++.+..+.+|...|.+++|+|++.++++|+.|++|++|++
T Consensus 57 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~ 136 (319)
T 3frx_A 57 PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI 136 (319)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred cceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 35679999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCceEEEEeecCCCcceEEEEEcCC-------CeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEE
Q psy15421 127 KTREGNVRVSRELPGHTGYLSCCRFLDD-------NQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTF 199 (340)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 199 (340)
... ....+.+|...+..+.+.+. ..+++++.|+.|++||+++++....+.+|...|.+++|+|+++++
T Consensus 137 ~~~-----~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l 211 (319)
T 3frx_A 137 KGQ-----CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLI 211 (319)
T ss_dssp TSC-----EEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEE
T ss_pred CCC-----eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEE
Confidence 532 34567789999999988753 268999999999999999999888899999999999999999999
Q ss_pred EEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecC------Ccccce
Q psy15421 200 VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD------NIICGI 273 (340)
Q Consensus 200 ~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~------~~~~~i 273 (340)
++|+.||+|++||+++++++..+..+ .+|.+++|+|++.++++++.+ .+++|++.....+..+... .....+
T Consensus 212 ~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v 289 (319)
T 3frx_A 212 ASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHA 289 (319)
T ss_dssp EEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCE
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcce
Confidence 99999999999999999988888754 689999999999999988754 5999999876555444221 123358
Q ss_pred EEEEEcCCCcEEEEEeCCCcEEEEeCCC
Q psy15421 274 TSVAFSRSGRLLLAGYDDFNCNVWDSMK 301 (340)
Q Consensus 274 ~~~~~s~~~~~l~~g~~d~~i~iw~~~~ 301 (340)
.+++|+|+|++|++|+.|+.|++|++.+
T Consensus 290 ~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 290 VSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred eEEEECCCCCEEEEeecCceEEEEEEee
Confidence 8999999999999999999999999755
No 48
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.7e-42 Score=312.42 Aligned_cols=277 Identities=14% Similarity=0.257 Sum_probs=235.2
Q ss_pred cEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEE
Q psy15421 57 KIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVS 136 (340)
Q Consensus 57 ~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~ 136 (340)
.+++++|+|++++|++++.|+.|++||..+.+....+..+ ..+....|+|++++|++|+.|+.|++|++..+ ...
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----~~~ 132 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN----LQR 132 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSC----EEE
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCc----cee
Confidence 3558999999999999999999999999877665555555 44555578999999999999999999998754 234
Q ss_pred EeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy15421 137 RELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD 215 (340)
Q Consensus 137 ~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~ 215 (340)
..+.+|...|.++.|++++ .|++++.|+.|++||+.+++.+..+.+|...|.+++|+|+++++++|+.||+|++||+++
T Consensus 133 ~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 212 (420)
T 3vl1_A 133 EIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGT 212 (420)
T ss_dssp EETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT
T ss_pred eecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCC
Confidence 5567899999999998765 688999999999999999999899999999999999999999999999999999999999
Q ss_pred CeeeeEecC---CCCCeEEEE---------------------EecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCccc
Q psy15421 216 GSCKQTFPG---HESDINAVT---------------------FFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIIC 271 (340)
Q Consensus 216 ~~~~~~~~~---h~~~v~~v~---------------------~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~ 271 (340)
++.+..+.. |...+.+++ |+|++.++++|+.||.|++||+++.+.+..+.. .+..
T Consensus 213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~ 291 (420)
T 3vl1_A 213 GTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPS-KFTC 291 (420)
T ss_dssp TEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECC-TTSS
T ss_pred CceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccc-ccCC
Confidence 998888864 344455555 468899999999999999999998877665532 3345
Q ss_pred ceEEEEEcCCCc-EEEEEeCCCcEEEEeCCCcee-eeeecc-CCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 272 GITSVAFSRSGR-LLLAGYDDFNCNVWDSMKTER-AGILAG-HDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 272 ~i~~~~~s~~~~-~l~~g~~d~~i~iw~~~~~~~-~~~~~~-h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
.|.+++|+|+++ +|++|+.|+.|++||..+++. +..+.+ |...|+++.+ +++.+|++++.|++|++||
T Consensus 292 ~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~ 362 (420)
T 3vl1_A 292 SCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDI 362 (420)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEE
T ss_pred CceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEe
Confidence 699999999999 999999999999999988644 666666 6778888855 5788999999999999996
No 49
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=6.3e-41 Score=300.25 Aligned_cols=289 Identities=18% Similarity=0.294 Sum_probs=238.7
Q ss_pred EeEEecCccCcEEEEEEcC-CCCeEEEEeCCCeEEEEeCCCCCeeEEee-------------CCCCcEEEEEECC-CCCE
Q psy15421 47 TRRTLRGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSYTTNKVHAIP-------------LRSSWVMTCAYAP-SGSF 111 (340)
Q Consensus 47 ~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-------------~~~~~i~~v~~~~-~~~~ 111 (340)
....+++|.+.|.+++|+| ++++|++++.||.|++||+.+++....+. .|...|.+++|+| ++.+
T Consensus 35 ~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 35 DRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp TEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred ceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 3467889999999999999 99999999999999999998876554432 4889999999999 7889
Q ss_pred EEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCC----CeEEEEeCCCeEEEEECCCCceEEEEecCCCCe
Q psy15421 112 VACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD----NQIVTSSGDMSCALWDIETGQQCASFIGHTGDV 187 (340)
Q Consensus 112 l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v 187 (340)
|++++.|+.+++|++.++. ....+ .+...+..+.+.+. ..+++++.|+.|.+||+++++....+..|...+
T Consensus 115 l~s~~~d~~i~iwd~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v 189 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTNTLQ----TADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEI 189 (408)
T ss_dssp EEEEETTSEEEEEETTTTE----EEEEE-ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCE
T ss_pred EEEEeCCCeEEEeeCCCCc----cceec-cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcE
Confidence 9999999999999997653 22222 25566777777542 268889999999999999999889999999999
Q ss_pred EEEEEcCCCC-EEEEEeCCCcEEEEECCCCe-eeeEe---------------cCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy15421 188 MSLSLAPDMR-TFVSGACDASAKLWDIRDGS-CKQTF---------------PGHESDINAVTFFPNGWAFATGSDDATC 250 (340)
Q Consensus 188 ~~~~~~~~~~-~~~sg~~dg~i~~wd~~~~~-~~~~~---------------~~h~~~v~~v~~~~~~~~l~s~s~d~~i 250 (340)
.+++|+|++. ++++|+.||.|++||++++. +...+ .+|...|.+++|+|++.++++++.|+.|
T Consensus 190 ~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 269 (408)
T 4a11_B 190 LAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRM 269 (408)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeE
Confidence 9999999998 58899999999999998765 33333 5788999999999999999999999999
Q ss_pred EEEeCcCCcEEEEeecC---CcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEE
Q psy15421 251 RLFDIRADQELAMYSHD---NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV 327 (340)
Q Consensus 251 ~iwd~~~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l 327 (340)
++||+.+.+....+... .....+........+..+++++.++.|++||..+++.+..+.+|.+.|++++|+|++.+|
T Consensus 270 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 349 (408)
T 4a11_B 270 RLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQEL 349 (408)
T ss_dssp EEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEE
T ss_pred EEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEE
Confidence 99999876654322111 111112222333445677777889999999999999999999999999999999999999
Q ss_pred EEeeCCCcEEecC
Q psy15421 328 ATGSWDSFLRIWN 340 (340)
Q Consensus 328 ~s~s~D~~i~iW~ 340 (340)
++|+.||.|++||
T Consensus 350 ~s~~~dg~i~iw~ 362 (408)
T 4a11_B 350 YSGSRDCNILAWV 362 (408)
T ss_dssp EEEETTSCEEEEE
T ss_pred EEECCCCeEEEEe
Confidence 9999999999996
No 50
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.1e-41 Score=293.24 Aligned_cols=282 Identities=18% Similarity=0.298 Sum_probs=244.9
Q ss_pred ccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCce
Q psy15421 54 HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNV 133 (340)
Q Consensus 54 h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~ 133 (340)
|.++|.+++|+|||+.++++..++.+.+|+............|...|.+++|+|+++++++++ |+.+++|++..+....
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~ 86 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKS 86 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCS
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCcee
Confidence 456899999999999999888888777776555444555557999999999999999999999 9999999997654322
Q ss_pred E-EEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCc--eEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy15421 134 R-VSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQ--QCASFIGHTGDVMSLSLAPDMRTFVSGACDASAK 209 (340)
Q Consensus 134 ~-~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~ 209 (340)
. .......|...+.++.|.+++ .+++++.|+.|++||+.+++ ....+..|...+.+++|+|+++++++++.||.|+
T Consensus 87 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~ 166 (337)
T 1gxr_A 87 PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 166 (337)
T ss_dssp CSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEE
Confidence 1 112233788999999998765 68889999999999999877 5567778999999999999999999999999999
Q ss_pred EEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEe
Q psy15421 210 LWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY 289 (340)
Q Consensus 210 ~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~ 289 (340)
+||+++++....+++|...+.+++|+|++.++++++.|+.|++||+++.+.+..+.+. ..+.+++|+|++++|++++
T Consensus 167 ~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~ 243 (337)
T 1gxr_A 167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT---SQIFSLGYCPTGEWLAVGM 243 (337)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS---SCEEEEEECTTSSEEEEEE
T ss_pred EEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCC---CceEEEEECCCCCEEEEEc
Confidence 9999999999999999999999999999999999999999999999988877766543 3589999999999999999
Q ss_pred CCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 290 DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 290 ~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
.|+.|++|+..+.+. ..+..|...|.+++|+|++++|++++.||.|++||
T Consensus 244 ~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 293 (337)
T 1gxr_A 244 ESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWR 293 (337)
T ss_dssp TTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEE
Confidence 999999999887765 45678999999999999999999999999999996
No 51
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4e-40 Score=301.00 Aligned_cols=285 Identities=19% Similarity=0.263 Sum_probs=247.7
Q ss_pred EEeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEEC--CCCCEEEEEeCCCeEEE
Q psy15421 46 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYA--PSGSFVACGGLDNICSI 123 (340)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~--~~~~~l~~~~~d~~v~i 123 (340)
+..+++.+|.+.|++++|++++ .+++|+.||+|++||+.+++.+..+..|...|.+++|+ +++.++++|+.|+.+++
T Consensus 153 ~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~v 231 (464)
T 3v7d_B 153 KFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHV 231 (464)
T ss_dssp EEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEE
T ss_pred cEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEE
Confidence 4567789999999999999988 99999999999999999999999999999999999998 57899999999999999
Q ss_pred EEccCCCCceE-------------------EEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCC
Q psy15421 124 YSLKTREGNVR-------------------VSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHT 184 (340)
Q Consensus 124 ~~~~~~~~~~~-------------------~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~ 184 (340)
|++........ ....+.+|...+.++.. .+..+++++.|+.|++||+.+++.+..+.+|.
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 310 (464)
T 3v7d_B 232 WKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG-HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT 310 (464)
T ss_dssp EECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEE-ETTEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred eeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEecCCC
Confidence 99986542211 13456778888877643 45689999999999999999999999999999
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEe
Q psy15421 185 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY 264 (340)
Q Consensus 185 ~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 264 (340)
..+.+++|+|+++.+++|+.||.|++||+++++++..+++|...|.+++|+ +.++++++.||.|++||+.+.......
T Consensus 311 ~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~ 388 (464)
T 3v7d_B 311 DRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY 388 (464)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee
Confidence 999999999999999999999999999999999999999999999999997 579999999999999999987766555
Q ss_pred ecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeee-eccCCcceEEEEECCCCCEEEEeeCCCcEEec
Q psy15421 265 SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI-LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 339 (340)
Q Consensus 265 ~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~-~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW 339 (340)
.+.. .+..++|+|+++++++|+ |+.|++||..+++.+.. +.+|...|++++|+ ++.++++++.|+.+.+|
T Consensus 389 ~~~~---~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 389 HHTN---LSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp ECTT---CCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred cCCC---CccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence 4332 367789999999999998 89999999999988875 67899999999998 44566677778877665
No 52
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.9e-41 Score=297.01 Aligned_cols=277 Identities=12% Similarity=0.118 Sum_probs=239.3
Q ss_pred EEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCC---eeEEeeCCCCcEEEEEECCCCC-EEEEEeCCCeEEEE
Q psy15421 49 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTN---KVHAIPLRSSWVMTCAYAPSGS-FVACGGLDNICSIY 124 (340)
Q Consensus 49 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~---~~~~~~~~~~~i~~v~~~~~~~-~l~~~~~d~~v~i~ 124 (340)
....+|.+.|++++|+|++++|++++.|+.|++||+.+++ .......|...|.+++|+|+++ +|++|+.|+.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 3456899999999999999999999999999999998776 3455568889999999999999 99999999999999
Q ss_pred Ec-cCCCCceEEEEeecC--CCcceEEEEEcCCCeEEEEeCCCeEEEEECCC---------CceEEEEecCCCCeEEEEE
Q psy15421 125 SL-KTREGNVRVSRELPG--HTGYLSCCRFLDDNQIVTSSGDMSCALWDIET---------GQQCASFIGHTGDVMSLSL 192 (340)
Q Consensus 125 ~~-~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~---------~~~~~~~~~~~~~v~~~~~ 192 (340)
++ ..+. ...+.+ |...+.++.|.+++.+++++.|+.|++||+++ ++.+..+. |...+.+++|
T Consensus 85 d~~~~~~-----~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~ 158 (342)
T 1yfq_A 85 DLIGSPS-----FQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDT 158 (342)
T ss_dssp CSSSSSS-----EEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEE
T ss_pred EeccCCc-----eEeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEe
Confidence 98 6543 245667 99999999998766899999999999999987 65555544 8889999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCC-Ce--eeeEecCCCCCeEEEEEec-CCCEEEEEeCCCcEEEEeCcCC------cEEE
Q psy15421 193 APDMRTFVSGACDASAKLWDIRD-GS--CKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRAD------QELA 262 (340)
Q Consensus 193 ~~~~~~~~sg~~dg~i~~wd~~~-~~--~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~------~~~~ 262 (340)
+|++ +++++.|+.|++||+++ +. .......|...+.+++|+| ++.++++++.||.|++|+++.. +...
T Consensus 159 ~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~ 236 (342)
T 1yfq_A 159 NSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRF 236 (342)
T ss_dssp CSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCE
T ss_pred cCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccce
Confidence 9987 89999999999999988 54 2334556888999999999 9999999999999999999765 4444
Q ss_pred EeecCC-------cccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccC-CcceEEEEECCCCCEEEEeeCCC
Q psy15421 263 MYSHDN-------IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH-DNRVSCLGVTEDGMAVATGSWDS 334 (340)
Q Consensus 263 ~~~~~~-------~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h-~~~i~~~~~s~d~~~l~s~s~D~ 334 (340)
.+.... +...|.+++|+|++++|++|+.||.|++||..+++.+..+.+| ...|++++ |++.+|++|+.||
T Consensus 237 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 237 AFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDD 314 (342)
T ss_dssp EEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECT
T ss_pred eeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCC
Confidence 443221 1236999999999999999999999999999999999999998 99999999 9999999999999
Q ss_pred c
Q psy15421 335 F 335 (340)
Q Consensus 335 ~ 335 (340)
+
T Consensus 315 ~ 315 (342)
T 1yfq_A 315 T 315 (342)
T ss_dssp H
T ss_pred c
Confidence 8
No 53
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.9e-40 Score=288.67 Aligned_cols=246 Identities=18% Similarity=0.377 Sum_probs=216.7
Q ss_pred CeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeE
Q psy15421 88 NKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSC 166 (340)
Q Consensus 88 ~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v 166 (340)
+....+.+|...|.+++|+|++++|++|+.|++|++|++.++. ....++.|...+.++.|++++ .+++++.|+.+
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v 121 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTN----KVHAIPLRSSWVMTCAYAPSGNYVACGGLDNIC 121 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC----EEEEEECSSSCEEEEEECTTSSEEEEEETTCEE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCC----cceEeecCCccEEEEEECCCCCEEEEEeCCCeE
Confidence 4557788999999999999999999999999999999987653 345567899999999998765 68889999999
Q ss_pred EEEECCCC----ceEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEE
Q psy15421 167 ALWDIETG----QQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 242 (340)
Q Consensus 167 ~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~ 242 (340)
++|++.++ +....+.+|.+.+.++.|+|++. +++++.|++|++||++++++...+.+|...|.+++|+|++.+++
T Consensus 122 ~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 200 (340)
T 1got_B 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV 200 (340)
T ss_dssp EEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEE
Confidence 99999865 34566788999999999998765 88999999999999999999999999999999999999999999
Q ss_pred EEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeec--cCCcceEEEEE
Q psy15421 243 TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA--GHDNRVSCLGV 320 (340)
Q Consensus 243 s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~--~h~~~i~~~~~ 320 (340)
+|+.|+.|++||+++...+..+. .+...|++++|+|++++|++|+.|++|++||..+.+.+..+. .+...|++++|
T Consensus 201 sg~~d~~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 278 (340)
T 1got_B 201 SGACDASAKLWDVREGMCRQTFT--GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSF 278 (340)
T ss_dssp EEETTSCEEEEETTTCSEEEEEC--CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred EEeCCCcEEEEECCCCeeEEEEc--CCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEE
Confidence 99999999999999887776653 233469999999999999999999999999998887766554 23457999999
Q ss_pred CCCCCEEEEeeCCCcEEecC
Q psy15421 321 TEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 321 s~d~~~l~s~s~D~~i~iW~ 340 (340)
+|+|++|++|+.|+.|++||
T Consensus 279 s~~g~~l~~g~~d~~i~vwd 298 (340)
T 1got_B 279 SKSGRLLLAGYDDFNCNVWD 298 (340)
T ss_dssp CTTSSEEEEEETTSEEEEEE
T ss_pred CCCCCEEEEECCCCeEEEEE
Confidence 99999999999999999996
No 54
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.7e-40 Score=337.11 Aligned_cols=287 Identities=23% Similarity=0.396 Sum_probs=259.6
Q ss_pred eEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEcc
Q psy15421 48 RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLK 127 (340)
Q Consensus 48 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~ 127 (340)
+..+.+|.+.|++++|+|+++++++|+.||+|++||..+++.+..+..|...|.+++|+|+++++++++.|+.|++||+.
T Consensus 608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA 687 (1249)
T ss_dssp SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCceEEEEeecCCCcceEEEEEcCC---CeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeC
Q psy15421 128 TREGNVRVSRELPGHTGYLSCCRFLDD---NQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGAC 204 (340)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~ 204 (340)
++. ....+.+|...+.++.|.++ ..+++++.|+.|++||+.+++....+.+|.+.|.+++|+|+++.+++|+.
T Consensus 688 ~~~----~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~ 763 (1249)
T 3sfz_A 688 TGK----LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSA 763 (1249)
T ss_dssp TCC----EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEES
T ss_pred CCc----eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEEC
Confidence 653 45567789999999999763 25788999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEECCCCeeeeEecC-------------CCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCccc
Q psy15421 205 DASAKLWDIRDGSCKQTFPG-------------HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIIC 271 (340)
Q Consensus 205 dg~i~~wd~~~~~~~~~~~~-------------h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~ 271 (340)
||+|++||++++.....+.. +...+.+++|+|++..+++++ ++.+.+||..+...+..+.. .+..
T Consensus 764 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~-~~~~ 841 (1249)
T 3sfz_A 764 DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHT-GHHS 841 (1249)
T ss_dssp SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEEC-SSSS
T ss_pred CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCceeEEcC-CCCC
Confidence 99999999998876655431 233688999999999999988 78999999998877665532 3345
Q ss_pred ceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 272 GITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 272 ~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
.+.+++|+|+++++++|+.|+.|++|+..++.....+.+|.+.|++++|+|+|.+|++++.|+.|++||
T Consensus 842 ~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~ 910 (1249)
T 3sfz_A 842 TIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE 910 (1249)
T ss_dssp CCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 689999999999999999999999999999999999999999999999999999999999999999996
No 55
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.2e-40 Score=324.31 Aligned_cols=287 Identities=19% Similarity=0.370 Sum_probs=255.7
Q ss_pred EEeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Q psy15421 46 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYS 125 (340)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~ 125 (340)
..+++|.+|.+.|.+++|+|++++|++++.||.|+|||..+++.+..+..|...|.+++|+|++++|++++.|+.|++|+
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 83 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCC-ceEEEEecCCCCeEEEEEcC-CCCEEEEE
Q psy15421 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETG-QQCASFIGHTGDVMSLSLAP-DMRTFVSG 202 (340)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~~~sg 202 (340)
+.++. ....+.+|...+.++.|++++ .+++++.|+.|++||+.++ .....+.+|...+.+++|+| ++..++++
T Consensus 84 ~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~ 159 (814)
T 3mkq_A 84 YNTGE----KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (814)
T ss_dssp TTTCC----EEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEE
T ss_pred CCCCc----EEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEE
Confidence 97653 345567899999999998775 6889999999999999987 56677888999999999999 88899999
Q ss_pred eCCCcEEEEECCCCeeeeEecCCC-CCeEEEEEec--CCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEc
Q psy15421 203 ACDASAKLWDIRDGSCKQTFPGHE-SDINAVTFFP--NGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS 279 (340)
Q Consensus 203 ~~dg~i~~wd~~~~~~~~~~~~h~-~~v~~v~~~~--~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s 279 (340)
+.||.|++||++++.....+..+. ..+.+++|+| ++.++++++.||.|++||+.+++.+..+.. +...|.+++|+
T Consensus 160 ~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~--~~~~v~~~~~~ 237 (814)
T 3mkq_A 160 CLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG--HMSNVSFAVFH 237 (814)
T ss_dssp ETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEEC--CSSCEEEEEEC
T ss_pred eCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcC--CCCCEEEEEEc
Confidence 999999999999887777666554 8899999999 999999999999999999998877766542 23469999999
Q ss_pred CCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCC--EEEEeeCCCcEEec
Q psy15421 280 RSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM--AVATGSWDSFLRIW 339 (340)
Q Consensus 280 ~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~--~l~s~s~D~~i~iW 339 (340)
|++++|++|+.||.|++|+..+++....+..|...|.+++|+|+|. ++++++ |+.+.+|
T Consensus 238 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~ 298 (814)
T 3mkq_A 238 PTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGF-DNGFTVL 298 (814)
T ss_dssp SSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEE-TTEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEe-CCCEEEE
Confidence 9999999999999999999999999999999999999999999997 456555 5556666
No 56
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5.9e-40 Score=299.85 Aligned_cols=279 Identities=20% Similarity=0.360 Sum_probs=242.6
Q ss_pred EeEEecCccCcE-EEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Q psy15421 47 TRRTLRGHLAKI-YAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYS 125 (340)
Q Consensus 47 ~~~~~~~h~~~v-~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~ 125 (340)
...++++|.+.| .++.+ ++++|++|+.||+|++||+.+++.+..+.+|...|.+++|+|++ ++++|+.|++|++|+
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd 189 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWD 189 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEE
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEE
Confidence 456889999885 66665 56799999999999999999999999999999999999999988 999999999999999
Q ss_pred ccCCCCceEEEEeecCCCcceEEEEEc--CC-CeEEEEeCCCeEEEEECCCCce-----------------------EEE
Q psy15421 126 LKTREGNVRVSRELPGHTGYLSCCRFL--DD-NQIVTSSGDMSCALWDIETGQQ-----------------------CAS 179 (340)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~~l~~~~~d~~v~iwd~~~~~~-----------------------~~~ 179 (340)
+.++. ....+.+|...+.++.+. ++ ..+++++.|+.|++||+++++. ...
T Consensus 190 ~~~~~----~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (464)
T 3v7d_B 190 IKKGC----CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV 265 (464)
T ss_dssp TTTTE----EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEE
T ss_pred CCCCc----EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEE
Confidence 97653 455677899999998886 33 4689999999999999987652 445
Q ss_pred EecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCc
Q psy15421 180 FIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 259 (340)
Q Consensus 180 ~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 259 (340)
+.+|...+.++ +++++++++|+.||.|++||+++++++..+.+|...|.+++|+|++.++++|+.|+.|++||+++++
T Consensus 266 ~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 266 LRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE 343 (464)
T ss_dssp ECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred ccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 66788888777 5778899999999999999999999999999999999999999999999999999999999999888
Q ss_pred EEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEec
Q psy15421 260 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 339 (340)
Q Consensus 260 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW 339 (340)
.+..+. .+...|.++.|+ +++|++|+.|+.|++||..+.+..... .|...+..++|+|++.+|++|+ |+.|++|
T Consensus 344 ~~~~~~--~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-dg~i~iw 417 (464)
T 3v7d_B 344 LMYTLQ--GHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY-HHTNLSAITTFYVSDNILVSGS-ENQFNIY 417 (464)
T ss_dssp EEEEEC--CCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE-ECTTCCCEEEEEECSSEEEEEE-TTEEEEE
T ss_pred EEEEEe--CCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee-cCCCCccEEEEEeCCCEEEEec-CCeEEEE
Confidence 777664 233468999997 589999999999999999887665544 4777888899999999999999 9999999
Q ss_pred C
Q psy15421 340 N 340 (340)
Q Consensus 340 ~ 340 (340)
|
T Consensus 418 d 418 (464)
T 3v7d_B 418 N 418 (464)
T ss_dssp E
T ss_pred E
Confidence 6
No 57
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=9.3e-40 Score=297.15 Aligned_cols=280 Identities=25% Similarity=0.431 Sum_probs=250.4
Q ss_pred EEeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Q psy15421 46 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYS 125 (340)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~ 125 (340)
+..+++.+|.+.|++++|+ ++.+++|+.||+|++||+.+++.+..+..|...|.++.++ +.++++|+.|+.+++|+
T Consensus 150 ~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd 225 (445)
T 2ovr_B 150 KCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWD 225 (445)
T ss_dssp CEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEE
T ss_pred cEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEE
Confidence 4557889999999999997 5699999999999999999999999999999999999885 67899999999999999
Q ss_pred ccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCC
Q psy15421 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACD 205 (340)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~d 205 (340)
+.++. ....+.+|...+.++.+ ++..+++++.|+.|++||+++++.+..+.+|...+.++++ ++..+++|+.|
T Consensus 226 ~~~~~----~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d 298 (445)
T 2ovr_B 226 IETGQ----CLHVLMGHVAAVRCVQY-DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLD 298 (445)
T ss_dssp SSSCC----EEEEEECCSSCEEEEEE-CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETT
T ss_pred CCCCc----EEEEEcCCcccEEEEEE-CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCC
Confidence 97653 34566789999999988 6678999999999999999999999999999999999999 78899999999
Q ss_pred CcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeec-CCcccceEEEEEcCCCcE
Q psy15421 206 ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSH-DNIICGITSVAFSRSGRL 284 (340)
Q Consensus 206 g~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~ 284 (340)
|.|++||+++++++..+.+|...+.++.++ +.++++|+.||.|++||+++++.+..+.. ..+...|.+++|+ +++
T Consensus 299 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~ 374 (445)
T 2ovr_B 299 TSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNF 374 (445)
T ss_dssp SCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSE
T ss_pred CeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCE
Confidence 999999999999999999999999888775 56999999999999999998887776643 2345579999996 589
Q ss_pred EEEEeCCCcEEEEeCCCceeeeee-----ccCCcceEEEEECCCCCEEEEeeCCCc----EEecC
Q psy15421 285 LLAGYDDFNCNVWDSMKTERAGIL-----AGHDNRVSCLGVTEDGMAVATGSWDSF----LRIWN 340 (340)
Q Consensus 285 l~~g~~d~~i~iw~~~~~~~~~~~-----~~h~~~i~~~~~s~d~~~l~s~s~D~~----i~iW~ 340 (340)
|++|+.||.|++||..+++.+..+ .+|.+.|++++|+|++.+|++|+.||+ |.|||
T Consensus 375 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~d 439 (445)
T 2ovr_B 375 VITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 439 (445)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEE
T ss_pred EEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEE
Confidence 999999999999999999888777 578899999999999999999999998 99986
No 58
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=301.38 Aligned_cols=283 Identities=13% Similarity=0.230 Sum_probs=227.3
Q ss_pred ccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCC-----------eeEEeeCCC------------CcEEEEEECCCC-
Q psy15421 54 HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTN-----------KVHAIPLRS------------SWVMTCAYAPSG- 109 (340)
Q Consensus 54 h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~-----------~~~~~~~~~------------~~i~~v~~~~~~- 109 (340)
|.+.|.+++|+|++++|++|+.||.|+|||+.+++ ....+..|. ..|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 67899999999999999999999999999998776 467788898 889999999998
Q ss_pred -CEEEEEeCCCeEEEEEccCCCCce-----------------------------------EEE-EeecCCCcceEEEEEc
Q psy15421 110 -SFVACGGLDNICSIYSLKTREGNV-----------------------------------RVS-RELPGHTGYLSCCRFL 152 (340)
Q Consensus 110 -~~l~~~~~d~~v~i~~~~~~~~~~-----------------------------------~~~-~~~~~~~~~v~~~~~~ 152 (340)
.+|++++.|+.|++|++..+.... ... ....+|...|.++.|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 899999999999999987532100 000 1135799999999998
Q ss_pred CCC-eEEEEeCCCeEEEEECCCCc-eEEE-------EecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCee----
Q psy15421 153 DDN-QIVTSSGDMSCALWDIETGQ-QCAS-------FIGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSC---- 218 (340)
Q Consensus 153 ~~~-~l~~~~~d~~v~iwd~~~~~-~~~~-------~~~~~~~v~~~~~~~~~-~~~~sg~~dg~i~~wd~~~~~~---- 218 (340)
+++ .++++ .|+.|++||++... .... +.+|...|.+++|+|++ +++++|+.||.|++||+++++.
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 265 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRH 265 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTT
T ss_pred CCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccce
Confidence 776 46666 89999999998443 3332 45799999999999998 8999999999999999999886
Q ss_pred eeEecCCCC------------CeEEEEEecCCCEEEEEeCCCcEEEEeCcC-CcEEEEeecCCcc-------------cc
Q psy15421 219 KQTFPGHES------------DINAVTFFPNGWAFATGSDDATCRLFDIRA-DQELAMYSHDNII-------------CG 272 (340)
Q Consensus 219 ~~~~~~h~~------------~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~-~~~~~~~~~~~~~-------------~~ 272 (340)
...+.+|.. .|.+++|+|++.+|++++. +.|++||++. .+.+..+...... ..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~ 344 (447)
T 3dw8_B 266 SKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFD 344 (447)
T ss_dssp CEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGC
T ss_pred eeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccccc
Confidence 678888876 8999999999999999998 9999999986 6555544322110 11
Q ss_pred eEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeee--------------------------------ccCCcceEEEEE
Q psy15421 273 ITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL--------------------------------AGHDNRVSCLGV 320 (340)
Q Consensus 273 i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~--------------------------------~~h~~~i~~~~~ 320 (340)
+..++|+|++++|++|+.|+.|++||..+++.+... ..+...|..++|
T Consensus 345 ~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 424 (447)
T 3dw8_B 345 KFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAW 424 (447)
T ss_dssp CCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEE
T ss_pred ceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEE
Confidence 344899999999999999999999999887654311 123457899999
Q ss_pred CCCCCEEEEeeCCCcEEec
Q psy15421 321 TEDGMAVATGSWDSFLRIW 339 (340)
Q Consensus 321 s~d~~~l~s~s~D~~i~iW 339 (340)
+|++.+||+++.|+ +++|
T Consensus 425 ~p~~~~la~~~~~~-~~~~ 442 (447)
T 3dw8_B 425 HPKENIIAVATTNN-LYIF 442 (447)
T ss_dssp CSSSSEEEEECSSC-EEEE
T ss_pred CCCCCEEEEEecce-eeee
Confidence 99999999999886 5555
No 59
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.2e-40 Score=312.31 Aligned_cols=288 Identities=13% Similarity=0.176 Sum_probs=240.1
Q ss_pred eEEeEEecCccC---cEEEEEEcCC-CCeEEEEeCCCeEEEEeCCCCCeeEEe-e---CCCCcEEEEEECCCCCEEEEEe
Q psy15421 45 MRTRRTLRGHLA---KIYAMHWGSD-SRNLVSASQDGKLIVWDSYTTNKVHAI-P---LRSSWVMTCAYAPSGSFVACGG 116 (340)
Q Consensus 45 ~~~~~~~~~h~~---~v~~~~~s~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~-~---~~~~~i~~v~~~~~~~~l~~~~ 116 (340)
.+....+.+|.. .|.+++|+|+ +++|++++.|+.|++||+.+++.+..+ . .|...|.++.|+ ++.++++++
T Consensus 193 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~ 271 (615)
T 1pgu_A 193 FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVG 271 (615)
T ss_dssp BEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEE
T ss_pred cceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEc
Confidence 355678899999 9999999999 999999999999999999999988888 6 899999999999 999999999
Q ss_pred CCCeEEEEEccCCCCceEEEEeecCC----CcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEE
Q psy15421 117 LDNICSIYSLKTREGNVRVSRELPGH----TGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSL 192 (340)
Q Consensus 117 ~d~~v~i~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~ 192 (340)
.|+.+++|++.++. ....+..+ ...+..+.+.+++.+++++.|+.|++||+.+++.+..+.+|...|.+++|
T Consensus 272 ~d~~i~~wd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~ 347 (615)
T 1pgu_A 272 ADATIRVWDVTTSK----CVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV 347 (615)
T ss_dssp TTSEEEEEETTTTE----EEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET
T ss_pred CCCcEEEEECCCCc----EEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe
Confidence 99999999997653 22333333 45666777776778999999999999999988777777666666655555
Q ss_pred cCC-----------------------------------------------------------------------------
Q psy15421 193 APD----------------------------------------------------------------------------- 195 (340)
Q Consensus 193 ~~~----------------------------------------------------------------------------- 195 (340)
|+
T Consensus 348 -~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 426 (615)
T 1pgu_A 348 -NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTND 426 (615)
T ss_dssp -TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETT
T ss_pred -cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCC
Confidence 33
Q ss_pred -----------------------------CCEEEEEeC-CCcEEEEECCCCeee-eEecCCCCCeEEEEEecCCCEEEEE
Q psy15421 196 -----------------------------MRTFVSGAC-DASAKLWDIRDGSCK-QTFPGHESDINAVTFFPNGWAFATG 244 (340)
Q Consensus 196 -----------------------------~~~~~sg~~-dg~i~~wd~~~~~~~-~~~~~h~~~v~~v~~~~~~~~l~s~ 244 (340)
++++++++. ||.|++||+.++... ..+.+|...|.+++|+|++++|+++
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 506 (615)
T 1pgu_A 427 DDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAG 506 (615)
T ss_dssp SEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEE
T ss_pred CceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEc
Confidence 334444555 666666666554443 5567799999999999999999999
Q ss_pred eCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcC----------CCcEEEEEeCCCcEEEEeCCCc-eeeeeeccCCc
Q psy15421 245 SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR----------SGRLLLAGYDDFNCNVWDSMKT-ERAGILAGHDN 313 (340)
Q Consensus 245 s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~----------~~~~l~~g~~d~~i~iw~~~~~-~~~~~~~~h~~ 313 (340)
+.|+.|++||+.+.+.+..+.. .+...|++++|+| ++++|++|+.|+.|++|+..+. +.+..+.+|..
T Consensus 507 ~~dg~i~iw~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~ 585 (615)
T 1pgu_A 507 DVMGKILLYDLQSREVKTSRWA-FRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKD 585 (615)
T ss_dssp ETTSCEEEEETTTTEEEECCSC-CCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTT
T ss_pred CCCCeEEEeeCCCCcceeEeec-CCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCcc
Confidence 9999999999998877765431 1345699999999 9999999999999999999887 77888999999
Q ss_pred ceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 314 RVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 314 ~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
.|++++|+|++. |++++.|++|++||
T Consensus 586 ~v~~l~~s~~~~-l~s~~~d~~v~iw~ 611 (615)
T 1pgu_A 586 GVNNLLWETPST-LVSSGADACIKRWN 611 (615)
T ss_dssp CEEEEEEEETTE-EEEEETTSCEEEEE
T ss_pred ceEEEEEcCCCC-eEEecCCceEEEEe
Confidence 999999999999 99999999999996
No 60
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.2e-40 Score=300.52 Aligned_cols=271 Identities=24% Similarity=0.404 Sum_probs=240.9
Q ss_pred ecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCC
Q psy15421 51 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTRE 130 (340)
Q Consensus 51 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~ 130 (340)
..+|...|+++++ +++++++|+.||+|++||..+++.+..+..|...|.++.| ++.++++|+.|+.|++|++.++.
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~ 204 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE 204 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc
Confidence 3467788999886 7889999999999999999999999999999999999988 78999999999999999997653
Q ss_pred CceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceE---EEEecCCCCeEEEEEcCCCCEEEEEeCCCc
Q psy15421 131 GNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQC---ASFIGHTGDVMSLSLAPDMRTFVSGACDAS 207 (340)
Q Consensus 131 ~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~ 207 (340)
....+.+|...+.++.|. ++.+++++.|+.|++||+.+++.. ..+.+|...+.++++ +++++++|+.||.
T Consensus 205 ----~~~~~~~h~~~v~~l~~~-~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~ 277 (435)
T 1p22_A 205 ----MLNTLIHHCEAVLHLRFN-NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRT 277 (435)
T ss_dssp ----EEEEECCCCSCEEEEECC-TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSE
T ss_pred ----EEEEEcCCCCcEEEEEEc-CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCe
Confidence 445677899999999885 568999999999999999887654 567789999999999 6789999999999
Q ss_pred EEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEE
Q psy15421 208 AKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLA 287 (340)
Q Consensus 208 i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 287 (340)
|++||+++++++..+.+|...|.++.++ +.++++|+.||.|++||+++++.+..+. .+...|.+++| ++.+|++
T Consensus 278 i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~~~~--~~~~l~s 351 (435)
T 1p22_A 278 IKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLE--GHEELVRCIRF--DNKRIVS 351 (435)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEEC--CCSSCEEEEEC--CSSEEEE
T ss_pred EEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEe--CCcCcEEEEEe--cCCEEEE
Confidence 9999999999999999999999999985 6799999999999999999888777664 23346888888 7899999
Q ss_pred EeCCCcEEEEeCCCce---------eeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 288 GYDDFNCNVWDSMKTE---------RAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 288 g~~d~~i~iw~~~~~~---------~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
|+.||.|++||..+.. .+..+.+|.+.|++++| ++.+|++|+.||+|++||
T Consensus 352 g~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd 411 (435)
T 1p22_A 352 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 411 (435)
T ss_dssp EETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC
T ss_pred EeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEE
Confidence 9999999999986655 67888999999999999 788999999999999997
No 61
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-40 Score=288.75 Aligned_cols=252 Identities=19% Similarity=0.281 Sum_probs=202.4
Q ss_pred eEEe-cC-ccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCC-------CCeeEEeeCCCCcEEEEEECCCCCEEEEEeCC
Q psy15421 48 RRTL-RG-HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYT-------TNKVHAIPLRSSWVMTCAYAPSGSFVACGGLD 118 (340)
Q Consensus 48 ~~~~-~~-h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~-------~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d 118 (340)
...+ .+ |.+.|.+++|+|++++|++++.|++|+|||... .+.+..+.+|...|.+++|+|++++|++|+.|
T Consensus 49 ~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D 128 (330)
T 2hes_X 49 IDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD 128 (330)
T ss_dssp EEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETT
T ss_pred EEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCC
Confidence 3455 45 999999999999999999999999999999853 33456778999999999999999999999999
Q ss_pred CeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCC--ceEEEEecCCCCeEEEEEcCC
Q psy15421 119 NICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETG--QQCASFIGHTGDVMSLSLAPD 195 (340)
Q Consensus 119 ~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~ 195 (340)
++|++|++............+.+|...|.++.|++++ .|++++.|++|++||+..+ +.+..+.+|.+.|.+++|+|+
T Consensus 129 ~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 208 (330)
T 2hes_X 129 KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKT 208 (330)
T ss_dssp SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCS
T ss_pred CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCC
Confidence 9999999964433344556778999999999998764 6889999999999999776 567788899999999999998
Q ss_pred --CCEEEEEeCCCcEEEEECCCC--------eeeeEecC-CCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCc--EEE
Q psy15421 196 --MRTFVSGACDASAKLWDIRDG--------SCKQTFPG-HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ--ELA 262 (340)
Q Consensus 196 --~~~~~sg~~dg~i~~wd~~~~--------~~~~~~~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~--~~~ 262 (340)
+..+++|+.|++|++||++.+ .+...+.+ |...|.+++|++++ +|++++.||.|++||...++ ...
T Consensus 209 ~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~ 287 (330)
T 2hes_X 209 EGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFA 287 (330)
T ss_dssp SSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEE
T ss_pred CCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEe
Confidence 678999999999999998654 34455555 89999999999765 89999999999999987653 222
Q ss_pred EeecCCccc-ceEEEEEcC--CCcEEEEEeCCCcEEEEeCCC
Q psy15421 263 MYSHDNIIC-GITSVAFSR--SGRLLLAGYDDFNCNVWDSMK 301 (340)
Q Consensus 263 ~~~~~~~~~-~i~~~~~s~--~~~~l~~g~~d~~i~iw~~~~ 301 (340)
... ..+.. .|.+++|+| ++++|++|+.|++|++|+..+
T Consensus 288 ~~~-~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 288 KRA-LCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EES-CTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred ccc-cccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 221 22222 699999999 789999999999999999753
No 62
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3e-40 Score=284.60 Aligned_cols=246 Identities=16% Similarity=0.270 Sum_probs=206.9
Q ss_pred EEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcC---CCeEEEEeCCCeEE
Q psy15421 91 HAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD---DNQIVTSSGDMSCA 167 (340)
Q Consensus 91 ~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~l~~~~~d~~v~ 167 (340)
..+.+|...|.+++|+|+|++|++|+.|++|++|++..... .....+.+|...|.++.|.+ +..|++++.|++|+
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~--~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~ 80 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH--KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVM 80 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB--CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc--EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEE
Confidence 34668999999999999999999999999999999864322 23466789999999999964 45789999999999
Q ss_pred EEECCCCc--eEEEEecCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCe--eeeEecCCCCCeEEEEEecC----
Q psy15421 168 LWDIETGQ--QCASFIGHTGDVMSLSLAPD--MRTFVSGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFPN---- 237 (340)
Q Consensus 168 iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~sg~~dg~i~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~---- 237 (340)
+||+++++ .+..+.+|...|.+++|+|+ +.++++|+.|++|++||++++. ....+.+|...|++++|+|+
T Consensus 81 iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (297)
T ss_dssp EEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---
T ss_pred EEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccc
Confidence 99998874 45667789999999999997 7899999999999999998763 24567889999999999997
Q ss_pred ---------CCEEEEEeCCCcEEEEeCcCCc----EEEEeecCCcccceEEEEEcCCC---cEEEEEeCCCcEEEEeCCC
Q psy15421 238 ---------GWAFATGSDDATCRLFDIRADQ----ELAMYSHDNIICGITSVAFSRSG---RLLLAGYDDFNCNVWDSMK 301 (340)
Q Consensus 238 ---------~~~l~s~s~d~~i~iwd~~~~~----~~~~~~~~~~~~~i~~~~~s~~~---~~l~~g~~d~~i~iw~~~~ 301 (340)
+++|++|+.|+.|++||++..+ ....+ ..+...|.+++|+|++ .+|++|+.|++|++|+..+
T Consensus 161 ~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l--~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL--EGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp ---------CCEEEEEETTSCEEEEEEETTTTEEEEEEEE--CCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEe--cCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 5699999999999999998654 22222 3344569999999995 8999999999999999765
Q ss_pred ce---eeeee--ccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 302 TE---RAGIL--AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 302 ~~---~~~~~--~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
.. ....+ .+|...|++++|+|+|++|++++.|++|+||+
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~ 282 (297)
T 2pm7_B 239 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 282 (297)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEE
T ss_pred CCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 32 12223 57889999999999999999999999999995
No 63
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.2e-41 Score=295.91 Aligned_cols=248 Identities=18% Similarity=0.205 Sum_probs=196.9
Q ss_pred eEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCC--eeEEeeCCCCcEEEEEECC--CCCEEEEEeCCCeEEE
Q psy15421 48 RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTN--KVHAIPLRSSWVMTCAYAP--SGSFVACGGLDNICSI 123 (340)
Q Consensus 48 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~i~~v~~~~--~~~~l~~~~~d~~v~i 123 (340)
+..+.+|.+.|++++|+|++++|+||+.|++|+|||+.+++ .+..+.+|...|.+++|+| ++++|++|+.|++|++
T Consensus 6 ~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp --------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred eeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 34678999999999999999999999999999999998764 3567788888899998875 3788888888888888
Q ss_pred EEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCC--CCEEEE
Q psy15421 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPD--MRTFVS 201 (340)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~s 201 (340)
|++.++. .+....+.+|...|.+++|+|+ +.++++
T Consensus 86 Wd~~~~~-------------------------------------------~~~~~~~~~h~~~V~~v~~~p~~~g~~las 122 (316)
T 3bg1_A 86 WREENGT-------------------------------------------WEKSHEHAGHDSSVNSVCWAPHDYGLILAC 122 (316)
T ss_dssp ECCSSSC-------------------------------------------CCEEEEECCCSSCCCEEEECCTTTCSCEEE
T ss_pred EECCCCc-------------------------------------------ceEEEEccCCCCceEEEEECCCCCCcEEEE
Confidence 8764321 0122334568888999999998 789999
Q ss_pred EeCCCcEEEEECCCCe---eeeEecCCCCCeEEEEEecC-----------------CCEEEEEeCCCcEEEEeCcCCc--
Q psy15421 202 GACDASAKLWDIRDGS---CKQTFPGHESDINAVTFFPN-----------------GWAFATGSDDATCRLFDIRADQ-- 259 (340)
Q Consensus 202 g~~dg~i~~wd~~~~~---~~~~~~~h~~~v~~v~~~~~-----------------~~~l~s~s~d~~i~iwd~~~~~-- 259 (340)
|+.|++|++||++.+. ....+.+|...|.+++|+|+ +.+|++|+.|+.|++||++...
T Consensus 123 gs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~ 202 (316)
T 3bg1_A 123 GSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQW 202 (316)
T ss_dssp ECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCE
T ss_pred EcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCcc
Confidence 9999999999998753 23556789999999999997 4689999999999999997542
Q ss_pred -EEEEeecCCcccceEEEEEcCCC----cEEEEEeCCCcEEEEeCCCc---e-eeeeeccCCcceEEEEECCCCCEEEEe
Q psy15421 260 -ELAMYSHDNIICGITSVAFSRSG----RLLLAGYDDFNCNVWDSMKT---E-RAGILAGHDNRVSCLGVTEDGMAVATG 330 (340)
Q Consensus 260 -~~~~~~~~~~~~~i~~~~~s~~~----~~l~~g~~d~~i~iw~~~~~---~-~~~~~~~h~~~i~~~~~s~d~~~l~s~ 330 (340)
.+..+ ..+...|.+++|+|++ ++|++|+.|++|++|+..+. + ....+.+|.+.|++++|+|+|.+|++|
T Consensus 203 ~~~~~l--~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~ 280 (316)
T 3bg1_A 203 KEEQKL--EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVS 280 (316)
T ss_dssp EEEECC--BCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEE
T ss_pred ceeeec--ccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEE
Confidence 23222 3344569999999987 89999999999999997652 1 234567899999999999999999999
Q ss_pred eCCCcEEecC
Q psy15421 331 SWDSFLRIWN 340 (340)
Q Consensus 331 s~D~~i~iW~ 340 (340)
+.|++|+||+
T Consensus 281 ~~D~~v~lw~ 290 (316)
T 3bg1_A 281 GGDNKVTLWK 290 (316)
T ss_dssp ESSSCEEEEE
T ss_pred cCCCeEEEEE
Confidence 9999999995
No 64
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.3e-40 Score=291.31 Aligned_cols=291 Identities=16% Similarity=0.221 Sum_probs=223.8
Q ss_pred eEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCC----eeEEeeCCCCcEEEEEECC--CCCEEEEEeCCCeE
Q psy15421 48 RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTN----KVHAIPLRSSWVMTCAYAP--SGSFVACGGLDNIC 121 (340)
Q Consensus 48 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~----~~~~~~~~~~~i~~v~~~~--~~~~l~~~~~d~~v 121 (340)
++.++||.+.|++++|+|++++|++++.||.|++||+.++. ....+..|...|.+++|+| ++.+|++++.|+.|
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 45678999999999999999999999999999999998763 4566788999999999999 69999999999999
Q ss_pred EEEEccCCCCc-----eEEEEeecCCCcceEEEEEcCC--C-eEEEEeCCCeEEEEECCCCceEEEEe------------
Q psy15421 122 SIYSLKTREGN-----VRVSRELPGHTGYLSCCRFLDD--N-QIVTSSGDMSCALWDIETGQQCASFI------------ 181 (340)
Q Consensus 122 ~i~~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~--~-~l~~~~~d~~v~iwd~~~~~~~~~~~------------ 181 (340)
++|++..+... ......+..|...+.++.|.++ + .+++++.|+.|++||+++++.+..+.
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccccc
Confidence 99999875422 2445667789999999999875 4 68899999999999998876543322
Q ss_pred -cCCCCeEEEEEcCC---CCEEEEEeCCCcEEEEECCCCee--eeEecCCCCCeEEEEEecCC----CEEEEEeCCCcEE
Q psy15421 182 -GHTGDVMSLSLAPD---MRTFVSGACDASAKLWDIRDGSC--KQTFPGHESDINAVTFFPNG----WAFATGSDDATCR 251 (340)
Q Consensus 182 -~~~~~v~~~~~~~~---~~~~~sg~~dg~i~~wd~~~~~~--~~~~~~h~~~v~~v~~~~~~----~~l~s~s~d~~i~ 251 (340)
.|...+.+++|+|+ +..+++++.|+.+.+|+...+.. ...+.+|..+|.+++|+|++ .+|++|+.||.|+
T Consensus 164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~ 243 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIR 243 (351)
T ss_dssp SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEE
T ss_pred CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEE
Confidence 57788999999997 89999999999999998887764 66788999999999999998 8999999999999
Q ss_pred EEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEE----eCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEE
Q psy15421 252 LFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAG----YDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV 327 (340)
Q Consensus 252 iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g----~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l 327 (340)
+||++......... ..........+++....++.+ .....+.+|+....+.+..+.+|...|++++|+|++++|
T Consensus 244 iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 321 (351)
T 3f3f_A 244 IFKITEKLSPLASE--ESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTIL 321 (351)
T ss_dssp EEEEEECC-----------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCE
T ss_pred EEeCCCCcCccccC--CcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEE
Confidence 99998654332221 111123333444444444443 334456667766777888899999999999999999999
Q ss_pred EEeeCCCcEEecC
Q psy15421 328 ATGSWDSFLRIWN 340 (340)
Q Consensus 328 ~s~s~D~~i~iW~ 340 (340)
++|+.||.|+|||
T Consensus 322 ~s~~~dg~v~iw~ 334 (351)
T 3f3f_A 322 SSAGDDGKVRLWK 334 (351)
T ss_dssp EEEETTSCEEEEE
T ss_pred EEecCCCcEEEEe
Confidence 9999999999996
No 65
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=290.40 Aligned_cols=251 Identities=20% Similarity=0.311 Sum_probs=210.9
Q ss_pred eeEEeeCCCC-cEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeE
Q psy15421 89 KVHAIPLRSS-WVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSC 166 (340)
Q Consensus 89 ~~~~~~~~~~-~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v 166 (340)
.+..+++|.. .|..++|+|++++|++|+.|++|++|++..+... .......+|...|.++.|++++ .|++++.|+++
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~-~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v 85 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWI-CKSVLSEGHQRTVRKVAWSPCGNYLASASFDATT 85 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEE-EEEEECSSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcce-eeeeeccccCCcEEEEEECCCCCEEEEEECCCcE
Confidence 4567788877 8999999999999999999999999998754211 1122346899999999998765 68899999999
Q ss_pred EEEECCCCc--eEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe---eeeEecCCCCCeEEEEEecCCCEE
Q psy15421 167 ALWDIETGQ--QCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS---CKQTFPGHESDINAVTFFPNGWAF 241 (340)
Q Consensus 167 ~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~---~~~~~~~h~~~v~~v~~~~~~~~l 241 (340)
++||+..+. .+..+.+|...|.+++|+|++++|++|+.|++|++||++++. ++..+.+|...|.+++|+|++.+|
T Consensus 86 ~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 165 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELL 165 (345)
T ss_dssp EEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCE
T ss_pred EEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEE
Confidence 999998764 567788999999999999999999999999999999998763 456788999999999999999999
Q ss_pred EEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCc---------------eeee
Q psy15421 242 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT---------------ERAG 306 (340)
Q Consensus 242 ~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~---------------~~~~ 306 (340)
++|+.|+.|++||.+..+.........+...|++++|+|++++|++|+.|++|++|+.... +++.
T Consensus 166 ~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~ 245 (345)
T 3fm0_A 166 ASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCIC 245 (345)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEE
T ss_pred EEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeE
Confidence 9999999999999987654332223344557999999999999999999999999985321 2333
Q ss_pred eecc-CCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 307 ILAG-HDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 307 ~~~~-h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
.+.+ |...|++++|+|++..|++++.|+.|++|+
T Consensus 246 ~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~ 280 (345)
T 3fm0_A 246 TLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQ 280 (345)
T ss_dssp EECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred EecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence 4444 889999999999999999999999999995
No 66
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.2e-40 Score=300.29 Aligned_cols=283 Identities=18% Similarity=0.215 Sum_probs=234.4
Q ss_pred ecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCC
Q psy15421 51 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTRE 130 (340)
Q Consensus 51 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~ 130 (340)
+.+| ..+....|++++++|++++.||.|++||+.+++....+..|...|.+++|+|++++|++++.|+.|++|++.++.
T Consensus 94 ~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 172 (420)
T 3vl1_A 94 LKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS 172 (420)
T ss_dssp SCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 3444 445555789999999999999999999999888888888999999999999999999999999999999998654
Q ss_pred CceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEEEEec---CCCCeE------------------
Q psy15421 131 GNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCASFIG---HTGDVM------------------ 188 (340)
Q Consensus 131 ~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~---~~~~v~------------------ 188 (340)
....+.+|...|.++.|++++ .+++++.|+.|++||+++++....+.. +...+.
T Consensus 173 ----~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 248 (420)
T 3vl1_A 173 ----NPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTS 248 (420)
T ss_dssp ----CCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCC
T ss_pred ----CceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccC
Confidence 234567899999999998764 688999999999999999988888764 333444
Q ss_pred ---EEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEec-CCCCCeEEEEEecCCC-EEEEEeCCCcEEEEeCcCCcE-EE
Q psy15421 189 ---SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP-GHESDINAVTFFPNGW-AFATGSDDATCRLFDIRADQE-LA 262 (340)
Q Consensus 189 ---~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~-~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~~~-~~ 262 (340)
+++|+|+++++++|+.||.|++||+++++....+. +|...|.+++|+|++. ++++|+.||.|++||+++.+. +.
T Consensus 249 ~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~ 328 (420)
T 3vl1_A 249 KKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVG 328 (420)
T ss_dssp CCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSE
T ss_pred cccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchh
Confidence 45557899999999999999999999988766654 5888999999999998 999999999999999987643 34
Q ss_pred EeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCc---------eeeeeeccCCcceEEEEECCCCC---EEEEe
Q psy15421 263 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT---------ERAGILAGHDNRVSCLGVTEDGM---AVATG 330 (340)
Q Consensus 263 ~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~---------~~~~~~~~h~~~i~~~~~s~d~~---~l~s~ 330 (340)
.+.. .+...+.++.+ |++++|++|+.|+.|++|+.... .....+.+|.+.|.+++|+|++. .|+++
T Consensus 329 ~~~~-~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~ 406 (420)
T 3vl1_A 329 EFLI-NEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEV 406 (420)
T ss_dssp EEEE-STTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEE
T ss_pred hhhc-cCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEE
Confidence 3332 12235777754 57899999999999999997653 22334668899999999999999 78888
Q ss_pred eCCCcEEecC
Q psy15421 331 SWDSFLRIWN 340 (340)
Q Consensus 331 s~D~~i~iW~ 340 (340)
+.+|.+++|+
T Consensus 407 g~~g~~~~~~ 416 (420)
T 3vl1_A 407 GKNNFCALYN 416 (420)
T ss_dssp ETTTEEEEEE
T ss_pred cCCceEEEEe
Confidence 8899999995
No 67
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-40 Score=322.59 Aligned_cols=165 Identities=13% Similarity=0.116 Sum_probs=141.0
Q ss_pred cCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCC
Q psy15421 52 RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREG 131 (340)
Q Consensus 52 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~ 131 (340)
..|...|.+++|+| +++|++++.|++|++||+.+++.+..+. |...|.+++|+|+++++++|+.|+.|++||+..+..
T Consensus 55 ~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 55 LEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQL 132 (902)
T ss_dssp CSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEE
T ss_pred cCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 35889999999999 8899999999999999999999888876 567899999999999999999999999999976432
Q ss_pred ceEEE-------EeecCCCcceEEEEEcCC--CeEEEEeCCCeEEEEECCCCceEEEEecC------------------C
Q psy15421 132 NVRVS-------RELPGHTGYLSCCRFLDD--NQIVTSSGDMSCALWDIETGQQCASFIGH------------------T 184 (340)
Q Consensus 132 ~~~~~-------~~~~~~~~~v~~~~~~~~--~~l~~~~~d~~v~iwd~~~~~~~~~~~~~------------------~ 184 (340)
..... ..+.+|...|.++.|+++ +.+++++.|+.| +||+++++....+..| .
T Consensus 133 ~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~ 211 (902)
T 2oaj_A 133 SSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRT 211 (902)
T ss_dssp EEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBC
T ss_pred ccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccC
Confidence 10000 234678899999999875 478889999999 9999999888877665 4
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeee
Q psy15421 185 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK 219 (340)
Q Consensus 185 ~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~ 219 (340)
..|.+++|+|++++|++|+.||+|++||+++++++
T Consensus 212 ~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 212 PKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp CCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence 67999999999999999999999999999776543
No 68
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=8.7e-40 Score=287.42 Aligned_cols=251 Identities=21% Similarity=0.313 Sum_probs=208.9
Q ss_pred EeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Q psy15421 47 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSL 126 (340)
Q Consensus 47 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~ 126 (340)
..+.+.+|...|.+++|+|++.+++|++.|++|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.|++|++
T Consensus 68 ~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~ 147 (343)
T 2xzm_R 68 PHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNI 147 (343)
T ss_dssp EEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEES
T ss_pred ccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEec
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCceEEEEeecCCCcceEEEEEcCC-----------CeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCC
Q psy15421 127 KTREGNVRVSRELPGHTGYLSCCRFLDD-----------NQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPD 195 (340)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----------~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 195 (340)
... .........+|...+.++.|.+. ..+++++.|+.|++||. ..+....+.+|...|.+++|+|+
T Consensus 148 ~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~ 224 (343)
T 2xzm_R 148 LGE--CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPN 224 (343)
T ss_dssp SSC--EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTT
T ss_pred cCC--ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCC
Confidence 632 11111223478889999999765 36899999999999995 45667788899999999999999
Q ss_pred CCEEEEEeCCCcEEEEECCCC-eeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEE--Eeec------
Q psy15421 196 MRTFVSGACDASAKLWDIRDG-SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA--MYSH------ 266 (340)
Q Consensus 196 ~~~~~sg~~dg~i~~wd~~~~-~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~--~~~~------ 266 (340)
+++|++|+.||.|++||++.. .....+. +...|.+++|+|++.+++++ .|+.|++||+.+.+... .+..
T Consensus 225 g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~ 302 (343)
T 2xzm_R 225 GKYIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKA 302 (343)
T ss_dssp SSEEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGB
T ss_pred CCEEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhh
Confidence 999999999999999999543 3344443 55679999999999877655 58889999997654432 2211
Q ss_pred ---CCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCc
Q psy15421 267 ---DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT 302 (340)
Q Consensus 267 ---~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~ 302 (340)
..+...+.+++|+|++++|++|+.||.|++|+..++
T Consensus 303 ~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 303 EGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp TTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred hhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 123345899999999999999999999999997654
No 69
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.1e-39 Score=331.15 Aligned_cols=291 Identities=24% Similarity=0.387 Sum_probs=254.8
Q ss_pred EEeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECC--CCCEEEEEeCCCeEEE
Q psy15421 46 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAP--SGSFVACGGLDNICSI 123 (340)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~--~~~~l~~~~~d~~v~i 123 (340)
....++.+|.+.|.+++|+|++++|++++.|++|++||+.+++.+..+..|...|.+++|+| ++.++++|+.|+.|++
T Consensus 648 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~v 727 (1249)
T 3sfz_A 648 EKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKL 727 (1249)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEE
T ss_pred CEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEE
Confidence 34567899999999999999999999999999999999999999999999999999999999 5668999999999999
Q ss_pred EEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEEEE----------------------
Q psy15421 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCASF---------------------- 180 (340)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~---------------------- 180 (340)
|++.++. ....+.+|...|.++.|++++ .+++++.|+.|++||+.+++....+
T Consensus 728 wd~~~~~----~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 803 (1249)
T 3sfz_A 728 WDLNQKE----CRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKC 803 (1249)
T ss_dssp EETTSSS----EEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCC
T ss_pred EECCCcc----hhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEE
Confidence 9997653 445677899999999998765 6889999999999999776543322
Q ss_pred ---------------------------------ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEecCCCC
Q psy15421 181 ---------------------------------IGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHES 227 (340)
Q Consensus 181 ---------------------------------~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~ 227 (340)
.+|...+.+++|+|++..+++++.||.|++||+.++.....+.+|..
T Consensus 804 ~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~ 883 (1249)
T 3sfz_A 804 CSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLS 883 (1249)
T ss_dssp CCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSS
T ss_pred EEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCcc
Confidence 15778899999999999999999999999999999999999999999
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcE-----------------------------EEEee-cC-----Ccccc
Q psy15421 228 DINAVTFFPNGWAFATGSDDATCRLFDIRADQE-----------------------------LAMYS-HD-----NIICG 272 (340)
Q Consensus 228 ~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~-----------------------------~~~~~-~~-----~~~~~ 272 (340)
.|.+++|+|++.++++++.|+.|++||+..... ..... .. .....
T Consensus 884 ~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 963 (1249)
T 3sfz_A 884 WVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQ 963 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSC
T ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCc
Confidence 999999999999999999999999999653100 00000 00 01235
Q ss_pred eEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 273 ITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 273 i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
+.+++|+|+++++++|+.||.|++|+..+++....+.+|...|++++|+|+|++|++++.||.|++||
T Consensus 964 i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd 1031 (1249)
T 3sfz_A 964 VSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWN 1031 (1249)
T ss_dssp EEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEE
T ss_pred EEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 88999999999999999999999999999999899999999999999999999999999999999996
No 70
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=6e-39 Score=291.81 Aligned_cols=275 Identities=26% Similarity=0.471 Sum_probs=243.0
Q ss_pred EeEEecCccCcE-EEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Q psy15421 47 TRRTLRGHLAKI-YAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYS 125 (340)
Q Consensus 47 ~~~~~~~h~~~v-~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~ 125 (340)
..+.+.+|.+.| .+ +++++++|++|+.||+|++||+.+++.+..+..|...|.++.|+ +.++++|+.|+.|++|+
T Consensus 110 ~~~~l~~h~~~v~~~--~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd 185 (445)
T 2ovr_B 110 SPKVLKGHDDHVITC--LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWN 185 (445)
T ss_dssp CCEEEECSTTSCEEE--EEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEE
T ss_pred eeEEecccCCCcEEE--EEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEE
Confidence 346789999875 55 44568899999999999999999999999999999999999997 67999999999999999
Q ss_pred ccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCC
Q psy15421 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACD 205 (340)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~d 205 (340)
+.+++ ....+.+|...+.++.+. ++.+++++.|+.|++||+.+++....+.+|...+.++++ +++.+++|+.|
T Consensus 186 ~~~~~----~~~~~~~h~~~v~~~~~~-~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d 258 (445)
T 2ovr_B 186 AETGE----CIHTLYGHTSTVRCMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYD 258 (445)
T ss_dssp TTTTE----EEEEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETT
T ss_pred CCcCc----EEEEECCCCCcEEEEEec-CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCC
Confidence 97652 456678899999998884 567999999999999999999999999999999999999 67899999999
Q ss_pred CcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEE
Q psy15421 206 ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLL 285 (340)
Q Consensus 206 g~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 285 (340)
|.|++||+++++++..+.+|...|.+++| ++.++++|+.|+.|++||+++++.+..+.. +...+.++.+ +++++
T Consensus 259 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~--~~~~l 332 (445)
T 2ovr_B 259 FMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG--HQSLTSGMEL--KDNIL 332 (445)
T ss_dssp SCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECC--CCSCEEEEEE--ETTEE
T ss_pred CEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcC--CcccEEEEEE--eCCEE
Confidence 99999999999999999999999999999 788999999999999999998887766542 2334666665 56799
Q ss_pred EEEeCCCcEEEEeCCCceeeeeecc---CCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 286 LAGYDDFNCNVWDSMKTERAGILAG---HDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 286 ~~g~~d~~i~iw~~~~~~~~~~~~~---h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
++|+.|+.|++||..+++.+..+.+ |...|++++|+ +.+|++|+.||.|++||
T Consensus 333 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd 388 (445)
T 2ovr_B 333 VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWD 388 (445)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEE
Confidence 9999999999999999988888876 88999999996 57999999999999996
No 71
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.7e-39 Score=283.95 Aligned_cols=246 Identities=19% Similarity=0.357 Sum_probs=216.5
Q ss_pred EeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCC------CeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCe
Q psy15421 47 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTT------NKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNI 120 (340)
Q Consensus 47 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~------~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~ 120 (340)
..+.+..|...|.+++|+|++..+++++.|+.+++|++... .....+..|...|.+++|+|++.+|++++.|++
T Consensus 98 ~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~ 177 (354)
T 2pbi_B 98 KEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGT 177 (354)
T ss_dssp EEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSE
T ss_pred cceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCc
Confidence 44667789999999999999999999999999999998643 234567789999999999999999999999999
Q ss_pred EEEEEccCCCCceEEEEeecCCCcceEEEEEcC---CCeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCC
Q psy15421 121 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD---DNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMR 197 (340)
Q Consensus 121 v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 197 (340)
|++||+.++. ....+.+|...+.++.+.+ +..+++++.|+.|++||+++++.+..+.+|...|.+++|+|++.
T Consensus 178 v~lwd~~~~~----~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~ 253 (354)
T 2pbi_B 178 CALWDVESGQ----LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGD 253 (354)
T ss_dssp EEEEETTTCC----EEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred EEEEeCCCCe----EEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCC
Confidence 9999997653 4456778999999888864 25799999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCcEEEEECCCCeeeeEecCC--CCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEE
Q psy15421 198 TFVSGACDASAKLWDIRDGSCKQTFPGH--ESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITS 275 (340)
Q Consensus 198 ~~~sg~~dg~i~~wd~~~~~~~~~~~~h--~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~ 275 (340)
++++|+.|++|++||++.+..+..+..+ ...+.+++|+|++.++++|+.|+.|++||+.+++.+..+. .+...|++
T Consensus 254 ~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~--~h~~~v~~ 331 (354)
T 2pbi_B 254 AFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILF--GHENRVST 331 (354)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC--CCSSCEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEE--CCCCcEEE
Confidence 9999999999999999998877666543 3578999999999999999999999999998887766553 33456999
Q ss_pred EEEcCCCcEEEEEeCCCcEEEEe
Q psy15421 276 VAFSRSGRLLLAGYDDFNCNVWD 298 (340)
Q Consensus 276 ~~~s~~~~~l~~g~~d~~i~iw~ 298 (340)
++|+|++++|++|+.|++|++|+
T Consensus 332 l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 332 LRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEECTTSSCEEEEETTSEEEEEC
T ss_pred EEECCCCCEEEEEcCCCCEEecC
Confidence 99999999999999999999996
No 72
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.1e-38 Score=276.58 Aligned_cols=247 Identities=26% Similarity=0.482 Sum_probs=219.9
Q ss_pred eeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEE
Q psy15421 89 KVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCA 167 (340)
Q Consensus 89 ~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~ 167 (340)
...++.+|...|.+++|+|++++|++++.|+.+++|++..+. ....+.+|...+.++.|.+++ .+++++.|+.|+
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~ 90 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK----FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLK 90 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc----cchhhccCCCceEEEEEcCCCCEEEEECCCCEEE
Confidence 456778999999999999999999999999999999987543 345677899999999998764 688999999999
Q ss_pred EEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCC
Q psy15421 168 LWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDD 247 (340)
Q Consensus 168 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d 247 (340)
+||+++++.+..+.+|...+.+++|+|+++++++|+.||.|++||++++++...+..|..+|.+++|+|++.++++++.|
T Consensus 91 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 91 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEE---EEECCCC
Q psy15421 248 ATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSC---LGVTEDG 324 (340)
Q Consensus 248 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~---~~~s~d~ 324 (340)
+.|++||+++.+.+..+.. .....+..++|+|++++|++++.|+.|++||..+++.+..+.+|...+.+ ....+++
T Consensus 171 ~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (312)
T 4ery_A 171 GLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 249 (312)
T ss_dssp SCEEEEETTTCCEEEEECC-SSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSS
T ss_pred CcEEEEECCCCceeeEEec-cCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCC
Confidence 9999999998877665432 22345889999999999999999999999999999999989888765433 3334788
Q ss_pred CEEEEeeCCCcEEecC
Q psy15421 325 MAVATGSWDSFLRIWN 340 (340)
Q Consensus 325 ~~l~s~s~D~~i~iW~ 340 (340)
.+|++|+.||.|++||
T Consensus 250 ~~l~sg~~dg~i~vwd 265 (312)
T 4ery_A 250 KWIVSGSEDNLVYIWN 265 (312)
T ss_dssp CEEEECCTTSCEEEEE
T ss_pred cEEEEECCCCEEEEEE
Confidence 9999999999999996
No 73
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.8e-39 Score=302.66 Aligned_cols=283 Identities=18% Similarity=0.269 Sum_probs=250.1
Q ss_pred EEeEEecCccCc-EEEEEEcC--CCCeEEEEeCCCeEEEEeCCCC--------CeeEEeeCCCCcEEEEEECCCCCEEEE
Q psy15421 46 RTRRTLRGHLAK-IYAMHWGS--DSRNLVSASQDGKLIVWDSYTT--------NKVHAIPLRSSWVMTCAYAPSGSFVAC 114 (340)
Q Consensus 46 ~~~~~~~~h~~~-v~~~~~s~--~~~~l~s~~~d~~i~iwd~~~~--------~~~~~~~~~~~~i~~v~~~~~~~~l~~ 114 (340)
...+.+.+|.+. |.+++|+| ++++|++++.||+|++||+.++ +....+..|...|.+++|+|++++|++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 355788999999 99999999 9999999999999999999744 566778889999999999999999999
Q ss_pred EeCC----CeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCC--eEEEEeCCCeEEEEECCCCceEEEEecCCC---
Q psy15421 115 GGLD----NICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN--QIVTSSGDMSCALWDIETGQQCASFIGHTG--- 185 (340)
Q Consensus 115 ~~~d----~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~--- 185 (340)
++.+ +.+.+|+. +. ....+.+|...+.++.|.+++ .+++++.|+.|++||+.+++....+.+|..
T Consensus 134 ~~~~~~~~~~v~~~d~--~~----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~ 207 (615)
T 1pgu_A 134 VGEGRDNFGVFISWDS--GN----SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGS 207 (615)
T ss_dssp EECCSSCSEEEEETTT--CC----EEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTC
T ss_pred eccCCCCccEEEEEEC--CC----cceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCc
Confidence 9988 67888873 22 345677899999999998876 689999999999999999999999999999
Q ss_pred CeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCeeeeEe-c---CCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcE
Q psy15421 186 DVMSLSLAPD-MRTFVSGACDASAKLWDIRDGSCKQTF-P---GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE 260 (340)
Q Consensus 186 ~v~~~~~~~~-~~~~~sg~~dg~i~~wd~~~~~~~~~~-~---~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 260 (340)
.+.+++|+|+ ++++++++.||.|++||+++++.+..+ . +|..+|.+++|+ ++.++++++.|+.|++||+++.+.
T Consensus 208 ~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~ 286 (615)
T 1pgu_A 208 FVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKC 286 (615)
T ss_dssp CEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEE
T ss_pred eEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcE
Confidence 9999999999 999999999999999999999998888 6 899999999999 999999999999999999998887
Q ss_pred EEEeecC--CcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEe
Q psy15421 261 LAMYSHD--NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 338 (340)
Q Consensus 261 ~~~~~~~--~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~i 338 (340)
+..+... .....+.++.|. ++.++++|+.|+.|++|+..+++.+..+.+|.+.|++++| |+ |++++.||.|++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~---l~~~~~dg~i~~ 361 (615)
T 1pgu_A 287 VQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP---LISGSYDGRIME 361 (615)
T ss_dssp EEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT---TEEEETTSCEEE
T ss_pred EEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC---cEEECCCCeEEE
Confidence 7666533 123457788885 8999999999999999999988888899999999999999 87 777888888888
Q ss_pred cC
Q psy15421 339 WN 340 (340)
Q Consensus 339 W~ 340 (340)
||
T Consensus 362 w~ 363 (615)
T 1pgu_A 362 WS 363 (615)
T ss_dssp TT
T ss_pred EE
Confidence 85
No 74
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.1e-39 Score=282.84 Aligned_cols=286 Identities=13% Similarity=0.179 Sum_probs=235.0
Q ss_pred EEeEEecCccCcEEEEEEcCC---CCeEEEEeCCCeEEEEeCCC-CCee-EEeeCCCCcEEEEEECCCCCEEEEEeCCCe
Q psy15421 46 RTRRTLRGHLAKIYAMHWGSD---SRNLVSASQDGKLIVWDSYT-TNKV-HAIPLRSSWVMTCAYAPSGSFVACGGLDNI 120 (340)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~s~~---~~~l~s~~~d~~i~iwd~~~-~~~~-~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~ 120 (340)
+..+.+++|.+.|++++|+|+ +++|++++.||.|++||+.+ +..+ ..+..|...|.+++|+|++++|++++.|+.
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 109 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKT 109 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCc
Confidence 455678999999999999999 59999999999999999987 5544 678889999999999999999999999999
Q ss_pred EEEEEccCCCCceEEEEeecCCCcceEEEEE--cCCC-eEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCC
Q psy15421 121 CSIYSLKTREGNVRVSRELPGHTGYLSCCRF--LDDN-QIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMR 197 (340)
Q Consensus 121 v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 197 (340)
|++|++.++. . .....|...+.++.| .+++ .+++++.|+.|++||+++++.+..+..+. .+.++.+.+ .
T Consensus 110 v~iwd~~~~~----~-~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~--~ 181 (368)
T 3mmy_A 110 AKMWDLSSNQ----A-IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVIY--P 181 (368)
T ss_dssp EEEEETTTTE----E-EEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEET--T
T ss_pred EEEEEcCCCC----c-eeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEecC--C
Confidence 9999997653 1 224568999999998 6665 58899999999999999998888877664 566666664 4
Q ss_pred EEEEEeCCCcEEEEECCCCeeeeEe--cCCCCCeEEEEEecCCCE----EEEEeCCCcEEEEeCcCC---cEEEEeecCC
Q psy15421 198 TFVSGACDASAKLWDIRDGSCKQTF--PGHESDINAVTFFPNGWA----FATGSDDATCRLFDIRAD---QELAMYSHDN 268 (340)
Q Consensus 198 ~~~sg~~dg~i~~wd~~~~~~~~~~--~~h~~~v~~v~~~~~~~~----l~s~s~d~~i~iwd~~~~---~~~~~~~~~~ 268 (340)
.+++++.|+.+++|+++........ ..+...+.++.+.++... +++++.|+.|++||++.. ..+..+....
T Consensus 182 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~ 261 (368)
T 3mmy_A 182 MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHR 261 (368)
T ss_dssp EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSE
T ss_pred eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeee
Confidence 7888999999999999876433222 234456777777766544 999999999999999875 2233322111
Q ss_pred ----------cccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEe
Q psy15421 269 ----------IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 338 (340)
Q Consensus 269 ----------~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~i 338 (340)
+...|++++|+|++++|++|+.|+.|++||..+++++..+.+|...|++++|+|+|.+|++||.|+..+.
T Consensus 262 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~ 341 (368)
T 3mmy_A 262 SNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKG 341 (368)
T ss_dssp EC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTC
T ss_pred cccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccccccc
Confidence 1115999999999999999999999999999999999999999999999999999999999999986554
Q ss_pred c
Q psy15421 339 W 339 (340)
Q Consensus 339 W 339 (340)
|
T Consensus 342 ~ 342 (368)
T 3mmy_A 342 H 342 (368)
T ss_dssp G
T ss_pred c
Confidence 4
No 75
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.7e-40 Score=293.82 Aligned_cols=257 Identities=20% Similarity=0.383 Sum_probs=218.0
Q ss_pred eEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-e
Q psy15421 78 KLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-Q 156 (340)
Q Consensus 78 ~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~ 156 (340)
.+..|+..+.....++.+|...|.+++|+|++++|++|+.|++|++||+.++. ....+..|...|.++.|++++ .
T Consensus 47 ~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~----~~~~~~~h~~~v~~~~~s~~g~~ 122 (380)
T 3iz6_a 47 TAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQ----KTHAIKLHCPWVMECAFAPNGQS 122 (380)
T ss_dssp GCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE----EEEEEECCCTTCCCCEECTTSSE
T ss_pred cccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc----cceEEecCCCCEEEEEECCCCCE
Confidence 34456666666778899999999999999999999999999999999987653 445677899999999998765 6
Q ss_pred EEEEeCCCeEEEEECCCCc-------eEEEEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCeeeeEe-----c
Q psy15421 157 IVTSSGDMSCALWDIETGQ-------QCASFIGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTF-----P 223 (340)
Q Consensus 157 l~~~~~d~~v~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~-~~~~sg~~dg~i~~wd~~~~~~~~~~-----~ 223 (340)
+++++.|+.+++||+.+.. ....+.+|.+.+.++.|.|++ ..+++|+.|++|++||+++++.+..+ .
T Consensus 123 las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~ 202 (380)
T 3iz6_a 123 VACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPS 202 (380)
T ss_dssp EEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSS
T ss_pred EEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCC
Confidence 8888999999999986532 234567899999999999974 57999999999999999999887776 6
Q ss_pred CCCCCeEEEEEec-CCCEEEEEeCCCcEEEEeCcC-CcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCC
Q psy15421 224 GHESDINAVTFFP-NGWAFATGSDDATCRLFDIRA-DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 301 (340)
Q Consensus 224 ~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~-~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~ 301 (340)
+|...|.+++|+| ++.+|++|+.|+.|++||++. .+.+..+. .+...|++++|+|++++|++|+.|++|++||..+
T Consensus 203 ~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~--~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~ 280 (380)
T 3iz6_a 203 GHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYH--GHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT 280 (380)
T ss_dssp SCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEEC--CCSSCCCEEEECTTSSEEEEECSSSCEEEEETTT
T ss_pred CCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEEC--CcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC
Confidence 7999999999987 789999999999999999974 34444332 3344699999999999999999999999999999
Q ss_pred ceeeeeeccCC-------cceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 302 TERAGILAGHD-------NRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 302 ~~~~~~~~~h~-------~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
++.+..+..|. ..|++++|+|+|.+|++|+.||.|++||
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd 326 (380)
T 3iz6_a 281 GHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWD 326 (380)
T ss_dssp TEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEE
T ss_pred CcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEE
Confidence 98887765543 3489999999999999999999999996
No 76
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.9e-38 Score=280.87 Aligned_cols=238 Identities=25% Similarity=0.398 Sum_probs=205.2
Q ss_pred cEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEE
Q psy15421 57 KIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVS 136 (340)
Q Consensus 57 ~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~ 136 (340)
.|.+++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|++|++||+.++. ..
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~----~~ 200 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ----CS 200 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE----EE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe----eE
Confidence 49999999999999999999999999999999889999999999999999999999999999999999997653 22
Q ss_pred EeecCCCcceEEEEEcC-C-CeEEEEeCCCeEEEEECCCCceEEEE-------ecCCCCeEEEEEcCCCCEEEEEeCCCc
Q psy15421 137 RELPGHTGYLSCCRFLD-D-NQIVTSSGDMSCALWDIETGQQCASF-------IGHTGDVMSLSLAPDMRTFVSGACDAS 207 (340)
Q Consensus 137 ~~~~~~~~~v~~~~~~~-~-~~l~~~~~d~~v~iwd~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~sg~~dg~ 207 (340)
..+. +...+.++.+.+ + ..+++++.|+.|++||+++++.+..+ .+|...|.+++|+|+++++++|+.||+
T Consensus 201 ~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~ 279 (393)
T 1erj_A 201 LTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 279 (393)
T ss_dssp EEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 2222 445677777865 4 57889999999999999998877666 578999999999999999999999999
Q ss_pred EEEEECCCC------------eeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEE
Q psy15421 208 AKLWDIRDG------------SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITS 275 (340)
Q Consensus 208 i~~wd~~~~------------~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~ 275 (340)
|++||+++. .+...+.+|...|.+++|+|++.+|++|+.|+.|++||..+++.+..+. .+...|.+
T Consensus 280 v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~--~h~~~v~~ 357 (393)
T 1erj_A 280 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ--GHRNSVIS 357 (393)
T ss_dssp EEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEE--CCSSCEEE
T ss_pred EEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEC--CCCCCEEE
Confidence 999999753 3456778999999999999999999999999999999999888776653 23346899
Q ss_pred EEEcC------CCcEEEEEeCCCcEEEEeCCC
Q psy15421 276 VAFSR------SGRLLLAGYDDFNCNVWDSMK 301 (340)
Q Consensus 276 ~~~s~------~~~~l~~g~~d~~i~iw~~~~ 301 (340)
++|+| ++++|++|+.|++|++|+...
T Consensus 358 v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 358 VAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred EEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 99876 689999999999999999653
No 77
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-38 Score=282.17 Aligned_cols=251 Identities=18% Similarity=0.251 Sum_probs=215.9
Q ss_pred eEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCC--CCCeeEEeeCCCCcEEEEEECCC--CCEEEEEeCCCeEEE
Q psy15421 48 RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSY--TTNKVHAIPLRSSWVMTCAYAPS--GSFVACGGLDNICSI 123 (340)
Q Consensus 48 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~~~~~~i~~v~~~~~--~~~l~~~~~d~~v~i 123 (340)
.+.+++|.+.|++++|+|++++|++++.||.|+|||+. +.+.+..+..|...|.+++|+|+ +.+|++++.|+.|++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~i 83 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 83 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEE
Confidence 45788999999999999999999999999999999987 55566788899999999999987 999999999999999
Q ss_pred EEccCCCCceEEEEeecCCCcceEEEEEcCC---CeEEEEeCCCeEEEEECCCCc--eEEEEecCCCCeEEEEEcC----
Q psy15421 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLDD---NQIVTSSGDMSCALWDIETGQ--QCASFIGHTGDVMSLSLAP---- 194 (340)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~l~~~~~d~~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~---- 194 (340)
|++..+. ......+..|...+.++.|.++ ..+++++.|+.|++||+..+. ....+..|...+.+++|+|
T Consensus 84 wd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 161 (379)
T 3jrp_A 84 WKEENGR--WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 161 (379)
T ss_dssp EEEETTE--EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC--
T ss_pred EEcCCCc--eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccc
Confidence 9997642 2345566789999999999875 478899999999999998873 3456678999999999999
Q ss_pred ---------CCCEEEEEeCCCcEEEEECCCCe----eeeEecCCCCCeEEEEEecC---CCEEEEEeCCCcEEEEeCcCC
Q psy15421 195 ---------DMRTFVSGACDASAKLWDIRDGS----CKQTFPGHESDINAVTFFPN---GWAFATGSDDATCRLFDIRAD 258 (340)
Q Consensus 195 ---------~~~~~~sg~~dg~i~~wd~~~~~----~~~~~~~h~~~v~~v~~~~~---~~~l~s~s~d~~i~iwd~~~~ 258 (340)
++.++++|+.||.|++||++++. ....+.+|..+|.+++|+|+ +.+|++++.||.|++||++..
T Consensus 162 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 162 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp --------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred ccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 68999999999999999998764 44677889999999999999 899999999999999999875
Q ss_pred c---EEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCC
Q psy15421 259 Q---ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 300 (340)
Q Consensus 259 ~---~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~ 300 (340)
. .........+...|.+++|+|++++|++++.||.|++|+..
T Consensus 242 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 242 QGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp TSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred CccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 3 22223333345579999999999999999999999999975
No 78
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-38 Score=311.49 Aligned_cols=204 Identities=14% Similarity=0.160 Sum_probs=174.2
Q ss_pred ecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCC
Q psy15421 51 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTRE 130 (340)
Q Consensus 51 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~ 130 (340)
..||.+.|++++|+|++++||+|+.||+|+|||..+.+..... .|...|.+++|+| +++|++++.|++|++||+.++.
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~ 90 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK 90 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCc
Confidence 3599999999999999999999999999999998776655444 4678899999999 8899999999999999998653
Q ss_pred CceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceE-----------EEEecCCCCeEEEEEcCC-CC
Q psy15421 131 GNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQC-----------ASFIGHTGDVMSLSLAPD-MR 197 (340)
Q Consensus 131 ~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~-----------~~~~~~~~~v~~~~~~~~-~~ 197 (340)
....+. |...|.++.|++++ .+++|+.|+.|++||+++++.. ..+.+|.+.|.+++|+|+ +.
T Consensus 91 ----~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~ 165 (902)
T 2oaj_A 91 ----VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIG 165 (902)
T ss_dssp ----EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEE
T ss_pred ----EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCC
Confidence 222332 66789999998764 6889999999999999987653 123568899999999996 46
Q ss_pred EEEEEeCCCcEEEEECCCCeeeeEecCC------------------CCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCc
Q psy15421 198 TFVSGACDASAKLWDIRDGSCKQTFPGH------------------ESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 259 (340)
Q Consensus 198 ~~~sg~~dg~i~~wd~~~~~~~~~~~~h------------------~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 259 (340)
.+++|+.||.| +||++++++...+..| ...|++++|+|+|.+|++|+.||.|++||+++++
T Consensus 166 ~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 166 TVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp EEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCC
T ss_pred EEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 88999999999 9999999988888765 4679999999999999999999999999998877
Q ss_pred EEE
Q psy15421 260 ELA 262 (340)
Q Consensus 260 ~~~ 262 (340)
.+.
T Consensus 245 ~~~ 247 (902)
T 2oaj_A 245 MIM 247 (902)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 79
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=6.6e-39 Score=287.76 Aligned_cols=281 Identities=16% Similarity=0.204 Sum_probs=232.0
Q ss_pred cEEEEEEcCCCCeEE-EEeCCCeEEEEeCCCCC----eeEEeeCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEEccCCC
Q psy15421 57 KIYAMHWGSDSRNLV-SASQDGKLIVWDSYTTN----KVHAIPLRSSWVMTCAYAP-SGSFVACGGLDNICSIYSLKTRE 130 (340)
Q Consensus 57 ~v~~~~~s~~~~~l~-s~~~d~~i~iwd~~~~~----~~~~~~~~~~~i~~v~~~~-~~~~l~~~~~d~~v~i~~~~~~~ 130 (340)
....++++|+...++ +++.||.|+||++.... ....+.+|...|.+++|+| ++.+|++|+.|+.|++|++..+.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 344678888875544 57899999999986542 3445678999999999999 99999999999999999998753
Q ss_pred Cce---EEEEeecCCCcceEEEEEcCCC--eEEEEeCCCeEEEEECCCCceEEEE--ecCCCCeEEEEEcCCCCEEEEEe
Q psy15421 131 GNV---RVSRELPGHTGYLSCCRFLDDN--QIVTSSGDMSCALWDIETGQQCASF--IGHTGDVMSLSLAPDMRTFVSGA 203 (340)
Q Consensus 131 ~~~---~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~d~~v~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~sg~ 203 (340)
... .....+.+|...|.++.|++++ .+++++.|+.|++||+++++....+ ..|...+.+++|+|+++++++++
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC 195 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe
Confidence 210 2335567899999999998764 6889999999999999999998888 78999999999999999999999
Q ss_pred CCCcEEEEECCCCeeeeEe-cCCCCC-eEEEEEecCCCEEEEE---eCCCcEEEEeCcCCcE-EEEeecCCcccceEEEE
Q psy15421 204 CDASAKLWDIRDGSCKQTF-PGHESD-INAVTFFPNGWAFATG---SDDATCRLFDIRADQE-LAMYSHDNIICGITSVA 277 (340)
Q Consensus 204 ~dg~i~~wd~~~~~~~~~~-~~h~~~-v~~v~~~~~~~~l~s~---s~d~~i~iwd~~~~~~-~~~~~~~~~~~~i~~~~ 277 (340)
.||.|++||+++++.+..+ .+|.+. +.++.|+|++.++++| +.|+.|++||+++.+. +.... ......+.+++
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~ 274 (402)
T 2aq5_A 196 RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQE-LDTSSGVLLPF 274 (402)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEE-CCCCSSCEEEE
T ss_pred cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEe-ccCCCceeEEE
Confidence 9999999999999988888 788775 8999999999999999 7999999999987543 22222 12234589999
Q ss_pred EcCCCcEEEE-EeCCCcEEEEeCCCcee-eeeecc--CCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 278 FSRSGRLLLA-GYDDFNCNVWDSMKTER-AGILAG--HDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 278 ~s~~~~~l~~-g~~d~~i~iw~~~~~~~-~~~~~~--h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
|+|++++|++ |+.|+.|++|+..+.+. +..+.. |...|.+++|+|++.++++ .|+.+++|+
T Consensus 275 ~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~ 339 (402)
T 2aq5_A 275 FDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYK 339 (402)
T ss_dssp EETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEE
T ss_pred EcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEE
Confidence 9999999964 55799999999987763 444444 5699999999999998775 567999995
No 80
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.1e-37 Score=298.88 Aligned_cols=251 Identities=24% Similarity=0.401 Sum_probs=216.1
Q ss_pred EeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Q psy15421 47 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSL 126 (340)
Q Consensus 47 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~ 126 (340)
..+.+.+|...|.+++|+|++++|+||+.|++|+|||+.+++....+..|...|.+++|+|++++|++|+.|++|++|+.
T Consensus 422 ~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~ 501 (694)
T 3dm0_A 422 AQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT 501 (694)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred ccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEC
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred cCCCCceEEEEeecCCCcceEEEEEcCCC---eEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEe
Q psy15421 127 KTREGNVRVSRELPGHTGYLSCCRFLDDN---QIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGA 203 (340)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~ 203 (340)
... ..........+|...|.++.|++++ .+++++.|++|++||+++++....+.+|.+.|.+++|+|+++++++|+
T Consensus 502 ~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~ 580 (694)
T 3dm0_A 502 LGE-CKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGG 580 (694)
T ss_dssp TSC-EEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCC-cceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEe
Confidence 532 1111222235788999999998753 589999999999999999999899999999999999999999999999
Q ss_pred CCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCC---------------
Q psy15421 204 CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDN--------------- 268 (340)
Q Consensus 204 ~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~--------------- 268 (340)
.||+|++||+++++.+..+.. ...|.+++|+|++.++++++ |+.|++||+++.+.+..+....
T Consensus 581 ~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (694)
T 3dm0_A 581 KDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAAT 658 (694)
T ss_dssp TTSBCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC--------------
T ss_pred CCCeEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccC
Confidence 999999999999998877764 46799999999998877766 5679999999877665442110
Q ss_pred --cccceEEEEEcCCCcEEEEEeCCCcEEEEeCC
Q psy15421 269 --IICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 300 (340)
Q Consensus 269 --~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~ 300 (340)
....+++++|+|+|++|++|+.||.|++|++.
T Consensus 659 ~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 659 KRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp --CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 11126889999999999999999999999964
No 81
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.9e-37 Score=300.54 Aligned_cols=289 Identities=18% Similarity=0.286 Sum_probs=246.4
Q ss_pred eEEeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEE
Q psy15421 45 MRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIY 124 (340)
Q Consensus 45 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~ 124 (340)
....+++.+|..+|.+++|+|++++|++++.||.|++||..+++.+..+..|...|.+++|+|++.++++++.|+.+++|
T Consensus 45 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw 124 (814)
T 3mkq_A 45 QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLW 124 (814)
T ss_dssp TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred CceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEE
Confidence 34567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCCCceEEEEeecCCCcceEEEEEcC-C-CeEEEEeCCCeEEEEECCCCceEEEEecCC-CCeEEEEEcC--CCCEE
Q psy15421 125 SLKTREGNVRVSRELPGHTGYLSCCRFLD-D-NQIVTSSGDMSCALWDIETGQQCASFIGHT-GDVMSLSLAP--DMRTF 199 (340)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~--~~~~~ 199 (340)
++..+. .....+.+|...+.++.|++ + ..+++++.|+.|++||+.+++....+..+. ..+.+++|+| ++.++
T Consensus 125 ~~~~~~---~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 201 (814)
T 3mkq_A 125 NWENNW---ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYM 201 (814)
T ss_dssp EGGGTS---EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEE
T ss_pred ECCCCc---eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEE
Confidence 997642 34456678999999999987 4 478899999999999998887777776654 7899999999 99999
Q ss_pred EEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEc
Q psy15421 200 VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS 279 (340)
Q Consensus 200 ~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s 279 (340)
++|+.||.|++||++++++...+.+|...|.+++|+|++.++++++.||.|++||+.+.+.+..+... ...+.+++|+
T Consensus 202 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~--~~~v~~~~~~ 279 (814)
T 3mkq_A 202 ITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVG--LERSWCIATH 279 (814)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCS--SSSEEEEEEC
T ss_pred EEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecC--CCcEEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999988777665433 3469999999
Q ss_pred CCCc--EEEEEeCCCcEEEEeCCCceeee-------------------------------------------eeccCCcc
Q psy15421 280 RSGR--LLLAGYDDFNCNVWDSMKTERAG-------------------------------------------ILAGHDNR 314 (340)
Q Consensus 280 ~~~~--~l~~g~~d~~i~iw~~~~~~~~~-------------------------------------------~~~~h~~~ 314 (340)
|++. ++++++ ++.+.+|+........ .+..|...
T Consensus 280 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (814)
T 3mkq_A 280 PTGRKNYIASGF-DNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVF 358 (814)
T ss_dssp TTCGGGEEEEEE-TTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSC
T ss_pred cCCCceEEEEEe-CCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccC
Confidence 9987 466665 5557788754321111 11334556
Q ss_pred eEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 315 VSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 315 i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
+.+++|+|+|++|++++ |+.+++|+
T Consensus 359 ~~~~~~spdg~~la~~~-~~~~~i~~ 383 (814)
T 3mkq_A 359 PQSLAHSPNGRFVTVVG-DGEYVIYT 383 (814)
T ss_dssp CSEEEECTTSSEEEEEE-TTEEEEEE
T ss_pred CceeEECCCCCEEEEec-CCEEEEEE
Confidence 88999999999999888 88999885
No 82
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-37 Score=273.93 Aligned_cols=251 Identities=16% Similarity=0.252 Sum_probs=212.2
Q ss_pred CeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcC---CCeEEEEeCCC
Q psy15421 88 NKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD---DNQIVTSSGDM 164 (340)
Q Consensus 88 ~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~l~~~~~d~ 164 (340)
+.+..+.+|...|.+++|+|++++|++|+.|+.|++|++.... ......+.+|...|.++.|.+ +..|++++.|+
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg 79 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET--HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 79 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCc--ceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC
Confidence 3456778999999999999999999999999999999997432 345567789999999999964 46789999999
Q ss_pred eEEEEECCCCc--eEEEEecCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCe--eeeEecCCCCCeEEEEEec--
Q psy15421 165 SCALWDIETGQ--QCASFIGHTGDVMSLSLAPD--MRTFVSGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFP-- 236 (340)
Q Consensus 165 ~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~sg~~dg~i~~wd~~~~~--~~~~~~~h~~~v~~v~~~~-- 236 (340)
.|++||+.+++ ....+..|...+.+++|+|+ +.++++++.||.|++||++.+. ....+.+|...|.+++|+|
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC
T ss_pred EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcc
Confidence 99999999887 66777889999999999999 8999999999999999998874 3456678999999999999
Q ss_pred -----------CCCEEEEEeCCCcEEEEeCcCCcEEEE--eecCCcccceEEEEEcCC---CcEEEEEeCCCcEEEEeCC
Q psy15421 237 -----------NGWAFATGSDDATCRLFDIRADQELAM--YSHDNIICGITSVAFSRS---GRLLLAGYDDFNCNVWDSM 300 (340)
Q Consensus 237 -----------~~~~l~s~s~d~~i~iwd~~~~~~~~~--~~~~~~~~~i~~~~~s~~---~~~l~~g~~d~~i~iw~~~ 300 (340)
++.++++|+.|+.|++||++....... .....+...|.+++|+|+ +++|++++.|+.|++|+..
T Consensus 160 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp ----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred ccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence 699999999999999999986543211 122334456999999999 8999999999999999987
Q ss_pred Cce-----eeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 301 KTE-----RAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 301 ~~~-----~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
+.. .......|...|++++|+|+|++|++++.||.|++||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~ 284 (379)
T 3jrp_A 240 NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 284 (379)
T ss_dssp STTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEE
T ss_pred CCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence 753 2333445889999999999999999999999999996
No 83
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.1e-36 Score=266.35 Aligned_cols=252 Identities=25% Similarity=0.420 Sum_probs=218.1
Q ss_pred EeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Q psy15421 47 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSL 126 (340)
Q Consensus 47 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~ 126 (340)
..+++++|...|.+++|+|++++|++++.|+.|++|+............+...+....+++++.++++++.|+.+++|+.
T Consensus 78 ~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~ 157 (340)
T 4aow_A 78 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 157 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred eeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEe
Confidence 45789999999999999999999999999999999999988888888888888999999999999999999999999998
Q ss_pred cCCCCceEEEEeecCCCcceEEEEEcCC---CeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEe
Q psy15421 127 KTREGNVRVSRELPGHTGYLSCCRFLDD---NQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGA 203 (340)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~ 203 (340)
.... .......+|...+..+.|..+ ..+++++.|+.|++||+++++....+.+|.+.|.+++|+|+++++++|+
T Consensus 158 ~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s 234 (340)
T 4aow_A 158 LGVC---KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGG 234 (340)
T ss_dssp TSCE---EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCc---eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEe
Confidence 5432 334456788999998888643 3577899999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeec-------CCcccceEEE
Q psy15421 204 CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSH-------DNIICGITSV 276 (340)
Q Consensus 204 ~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-------~~~~~~i~~~ 276 (340)
.||.|++||+++.+++..+..+ ..+.++.|+|++. +++++.|+.|++||++....+..+.. ..+...|+++
T Consensus 235 ~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 312 (340)
T 4aow_A 235 KDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSL 312 (340)
T ss_dssp TTCEEEEEETTTTEEEEEEECS-SCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEE
T ss_pred CCCeEEEEEeccCceeeeecCC-ceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEE
Confidence 9999999999999988888754 6899999999875 55666799999999988766554422 2234569999
Q ss_pred EEcCCCcEEEEEeCCCcEEEEeCCCce
Q psy15421 277 AFSRSGRLLLAGYDDFNCNVWDSMKTE 303 (340)
Q Consensus 277 ~~s~~~~~l~~g~~d~~i~iw~~~~~~ 303 (340)
+|+|++++|++|+.||.|++|++.++.
T Consensus 313 ~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 313 AWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 999999999999999999999988764
No 84
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-36 Score=277.14 Aligned_cols=279 Identities=11% Similarity=0.120 Sum_probs=226.9
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCC---eeEEeeC-------------------------------------
Q psy15421 56 AKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTN---KVHAIPL------------------------------------- 95 (340)
Q Consensus 56 ~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~---~~~~~~~------------------------------------- 95 (340)
.++.+++|+++|++|++ +.++.|++||+.+++ .+..+..
T Consensus 5 ~p~~~v~~s~dg~~l~~-~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFA-IIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEE-EETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEE-EeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 57899999999996655 467899999998888 5544442
Q ss_pred -----------------CCCcEEEEEECCCCCEE-EEEeCCCeEEEEEcc--CCCCceEEEEeecCCCcceEEEEEcCCC
Q psy15421 96 -----------------RSSWVMTCAYAPSGSFV-ACGGLDNICSIYSLK--TREGNVRVSRELPGHTGYLSCCRFLDDN 155 (340)
Q Consensus 96 -----------------~~~~i~~v~~~~~~~~l-~~~~~d~~v~i~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 155 (340)
|...|.+++|+|++++| ++++.|+.|++|++. .+. .........|...+.++.|++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~--~~~~~~~~~~~~~v~~~~~sp~~ 161 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKN--VLKLRKRFCFSKRPNAISIAEDD 161 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSS--CEEEEEEEECSSCEEEEEECTTS
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCc--eeeeeecccCCCCceEEEEcCCC
Confidence 22369999999999996 899999999999997 432 21122223567889999998765
Q ss_pred -eEEEEeCCCeEEEEECCCCceEE----EEecCCCCeEEEEEcCC---CCEEEEEeCCCcEEEEECCCCeeeeE-ecCCC
Q psy15421 156 -QIVTSSGDMSCALWDIETGQQCA----SFIGHTGDVMSLSLAPD---MRTFVSGACDASAKLWDIRDGSCKQT-FPGHE 226 (340)
Q Consensus 156 -~l~~~~~d~~v~iwd~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~~~sg~~dg~i~~wd~~~~~~~~~-~~~h~ 226 (340)
.|++++.++.+.+|++.+++... .+.+|...|.+++|+|+ ++++++|+.|+.|++||+++++++.. +.+|.
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~ 241 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHK 241 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCS
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCC
Confidence 68889999999999998876543 67789999999999999 99999999999999999999887776 56899
Q ss_pred CCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecC-----------------------CcccceEEEEEcCCCc
Q psy15421 227 SDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD-----------------------NIICGITSVAFSRSGR 283 (340)
Q Consensus 227 ~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~-----------------------~~~~~i~~~~~s~~~~ 283 (340)
..|.+++|+ ++.+|++|+.|+.|++||+.+++.+..+... .....+.+++|+|+++
T Consensus 242 ~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~ 320 (450)
T 2vdu_B 242 HFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLP 320 (450)
T ss_dssp SCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSS
T ss_pred CceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCC
Confidence 999999999 9999999999999999999988877665421 1224588999999999
Q ss_pred EEEEEe-CCCcEEEEeC--CCc---eeeeeeccCCcceEEEEECCCCCEEEEeeC------CCcEEec
Q psy15421 284 LLLAGY-DDFNCNVWDS--MKT---ERAGILAGHDNRVSCLGVTEDGMAVATGSW------DSFLRIW 339 (340)
Q Consensus 284 ~l~~g~-~d~~i~iw~~--~~~---~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~------D~~i~iW 339 (340)
+|++++ .|+.|++|++ .+. +.+..+..| +.|.+++|+|++.+++.++. +..|.+|
T Consensus 321 ~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~ 387 (450)
T 2vdu_B 321 FVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFI 387 (450)
T ss_dssp EEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEE
T ss_pred EEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEE
Confidence 999999 8999999998 554 667777788 89999999997654444443 4557776
No 85
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-38 Score=291.86 Aligned_cols=230 Identities=13% Similarity=0.045 Sum_probs=184.5
Q ss_pred CCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCC-------CeEEEEeCCCeEEEEECCCCce-----
Q psy15421 109 GSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD-------NQIVTSSGDMSCALWDIETGQQ----- 176 (340)
Q Consensus 109 ~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------~~l~~~~~d~~v~iwd~~~~~~----- 176 (340)
+..+++++.|++|+||++.+++........+.+|.+.|..+.|++. +.|++++.|++|++||+..++.
T Consensus 173 ~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~ 252 (524)
T 2j04_B 173 LEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVF 252 (524)
T ss_dssp ---------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEE
T ss_pred hhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccc
Confidence 3344556688999999997755333323345667888999999864 4788999999999999976532
Q ss_pred ------EEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe-eeeEecCCCCCeEEE--EEecCC-CEEEEEeC
Q psy15421 177 ------CASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS-CKQTFPGHESDINAV--TFFPNG-WAFATGSD 246 (340)
Q Consensus 177 ------~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~-~~~~~~~h~~~v~~v--~~~~~~-~~l~s~s~ 246 (340)
...+.+|...|.+++|+|++ .|++|+.||+|++||++++. +...+.+|..+|++| +|+|++ .+||||+.
T Consensus 253 ~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~ 331 (524)
T 2j04_B 253 KMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV 331 (524)
T ss_dssp ECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEET
T ss_pred eeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEecc
Confidence 23667899999999999864 89999999999999998764 445688999999999 567887 89999999
Q ss_pred CCcEEEEeCcCCcEEEEee-cCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCC
Q psy15421 247 DATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM 325 (340)
Q Consensus 247 d~~i~iwd~~~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~ 325 (340)
|++|++||+++.+.+..+. +.. ...|.+++|+|+++.+++++.|++|++||..++.+...+.+|.+.|++++|||+|+
T Consensus 332 D~tvklWD~~~~~~~~~~~~~~~-~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~ 410 (524)
T 2j04_B 332 DGYFYIFNPKDIATTKTTVSRFR-GSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHP 410 (524)
T ss_dssp TSEEEEECGGGHHHHCEEEEECS-CCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCC
T ss_pred CCeEEEEECCCCCcccccccccc-cCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCC
Confidence 9999999998766543332 221 12377899999999999999999999999998888788889999999999999999
Q ss_pred EEEEeeCCCcEEecC
Q psy15421 326 AVATGSWDSFLRIWN 340 (340)
Q Consensus 326 ~l~s~s~D~~i~iW~ 340 (340)
+|+|||.|++|++||
T Consensus 411 ~l~Sgs~Dgtv~lwd 425 (524)
T 2j04_B 411 MVLAGSADGSLIITN 425 (524)
T ss_dssp BCEEEETTTEEECCB
T ss_pred eEEEEECCCEEEEEe
Confidence 999999999999996
No 86
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.2e-36 Score=268.75 Aligned_cols=277 Identities=10% Similarity=0.092 Sum_probs=209.3
Q ss_pred EEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEE-EEEeCCCeEEEEEcc
Q psy15421 49 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFV-ACGGLDNICSIYSLK 127 (340)
Q Consensus 49 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l-~~~~~d~~v~i~~~~ 127 (340)
.++.+|.+.|++++|+||+++|++|+.|+ ++|||..+.+.......+ .+..+.+.++++++ ++++.|++|++||..
T Consensus 13 ~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~ 89 (355)
T 3vu4_A 13 VPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYVAFVTGVKEVVHIWDDV 89 (355)
T ss_dssp ------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS--CCCEEEECTTSSEEEEECSSTTEEEEEETT
T ss_pred cccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC--CeEEEEEcCCCCEEEEEECCccEEEEEECC
Confidence 35689999999999999999999888775 789998877665544332 36778888888877 567788999999987
Q ss_pred CCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCC-ceEEEEecCCCCeEEEEEcCCCCEEEE--EeC
Q psy15421 128 TREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETG-QQCASFIGHTGDVMSLSLAPDMRTFVS--GAC 204 (340)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~s--g~~ 204 (340)
++. ....+. +...+.++.+.++..+ . ..|+.|++||+.++ +.+..+.. +...+++++ .+++. |+.
T Consensus 90 ~~~----~~~~~~-~~~~v~~v~~~~~~~~-~-~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~ 157 (355)
T 3vu4_A 90 KKQ----DVSRIK-VDAPVKDLFLSREFIV-V-SYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFN 157 (355)
T ss_dssp TTE----EEEEEE-CSSCEEEEEECSSEEE-E-EETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSC
T ss_pred CCc----EEEEEE-CCCceEEEEEcCCEEE-E-EEcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCc
Confidence 653 223333 5567888888655433 3 35889999999987 55554443 344566777 45554 689
Q ss_pred CCcEEEEECCCCe----------------eeeEecCCCCCeEEEEEecCCCEEEEEeCCCc-EEEEeCcCCcEEEEeecC
Q psy15421 205 DASAKLWDIRDGS----------------CKQTFPGHESDINAVTFFPNGWAFATGSDDAT-CRLFDIRADQELAMYSHD 267 (340)
Q Consensus 205 dg~i~~wd~~~~~----------------~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~-i~iwd~~~~~~~~~~~~~ 267 (340)
||.|++||++++. +...+.+|..+|++++|+|++.+|++|+.|++ |++||+++++.+..+...
T Consensus 158 ~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g 237 (355)
T 3vu4_A 158 LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRG 237 (355)
T ss_dssp TTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECT
T ss_pred CcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC
Confidence 9999999999765 26788999999999999999999999999998 999999998888777522
Q ss_pred CcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCcee--eeeec---------------------cCCcceEEEEECCCC
Q psy15421 268 NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER--AGILA---------------------GHDNRVSCLGVTEDG 324 (340)
Q Consensus 268 ~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~--~~~~~---------------------~h~~~i~~~~~s~d~ 324 (340)
.+...|.+++|+|++++|++|+.|++|++||...... ...+. .+......++|++||
T Consensus 238 ~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~ 317 (355)
T 3vu4_A 238 LDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISES 317 (355)
T ss_dssp TCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSS
T ss_pred CCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCC
Confidence 2345799999999999999999999999999865421 11111 112234679999999
Q ss_pred CEEEEeeCCCcEEecC
Q psy15421 325 MAVATGSWDSFLRIWN 340 (340)
Q Consensus 325 ~~l~s~s~D~~i~iW~ 340 (340)
++|++++.||.+++|+
T Consensus 318 ~~l~~~~~dg~~~~~~ 333 (355)
T 3vu4_A 318 SLVVVWPHTRMIETFK 333 (355)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred CEEEEEeCCCeEEEEE
Confidence 9999999999999984
No 87
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.3e-36 Score=270.22 Aligned_cols=256 Identities=12% Similarity=0.141 Sum_probs=220.1
Q ss_pred EeEEecCccCcEEEEEEcCC----C---CeEEEEeCCCeEEEEeCCCCCe-----eEEeeCC-----CCcEEEEEEC---
Q psy15421 47 TRRTLRGHLAKIYAMHWGSD----S---RNLVSASQDGKLIVWDSYTTNK-----VHAIPLR-----SSWVMTCAYA--- 106 (340)
Q Consensus 47 ~~~~~~~h~~~v~~~~~s~~----~---~~l~s~~~d~~i~iwd~~~~~~-----~~~~~~~-----~~~i~~v~~~--- 106 (340)
....+.+|...|.+++|+|+ + ++|++++.|+.|++||+.+++. ...+..| ...|.+++|+
T Consensus 54 ~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 133 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 133 (397)
T ss_dssp GEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC
T ss_pred cceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeecc
Confidence 35677899999999999999 9 9999999999999999988876 7788888 5889999999
Q ss_pred -CCCCE-EEEEeCCCeEEEEEccC------CCCce-EEEEee-------cCCCcceEEEEEcCCCeEEEEeCCCeEEEEE
Q psy15421 107 -PSGSF-VACGGLDNICSIYSLKT------REGNV-RVSREL-------PGHTGYLSCCRFLDDNQIVTSSGDMSCALWD 170 (340)
Q Consensus 107 -~~~~~-l~~~~~d~~v~i~~~~~------~~~~~-~~~~~~-------~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd 170 (340)
|++.+ |++++.|+.|++|++.. ..... .....+ ..|...+.++.|.+++.+++++.|+.|++||
T Consensus 134 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d 213 (397)
T 1sq9_A 134 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISE 213 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEE
T ss_pred CCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEE
Confidence 99999 99999999999999987 33221 111133 4578889999998766777888999999999
Q ss_pred CCCCceEEEEec---C---CCCeEEEEEcCCCCEEEEEeCC---CcEEEEECCCCeeeeEecC-------------CCCC
Q psy15421 171 IETGQQCASFIG---H---TGDVMSLSLAPDMRTFVSGACD---ASAKLWDIRDGSCKQTFPG-------------HESD 228 (340)
Q Consensus 171 ~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~~~sg~~d---g~i~~wd~~~~~~~~~~~~-------------h~~~ 228 (340)
+++++.+..+.. | ...+.+++|+|+++++++++.| |.|++||+++++.+..+.+ |...
T Consensus 214 ~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (397)
T 1sq9_A 214 LSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW 293 (397)
T ss_dssp TTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC
T ss_pred CCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCc
Confidence 999999999988 8 9999999999999999999999 9999999999999999988 9999
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecC----Cc---------------ccceEEEEEcCCC-------
Q psy15421 229 INAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD----NI---------------ICGITSVAFSRSG------- 282 (340)
Q Consensus 229 v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~----~~---------------~~~i~~~~~s~~~------- 282 (340)
|.+++|+|++.+|++++.|+.|++||+++.+.+..+... .+ ...|++++|+|++
T Consensus 294 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~ 373 (397)
T 1sq9_A 294 VMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGA 373 (397)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTC
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccc
Confidence 999999999999999999999999999988887766510 22 4579999999998
Q ss_pred ---cEEEEEeCCCcEEEEeCCCc
Q psy15421 283 ---RLLLAGYDDFNCNVWDSMKT 302 (340)
Q Consensus 283 ---~~l~~g~~d~~i~iw~~~~~ 302 (340)
++|++|+.|+.|++|+..++
T Consensus 374 ~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 374 DLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp TTSCEEEEEETTTEEEEEEEEC-
T ss_pred cccceEEEecCCCcEEEEEcCCC
Confidence 79999999999999997664
No 88
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.2e-38 Score=279.80 Aligned_cols=242 Identities=16% Similarity=0.169 Sum_probs=199.8
Q ss_pred eeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCC-CeEEEEeCCCeEEEEEC
Q psy15421 93 IPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD-NQIVTSSGDMSCALWDI 171 (340)
Q Consensus 93 ~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~d~~v~iwd~ 171 (340)
...+...|.+++|+|++++|++|+.|+.|++|++.++. ......+.+|...|.++.|+++ ..|++++.|+.|++||+
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNG--WKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK 84 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTE--EEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCc--eEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 34456789999999999999999999999999997542 2344567789999999999876 47899999999999999
Q ss_pred CCCc---eEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe---eeeEecC-CCCCeEEEEEecCCCEEEEE
Q psy15421 172 ETGQ---QCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS---CKQTFPG-HESDINAVTFFPNGWAFATG 244 (340)
Q Consensus 172 ~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~---~~~~~~~-h~~~v~~v~~~~~~~~l~s~ 244 (340)
.+++ ....+..|...+.+++|+|+++++++|+.|+.|++||+++++ +...+.+ |...|.+++|+|++.+|+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 85 RPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp ----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence 9877 566778899999999999999999999999999999999876 3667777 99999999999999999999
Q ss_pred eCCCcEEEEeCcC------------------CcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCcee--
Q psy15421 245 SDDATCRLFDIRA------------------DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER-- 304 (340)
Q Consensus 245 s~d~~i~iwd~~~------------------~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~-- 304 (340)
+.|+.|++||+.. .+.+..+ .+...|.+++|+|++++|++|+.|+.|++||..+++.
T Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~ 241 (377)
T 3dwl_C 165 CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY---PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPP 241 (377)
T ss_dssp ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC---CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCE
T ss_pred eCCCEEEEEEEEecccCCCccccccccccchhhhhhcc---cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcc
Confidence 9999999999852 2223332 3445699999999999999999999999999988877
Q ss_pred --eeeeccCCcceEEEEECCCCCEEEEeeCCCcEEec
Q psy15421 305 --AGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 339 (340)
Q Consensus 305 --~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW 339 (340)
+..+.+|...|.+++|+|++++|++|+.|+.+.+|
T Consensus 242 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~ 278 (377)
T 3dwl_C 242 RALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQ 278 (377)
T ss_dssp EECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEEC
T ss_pred eeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEE
Confidence 78889999999999999999999999877777444
No 89
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.3e-36 Score=268.37 Aligned_cols=254 Identities=14% Similarity=0.225 Sum_probs=215.3
Q ss_pred EEec-CccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEcc
Q psy15421 49 RTLR-GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLK 127 (340)
Q Consensus 49 ~~~~-~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~ 127 (340)
+.+. .|...|.+++|+|++++|++|+.||.|++||+.+++.+..+..|...|.++.| ++.++++++.|+.|++|+++
T Consensus 127 ~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~ 204 (401)
T 4aez_A 127 ALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVR 204 (401)
T ss_dssp EEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT
T ss_pred EeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecc
Confidence 3444 38999999999999999999999999999999999999999999999999999 56899999999999999997
Q ss_pred CCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCC-EEEEEe--
Q psy15421 128 TREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMR-TFVSGA-- 203 (340)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~sg~-- 203 (340)
.... ....+.+|...+.++.|++++ .+++++.|+.|++||+++++....+..|...+.+++|+|++. ++++|+
T Consensus 205 ~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs 281 (401)
T 4aez_A 205 IANH---QIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGT 281 (401)
T ss_dssp SSSC---EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCT
T ss_pred cCcc---eeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCC
Confidence 5432 345567899999999998764 688999999999999999999889999999999999999765 555654
Q ss_pred CCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEE--eCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCC
Q psy15421 204 CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATG--SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRS 281 (340)
Q Consensus 204 ~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~--s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~ 281 (340)
.|+.|++||++++++...+. +...|.+++|+|++.+++++ +.||.|++||+.+.+.........+...|.+++|+|+
T Consensus 282 ~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~d 360 (401)
T 4aez_A 282 MDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPD 360 (401)
T ss_dssp TTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTT
T ss_pred CCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCC
Confidence 79999999999999888886 66789999999999999994 4899999999988665554433344457999999999
Q ss_pred CcEEEEEeCCCcEEEEeCCCceeeeee
Q psy15421 282 GRLLLAGYDDFNCNVWDSMKTERAGIL 308 (340)
Q Consensus 282 ~~~l~~g~~d~~i~iw~~~~~~~~~~~ 308 (340)
+++|++|+.|+.|++|+..+++.+...
T Consensus 361 g~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 361 GRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp SSEEEEECTTSEEEEEECCC-------
T ss_pred CCEEEEEeCCCcEEEEECCCCcccccc
Confidence 999999999999999999888766544
No 90
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-37 Score=296.12 Aligned_cols=251 Identities=18% Similarity=0.245 Sum_probs=212.4
Q ss_pred EEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCC--CCCeeEEeeCCCCcEEEEEECCC--CCEEEEEeCCCeEEEE
Q psy15421 49 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSY--TTNKVHAIPLRSSWVMTCAYAPS--GSFVACGGLDNICSIY 124 (340)
Q Consensus 49 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~~~~~~i~~v~~~~~--~~~l~~~~~d~~v~i~ 124 (340)
..+.||.+.|++++|+|++++|++|+.||+|++||+. +.+.+..+..|...|.+++|+|+ +.++++|+.|+.|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 4688999999999999999999999999999999987 44567788899999999999988 9999999999999999
Q ss_pred EccCCCCceEEEEeecCCCcceEEEEEcCC---CeEEEEeCCCeEEEEECCCCc--eEEEEecCCCCeEEEEEcC-----
Q psy15421 125 SLKTREGNVRVSRELPGHTGYLSCCRFLDD---NQIVTSSGDMSCALWDIETGQ--QCASFIGHTGDVMSLSLAP----- 194 (340)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~l~~~~~d~~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~----- 194 (340)
++.++. ........+|...+.++.|+++ ..+++++.|+.|++||++++. ....+.+|...+.+++|+|
T Consensus 83 d~~~~~--~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 83 KEENGR--WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (753)
T ss_dssp EEETTE--EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---
T ss_pred ECCCCc--ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccc
Confidence 997642 3345567789999999999875 478999999999999998773 3456678999999999999
Q ss_pred --------CCCEEEEEeCCCcEEEEECCCC----eeeeEecCCCCCeEEEEEecC---CCEEEEEeCCCcEEEEeCcCCc
Q psy15421 195 --------DMRTFVSGACDASAKLWDIRDG----SCKQTFPGHESDINAVTFFPN---GWAFATGSDDATCRLFDIRADQ 259 (340)
Q Consensus 195 --------~~~~~~sg~~dg~i~~wd~~~~----~~~~~~~~h~~~v~~v~~~~~---~~~l~s~s~d~~i~iwd~~~~~ 259 (340)
++..+++|+.||.|++||++++ .+...+.+|..+|.+++|+|+ +.++++|+.||.|++||++...
T Consensus 161 ~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp ------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred ccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 5899999999999999999877 456678899999999999999 8999999999999999998753
Q ss_pred EE---EEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCC
Q psy15421 260 EL---AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 301 (340)
Q Consensus 260 ~~---~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~ 301 (340)
.. .......+...|++++|+|+++++++|+.||.|++|+...
T Consensus 241 ~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 241 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred CcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 21 1112223445689999999999999999999999999763
No 91
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.9e-35 Score=266.83 Aligned_cols=265 Identities=14% Similarity=0.301 Sum_probs=212.8
Q ss_pred EecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCC
Q psy15421 50 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTR 129 (340)
Q Consensus 50 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~ 129 (340)
.+.+|.+.|++++|+|++++|++|+.||+|+|||+.+++.+..+..|...+.++.+ ++.+|++|+.|+.+++|+....
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~ 219 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVA 219 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSS
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCEEEEEeCCCceeEeeeccc
Confidence 34578889999999999999999999999999999999999999999998888765 5789999999999999998764
Q ss_pred CCceEEEEeecCCCcceEEEEEcCC-CeEEEEeCCCeEEEEECCCCc----eEEEEecCCCCeEEEEEcCCCC-EEEE--
Q psy15421 130 EGNVRVSRELPGHTGYLSCCRFLDD-NQIVTSSGDMSCALWDIETGQ----QCASFIGHTGDVMSLSLAPDMR-TFVS-- 201 (340)
Q Consensus 130 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~-~~~s-- 201 (340)
.. ....+.+|...+..+.+.++ ..+++++.|+.+++|+..+++ .+.....|...|.+++|+|++. .+++
T Consensus 220 ~~---~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~ 296 (420)
T 4gga_A 220 EH---HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGG 296 (420)
T ss_dssp SC---EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEE
T ss_pred ce---eeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEe
Confidence 42 34567789999999988766 468889999999999998765 3456678999999999999765 4444
Q ss_pred EeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEe--CCCcEEEEeCcCCcEEEEeecCCcccceEEEEEc
Q psy15421 202 GACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS--DDATCRLFDIRADQELAMYSHDNIICGITSVAFS 279 (340)
Q Consensus 202 g~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s--~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s 279 (340)
|+.|++|++||++++++...+..| ..+.++.|+|++..+++++ .|+.|++||+.+.+++..+. .+...|++++|+
T Consensus 297 gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~--gH~~~V~~l~~s 373 (420)
T 4gga_A 297 GTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK--GHTSRVLSLTMS 373 (420)
T ss_dssp CTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC--CCSSCEEEEEEC
T ss_pred ecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEc--CCCCCEEEEEEc
Confidence 457999999999999998888755 5688999999999888765 79999999999988887764 344579999999
Q ss_pred CCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECC
Q psy15421 280 RSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTE 322 (340)
Q Consensus 280 ~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~ 322 (340)
|+|++|++|+.|++|++|++...++......|...+....+..
T Consensus 374 pdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~~~s~~~ 416 (420)
T 4gga_A 374 PDGATVASAAADETLRLWRCFELDPARRREREKASAAKSSLIH 416 (420)
T ss_dssp TTSSCEEEEETTTEEEEECCSCSSCC-----------------
T ss_pred CCCCEEEEEecCCeEEEEECCCCCccchhhhccCCccccccCC
Confidence 9999999999999999999887766666655655554444433
No 92
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1e-35 Score=263.40 Aligned_cols=256 Identities=15% Similarity=0.159 Sum_probs=216.7
Q ss_pred EeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEE--eeCCCCcEEEEEECCCCCEEEEEeCCCeEEEE
Q psy15421 47 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHA--IPLRSSWVMTCAYAPSGSFVACGGLDNICSIY 124 (340)
Q Consensus 47 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~--~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~ 124 (340)
....+.+|...|.+++|+|++++|++++.|+.|++||+.+++.... +..|...|.+++|+|++++|++++.|+.+++|
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~ 123 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISIC 123 (372)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEE
T ss_pred eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEE
Confidence 5678899999999999999999999999999999999987764433 35688899999999999999999999999999
Q ss_pred EccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEEC------------------CCCceEEEEecCCC
Q psy15421 125 SLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDI------------------ETGQQCASFIGHTG 185 (340)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~------------------~~~~~~~~~~~~~~ 185 (340)
++..+...........+|...+.++.|.+++ .+++++.|+.|++||+ ..++.+..+..|..
T Consensus 124 d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (372)
T 1k8k_C 124 YFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCG 203 (372)
T ss_dssp EEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSS
T ss_pred EecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCC
Confidence 9987654333333446788999999998765 6888999999999995 36677888889999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcC--CcEEE-
Q psy15421 186 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA--DQELA- 262 (340)
Q Consensus 186 ~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~--~~~~~- 262 (340)
.+.+++|+|+++++++++.||.|++||+++++++..+..|..+|.+++|+|++.++++| .|+.|++|++.. ++-..
T Consensus 204 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~ 282 (372)
T 1k8k_C 204 WVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFG 282 (372)
T ss_dssp CEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEEC
T ss_pred eEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEe
Confidence 99999999999999999999999999999999999999999999999999999888887 899999999987 32000
Q ss_pred ----------------------------E-------ee-cCCcccceEEEEEc-CCC---cEEEEEeCCCcEEEEeCCCc
Q psy15421 263 ----------------------------M-------YS-HDNIICGITSVAFS-RSG---RLLLAGYDDFNCNVWDSMKT 302 (340)
Q Consensus 263 ----------------------------~-------~~-~~~~~~~i~~~~~s-~~~---~~l~~g~~d~~i~iw~~~~~ 302 (340)
. .. ...+...|++++|+ ++| ++|++|+.||.|++|++.++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~ 362 (372)
T 1k8k_C 283 GRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 362 (372)
T ss_dssp CCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred eccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecCh
Confidence 0 00 12345579999866 666 99999999999999997664
Q ss_pred e
Q psy15421 303 E 303 (340)
Q Consensus 303 ~ 303 (340)
+
T Consensus 363 ~ 363 (372)
T 1k8k_C 363 E 363 (372)
T ss_dssp H
T ss_pred h
Confidence 4
No 93
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-37 Score=269.22 Aligned_cols=269 Identities=14% Similarity=0.083 Sum_probs=209.5
Q ss_pred EEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCC------CceE
Q psy15421 61 MHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTRE------GNVR 134 (340)
Q Consensus 61 ~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~------~~~~ 134 (340)
..+.+++..+++|+.||+|++||+.+++.+..+. ...|.++.++|+ +++++.|+++++|+..... ....
T Consensus 42 ~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~ 116 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKV 116 (343)
T ss_dssp SSSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCE
T ss_pred hhhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcce
Confidence 3455688899999999999999999998877765 345667778887 9999999999999865311 1111
Q ss_pred EEEeecCCCcceEEEEEcC--CC-eEEEEeCCCeEEEEECCCCceEEEEe-cCCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q psy15421 135 VSRELPGHTGYLSCCRFLD--DN-QIVTSSGDMSCALWDIETGQQCASFI-GHTGDVMSLSLAPDMRTFVSGACDASAKL 210 (340)
Q Consensus 135 ~~~~~~~~~~~v~~~~~~~--~~-~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~sg~~dg~i~~ 210 (340)
......+|...+.++.|.+ ++ .+++++.|++|++||+++++...... .|...+.+++|+|++.++++|+.||.|++
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~i 196 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDV 196 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 2222336778899999987 54 68889999999999999998866553 35567999999999999999999999999
Q ss_pred EECCCCeee-eEecC-CCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeec-CCcccce--EEEEEcCCCcEE
Q psy15421 211 WDIRDGSCK-QTFPG-HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSH-DNIICGI--TSVAFSRSGRLL 285 (340)
Q Consensus 211 wd~~~~~~~-~~~~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-~~~~~~i--~~~~~s~~~~~l 285 (340)
||+++++.. ..++. |..+|++++|+|++.+|++++ |+.|++||+++.+.+..+.. ......+ .+++|+|++++|
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 275 (343)
T 3lrv_A 197 YNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNM 275 (343)
T ss_dssp EESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEE
T ss_pred EECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEE
Confidence 999999877 77887 999999999999999999999 55999999997765433221 0111122 469999999999
Q ss_pred EEEeC-CCcEEEEeCCCceeeeeeccCCcceEEEEECC---CCCEEEEeeCCCcEEec
Q psy15421 286 LAGYD-DFNCNVWDSMKTERAGILAGHDNRVSCLGVTE---DGMAVATGSWDSFLRIW 339 (340)
Q Consensus 286 ~~g~~-d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~---d~~~l~s~s~D~~i~iW 339 (340)
++++. |+.+++|+..+....-.. .++..++|++ +...|++++.|+.++++
T Consensus 276 ~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 276 IAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp EEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEE
T ss_pred EEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEE
Confidence 99998 999999997554322222 6677888888 88899999999998875
No 94
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-37 Score=280.37 Aligned_cols=267 Identities=13% Similarity=0.182 Sum_probs=217.9
Q ss_pred EcCCCCeEEEEeCCCeEEEEeCCCCCeeEEe-eCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEEccC---CCCceEEEE
Q psy15421 63 WGSDSRNLVSASQDGKLIVWDSYTTNKVHAI-PLRSSWVMTCAYAP-SGSFVACGGLDNICSIYSLKT---REGNVRVSR 137 (340)
Q Consensus 63 ~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~i~~v~~~~-~~~~l~~~~~d~~v~i~~~~~---~~~~~~~~~ 137 (340)
|+|++..+++++ .|+ .+++.+..+ ..|...|.+++|+| ++.+|++|+.|++|++|++.. +. ......
T Consensus 35 f~~~~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~-~~~~~~ 106 (437)
T 3gre_A 35 FGPIQEIVRSPN------MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGE-VYSSSL 106 (437)
T ss_dssp GCCCCCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTC-CCSCSE
T ss_pred cCCccccccccc------ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCc-ccceee
Confidence 678888777655 388 456777788 88899999999999 999999999999999999876 22 111111
Q ss_pred eecCCCcceEEEEEcCC-CeEEEEeCCCeEEEEECC---CCceEEEEec------------CCCCeEEEE--EcCCCCEE
Q psy15421 138 ELPGHTGYLSCCRFLDD-NQIVTSSGDMSCALWDIE---TGQQCASFIG------------HTGDVMSLS--LAPDMRTF 199 (340)
Q Consensus 138 ~~~~~~~~v~~~~~~~~-~~l~~~~~d~~v~iwd~~---~~~~~~~~~~------------~~~~v~~~~--~~~~~~~~ 199 (340)
.. .|...|.++.|.++ ..+++++.|+.|++||+. .++....+.. +...+.++. ++|++.++
T Consensus 107 ~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 185 (437)
T 3gre_A 107 TY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLL 185 (437)
T ss_dssp EE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEE
T ss_pred ec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEE
Confidence 22 48899999999875 468899999999999995 4544333221 445666666 56789999
Q ss_pred EEEeCCCcEEEEECCCCeeeeEecC--CCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEE
Q psy15421 200 VSGACDASAKLWDIRDGSCKQTFPG--HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVA 277 (340)
Q Consensus 200 ~sg~~dg~i~~wd~~~~~~~~~~~~--h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~ 277 (340)
++|+.||.|++||+++++++..+.+ |...|++++|+|++.+|++|+.||.|++||++..+.+..+... ...+|.+++
T Consensus 186 ~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~ 264 (437)
T 3gre_A 186 VALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFG-DHAPITHVE 264 (437)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCT-TCEEEEEEE
T ss_pred EEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecC-CCCceEEEE
Confidence 9999999999999999999999987 8899999999999999999999999999999988877765422 223689996
Q ss_pred Ec----CCCcEEEEEeCCCcEEEEeCCCceeeeeecc--------------------------CCcceEEEEECCCCCEE
Q psy15421 278 FS----RSGRLLLAGYDDFNCNVWDSMKTERAGILAG--------------------------HDNRVSCLGVTEDGMAV 327 (340)
Q Consensus 278 ~s----~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~--------------------------h~~~i~~~~~s~d~~~l 327 (340)
|+ |++++|++|+.|+.|++||..+++....+.+ |...|++++|+ ++.+|
T Consensus 265 ~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l 343 (437)
T 3gre_A 265 VCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKIL 343 (437)
T ss_dssp ECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEE
T ss_pred eccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEE
Confidence 65 5688999999999999999998887666553 55678899999 77899
Q ss_pred EEeeCCCcEEecC
Q psy15421 328 ATGSWDSFLRIWN 340 (340)
Q Consensus 328 ~s~s~D~~i~iW~ 340 (340)
++|+.|+.|++||
T Consensus 344 ~s~~~d~~i~~wd 356 (437)
T 3gre_A 344 LTDEATSSIVMFS 356 (437)
T ss_dssp EEEGGGTEEEEEE
T ss_pred EecCCCCeEEEEE
Confidence 9999999999996
No 95
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1e-36 Score=269.02 Aligned_cols=241 Identities=17% Similarity=0.248 Sum_probs=207.0
Q ss_pred ccCcEEEEEEcCC----CCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEEccC
Q psy15421 54 HLAKIYAMHWGSD----SRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAP-SGSFVACGGLDNICSIYSLKT 128 (340)
Q Consensus 54 h~~~v~~~~~s~~----~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~-~~~~l~~~~~d~~v~i~~~~~ 128 (340)
|...|++++|+|+ +++|++++.||.|++||+.+++.+..+..|...|.+++|+| ++.+|++++.|+.|++|++.+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 6688999999999 66899999999999999999999999999999999999999 999999999999999999976
Q ss_pred CCCceEEEEee---cCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEEEEe-----------------------
Q psy15421 129 REGNVRVSREL---PGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCASFI----------------------- 181 (340)
Q Consensus 129 ~~~~~~~~~~~---~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~----------------------- 181 (340)
+. ....+ .+|...+.++.|.+++ .+++++.|+.|++||+++++....+.
T Consensus 148 ~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (366)
T 3k26_A 148 DT----LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPD 223 (366)
T ss_dssp TE----EEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCS
T ss_pred Ce----EEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCc
Confidence 53 23334 6899999999998764 78899999999999998765433222
Q ss_pred -----cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCee--------------eeEecCCCCCeEEEEEecC--CCE
Q psy15421 182 -----GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC--------------KQTFPGHESDINAVTFFPN--GWA 240 (340)
Q Consensus 182 -----~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~--------------~~~~~~h~~~v~~v~~~~~--~~~ 240 (340)
.|...|.+++|+ ++++++++.||.|++||++++.. +..+.+|...|.+++|+|+ +.+
T Consensus 224 ~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~ 301 (366)
T 3k26_A 224 FSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKM 301 (366)
T ss_dssp EEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSE
T ss_pred cccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcE
Confidence 388999999998 67999999999999999987643 6778889999999999999 999
Q ss_pred EEEEeCCCcEEEEeCcCCcE----EEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCC
Q psy15421 241 FATGSDDATCRLFDIRADQE----LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 300 (340)
Q Consensus 241 l~s~s~d~~i~iwd~~~~~~----~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~ 300 (340)
|++|+.||.|++||+...+. ...+....+...|++++|+|++++|++|+.||.|++||+.
T Consensus 302 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 302 LALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 99999999999999987643 2233333224579999999999999999999999999974
No 96
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-35 Score=257.83 Aligned_cols=256 Identities=16% Similarity=0.227 Sum_probs=222.7
Q ss_pred eEEeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCC-----C
Q psy15421 45 MRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLD-----N 119 (340)
Q Consensus 45 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d-----~ 119 (340)
.+...++.+|...|.+++|+|++++|++++.||.|++||+.+++.+..+. +...+.+++|+|+++++++++.+ +
T Consensus 64 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g 142 (369)
T 3zwl_B 64 GERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPG 142 (369)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCC
T ss_pred chhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCC
Confidence 34567899999999999999999999999999999999999999888887 77889999999999999999999 9
Q ss_pred eEEEEEccCCCCceEE-------EEeecCCCc--ceEEEEEcCCC-eEEEEeCCCeEEEEECCC-CceEEEEecCCCCeE
Q psy15421 120 ICSIYSLKTREGNVRV-------SRELPGHTG--YLSCCRFLDDN-QIVTSSGDMSCALWDIET-GQQCASFIGHTGDVM 188 (340)
Q Consensus 120 ~v~i~~~~~~~~~~~~-------~~~~~~~~~--~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~-~~~~~~~~~~~~~v~ 188 (340)
.+++|++......... ...+..|.. .+.++.|.+++ .+++++.|+.|.+||+.+ ++....+..|...+.
T Consensus 143 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 222 (369)
T 3zwl_B 143 SINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSIS 222 (369)
T ss_dssp EEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEE
T ss_pred EEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCcee
Confidence 9999999865432111 123344555 78888887664 688899999999999998 677888889999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCC--------------cEEEEe
Q psy15421 189 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA--------------TCRLFD 254 (340)
Q Consensus 189 ~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~--------------~i~iwd 254 (340)
+++|+|+++++++++.||.|++||+++++....+. +..++.+++|+|++.++++++.++ .+++||
T Consensus 223 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d 301 (369)
T 3zwl_B 223 DMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYH 301 (369)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEE
T ss_pred EEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEe
Confidence 99999999999999999999999999999888887 778899999999999999999998 899999
Q ss_pred CcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCcee
Q psy15421 255 IRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER 304 (340)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~ 304 (340)
..+.+.+..+.. +...|++++|+|++++|++|+.|+.|++|+..+...
T Consensus 302 ~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 349 (369)
T 3zwl_B 302 KIFEEEIGRVQG--HFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYF 349 (369)
T ss_dssp TTTCCEEEEEEC--CSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHH
T ss_pred cCCCcchhheec--ccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccc
Confidence 998887766542 234699999999999999999999999999876543
No 97
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.7e-36 Score=273.03 Aligned_cols=243 Identities=24% Similarity=0.374 Sum_probs=200.5
Q ss_pred CCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCC-------CceEEEEeecCCC------------cceEEEEEcCC--
Q psy15421 96 RSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTRE-------GNVRVSRELPGHT------------GYLSCCRFLDD-- 154 (340)
Q Consensus 96 ~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~-------~~~~~~~~~~~~~------------~~v~~~~~~~~-- 154 (340)
+...|.+++|+|++.+|++|+.|+.|++|++..+. ........+.+|. ..|.++.|.++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 45789999999999999999999999999997654 2333556777898 88999999876
Q ss_pred -CeEEEEeCCCeEEEEECCCCceE---------------------------------------EE-EecCCCCeEEEEEc
Q psy15421 155 -NQIVTSSGDMSCALWDIETGQQC---------------------------------------AS-FIGHTGDVMSLSLA 193 (340)
Q Consensus 155 -~~l~~~~~d~~v~iwd~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~~ 193 (340)
..+++++.|+.|++||+.+++.. .. ..+|...|.+++|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 47899999999999999764431 12 25799999999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCC-Ceeee-------EecCCCCCeEEEEEecCC-CEEEEEeCCCcEEEEeCcCCcE----
Q psy15421 194 PDMRTFVSGACDASAKLWDIRD-GSCKQ-------TFPGHESDINAVTFFPNG-WAFATGSDDATCRLFDIRADQE---- 260 (340)
Q Consensus 194 ~~~~~~~sg~~dg~i~~wd~~~-~~~~~-------~~~~h~~~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~~~~~---- 260 (340)
|+++++++| .|+.|++||+++ +.... .+.+|...|.+++|+|++ .+|++|+.||.|++||+++.+.
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 265 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRH 265 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTT
T ss_pred CCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccce
Confidence 999999998 899999999984 33443 356899999999999998 9999999999999999987664
Q ss_pred EEEeecCCc----------ccceEEEEEcCCCcEEEEEeCCCcEEEEeCCC-ceeeeeeccCCcc---------------
Q psy15421 261 LAMYSHDNI----------ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK-TERAGILAGHDNR--------------- 314 (340)
Q Consensus 261 ~~~~~~~~~----------~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~-~~~~~~~~~h~~~--------------- 314 (340)
+..+..... ...|.+++|+|++++|++++. +.|++||..+ ++++..+.+|...
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~ 344 (447)
T 3dw8_B 266 SKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFD 344 (447)
T ss_dssp CEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGC
T ss_pred eeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccccc
Confidence 344432211 126999999999999999999 9999999987 7788888888642
Q ss_pred eEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 315 VSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 315 i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
+..++|+|++.+|++|+.||.|++||
T Consensus 345 ~~~~~~s~~~~~l~s~s~dg~v~iwd 370 (447)
T 3dw8_B 345 KFECCWNGSDSVVMTGSYNNFFRMFD 370 (447)
T ss_dssp CCCEEECTTSSEEEEECSTTEEEEEE
T ss_pred ceEEEECCCCCEEEEeccCCEEEEEE
Confidence 33499999999999999999999996
No 98
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.7e-35 Score=263.72 Aligned_cols=250 Identities=16% Similarity=0.147 Sum_probs=209.0
Q ss_pred EeCCCCCeeEEeeCCCCcEEEEEECCCC-CEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcC-C-CeEE
Q psy15421 82 WDSYTTNKVHAIPLRSSWVMTCAYAPSG-SFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD-D-NQIV 158 (340)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~v~~~~~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~l~ 158 (340)
|+....+....+..|...|.+++|+|++ ++|++|+.|+.|++|++..+... ......+|...|.++.|++ + ..++
T Consensus 58 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~l~ 135 (383)
T 3ei3_B 58 RSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKT--SFIQGMGPGDAITGMKFNQFNTNQLF 135 (383)
T ss_dssp HHHTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCE--EEECCCSTTCBEEEEEEETTEEEEEE
T ss_pred ccccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccc--eeeecCCcCCceeEEEeCCCCCCEEE
Confidence 3334455566778899999999999999 99999999999999999865422 2233457999999999987 4 5788
Q ss_pred EEeCCCeEEEEECCCCceEEEEecC---CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEe
Q psy15421 159 TSSGDMSCALWDIETGQQCASFIGH---TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFF 235 (340)
Q Consensus 159 ~~~~d~~v~iwd~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~ 235 (340)
+++.|+.|++||+++ +....+..+ ...+.+++|+|+++++++|+.||.|++||+ +++.+..+.+|...|.+++|+
T Consensus 136 s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~ 213 (383)
T 3ei3_B 136 VSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFN 213 (383)
T ss_dssp EEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEEC
T ss_pred EEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEEC
Confidence 999999999999986 555555544 478999999999999999999999999999 467788899999999999999
Q ss_pred cCCC-EEEEEeCCCcEEEEeCcC----CcEEEEeecCCcccceEEEEEcC-CCcEEEEEeCCCcEEEEeCCCceeeeeec
Q psy15421 236 PNGW-AFATGSDDATCRLFDIRA----DQELAMYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNVWDSMKTERAGILA 309 (340)
Q Consensus 236 ~~~~-~l~s~s~d~~i~iwd~~~----~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~g~~d~~i~iw~~~~~~~~~~~~ 309 (340)
|++. ++++|+.|+.|++||+++ ...+..+.+ ...|.+++|+| ++++|++++.|+.|++||..+++....+.
T Consensus 214 ~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 290 (383)
T 3ei3_B 214 PRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPH---EKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQII 290 (383)
T ss_dssp SSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEEC---SSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEE
T ss_pred CCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecC---CCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccc
Confidence 9998 999999999999999987 555555544 34699999999 99999999999999999998887766666
Q ss_pred cCC-----------------cceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 310 GHD-----------------NRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 310 ~h~-----------------~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
+|. +.+..++|+|||++ +|+.|+.|+|||
T Consensus 291 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd 336 (383)
T 3ei3_B 291 IHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYD 336 (383)
T ss_dssp ECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEE
T ss_pred cccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEe
Confidence 553 34555788888877 889999999996
No 99
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=5.1e-35 Score=249.72 Aligned_cols=277 Identities=12% Similarity=0.150 Sum_probs=199.0
Q ss_pred EEEEEEcCCCC---eEEEEeCCCeEEEEeCCCC---CeeEEeeCCCCcEEEEEECCCCCEEEEEe--CCCeEEEEEccCC
Q psy15421 58 IYAMHWGSDSR---NLVSASQDGKLIVWDSYTT---NKVHAIPLRSSWVMTCAYAPSGSFVACGG--LDNICSIYSLKTR 129 (340)
Q Consensus 58 v~~~~~s~~~~---~l~s~~~d~~i~iwd~~~~---~~~~~~~~~~~~i~~v~~~~~~~~l~~~~--~d~~v~i~~~~~~ 129 (340)
+.++.|-..+- -+++++. .+|++|+..++ +++++...|..+|..+.+.||..-|++.. .=..-.++.+.-.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~s 120 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCS 120 (356)
T ss_dssp EEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEEC
Confidence 55666755442 4666665 58999999998 78899999999999999999755444332 2222222322211
Q ss_pred CC--ceEEEEeecCCCcceEEEEEcCCCeEEEEeC---CCeEEEEEC-CCCceEEEEecCCCCeEEEEEcC---CCCEEE
Q psy15421 130 EG--NVRVSRELPGHTGYLSCCRFLDDNQIVTSSG---DMSCALWDI-ETGQQCASFIGHTGDVMSLSLAP---DMRTFV 200 (340)
Q Consensus 130 ~~--~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~---d~~v~iwd~-~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~ 200 (340)
.. .........+|...+..+ ++++++.++. |+.|++|++ ..++.+..+..|...+..++|+| ++..++
T Consensus 121 pd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~La 197 (356)
T 2w18_A 121 SDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALL 197 (356)
T ss_dssp -----CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEE
T ss_pred CCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEE
Confidence 11 001111112344334332 5677776654 999999999 44888888889999999999999 779999
Q ss_pred EEeCCCcEEEEECCCCeeeeEecCCC---CCeEEEEEecCCCEE------------EEEeCCCcEEEEeCcCCcEEEEee
Q psy15421 201 SGACDASAKLWDIRDGSCKQTFPGHE---SDINAVTFFPNGWAF------------ATGSDDATCRLFDIRADQELAMYS 265 (340)
Q Consensus 201 sg~~dg~i~~wd~~~~~~~~~~~~h~---~~v~~v~~~~~~~~l------------~s~s~d~~i~iwd~~~~~~~~~~~ 265 (340)
+|+.|++|++||++++++++++.+|. ..+.+++|+|+|.++ ++|+.|++|++||..+++.+..+.
T Consensus 198 SgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~ 277 (356)
T 2w18_A 198 GTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVML 277 (356)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEE
T ss_pred EecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEE
Confidence 99999999999999999999998654 367788999999876 678899999999999887765442
Q ss_pred ---cCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceE-EEEECCCCCEEEEeeCCCcEEecC
Q psy15421 266 ---HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVS-CLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 266 ---~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~-~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
...+...+.+..+ ++.++++|+.|++|+|||..+++++.++.+|...+. +++|||||++|+|||.|++|||||
T Consensus 278 ~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 278 YCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp ECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred eeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEec
Confidence 1122222333333 378999999999999999999999999999987665 689999999999999999999996
No 100
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-36 Score=275.21 Aligned_cols=258 Identities=10% Similarity=0.111 Sum_probs=208.4
Q ss_pred cCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceE
Q psy15421 55 LAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVR 134 (340)
Q Consensus 55 ~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~ 134 (340)
...|.+++|+|||+++||++.|++|+ |....+ .+.+|...|..++|+|+| .++++.+|+. ++...
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~---~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~---~~~~~ 79 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK---DINCNSKNLFHVKEFPLE-------FENKLDFELA---QQNGL 79 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECCCS---CCSSBGGGTEEEEEECCC-------CCCTTTTSCC---CSSCS
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--cccccc---eecCCCccEEEEEECCCC-------CcceEEEEeC---CCceE
Confidence 47899999999999999999999999 755554 447899999999999999 4555555543 32211
Q ss_pred EEEeecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEEEEecCCC-----CeEEEEEcCCCCEEEEEeCCCcE
Q psy15421 135 VSRELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCASFIGHTG-----DVMSLSLAPDMRTFVSGACDASA 208 (340)
Q Consensus 135 ~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~sg~~dg~i 208 (340)
..+ .|...|.++.|++++ .+++++.||.|++||.++ .+..+. |.. .+.+++|+|+++++++|+.||+|
T Consensus 80 --~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtV 153 (588)
T 2j04_A 80 --LNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGEL 153 (588)
T ss_dssp --STT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEE
T ss_pred --eec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEE
Confidence 111 457889999999876 588999999999999654 445555 655 49999999999999999999999
Q ss_pred EEEECCCCee-------eeEe----cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEE---EEeecCCcccceE
Q psy15421 209 KLWDIRDGSC-------KQTF----PGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL---AMYSHDNIICGIT 274 (340)
Q Consensus 209 ~~wd~~~~~~-------~~~~----~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~---~~~~~~~~~~~i~ 274 (340)
++||+..+.. +.++ .+|...|.+++|+|+| +++++.|+.+++||+...... ..+.. .+...|.
T Consensus 154 kIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~-~h~~~V~ 230 (588)
T 2j04_A 154 QFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQN-ASRRKIT 230 (588)
T ss_dssp EEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEEC-CCSSCCC
T ss_pred EEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecc-cccCcEE
Confidence 9999998752 4565 6788899999999999 889999999999999876532 23311 2224589
Q ss_pred EEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEE--CCCCCEEEEeeCCCcEEecC
Q psy15421 275 SVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGV--TEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 275 ~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~--s~d~~~l~s~s~D~~i~iW~ 340 (340)
+++|+ +++||+++ +++|++|+..+.+......+|.+.|+.++| +||+..|++++.||+ ++|.
T Consensus 231 svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~ 294 (588)
T 2j04_A 231 DLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLL 294 (588)
T ss_dssp CEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEE
T ss_pred EEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEe
Confidence 99999 68999887 689999998887774444489999999999 999999999999999 9983
No 101
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=260.76 Aligned_cols=244 Identities=18% Similarity=0.256 Sum_probs=204.7
Q ss_pred EEeeCCCCcEEEEEECCCCCEE-EEEeC---CCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCC----CeEEEEeC
Q psy15421 91 HAIPLRSSWVMTCAYAPSGSFV-ACGGL---DNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD----NQIVTSSG 162 (340)
Q Consensus 91 ~~~~~~~~~i~~v~~~~~~~~l-~~~~~---d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~l~~~~~ 162 (340)
.....|...|.+++|+|++..+ ++|+. |+.|++|++.++... .....+|...|.++.|.++ ..+++++.
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~ 88 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLK---LLREIEKAKPIKCGTFGATSLQQRYLATGDF 88 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEE---EEEEEEESSCEEEEECTTCCTTTCCEEEEET
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCccc---ceeeecccCcEEEEEEcCCCCCCceEEEecC
Confidence 3456799999999999998655 55655 899999999765421 1222368889999999876 67999999
Q ss_pred CCeEEEEECCCCc-eEEEEecCCCCeEEEE------EcCCCCEEEEEeCCCcEEEEECCCCe-eeeEecCCCC----CeE
Q psy15421 163 DMSCALWDIETGQ-QCASFIGHTGDVMSLS------LAPDMRTFVSGACDASAKLWDIRDGS-CKQTFPGHES----DIN 230 (340)
Q Consensus 163 d~~v~iwd~~~~~-~~~~~~~~~~~v~~~~------~~~~~~~~~sg~~dg~i~~wd~~~~~-~~~~~~~h~~----~v~ 230 (340)
|+.|++||+.+++ ....+.+|...+.+++ |+|+++++++|+.||.|++||++++. ....+..|.+ .+.
T Consensus 89 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~ 168 (357)
T 3i2n_A 89 GGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCW 168 (357)
T ss_dssp TSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEE
T ss_pred CCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceE
Confidence 9999999999887 7888899999999995 46889999999999999999999886 6777766554 789
Q ss_pred EEE----EecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcC---CCcEEEEEeCCCcEEEEeCCCce
Q psy15421 231 AVT----FFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR---SGRLLLAGYDDFNCNVWDSMKTE 303 (340)
Q Consensus 231 ~v~----~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~---~~~~l~~g~~d~~i~iw~~~~~~ 303 (340)
+++ |+|++.++++++.|+.|++||+++.+......+. ..|.+++|+| ++.+|++|+.|+.|++||..+.+
T Consensus 169 ~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 169 TVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIK---NGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp EEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECS---SCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEE
T ss_pred EEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCC---CceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC
Confidence 998 6789999999999999999999988776554443 3599999999 99999999999999999988776
Q ss_pred eeeeec-----cCCcceEEEEECCCCC-EEEEeeCCCcEEecC
Q psy15421 304 RAGILA-----GHDNRVSCLGVTEDGM-AVATGSWDSFLRIWN 340 (340)
Q Consensus 304 ~~~~~~-----~h~~~i~~~~~s~d~~-~l~s~s~D~~i~iW~ 340 (340)
....+. +|...|++++|+|++. +|++|+.||.|++||
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd 288 (357)
T 3i2n_A 246 PTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWK 288 (357)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred cccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEee
Confidence 655544 8999999999999998 899999999999996
No 102
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=7.3e-35 Score=263.85 Aligned_cols=248 Identities=23% Similarity=0.334 Sum_probs=207.8
Q ss_pred EEeeCCCCcEEEEEECCC-CCEEEEEeCCCeEEEEEccCCC------CceEEEEeecCCCcceEEEEEcCCC--eEEEEe
Q psy15421 91 HAIPLRSSWVMTCAYAPS-GSFVACGGLDNICSIYSLKTRE------GNVRVSRELPGHTGYLSCCRFLDDN--QIVTSS 161 (340)
Q Consensus 91 ~~~~~~~~~i~~v~~~~~-~~~l~~~~~d~~v~i~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~ 161 (340)
.....|...|.+++|+|+ +.++++++.++.|++|++.... +.......+.+|...+.++.|.+.+ .|++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 344567889999999997 7899999999999999997521 1123445667899999999998653 688999
Q ss_pred CCCeEEEEECCCCce-------EEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCC---eeeeEecCCCCCeE
Q psy15421 162 GDMSCALWDIETGQQ-------CASFIGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDG---SCKQTFPGHESDIN 230 (340)
Q Consensus 162 ~d~~v~iwd~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~~~sg~~dg~i~~wd~~~~---~~~~~~~~h~~~v~ 230 (340)
.|+.|++||+..+.. ...+.+|...|.+++|+| ++.++++++.||.|++||++++ .....+..|...|+
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 999999999987322 345668999999999999 6788999999999999999987 46677889999999
Q ss_pred EEEEecCCC-EEEEEeCCCcEEEEeCcC-CcEEEEeecCCcccceEEEEEcCCCc-EEEEEeCCCcEEEEeCCC------
Q psy15421 231 AVTFFPNGW-AFATGSDDATCRLFDIRA-DQELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMK------ 301 (340)
Q Consensus 231 ~v~~~~~~~-~l~s~s~d~~i~iwd~~~-~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~g~~d~~i~iw~~~~------ 301 (340)
+++|+|++. .+++|+.||.|++||++. .+++..+.. +...|.+++|+|+++ +|++++.|+.|++|++..
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~--h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 359 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES--HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 359 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC--CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCC
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec--CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccC
Confidence 999999887 699999999999999987 444444432 234699999999985 799999999999999876
Q ss_pred --------ceeeeeeccCCcceEEEEECCCCC-EEEEeeCCCcEEecC
Q psy15421 302 --------TERAGILAGHDNRVSCLGVTEDGM-AVATGSWDSFLRIWN 340 (340)
Q Consensus 302 --------~~~~~~~~~h~~~i~~~~~s~d~~-~l~s~s~D~~i~iW~ 340 (340)
.+.+..+.+|...|++++|+|++. +|++++.|+.|+||+
T Consensus 360 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 360 TEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407 (430)
T ss_dssp HHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred ccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeE
Confidence 255677789999999999999999 899999999999995
No 103
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-34 Score=246.47 Aligned_cols=246 Identities=20% Similarity=0.310 Sum_probs=211.4
Q ss_pred EEeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCC---CeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEE
Q psy15421 46 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTT---NKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICS 122 (340)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~---~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~ 122 (340)
.....+.+|...|.+++|+|++++|++++.|+.|++|++... +....+..|...|.++.| ++.++++++.|+.++
T Consensus 50 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~ 127 (313)
T 3odt_A 50 WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAK 127 (313)
T ss_dssp EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEE
T ss_pred EEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEE
Confidence 445678899999999999999999999999999999998754 456677889999999999 688999999999999
Q ss_pred EEEccCCCCceEEEEeecCCCcceEEEEEcC--CCeEEEEeCCCeEEEEECCCCceEEEEec-CCCCeEEEEEcCCCCEE
Q psy15421 123 IYSLKTREGNVRVSRELPGHTGYLSCCRFLD--DNQIVTSSGDMSCALWDIETGQQCASFIG-HTGDVMSLSLAPDMRTF 199 (340)
Q Consensus 123 i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~ 199 (340)
+|+. . .....+..|...+.++.+.+ ++.+++++.|+.|++|| ..+....+.. |...+.+++|+|++. +
T Consensus 128 ~~d~--~----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~ 198 (313)
T 3odt_A 128 VWKE--G----SLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-F 198 (313)
T ss_dssp EEET--T----EEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-E
T ss_pred EEcC--C----cEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-E
Confidence 9992 1 23455667889998888754 56899999999999999 4456666766 889999999999988 8
Q ss_pred EEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEc
Q psy15421 200 VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS 279 (340)
Q Consensus 200 ~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s 279 (340)
++++.||.|++||+++++.+..+++|..+|.+++|+|++ .+++++.||.|++||+++.+.+..+... ...|.+++|+
T Consensus 199 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~--~~~i~~~~~~ 275 (313)
T 3odt_A 199 ISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLP--AISIWSVDCM 275 (313)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECS--SSCEEEEEEC
T ss_pred EEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEecc--CceEEEEEEc
Confidence 999999999999999999999999999999999999999 6999999999999999988877766433 2469999999
Q ss_pred CCCcEEEEEeCCCcEEEEeCCCceeee
Q psy15421 280 RSGRLLLAGYDDFNCNVWDSMKTERAG 306 (340)
Q Consensus 280 ~~~~~l~~g~~d~~i~iw~~~~~~~~~ 306 (340)
|+++ +++++.|+.|++|+..+.+...
T Consensus 276 ~~~~-~~~~~~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 276 SNGD-IIVGSSDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp TTSC-EEEEETTSCEEEEESCGGGCCC
T ss_pred cCCC-EEEEeCCCcEEEEeCCCCceee
Confidence 9998 5679999999999988766544
No 104
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.7e-34 Score=261.80 Aligned_cols=261 Identities=21% Similarity=0.413 Sum_probs=210.5
Q ss_pred EEeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Q psy15421 46 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYS 125 (340)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~ 125 (340)
+..+.+.+|.+.|.+++| +++.|++|+.||+|++||+.+++.+..+..|...|.+++|+ +.++++|+.|+.|++|+
T Consensus 164 ~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd 239 (435)
T 1p22_A 164 ECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWD 239 (435)
T ss_dssp CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEE
T ss_pred eEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEe
Confidence 456788999999999998 78899999999999999999999999999999999999997 45999999999999999
Q ss_pred ccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCC
Q psy15421 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACD 205 (340)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~d 205 (340)
+..+.. ......+.+|...+.++.+ +++.+++++.|+.|++||+++++.+..+.+|...+.+++++ +.++++|+.|
T Consensus 240 ~~~~~~-~~~~~~~~~~~~~v~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~d 315 (435)
T 1p22_A 240 MASPTD-ITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSD 315 (435)
T ss_dssp CSSSSC-CEEEEEECCCSSCEEEEEE-ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETT
T ss_pred CCCCCC-ceeeeEecCCCCcEEEEEe-CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCC
Confidence 986543 2334567789999999988 56789999999999999999999999999999999999984 6799999999
Q ss_pred CcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCc---------EEEEeecCCcccceEEE
Q psy15421 206 ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ---------ELAMYSHDNIICGITSV 276 (340)
Q Consensus 206 g~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~---------~~~~~~~~~~~~~i~~~ 276 (340)
|.|++||+++++++..+.+|...|.+++| ++.++++|+.||.|++||+.... .+..+. .+...|.++
T Consensus 316 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l 391 (435)
T 1p22_A 316 NTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV--EHSGRVFRL 391 (435)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEEC--CCSSCCCCE
T ss_pred CeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeecc--CCCCCeEEE
Confidence 99999999999999999999999999998 68899999999999999987544 444332 333468889
Q ss_pred EEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEEC
Q psy15421 277 AFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVT 321 (340)
Q Consensus 277 ~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s 321 (340)
+| ++++|++|+.||.|++||..+........ ...+..++.|.
T Consensus 392 ~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~ 433 (435)
T 1p22_A 392 QF--DEFQIVSSSHDDTILIWDFLNDPAAQAEP-PRSPSRTYTYI 433 (435)
T ss_dssp EE--CSSCEEECCSSSEEEEEC-----------------------
T ss_pred Ee--CCCEEEEEeCCCEEEEEECCCCCCcccCC-CCCCccceeee
Confidence 99 78899999999999999987765443332 22344444443
No 105
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.4e-35 Score=258.18 Aligned_cols=242 Identities=13% Similarity=0.145 Sum_probs=205.3
Q ss_pred eeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCC-C-eEEEEeCCCeEEEEE
Q psy15421 93 IPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD-N-QIVTSSGDMSCALWD 170 (340)
Q Consensus 93 ~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~-~l~~~~~d~~v~iwd 170 (340)
...|...|.+++|+|++.+|++++.|+.|++|++..+..... .....+|...+.++.|.++ . .+++++.|+.|++||
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVD-LLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEE-EEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcccc-ceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEE
Confidence 357889999999999999999999999999999987653322 2344578999999999865 5 588999999999999
Q ss_pred C-CCCceEEEEec--CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC---------CeeeeEecCCCCCeEEEEEecCC
Q psy15421 171 I-ETGQQCASFIG--HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD---------GSCKQTFPGHESDINAVTFFPNG 238 (340)
Q Consensus 171 ~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~---------~~~~~~~~~h~~~v~~v~~~~~~ 238 (340)
+ .+++. ..+.+ |...|.+++|+| +..+++++.|+.|++||+++ ++++..+. |...|.+++|+|++
T Consensus 86 ~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~ 162 (342)
T 1yfq_A 86 LIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR 162 (342)
T ss_dssp SSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE
T ss_pred eccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc
Confidence 9 87654 67778 999999999999 99999999999999999987 66666666 88999999999987
Q ss_pred CEEEEEeCCCcEEEEeCcC-CcEEEEeecCCcccceEEEEEcC-CCcEEEEEeCCCcEEEEeCCCc------eeeeeecc
Q psy15421 239 WAFATGSDDATCRLFDIRA-DQELAMYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNVWDSMKT------ERAGILAG 310 (340)
Q Consensus 239 ~~l~s~s~d~~i~iwd~~~-~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~g~~d~~i~iw~~~~~------~~~~~~~~ 310 (340)
+++++.|+.|++||++. ...........+...+.+++|+| +++++++|+.|+.+++|+.... +....+..
T Consensus 163 --l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~ 240 (342)
T 1yfq_A 163 --LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRC 240 (342)
T ss_dssp --EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEEC
T ss_pred --EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeec
Confidence 99999999999999987 44322112223344699999999 9999999999999999998766 66677777
Q ss_pred CCc---------ceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 311 HDN---------RVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 311 h~~---------~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
|.. .|++++|+|++.+|++|+.||.|++||
T Consensus 241 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd 279 (342)
T 1yfq_A 241 HRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWN 279 (342)
T ss_dssp CCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred ccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEc
Confidence 765 999999999999999999999999996
No 106
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=7.9e-35 Score=263.62 Aligned_cols=251 Identities=15% Similarity=0.278 Sum_probs=213.6
Q ss_pred EEecCccCcEEEEEEcCC-CCeEEEEeCCCeEEEEeCCC----------CCeeEEeeCCCCcEEEEEECCCCC-EEEEEe
Q psy15421 49 RTLRGHLAKIYAMHWGSD-SRNLVSASQDGKLIVWDSYT----------TNKVHAIPLRSSWVMTCAYAPSGS-FVACGG 116 (340)
Q Consensus 49 ~~~~~h~~~v~~~~~s~~-~~~l~s~~~d~~i~iwd~~~----------~~~~~~~~~~~~~i~~v~~~~~~~-~l~~~~ 116 (340)
..+.+|.+.|++++|+|+ +.+|++++.||.|++||+.+ .+.+..+..|...+.+++|+|++. +|++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 345689999999999997 67899999999999999876 566778889999999999999988 999999
Q ss_pred CCCeEEEEEccCCCCc---eEEEEeecCCCcceEEEEEcC-C-CeEEEEeCCCeEEEEECCCC---ceEEEEecCCCCeE
Q psy15421 117 LDNICSIYSLKTREGN---VRVSRELPGHTGYLSCCRFLD-D-NQIVTSSGDMSCALWDIETG---QQCASFIGHTGDVM 188 (340)
Q Consensus 117 ~d~~v~i~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~-~-~~l~~~~~d~~v~iwd~~~~---~~~~~~~~~~~~v~ 188 (340)
.|+.|++|++...... ......+.+|...+.++.|.+ + ..+++++.|+.|++||++++ +....+..|...+.
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 9999999999864321 122345668999999999986 3 46888999999999999987 46677788999999
Q ss_pred EEEEcCCCC-EEEEEeCCCcEEEEECCC-CeeeeEecCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEeCcCC-------
Q psy15421 189 SLSLAPDMR-TFVSGACDASAKLWDIRD-GSCKQTFPGHESDINAVTFFPNGW-AFATGSDDATCRLFDIRAD------- 258 (340)
Q Consensus 189 ~~~~~~~~~-~~~sg~~dg~i~~wd~~~-~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~------- 258 (340)
+++|+|++. ++++|+.||.|++||+++ +..+..+.+|...|.+++|+|++. .|++++.|+.|++||+...
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 361 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 361 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHH
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCcc
Confidence 999999987 688999999999999998 566788889999999999999985 7999999999999999862
Q ss_pred -------cEEEEeecCCcccceEEEEEcCCCc-EEEEEeCCCcEEEEeCCC
Q psy15421 259 -------QELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMK 301 (340)
Q Consensus 259 -------~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~g~~d~~i~iw~~~~ 301 (340)
+.+. .+..+...|.+++|+|+++ +|++++.|+.|++|+...
T Consensus 362 ~~~~~~~~~~~--~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 362 DAEDGPPELLF--IHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp HHHHCCTTEEE--ECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred ccccCCcceEE--EcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 2222 2334445699999999999 999999999999999653
No 107
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=9.3e-36 Score=266.58 Aligned_cols=279 Identities=13% Similarity=0.179 Sum_probs=198.6
Q ss_pred EEEEEE---cCCCCeEEEEeCCCeEEEEeCCCCC----------eeEEee-------------------CCCCcEEEEEE
Q psy15421 58 IYAMHW---GSDSRNLVSASQDGKLIVWDSYTTN----------KVHAIP-------------------LRSSWVMTCAY 105 (340)
Q Consensus 58 v~~~~~---s~~~~~l~s~~~d~~i~iwd~~~~~----------~~~~~~-------------------~~~~~i~~v~~ 105 (340)
-+++.| +++...+++++.|+.|++|+..... .+.... .|........+
T Consensus 18 p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (393)
T 4gq1_A 18 PYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNVNSS 97 (393)
T ss_dssp EEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC----------C
T ss_pred CeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCcceeec
Confidence 345556 4555667777788899999753211 011111 11122223344
Q ss_pred CCCCCEEEEEeCCCeEEEEEccCCCCce-EEEEeecCCCcceEEEEEcC---------CCeEEEEeCCCeEEEEECCCCc
Q psy15421 106 APSGSFVACGGLDNICSIYSLKTREGNV-RVSRELPGHTGYLSCCRFLD---------DNQIVTSSGDMSCALWDIETGQ 175 (340)
Q Consensus 106 ~~~~~~l~~~~~d~~v~i~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~---------~~~l~~~~~d~~v~iwd~~~~~ 175 (340)
++++.++++++.|++|++|+...++... .....+.+|...|.++.|.+ +..|++++.|++|++||+.++.
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~ 177 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG 177 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc
Confidence 5567789999999999999998654221 23345679999999999964 3468899999999999999988
Q ss_pred eEEEEecCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCeeeeE-------------------------ecCCCCCe
Q psy15421 176 QCASFIGHTGDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQT-------------------------FPGHESDI 229 (340)
Q Consensus 176 ~~~~~~~~~~~v~~~~~~~~~~-~~~sg~~dg~i~~wd~~~~~~~~~-------------------------~~~h~~~v 229 (340)
.+..+..|...+.+++|+|++. ++++|+.||+|++||+++++.... ..+|...+
T Consensus 178 ~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v 257 (393)
T 4gq1_A 178 PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSL 257 (393)
T ss_dssp EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSC
T ss_pred eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccc
Confidence 8888889999999999999875 799999999999999987754321 13577788
Q ss_pred EEEEEe-cCCCEEEEEeCCCcEEEEeCcCCcEEEEeec-CC---------------cccceEEEEEcC--CCcEEEEEeC
Q psy15421 230 NAVTFF-PNGWAFATGSDDATCRLFDIRADQELAMYSH-DN---------------IICGITSVAFSR--SGRLLLAGYD 290 (340)
Q Consensus 230 ~~v~~~-~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-~~---------------~~~~i~~~~~s~--~~~~l~~g~~ 290 (340)
.++.|+ |++..+++++.|+.+++||+...+....+.. .. .........|+| ++.++++|+.
T Consensus 258 ~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~ 337 (393)
T 4gq1_A 258 ANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQ 337 (393)
T ss_dssp SEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETT
T ss_pred eeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECC
Confidence 899987 7999999999999999999876543322210 00 000112234444 4557788899
Q ss_pred CCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcE
Q psy15421 291 DFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL 336 (340)
Q Consensus 291 d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i 336 (340)
|++|++||..+++....+.+|..+|.+++|||||++||+++.||.+
T Consensus 338 Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~ 383 (393)
T 4gq1_A 338 HGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVL 383 (393)
T ss_dssp TTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEE
T ss_pred CCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 9999999999998888888999999999999999999999988764
No 108
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-35 Score=281.59 Aligned_cols=248 Identities=16% Similarity=0.247 Sum_probs=209.0
Q ss_pred EEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcC---CCeEEEEeCCCeEE
Q psy15421 91 HAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD---DNQIVTSSGDMSCA 167 (340)
Q Consensus 91 ~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~l~~~~~d~~v~ 167 (340)
..+.+|...|.+++|+|+++++++|+.|+.|++|++..+ .......+.+|...|.++.|.+ +..+++++.||.|+
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~--~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~ 80 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE--THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 80 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETT--EEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCC--CCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEE
Confidence 356789999999999999999999999999999998743 2345567789999999999964 45789999999999
Q ss_pred EEECCCCc--eEEEEecCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCe--eeeEecCCCCCeEEEEEec-----
Q psy15421 168 LWDIETGQ--QCASFIGHTGDVMSLSLAPD--MRTFVSGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFP----- 236 (340)
Q Consensus 168 iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~sg~~dg~i~~wd~~~~~--~~~~~~~h~~~v~~v~~~~----- 236 (340)
+||+.+++ ....+.+|...|.+++|+|+ +..+++|+.||.|++||++++. ....+.+|...|.+++|+|
T Consensus 81 vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (753)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---
T ss_pred EEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccc
Confidence 99999886 66777889999999999999 9999999999999999998873 3456678999999999999
Q ss_pred --------CCCEEEEEeCCCcEEEEeCcCCcEEE--EeecCCcccceEEEEEcCC---CcEEEEEeCCCcEEEEeCCCce
Q psy15421 237 --------NGWAFATGSDDATCRLFDIRADQELA--MYSHDNIICGITSVAFSRS---GRLLLAGYDDFNCNVWDSMKTE 303 (340)
Q Consensus 237 --------~~~~l~s~s~d~~i~iwd~~~~~~~~--~~~~~~~~~~i~~~~~s~~---~~~l~~g~~d~~i~iw~~~~~~ 303 (340)
++.++++|+.||.|++||++...... ......+...|++++|+|+ +++|++|+.||.|++||..+++
T Consensus 161 ~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp ------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred ccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 58999999999999999998763221 1112334457999999999 9999999999999999987753
Q ss_pred -----eeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 304 -----RAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 304 -----~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
......+|.+.|++++|+|+|.+|++|+.||.|++||
T Consensus 241 ~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd 282 (753)
T 3jro_A 241 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 282 (753)
T ss_dssp SCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCB
T ss_pred CcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEe
Confidence 3344556899999999999999999999999999996
No 109
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.2e-33 Score=255.52 Aligned_cols=283 Identities=11% Similarity=0.087 Sum_probs=232.4
Q ss_pred EeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeE-----EeeCCCCcEEEEEECCCCCEEEEEeCCCeE
Q psy15421 47 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVH-----AIPLRSSWVMTCAYAPSGSFVACGGLDNIC 121 (340)
Q Consensus 47 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~-----~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v 121 (340)
....+..+. .+.+++|+|++.++++++.|+.|++||..+++... .+..|...+.+++|+|++.++++++.|+.+
T Consensus 115 ~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v 193 (433)
T 3bws_A 115 FISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAV 193 (433)
T ss_dssp EEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEE
T ss_pred EEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEE
Confidence 334455543 45699999977788888889999999999988776 344778899999999999999999999999
Q ss_pred EEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEE-EEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEE
Q psy15421 122 SIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIV-TSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTF 199 (340)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~-~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 199 (340)
++|++.++. ....+..|...+.++.|.+++ .++ +++.|+.|.+||+++++....+..+ ..+.+++|+|+++.+
T Consensus 194 ~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l 268 (433)
T 3bws_A 194 HVFDLKTLA----YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKEL 268 (433)
T ss_dssp EEEETTTCC----EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEE
T ss_pred EEEECCCce----EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEE
Confidence 999987643 334556788889999998765 453 4457999999999998877666543 458999999999999
Q ss_pred EEEe--------CCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEeCcCCcEEEEeecCCcc
Q psy15421 200 VSGA--------CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW-AFATGSDDATCRLFDIRADQELAMYSHDNII 270 (340)
Q Consensus 200 ~sg~--------~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~ 270 (340)
++++ .||.|++||+++++....+ .|...+.+++|+|+++ .+++++.|+.|++||+.+.+.+..+.+.
T Consensus 269 ~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~--- 344 (433)
T 3bws_A 269 YIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVF--- 344 (433)
T ss_dssp EEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECS---
T ss_pred EEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCC---
Confidence 8887 5899999999998876665 3566889999999996 4577789999999999988777666533
Q ss_pred cceEEEEEcCCCcEEEEEeC---------------CCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeC-CC
Q psy15421 271 CGITSVAFSRSGRLLLAGYD---------------DFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW-DS 334 (340)
Q Consensus 271 ~~i~~~~~s~~~~~l~~g~~---------------d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~-D~ 334 (340)
..+.+++|+|++++|++++. ||.|++||..+++.+..+.. ...+.+++|+|||++|++++. |+
T Consensus 345 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~ 423 (433)
T 3bws_A 345 DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDH 423 (433)
T ss_dssp SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTT
T ss_pred CCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCC
Confidence 35889999999999988876 57999999999988887765 467899999999999988775 99
Q ss_pred cEEecC
Q psy15421 335 FLRIWN 340 (340)
Q Consensus 335 ~i~iW~ 340 (340)
.|++|+
T Consensus 424 ~i~v~~ 429 (433)
T 3bws_A 424 QIRVYR 429 (433)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 999996
No 110
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-35 Score=268.55 Aligned_cols=250 Identities=8% Similarity=0.104 Sum_probs=207.1
Q ss_pred CccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCC-----cEEEEEECCCCCEEEEEeCCCeEEEEEcc
Q psy15421 53 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSS-----WVMTCAYAPSGSFVACGGLDNICSIYSLK 127 (340)
Q Consensus 53 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-----~i~~v~~~~~~~~l~~~~~d~~v~i~~~~ 127 (340)
+|.+.|.+++|+|+|.+||+++.||+|+|||... .+..+. |.. .+.+++|+|+|++||+|+.||+|++|++.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 6688899999999999999999999999999544 555555 554 49999999999999999999999999997
Q ss_pred CCCC---ceEEEEee----cCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCce---EEEEe-cCCCCeEEEEEcCCC
Q psy15421 128 TREG---NVRVSREL----PGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQ---CASFI-GHTGDVMSLSLAPDM 196 (340)
Q Consensus 128 ~~~~---~~~~~~~~----~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~---~~~~~-~~~~~v~~~~~~~~~ 196 (340)
.+.. ......++ .+|...|.++.|++++ +++++.|++|++||+..++. ...+. +|...|.+++|+ +
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g 236 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--D 236 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--T
T ss_pred CCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--C
Confidence 6532 11123444 6788899999999998 99999999999999988773 34563 788899999999 5
Q ss_pred CEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEE--ecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceE
Q psy15421 197 RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTF--FPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGIT 274 (340)
Q Consensus 197 ~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~--~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~ 274 (340)
+.+++++ +++|++||+..++......+|...+..++| +|++..+++++.||. ++|...
T Consensus 237 ~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d------------------ 296 (588)
T 2j04_A 237 YKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED------------------ 296 (588)
T ss_dssp TEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS------------------
T ss_pred CEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec------------------
Confidence 7888886 799999999988764333389999999999 999999999999999 999876
Q ss_pred EEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeC
Q psy15421 275 SVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW 332 (340)
Q Consensus 275 ~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~ 332 (340)
.+.|+|++.++++. |+++++|+.... .+..+.+ ...|++++|||||+.+|+++.
T Consensus 297 ~~~~spd~~l~a~~--d~~v~lW~~~g~-~l~~~~~-~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 297 ELHVTADNIIAPYL--EKKFKKWSTIWN-EFNNYET-TLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp SEEEECCCSSHHHH--HHHHHHTTTTTT-SSSSSCC-EEEEEEEEECTTSSEEEEEEE
T ss_pred cEEECCCceEEEEc--CCEEEEEECCCC-ceeeecc-ceEEEEEEECCCCCEEEEEEe
Confidence 14589999888775 999999986433 3445544 677999999999999998874
No 111
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.4e-34 Score=253.81 Aligned_cols=244 Identities=12% Similarity=0.094 Sum_probs=192.2
Q ss_pred EEecCccCcEEEEEEcCCCCeEEEE-----------eCCCeEEEEeCCCCCee-E---Ee-----eCCCCcEEEEEECCC
Q psy15421 49 RTLRGHLAKIYAMHWGSDSRNLVSA-----------SQDGKLIVWDSYTTNKV-H---AI-----PLRSSWVMTCAYAPS 108 (340)
Q Consensus 49 ~~~~~h~~~v~~~~~s~~~~~l~s~-----------~~d~~i~iwd~~~~~~~-~---~~-----~~~~~~i~~v~~~~~ 108 (340)
..|.+|.+.|.+++++ ++.+++| +.|+++++|++.+.+.. . .. ..+...+.+++|+||
T Consensus 67 ~~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpD 144 (365)
T 4h5i_A 67 FALEDNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISRE 144 (365)
T ss_dssp EECCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTT
T ss_pred EEccCCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCC
Confidence 4678999999988765 4456555 45788999987654321 1 11 123456889999999
Q ss_pred CCEEEEE--eCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEE--EecCC
Q psy15421 109 GSFVACG--GLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCAS--FIGHT 184 (340)
Q Consensus 109 ~~~l~~~--~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~--~~~~~ 184 (340)
|++++++ +.|++|++||+.++. ....+ .|...|.++.|++++.+++.+.++.+.+|+..+++.... ...|.
T Consensus 145 g~~la~as~~~d~~i~iwd~~~~~----~~~~~-~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~ 219 (365)
T 4h5i_A 145 GTVAAIASSKVPAIMRIIDPSDLT----EKFEI-ETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKN 219 (365)
T ss_dssp SSCEEEEESCSSCEEEEEETTTTE----EEEEE-ECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTT
T ss_pred CCEEEEEECCCCCEEEEeECCCCc----EEEEe-CCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCC
Confidence 9998654 478999999997653 22333 367789999999888766666677788888877776543 34588
Q ss_pred CCeEEEEEcCCCCEEEEEeCCC----cEEEEECCCCee----eeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCc
Q psy15421 185 GDVMSLSLAPDMRTFVSGACDA----SAKLWDIRDGSC----KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR 256 (340)
Q Consensus 185 ~~v~~~~~~~~~~~~~sg~~dg----~i~~wd~~~~~~----~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 256 (340)
..+.+++|+|+++.+++++.|+ .+++|++..... ...+.+|..+|++++|+|+|++||+|+.|++|+|||+.
T Consensus 220 ~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~ 299 (365)
T 4h5i_A 220 WSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLK 299 (365)
T ss_dssp EEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred CCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECC
Confidence 8899999999999999999887 688899876653 34567899999999999999999999999999999999
Q ss_pred CCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCC
Q psy15421 257 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 300 (340)
Q Consensus 257 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~ 300 (340)
+++++..+. ..+...|++++|+|||++||+|+.|++|+||++.
T Consensus 300 ~~~~~~~~~-~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 300 DLSMSKIFK-QAHSFAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp TTEEEEEET-TSSSSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred CCcEEEEec-CcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 988876542 2344579999999999999999999999999974
No 112
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.7e-34 Score=256.86 Aligned_cols=250 Identities=17% Similarity=0.241 Sum_probs=209.3
Q ss_pred EEecCccCcEEEEEEcC-CCCeEEEEeCCCeEEEEeCCCC-------CeeEEeeCCCCcEEEEEECCCC-CEEEEEeCCC
Q psy15421 49 RTLRGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSYTT-------NKVHAIPLRSSWVMTCAYAPSG-SFVACGGLDN 119 (340)
Q Consensus 49 ~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~i~iwd~~~~-------~~~~~~~~~~~~i~~v~~~~~~-~~l~~~~~d~ 119 (340)
..+.+|.+.|++++|+| ++++|++|+.||+|++||+.++ +.+..+..|...|.+++|+|++ .+|++++.|+
T Consensus 75 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 154 (402)
T 2aq5_A 75 PLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN 154 (402)
T ss_dssp CCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS
T ss_pred ceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC
Confidence 45789999999999999 8999999999999999999887 5677888999999999999998 7999999999
Q ss_pred eEEEEEccCCCCceEEEEee--cCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEEEE-ecCCCC-eEEEEEcC
Q psy15421 120 ICSIYSLKTREGNVRVSREL--PGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCASF-IGHTGD-VMSLSLAP 194 (340)
Q Consensus 120 ~v~i~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~~~-v~~~~~~~ 194 (340)
.|++||+.++. ....+ .+|...+.++.|++++ .|++++.|+.|++||+++++.+..+ ..|.+. +.+++|+|
T Consensus 155 ~i~iwd~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (402)
T 2aq5_A 155 VILVWDVGTGA----AVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVS 230 (402)
T ss_dssp CEEEEETTTTE----EEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECS
T ss_pred EEEEEECCCCC----ccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcC
Confidence 99999997653 34455 7899999999998764 6889999999999999999988888 678776 89999999
Q ss_pred CCCEEEEE---eCCCcEEEEECCCCee-eeEe-cCCCCCeEEEEEecCCCEEE-EEeCCCcEEEEeCcCCcE-EEEeecC
Q psy15421 195 DMRTFVSG---ACDASAKLWDIRDGSC-KQTF-PGHESDINAVTFFPNGWAFA-TGSDDATCRLFDIRADQE-LAMYSHD 267 (340)
Q Consensus 195 ~~~~~~sg---~~dg~i~~wd~~~~~~-~~~~-~~h~~~v~~v~~~~~~~~l~-s~s~d~~i~iwd~~~~~~-~~~~~~~ 267 (340)
++.++++| +.|+.|++||++++.. .... ..|...+.+++|+|++.+++ +|+.|+.|++||+.+.++ +..+...
T Consensus 231 ~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~ 310 (402)
T 2aq5_A 231 EGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMF 310 (402)
T ss_dssp TTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEE
T ss_pred CCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeeccc
Confidence 99999999 7999999999988654 2222 24677899999999999886 455799999999997763 3333222
Q ss_pred CcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCcee
Q psy15421 268 NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER 304 (340)
Q Consensus 268 ~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~ 304 (340)
.....+.+++|+|++.++++ .++.+++|++.+...
T Consensus 311 ~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 311 SSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp CCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred ccCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 23356899999999998875 566899999876543
No 113
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=9.8e-33 Score=239.01 Aligned_cols=246 Identities=15% Similarity=0.302 Sum_probs=206.4
Q ss_pred EecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCC
Q psy15421 50 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTR 129 (340)
Q Consensus 50 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~ 129 (340)
.+.+|...|.+++|+|++++|++|+.||+|++||+.+++.+..+..|...+.++ ++++.++++++.++.+++|+....
T Consensus 62 ~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~--~~~~~~l~s~~~~~~~~~~~~~~~ 139 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSL--SWNSYILSSGSRSGHIHHHDVRVA 139 (318)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE--EEETTEEEEEETTSEEEEEETTSS
T ss_pred EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEe--ecCCCEEEEEecCCceEeeecCCC
Confidence 345788999999999999999999999999999999999999999998877664 556789999999999999998664
Q ss_pred CCceEEEEeecCCCcceEEEEEcCC-CeEEEEeCCCeEEEEECCCCce----EEEEecCCCCeEEEEEcCCCCEE---EE
Q psy15421 130 EGNVRVSRELPGHTGYLSCCRFLDD-NQIVTSSGDMSCALWDIETGQQ----CASFIGHTGDVMSLSLAPDMRTF---VS 201 (340)
Q Consensus 130 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~---~s 201 (340)
.. ....+.+|...+..+.+.+. ..+++++.|+.|++||+++++. ......+.+.+.+++++|++..+ ++
T Consensus 140 ~~---~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 216 (318)
T 4ggc_A 140 EH---HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGG 216 (318)
T ss_dssp SC---EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEE
T ss_pred ce---eEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEe
Confidence 42 34556789999998888765 4688999999999999987653 34556688889999999977643 36
Q ss_pred EeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEe--CCCcEEEEeCcCCcEEEEeecCCcccceEEEEEc
Q psy15421 202 GACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS--DDATCRLFDIRADQELAMYSHDNIICGITSVAFS 279 (340)
Q Consensus 202 g~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s--~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s 279 (340)
++.+++|++||.+......... +...+..+.|+|++..+++++ .|+.|++||+.+++++..+. .+...|++++|+
T Consensus 217 ~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~--gH~~~V~~l~~s 293 (318)
T 4ggc_A 217 GTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK--GHTSRVLSLTMS 293 (318)
T ss_dssp CTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC--CCSSCEEEEEEC
T ss_pred cCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEc--CCCCCEEEEEEc
Confidence 7789999999999887665554 667899999999998887655 79999999999988887764 334579999999
Q ss_pred CCCcEEEEEeCCCcEEEEeCCCce
Q psy15421 280 RSGRLLLAGYDDFNCNVWDSMKTE 303 (340)
Q Consensus 280 ~~~~~l~~g~~d~~i~iw~~~~~~ 303 (340)
|++++|++|+.|++|++||+.+.+
T Consensus 294 pdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 294 PDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp TTSSCEEEEETTTEEEEECCSCCC
T ss_pred CCCCEEEEEecCCeEEEEECCCCC
Confidence 999999999999999999986543
No 114
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.1e-34 Score=260.05 Aligned_cols=248 Identities=17% Similarity=0.119 Sum_probs=194.8
Q ss_pred eEEeeCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcC--CCeEEEEeCCCeE
Q psy15421 90 VHAIPLRSSWVMTCAYAP-SGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD--DNQIVTSSGDMSC 166 (340)
Q Consensus 90 ~~~~~~~~~~i~~v~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~~~~~d~~v 166 (340)
......|...|++++|+| ++++||+|+.||.|+|||+..++.. ....+.+|...|.++.|++ ++.|++++.|++|
T Consensus 112 ~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~--~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v 189 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP--TFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTT 189 (435)
T ss_dssp CCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC--EEECCCSSSCCCCEEEECSSCTTEEEEECSSSCE
T ss_pred cccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce--eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEE
Confidence 345567788899999999 5779999999999999999765433 2345678999999999975 4579999999999
Q ss_pred EEEECCCCceEEEEec--CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCC-EEEE
Q psy15421 167 ALWDIETGQQCASFIG--HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW-AFAT 243 (340)
Q Consensus 167 ~iwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s 243 (340)
++||++++........ +...+.+++|+|+++++++|+.||.|++||++. +.+..+.+|...|++++|+|++. ++++
T Consensus 190 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 190 RLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLAT 268 (435)
T ss_dssp EEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEE
T ss_pred EEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEE
Confidence 9999987543332222 334578999999999999999999999999864 55678889999999999999875 7889
Q ss_pred EeCCCcEEEEeCcCCcEEEEe-ecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCc------ceE
Q psy15421 244 GSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDN------RVS 316 (340)
Q Consensus 244 ~s~d~~i~iwd~~~~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~------~i~ 316 (340)
|+.|+.|++||++..+....+ ....+...|++++|+|++++|++|+.|+.|++|+..+++....+.+|.. .+.
T Consensus 269 ~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 348 (435)
T 4e54_B 269 ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPI 348 (435)
T ss_dssp EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCC
T ss_pred ecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeE
Confidence 999999999999865443222 1123345699999999999999999999999999998887776666643 123
Q ss_pred EEEECCCCCEEEEee------------CCCcEEecC
Q psy15421 317 CLGVTEDGMAVATGS------------WDSFLRIWN 340 (340)
Q Consensus 317 ~~~~s~d~~~l~s~s------------~D~~i~iW~ 340 (340)
.+.|+|++.++++++ .+++|++||
T Consensus 349 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd 384 (435)
T 4e54_B 349 KAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFD 384 (435)
T ss_dssp BCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEEC
T ss_pred EEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEE
Confidence 345666666655543 346799996
No 115
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=2.7e-32 Score=243.46 Aligned_cols=261 Identities=15% Similarity=0.184 Sum_probs=216.5
Q ss_pred CeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEE-EEEeCCCeEEEEEccCCCCceEEEEeecCCCcce
Q psy15421 68 RNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFV-ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYL 146 (340)
Q Consensus 68 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l-~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v 146 (340)
..+++++.|+.|++||+.+++.+..+..|.. +.+++|+|+++++ ++++.|+.|++|++.+++ ....+..+. .+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~----~~~~~~~~~-~v 76 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNN----VIATVPAGS-SP 76 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTE----EEEEEECSS-SE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCe----EEEEEECCC-Cc
Confidence 3678899999999999999988888887754 8999999999987 667799999999987653 233344444 78
Q ss_pred EEEEEcCCCe-EE-EEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCeeeeEec
Q psy15421 147 SCCRFLDDNQ-IV-TSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTFP 223 (340)
Q Consensus 147 ~~~~~~~~~~-l~-~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~sg~~dg~i~~wd~~~~~~~~~~~ 223 (340)
.++.|++++. ++ ++..++.|.+||+.+++....+..+ ..+.+++|+|+++.+ ++++.|+.|++||+++++....+.
T Consensus 77 ~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 155 (391)
T 1l0q_A 77 QGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS 155 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred cceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEe
Confidence 8888987654 54 4456799999999999887776644 568999999999977 688889999999999999888887
Q ss_pred CCCCCeEEEEEecCCCEE-EEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEe---CCCcEEEEeC
Q psy15421 224 GHESDINAVTFFPNGWAF-ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY---DDFNCNVWDS 299 (340)
Q Consensus 224 ~h~~~v~~v~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~---~d~~i~iw~~ 299 (340)
.+ ..+.+++|+|+++++ ++++.|+.|++||+++.+....+.+.. .+.+++|+|++++|++++ .++.|++||.
T Consensus 156 ~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 156 VG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA---APSGIAVNPEGTKAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp CC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS---EEEEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred cC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCC---CccceEECCCCCEEEEEecCcCCCcEEEEEC
Confidence 65 457999999999877 677889999999999887776665433 478999999999999888 6899999999
Q ss_pred CCceeeeeeccCCcceEEEEECCCCCEE-EEeeCCCcEEecC
Q psy15421 300 MKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSFLRIWN 340 (340)
Q Consensus 300 ~~~~~~~~~~~h~~~i~~~~~s~d~~~l-~s~s~D~~i~iW~ 340 (340)
.+++.+..+..|. .+.+++|+|+|++| ++++.|+.|++||
T Consensus 232 ~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d 272 (391)
T 1l0q_A 232 GTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVID 272 (391)
T ss_dssp TTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEE
Confidence 9998888887765 57899999999877 6788999999996
No 116
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=6.2e-33 Score=248.27 Aligned_cols=279 Identities=18% Similarity=0.241 Sum_probs=198.3
Q ss_pred cCccCcEEEEEEcC-CCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCC---CCEEEEEeCCCeEEEEEcc
Q psy15421 52 RGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPS---GSFVACGGLDNICSIYSLK 127 (340)
Q Consensus 52 ~~h~~~v~~~~~s~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~---~~~l~~~~~d~~v~i~~~~ 127 (340)
.+|...|.+++|+| ++.+|++++.|+.|++||+.+++....+. +...+.++.+.|. +.++++++.++.+++|++.
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 174 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK 174 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC
Confidence 36999999999999 77899999999999999999888777766 5677889999884 4599999999999999997
Q ss_pred CCCCceEEEEeecCCCcceEEEEEcCCC--eEEEEeCCCeEEEEECCCCc-eEEEE---------------ecCCCCeEE
Q psy15421 128 TREGNVRVSRELPGHTGYLSCCRFLDDN--QIVTSSGDMSCALWDIETGQ-QCASF---------------IGHTGDVMS 189 (340)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~d~~v~iwd~~~~~-~~~~~---------------~~~~~~v~~ 189 (340)
++. ....+.+|...+.++.|.+++ .+++++.|+.|++||++.+. ....+ ..|...+.+
T Consensus 175 ~~~----~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 250 (408)
T 4a11_B 175 SGS----CSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNG 250 (408)
T ss_dssp SSC----CCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEE
T ss_pred Ccc----eeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeE
Confidence 653 234567899999999998765 37899999999999998765 23333 468889999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEecCCC-----CCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEe
Q psy15421 190 LSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHE-----SDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY 264 (340)
Q Consensus 190 ~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~-----~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 264 (340)
++|+|+++++++++.||.|++||+++++....+..+. ..+........+..++.++.|+.|++||+.+.+.+..+
T Consensus 251 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~ 330 (408)
T 4a11_B 251 LCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITML 330 (408)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEE
T ss_pred EEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeee
Confidence 9999999999999999999999999887654443221 11222222334556777788999999999988887766
Q ss_pred ecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECC-CCCEEEEeeCCCcEEecC
Q psy15421 265 SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTE-DGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 265 ~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~-d~~~l~s~s~D~~i~iW~ 340 (340)
. .+...|++++|+|++++|++|+.||.|++|+..+.+.+.....+... ..+.+ +...+.+++.|+.+++|+
T Consensus 331 ~--~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~W~ 402 (408)
T 4a11_B 331 K--GHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTK---SQLNPAFEDAWSSSDEEGGTSAWS 402 (408)
T ss_dssp C--CCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC----------------------------------------
T ss_pred c--cCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEec---cccccccceeecccCccCceeecC
Confidence 4 23356999999999999999999999999999888766544333222 22333 334566788899999995
No 117
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=9.9e-33 Score=243.43 Aligned_cols=254 Identities=14% Similarity=0.205 Sum_probs=208.4
Q ss_pred EEeCCCCCeeEEeeCCCCcEEEEEECCC---CCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-e
Q psy15421 81 VWDSYTTNKVHAIPLRSSWVMTCAYAPS---GSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-Q 156 (340)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~v~~~~~---~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~ 156 (340)
.|+....+.+..+..|...|.+++|+|+ |++|++|+.|+.|++|++.+... .....+.+|...|.++.|++++ .
T Consensus 23 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~ 100 (368)
T 3mmy_A 23 TDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ--TIPKAQQMHTGPVLDVCWSDDGSK 100 (368)
T ss_dssp CCSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC--EEEEEEEECSSCEEEEEECTTSSE
T ss_pred cCCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc--eeEEEeccccCCEEEEEECcCCCE
Confidence 3455666677788899999999999999 69999999999999999976332 2335667899999999998765 6
Q ss_pred EEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEE--cCCCCEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEE
Q psy15421 157 IVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSL--APDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTF 234 (340)
Q Consensus 157 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~ 234 (340)
|++++.|+.|++||+.+++... +..|...+.+++| +|++.++++++.||.|++||+++++++..+..|. .+.++.+
T Consensus 101 l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~ 178 (368)
T 3mmy_A 101 VFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADV 178 (368)
T ss_dssp EEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEE
T ss_pred EEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEe
Confidence 8899999999999999887655 6679999999999 8999999999999999999999999888888664 5666666
Q ss_pred ecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcE----EEEEeCCCcEEEEeCCCc---eeeee
Q psy15421 235 FPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRL----LLAGYDDFNCNVWDSMKT---ERAGI 307 (340)
Q Consensus 235 ~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~----l~~g~~d~~i~iw~~~~~---~~~~~ 307 (340)
.+ ..+++++.++.+++|+++................+.++.+.++... +++|+.|+.|++|+.... .....
T Consensus 179 ~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~ 256 (368)
T 3mmy_A 179 IY--PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFT 256 (368)
T ss_dssp ET--TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEE
T ss_pred cC--CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcccccee
Confidence 64 4889999999999999987654433322222334566666655544 999999999999998776 45666
Q ss_pred eccCCc------------ceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 308 LAGHDN------------RVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 308 ~~~h~~------------~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
+.+|.. .|++++|+|++++|++|+.||.|++||
T Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd 301 (368)
T 3mmy_A 257 FKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWD 301 (368)
T ss_dssp EECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred eeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEE
Confidence 777766 799999999999999999999999996
No 118
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.8e-33 Score=241.65 Aligned_cols=209 Identities=21% Similarity=0.318 Sum_probs=177.4
Q ss_pred EeEEecCccCcEEEEEEcC--CCCeEEEEeCCCeEEEEeCCCCC--eeEEeeCCCCcEEEEEECCC--CCEEEEEeCCCe
Q psy15421 47 TRRTLRGHLAKIYAMHWGS--DSRNLVSASQDGKLIVWDSYTTN--KVHAIPLRSSWVMTCAYAPS--GSFVACGGLDNI 120 (340)
Q Consensus 47 ~~~~~~~h~~~v~~~~~s~--~~~~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~i~~v~~~~~--~~~l~~~~~d~~ 120 (340)
...+|++|.+.|++++|++ ++++|+||+.|++|++||+.+++ ....+..|...|.+++|+|+ +.+|++|+.|++
T Consensus 49 ~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~ 128 (316)
T 3bg1_A 49 LIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGA 128 (316)
T ss_dssp EEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSC
T ss_pred EEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCC
Confidence 3467899999999999986 48999999999999999998763 55677889999999999998 889999999999
Q ss_pred EEEEEccCCCCceEEEEeecCCCcceEEEEEcCC------------------CeEEEEeCCCeEEEEECCCC---ceEEE
Q psy15421 121 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD------------------NQIVTSSGDMSCALWDIETG---QQCAS 179 (340)
Q Consensus 121 v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------------------~~l~~~~~d~~v~iwd~~~~---~~~~~ 179 (340)
|++|++..+. .......+.+|...+.++.|.++ ..|++++.|+.|++||++.. +....
T Consensus 129 i~lwd~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~ 207 (316)
T 3bg1_A 129 ISLLTYTGEG-QWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQK 207 (316)
T ss_dssp EEEEEECSSS-CEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEEC
T ss_pred EEEEecCCCC-CcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeee
Confidence 9999987542 22233456788888888888764 46899999999999999755 35667
Q ss_pred EecCCCCeEEEEEcCCC----CEEEEEeCCCcEEEEECCCC---e-eeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q psy15421 180 FIGHTGDVMSLSLAPDM----RTFVSGACDASAKLWDIRDG---S-CKQTFPGHESDINAVTFFPNGWAFATGSDDATCR 251 (340)
Q Consensus 180 ~~~~~~~v~~~~~~~~~----~~~~sg~~dg~i~~wd~~~~---~-~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~ 251 (340)
+.+|...|.+++|+|++ .++++|+.||+|++||+++. . ....+..|...|.+++|+|++.+||+++.|+.|+
T Consensus 208 l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~ 287 (316)
T 3bg1_A 208 LEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVT 287 (316)
T ss_dssp CBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEE
T ss_pred cccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEE
Confidence 78899999999999986 78999999999999998762 1 2234567889999999999999999999999999
Q ss_pred EEeCc
Q psy15421 252 LFDIR 256 (340)
Q Consensus 252 iwd~~ 256 (340)
+|+..
T Consensus 288 lw~~~ 292 (316)
T 3bg1_A 288 LWKES 292 (316)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99975
No 119
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-33 Score=244.87 Aligned_cols=226 Identities=11% Similarity=0.093 Sum_probs=177.2
Q ss_pred ECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECC---------CCc
Q psy15421 105 YAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIE---------TGQ 175 (340)
Q Consensus 105 ~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~---------~~~ 175 (340)
+.+++.++++|+.|+.|++||+.++....... ...+..+.+.+. +++++.|++|++|+.. +++
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~------~~~v~~~~~~~~--~~s~s~D~~i~~w~~~~~~~~~~~~~~~ 115 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT------TPNPRTGGEHPA--IISRGPCNRLLLLYPGNQITILDSKTNK 115 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE------EECCCTTCCCCS--EEEECSTTEEEEEETTTEEEEEETTTCC
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe------cCCceeeeeCCc--eEEecCCCeEEEEEccCceEEeecCCcc
Confidence 44678899999999999999998764322221 233444445444 8899999999999665 444
Q ss_pred eEEEEe-cCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCCeeeeEec-CCCCCeEEEEEecCCCEEEEEeCCCcEE
Q psy15421 176 QCASFI-GHTGDVMSLSLAP--DMRTFVSGACDASAKLWDIRDGSCKQTFP-GHESDINAVTFFPNGWAFATGSDDATCR 251 (340)
Q Consensus 176 ~~~~~~-~~~~~v~~~~~~~--~~~~~~sg~~dg~i~~wd~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~s~d~~i~ 251 (340)
.+..+. +|.+.|.+++|+| +++++++|+.||+|++||++++++..... .|...+.+++|+|++.+|++|+.||.|+
T Consensus 116 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~ 195 (343)
T 3lrv_A 116 VLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILD 195 (343)
T ss_dssp EEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEE
T ss_pred eeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEE
Confidence 444444 6778899999999 99999999999999999999998866664 4556899999999999999999999999
Q ss_pred EEeCcCCcEE-EEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeecc---CCcceE--EEEECCCCC
Q psy15421 252 LFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG---HDNRVS--CLGVTEDGM 325 (340)
Q Consensus 252 iwd~~~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~---h~~~i~--~~~~s~d~~ 325 (340)
+||+++.+.+ ..+.. .+..+|++++|+|++.+|++++++ .|++||+.+.+....+.. |...+. +++|+|+|+
T Consensus 196 iwd~~~~~~~~~~~~~-~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 273 (343)
T 3lrv_A 196 VYNLSSPDQASSRFPV-DEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGK 273 (343)
T ss_dssp EEESSCTTSCCEECCC-CTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSS
T ss_pred EEECCCCCCCccEEec-cCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCcceeecccccccccccceEEEECCCCC
Confidence 9999988765 44432 234579999999999999999955 999999988776554443 545555 699999999
Q ss_pred EEEEeeC-CCcEEecC
Q psy15421 326 AVATGSW-DSFLRIWN 340 (340)
Q Consensus 326 ~l~s~s~-D~~i~iW~ 340 (340)
+|++++. |+.|+||+
T Consensus 274 ~l~~~s~~d~~i~v~~ 289 (343)
T 3lrv_A 274 NMIAYSNESNSLTIYK 289 (343)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred EEEEecCCCCcEEEEE
Confidence 9999999 99999994
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=2e-32 Score=241.62 Aligned_cols=242 Identities=14% Similarity=0.087 Sum_probs=176.0
Q ss_pred EEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCC-CeE-E
Q psy15421 81 VWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD-NQI-V 158 (340)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l-~ 158 (340)
||+..+.+.+.....|...|.+++|+|++++|++|+.++ +++|+..... .......+ .+..+.+... +.+ +
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~ 75 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVA----HIMSQEMR--HLSKVRMLHRTNYVAF 75 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEE----EEEEEECS--CCCEEEECTTSSEEEE
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcc----eeeeeecC--CeEEEEEcCCCCEEEE
Confidence 455566666667788999999999999999999988775 6899986432 11111111 2444555433 444 5
Q ss_pred EEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC-eeeeEecCCCCCeEEEEEecC
Q psy15421 159 TSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG-SCKQTFPGHESDINAVTFFPN 237 (340)
Q Consensus 159 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~-~~~~~~~~h~~~v~~v~~~~~ 237 (340)
+++.|+.|++||+.+++.+..+. +...+.+++++++. +++ ..|+.|++||++++ +.+..+.. +...+++++
T Consensus 76 ~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~-~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~- 147 (355)
T 3vu4_A 76 VTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVV-SYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN- 147 (355)
T ss_dssp ECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEE-EETTEEEEEESSTTCCBSSCCEE---EEEEEEEET-
T ss_pred EECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEE-EEcCEEEEEECCCCceeeEEecc---CCceEEEEc-
Confidence 67788999999999999888776 66789999998864 333 34889999999988 66655554 444566777
Q ss_pred CCEEEE--EeCCCcEEEEeCcCCcE----------------EEEeecCCcccceEEEEEcCCCcEEEEEeCCCc-EEEEe
Q psy15421 238 GWAFAT--GSDDATCRLFDIRADQE----------------LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFN-CNVWD 298 (340)
Q Consensus 238 ~~~l~s--~s~d~~i~iwd~~~~~~----------------~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~-i~iw~ 298 (340)
.+++. |+.||.|++||+.+.+. +..+ ..+...|++++|+|++++|++|+.|++ |++||
T Consensus 148 -~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~--~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd 224 (355)
T 3vu4_A 148 -GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI--KAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFK 224 (355)
T ss_dssp -TEEEEEESSCTTCEEEEECCC------------------CCEEE--CCCSSCEEEEEECTTSSEEEEEETTCSEEEEEE
T ss_pred -cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEE--EccCCceEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 45655 68999999999986541 2222 234457999999999999999999998 99999
Q ss_pred CCCceeeeeec-c-CCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 299 SMKTERAGILA-G-HDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 299 ~~~~~~~~~~~-~-h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
..+++++..+. + |...|++++|+|||++|++|+.|++|+|||
T Consensus 225 ~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~ 268 (355)
T 3vu4_A 225 TEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFE 268 (355)
T ss_dssp TTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEE
T ss_pred CCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEE
Confidence 99999999887 5 999999999999999999999999999996
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.7e-30 Score=231.81 Aligned_cols=283 Identities=16% Similarity=0.132 Sum_probs=222.6
Q ss_pred EEeEEecCccCcEEEEEEcCCCCeE-EEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEE-eCCCeEEE
Q psy15421 46 RTRRTLRGHLAKIYAMHWGSDSRNL-VSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACG-GLDNICSI 123 (340)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~-~~d~~v~i 123 (340)
+..+.+.+|. .+.+++|+|+++.+ ++++.|++|++||..+++.+..+..+. .+.+++|+|++++++.+ ..++.|++
T Consensus 23 ~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v 100 (391)
T 1l0q_A 23 KVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSV 100 (391)
T ss_dssp EEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEE
Confidence 4455677775 48999999999976 677799999999999998888887665 79999999999988654 46799999
Q ss_pred EEccCCCCceEEEEeecCCCcceEEEEEcCCCe-E-EEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEE-E
Q psy15421 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-I-VTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTF-V 200 (340)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~ 200 (340)
||+.++. ....+..+ ..+..+.|.+++. + ++++.++.|.+||+.+++....+..+ ..+.+++|+|+++.+ +
T Consensus 101 ~d~~~~~----~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~ 174 (391)
T 1l0q_A 101 IDTTSNT----VAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYV 174 (391)
T ss_dssp EETTTTE----EEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEE
T ss_pred EECCCCe----EEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEE
Confidence 9997653 22333333 3567788887654 5 57777999999999999887777655 457999999999877 6
Q ss_pred EEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEe---CCCcEEEEeCcCCcEEEEeecCCcccceEEEE
Q psy15421 201 SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS---DDATCRLFDIRADQELAMYSHDNIICGITSVA 277 (340)
Q Consensus 201 sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s---~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~ 277 (340)
+++.|+.|++||+++++....+. +...+.+++|+|+++++++++ .++.|++||+.+.+.+..+.... .+.+++
T Consensus 175 ~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~---~~~~~~ 250 (391)
T 1l0q_A 175 ANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP---DPAGIA 250 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS---SEEEEE
T ss_pred EeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC---CccEEE
Confidence 77889999999999998877776 456789999999999998888 68999999999887776665432 478899
Q ss_pred EcCCCcEE-EEEeCCCcEEEEeCCCceeeeeeccCCcceE---EEEECC------------CC----------CEEEEee
Q psy15421 278 FSRSGRLL-LAGYDDFNCNVWDSMKTERAGILAGHDNRVS---CLGVTE------------DG----------MAVATGS 331 (340)
Q Consensus 278 ~s~~~~~l-~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~---~~~~s~------------d~----------~~l~s~s 331 (340)
|+|++++| ++++.|+.|++||..+++.+..+..|..+.. .+.+.| +. ..+.+.+
T Consensus 251 ~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~ 330 (391)
T 1l0q_A 251 VTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLS 330 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECC
T ss_pred EccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCC
Confidence 99999977 5678899999999999988887776655432 122222 11 3466777
Q ss_pred CCCcEEecC
Q psy15421 332 WDSFLRIWN 340 (340)
Q Consensus 332 ~D~~i~iW~ 340 (340)
.|..+++||
T Consensus 331 ~~~~~~~W~ 339 (391)
T 1l0q_A 331 KDATEWKWD 339 (391)
T ss_dssp BSCSEEEEE
T ss_pred CCceEEEEE
Confidence 888999995
No 122
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-31 Score=242.15 Aligned_cols=248 Identities=15% Similarity=0.082 Sum_probs=200.4
Q ss_pred EEecCccCcEEEEEEcCCCCeE-EEEeCCCeEEEEeCC--CCCeeEEee--CCCCcEEEEEECCCCCEEEEEeCCCeEEE
Q psy15421 49 RTLRGHLAKIYAMHWGSDSRNL-VSASQDGKLIVWDSY--TTNKVHAIP--LRSSWVMTCAYAPSGSFVACGGLDNICSI 123 (340)
Q Consensus 49 ~~~~~h~~~v~~~~~s~~~~~l-~s~~~d~~i~iwd~~--~~~~~~~~~--~~~~~i~~v~~~~~~~~l~~~~~d~~v~i 123 (340)
..+.+|.+.|.+++|+|++++| ++++.||+|++||+. +++.+..+. .|...|.+++|+|++++|++|+.++.+++
T Consensus 96 ~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~ 175 (450)
T 2vdu_B 96 LGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYS 175 (450)
T ss_dssp ----CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEE
Confidence 3456888999999999999996 899999999999998 777777765 56788999999999999999999999999
Q ss_pred EEccCCCCceEEEEeecCCCcceEEEEEcCC---C-eEEEEeCCCeEEEEECCCCceEEE-EecCCCCeEEEEEcCCCCE
Q psy15421 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLDD---N-QIVTSSGDMSCALWDIETGQQCAS-FIGHTGDVMSLSLAPDMRT 198 (340)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~-~l~~~~~d~~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~ 198 (340)
|++............+.+|...+.++.|+++ + .|++++.|+.|++||+.+++.+.. +.+|...|.+++|+ ++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~ 254 (450)
T 2vdu_B 176 IDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYL 254 (450)
T ss_dssp EETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTE
T ss_pred EecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCE
Confidence 9987654321122345678999999999876 6 688999999999999999888777 45899999999999 9999
Q ss_pred EEEEeCCCcEEEEECCCCeeeeEecC-------------------------CCCCeEEEEEecCCCEEEEEe-CCCcEEE
Q psy15421 199 FVSGACDASAKLWDIRDGSCKQTFPG-------------------------HESDINAVTFFPNGWAFATGS-DDATCRL 252 (340)
Q Consensus 199 ~~sg~~dg~i~~wd~~~~~~~~~~~~-------------------------h~~~v~~v~~~~~~~~l~s~s-~d~~i~i 252 (340)
+++|+.|+.|++||+++++++..+.. ....|.+++|+|++.++++++ .|+.|++
T Consensus 255 l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~i 334 (450)
T 2vdu_B 255 LLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIII 334 (450)
T ss_dssp EEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEE
Confidence 99999999999999999988777652 235689999999999999999 8999999
Q ss_pred EeC--cCC---cEEEEeecCCcccceEEEEEcCCCcEEEEEeC------CCcEEEEeCC
Q psy15421 253 FDI--RAD---QELAMYSHDNIICGITSVAFSRSGRLLLAGYD------DFNCNVWDSM 300 (340)
Q Consensus 253 wd~--~~~---~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~------d~~i~iw~~~ 300 (340)
|++ ... ..+..+... ..+.+++|+|++.++++++. +..|++|...
T Consensus 335 w~~~~~~~~~l~~~~~~~~~---~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 335 LEMSEKQKGDLALKQIITFP---YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp EEECSSSTTCEEEEEEEECS---SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred EEeccCCCCceeeccEeccC---CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 999 444 333333322 45899999996544544443 4557888743
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=3.5e-32 Score=243.39 Aligned_cols=237 Identities=10% Similarity=0.049 Sum_probs=166.4
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCee-----EEeeCCCCcEEEEEECC--------CCCEEEEEeCCCeEE
Q psy15421 56 AKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKV-----HAIPLRSSWVMTCAYAP--------SGSFVACGGLDNICS 122 (340)
Q Consensus 56 ~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~-----~~~~~~~~~i~~v~~~~--------~~~~l~~~~~d~~v~ 122 (340)
..+....+.+++.+|++++.|++|+|||..+++.. ..+.+|...|.+++|+| ++++||+|+.|++|+
T Consensus 90 ~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~ 169 (393)
T 4gq1_A 90 GDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLI 169 (393)
T ss_dssp -------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEE
T ss_pred CCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEE
Confidence 33344444556678999999999999999877543 23568999999999998 889999999999999
Q ss_pred EEEccCCCCceEEEEeecCCCcceEEEEEcCCC--eEEEEeCCCeEEEEECCCCceEEE---------------------
Q psy15421 123 IYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN--QIVTSSGDMSCALWDIETGQQCAS--------------------- 179 (340)
Q Consensus 123 i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~d~~v~iwd~~~~~~~~~--------------------- 179 (340)
+||+..+. ....+..|...+.++.|++++ .|++++.|++|++||+++++....
T Consensus 170 ~Wd~~~~~----~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~ 245 (393)
T 4gq1_A 170 IWRLTDEG----PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLV 245 (393)
T ss_dssp EEEEETTE----EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC
T ss_pred EEECCCCc----eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccce
Confidence 99997643 233455678889999998764 588999999999999987754322
Q ss_pred ----EecCCCCeEEEEEc-CCCCEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEE------------------ec
Q psy15421 180 ----FIGHTGDVMSLSLA-PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTF------------------FP 236 (340)
Q Consensus 180 ----~~~~~~~v~~~~~~-~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~------------------~~ 236 (340)
..+|...+.++.|. |+++.+++++.|+++++||+..+.....+..|...+..+.+ +|
T Consensus 246 ~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (393)
T 4gq1_A 246 NTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHP 325 (393)
T ss_dssp ------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECS
T ss_pred eeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEcc
Confidence 23567778889886 79999999999999999999887766666555544444333 32
Q ss_pred --CCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeC
Q psy15421 237 --NGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 299 (340)
Q Consensus 237 --~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~ 299 (340)
++.++++|+.||.|++||+.+++....... +..+|.+++|+|||++||+++++| +.+|.+
T Consensus 326 ~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~--~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 326 RYMDYFATAHSQHGLIQLINTYEKDSNSIPIQ--LGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp SCTTEEEEEETTTTEEEEEETTCTTCCEEEEE--CSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEecC--CCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 344677888999999999988766544322 223699999999999999999887 556553
No 124
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=7.3e-31 Score=229.27 Aligned_cols=239 Identities=15% Similarity=0.146 Sum_probs=182.4
Q ss_pred EeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcC---CCeEEEEeCCCeEEE
Q psy15421 92 AIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD---DNQIVTSSGDMSCAL 168 (340)
Q Consensus 92 ~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~l~~~~~d~~v~i 168 (340)
.+.+|...|.+++|+|++++|++|+.|+.|++|++..+.........+.+|...|.++.|.+ +..|++++.|+.|++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 45689999999999999999999999999999999876666566777889999999999986 567899999999999
Q ss_pred EECCCC---------ceEEEEecCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCeeeeEec-------------C
Q psy15421 169 WDIETG---------QQCASFIGHTGDVMSLSLAPD--MRTFVSGACDASAKLWDIRDGSCKQTFP-------------G 224 (340)
Q Consensus 169 wd~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~~~sg~~dg~i~~wd~~~~~~~~~~~-------------~ 224 (340)
||++++ +....+..|...+.+++|+|+ +.++++++.||.|++||+++++....+. +
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPAN 165 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSS
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCC
Confidence 999876 457778889999999999999 9999999999999999998876543332 6
Q ss_pred CCCCeEEEEEecC---CCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCC----cEEEEEeCCCcEEEE
Q psy15421 225 HESDINAVTFFPN---GWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSG----RLLLAGYDDFNCNVW 297 (340)
Q Consensus 225 h~~~v~~v~~~~~---~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~----~~l~~g~~d~~i~iw 297 (340)
|...+.+++|+|+ +.++++++.|+.+.+|+....+.........+...|++++|+|++ ++|++|+.|+.|++|
T Consensus 166 ~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iw 245 (351)
T 3f3f_A 166 HLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIF 245 (351)
T ss_dssp CSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEE
T ss_pred cccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEE
Confidence 7889999999997 899999999999988887766553333334445679999999998 899999999999999
Q ss_pred eCCCceeeeeeccCCcceEEEEECCCCCEEEEe
Q psy15421 298 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATG 330 (340)
Q Consensus 298 ~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~ 330 (340)
|..+.........+...+.....+++...+.++
T Consensus 246 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (351)
T 3f3f_A 246 KITEKLSPLASEESLTNSNMFDNSADVDMDAQG 278 (351)
T ss_dssp EEEECC---------------------------
T ss_pred eCCCCcCccccCCcccceeccCCCccccccccc
Confidence 987665444443444444444444444444333
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.98 E-value=4.1e-29 Score=225.84 Aligned_cols=281 Identities=8% Similarity=0.014 Sum_probs=219.4
Q ss_pred ccCcEEEEE---EcCCCCeEEEEe--------------CCC--eEEEEeCCCC--CeeEEeeCCCCcEEEEEECCCCCEE
Q psy15421 54 HLAKIYAMH---WGSDSRNLVSAS--------------QDG--KLIVWDSYTT--NKVHAIPLRSSWVMTCAYAPSGSFV 112 (340)
Q Consensus 54 h~~~v~~~~---~s~~~~~l~s~~--------------~d~--~i~iwd~~~~--~~~~~~~~~~~~i~~v~~~~~~~~l 112 (340)
....+..++ |+|+++.++..+ .|+ .|..||..++ +.+..+..+. .+.+++|+|++.++
T Consensus 59 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~ 137 (433)
T 3bws_A 59 KNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTGF-QPKSVRFIDNTRLA 137 (433)
T ss_dssp TTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECSS-CBCCCEESSSSEEE
T ss_pred cCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCCC-CceEEEEeCCCeEE
Confidence 345678888 888877665432 333 3444444434 3445555544 35588999988888
Q ss_pred EEEeCCCeEEEEEccCCCCceEEEE-eecCCCcceEEEEEcCCC-eEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEE
Q psy15421 113 ACGGLDNICSIYSLKTREGNVRVSR-ELPGHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSL 190 (340)
Q Consensus 113 ~~~~~d~~v~i~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~ 190 (340)
++++.++.|++|++.+++....... .+.+|...+.++.|.+++ .+++++.|+.|++||+++++....+..|...+.++
T Consensus 138 ~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~ 217 (433)
T 3bws_A 138 IPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKIL 217 (433)
T ss_dssp EEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEE
T ss_pred EEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEE
Confidence 8888999999999876542110000 345788899999997766 46777889999999999999888888899999999
Q ss_pred EEcCCCCEEE-EEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEe--------CCCcEEEEeCcCCcEE
Q psy15421 191 SLAPDMRTFV-SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS--------DDATCRLFDIRADQEL 261 (340)
Q Consensus 191 ~~~~~~~~~~-sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s--------~d~~i~iwd~~~~~~~ 261 (340)
+|+|+++.++ +++.|+.|++||+++++.+..++.+ ..+.+++|+|++.++++++ .|+.|++||+.+++.+
T Consensus 218 ~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~ 296 (433)
T 3bws_A 218 LYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLI 296 (433)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEE
T ss_pred EEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEE
Confidence 9999999875 5558999999999999888887754 4589999999999999888 5899999999988776
Q ss_pred EEeecCCcccceEEEEEcCCCcEE-EEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeC--------
Q psy15421 262 AMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW-------- 332 (340)
Q Consensus 262 ~~~~~~~~~~~i~~~~~s~~~~~l-~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~-------- 332 (340)
....+. ..+.+++|+|+++.+ ++++.|+.|++|+..+++....+. |...+.+++|+|+|++|++++.
T Consensus 297 ~~~~~~---~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 372 (433)
T 3bws_A 297 DTIGPP---GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEG 372 (433)
T ss_dssp EEEEEE---ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTC
T ss_pred eeccCC---CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccc
Confidence 655433 257899999999754 667899999999999888777664 7788999999999998888876
Q ss_pred -------CCcEEecC
Q psy15421 333 -------DSFLRIWN 340 (340)
Q Consensus 333 -------D~~i~iW~ 340 (340)
||.|++||
T Consensus 373 ~~~~g~~dg~v~~~d 387 (433)
T 3bws_A 373 YLKKGLVLGKVYVID 387 (433)
T ss_dssp TTSCCSSCCEEEEEE
T ss_pred cccccccceEEEEEE
Confidence 57999996
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.98 E-value=6.9e-30 Score=218.13 Aligned_cols=247 Identities=14% Similarity=0.048 Sum_probs=166.8
Q ss_pred eeEEeEEecCccCcEEEEEEcCCCCeEEEEe--CCCeEEEEeCC--CC----CeeEEeeCCCCcEEEEEECCCCCEEEEE
Q psy15421 44 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSAS--QDGKLIVWDSY--TT----NKVHAIPLRSSWVMTCAYAPSGSFVACG 115 (340)
Q Consensus 44 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~--~d~~i~iwd~~--~~----~~~~~~~~~~~~i~~v~~~~~~~~l~~~ 115 (340)
+.+..+++.+|..+|..+.+.||-..|+... +=..-.++-+. .. .....-.+|...+..+ ++++++.++
T Consensus 75 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss 151 (356)
T 2w18_A 75 QWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSS 151 (356)
T ss_dssp BEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEE
T ss_pred cceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEec
Confidence 4467788999988777777777543333221 11111111110 00 0111111222223332 456666664
Q ss_pred e--CCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcC---C-CeEEEEeCCCeEEEEECCCCceEEEEecCC---CC
Q psy15421 116 G--LDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD---D-NQIVTSSGDMSCALWDIETGQQCASFIGHT---GD 186 (340)
Q Consensus 116 ~--~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~---~~ 186 (340)
+ .|+.|++|++.... . ....+.+|...+..+.|++ + ..|++++.|++|++||+++++.+..+.+|. ..
T Consensus 152 ~~g~d~~V~~~~~s~dG-~--~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~ 228 (356)
T 2w18_A 152 GTLSDQQVEVMTFAEDG-G--GKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQAS 228 (356)
T ss_dssp SSSTTCEEEEEEECTTS-C--EEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CC
T ss_pred ccCCCCcEEEEEECCCC-c--eeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceee
Confidence 3 68999999985432 2 3344556777777777754 2 468889999999999999999999998754 35
Q ss_pred eEEEEEcCCCCEE------------EEEeCCCcEEEEECCCCeeeeEe-----cCCCCCeEEEEEecCCCEEEEEeCCCc
Q psy15421 187 VMSLSLAPDMRTF------------VSGACDASAKLWDIRDGSCKQTF-----PGHESDINAVTFFPNGWAFATGSDDAT 249 (340)
Q Consensus 187 v~~~~~~~~~~~~------------~sg~~dg~i~~wd~~~~~~~~~~-----~~h~~~v~~v~~~~~~~~l~s~s~d~~ 249 (340)
+.+++|+|++.++ ++|+.|++|++||..+++++..+ .+|...+.+..++ +..+|+|+.|++
T Consensus 229 v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgT 306 (356)
T 2w18_A 229 VCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGT 306 (356)
T ss_dssp CEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSC
T ss_pred eEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCc
Confidence 7788999999876 56889999999999999877654 4676665444444 789999999999
Q ss_pred EEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeC
Q psy15421 250 CRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 299 (340)
Q Consensus 250 i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~ 299 (340)
|+|||+.+++.+..+.... ...+.+++|+|||++|++|+.|++|++||.
T Consensus 307 IkIWDl~tGk~l~tL~gH~-~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 307 IAIWDLLLGQCTALLPPVS-DQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEETTTCSEEEEECCC---CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEEECCCCcEEEEecCCC-CCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 9999999999888774221 112446899999999999999999999984
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=1e-28 Score=222.27 Aligned_cols=275 Identities=11% Similarity=0.101 Sum_probs=209.8
Q ss_pred ccCcEEEEEEcCCCC-eEEEEe----CCC----eEEEEeC--CCCCee--EEeeCCCCcEEEEEECC-------------
Q psy15421 54 HLAKIYAMHWGSDSR-NLVSAS----QDG----KLIVWDS--YTTNKV--HAIPLRSSWVMTCAYAP------------- 107 (340)
Q Consensus 54 h~~~v~~~~~s~~~~-~l~s~~----~d~----~i~iwd~--~~~~~~--~~~~~~~~~i~~v~~~~------------- 107 (340)
+...+...+|.+.+. .+++|+ .|| +++|||+ .+++.+ ..+..|...+..+++++
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~ 140 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKG 140 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCC
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCC
Confidence 345778888988875 455776 567 9999999 888876 44677766665555543
Q ss_pred -CCCEEEEEeCC------CeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCC---eEEEEECCCCce
Q psy15421 108 -SGSFVACGGLD------NICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDM---SCALWDIETGQQ 176 (340)
Q Consensus 108 -~~~~l~~~~~d------~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~---~v~iwd~~~~~~ 176 (340)
.+..++.++.+ +.|++||+.... ...+.+|...+.++.|++++ .+++++.++ .|.+||+.+++.
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~-----~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~ 215 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYDGYN-----QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV 215 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETTSCS-----CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCCCCC-----CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE
Confidence 25566665554 799999986422 23445678889999998876 577777765 999999998876
Q ss_pred EEEEecCCCCeEEEEEcCCCCEEE-EEeCCCc--EEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeC-CC--cE
Q psy15421 177 CASFIGHTGDVMSLSLAPDMRTFV-SGACDAS--AKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD-DA--TC 250 (340)
Q Consensus 177 ~~~~~~~~~~v~~~~~~~~~~~~~-sg~~dg~--i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~--~i 250 (340)
. .+..|...+.+++|+|+++.++ +++.|+. |++||+++++. ..+..|...+.+++|+|+|++|+.++. ++ .|
T Consensus 216 ~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i 293 (415)
T 2hqs_A 216 R-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQV 293 (415)
T ss_dssp E-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred E-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEE
Confidence 4 5677888999999999999777 6776665 99999998875 566778889999999999999998886 44 67
Q ss_pred EEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCC---CcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEE
Q psy15421 251 RLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD---FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV 327 (340)
Q Consensus 251 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d---~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l 327 (340)
++||+.+++......+ ...+.+++|+|+|++|++++.+ ..|++||..+++.. .+..|. .+.+++|+|||++|
T Consensus 294 ~~~d~~~~~~~~l~~~---~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l 368 (415)
T 2hqs_A 294 YKVNINGGAPQRITWE---GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMV 368 (415)
T ss_dssp EEEETTSSCCEECCCS---SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEE
T ss_pred EEEECCCCCEEEEecC---CCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEE
Confidence 7778877654322222 2347889999999999988764 58999999887664 455564 89999999999999
Q ss_pred EEeeCCC---cEEecC
Q psy15421 328 ATGSWDS---FLRIWN 340 (340)
Q Consensus 328 ~s~s~D~---~i~iW~ 340 (340)
++++.|+ .|++||
T Consensus 369 ~~~s~~~~~~~l~~~d 384 (415)
T 2hqs_A 369 IYSSSQGMGSVLNLVS 384 (415)
T ss_dssp EEEEEETTEEEEEEEE
T ss_pred EEEEcCCCccEEEEEE
Confidence 9988877 688875
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=2.6e-27 Score=219.76 Aligned_cols=284 Identities=14% Similarity=0.111 Sum_probs=217.4
Q ss_pred EeEEec-CccCcEEEEEEcCCCCeEEEEeCCCeEEEEeC--CCCCeeEEeeCCCCcEEEEEECC----CCCEEEEEeC-C
Q psy15421 47 TRRTLR-GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDS--YTTNKVHAIPLRSSWVMTCAYAP----SGSFVACGGL-D 118 (340)
Q Consensus 47 ~~~~~~-~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~--~~~~~~~~~~~~~~~i~~v~~~~----~~~~l~~~~~-d 118 (340)
...++. +|. +..++|+||+++|++++.|++|++||+ .+++.+..++. ...+..++|+| +|+++++++. +
T Consensus 171 ~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~ 247 (543)
T 1nir_A 171 IVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWP 247 (543)
T ss_dssp EEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEES
T ss_pred EEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccC
Confidence 345666 443 899999999999999999999999999 78888888874 45578999999 9999999884 8
Q ss_pred CeEEEEEccCCCCceEEEEeecC----------CC-cceEEEEEcCCC--eEEEEeCCCeEEEEECCCCceEE-EEecCC
Q psy15421 119 NICSIYSLKTREGNVRVSRELPG----------HT-GYLSCCRFLDDN--QIVTSSGDMSCALWDIETGQQCA-SFIGHT 184 (340)
Q Consensus 119 ~~v~i~~~~~~~~~~~~~~~~~~----------~~-~~v~~~~~~~~~--~l~~~~~d~~v~iwd~~~~~~~~-~~~~~~ 184 (340)
++|.+||..+.+. ...++. |. ..+..+.+++++ .+++...++.|.+||..+.+.+. ....+.
T Consensus 248 ~~v~v~D~~t~~~----~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~ 323 (543)
T 1nir_A 248 PQFAIMDGETLEP----KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAA 323 (543)
T ss_dssp SEEEEEETTTCCE----EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECC
T ss_pred CeEEEEecccccc----ceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccC
Confidence 9999999876532 222222 22 256777777643 35667779999999998765433 122456
Q ss_pred CCeEEEEEcCCCCEEEEE-eCCCcEEEEECCCCeeeeEecC----CCCCeEEEEEecC-CCEEEEEe-CCCcEEEEeCcC
Q psy15421 185 GDVMSLSLAPDMRTFVSG-ACDASAKLWDIRDGSCKQTFPG----HESDINAVTFFPN-GWAFATGS-DDATCRLFDIRA 257 (340)
Q Consensus 185 ~~v~~~~~~~~~~~~~sg-~~dg~i~~wd~~~~~~~~~~~~----h~~~v~~v~~~~~-~~~l~s~s-~d~~i~iwd~~~ 257 (340)
..+..++|+|++++++++ ..+++|.+||..++++...++. |.+....+ ++|+ +..++++. .|++|.+||+..
T Consensus 324 ~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 324 PFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp SSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred cCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCC
Confidence 678899999999977655 4689999999999998887763 65444443 4677 66778876 689999999987
Q ss_pred -------CcEEEEeecCCcccceEEEEEcCCCcEEEEEe-------CCCcEEEEeCCCceee-eee--------ccCCcc
Q psy15421 258 -------DQELAMYSHDNIICGITSVAFSRSGRLLLAGY-------DDFNCNVWDSMKTERA-GIL--------AGHDNR 314 (340)
Q Consensus 258 -------~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~-------~d~~i~iw~~~~~~~~-~~~--------~~h~~~ 314 (340)
.+.+..+.... .++..++|+|++++|++++ .+.+|.+||..+.+.. ..+ ..|...
T Consensus 403 ~~~~~~~~~~v~~l~~~g--~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~ 480 (543)
T 1nir_A 403 KNHPQYAWKKVAELQGQG--GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKR 480 (543)
T ss_dssp TTCTTTBTSEEEEEECSC--SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCE
T ss_pred CCCchhcCeEEEEEEcCC--CCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCc
Confidence 66666654322 3467799999999999987 2679999999988766 332 456788
Q ss_pred eEEEEECCCCCEEEEee-----CCCcEEecC
Q psy15421 315 VSCLGVTEDGMAVATGS-----WDSFLRIWN 340 (340)
Q Consensus 315 i~~~~~s~d~~~l~s~s-----~D~~i~iW~ 340 (340)
+..+.|+|||+.|+.+. .|+.|.|||
T Consensus 481 ~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D 511 (543)
T 1nir_A 481 VVQPEYNKRGDEVWFSVWNGKNDSSALVVVD 511 (543)
T ss_dssp EEEEEECSSSSEEEEEEECCTTSCCEEEEEE
T ss_pred eEeccCCCCCCEEEEEeecCCCCCCeEEEEE
Confidence 99999999999888652 479999997
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=1.3e-27 Score=215.06 Aligned_cols=264 Identities=13% Similarity=0.051 Sum_probs=207.5
Q ss_pred EEecCccCcEEEEEEcC--------------CCCeEEEEeCC------CeEEEEeCCCCCeeEEeeCCCCcEEEEEECCC
Q psy15421 49 RTLRGHLAKIYAMHWGS--------------DSRNLVSASQD------GKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPS 108 (340)
Q Consensus 49 ~~~~~h~~~v~~~~~s~--------------~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~ 108 (340)
+++.+|...+..+++++ .+..++.++.+ +.|++||... .....+..|...+.+++|+|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spd 189 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPD 189 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTT
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCC
Confidence 55778888777777664 25667766654 7999999874 445667778889999999999
Q ss_pred CCEEEEEeCCC---eEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCe-EE-EEeCCC--eEEEEECCCCceEEEEe
Q psy15421 109 GSFVACGGLDN---ICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IV-TSSGDM--SCALWDIETGQQCASFI 181 (340)
Q Consensus 109 ~~~l~~~~~d~---~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~d~--~v~iwd~~~~~~~~~~~ 181 (340)
|++|++++.++ .+++||+.++.. ..+..|...+.++.|++++. |+ +++.++ .|.+||+.+++. ..+.
T Consensus 190 g~~la~~s~~~~~~~i~~~d~~tg~~-----~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~ 263 (415)
T 2hqs_A 190 GSKLAYVTFESGRSALVIQTLANGAV-----RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVT 263 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCE-----EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECC
T ss_pred CCEEEEEEecCCCcEEEEEECCCCcE-----EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCc
Confidence 99999999885 999999976531 23456777888999998765 55 455454 499999988765 5677
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeC-CC--cEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCC---CcEEEEeC
Q psy15421 182 GHTGDVMSLSLAPDMRTFVSGAC-DA--SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDD---ATCRLFDI 255 (340)
Q Consensus 182 ~~~~~v~~~~~~~~~~~~~sg~~-dg--~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d---~~i~iwd~ 255 (340)
.|...+.+++|+|+++.+++++. ++ .|.+||+.+++. ..+..|...+.+++|+|+|++|++++.+ ..|++||+
T Consensus 264 ~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~ 342 (415)
T 2hqs_A 264 DGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL 342 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEET
T ss_pred CCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEEC
Confidence 78888999999999998888776 45 677779887764 3455567788999999999999988764 58999999
Q ss_pred cCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCC---cEEEEeCCCceeeeeeccCCcceEEEEECCCCC
Q psy15421 256 RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDF---NCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM 325 (340)
Q Consensus 256 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~---~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~ 325 (340)
.+++......+ . .+.+++|+|+|++|++++.++ .|++|+.. +.....+.+|.+.|.+++|+|...
T Consensus 343 ~~~~~~~l~~~-~---~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 343 ATGGVQVLSST-F---LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp TTCCEEECCCS-S---SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred CCCCEEEecCC-C---CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccccc
Confidence 87765432222 1 588999999999999988777 79999975 556778889999999999999754
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=4.7e-27 Score=218.03 Aligned_cols=270 Identities=11% Similarity=0.055 Sum_probs=212.5
Q ss_pred EcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEc--cCCCCceEEEEeec
Q psy15421 63 WGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSL--KTREGNVRVSRELP 140 (340)
Q Consensus 63 ~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~--~~~~~~~~~~~~~~ 140 (340)
|+|++..+++++.|++|.+||..+++.+.++..+.. +..++|+|++++|++++.|+.|++||+ .+. .....++
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~----~~~~~i~ 219 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEP----TKVAEIK 219 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSC----EEEEEEE
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCC----cEEEEEe
Confidence 789999999999999999999999999988885444 889999999999999999999999999 443 2334454
Q ss_pred CCCcceEEEEEcC----CC-eEEEEe-CCCeEEEEECCCCceEEEEec----------CCC-CeEEEEEcCCCCE-EEEE
Q psy15421 141 GHTGYLSCCRFLD----DN-QIVTSS-GDMSCALWDIETGQQCASFIG----------HTG-DVMSLSLAPDMRT-FVSG 202 (340)
Q Consensus 141 ~~~~~v~~~~~~~----~~-~l~~~~-~d~~v~iwd~~~~~~~~~~~~----------~~~-~v~~~~~~~~~~~-~~sg 202 (340)
. ......+.|++ ++ .+++++ .+++|.+||..+++.+..+.. |.. .+..+.++|++.. +++.
T Consensus 220 ~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~ 298 (543)
T 1nir_A 220 I-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV 298 (543)
T ss_dssp C-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred c-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE
Confidence 3 33456778887 65 565655 489999999999998887754 223 6889999997664 5567
Q ss_pred eCCCcEEEEECCCCeeee--EecCCCCCeEEEEEecCCCEEEEE-eCCCcEEEEeCcCCcEEEEeecCC--cccceEEEE
Q psy15421 203 ACDASAKLWDIRDGSCKQ--TFPGHESDINAVTFFPNGWAFATG-SDDATCRLFDIRADQELAMYSHDN--IICGITSVA 277 (340)
Q Consensus 203 ~~dg~i~~wd~~~~~~~~--~~~~h~~~v~~v~~~~~~~~l~s~-s~d~~i~iwd~~~~~~~~~~~~~~--~~~~i~~~~ 277 (340)
..+++|.+||+.+.+... .+. +...+..++|+|+|++++++ ..++.|.+||..+++.+..+.... +......+
T Consensus 299 ~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~- 376 (543)
T 1nir_A 299 KETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF- 376 (543)
T ss_dssp TTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-
T ss_pred CCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-
Confidence 789999999998765433 343 55668889999999987655 458999999999988776654221 11112222
Q ss_pred EcCC-CcEEEEEe-CCCcEEEEeCCC-------ceeeeeeccCCcceEEEEECCCCCEEEEee-------CCCcEEecC
Q psy15421 278 FSRS-GRLLLAGY-DDFNCNVWDSMK-------TERAGILAGHDNRVSCLGVTEDGMAVATGS-------WDSFLRIWN 340 (340)
Q Consensus 278 ~s~~-~~~l~~g~-~d~~i~iw~~~~-------~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s-------~D~~i~iW~ 340 (340)
++|+ +.+++++. .|++|.+|+..+ ++.+.++.+|...+..++++|||++|++++ .+++|.|||
T Consensus 377 ~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d 455 (543)
T 1nir_A 377 VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFD 455 (543)
T ss_dssp EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEE
T ss_pred CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEE
Confidence 5777 67777775 689999999987 888999999998999999999999999988 378999996
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=2.5e-27 Score=228.52 Aligned_cols=281 Identities=12% Similarity=0.082 Sum_probs=211.6
Q ss_pred cCcEEEEEEcCCCCeEEEEeC-CC-----eEEEEeCCCCCeeEEeeCCCC------------------------cEEEEE
Q psy15421 55 LAKIYAMHWGSDSRNLVSASQ-DG-----KLIVWDSYTTNKVHAIPLRSS------------------------WVMTCA 104 (340)
Q Consensus 55 ~~~v~~~~~s~~~~~l~s~~~-d~-----~i~iwd~~~~~~~~~~~~~~~------------------------~i~~v~ 104 (340)
...+.+++|+|||++|++++. |+ .|++||+.+++....+..+.. .+..++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 346899999999999999998 88 999999999887665544322 267889
Q ss_pred ECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCC
Q psy15421 105 YAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHT 184 (340)
Q Consensus 105 ~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~ 184 (340)
|+|||++|++++. +.+.+|++.++... ....+..|...+..+.|++++..++...++.|.+||+.+++.......+.
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~--~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKA--AVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTT--SCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCCCCC
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcc--eEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccCCc
Confidence 9999999999886 89999999765100 01234456777888999988764444456799999999876554333333
Q ss_pred CC----------------eEEEEEcCCCCEEEEEeCCC---------------------------------cEEEEECCC
Q psy15421 185 GD----------------VMSLSLAPDMRTFVSGACDA---------------------------------SAKLWDIRD 215 (340)
Q Consensus 185 ~~----------------v~~~~~~~~~~~~~sg~~dg---------------------------------~i~~wd~~~ 215 (340)
.. +.+++|+||++.|++++.|+ .|.+||+.+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 22 47799999999999888766 889999988
Q ss_pred -CeeeeEec--CCCCCeEEEEEecCCCEEEEEeC-----CCcEEEEeCcCCcEEEEeecCC--cccceEEEEEcCCCcEE
Q psy15421 216 -GSCKQTFP--GHESDINAVTFFPNGWAFATGSD-----DATCRLFDIRADQELAMYSHDN--IICGITSVAFSRSGRLL 285 (340)
Q Consensus 216 -~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~-----d~~i~iwd~~~~~~~~~~~~~~--~~~~i~~~~~s~~~~~l 285 (340)
++...... .|...+..++| |||++|+.++. +..|++||..+++....+.... ....+..++|+|||+++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~ 351 (741)
T 2ecf_A 273 QAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSIL 351 (741)
T ss_dssp TCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEE
T ss_pred CCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEE
Confidence 77554432 47778999999 99999987654 5779999998877655443221 11134578999999999
Q ss_pred EEEeCCCcEEEEeCC-CceeeeeeccCCcceEEE-EECCCCCEEE-EeeCCC--cEEecC
Q psy15421 286 LAGYDDFNCNVWDSM-KTERAGILAGHDNRVSCL-GVTEDGMAVA-TGSWDS--FLRIWN 340 (340)
Q Consensus 286 ~~g~~d~~i~iw~~~-~~~~~~~~~~h~~~i~~~-~~s~d~~~l~-s~s~D~--~i~iW~ 340 (340)
++++.|+.+++|... ++. ...+..|...|..+ .|+|||+.|+ +++.|+ .++||+
T Consensus 352 ~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 410 (741)
T 2ecf_A 352 WSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYA 410 (741)
T ss_dssp EEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEE
T ss_pred EEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEE
Confidence 999999988888654 344 67778888888887 5999998775 555565 888984
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=6.6e-26 Score=197.96 Aligned_cols=269 Identities=12% Similarity=0.140 Sum_probs=187.9
Q ss_pred eEEEEeCCCeEEEEeCCC-CCe-eEEeeCCCCcEEEEEECCCCCEEEEEeCC-CeEEEEEccCCCCceEEEEeecCCCcc
Q psy15421 69 NLVSASQDGKLIVWDSYT-TNK-VHAIPLRSSWVMTCAYAPSGSFVACGGLD-NICSIYSLKTREGNVRVSRELPGHTGY 145 (340)
Q Consensus 69 ~l~s~~~d~~i~iwd~~~-~~~-~~~~~~~~~~i~~v~~~~~~~~l~~~~~d-~~v~i~~~~~~~~~~~~~~~~~~~~~~ 145 (340)
.+++++.|+.|++||+.. ++. ......+...+..++|+|++++|++++.+ +.+.+|++....+.......+..+. .
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~ 85 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-S 85 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-C
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-C
Confidence 455558899999999853 322 22223355667889999999999988887 8999999974333444444444433 5
Q ss_pred eEEEEEcCCCe-EEEEe-CCCeEEEEECC---CCceEEEEecCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCC-Cee
Q psy15421 146 LSCCRFLDDNQ-IVTSS-GDMSCALWDIE---TGQQCASFIGHTGDVMSLSLAPDMRTFVSGA-CDASAKLWDIRD-GSC 218 (340)
Q Consensus 146 v~~~~~~~~~~-l~~~~-~d~~v~iwd~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~-~dg~i~~wd~~~-~~~ 218 (340)
+..+.|++++. +++++ .++.|.+||+. ..+....+. ....+.+++|+|+++.+++++ .++.|++||+.+ ++.
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 164 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL 164 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred CcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce
Confidence 66778887764 55554 48899999994 333334433 334588999999999888777 899999999987 644
Q ss_pred ee----EecC-CCCCeEEEEEecCCCEEEEE-eCCCcEEEEeCcC--CcE--EEEeec-C-C--cccceEEEEEcCCCcE
Q psy15421 219 KQ----TFPG-HESDINAVTFFPNGWAFATG-SDDATCRLFDIRA--DQE--LAMYSH-D-N--IICGITSVAFSRSGRL 284 (340)
Q Consensus 219 ~~----~~~~-h~~~v~~v~~~~~~~~l~s~-s~d~~i~iwd~~~--~~~--~~~~~~-~-~--~~~~i~~~~~s~~~~~ 284 (340)
.. .+.. ....+..++|+|++++++.+ ..++.|++||+.. +.. ...... . . ....+..++|+|++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~ 244 (343)
T 1ri6_A 165 VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRH 244 (343)
T ss_dssp EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSE
T ss_pred eeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCE
Confidence 32 2222 34578899999999976554 4789999999953 222 222211 1 1 1123668999999998
Q ss_pred EEE-EeCCCcEEEEeCC----CceeeeeeccCCcceEEEEECCCCCEEEEee-CCCcEEecC
Q psy15421 285 LLA-GYDDFNCNVWDSM----KTERAGILAGHDNRVSCLGVTEDGMAVATGS-WDSFLRIWN 340 (340)
Q Consensus 285 l~~-g~~d~~i~iw~~~----~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s-~D~~i~iW~ 340 (340)
|++ +..++.|.+|+.. +.+.+..+..+.. +..++|+|+|++|+.++ .|+.|.+|+
T Consensus 245 l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~ 305 (343)
T 1ri6_A 245 LYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYE 305 (343)
T ss_dssp EEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEE
T ss_pred EEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEE
Confidence 875 4478999999987 3344555554544 88999999999888777 689999993
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.96 E-value=2.3e-25 Score=193.98 Aligned_cols=271 Identities=11% Similarity=0.120 Sum_probs=192.5
Q ss_pred EEcCCCC-eEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeC-CCeEEEEEccCCCCceEEEEee
Q psy15421 62 HWGSDSR-NLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGL-DNICSIYSLKTREGNVRVSREL 139 (340)
Q Consensus 62 ~~s~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~-d~~v~i~~~~~~~~~~~~~~~~ 139 (340)
.|.++++ .+++.+.++.|++||..+++.+..+..+...+ .++|+|+++++++++. ++.+.+|+..++... ...+
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~---~~~~ 79 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK---VVAI 79 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE---EEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee---EEec
Confidence 3455554 47788899999999999999888877766667 9999999997766665 889999998765421 2333
Q ss_pred cCCCcceEEEEEcCCCe-EEEEeCC-C--eEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEE-EEeCCCc-EEEEEC
Q psy15421 140 PGHTGYLSCCRFLDDNQ-IVTSSGD-M--SCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFV-SGACDAS-AKLWDI 213 (340)
Q Consensus 140 ~~~~~~v~~~~~~~~~~-l~~~~~d-~--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-sg~~dg~-i~~wd~ 213 (340)
..+.....++.+++++. ++++..+ + .|.+||+.+++.+..+.. ...+.+++|+|++++++ ++..++. |.+|++
T Consensus 80 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 80 QEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp EECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred ccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 34444554467777664 5533334 2 899999999887776654 44578999999998554 5566688 999998
Q ss_pred CCCeee----eEecCCCCCeEEEEEecCCCEE-EEEeCCCcEEEEeCcCCcE---EEEeecCCcccceEEEEEcCCCcEE
Q psy15421 214 RDGSCK----QTFPGHESDINAVTFFPNGWAF-ATGSDDATCRLFDIRADQE---LAMYSHDNIICGITSVAFSRSGRLL 285 (340)
Q Consensus 214 ~~~~~~----~~~~~h~~~v~~v~~~~~~~~l-~s~s~d~~i~iwd~~~~~~---~~~~~~~~~~~~i~~~~~s~~~~~l 285 (340)
.....+ .........+..++|+|+|+++ +++..++.|++||+.+.+. +..+... ..+..++|+|+|++|
T Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~---~~~~~~~~spdg~~l 235 (331)
T 3u4y_A 159 DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN---NLPGTIVVSRDGSTV 235 (331)
T ss_dssp CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS---SCCCCEEECTTSSEE
T ss_pred CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC---CCCceEEECCCCCEE
Confidence 754322 1112334568899999999865 5555689999999987776 5555433 346789999999977
Q ss_pred EEEe-CCCcEEEEeCCCcee--eeeeccC----Ccc---eEEEEECCCCCEEEEe-eCCCcEEecC
Q psy15421 286 LAGY-DDFNCNVWDSMKTER--AGILAGH----DNR---VSCLGVTEDGMAVATG-SWDSFLRIWN 340 (340)
Q Consensus 286 ~~g~-~d~~i~iw~~~~~~~--~~~~~~h----~~~---i~~~~~s~d~~~l~s~-s~D~~i~iW~ 340 (340)
+++. .++.|.+||..+++. +..+..+ ... ...++|+|||++|+.+ ..++.|.+||
T Consensus 236 ~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d 301 (331)
T 3u4y_A 236 YVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFT 301 (331)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEE
Confidence 6554 578899999988776 3332222 222 3568999999987654 5567999996
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.95 E-value=1.4e-24 Score=190.52 Aligned_cols=269 Identities=13% Similarity=0.021 Sum_probs=206.4
Q ss_pred cCcEEEEEEcCCCCeEEEEeC-------CCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEE-EeCCCeEEEEEc
Q psy15421 55 LAKIYAMHWGSDSRNLVSASQ-------DGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVAC-GGLDNICSIYSL 126 (340)
Q Consensus 55 ~~~v~~~~~s~~~~~l~s~~~-------d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~-~~~d~~v~i~~~ 126 (340)
...+..++|+|+++.+++++. ++.|.+||..+++.+..+.... .+..++|+|++++++. ...++.+.+||.
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL-KPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS-CCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC-CcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 356889999999998887774 5789999999998887776543 3667899999996554 455799999998
Q ss_pred cCCCCceEEEEeecCCCc---------ceEEEEEcCCC-eEEEEe--CCCeEEEEECCCCceEEEEecCCCCeEEEEEcC
Q psy15421 127 KTREGNVRVSRELPGHTG---------YLSCCRFLDDN-QIVTSS--GDMSCALWDIETGQQCASFIGHTGDVMSLSLAP 194 (340)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~-~l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 194 (340)
.+++. ...+..+.. ....+.+++++ .++.+. .++.|.+||+.+++....+..+...+..++|+|
T Consensus 119 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~ 194 (353)
T 3vgz_A 119 KTGEV----KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDS 194 (353)
T ss_dssp TTCCE----EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEET
T ss_pred CCCee----EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECC
Confidence 76542 222222221 24667777664 455544 478999999999988877765666688999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeeeeEecC----CCCCeEEEEEecCCCEEEEEeC-CCcEEEEeCcCCcEEEEeecCCc
Q psy15421 195 DMRTFVSGACDASAKLWDIRDGSCKQTFPG----HESDINAVTFFPNGWAFATGSD-DATCRLFDIRADQELAMYSHDNI 269 (340)
Q Consensus 195 ~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~----h~~~v~~v~~~~~~~~l~s~s~-d~~i~iwd~~~~~~~~~~~~~~~ 269 (340)
+++.+++++.++.|.+||..+++....+.. +...+.+++|+|++++++.++. ++.|.+||..+++.+..+....
T Consensus 195 dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~- 273 (353)
T 3vgz_A 195 EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE- 273 (353)
T ss_dssp TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS-
T ss_pred CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC-
Confidence 999999999999999999999988776653 4556888999999987666654 5999999999887776654332
Q ss_pred ccceEEEEEcCCCcEEEEEe-CCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCC
Q psy15421 270 ICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWD 333 (340)
Q Consensus 270 ~~~i~~~~~s~~~~~l~~g~-~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D 333 (340)
...++|+|++++++++. .++.|.+||..+++.+..+..+ ..+.+++|+|||++|+.+..+
T Consensus 274 ---~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 274 ---SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp ---CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEEC
T ss_pred ---CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEcc
Confidence 24689999999666555 6899999999988887776543 477999999999976655544
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.95 E-value=8.3e-27 Score=224.24 Aligned_cols=280 Identities=12% Similarity=0.070 Sum_probs=201.2
Q ss_pred cEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCC---cEEEEEECCCCCEEEEEeCC---------CeEEEE
Q psy15421 57 KIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSS---WVMTCAYAPSGSFVACGGLD---------NICSIY 124 (340)
Q Consensus 57 ~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~---~i~~v~~~~~~~~l~~~~~d---------~~v~i~ 124 (340)
.+.+++|+|||+++++ +.||+|++||+.+++....+..|.. .+..++|+|||++|++++.+ +.+.+|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 4678999999998776 7899999999999888777776654 48899999999999998775 678899
Q ss_pred EccCCCCceEEEEeecCCCcceEEEEEcCCCe-EEEEeCCCeEEEEECCCCceEEEEecCCCCe----------------
Q psy15421 125 SLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IVTSSGDMSCALWDIETGQQCASFIGHTGDV---------------- 187 (340)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v---------------- 187 (340)
++.++.. ........|...+....|++++. ++.++ ++.|.+||+.+++.......+...+
T Consensus 97 d~~~~~~--~~l~~~~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~ 173 (723)
T 1xfd_A 97 KIPHGDP--QSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILK 173 (723)
T ss_dssp ESSSCCC--EECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred ECCCCce--EeccCCccccccccccEECCCCCEEEEEE-CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEecc
Confidence 9976542 22222234544577778888774 55555 4899999999887665554443333
Q ss_pred --EEEEEcCCCCEEEEEeCCC----------------------------------cEEEEECCCCeeeeEecCC------
Q psy15421 188 --MSLSLAPDMRTFVSGACDA----------------------------------SAKLWDIRDGSCKQTFPGH------ 225 (340)
Q Consensus 188 --~~~~~~~~~~~~~sg~~dg----------------------------------~i~~wd~~~~~~~~~~~~h------ 225 (340)
.+++|+||++.|++++.|+ .|++||+.+++....+..+
T Consensus 174 ~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~ 253 (723)
T 1xfd_A 174 THIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMR 253 (723)
T ss_dssp SSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGS
T ss_pred CcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCc
Confidence 7899999999999887553 7999999888765556544
Q ss_pred CCCeEEEEEecCCCEEEEEeC----CCcEEEEeCcCCcEEEEeec--CCcccc-eEEEEEcCCCcEEEE--EeCCC----
Q psy15421 226 ESDINAVTFFPNGWAFATGSD----DATCRLFDIRADQELAMYSH--DNIICG-ITSVAFSRSGRLLLA--GYDDF---- 292 (340)
Q Consensus 226 ~~~v~~v~~~~~~~~l~s~s~----d~~i~iwd~~~~~~~~~~~~--~~~~~~-i~~~~~s~~~~~l~~--g~~d~---- 292 (340)
...+..++|+|||+.+++.+. +..|++||+.+++....+.. ...... ...++|+|||+.|+. +..++
T Consensus 254 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 333 (723)
T 1xfd_A 254 EYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGK 333 (723)
T ss_dssp SEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSC
T ss_pred cceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcc
Confidence 567899999999998877653 35799999988765544321 111110 136799999997775 45666
Q ss_pred --cEEEEe-CCCce--eeeeeccCCcceE-EEEECCCCCEEEEeeCC---CcEEecC
Q psy15421 293 --NCNVWD-SMKTE--RAGILAGHDNRVS-CLGVTEDGMAVATGSWD---SFLRIWN 340 (340)
Q Consensus 293 --~i~iw~-~~~~~--~~~~~~~h~~~i~-~~~~s~d~~~l~s~s~D---~~i~iW~ 340 (340)
.|.+|+ ...++ +...+..+...+. .++|||||+.|+..+.+ +.++||+
T Consensus 334 ~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 390 (723)
T 1xfd_A 334 FYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYS 390 (723)
T ss_dssp EEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEE
T ss_pred eeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEE
Confidence 567777 33433 1444544444444 47999999998766555 7888884
No 136
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.95 E-value=1.4e-25 Score=210.54 Aligned_cols=268 Identities=11% Similarity=0.044 Sum_probs=194.4
Q ss_pred cCcEEEEEEcCCCCeEEEEeC-CCeEEEEeCCCCCeeEEeeCCC-CcEEEEEECCCCCEEEEEeC---CCeEEEEEccC-
Q psy15421 55 LAKIYAMHWGSDSRNLVSASQ-DGKLIVWDSYTTNKVHAIPLRS-SWVMTCAYAPSGSFVACGGL---DNICSIYSLKT- 128 (340)
Q Consensus 55 ~~~v~~~~~s~~~~~l~s~~~-d~~i~iwd~~~~~~~~~~~~~~-~~i~~v~~~~~~~~l~~~~~---d~~v~i~~~~~- 128 (340)
..+|++++|+|||+.|++++. ||+++||++.+++. ..+..+. ..+..++|+|| +.+++++. +...++|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~-~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET-VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE-EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc-EeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 457999999999999999887 99999999855544 4444444 57889999999 77777765 45667877765
Q ss_pred -CCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCC--
Q psy15421 129 -REGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACD-- 205 (340)
Q Consensus 129 -~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~d-- 205 (340)
..... .. ...+...+....+..+..+++...++.+.+||+.+++...... +.. .+++|+|||+.+++++.|
T Consensus 99 ~~g~~~-~l--~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~-~~~--~~~~~spDG~~la~~~~~~~ 172 (582)
T 3o4h_A 99 RPGEEQ-RL--EAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR-LPG--FGFVSDIRGDLIAGLGFFGG 172 (582)
T ss_dssp STTCCE-EC--TTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE-ESS--CEEEEEEETTEEEEEEEEET
T ss_pred CCCccc-cc--cCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec-CCC--ceEEECCCCCEEEEEEEcCC
Confidence 32222 11 1111222222333233445555555556699999886544333 333 789999999999988877
Q ss_pred --CcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCC--cEEEEeCcCCcEEEEeecCCcccceEEEE----
Q psy15421 206 --ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA--TCRLFDIRADQELAMYSHDNIICGITSVA---- 277 (340)
Q Consensus 206 --g~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~--~i~iwd~~~~~~~~~~~~~~~~~~i~~~~---- 277 (340)
+.|++||+.+++.. .+..|...+..++|+|||+.|+++..++ .|++||+.+++.. .+.. ....+..++
T Consensus 173 ~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~--~~~~~~~~~~~~~ 248 (582)
T 3o4h_A 173 GRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLEL--PSKDFSSYRPTAI 248 (582)
T ss_dssp TEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCC--SCSHHHHHCCSEE
T ss_pred CCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccC--CCcChhhhhhccc
Confidence 78999999888754 5677888899999999999999888899 8999999887765 3322 112233445
Q ss_pred ----EcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCc---EEecC
Q psy15421 278 ----FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSF---LRIWN 340 (340)
Q Consensus 278 ----~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~---i~iW~ 340 (340)
|+|||+++++++.|+++++|+. ++... .+.+.|.+++|+ ||+++++++.+.+ +.+||
T Consensus 249 ~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 249 TWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp EEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred cceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEc
Confidence 9999999999999999999998 55443 344778999999 9999998888754 55543
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=2.2e-25 Score=190.13 Aligned_cols=252 Identities=13% Similarity=0.104 Sum_probs=185.7
Q ss_pred EEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccC-CCCceEEEEeecCC-CcceEEE
Q psy15421 72 SASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKT-REGNVRVSRELPGH-TGYLSCC 149 (340)
Q Consensus 72 s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~-~~~~~~~~~~~~~~-~~~v~~~ 149 (340)
+.+.|++|++||+.+++.. .+..|...+.+++|+|++++|++++ ++.+.+|++.. +.. ......+ ...+..+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~----~~~~~~~~~~~~~~~ 90 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSP----EKVDTGFATICNNDH 90 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSC----EECCCTTCCCBCSCC
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCc----eEeccccccccccce
Confidence 4568999999999887755 4445678899999999999999886 78999999976 432 1223334 3567778
Q ss_pred EEcCCC-eEEEEe--CCCeEEEE--ECCCCceEEEEecCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEECC--CCeeeeE
Q psy15421 150 RFLDDN-QIVTSS--GDMSCALW--DIETGQQCASFIGHTGDVMSLSLAPDMRTFV-SGACDASAKLWDIR--DGSCKQT 221 (340)
Q Consensus 150 ~~~~~~-~l~~~~--~d~~v~iw--d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-sg~~dg~i~~wd~~--~~~~~~~ 221 (340)
.|++++ .+++++ .++...+| ++.+++ ...+.. ...+..++|+|+++.++ +++.|+.+++|+++ .+. ...
T Consensus 91 ~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~-~~~ 167 (297)
T 2ojh_A 91 GISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV-ETR 167 (297)
T ss_dssp EECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC-EEE
T ss_pred EECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCc-ceE
Confidence 888775 566666 33445555 555444 333333 34588999999999877 78889999999853 333 455
Q ss_pred ecCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEeCc-CCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCC--------
Q psy15421 222 FPGHESDINAVTFFPNGWAFATGS-DDATCRLFDIR-ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD-------- 291 (340)
Q Consensus 222 ~~~h~~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~-~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d-------- 291 (340)
+..|...+.+++|+|++++++.++ .++.+++|++. ....+..+.. ....+..++|+|++++|++++.+
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 245 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD--SAYGDWFPHPSPSGDKVVFVSYDADVFDHPR 245 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC--CSEEEEEEEECTTSSEEEEEEEETTCCSCCS
T ss_pred cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec--CCcccCCeEECCCCCEEEEEEcCCCCCcccc
Confidence 666788899999999999888766 58999999986 3334433322 22357889999999999988765
Q ss_pred ---CcEEEEeCCCcee--eeeeccCCcceEEEEECCCCCEEEEeeCCC
Q psy15421 292 ---FNCNVWDSMKTER--AGILAGHDNRVSCLGVTEDGMAVATGSWDS 334 (340)
Q Consensus 292 ---~~i~iw~~~~~~~--~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~ 334 (340)
+.|.+||..+++. +..+.+|...+.+++|+|||++|++++.|.
T Consensus 246 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 246 DLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp SEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred cCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5699999877654 444558889999999999999999887764
No 138
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.95 E-value=3.2e-25 Score=221.37 Aligned_cols=286 Identities=10% Similarity=0.100 Sum_probs=209.0
Q ss_pred eEEecCccCcEEEEEEcCCCCeEEEEeCC------CeEEEEeCCCCCeeEEeeCCCCcE-------EEEEECCCCCEEEE
Q psy15421 48 RRTLRGHLAKIYAMHWGSDSRNLVSASQD------GKLIVWDSYTTNKVHAIPLRSSWV-------MTCAYAPSGSFVAC 114 (340)
Q Consensus 48 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~i-------~~v~~~~~~~~l~~ 114 (340)
.+.+.+|...+.+++|||||++|++++.+ ..|++||+.+++ ...+..|...+ ..++|+|||+++++
T Consensus 45 ~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~ 123 (1045)
T 1k32_A 45 TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGNLIIS 123 (1045)
T ss_dssp EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEEEEECTTCCEEEE
T ss_pred EEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCcccccccccccccCCCCCEEEEE
Confidence 46788999999999999999999988654 479999988765 56677777777 89999999997777
Q ss_pred EeCC----C--eEEEEEccCCCCce-------------------------------------E--------EEEeecCCC
Q psy15421 115 GGLD----N--ICSIYSLKTREGNV-------------------------------------R--------VSRELPGHT 143 (340)
Q Consensus 115 ~~~d----~--~v~i~~~~~~~~~~-------------------------------------~--------~~~~~~~~~ 143 (340)
++.+ + .+.+|++..+.... . ....+.+|.
T Consensus 124 ~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~ 203 (1045)
T 1k32_A 124 TDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMS 203 (1045)
T ss_dssp ECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCS
T ss_pred ECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCC
Confidence 7754 3 46666654321000 0 001123455
Q ss_pred cceEEEEEcCCCeEEEEeCCCeEEEEECCC-CceEE---------------------------------------EEec-
Q psy15421 144 GYLSCCRFLDDNQIVTSSGDMSCALWDIET-GQQCA---------------------------------------SFIG- 182 (340)
Q Consensus 144 ~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~-~~~~~---------------------------------------~~~~- 182 (340)
..+....|.++..+++++.|+.+.+|.+.. +.... .+..
T Consensus 204 ~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~~l~~~ 283 (1045)
T 1k32_A 204 THVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDTEKIEKIEIG 283 (1045)
T ss_dssp SCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTTCCEEECCCC
T ss_pred CcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCceEeeeeccC
Confidence 555555665553344555566667775432 11111 1111
Q ss_pred ----------CCCCeEEEEEc-CCCCEEEEEeCCCcEEEEECCCCeeeeEecCCCC-CeEEEEEecCCCEEEEEeCCCcE
Q psy15421 183 ----------HTGDVMSLSLA-PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHES-DINAVTFFPNGWAFATGSDDATC 250 (340)
Q Consensus 183 ----------~~~~v~~~~~~-~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~-~v~~v~~~~~~~~l~s~s~d~~i 250 (340)
|...+.+++|+ |+++.+++++ ++.|.+|++..+... .+..|.. .+..++|+ +|+.++.++.+..+
T Consensus 284 ~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l 360 (1045)
T 1k32_A 284 DLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDF 360 (1045)
T ss_dssp CCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEE
T ss_pred cccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCce
Confidence 12247788899 9998888777 788999998877643 3566776 89999999 99999999988888
Q ss_pred E-EEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEE
Q psy15421 251 R-LFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVAT 329 (340)
Q Consensus 251 ~-iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s 329 (340)
. +||....+..... .....+..++|+|||++|++++.++.|++||..+++....+.+|.+.+.+++|||||++|++
T Consensus 361 ~~~~d~~~~~~~~l~---~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~ 437 (1045)
T 1k32_A 361 LGIYDYRTGKAEKFE---ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAY 437 (1045)
T ss_dssp EEEEETTTCCEEECC---CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEE
T ss_pred EEEEECCCCCceEec---CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEE
Confidence 8 8998876544332 22345889999999999999999999999999998887777789999999999999999998
Q ss_pred eeCCC----------cEEecC
Q psy15421 330 GSWDS----------FLRIWN 340 (340)
Q Consensus 330 ~s~D~----------~i~iW~ 340 (340)
++.++ .|++||
T Consensus 438 ~~~~~~~~~~~~~~~~i~l~d 458 (1045)
T 1k32_A 438 GFPLKHGETDGYVMQAIHVYD 458 (1045)
T ss_dssp EEEECSSTTCSCCEEEEEEEE
T ss_pred EecCccccccCCCCCeEEEEE
Confidence 88754 899996
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=8.3e-25 Score=190.49 Aligned_cols=261 Identities=16% Similarity=0.099 Sum_probs=193.6
Q ss_pred CeEEEEeCCCeEEEEeCCCCCeeEEeeCCCC--cEEEEEECCCCCEE-EEEeCCCeEEEEEccCCCCceEEEEeecC---
Q psy15421 68 RNLVSASQDGKLIVWDSYTTNKVHAIPLRSS--WVMTCAYAPSGSFV-ACGGLDNICSIYSLKTREGNVRVSRELPG--- 141 (340)
Q Consensus 68 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~i~~v~~~~~~~~l-~~~~~d~~v~i~~~~~~~~~~~~~~~~~~--- 141 (340)
+++++++.++.|++||..+++.+..+..... .+..++|+|+++++ +++..++.|.+|++.+++... ......
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~--~~~~~~~~~ 79 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLG--RIDLSTPEE 79 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEE--EEECCBTTE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEe--eEEcCCccc
Confidence 4789999999999999999888777764432 46788999999876 455567899999987654211 111111
Q ss_pred CCcceEEEEEcCCC-eEEEEe------------CCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcE
Q psy15421 142 HTGYLSCCRFLDDN-QIVTSS------------GDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASA 208 (340)
Q Consensus 142 ~~~~v~~~~~~~~~-~l~~~~------------~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i 208 (340)
|...+..+.|++++ .++.+. .++.|.+||+.+++....+.. ...+.+++|+|++++++++ ++.|
T Consensus 80 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i 156 (337)
T 1pby_B 80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDL 156 (337)
T ss_dssp EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSE
T ss_pred ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeE
Confidence 11234556777766 566554 579999999998887766654 4567889999999988877 7899
Q ss_pred EEEECCCCeeeeEecCCC--CCeEEEEEecCCCEEEEEeCC-C-----------------------cEEEEeCcCCcEEE
Q psy15421 209 KLWDIRDGSCKQTFPGHE--SDINAVTFFPNGWAFATGSDD-A-----------------------TCRLFDIRADQELA 262 (340)
Q Consensus 209 ~~wd~~~~~~~~~~~~h~--~~v~~v~~~~~~~~l~s~s~d-~-----------------------~i~iwd~~~~~~~~ 262 (340)
.+||+.+++....++.+. .+ +.|+|++..++..+.+ + .|.+||..+++..
T Consensus 157 ~~~d~~~~~~~~~~~~~~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~- 232 (337)
T 1pby_B 157 HVMDPEAGTLVEDKPIQSWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA- 232 (337)
T ss_dssp EEEETTTTEEEEEECSTTTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-
T ss_pred EEEECCCCcEeeeeeccccCCC---ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-
Confidence 999999998877776443 33 3788988766544432 2 4689999887654
Q ss_pred EeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 263 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 263 ~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
..........+..++|+|++++++++ ++.|.+||..+++....+.. ...+.+++|+|||++|++++.|+.|++||
T Consensus 233 ~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d 307 (337)
T 1pby_B 233 MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYD 307 (337)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEE
T ss_pred EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEE
Confidence 22222222357789999999999988 68999999988887776653 35678999999999999899999999996
No 140
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=1.7e-24 Score=216.19 Aligned_cols=278 Identities=12% Similarity=0.055 Sum_probs=217.8
Q ss_pred eEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCC-CCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Q psy15421 48 RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYT-TNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSL 126 (340)
Q Consensus 48 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~ 126 (340)
.+.+.+|...+.++.|+++ .++++++.|++++||.... +.....+..|.. +...+|+|+|++++.+ .++.+.+|++
T Consensus 196 ~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~-~~~~~~SpDG~~la~~-~~~~i~~~d~ 272 (1045)
T 1k32_A 196 FKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTD-YYPRHLNTDGRRILFS-KGGSIYIFNP 272 (1045)
T ss_dssp EEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCS-SCEEEEEESSSCEEEE-ETTEEEEECT
T ss_pred eEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCCC-cceeeEcCCCCEEEEE-eCCEEEEecC
Confidence 3456899999999999988 6777888899999997643 333444444443 4567899999998887 5889999998
Q ss_pred cCCCCceEEEEeecC-----------CCcceEEEEEc-CCCe-EEEEeCCCeEEEEECCCCceEEEEecCCC-CeEEEEE
Q psy15421 127 KTREGNVRVSRELPG-----------HTGYLSCCRFL-DDNQ-IVTSSGDMSCALWDIETGQQCASFIGHTG-DVMSLSL 192 (340)
Q Consensus 127 ~~~~~~~~~~~~~~~-----------~~~~v~~~~~~-~~~~-l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-~v~~~~~ 192 (340)
... .. . .+.. |...+..+.|+ +++. ++.++ ++.+.+|++..++.. .+..|.. .+..++|
T Consensus 273 ~~~--~l--~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~ 345 (1045)
T 1k32_A 273 DTE--KI--E-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGG 345 (1045)
T ss_dssp TTC--CE--E-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECS
T ss_pred Cce--Ee--e-eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeE
Confidence 322 11 1 2333 34467888898 8875 55554 889999999877643 4566777 7899999
Q ss_pred cCCCCEEEEEeCCCcEE-EEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCccc
Q psy15421 193 APDMRTFVSGACDASAK-LWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIIC 271 (340)
Q Consensus 193 ~~~~~~~~sg~~dg~i~-~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~ 271 (340)
+ +++.++.++.++.+. +||+..+.... +.+|...+..++|+|||+++++++.++.|++||+.+++....... +..
T Consensus 346 s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~--~~~ 421 (1045)
T 1k32_A 346 D-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS--REA 421 (1045)
T ss_dssp S-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC--SSS
T ss_pred c-CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccC--CCC
Confidence 9 999999988888898 99998776543 447888999999999999999999999999999988776555421 223
Q ss_pred ceEEEEEcCCCcEEEEEeCCC----------cEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 272 GITSVAFSRSGRLLLAGYDDF----------NCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 272 ~i~~~~~s~~~~~l~~g~~d~----------~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
.+..++|+|||++|++++.++ .|++||..+++ ...+..|...+..++|+|||++|+.++.++..++|+
T Consensus 422 ~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 422 MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPD 499 (1045)
T ss_dssp CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEEC
T ss_pred CccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcc
Confidence 477899999999999887654 89999988876 667778988999999999999999999888777774
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=4.9e-24 Score=205.51 Aligned_cols=265 Identities=11% Similarity=0.089 Sum_probs=192.9
Q ss_pred cEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCC--eeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceE
Q psy15421 57 KIYAMHWGSDSRNLVSASQDGKLIVWDSYTTN--KVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVR 134 (340)
Q Consensus 57 ~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~ 134 (340)
.|.+++|+|||++|++++. +.|++||+.++. ....+..+...+..++|+|||++|+.++ ++.|.+|++.++.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~---- 183 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGR---- 183 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTE----
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCC----
Confidence 3889999999999999887 999999998873 3445566677899999999999999887 4589999987542
Q ss_pred EEEeecCCCcc----------------eEEEEEcCCC-eEEEEeCCC---------------------------------
Q psy15421 135 VSRELPGHTGY----------------LSCCRFLDDN-QIVTSSGDM--------------------------------- 164 (340)
Q Consensus 135 ~~~~~~~~~~~----------------v~~~~~~~~~-~l~~~~~d~--------------------------------- 164 (340)
.......+... +..+.|++++ .|+.++.|+
T Consensus 184 ~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~ 263 (741)
T 2ecf_A 184 QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQV 263 (741)
T ss_dssp EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEE
T ss_pred EEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCee
Confidence 11111122211 3557788776 477766554
Q ss_pred eEEEEECCC-CceEEEEe--cCCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEECCCCeeeeEecCCCC----CeEEE
Q psy15421 165 SCALWDIET-GQQCASFI--GHTGDVMSLSLAPDMRTFVSGAC-----DASAKLWDIRDGSCKQTFPGHES----DINAV 232 (340)
Q Consensus 165 ~v~iwd~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~~~sg~~-----dg~i~~wd~~~~~~~~~~~~h~~----~v~~v 232 (340)
.|.+||+.+ ++...... .|...+..++| ||++.++.++. +..|.+||+.++++...+..+.. .+..+
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 342 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSL 342 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCC
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCce
Confidence 788999988 76544332 36677899999 99999886653 67899999999987766655443 45688
Q ss_pred EEecCCCEEEEEeCCCcEEEEeCc-CCcEEEEeecCCcccceEEE-EEcCCCcEEE-EEeCCC--cEEEEeCCC-ceeee
Q psy15421 233 TFFPNGWAFATGSDDATCRLFDIR-ADQELAMYSHDNIICGITSV-AFSRSGRLLL-AGYDDF--NCNVWDSMK-TERAG 306 (340)
Q Consensus 233 ~~~~~~~~l~s~s~d~~i~iwd~~-~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~-~g~~d~--~i~iw~~~~-~~~~~ 306 (340)
+|+|||+.+++++.|+.++||.+. .++ ...+... ...+..+ .|+|+++.|+ +++.++ .+++|+... +....
T Consensus 343 ~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~--~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~ 419 (741)
T 2ecf_A 343 RFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHG--NWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQ 419 (741)
T ss_dssp EECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCS--SSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCE
T ss_pred EECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeec--ceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCee
Confidence 999999999999999988888765 233 3333221 2346666 5999998775 455555 899998753 44455
Q ss_pred eeccCCcceEEEEECCCCCEEEEeeC
Q psy15421 307 ILAGHDNRVSCLGVTEDGMAVATGSW 332 (340)
Q Consensus 307 ~~~~h~~~i~~~~~s~d~~~l~s~s~ 332 (340)
.+.. ...+..++|||||++|+....
T Consensus 420 ~l~~-~~~~~~~~~spdg~~l~~~~~ 444 (741)
T 2ecf_A 420 RLSK-APGMHSASFARNASVYVDSWS 444 (741)
T ss_dssp ECCC-SCSEEEEEECTTSSEEEEEEE
T ss_pred eccc-CCCceEEEECCCCCEEEEEec
Confidence 5554 667889999999998875543
No 142
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=5.3e-24 Score=181.54 Aligned_cols=240 Identities=15% Similarity=0.111 Sum_probs=179.2
Q ss_pred eEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCC-CCeeEEeeCC-CCcEEEEEECCCCCEEEEEe--CCCeEEE
Q psy15421 48 RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYT-TNKVHAIPLR-SSWVMTCAYAPSGSFVACGG--LDNICSI 123 (340)
Q Consensus 48 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~-~~~i~~v~~~~~~~~l~~~~--~d~~v~i 123 (340)
...+..|...|.+++|+|++++|++++ ++.|++||+.+ ++.......+ ...+.+++|+|+++++++++ .++..++
T Consensus 34 ~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l 112 (297)
T 2ojh_A 34 MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAI 112 (297)
T ss_dssp EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEE
T ss_pred eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceE
Confidence 345667899999999999999999876 78999999998 7766655555 35678899999999999998 4456677
Q ss_pred EEccCCCCceEEEEeecCCCcceEEEEEcCCCe-EE-EEeCCCeEEEEECCC-CceEEEEecCCCCeEEEEEcCCCCEEE
Q psy15421 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IV-TSSGDMSCALWDIET-GQQCASFIGHTGDVMSLSLAPDMRTFV 200 (340)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~d~~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~ 200 (340)
|.+....+.. ..+..+. .+..+.|++++. ++ ++..++.+.+|++.. ......+..+...+.+++|+|+++.++
T Consensus 113 ~~~~~~~~~~---~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 188 (297)
T 2ojh_A 113 YLLPSTGGTP---RLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIY 188 (297)
T ss_dssp EEEETTCCCC---EECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEE
T ss_pred EEEECCCCce---EEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEE
Confidence 7765433322 2222333 366778887654 54 677799999998642 234456667888899999999999877
Q ss_pred EEe-CCCcEEEEECC-CCeeeeEecCCCCCeEEEEEecCCCEEEEEeCC-----------CcEEEEeCcCCcEEEEeecC
Q psy15421 201 SGA-CDASAKLWDIR-DGSCKQTFPGHESDINAVTFFPNGWAFATGSDD-----------ATCRLFDIRADQELAMYSHD 267 (340)
Q Consensus 201 sg~-~dg~i~~wd~~-~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d-----------~~i~iwd~~~~~~~~~~~~~ 267 (340)
.++ .++.+++|++. .+.....+..|...+.+++|+|++++++.++.+ +.|++||+.+++........
T Consensus 189 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 268 (297)
T 2ojh_A 189 FNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLF 268 (297)
T ss_dssp EEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEE
T ss_pred EEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccC
Confidence 665 59999999886 455566777788889999999999999988876 56999999876543332211
Q ss_pred CcccceEEEEEcCCCcEEEEEeCCC
Q psy15421 268 NIICGITSVAFSRSGRLLLAGYDDF 292 (340)
Q Consensus 268 ~~~~~i~~~~~s~~~~~l~~g~~d~ 292 (340)
.+...+..++|+|++++|++++.+.
T Consensus 269 ~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 269 GGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp ESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCCcccccceECCCCCEEEEEEecc
Confidence 2223477889999999998877653
No 143
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=2.1e-23 Score=200.03 Aligned_cols=273 Identities=13% Similarity=0.093 Sum_probs=193.7
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccC-----CC
Q psy15421 56 AKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKT-----RE 130 (340)
Q Consensus 56 ~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~-----~~ 130 (340)
..|.+++|+|| +.++.+ .|+.|++||+.+++.. .+..+...+..++|+|||++++++ .++.|.+|++.+ +.
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVT-YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSR 157 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEE-EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceE-EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCC
Confidence 56999999999 665554 4599999999877554 344455667788999999999985 689999999976 43
Q ss_pred CceEEEEeecCCCc--------------ceEEEEEcCCC-eEEEEe---------------------------------C
Q psy15421 131 GNVRVSRELPGHTG--------------YLSCCRFLDDN-QIVTSS---------------------------------G 162 (340)
Q Consensus 131 ~~~~~~~~~~~~~~--------------~v~~~~~~~~~-~l~~~~---------------------------------~ 162 (340)
.. .....+.. .+..+.|++++ .|++++ .
T Consensus 158 ~~----~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~ 233 (706)
T 2z3z_A 158 AI----AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSH 233 (706)
T ss_dssp CE----ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCC
T ss_pred cE----EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCC
Confidence 21 11111222 14667888776 466665 4
Q ss_pred CCeEEEEECCCCceEEEEe--cCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC-eeeeEec-CCCC---CeE
Q psy15421 163 DMSCALWDIETGQQCASFI--GHTGDVMSLSLAPDMRTFVSGACDA-----SAKLWDIRDG-SCKQTFP-GHES---DIN 230 (340)
Q Consensus 163 d~~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~sg~~dg-----~i~~wd~~~~-~~~~~~~-~h~~---~v~ 230 (340)
+..|.+||+.+++...... .|...+.+++|+||++.+++++.++ .|.+||+.++ ....... .+.. .+.
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 313 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLH 313 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCS
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccC
Confidence 5679999999887543332 4666789999999999999887776 9999999998 4333222 1222 246
Q ss_pred EEEEec--CCCEEEEEeCCCcEEEEeCc-CCcEEEEeecCCcccceEE-EEEcCCCcEEEEEeC-CC----cEEEEeCCC
Q psy15421 231 AVTFFP--NGWAFATGSDDATCRLFDIR-ADQELAMYSHDNIICGITS-VAFSRSGRLLLAGYD-DF----NCNVWDSMK 301 (340)
Q Consensus 231 ~v~~~~--~~~~l~s~s~d~~i~iwd~~-~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~g~~-d~----~i~iw~~~~ 301 (340)
+++|+| +|+++++++.|+.+++|++. .++.+..+... ...+.. ++|+|+++.|+.++. ++ .|..|+..+
T Consensus 314 ~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~--~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 391 (706)
T 2z3z_A 314 PLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKG--EWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKG 391 (706)
T ss_dssp CCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCS--SSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTC
T ss_pred CceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCC--CeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCC
Confidence 789999 99999999999999999876 44444444222 233555 799999988766554 44 666777666
Q ss_pred ceeeeeeccCCcceEEEEECCCCCEEEEeeCC----CcEEecC
Q psy15421 302 TERAGILAGHDNRVSCLGVTEDGMAVATGSWD----SFLRIWN 340 (340)
Q Consensus 302 ~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D----~~i~iW~ 340 (340)
++ ...+ .|...+.+++|||||++|+....+ +.|++||
T Consensus 392 ~~-~~~l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d 432 (706)
T 2z3z_A 392 GK-TKDL-TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTN 432 (706)
T ss_dssp CC-CEES-CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEE
T ss_pred CC-ceec-cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEE
Confidence 54 3333 367789999999999988765443 4588885
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=6.8e-24 Score=203.47 Aligned_cols=265 Identities=10% Similarity=0.060 Sum_probs=188.8
Q ss_pred EEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCee-EEeeCCC-----------------CcEEEEEECCCCCEEEEEeCCC
Q psy15421 58 IYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKV-HAIPLRS-----------------SWVMTCAYAPSGSFVACGGLDN 119 (340)
Q Consensus 58 v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~-~~~~~~~-----------------~~i~~v~~~~~~~~l~~~~~d~ 119 (340)
+..+.|. +..+++++.|+ | +||+.+++.+ ..+..+. ..+.+++|+|+ .+++.+ .++
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~ 101 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQG 101 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETT
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECC
Confidence 4557777 66788888888 8 9999988762 2222221 45899999999 665555 459
Q ss_pred eEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCC-----CceEEEEecCCCC--------
Q psy15421 120 ICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIET-----GQQCASFIGHTGD-------- 186 (340)
Q Consensus 120 ~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~-----~~~~~~~~~~~~~-------- 186 (340)
.+++|++.++. . ..+..+...+..+.|++++..++...++.|.+||+.+ ++.......+...
T Consensus 102 ~i~~~d~~~~~--~---~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 176 (706)
T 2z3z_A 102 GLVGFDMLARK--V---TYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVH 176 (706)
T ss_dssp EEEEEETTTTE--E---EEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCG
T ss_pred EEEEEECCCCc--e---EEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchh
Confidence 99999987642 1 2233445556677888887544446789999999998 7655433333332
Q ss_pred ------eEEEEEcCCCCEEEEEe---------------------------------CCCcEEEEECCCCeeeeEec--CC
Q psy15421 187 ------VMSLSLAPDMRTFVSGA---------------------------------CDASAKLWDIRDGSCKQTFP--GH 225 (340)
Q Consensus 187 ------v~~~~~~~~~~~~~sg~---------------------------------~dg~i~~wd~~~~~~~~~~~--~h 225 (340)
+.+++|+||++.+++++ .+..|.+||+.+++...... .|
T Consensus 177 ~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~ 256 (706)
T 2z3z_A 177 QREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPK 256 (706)
T ss_dssp GGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCT
T ss_pred hhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCC
Confidence 47899999999999887 45789999999887654432 46
Q ss_pred CCCeEEEEEecCCCEEEEEeCCC-----cEEEEeCcCCcEEE-Eee--cCCcccceEEEEEcC--CCcEEEEEeCCCcEE
Q psy15421 226 ESDINAVTFFPNGWAFATGSDDA-----TCRLFDIRADQELA-MYS--HDNIICGITSVAFSR--SGRLLLAGYDDFNCN 295 (340)
Q Consensus 226 ~~~v~~v~~~~~~~~l~s~s~d~-----~i~iwd~~~~~~~~-~~~--~~~~~~~i~~~~~s~--~~~~l~~g~~d~~i~ 295 (340)
...+..++|+|||+.+++++.++ .|++||..+++... ... .......+..++|+| +|++++++..|+.++
T Consensus 257 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~ 336 (706)
T 2z3z_A 257 EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNH 336 (706)
T ss_dssp TCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCE
T ss_pred ceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccE
Confidence 67799999999999999988776 89999998873322 221 111111245689999 999999999999999
Q ss_pred EEeCC-CceeeeeeccCCcceEE-EEECCCCCEEEEeeCC
Q psy15421 296 VWDSM-KTERAGILAGHDNRVSC-LGVTEDGMAVATGSWD 333 (340)
Q Consensus 296 iw~~~-~~~~~~~~~~h~~~i~~-~~~s~d~~~l~s~s~D 333 (340)
+|... ++.....+..|...+.. ++|+|||+.|+.++.+
T Consensus 337 l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 337 LYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp EEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred EEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence 99865 56667778888888876 8999999877655544
No 145
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=2.6e-22 Score=175.04 Aligned_cols=266 Identities=14% Similarity=0.179 Sum_probs=182.0
Q ss_pred CccCcEEEEEEcCCCCeEEEEeCC-CeEEEEeCC--CCCe--eEEeeCCCCcEEEEEECCCCCEEEEEeC-CCeEEEEEc
Q psy15421 53 GHLAKIYAMHWGSDSRNLVSASQD-GKLIVWDSY--TTNK--VHAIPLRSSWVMTCAYAPSGSFVACGGL-DNICSIYSL 126 (340)
Q Consensus 53 ~h~~~v~~~~~s~~~~~l~s~~~d-~~i~iwd~~--~~~~--~~~~~~~~~~i~~v~~~~~~~~l~~~~~-d~~v~i~~~ 126 (340)
.|...+.+++|+|++++|++++.+ +.|++|++. +++. +..+..+. .+..++|+|+++++++++. ++.+.+|++
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 467789999999999999988886 999999987 4443 33444444 6788999999998877665 888999999
Q ss_pred cCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEe-CCCeEEEEECCC-CceEE----EEec-CCCCeEEEEEcCCCCE
Q psy15421 127 KTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSS-GDMSCALWDIET-GQQCA----SFIG-HTGDVMSLSLAPDMRT 198 (340)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~-~d~~v~iwd~~~-~~~~~----~~~~-~~~~v~~~~~~~~~~~ 198 (340)
..+ ........+..+. .+..+.|.+++ .+++++ .++.|.+||+.+ ++... .+.. ....+..++|+|++++
T Consensus 114 ~~~-~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~ 191 (343)
T 1ri6_A 114 EDG-LPVGVVDVVEGLD-GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQY 191 (343)
T ss_dssp ETT-EEEEEEEEECCCT-TBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSE
T ss_pred CCC-ccccccccccCCC-CceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCE
Confidence 622 1222333333333 46667787765 466665 799999999987 54322 2222 3446889999999997
Q ss_pred EEE-EeCCCcEEEEECCC--Cee--eeEec----CC--CCCeEEEEEecCCCEEE-EEeCCCcEEEEeCcC--C--cEEE
Q psy15421 199 FVS-GACDASAKLWDIRD--GSC--KQTFP----GH--ESDINAVTFFPNGWAFA-TGSDDATCRLFDIRA--D--QELA 262 (340)
Q Consensus 199 ~~s-g~~dg~i~~wd~~~--~~~--~~~~~----~h--~~~v~~v~~~~~~~~l~-s~s~d~~i~iwd~~~--~--~~~~ 262 (340)
+++ +..++.|.+||+.. ++. ...+. ++ ...+..++|+|++++++ ++..++.|++||+.. + +.+.
T Consensus 192 l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~ 271 (343)
T 1ri6_A 192 AYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEG 271 (343)
T ss_dssp EEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEE
T ss_pred EEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEee
Confidence 654 45899999999953 432 22222 11 23567899999998776 555799999999972 2 2232
Q ss_pred EeecCCcccceEEEEEcCCCcEEEEEe-CCCcEEEEe--CCCce--eeeeeccCCcceEEEEECCCCC
Q psy15421 263 MYSHDNIICGITSVAFSRSGRLLLAGY-DDFNCNVWD--SMKTE--RAGILAGHDNRVSCLGVTEDGM 325 (340)
Q Consensus 263 ~~~~~~~~~~i~~~~~s~~~~~l~~g~-~d~~i~iw~--~~~~~--~~~~~~~h~~~i~~~~~s~d~~ 325 (340)
.+... ..+..++|+|++++|++++ .++.+.+|+ ..+++ .+..+.. .....+++|.|+..
T Consensus 272 ~~~~~---~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~-g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 272 FQPTE---TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV-GQGPMWVVVNAHEG 335 (343)
T ss_dssp EEECS---SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC-SSSCCEEEEEEEC-
T ss_pred eecCC---CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccccc-CCCCeeEEEEcccC
Confidence 33222 2377899999999888887 689999994 44543 3333333 24456777777543
No 146
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=4e-22 Score=174.84 Aligned_cols=262 Identities=8% Similarity=0.045 Sum_probs=176.4
Q ss_pred CCCeEEEEeC--CCCCeeE-EeeCCCCcEEEEEECCCCCEEEEEeC---CCeEEEEEccCCCCceEEEEeecCCCcceEE
Q psy15421 75 QDGKLIVWDS--YTTNKVH-AIPLRSSWVMTCAYAPSGSFVACGGL---DNICSIYSLKTREGNVRVSRELPGHTGYLSC 148 (340)
Q Consensus 75 ~d~~i~iwd~--~~~~~~~-~~~~~~~~i~~v~~~~~~~~l~~~~~---d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~ 148 (340)
.++.|.+|++ .+++... ....+...+..++|+|+|+ +++++. ++.|.+|++..+. ......+..+......
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~--~~~~~~~~~~~~~p~~ 90 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQT--AHKLNTVVAPGTPPAY 90 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTE--EEEEEEEEEESCCCSE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCc--EEEeeeeecCCCCCEE
Confidence 3566777755 3444322 2223345567789999999 555544 6899999996432 3333343445556667
Q ss_pred EEEcCCC-eEEEEe-CCCeEEEEECCC-Cc--eEEEEec---------CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy15421 149 CRFLDDN-QIVTSS-GDMSCALWDIET-GQ--QCASFIG---------HTGDVMSLSLAPDMRTFVSGACDASAKLWDIR 214 (340)
Q Consensus 149 ~~~~~~~-~l~~~~-~d~~v~iwd~~~-~~--~~~~~~~---------~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~ 214 (340)
+.+++++ .+++++ .++.+.+|++.. +. .+..+.. ....+.+++|+|+++++++...++.|.+|++.
T Consensus 91 ~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 91 VAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 7887776 466666 689999999963 22 2222221 11247889999999977777789999999998
Q ss_pred -CCeeee--EecC-CCCCeEEEEEecCCCEEEE-EeCCCcEEEEeCcC--CcE--EEEeecCCc----ccceEEEEEcCC
Q psy15421 215 -DGSCKQ--TFPG-HESDINAVTFFPNGWAFAT-GSDDATCRLFDIRA--DQE--LAMYSHDNI----ICGITSVAFSRS 281 (340)
Q Consensus 215 -~~~~~~--~~~~-h~~~v~~v~~~~~~~~l~s-~s~d~~i~iwd~~~--~~~--~~~~~~~~~----~~~i~~~~~s~~ 281 (340)
+++... .+.. ....+..++|+|+|+++++ +..++.|++|++.. ++. +........ ...+..++|+|+
T Consensus 171 ~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spd 250 (347)
T 3hfq_A 171 DAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHD 250 (347)
T ss_dssp TTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTT
T ss_pred CCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCC
Confidence 554322 2222 2336788999999996554 56788999999874 332 112211111 124788999999
Q ss_pred CcEE-EEEeCCCcEEEEeCC---CceeeeeeccCCcceEEEEECCCCCEEEEeeCC-CcEEec
Q psy15421 282 GRLL-LAGYDDFNCNVWDSM---KTERAGILAGHDNRVSCLGVTEDGMAVATGSWD-SFLRIW 339 (340)
Q Consensus 282 ~~~l-~~g~~d~~i~iw~~~---~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D-~~i~iW 339 (340)
|++| ++...++.|.+|+.. ..+.+..+..|...+..++|+|||++|++++.+ +.|.+|
T Consensus 251 G~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 251 GHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLY 313 (347)
T ss_dssp SCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEE
Confidence 9987 456678999999976 334555666677778999999999988877764 899998
No 147
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.92 E-value=6.7e-22 Score=174.42 Aligned_cols=264 Identities=11% Similarity=0.070 Sum_probs=178.2
Q ss_pred eCCCeEEEEeC--CCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCC----CeEEEEEccCCCCceEEEEeecCCCcceE
Q psy15421 74 SQDGKLIVWDS--YTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLD----NICSIYSLKTREGNVRVSRELPGHTGYLS 147 (340)
Q Consensus 74 ~~d~~i~iwd~--~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d----~~v~i~~~~~~~~~~~~~~~~~~~~~~v~ 147 (340)
+.++.|++|.+ .+++.......+...+..++|+|++++|++++.+ +.+.+|++....+..........+.....
T Consensus 24 ~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~ 103 (361)
T 3scy_A 24 GNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPC 103 (361)
T ss_dssp SSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEE
T ss_pred CCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcE
Confidence 34678999865 4555432222255566778999999999998886 79999999765455444444444444455
Q ss_pred EEEEcCCCeEEEEe-CCCeEEEEECCCCceEE---EEecC-----------CCCeEEEEEcCCCCEEEE-EeCCCcEEEE
Q psy15421 148 CCRFLDDNQIVTSS-GDMSCALWDIETGQQCA---SFIGH-----------TGDVMSLSLAPDMRTFVS-GACDASAKLW 211 (340)
Q Consensus 148 ~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~---~~~~~-----------~~~v~~~~~~~~~~~~~s-g~~dg~i~~w 211 (340)
.+.+ ++..+++++ .++.+.+|++.....+. ....+ ...+.+++|+|+++++++ +..++.|.+|
T Consensus 104 ~~~~-dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~ 182 (361)
T 3scy_A 104 YLTT-NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKF 182 (361)
T ss_dssp EEEE-CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EEEE-CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEE
Confidence 5556 555565555 58899999997543221 11111 223578999999996655 4468999999
Q ss_pred ECCCCe-------e------eeEecCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEeCcCCcEE--EEeec-CCcccceE
Q psy15421 212 DIRDGS-------C------KQTFPGHESDINAVTFFPNGWAFATGS-DDATCRLFDIRADQEL--AMYSH-DNIICGIT 274 (340)
Q Consensus 212 d~~~~~-------~------~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~~~~~--~~~~~-~~~~~~i~ 274 (340)
++.... . ......+...+..++|+|+|+++++++ .++.|.+||+.++... ..... ......+.
T Consensus 183 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~ 262 (361)
T 3scy_A 183 NINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSG 262 (361)
T ss_dssp EECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEE
T ss_pred EEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcc
Confidence 887543 1 111223445678999999999877766 6899999999865432 22211 11123467
Q ss_pred EEEEcCCCcEEEEEeC--CCcEEEEeCC--Cce--eeeeeccCCcceEEEEECCCCCEEEEee-CCCcEEec
Q psy15421 275 SVAFSRSGRLLLAGYD--DFNCNVWDSM--KTE--RAGILAGHDNRVSCLGVTEDGMAVATGS-WDSFLRIW 339 (340)
Q Consensus 275 ~~~~s~~~~~l~~g~~--d~~i~iw~~~--~~~--~~~~~~~h~~~i~~~~~s~d~~~l~s~s-~D~~i~iW 339 (340)
.++|+|||++|+++.. ++.|.+|+.. +++ .+..+.. ...+..++|+|||++|++++ .++.|.+|
T Consensus 263 ~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~ 333 (361)
T 3scy_A 263 DIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIF 333 (361)
T ss_dssp EEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEE
T ss_pred cEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEE
Confidence 8999999999876665 4899999974 333 3444443 45788999999999888877 67889986
No 148
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=9.9e-22 Score=170.97 Aligned_cols=270 Identities=12% Similarity=0.096 Sum_probs=185.6
Q ss_pred EeEEecCccCcEEEEEEcCCCCeEEEEeC-CCeEEEEeCCCCCe-eEEeeCCCCcEEEEEECCCCCEEEEEeCCC---eE
Q psy15421 47 TRRTLRGHLAKIYAMHWGSDSRNLVSASQ-DGKLIVWDSYTTNK-VHAIPLRSSWVMTCAYAPSGSFVACGGLDN---IC 121 (340)
Q Consensus 47 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-d~~i~iwd~~~~~~-~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~---~v 121 (340)
....+..+.... .++|+|+++++++++. ++.|.+||..+++. ...+..+..+..+++|+|++++++++..++ .|
T Consensus 32 ~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i 110 (331)
T 3u4y_A 32 ILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNM 110 (331)
T ss_dssp EEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEE
T ss_pred eeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccE
Confidence 344455556667 9999999997666655 89999999998887 666666666655589999999999655553 89
Q ss_pred EEEEccCCCCceEEEEeecCCCcceEEEEEcCCCe-EE-EEeCCCe-EEEEECCCCceE----EEEecCCCCeEEEEEcC
Q psy15421 122 SIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IV-TSSGDMS-CALWDIETGQQC----ASFIGHTGDVMSLSLAP 194 (340)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~d~~-v~iwd~~~~~~~----~~~~~~~~~v~~~~~~~ 194 (340)
.+|++.+++ ....++.+. ....+.|++++. ++ +...++. +.+|++.....+ .........+..++|+|
T Consensus 111 ~v~d~~~~~----~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~sp 185 (331)
T 3u4y_A 111 QSYSFLKNK----FISTIPIPY-DAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTP 185 (331)
T ss_dssp EEEETTTTE----EEEEEECCT-TEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECT
T ss_pred EEEECCCCC----eEEEEECCC-CccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECC
Confidence 999987643 222333332 346778887763 44 4455678 999998754332 22223455689999999
Q ss_pred CCCEEE-EEeCCCcEEEEECCCCee---eeEecCCCCCeEEEEEecCCCEEEEE-eCCCcEEEEeCcCCcE--EEEeecC
Q psy15421 195 DMRTFV-SGACDASAKLWDIRDGSC---KQTFPGHESDINAVTFFPNGWAFATG-SDDATCRLFDIRADQE--LAMYSHD 267 (340)
Q Consensus 195 ~~~~~~-sg~~dg~i~~wd~~~~~~---~~~~~~h~~~v~~v~~~~~~~~l~s~-s~d~~i~iwd~~~~~~--~~~~~~~ 267 (340)
++++++ ++..++.|.+||+++++. +..+..+ ..+..++|+|+|++++.+ ..++.|.+||..+++. +..+...
T Consensus 186 dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~ 264 (331)
T 3u4y_A 186 DGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHG 264 (331)
T ss_dssp TSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECC
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccc
Confidence 999554 555789999999998887 6677643 567889999999966554 4578899999987765 3222211
Q ss_pred -----CcccceEEEEEcCCCcEEEEEe-CCCcEEEEeCCCceeeeeeccCCcceEEEEECCCC
Q psy15421 268 -----NIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG 324 (340)
Q Consensus 268 -----~~~~~i~~~~~s~~~~~l~~g~-~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~ 324 (340)
........++|+|++++|++++ .++.|.+|++.... .....+.+..-....++|++
T Consensus 265 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~-~~~~~~~~~~g~~~~~~~~~ 326 (331)
T 3u4y_A 265 LLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV-VGYVAGIEANGGIAICHPDK 326 (331)
T ss_dssp CCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE-EEECTTCCCBSCEEECCCC-
T ss_pred cccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc-ccceecccccCCeEEECCcc
Confidence 1112235689999999886655 56799999986543 33344443333334456654
No 149
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=7.5e-23 Score=196.67 Aligned_cols=275 Identities=8% Similarity=0.048 Sum_probs=189.2
Q ss_pred eEEecCccC---cEEEEEEcCCCCeEEEEeCC---------CeEEEEeCCCCCeeEEee---CCCCcEEEEEECCCCCEE
Q psy15421 48 RRTLRGHLA---KIYAMHWGSDSRNLVSASQD---------GKLIVWDSYTTNKVHAIP---LRSSWVMTCAYAPSGSFV 112 (340)
Q Consensus 48 ~~~~~~h~~---~v~~~~~s~~~~~l~s~~~d---------~~i~iwd~~~~~~~~~~~---~~~~~i~~v~~~~~~~~l 112 (340)
++.+.+|.. .|.+++|||||++|++++.+ +.+++||+.+++. ..+. .+...+..++|+|||++|
T Consensus 50 ~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~l 128 (723)
T 1xfd_A 50 TVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQL 128 (723)
T ss_dssp EEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCE
T ss_pred EEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEE
Confidence 456666665 49999999999999999875 7888999988775 2222 333447788999999999
Q ss_pred EEEeCCCeEEEEEccCCCCceEEEEeecCCCc------------------ceEEEEEcCCC-eEEEEeCCC---------
Q psy15421 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHTG------------------YLSCCRFLDDN-QIVTSSGDM--------- 164 (340)
Q Consensus 113 ~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~-~l~~~~~d~--------- 164 (340)
+.++. +.+.+|++.++... . ....+.. .+..+.|++++ .|+.++.|.
T Consensus 129 a~~~~-~~i~~~~~~~g~~~-~---~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~ 203 (723)
T 1xfd_A 129 IFIFE-NNIYYCAHVGKQAI-R---VVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELP 203 (723)
T ss_dssp EEEET-TEEEEESSSSSCCE-E---EECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEEC
T ss_pred EEEEC-CeEEEEECCCCceE-E---EecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEee
Confidence 98876 78999998764321 1 1122221 22578888876 466665432
Q ss_pred -------------------------eEEEEECCCCceEEEEecC------CCCeEEEEEcCCCCEEEEEeC----CCcEE
Q psy15421 165 -------------------------SCALWDIETGQQCASFIGH------TGDVMSLSLAPDMRTFVSGAC----DASAK 209 (340)
Q Consensus 165 -------------------------~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~sg~~----dg~i~ 209 (340)
.|.+||+.+++....+..+ ...+..++|+||++++++.+. +..|.
T Consensus 204 ~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~ 283 (723)
T 1xfd_A 204 TYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILT 283 (723)
T ss_dssp CCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEE
T ss_pred ccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEE
Confidence 7999999988754555543 557889999999998876543 46899
Q ss_pred EEECCCCeeeeEecC-CCCCeE----EEEEecCCCEEEE--EeCCC------cEEEEe-CcCCcE--EEEeecCCcccce
Q psy15421 210 LWDIRDGSCKQTFPG-HESDIN----AVTFFPNGWAFAT--GSDDA------TCRLFD-IRADQE--LAMYSHDNIICGI 273 (340)
Q Consensus 210 ~wd~~~~~~~~~~~~-h~~~v~----~v~~~~~~~~l~s--~s~d~------~i~iwd-~~~~~~--~~~~~~~~~~~~i 273 (340)
+||+.++++...+.. +...+. .++|+|||+.|+. +..++ .|++|| ...+.. ...+.... ..+
T Consensus 284 ~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~--~~~ 361 (723)
T 1xfd_A 284 LCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGD--WDV 361 (723)
T ss_dssp EEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSS--SCE
T ss_pred EEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCC--eEE
Confidence 999999887665543 333333 7899999997664 55677 577777 333330 22222111 124
Q ss_pred EE-EEEcCCCcEEEEEeCC---CcEEEEeCCCc--eeeeeecc---CCcceEEEEECCCCCEEEEe
Q psy15421 274 TS-VAFSRSGRLLLAGYDD---FNCNVWDSMKT--ERAGILAG---HDNRVSCLGVTEDGMAVATG 330 (340)
Q Consensus 274 ~~-~~~s~~~~~l~~g~~d---~~i~iw~~~~~--~~~~~~~~---h~~~i~~~~~s~d~~~l~s~ 330 (340)
.. ++|+|+|+.|+..+.+ +.+++|+.... .....+.. |...+..++|||||++|+..
T Consensus 362 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 362 TKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLK 427 (723)
T ss_dssp EEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEE
T ss_pred EeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEE
Confidence 33 6899999999766554 78999986532 12333443 67788999999999987753
No 150
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.91 E-value=2.9e-22 Score=178.23 Aligned_cols=286 Identities=14% Similarity=0.017 Sum_probs=194.1
Q ss_pred EeEEecCccCcEEE-----EEEcCCCCeEEEEeC-CCe--EEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCC
Q psy15421 47 TRRTLRGHLAKIYA-----MHWGSDSRNLVSASQ-DGK--LIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLD 118 (340)
Q Consensus 47 ~~~~~~~h~~~v~~-----~~~s~~~~~l~s~~~-d~~--i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d 118 (340)
..+.|..|...... .+|+|||++|+.++. ++. |.+||+.+++.......+...+....|+||+++|+.++.+
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~ 101 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG 101 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC
Confidence 34567777766666 889999999998887 674 8888998887766666665555566899999999999999
Q ss_pred CeEEEEEccCCCCceEEEEeecCCCcceEEEE--EcCCCeEEEE-----------------------eCCCeEEEEECCC
Q psy15421 119 NICSIYSLKTREGNVRVSRELPGHTGYLSCCR--FLDDNQIVTS-----------------------SGDMSCALWDIET 173 (340)
Q Consensus 119 ~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~l~~~-----------------------~~d~~v~iwd~~~ 173 (340)
+.+.+|++.+++.. ... ..+...+.... +.+++.++.+ ..+..|.+||+.+
T Consensus 102 ~~l~~~d~~~g~~~--~~~--~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 177 (388)
T 3pe7_A 102 RNLMRVDLATLEEN--VVY--QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT 177 (388)
T ss_dssp TEEEEEETTTCCEE--EEE--ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT
T ss_pred CeEEEEECCCCcce--eee--echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCC
Confidence 99999999865422 222 22333332222 2455544432 2347799999998
Q ss_pred CceEEEEecCCCCeEEEEEcC-CCCEEEEEeCC------CcEEEEECCCCeeeeEecCCC--CCeEEEEEecCCCEEEEE
Q psy15421 174 GQQCASFIGHTGDVMSLSLAP-DMRTFVSGACD------ASAKLWDIRDGSCKQTFPGHE--SDINAVTFFPNGWAFATG 244 (340)
Q Consensus 174 ~~~~~~~~~~~~~v~~~~~~~-~~~~~~sg~~d------g~i~~wd~~~~~~~~~~~~h~--~~v~~v~~~~~~~~l~s~ 244 (340)
++. ..+..+...+..++|+| +++.++..+.+ ..|.++|...+.. ..+..+. ..+..++|+|||+.|+..
T Consensus 178 g~~-~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~ 255 (388)
T 3pe7_A 178 GES-TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYV 255 (388)
T ss_dssp CCE-EEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEE
T ss_pred Cce-EEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEE
Confidence 864 44555667789999999 99988776653 3788888765543 3343343 357788999999977654
Q ss_pred eCC-C----cEEEEeCcCCcEEEEeecCCcc---cceEEEEEcCCCcEEEEE---------eCCCcEEEEeCCCceeeee
Q psy15421 245 SDD-A----TCRLFDIRADQELAMYSHDNII---CGITSVAFSRSGRLLLAG---------YDDFNCNVWDSMKTERAGI 307 (340)
Q Consensus 245 s~d-~----~i~iwd~~~~~~~~~~~~~~~~---~~i~~~~~s~~~~~l~~g---------~~d~~i~iw~~~~~~~~~~ 307 (340)
+.+ + .|++||+.+++........... .......|+|||+.|+.. ..+..|++||..+++. ..
T Consensus 256 ~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~ 334 (388)
T 3pe7_A 256 SYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HR 334 (388)
T ss_dssp EEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-EE
T ss_pred ecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EE
Confidence 432 2 3999999877643322212100 001123799999988854 4567899999887654 44
Q ss_pred eccCCc-----------ceEEEEECCCCCEEEEee-CCCcEEec
Q psy15421 308 LAGHDN-----------RVSCLGVTEDGMAVATGS-WDSFLRIW 339 (340)
Q Consensus 308 ~~~h~~-----------~i~~~~~s~d~~~l~s~s-~D~~i~iW 339 (340)
+..|.. .+.+++|||||+.|+..+ .++...||
T Consensus 335 l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~ 378 (388)
T 3pe7_A 335 VARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALY 378 (388)
T ss_dssp EEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEE
T ss_pred eccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEE
Confidence 555655 578899999999888666 47777776
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.90 E-value=2.4e-20 Score=164.39 Aligned_cols=263 Identities=11% Similarity=0.114 Sum_probs=178.2
Q ss_pred ccCcEEEEEEcCCCCeEEEEeCC----CeEEEEeCCC--CC--eeEEeeCCCCcEEEEEECCCCCEEEEEe-CCCeEEEE
Q psy15421 54 HLAKIYAMHWGSDSRNLVSASQD----GKLIVWDSYT--TN--KVHAIPLRSSWVMTCAYAPSGSFVACGG-LDNICSIY 124 (340)
Q Consensus 54 h~~~v~~~~~s~~~~~l~s~~~d----~~i~iwd~~~--~~--~~~~~~~~~~~i~~v~~~~~~~~l~~~~-~d~~v~i~ 124 (340)
|......++|+||+++|++++.+ +.|.+|++.. ++ .+.....+......+++ +++++++++ .++.+.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 67778889999999999999886 8999998765 33 22334444555666777 788777766 57899999
Q ss_pred EccCCCCceEEEE--eecC--------CCcceEEEEEcCCCe-EEEE-eCCCeEEEEECCCCce------E-------EE
Q psy15421 125 SLKTREGNVRVSR--ELPG--------HTGYLSCCRFLDDNQ-IVTS-SGDMSCALWDIETGQQ------C-------AS 179 (340)
Q Consensus 125 ~~~~~~~~~~~~~--~~~~--------~~~~v~~~~~~~~~~-l~~~-~~d~~v~iwd~~~~~~------~-------~~ 179 (340)
++........... ...+ +...+..+.|++++. ++.+ ..++.|.+|++..... + ..
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 9975322111111 1111 122346678888764 5444 4588999998875431 1 11
Q ss_pred EecCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCee--eeEe---cCCCCCeEEEEEecCCCEEEEEeCC--CcEE
Q psy15421 180 FIGHTGDVMSLSLAPDMRTFVSGA-CDASAKLWDIRDGSC--KQTF---PGHESDINAVTFFPNGWAFATGSDD--ATCR 251 (340)
Q Consensus 180 ~~~~~~~v~~~~~~~~~~~~~sg~-~dg~i~~wd~~~~~~--~~~~---~~h~~~v~~v~~~~~~~~l~s~s~d--~~i~ 251 (340)
...+...+..++|+|+++++++++ .++.|.+||+.++.. ...+ ..+......++|+|+|++++++..+ +.|.
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~ 285 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVA 285 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEE
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEE
Confidence 223455688999999999877666 699999999987754 2222 2334557899999999988666654 8999
Q ss_pred EEeCc--CCc--EEEEeecCCcccceEEEEEcCCCcEEEEEe-CCCcEEEEe--CCCceeeeee-ccCCcceEEEEEC
Q psy15421 252 LFDIR--ADQ--ELAMYSHDNIICGITSVAFSRSGRLLLAGY-DDFNCNVWD--SMKTERAGIL-AGHDNRVSCLGVT 321 (340)
Q Consensus 252 iwd~~--~~~--~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~-~d~~i~iw~--~~~~~~~~~~-~~h~~~i~~~~~s 321 (340)
+|++. +++ .+..+.. ...+..++|+|+|++|+++. .++.|.+|+ ..+++..... ..+...+.|++|.
T Consensus 286 v~~~~~~~g~~~~~~~~~~---g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 286 IFKVDETNGTLTKVGYQLT---GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEECTTTCCEEEEEEEEC---SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEcCCCCcEEEeeEecC---CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 99986 333 2222222 23477899999999888887 678999964 4456554433 2355678899886
No 152
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=2.9e-21 Score=168.94 Aligned_cols=259 Identities=10% Similarity=0.041 Sum_probs=179.8
Q ss_pred EEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCC-CcEEEEEECCCCCEEE-EEeCCCeEEEEEccCCCCceEEEE
Q psy15421 60 AMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRS-SWVMTCAYAPSGSFVA-CGGLDNICSIYSLKTREGNVRVSR 137 (340)
Q Consensus 60 ~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~i~~v~~~~~~~~l~-~~~~d~~v~i~~~~~~~~~~~~~~ 137 (340)
.+++++++.++++++.+++|++||..+++.+..+..+. ..+..++|+|++++++ ++..++.|.+|++.++. ...
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~----~~~ 79 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK----NTF 79 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE----EEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc----EEE
Confidence 45677888899999999999999999988877776554 1467889999998665 45568899999987643 122
Q ss_pred eec-CC-----CcceEEEEEcCCC-eEEEEeCC------------CeEEEEECCCCce---EEEEecCCCCeEEEEEcCC
Q psy15421 138 ELP-GH-----TGYLSCCRFLDDN-QIVTSSGD------------MSCALWDIETGQQ---CASFIGHTGDVMSLSLAPD 195 (340)
Q Consensus 138 ~~~-~~-----~~~v~~~~~~~~~-~l~~~~~d------------~~v~iwd~~~~~~---~~~~~~~~~~v~~~~~~~~ 195 (340)
.+. .+ ...+..+.|++++ .+++++.+ +.|.+||+.+++. +..+. +...+.+++|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~d 158 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADD 158 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTT
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCC
Confidence 222 12 1225566787766 56666544 8999999988543 23333 3446889999999
Q ss_pred CCEEEEEeCCCcEEEEECCCCeeeeEecCCCC------------------------CeEEEEEecCCCE-----------
Q psy15421 196 MRTFVSGACDASAKLWDIRDGSCKQTFPGHES------------------------DINAVTFFPNGWA----------- 240 (340)
Q Consensus 196 ~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~------------------------~v~~v~~~~~~~~----------- 240 (340)
++ +++++ +.|.+||..+++....++.+.. ...++++++++..
T Consensus 159 g~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 235 (349)
T 1jmx_B 159 GS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGY 235 (349)
T ss_dssp SC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEE
T ss_pred Cc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeE
Confidence 99 55544 4499999999887776653320 2345666655421
Q ss_pred EEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcC-CCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEE
Q psy15421 241 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLG 319 (340)
Q Consensus 241 l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~ 319 (340)
+.....++.+++|+.. .....+..++|+| ++++++++ ++.|.+||..+++.+..+.. ...+.+++
T Consensus 236 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~ 301 (349)
T 1jmx_B 236 LSVDLKTGKTHTQEFA-----------DLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVA 301 (349)
T ss_dssp EEEETTTCCEEEEEEE-----------ECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEE
T ss_pred EEEeccCCcEEecccc-----------cCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceE
Confidence 1122223344444331 1122477899999 99999988 78999999998887776643 34578999
Q ss_pred ECCCCCEEEEeeCCCcEEecC
Q psy15421 320 VTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 320 ~s~d~~~l~s~s~D~~i~iW~ 340 (340)
|+|||++|++++.++.|++||
T Consensus 302 ~s~dg~~l~~~~~~~~v~v~d 322 (349)
T 1jmx_B 302 FDKKGDKLYLGGTFNDLAVFN 322 (349)
T ss_dssp ECSSSSCEEEESBSSEEEEEE
T ss_pred ECCCCCEEEEecCCCeEEEEe
Confidence 999999888888899999996
No 153
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=3.7e-22 Score=180.34 Aligned_cols=202 Identities=10% Similarity=0.084 Sum_probs=156.5
Q ss_pred cCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCC----------CeeEE-----eeCCCCcEEEEEECCCCCEEE----EE
Q psy15421 55 LAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTT----------NKVHA-----IPLRSSWVMTCAYAPSGSFVA----CG 115 (340)
Q Consensus 55 ~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~----------~~~~~-----~~~~~~~i~~v~~~~~~~~l~----~~ 115 (340)
...+..+++++++.++++++.|+ +++|+.... ..+.. .-.+...|.+++|+|++++|+ +|
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 44688999999999999999988 888864210 01111 112355799999999999999 78
Q ss_pred eCCCeEEEEEccCC-----C--CceEEEEeecCCCcceEEEEEcCC--CeEEEEeCCCeEEEEECCCCceEEEEecCCCC
Q psy15421 116 GLDNICSIYSLKTR-----E--GNVRVSRELPGHTGYLSCCRFLDD--NQIVTSSGDMSCALWDIETGQQCASFIGHTGD 186 (340)
Q Consensus 116 ~~d~~v~i~~~~~~-----~--~~~~~~~~~~~~~~~v~~~~~~~~--~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~ 186 (340)
+.|+.|++||+.+. . ........+.+|...|.++.|+++ ..|++++.|++|++||++++.......+|...
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~ 194 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVA 194 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGC
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCc
Confidence 89999999998653 1 111223456679999999999875 46888999999999999998777677788999
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEecCC-------CCCeEEEEEecCCCEEEE-EeCCC------cEEE
Q psy15421 187 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGH-------ESDINAVTFFPNGWAFAT-GSDDA------TCRL 252 (340)
Q Consensus 187 v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h-------~~~v~~v~~~~~~~~l~s-~s~d~------~i~i 252 (340)
+.+++|+|+++++++|+.||+|++||++ ++....+..| ...|.+++|++++.++++ ...|| .+++
T Consensus 195 v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i 273 (434)
T 2oit_A 195 VTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVM 273 (434)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEE
T ss_pred eeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEE
Confidence 9999999999999999999999999998 5555555433 337899999998877654 33443 3899
Q ss_pred EeCcCC
Q psy15421 253 FDIRAD 258 (340)
Q Consensus 253 wd~~~~ 258 (340)
|+++..
T Consensus 274 ~~l~~~ 279 (434)
T 2oit_A 274 ALLPKK 279 (434)
T ss_dssp EECCCT
T ss_pred EEeccC
Confidence 998754
No 154
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=2e-21 Score=169.07 Aligned_cols=242 Identities=13% Similarity=0.080 Sum_probs=179.5
Q ss_pred cEEEEEEcCCCCeE-EEEeCCCeEEEEeCCCCCeeEEeeCCC-----CcEEEEEECCCCCEEEEEe------------CC
Q psy15421 57 KIYAMHWGSDSRNL-VSASQDGKLIVWDSYTTNKVHAIPLRS-----SWVMTCAYAPSGSFVACGG------------LD 118 (340)
Q Consensus 57 ~v~~~~~s~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~-----~~i~~v~~~~~~~~l~~~~------------~d 118 (340)
.+..++|+|+++.+ ++++.++.|.+||+.+++.+..+.... ..+..++|+|++++++++. .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 47889999999765 556668999999999988876665422 1456789999999998886 57
Q ss_pred CeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCe-EEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCC
Q psy15421 119 NICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMR 197 (340)
Q Consensus 119 ~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 197 (340)
+.+.+|++.++. ....+.. ...+..+.|++++. ++.+ ++.|.+||+.+++....+..+.. ...+.|+|+++
T Consensus 115 ~~i~v~d~~~~~----~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~ 186 (337)
T 1pby_B 115 TRVALYDAETLS----RRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSW-EAETYAQPDVL 186 (337)
T ss_dssp CEEEEEETTTTE----EEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTT-TTTTBCCCBCC
T ss_pred ceEEEEECCCCc----EEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeecccc-CCCceeCCCcc
Confidence 999999986542 2222222 22345566777664 5555 68999999999887766654431 11237889888
Q ss_pred EEEEEeC-CC-----------------------cEEEEECCCCeee-eEecCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy15421 198 TFVSGAC-DA-----------------------SAKLWDIRDGSCK-QTFPGHESDINAVTFFPNGWAFATGSDDATCRL 252 (340)
Q Consensus 198 ~~~sg~~-dg-----------------------~i~~wd~~~~~~~-~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~i 252 (340)
.++..+. ++ .|.+||+++++.. ..+..+...+.+++|+|++++++++ ++.|++
T Consensus 187 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~ 264 (337)
T 1pby_B 187 AVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLES 264 (337)
T ss_dssp CCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEE
T ss_pred EEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEE
Confidence 6654433 33 4689999988764 2344566678899999999998888 799999
Q ss_pred EeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccC
Q psy15421 253 FDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH 311 (340)
Q Consensus 253 wd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h 311 (340)
||+.+.+.+..+... ..+.+++|+|++++|++++.++.|++||..+++.+..+..+
T Consensus 265 ~d~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 265 FDLEKNASIKRVPLP---HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp EETTTTEEEEEEECS---SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred EECCCCcCcceecCC---CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 999988776665433 24678999999999999999999999999988887776544
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.90 E-value=1.1e-20 Score=165.52 Aligned_cols=250 Identities=11% Similarity=0.128 Sum_probs=170.3
Q ss_pred ecCccCcEEEEEEcCCCCeEEEEeC---CCeEEEEeCCCCC--eeEEeeCCCCcEEEEEECCCCCEEEEEe-CCCeEEEE
Q psy15421 51 LRGHLAKIYAMHWGSDSRNLVSASQ---DGKLIVWDSYTTN--KVHAIPLRSSWVMTCAYAPSGSFVACGG-LDNICSIY 124 (340)
Q Consensus 51 ~~~h~~~v~~~~~s~~~~~l~s~~~---d~~i~iwd~~~~~--~~~~~~~~~~~i~~v~~~~~~~~l~~~~-~d~~v~i~ 124 (340)
...+......++|+||++ |++++. ++.|++||+.+++ .+..+..+...+..++|+|++++|++++ .++.+.+|
T Consensus 35 ~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~ 113 (347)
T 3hfq_A 35 LLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVM 113 (347)
T ss_dssp EEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 344556778899999999 555554 6899999997655 2334344556678899999999988887 67899999
Q ss_pred EccCCCCceEEEEeecC---------CCcceEEEEEcCCCeEEE-EeCCCeEEEEECC-CCceE--EEEecC-CCCeEEE
Q psy15421 125 SLKTREGNVRVSRELPG---------HTGYLSCCRFLDDNQIVT-SSGDMSCALWDIE-TGQQC--ASFIGH-TGDVMSL 190 (340)
Q Consensus 125 ~~~~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~l~~-~~~d~~v~iwd~~-~~~~~--~~~~~~-~~~v~~~ 190 (340)
++... +.......+.. +...+..+.|++++.+++ ...++.|.+|++. .++.. ..+..+ ...+..+
T Consensus 114 ~~~~~-g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~ 192 (347)
T 3hfq_A 114 KIAAD-GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHL 192 (347)
T ss_dssp EECTT-SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEE
T ss_pred EeCCC-CCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceE
Confidence 99642 22222222221 122466788887765544 4458899999998 45432 222222 3367889
Q ss_pred EEcCCCCEEEE-EeCCCcEEEEECCC--Cee--eeEecCCC------CCeEEEEEecCCCEE-EEEeCCCcEEEEeCcCC
Q psy15421 191 SLAPDMRTFVS-GACDASAKLWDIRD--GSC--KQTFPGHE------SDINAVTFFPNGWAF-ATGSDDATCRLFDIRAD 258 (340)
Q Consensus 191 ~~~~~~~~~~s-g~~dg~i~~wd~~~--~~~--~~~~~~h~------~~v~~v~~~~~~~~l-~s~s~d~~i~iwd~~~~ 258 (340)
+|+|+++++++ +..++.|.+|++.. ++. ...+.... ..+..++|+|+|+++ ++...++.|.+|++...
T Consensus 193 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~ 272 (347)
T 3hfq_A 193 VFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD 272 (347)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC
Confidence 99999996554 66789999999874 543 22332222 347889999999976 56677899999998732
Q ss_pred ---cEEEEeecCCcccceEEEEEcCCCcEEEEEeC-CCcEEEE--eCCCcee
Q psy15421 259 ---QELAMYSHDNIICGITSVAFSRSGRLLLAGYD-DFNCNVW--DSMKTER 304 (340)
Q Consensus 259 ---~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~-d~~i~iw--~~~~~~~ 304 (340)
+.+..+.. ....+..++|+|+|++|+++.. ++.+.+| |..+++.
T Consensus 273 g~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 273 GHLTLIQQIST--EGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp GCEEEEEEEEC--SSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred CcEEEeEEEec--CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 22222222 1224678999999998888775 4899999 5455544
No 156
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=1.1e-20 Score=165.59 Aligned_cols=236 Identities=8% Similarity=-0.031 Sum_probs=178.2
Q ss_pred CcEEEEEECCCCCEEEEEeC-------CCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEE-EEeCCCeEEE
Q psy15421 98 SWVMTCAYAPSGSFVACGGL-------DNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIV-TSSGDMSCAL 168 (340)
Q Consensus 98 ~~i~~v~~~~~~~~l~~~~~-------d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~-~~~~d~~v~i 168 (340)
..+..++|+|+++++++++. ++.|.+||..+++. ...++.. .....+.+.+++ .++ +...++.|.+
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~----~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~ 115 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEV----TQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTA 115 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCE----EEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeE----EEEEecC-CCcceEEECCCCCEEEEEecCCCEEEE
Confidence 44678999999998888774 56899999876542 2222211 223445666654 344 4555899999
Q ss_pred EECCCCceEEEEecCCCC---------eEEEEEcCCCCEEEEEe--CCCcEEEEECCCCeeeeEecCCCCCeEEEEEecC
Q psy15421 169 WDIETGQQCASFIGHTGD---------VMSLSLAPDMRTFVSGA--CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN 237 (340)
Q Consensus 169 wd~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~~sg~--~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~ 237 (340)
||+.+++....+..+... +.+++|+|+++.+++++ .++.|.+||.++++....++.+...+.+++|+|+
T Consensus 116 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d 195 (353)
T 3vgz_A 116 IDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSE 195 (353)
T ss_dssp EETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETT
T ss_pred EeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCC
Confidence 999999887777654332 68899999999777665 5889999999999988888766666889999999
Q ss_pred CCEEEEEeCCCcEEEEeCcCCcEEEEeecC--CcccceEEEEEcCCCcEEEEEeC-CCcEEEEeCCCceeeeeeccCCcc
Q psy15421 238 GWAFATGSDDATCRLFDIRADQELAMYSHD--NIICGITSVAFSRSGRLLLAGYD-DFNCNVWDSMKTERAGILAGHDNR 314 (340)
Q Consensus 238 ~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~g~~-d~~i~iw~~~~~~~~~~~~~h~~~ 314 (340)
++++++++.++.|.+||..+.+.+..+... .....+..++|+|++++++++.. ++.|.+||..+++....+..+.
T Consensus 196 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-- 273 (353)
T 3vgz_A 196 GKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE-- 273 (353)
T ss_dssp TTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--
T ss_pred CCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--
Confidence 999999999999999999988776655431 12234778999999997776664 5999999998888777665433
Q ss_pred eEEEEECCCCCEEE-EeeCCCcEEecC
Q psy15421 315 VSCLGVTEDGMAVA-TGSWDSFLRIWN 340 (340)
Q Consensus 315 i~~~~~s~d~~~l~-s~s~D~~i~iW~ 340 (340)
-..++|+|||++++ +...++.|.+||
T Consensus 274 ~~~~~~s~dg~~l~v~~~~~~~v~~~d 300 (353)
T 3vgz_A 274 SLAVLFNPARNEAYVTHRQAGKVSVID 300 (353)
T ss_dssp CCCEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CceEEECCCCCEEEEEECCCCeEEEEE
Confidence 25699999999554 555789999996
No 157
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=3.5e-22 Score=180.53 Aligned_cols=217 Identities=15% Similarity=0.091 Sum_probs=158.6
Q ss_pred CeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCC-------CCceEEEE----eecCCCcc
Q psy15421 77 GKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTR-------EGNVRVSR----ELPGHTGY 145 (340)
Q Consensus 77 ~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~-------~~~~~~~~----~~~~~~~~ 145 (340)
+.+++|+.... .....+..+++++++.++++++.++ +++|+.... +....... ....+...
T Consensus 23 ~~vri~~~~~~-------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 23 KKVRIFDSPEE-------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CEEECSCCCSS-------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeEEecCCccc-------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 46888864311 1234467788999999999999888 888875421 00000000 11135567
Q ss_pred eEEEEEcCCC-eEE----EEeCCCeEEEEECCCC--------ce---EEEEecCCCCeEEEEEcCC-CCEEEEEeCCCcE
Q psy15421 146 LSCCRFLDDN-QIV----TSSGDMSCALWDIETG--------QQ---CASFIGHTGDVMSLSLAPD-MRTFVSGACDASA 208 (340)
Q Consensus 146 v~~~~~~~~~-~l~----~~~~d~~v~iwd~~~~--------~~---~~~~~~~~~~v~~~~~~~~-~~~~~sg~~dg~i 208 (340)
+.++.|++++ .|+ +++.|+.|++||+.++ +. ...+.+|...|.+++|+|+ +.++++++.||+|
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v 174 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSI 174 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeE
Confidence 8999998775 455 5677999999998764 11 3445568999999999998 7899999999999
Q ss_pred EEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEee-cCC----cccceEEEEEcCCCc
Q psy15421 209 KLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS-HDN----IICGITSVAFSRSGR 283 (340)
Q Consensus 209 ~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~----~~~~i~~~~~s~~~~ 283 (340)
++||++++.......+|...|.+++|+|+|.+|++|+.||.|++||.+ .+....+. +.. +...+.++.|++++.
T Consensus 175 ~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~ 253 (434)
T 2oit_A 175 AVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYV 253 (434)
T ss_dssp EEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTE
T ss_pred EEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCce
Confidence 999999987776677789999999999999999999999999999998 33333332 111 123689999999988
Q ss_pred EEEEE-eCCC------cEEEEeCCCc
Q psy15421 284 LLLAG-YDDF------NCNVWDSMKT 302 (340)
Q Consensus 284 ~l~~g-~~d~------~i~iw~~~~~ 302 (340)
++++. ..+| .+++|++.+.
T Consensus 254 ~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 254 FAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEEccCCCccCCCCceEEEEeccC
Confidence 87653 3443 3889997654
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.89 E-value=1.6e-22 Score=194.43 Aligned_cols=273 Identities=11% Similarity=0.021 Sum_probs=186.4
Q ss_pred EEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCC---cEEEEEECCCCCEEEEEeC---------CCeEEEEEcc
Q psy15421 60 AMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSS---WVMTCAYAPSGSFVACGGL---------DNICSIYSLK 127 (340)
Q Consensus 60 ~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~---~i~~v~~~~~~~~l~~~~~---------d~~v~i~~~~ 127 (340)
+++|+||+.++ ..+.|++|++||+.+++....+..+.. .+..++|||||++|++++. ++.+++|++.
T Consensus 20 ~~~~s~dg~~~-~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYL-HQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEE-EECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEE-EEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 67899999654 456799999999999887766654432 3789999999999998876 6899999987
Q ss_pred CCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEE-ecCCCCe-----------------EE
Q psy15421 128 TREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASF-IGHTGDV-----------------MS 189 (340)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~~~v-----------------~~ 189 (340)
+++.. ....+ ...+....|++++..++...++.|.+|++.+++..... .++...+ .+
T Consensus 99 ~g~~~--~~~~l---~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~ 173 (719)
T 1z68_A 99 NGEFV--RGNEL---PRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYA 173 (719)
T ss_dssp TTEEC--CSSCC---CSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCC
T ss_pred CCccc--cceec---CcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCccc
Confidence 65310 00111 23466788988875444445889999999887654322 1222222 48
Q ss_pred EEEcCCCCEEEEEeCCC----------------------------------cEEEEECCCCeee--------eEecCCCC
Q psy15421 190 LSLAPDMRTFVSGACDA----------------------------------SAKLWDIRDGSCK--------QTFPGHES 227 (340)
Q Consensus 190 ~~~~~~~~~~~sg~~dg----------------------------------~i~~wd~~~~~~~--------~~~~~h~~ 227 (340)
++|+||++.|++++.|. +|++||+.+++.. ..+.+|..
T Consensus 174 ~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 253 (719)
T 1z68_A 174 LWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDY 253 (719)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCE
T ss_pred EEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcc
Confidence 99999999999887652 7889999887642 12346788
Q ss_pred CeEEEEEecCCCEEEEEeCC----CcEEEEe----CcCCcEEEEee--cCCcccceE-----EEEEcCCCcEEEE--EeC
Q psy15421 228 DINAVTFFPNGWAFATGSDD----ATCRLFD----IRADQELAMYS--HDNIICGIT-----SVAFSRSGRLLLA--GYD 290 (340)
Q Consensus 228 ~v~~v~~~~~~~~l~s~s~d----~~i~iwd----~~~~~~~~~~~--~~~~~~~i~-----~~~~s~~~~~l~~--g~~ 290 (340)
.+..++|+||++.+++.... ..|.+|| ..+++...... .......+. .+.|+|||+.|+. +..
T Consensus 254 ~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 333 (719)
T 1z68_A 254 YFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDK 333 (719)
T ss_dssp EEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECT
T ss_pred eEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEcc
Confidence 89999999998877775433 2488899 66554332221 011111233 6789999996554 445
Q ss_pred CC--cEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCC-----CcEEecC
Q psy15421 291 DF--NCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWD-----SFLRIWN 340 (340)
Q Consensus 291 d~--~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D-----~~i~iW~ 340 (340)
++ .|.+|+..+++ ...+..+...+..+.++ ++..|+..+.+ +..+||.
T Consensus 334 ~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~ 388 (719)
T 1z68_A 334 DGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYR 388 (719)
T ss_dssp TSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEE
T ss_pred CCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEE
Confidence 55 56667765554 45566666678887777 88777766654 7888883
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.89 E-value=9.1e-22 Score=184.64 Aligned_cols=230 Identities=11% Similarity=0.008 Sum_probs=168.5
Q ss_pred CCcEEEEEECCCCCEEEEEeC-CCeEEEEEccCCCCceEEEEeecCCC-cceEEEEEcCCCeEEEEeC---CCeEEEEEC
Q psy15421 97 SSWVMTCAYAPSGSFVACGGL-DNICSIYSLKTREGNVRVSRELPGHT-GYLSCCRFLDDNQIVTSSG---DMSCALWDI 171 (340)
Q Consensus 97 ~~~i~~v~~~~~~~~l~~~~~-d~~v~i~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~l~~~~~---d~~v~iwd~ 171 (340)
..+|.+++|+|||++||+++. |++++||++..+. ...+..|. ..+....|+++..++++.. +....+|.+
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~-----~~~lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGE-----TVKLNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTE-----EEECCSSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCC-----cEeeecccccccccccCCCCeEEEEeccCCCCcceEEEEE
Confidence 356999999999999999887 9999999985432 12233444 5777888887743444443 455667655
Q ss_pred CC---CceEEEEecCCCCeEEEEEcCCCCE-EEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCC
Q psy15421 172 ET---GQQCASFIGHTGDVMSLSLAPDMRT-FVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDD 247 (340)
Q Consensus 172 ~~---~~~~~~~~~~~~~v~~~~~~~~~~~-~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d 247 (340)
.. +... .+... ......+|+|+++. +++.+.++.+.+||+.+++.......+. .+++|+|||+.+++++.|
T Consensus 96 ~~~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~ 170 (582)
T 3o4h_A 96 NTSRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFF 170 (582)
T ss_dssp ETTSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEE
T ss_pred eccCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEc
Confidence 43 2222 33222 23446688888753 3344445555599999887655544332 789999999999988877
Q ss_pred ----CcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCC--cEEEEeCCCceeeeeeccCCcceEEEE--
Q psy15421 248 ----ATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDF--NCNVWDSMKTERAGILAGHDNRVSCLG-- 319 (340)
Q Consensus 248 ----~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~--~i~iw~~~~~~~~~~~~~h~~~i~~~~-- 319 (340)
+.|++||+.+++......+. ..+..++|||||++|+++..++ .|++||..+++.. .+.+|...+..++
T Consensus 171 ~~~~~~i~~~d~~~g~~~~l~~~~---~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~ 246 (582)
T 3o4h_A 171 GGGRVSLFTSNLSSGGLRVFDSGE---GSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPT 246 (582)
T ss_dssp ETTEEEEEEEETTTCCCEEECCSS---CEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCS
T ss_pred CCCCeEEEEEcCCCCCceEeecCC---CccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhc
Confidence 78999998877655433232 3478999999999999888888 8999999888777 7788888887777
Q ss_pred ------ECCCCCEEEEeeCCCcEEecC
Q psy15421 320 ------VTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 320 ------~s~d~~~l~s~s~D~~i~iW~ 340 (340)
|||||..+++++.|++++||+
T Consensus 247 ~~~~~~~spdg~~~~~~~~~g~~~l~~ 273 (582)
T 3o4h_A 247 AITWLGYLPDGRLAVVARREGRSAVFI 273 (582)
T ss_dssp EEEEEEECTTSCEEEEEEETTEEEEEE
T ss_pred cccceeEcCCCcEEEEEEcCCcEEEEE
Confidence 999999999999999999994
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.88 E-value=1.6e-19 Score=159.59 Aligned_cols=267 Identities=8% Similarity=0.007 Sum_probs=174.3
Q ss_pred EEEEeC--CCeEEEEeC--CCCCeeE--Eee-CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEcc-CCCCceEEEEeecC
Q psy15421 70 LVSASQ--DGKLIVWDS--YTTNKVH--AIP-LRSSWVMTCAYAPSGSFVACGGLDNICSIYSLK-TREGNVRVSRELPG 141 (340)
Q Consensus 70 l~s~~~--d~~i~iwd~--~~~~~~~--~~~-~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~-~~~~~~~~~~~~~~ 141 (340)
++.|+. ++.|.+|++ .+++... ... .....+..++|+|++++|++++.+ .+.+|++. ++ ........+.
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g--~~~~~~~~~~ 81 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPT--EIVHEASHPI 81 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETT--EEEEEEEEEC
T ss_pred EEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCC--CEEEeeEeec
Confidence 344443 246777654 4444321 121 122356788999999999998888 89999986 43 2221112221
Q ss_pred CCcceEEEEEcCCCe--EE-EEe-------------CCCeEEEEECC-CCceEEEEe----cCCCCeEEEEEcCCCCEEE
Q psy15421 142 HTGYLSCCRFLDDNQ--IV-TSS-------------GDMSCALWDIE-TGQQCASFI----GHTGDVMSLSLAPDMRTFV 200 (340)
Q Consensus 142 ~~~~v~~~~~~~~~~--l~-~~~-------------~d~~v~iwd~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~~~ 200 (340)
+. ....+.+++++. ++ ++. .++.+.+|++. .++....+. .+...+.+++|+|++++++
T Consensus 82 ~g-~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~ 160 (365)
T 1jof_A 82 GG-HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLY 160 (365)
T ss_dssp CS-SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred CC-CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEE
Confidence 11 122345667765 33 332 68999999997 455443333 2456789999999999887
Q ss_pred EEe-CCCcEEEEECC-CCeee--eEec--CCCCCeEEEEEecCCCEEEEEeC-CCcEEEEeCc--CCcEEE---EeecC-
Q psy15421 201 SGA-CDASAKLWDIR-DGSCK--QTFP--GHESDINAVTFFPNGWAFATGSD-DATCRLFDIR--ADQELA---MYSHD- 267 (340)
Q Consensus 201 sg~-~dg~i~~wd~~-~~~~~--~~~~--~h~~~v~~v~~~~~~~~l~s~s~-d~~i~iwd~~--~~~~~~---~~~~~- 267 (340)
++. .++.|++||+. +++.. ..+. .|...+..++|+|+|+++++++. ++.|.+|++. +++... .....
T Consensus 161 ~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~ 240 (365)
T 1jof_A 161 SADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIP 240 (365)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSC
T ss_pred EEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCC
Confidence 665 47899999998 67643 2333 24567899999999998887775 7899999875 343321 11111
Q ss_pred -C---ccc------ceEEEE-EcCCCcEEEEEeCCC------cEEEEeCC-Cceeee---eeccCCcceEEEEECC---C
Q psy15421 268 -N---IIC------GITSVA-FSRSGRLLLAGYDDF------NCNVWDSM-KTERAG---ILAGHDNRVSCLGVTE---D 323 (340)
Q Consensus 268 -~---~~~------~i~~~~-~s~~~~~l~~g~~d~------~i~iw~~~-~~~~~~---~~~~h~~~i~~~~~s~---d 323 (340)
. ... .+..++ |+|||++|+++..+. .|.+|++. +++... ....+...+..++|+| |
T Consensus 241 ~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~d 320 (365)
T 1jof_A 241 PGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWS 320 (365)
T ss_dssp TTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTC
T ss_pred CCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcC
Confidence 1 011 377899 999999988765432 89999975 454332 2333555677899999 8
Q ss_pred CCEEEEeeCC-CcEEecC
Q psy15421 324 GMAVATGSWD-SFLRIWN 340 (340)
Q Consensus 324 ~~~l~s~s~D-~~i~iW~ 340 (340)
|++|++++.+ ++|+||+
T Consensus 321 g~~l~v~~~~~~~v~v~~ 338 (365)
T 1jof_A 321 DEWMAITDDQEGWLEIYR 338 (365)
T ss_dssp TTEEEEECSSSCEEEEEE
T ss_pred CCEEEEEEcCCCeEEEEE
Confidence 9999988865 8999995
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.87 E-value=5.8e-21 Score=183.54 Aligned_cols=284 Identities=8% Similarity=0.004 Sum_probs=186.9
Q ss_pred eEEecCccC---cEEEEEEcCCCCeEEEEeC---------CCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEE
Q psy15421 48 RRTLRGHLA---KIYAMHWGSDSRNLVSASQ---------DGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACG 115 (340)
Q Consensus 48 ~~~~~~h~~---~v~~~~~s~~~~~l~s~~~---------d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~ 115 (340)
++.+.+|.. .+.+++|||||++|++++. |+.|++||+.+++.+..... ...+..++|+|||++|+.+
T Consensus 49 ~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l-~~~~~~~~~SPDG~~la~~ 127 (719)
T 1z68_A 49 YTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL-PRPIQYLCWSPVGSKLAYV 127 (719)
T ss_dssp EEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC-CSSBCCEEECSSTTCEEEE
T ss_pred EEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec-CcccccceECCCCCEEEEE
Confidence 344455543 3899999999999998876 79999999988765211111 2457789999999999988
Q ss_pred eCCCeEEEEEccCCCCceEEEEeecCCCcce-----------------EEEEEcCCC-eEEEEeCCC-------------
Q psy15421 116 GLDNICSIYSLKTREGNVRVSRELPGHTGYL-----------------SCCRFLDDN-QIVTSSGDM------------- 164 (340)
Q Consensus 116 ~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~-~l~~~~~d~------------- 164 (340)
. ++.|++|++.++... . .+..++...+ ..+.|++++ .|+.++.|.
T Consensus 128 ~-~~~i~~~~~~~g~~~-~--l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~ 203 (719)
T 1z68_A 128 Y-QNNIYLKQRPGDPPF-Q--ITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGD 203 (719)
T ss_dssp E-TTEEEEESSTTSCCE-E--CCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCS
T ss_pred E-CCeEEEEeCCCCCcE-E--EecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCC
Confidence 5 789999998765321 1 1112222211 367888876 566665442
Q ss_pred ---------------------eEEEEECCCCceE---E-----EEecCCCCeEEEEEcCCCCEEEEEeCC----CcEEEE
Q psy15421 165 ---------------------SCALWDIETGQQC---A-----SFIGHTGDVMSLSLAPDMRTFVSGACD----ASAKLW 211 (340)
Q Consensus 165 ---------------------~v~iwd~~~~~~~---~-----~~~~~~~~v~~~~~~~~~~~~~sg~~d----g~i~~w 211 (340)
.+.+||+.+++.. . .+.+|...+.+++|+||++++++.... ..|.+|
T Consensus 204 ~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~ 283 (719)
T 1z68_A 204 EQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSIC 283 (719)
T ss_dssp SSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEE
T ss_pred CCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEE
Confidence 7889999887642 1 123577788999999998777764432 348889
Q ss_pred E----CCCCeeeeEe----cCCCCCeE-----EEEEecCCCEEE--EEeCCC--cEEEEeCcCCcEEEEeecCCcccceE
Q psy15421 212 D----IRDGSCKQTF----PGHESDIN-----AVTFFPNGWAFA--TGSDDA--TCRLFDIRADQELAMYSHDNIICGIT 274 (340)
Q Consensus 212 d----~~~~~~~~~~----~~h~~~v~-----~v~~~~~~~~l~--s~s~d~--~i~iwd~~~~~~~~~~~~~~~~~~i~ 274 (340)
| ..++++...+ .+|...+. .+.|+|||+.++ ++..++ .|.+||+.+++.. .+... ...+.
T Consensus 284 d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~-~lt~~--~~~v~ 360 (719)
T 1z68_A 284 DFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAI-QITSG--KWEAI 360 (719)
T ss_dssp EECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCE-ECSCS--SSCEE
T ss_pred cccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceE-ecccC--ceEEE
Confidence 9 8877766555 46776666 789999998554 344555 4667777665532 22221 22366
Q ss_pred EEEEcCCCcEEEEEeCC-----CcEEEEeCCC--ce-eeeee----ccCCcceEEEEECCCCCEEE-EeeCC--CcEEec
Q psy15421 275 SVAFSRSGRLLLAGYDD-----FNCNVWDSMK--TE-RAGIL----AGHDNRVSCLGVTEDGMAVA-TGSWD--SFLRIW 339 (340)
Q Consensus 275 ~~~~s~~~~~l~~g~~d-----~~i~iw~~~~--~~-~~~~~----~~h~~~i~~~~~s~d~~~l~-s~s~D--~~i~iW 339 (340)
.+.++ +++.|+..+.+ +..++|.... +. ....+ .+|...+..+.|+||+++++ +++.+ ..+.+|
T Consensus 361 ~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~ 439 (719)
T 1z68_A 361 NIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLH 439 (719)
T ss_dssp EEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEE
T ss_pred EEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEE
Confidence 66666 77766665554 7888987543 31 11222 23667888999999998776 34433 345555
Q ss_pred C
Q psy15421 340 N 340 (340)
Q Consensus 340 ~ 340 (340)
|
T Consensus 440 d 440 (719)
T 1z68_A 440 D 440 (719)
T ss_dssp C
T ss_pred E
Confidence 4
No 162
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.86 E-value=4e-20 Score=164.59 Aligned_cols=271 Identities=14% Similarity=0.006 Sum_probs=177.8
Q ss_pred EEEEEEcCCCCeEEEEeCC---CeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceE
Q psy15421 58 IYAMHWGSDSRNLVSASQD---GKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVR 134 (340)
Q Consensus 58 v~~~~~s~~~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~ 134 (340)
+..++|+|||++|+.+..+ ..|.+||+.+++.......+........|+|+|++|+.++.++.+.+|++..+. ..
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~--~~ 115 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLE--EQ 115 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCC--EE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCC--cE
Confidence 6788999999998877543 468888988776543333332222236799999999999999999999987543 22
Q ss_pred EEEeecCCCcceEE---E----------------EEcCCCe-EEEE-----eCCCeEEEEECCCCceEEEEecCCCCeEE
Q psy15421 135 VSRELPGHTGYLSC---C----------------RFLDDNQ-IVTS-----SGDMSCALWDIETGQQCASFIGHTGDVMS 189 (340)
Q Consensus 135 ~~~~~~~~~~~v~~---~----------------~~~~~~~-l~~~-----~~d~~v~iwd~~~~~~~~~~~~~~~~v~~ 189 (340)
.... .+...... + .+.+++. ++.. ..+..|.+||+.+++.... ..+...+..
T Consensus 116 ~~~~--~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~-~~~~~~~~~ 192 (396)
T 3c5m_A 116 VIYT--VDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVI-HQDTAWLGH 192 (396)
T ss_dssp EEEE--CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEE-EEESSCEEE
T ss_pred EEEe--cccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEee-ccCCccccc
Confidence 2211 12221111 1 1223322 2211 3566899999988765433 356677899
Q ss_pred EEEcC-CCCEEEEEeCC------CcEEEEECCCCeeeeEecCC-CCCeEEEEEecCCCEEEEEeCC-----CcEEEEeCc
Q psy15421 190 LSLAP-DMRTFVSGACD------ASAKLWDIRDGSCKQTFPGH-ESDINAVTFFPNGWAFATGSDD-----ATCRLFDIR 256 (340)
Q Consensus 190 ~~~~~-~~~~~~sg~~d------g~i~~wd~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~s~d-----~~i~iwd~~ 256 (340)
+.|+| +++.++..+.+ ..|.+||+..+......... ...+..++|+|+|++|+.++.+ +.|++||+.
T Consensus 193 ~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 272 (396)
T 3c5m_A 193 PIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE 272 (396)
T ss_dssp EEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT
T ss_pred ceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECC
Confidence 99999 78766655443 46888998765533333311 2357889999999987776554 449999998
Q ss_pred CCcEEEEeecCCcccceEEEEEcC-CCcEEEEEe----------------CCCcEEEEeCCCceeeeeeccCCc------
Q psy15421 257 ADQELAMYSHDNIICGITSVAFSR-SGRLLLAGY----------------DDFNCNVWDSMKTERAGILAGHDN------ 313 (340)
Q Consensus 257 ~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~g~----------------~d~~i~iw~~~~~~~~~~~~~h~~------ 313 (340)
+++......... .. +.|+| +|++++.++ .+..|++||..+++. ..+..|..
T Consensus 273 ~g~~~~l~~~~~----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~ 346 (396)
T 3c5m_A 273 TLENEEVMVMPP----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDVLD 346 (396)
T ss_dssp TCCEEEEEECCS----EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEEECCCCCCCBT
T ss_pred CCCeEEeeeCCC----CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEccCCCCcccccc
Confidence 765543322221 23 88999 999888765 347899999877654 34545544
Q ss_pred -----ceEEEEECCCCCEEEEeeC-CCcEEec
Q psy15421 314 -----RVSCLGVTEDGMAVATGSW-DSFLRIW 339 (340)
Q Consensus 314 -----~i~~~~~s~d~~~l~s~s~-D~~i~iW 339 (340)
.+..++|+|||+.|+.++. ++...||
T Consensus 347 ~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~ 378 (396)
T 3c5m_A 347 GDRQITHPHPSFTPNDDGVLFTSDFEGVPAIY 378 (396)
T ss_dssp TBSSTTCCCCEECTTSSEEEEEECTTSSCEEE
T ss_pred ccccCCCCCceEccCCCeEEEEecCCCCceEE
Confidence 2567899999998887765 5666555
No 163
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.86 E-value=8e-19 Score=152.83 Aligned_cols=249 Identities=12% Similarity=0.130 Sum_probs=181.1
Q ss_pred cCcEEEEEEcCCCCeEEEEeCC------------------------CeEEEEeCCCCCeeEEee-CCCCcEEEEEECCCC
Q psy15421 55 LAKIYAMHWGSDSRNLVSASQD------------------------GKLIVWDSYTTNKVHAIP-LRSSWVMTCAYAPSG 109 (340)
Q Consensus 55 ~~~v~~~~~s~~~~~l~s~~~d------------------------~~i~iwd~~~~~~~~~~~-~~~~~i~~v~~~~~~ 109 (340)
.+.+.+++++|+|+++++...+ ++|.+||..+++...... .+-.....++++|+|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999999988877 478899988777665443 233467788888888
Q ss_pred CEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEE
Q psy15421 110 SFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMS 189 (340)
Q Consensus 110 ~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~ 189 (340)
+++++...++.|++|+........ ..+.. .+. .+.. ..+...+..
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~---~~~~~------------~~~--~g~~------------------~~~~~~P~~ 147 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPL---LILGR------------SMQ--PGSD------------------QNHFCQPTD 147 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCS---EEESB------------TTB--CCCS------------------TTCCSSEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEE---EEecc------------cCC--CCCC------------------ccccCCCcE
Confidence 888877778888888753221010 11000 000 0000 123345789
Q ss_pred EEEcC-CCCEEEEEe-CCCcEEEEECCCCeeeeEecC----------CCCCeEEEEEecC-CCEEEEEeCCCcEEEEeCc
Q psy15421 190 LSLAP-DMRTFVSGA-CDASAKLWDIRDGSCKQTFPG----------HESDINAVTFFPN-GWAFATGSDDATCRLFDIR 256 (340)
Q Consensus 190 ~~~~~-~~~~~~sg~-~dg~i~~wd~~~~~~~~~~~~----------h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~ 256 (340)
++++| ++.++++.+ .++.|++|| .++..+..+.. +......++++|+ +..+++...++.|++||..
T Consensus 148 ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 148 VAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp EEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 99999 788888886 799999999 56766666532 2234789999998 8888888889999999998
Q ss_pred CCcEEEEeecCCcccceEEEEEcCCCcEEEE-------EeCCCcEEEEeCCCceeeeee---ccCCcceEEEEECCCCCE
Q psy15421 257 ADQELAMYSHDNIICGITSVAFSRSGRLLLA-------GYDDFNCNVWDSMKTERAGIL---AGHDNRVSCLGVTEDGMA 326 (340)
Q Consensus 257 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-------g~~d~~i~iw~~~~~~~~~~~---~~h~~~i~~~~~s~d~~~ 326 (340)
+++.+..+........+..++|+| +..+++ ...+..|++|+..+++.+..+ .++......++++|+|..
T Consensus 227 ~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~l 305 (329)
T 3fvz_A 227 TKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTV 305 (329)
T ss_dssp TCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEE
T ss_pred CCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCE
Confidence 777776665444445678899999 444443 334458999999888888776 367788999999999999
Q ss_pred EEEeeCCCcEEecC
Q psy15421 327 VATGSWDSFLRIWN 340 (340)
Q Consensus 327 l~s~s~D~~i~iW~ 340 (340)
+++.+.++.|++|+
T Consensus 306 yvad~~~~~I~~~~ 319 (329)
T 3fvz_A 306 YIGDAHTNTVWKFT 319 (329)
T ss_dssp EEEESSSCCEEEEE
T ss_pred EEEECCCCEEEEEe
Confidence 99999999999985
No 164
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.85 E-value=1.4e-19 Score=172.26 Aligned_cols=284 Identities=13% Similarity=0.047 Sum_probs=194.0
Q ss_pred EecCccCcEEEEEEcCCCCeEEEE--eCCCeEEEEeCCCCCeeEEeeCCCCcEE---------EEEEC--CCCCE-EEEE
Q psy15421 50 TLRGHLAKIYAMHWGSDSRNLVSA--SQDGKLIVWDSYTTNKVHAIPLRSSWVM---------TCAYA--PSGSF-VACG 115 (340)
Q Consensus 50 ~~~~h~~~v~~~~~s~~~~~l~s~--~~d~~i~iwd~~~~~~~~~~~~~~~~i~---------~v~~~--~~~~~-l~~~ 115 (340)
.+.+|...+..++|+++.-++++. +.++...||....+.....+..+...+. ...|+ |||++ |+.+
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 467899999999999887777777 5688999998654444555555544444 44454 99998 7665
Q ss_pred eC-CCeEEEEEccCCC-CceEEEEeecC-----CCcceEEEEEcCCC-eEEEEeCC----------CeEEEEECCC----
Q psy15421 116 GL-DNICSIYSLKTRE-GNVRVSRELPG-----HTGYLSCCRFLDDN-QIVTSSGD----------MSCALWDIET---- 173 (340)
Q Consensus 116 ~~-d~~v~i~~~~~~~-~~~~~~~~~~~-----~~~~v~~~~~~~~~-~l~~~~~d----------~~v~iwd~~~---- 173 (340)
+. +..|.++++.... +... .+.. |...+....|++++ .|+.++.+ ..|.+||+.+
T Consensus 98 ~~~~~~l~~~~~~~~g~~~~~---~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 174 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAVPR---PLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA 174 (662)
T ss_dssp BTTTCCEEEECTTSTTCCCCE---ECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT
T ss_pred ECCCCeEEEEcCCCCCCCCCE---eccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccc
Confidence 44 3444444443001 2221 2223 56667788888776 56666655 5899999987
Q ss_pred --CceEEEEe-cCCCCeEEEEEcCCCCEEEEEeCC--------CcEEEEECC-CC---eeeeEecCCCCCeEEEEEecCC
Q psy15421 174 --GQQCASFI-GHTGDVMSLSLAPDMRTFVSGACD--------ASAKLWDIR-DG---SCKQTFPGHESDINAVTFFPNG 238 (340)
Q Consensus 174 --~~~~~~~~-~~~~~v~~~~~~~~~~~~~sg~~d--------g~i~~wd~~-~~---~~~~~~~~h~~~v~~v~~~~~~ 238 (340)
++. ..+. .+...+..++|+||++.++.++.+ ..|.+||+. ++ +......+|...+..++|+|||
T Consensus 175 ~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg 253 (662)
T 3azo_A 175 DRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDG 253 (662)
T ss_dssp CGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTS
T ss_pred cCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCC
Confidence 443 4555 555678889999999999877754 379999998 56 4444455567889999999999
Q ss_pred CEEEEEeCCC--cEEEEeCcCCcEEEEeecCCcc------cceEEEEEcCCCcEEEEEeCCCcEEEE--eCCCceeeeee
Q psy15421 239 WAFATGSDDA--TCRLFDIRADQELAMYSHDNII------CGITSVAFSRSGRLLLAGYDDFNCNVW--DSMKTERAGIL 308 (340)
Q Consensus 239 ~~l~s~s~d~--~i~iwd~~~~~~~~~~~~~~~~------~~i~~~~~s~~~~~l~~g~~d~~i~iw--~~~~~~~~~~~ 308 (340)
+.++++..++ .|.+||..+++........... ..+..++|+|++++++++.. +.+++| +..+++ ...+
T Consensus 254 ~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l 331 (662)
T 3azo_A 254 SLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDA 331 (662)
T ss_dssp CEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEEC
T ss_pred eEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEe
Confidence 9888888888 5666666555443322221111 01467899999999999999 999999 544444 5677
Q ss_pred ccCCcceEEE-EECCCCCEEEEeeCCCcEEec
Q psy15421 309 AGHDNRVSCL-GVTEDGMAVATGSWDSFLRIW 339 (340)
Q Consensus 309 ~~h~~~i~~~-~~s~d~~~l~s~s~D~~i~iW 339 (340)
..|...+..+ +++++..++++++.+....||
T Consensus 332 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 332 AGPWTEWAATLTVSGTRAVGVAASPRTAYEVV 363 (662)
T ss_dssp CSSCCEEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred cCCCCeEEEEEecCCCEEEEEEcCCCCCCEEE
Confidence 7888888877 665555556677777655555
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.85 E-value=5.9e-18 Score=144.14 Aligned_cols=234 Identities=14% Similarity=0.158 Sum_probs=173.6
Q ss_pred CCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeec------CCCcceEEEEE-cCCCeEEEEeC--CCeEE
Q psy15421 97 SSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELP------GHTGYLSCCRF-LDDNQIVTSSG--DMSCA 167 (340)
Q Consensus 97 ~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~------~~~~~v~~~~~-~~~~~l~~~~~--d~~v~ 167 (340)
-..+..+++++++.++++...++.|.+|+... . . ...+. ++......+.+ .+++.++.+.. ++.|.
T Consensus 29 ~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g-~--~--~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 29 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG-R--F--KFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp BSCEEEEEECTTCCEEEEEGGGTEEEEECTTS-C--E--EEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred cCCCceEEECCCCCEEEEECCCCEEEEECCCC-c--E--EEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence 34578899999999988888899999998652 1 1 12221 23345667777 45666665553 89999
Q ss_pred EEECCCCceEEEEec-CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEec--CCCCCeEEEEEecCCCEEEEE
Q psy15421 168 LWDIETGQQCASFIG-HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP--GHESDINAVTFFPNGWAFATG 244 (340)
Q Consensus 168 iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~ 244 (340)
+|| ..++.+..+.. +...+..++++|+++++++...++.|.+||.. ++....+. ++...+.+++++|+|..+++.
T Consensus 104 ~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 104 IYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp EEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred EEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEE
Confidence 999 45666655533 34568999999999988888889999999964 55555553 344568999999999988888
Q ss_pred eCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCC-cEEEEeCCCceeeeeeccCCc--ceEEEEEC
Q psy15421 245 SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDF-NCNVWDSMKTERAGILAGHDN--RVSCLGVT 321 (340)
Q Consensus 245 s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~-~i~iw~~~~~~~~~~~~~h~~--~i~~~~~s 321 (340)
..++.|++||... +.+..+........+..++++|+|+++++...++ .|.+|+. +++.+..+..+.. .+.+++++
T Consensus 182 ~~~~~i~~~~~~g-~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~ 259 (286)
T 1q7f_A 182 NRAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALM 259 (286)
T ss_dssp GGGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEE
T ss_pred CCCCEEEEEcCCC-CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEEC
Confidence 8899999999753 4444444332224578999999999999888886 9999994 5666666655543 47799999
Q ss_pred CCCCEEEEeeCCCcEEecC
Q psy15421 322 EDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 322 ~d~~~l~s~s~D~~i~iW~ 340 (340)
|+|+++++ +.|++|++|+
T Consensus 260 ~~g~l~vs-~~~~~v~v~~ 277 (286)
T 1q7f_A 260 DDGSVVLA-SKDYRLYIYR 277 (286)
T ss_dssp TTTEEEEE-ETTTEEEEEE
T ss_pred CCCcEEEE-CCCCeEEEEE
Confidence 99987777 5799999995
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.85 E-value=1.7e-19 Score=173.76 Aligned_cols=268 Identities=10% Similarity=0.026 Sum_probs=177.9
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCc-----EEEEEECCCCCEEEEEeCC---------CeE
Q psy15421 56 AKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSW-----VMTCAYAPSGSFVACGGLD---------NIC 121 (340)
Q Consensus 56 ~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~-----i~~v~~~~~~~~l~~~~~d---------~~v 121 (340)
....++.|+||+.+++++ |++|++||+.+++....+..|... ...+.|||||++++.++.+ +.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 346689999999988886 999999999999887777766532 2347889999999998876 445
Q ss_pred EEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEE-ecCCCCe-------------
Q psy15421 122 SIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASF-IGHTGDV------------- 187 (340)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~~~v------------- 187 (340)
.+||+.++. ...+..|...+....|++++..++...++.|.+|++.+++..+.. .++...+
T Consensus 95 ~~~d~~~~~-----~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~ 169 (740)
T 4a5s_A 95 DIYDLNKRQ-----LITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEV 169 (740)
T ss_dssp EEEETTTTE-----ECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHT
T ss_pred EEEECCCCc-----EEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccchh
Confidence 699987653 123455677788889998875444446899999999887644321 1222222
Q ss_pred ----EEEEEcCCCCEEEEEeCCC------------------------------------cEEEEECCC---Ce--eeeEe
Q psy15421 188 ----MSLSLAPDMRTFVSGACDA------------------------------------SAKLWDIRD---GS--CKQTF 222 (340)
Q Consensus 188 ----~~~~~~~~~~~~~sg~~dg------------------------------------~i~~wd~~~---~~--~~~~~ 222 (340)
..+.|+|||+.|+.++.|. +|++||+.+ +. ....+
T Consensus 170 ~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l 249 (740)
T 4a5s_A 170 FSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQI 249 (740)
T ss_dssp SSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEE
T ss_pred cCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEe
Confidence 3589999999998775332 478899988 62 12233
Q ss_pred c------CCCCCeEEEEEecCCCEEEEEeC----CCcEEEEeCcCCc----EE---EE--eecCCccc--ceEEEEEcCC
Q psy15421 223 P------GHESDINAVTFFPNGWAFATGSD----DATCRLFDIRADQ----EL---AM--YSHDNIIC--GITSVAFSRS 281 (340)
Q Consensus 223 ~------~h~~~v~~v~~~~~~~~l~s~s~----d~~i~iwd~~~~~----~~---~~--~~~~~~~~--~i~~~~~s~~ 281 (340)
. +|...+..++|+|||+.++.... +..|++||..+++ .. .. ..+..... .....+|+||
T Consensus 250 ~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspD 329 (740)
T 4a5s_A 250 TAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLD 329 (740)
T ss_dssp CCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTT
T ss_pred cCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCC
Confidence 2 37778999999999986665533 3479999988765 11 11 11221111 0236789999
Q ss_pred CcEEE-EEeC-C--CcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEE-EeeC
Q psy15421 282 GRLLL-AGYD-D--FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVA-TGSW 332 (340)
Q Consensus 282 ~~~l~-~g~~-d--~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~-s~s~ 332 (340)
|+.|+ ..+. + ..|++|+...++... +......|..+.. +|+..|+ +++.
T Consensus 330 G~~l~~~~s~~~G~~~l~~~~~~~~~~~~-lT~g~~~v~~~~~-~d~~~i~f~~~~ 383 (740)
T 4a5s_A 330 GNSFYKIISNEEGYRHICYFQIDKKDCTF-ITKGTWEVIGIEA-LTSDYLYYISNE 383 (740)
T ss_dssp SSEEEEEEECTTSCEEEEEEETTCSSCEE-SCCSSSCEEEEEE-ECSSEEEEEESC
T ss_pred CCEEEEEEEcCCCceEEEEEECCCCceEe-cccCCEEEEEEEE-EeCCEEEEEEec
Confidence 99877 6553 3 467888876655443 4334455555432 3355444 4443
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.84 E-value=2e-18 Score=152.45 Aligned_cols=247 Identities=11% Similarity=0.009 Sum_probs=165.8
Q ss_pred ccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCC-CCCeeEEee--CCCCcEEEEEECCCCCE--EEEEe------------
Q psy15421 54 HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSY-TTNKVHAIP--LRSSWVMTCAYAPSGSF--VACGG------------ 116 (340)
Q Consensus 54 h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~--~~~~~i~~v~~~~~~~~--l~~~~------------ 116 (340)
+...+..++|+|++++|++++.+ .|.+|++. +++...... .+. ....++|+|+|++ ++++.
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g-~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGG-HPRANDADTNTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCS-SGGGGCTTSCCEEEEEEECSSTTCCEEEEEES
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCC-CCccEEECCCCCEEEEEEecCCcceeccceee
Confidence 44567899999999999999888 99999986 665543222 112 2445789999994 55553
Q ss_pred -CCCeEEEEEccCCCCceEEEEee-cCCCcceEEEEEcCCCe-EEEEe-CCCeEEEEECC-CCceE--EEEe--cCCCCe
Q psy15421 117 -LDNICSIYSLKTREGNVRVSREL-PGHTGYLSCCRFLDDNQ-IVTSS-GDMSCALWDIE-TGQQC--ASFI--GHTGDV 187 (340)
Q Consensus 117 -~d~~v~i~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~-l~~~~-~d~~v~iwd~~-~~~~~--~~~~--~~~~~v 187 (340)
.++.+.+|++............. ..+...+..+.|++++. ++++. .++.|.+|++. +++.. ..+. .|...+
T Consensus 116 ~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p 195 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHP 195 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCE
T ss_pred cCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCC
Confidence 68999999996422211111111 12445677888988774 55444 47899999998 67643 2333 235678
Q ss_pred EEEEEcCCCCEEEEEeC-CCcEEEEECC--CCeee---eE---ecC----CCC------CeEEEE-EecCCCEEEEEeCC
Q psy15421 188 MSLSLAPDMRTFVSGAC-DASAKLWDIR--DGSCK---QT---FPG----HES------DINAVT-FFPNGWAFATGSDD 247 (340)
Q Consensus 188 ~~~~~~~~~~~~~sg~~-dg~i~~wd~~--~~~~~---~~---~~~----h~~------~v~~v~-~~~~~~~l~s~s~d 247 (340)
..++|+|+++++++++. ++.|.+|++. +++.. .. ++. |.. .+..++ |+|||++++++..+
T Consensus 196 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~ 275 (365)
T 1jof_A 196 RWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA 275 (365)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE
T ss_pred CEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCC
Confidence 99999999998887664 7899999765 45542 12 221 222 478999 99999988776543
Q ss_pred C------cEEEEeCc-CCcEEEEee-cCCcccceEEEEEcC---CCcEEEEEeC-CCcEEEEeCCCc
Q psy15421 248 A------TCRLFDIR-ADQELAMYS-HDNIICGITSVAFSR---SGRLLLAGYD-DFNCNVWDSMKT 302 (340)
Q Consensus 248 ~------~i~iwd~~-~~~~~~~~~-~~~~~~~i~~~~~s~---~~~~l~~g~~-d~~i~iw~~~~~ 302 (340)
. .|.+|++. +++...... .......+..++|+| +|++|+++.. ++.|++|+....
T Consensus 276 ~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 276 NKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp SSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 2 89999986 444332111 111122356789999 8999999876 489999987544
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.84 E-value=4.8e-17 Score=138.50 Aligned_cols=241 Identities=13% Similarity=0.163 Sum_probs=174.0
Q ss_pred cCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeC------CCCcEEEEEE-CCCCCEEEEEeC-CCeEEE
Q psy15421 52 RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPL------RSSWVMTCAY-APSGSFVACGGL-DNICSI 123 (340)
Q Consensus 52 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~------~~~~i~~v~~-~~~~~~l~~~~~-d~~v~i 123 (340)
.+|.....++++++++.++++...++.|++||.. ++.+..+.. +...+..+++ .+++.++++... ++.|.+
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 4567789999999999998888899999999976 555555432 2346788999 577777776643 788999
Q ss_pred EEccCCCCceEEEEeec-CCCcceEEEEEcCCCeE-EEEeCCCeEEEEECCCCceEEEEe--cCCCCeEEEEEcCCCCEE
Q psy15421 124 YSLKTREGNVRVSRELP-GHTGYLSCCRFLDDNQI-VTSSGDMSCALWDIETGQQCASFI--GHTGDVMSLSLAPDMRTF 199 (340)
Q Consensus 124 ~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~ 199 (340)
|+. .+ .. ...+. .+......+.+.+++.+ ++...++.|.+||.. ++....+. .+...+..++++|+++++
T Consensus 105 ~d~-~g--~~--~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~ 178 (286)
T 1q7f_A 105 YNQ-YG--QF--VRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIF 178 (286)
T ss_dssp ECT-TS--CE--EEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEE
T ss_pred ECC-CC--cE--EEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEE
Confidence 983 22 21 22222 23345667777766654 455568899999975 45555553 344568999999999988
Q ss_pred EEEeCCCcEEEEECCCCeeeeEecCC--CCCeEEEEEecCCCEEEEEeCCC-cEEEEeCcCCcEEEEeecCCcccceEEE
Q psy15421 200 VSGACDASAKLWDIRDGSCKQTFPGH--ESDINAVTFFPNGWAFATGSDDA-TCRLFDIRADQELAMYSHDNIICGITSV 276 (340)
Q Consensus 200 ~sg~~dg~i~~wd~~~~~~~~~~~~h--~~~v~~v~~~~~~~~l~s~s~d~-~i~iwd~~~~~~~~~~~~~~~~~~i~~~ 276 (340)
++...++.|++||.. ++.+..+..+ ...+..++++|+|..+++...++ .|.+||.. ++.+..+........+..+
T Consensus 179 v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i 256 (286)
T 1q7f_A 179 ISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESKVKHAQCFDV 256 (286)
T ss_dssp EEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEESSCCSCEEEE
T ss_pred EEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEcccCCCCcceeE
Confidence 888889999999974 5555566433 35788999999999988888886 99999965 4444444332222236789
Q ss_pred EEcCCCcEEEEEeCCCcEEEEeCCCc
Q psy15421 277 AFSRSGRLLLAGYDDFNCNVWDSMKT 302 (340)
Q Consensus 277 ~~s~~~~~l~~g~~d~~i~iw~~~~~ 302 (340)
+++|+|+++++ +.|+.|++|+....
T Consensus 257 ~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 257 ALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred EECCCCcEEEE-CCCCeEEEEEcccc
Confidence 99999987777 57899999986543
No 169
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.84 E-value=4.6e-18 Score=148.51 Aligned_cols=254 Identities=15% Similarity=0.066 Sum_probs=168.3
Q ss_pred eEEecCcc-CcEEEEEEcCCCCeE-EEEeCCCeEEEEeCCCCCeeEEeeCCC------CcEEEEEECCCCCEEEEEeCC-
Q psy15421 48 RRTLRGHL-AKIYAMHWGSDSRNL-VSASQDGKLIVWDSYTTNKVHAIPLRS------SWVMTCAYAPSGSFVACGGLD- 118 (340)
Q Consensus 48 ~~~~~~h~-~~v~~~~~s~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~------~~i~~v~~~~~~~~l~~~~~d- 118 (340)
.+++..+. ..+..++|+|+++.+ ++...++.|.+||+.+++.+..+.... ..+..++|+|+|+++++++.+
T Consensus 34 ~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 113 (349)
T 1jmx_B 34 YKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPT 113 (349)
T ss_dssp EEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEE
T ss_pred EEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccc
Confidence 34454332 257889999999865 455678999999999888776666432 226678999999999998865
Q ss_pred -----------CeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCCC--
Q psy15421 119 -----------NICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTG-- 185 (340)
Q Consensus 119 -----------~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-- 185 (340)
+.+.+||+.++... ....... +...+.++.|++++.++.++ +.|.+||+.+++....+..+..
T Consensus 114 ~~~~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~-~~~~~~~~~~s~dg~l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~ 189 (349)
T 1jmx_B 114 QRLNDHYVVKPPRLEVFSTADGLEA-KPVRTFP-MPRQVYLMRAADDGSLYVAG--PDIYKMDVKTGKYTVALPLRNWNR 189 (349)
T ss_dssp EECSSCEEECCCEEEEEEGGGGGGB-CCSEEEE-CCSSCCCEEECTTSCEEEES--SSEEEECTTTCCEEEEECSTTCCC
T ss_pred cccccccccCCCeEEEEECCCcccc-ceeeecc-CCCcccceeECCCCcEEEcc--CcEEEEeCCCCceeccccccccCC
Confidence 89999998763211 1112222 22346667788777666554 3499999999887766543320
Q ss_pred ----------------------CeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeee-eEecCCCCCeEEEEEec-CCCE
Q psy15421 186 ----------------------DVMSLSLAPDMRTFVSGA-CDASAKLWDIRDGSCK-QTFPGHESDINAVTFFP-NGWA 240 (340)
Q Consensus 186 ----------------------~v~~~~~~~~~~~~~sg~-~dg~i~~wd~~~~~~~-~~~~~h~~~v~~v~~~~-~~~~ 240 (340)
....+++++++....... ....+..+|..+++.. ..+..+...+.+++|+| ++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~ 269 (349)
T 1jmx_B 190 KGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQ 269 (349)
T ss_dssp TTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTE
T ss_pred ccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCE
Confidence 234456665432110000 0011122444444321 12223556788999999 9999
Q ss_pred EEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeecc
Q psy15421 241 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG 310 (340)
Q Consensus 241 l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~ 310 (340)
++++ ++.|.+||+.+.+.+..+.... .+..++|+|++++|++++.++.|++||..+++.+..+..
T Consensus 270 l~~~--~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 270 IYGV--LNRLAKYDLKQRKLIKAANLDH---TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKL 334 (349)
T ss_dssp EEEE--ESEEEEEETTTTEEEEEEECSS---CCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEEC
T ss_pred EEEE--cCeEEEEECccCeEEEEEcCCC---CccceEECCCCCEEEEecCCCeEEEEeccccceeeeeec
Confidence 8888 8899999999887766654332 367899999999988888899999999988887776643
No 170
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.83 E-value=7.8e-18 Score=148.43 Aligned_cols=264 Identities=12% Similarity=0.097 Sum_probs=184.2
Q ss_pred eEEecCccCcEEEEEEcCCCCeEEEEe----------CCCeEEEEeCCCCCeeEEeeCC------CCcEEEEEECCCCCE
Q psy15421 48 RRTLRGHLAKIYAMHWGSDSRNLVSAS----------QDGKLIVWDSYTTNKVHAIPLR------SSWVMTCAYAPSGSF 111 (340)
Q Consensus 48 ~~~~~~h~~~v~~~~~s~~~~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~------~~~i~~v~~~~~~~~ 111 (340)
..++..+..+ .++|+||++++.++. .+++|.+||..+.+.+..+... ......++++|+|++
T Consensus 44 ~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~ 121 (361)
T 2oiz_A 44 LGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKF 121 (361)
T ss_dssp EEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSE
T ss_pred EEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCE
Confidence 3456666555 899999999998886 3678999999988888777643 233557889999999
Q ss_pred EEEEeC--CCeEEEEEccCCCCceEEEEe-ecCCCcceEEEEEcCC--CeEEEEeCCCeEEEEECCC-CceEEEE-----
Q psy15421 112 VACGGL--DNICSIYSLKTREGNVRVSRE-LPGHTGYLSCCRFLDD--NQIVTSSGDMSCALWDIET-GQQCASF----- 180 (340)
Q Consensus 112 l~~~~~--d~~v~i~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~--~~l~~~~~d~~v~iwd~~~-~~~~~~~----- 180 (340)
|+++.. ++.|.+||+.+++ .... ++. .... .+.+.+. ..+++.+.|+.+.+|++.. ++.....
T Consensus 122 l~v~n~~~~~~v~v~d~~~~~----~~~~~i~~-~~~~-~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~ 195 (361)
T 2oiz_A 122 IVLQNASPATSIGIVDVAKGD----YVEDVTAA-AGCW-SVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQM 195 (361)
T ss_dssp EEEEEESSSEEEEEEETTTTE----EEEEEGGG-TTEE-EEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCC
T ss_pred EEEECCCCCCeEEEEECCCCc----EEEEEecC-CCcc-eeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccce
Confidence 998874 5889999997652 3333 332 1111 1223332 3678888999999999865 4443211
Q ss_pred -ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCee--eeEecCCC----------CCeEEEEEecCCCEEEEEeC-
Q psy15421 181 -IGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC--KQTFPGHE----------SDINAVTFFPNGWAFATGSD- 246 (340)
Q Consensus 181 -~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~--~~~~~~h~----------~~v~~v~~~~~~~~l~s~s~- 246 (340)
..... ...+.+.|++..++..+.++.|.++|+..... ...+.-.. .....++|+|++..+..+..
T Consensus 196 ~~~~~~-~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~ 274 (361)
T 2oiz_A 196 FSVKDD-PIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHP 274 (361)
T ss_dssp SCTTTS-CBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEES
T ss_pred EcCCCC-ceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEcc
Confidence 11111 12233456677777777899999999875432 12211000 11112789999777665532
Q ss_pred ----------CCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCc--eeeeeeccCCcc
Q psy15421 247 ----------DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT--ERAGILAGHDNR 314 (340)
Q Consensus 247 ----------d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~--~~~~~~~~h~~~ 314 (340)
.+.|.+||..+.+.+..+.... +..++|+|+|++|+++.. ++|.+||..++ +.+..+..+...
T Consensus 275 ~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~----p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~ 349 (361)
T 2oiz_A 275 DGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD----ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEA 349 (361)
T ss_dssp SCCTTCTTCCCSEEEEEETTTTEEEEEEECTT----CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSS
T ss_pred CCCcccccCCCceEEEEECCCCcEEEEEecCC----eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCC
Confidence 3589999999988887765433 678999999999998887 99999999999 888887777778
Q ss_pred eEEEEECCCCC
Q psy15421 315 VSCLGVTEDGM 325 (340)
Q Consensus 315 i~~~~~s~d~~ 325 (340)
...++++|+|.
T Consensus 350 P~~~~~~p~G~ 360 (361)
T 2oiz_A 350 SLQVQFHPVGG 360 (361)
T ss_dssp EEEEEECCCSC
T ss_pred cEEEEecCCCC
Confidence 88999999986
No 171
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.82 E-value=1.2e-17 Score=147.29 Aligned_cols=255 Identities=14% Similarity=0.158 Sum_probs=176.6
Q ss_pred CCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeC----------CCeEEEEEccCCCCceEEEEeecC---
Q psy15421 75 QDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGL----------DNICSIYSLKTREGNVRVSRELPG--- 141 (340)
Q Consensus 75 ~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~----------d~~v~i~~~~~~~~~~~~~~~~~~--- 141 (340)
.|+.|.+||..+++.+..++.+..+ .++|+|++++++++.. ++.|.+||..+.+ ....++.
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~----~~~~i~~~~~ 102 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT----FEKEISLPPK 102 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC----EEEEEEECTT
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc----EEEEEEcCcc
Confidence 4789999999999988888776554 8999999999998863 6789999986543 2222221
Q ss_pred ---CCcceEEEEEcCCCe-EEEEe-C-CCeEEEEECCCCceEEEEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECC
Q psy15421 142 ---HTGYLSCCRFLDDNQ-IVTSS-G-DMSCALWDIETGQQCASFIGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIR 214 (340)
Q Consensus 142 ---~~~~v~~~~~~~~~~-l~~~~-~-d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~sg~~dg~i~~wd~~ 214 (340)
+......+.++++++ ++.+. . +++|.+||+.+++.+..+..+.+ ...+.+.|++ ..+++.+.||.+.+|++.
T Consensus 103 ~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~ 181 (361)
T 2oiz_A 103 RVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG-CWSVIPQPNRPRSFMTICGDGGLLTINLG 181 (361)
T ss_dssp BCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT-EEEEEECTTSSSEEEEEETTSSEEEEEEC
T ss_pred ccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC-cceeEEcCCCCeeEEEECCCCcEEEEEEC
Confidence 112334466777664 55444 3 68999999999987766222322 3335667765 678889999999999986
Q ss_pred C-Ceeee------EecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEE--EEeecCC--------cccceEEEE
Q psy15421 215 D-GSCKQ------TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL--AMYSHDN--------IICGITSVA 277 (340)
Q Consensus 215 ~-~~~~~------~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~--~~~~~~~--------~~~~i~~~~ 277 (340)
. ++... .+..+..++ .+.+.|++..++..+.++.+.++|+...... ..+.... ...+...++
T Consensus 182 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a 260 (361)
T 2oiz_A 182 EDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVG 260 (361)
T ss_dssp TTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEE
T ss_pred CCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEE
Confidence 5 44431 222222232 3344677777777888999999998754321 1111100 011122378
Q ss_pred EcCCCcEEEEEeC-----------CCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 278 FSRSGRLLLAGYD-----------DFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 278 ~s~~~~~l~~g~~-----------d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
|+|+++.+.++.. ...|.+||..+.+.+..+..+. +.+++|+|||++|+++.. ++|.|||
T Consensus 261 ~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D 331 (361)
T 2oiz_A 261 LHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYD 331 (361)
T ss_dssp EETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEE
T ss_pred EecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEE
Confidence 9999888777643 3479999999999999888776 999999999999998886 9999996
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.82 E-value=1.3e-17 Score=145.18 Aligned_cols=268 Identities=10% Similarity=0.053 Sum_probs=186.7
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEE
Q psy15421 56 AKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRV 135 (340)
Q Consensus 56 ~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~ 135 (340)
..|.+++|++++..+++.+.++.++.| .++....+..+...+..++|+|++++++++..++.|.+|+..++. ..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~--~~- 79 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE--IK- 79 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC--EE-
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc--EE-
Confidence 356788899998888888889999999 344556666666778899999999988888889999999876543 11
Q ss_pred EEeecCCCcceEEEEEcCCCeEEEEe-CC----CeEEEEECCCCceEEEEe--cCCCCeEEEEEcCCCCEEEEEeC----
Q psy15421 136 SRELPGHTGYLSCCRFLDDNQIVTSS-GD----MSCALWDIETGQQCASFI--GHTGDVMSLSLAPDMRTFVSGAC---- 204 (340)
Q Consensus 136 ~~~~~~~~~~v~~~~~~~~~~l~~~~-~d----~~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~sg~~---- 204 (340)
.....+...+..+.+.+++.++.+. .+ +.|.+||..+++....+. .+...+..++++|+++++++...
T Consensus 80 -~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~ 158 (333)
T 2dg1_A 80 -RPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYST 158 (333)
T ss_dssp -EEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTT
T ss_pred -EEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEecccccc
Confidence 1122345667888887776655444 44 589999998776543332 23456899999999988877654
Q ss_pred --CCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEE-EEEeCCCcEEEEeCcC-CcEEEEe------ecCCcccceE
Q psy15421 205 --DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF-ATGSDDATCRLFDIRA-DQELAMY------SHDNIICGIT 274 (340)
Q Consensus 205 --dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~d~~i~iwd~~~-~~~~~~~------~~~~~~~~i~ 274 (340)
.+.|..+|...++... +..+...++.++|+|+++.+ ++.+.++.|.+||... +..+..+ ..... ..+.
T Consensus 159 ~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~ 236 (333)
T 2dg1_A 159 NPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPD 236 (333)
T ss_dssp BCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEE
T ss_pred CCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCC
Confidence 3556666665544332 22233457899999999855 5555688999999863 2222111 11111 2467
Q ss_pred EEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCc------ceEEEEECCCCCEEEEeeCC
Q psy15421 275 SVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDN------RVSCLGVTEDGMAVATGSWD 333 (340)
Q Consensus 275 ~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~------~i~~~~~s~d~~~l~s~s~D 333 (340)
.++++++|+++++...++.|.+|+. +++.+..+..+.. .+.+++|+||+..|+.++.+
T Consensus 237 ~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 237 SCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred ceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 8999999999888888899999996 5555555543332 68999999998776655544
No 173
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.81 E-value=2.8e-15 Score=127.90 Aligned_cols=278 Identities=8% Similarity=-0.002 Sum_probs=196.1
Q ss_pred EecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeE-EeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccC
Q psy15421 50 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVH-AIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKT 128 (340)
Q Consensus 50 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~ 128 (340)
.+..+...+.+++++++++..++...++.|..||.. ++... ........+..+++++++.++++...++.+..|+..
T Consensus 9 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~- 86 (299)
T 2z2n_A 9 NLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK- 86 (299)
T ss_dssp ECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred cCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-
Confidence 455667789999999999988877778999999987 54332 223345678899999999988887778888888864
Q ss_pred CCCceEEEEeecCCCcceEEEEEcCCCeEE-EEeCCCeEEEEECCCCceEEE-EecCCCCeEEEEEcCCCCEEEEEeCCC
Q psy15421 129 REGNVRVSRELPGHTGYLSCCRFLDDNQIV-TSSGDMSCALWDIETGQQCAS-FIGHTGDVMSLSLAPDMRTFVSGACDA 206 (340)
Q Consensus 129 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~-~~~~d~~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~sg~~dg 206 (340)
+... ....+.....+..+.+.+++.+. +...++.|..||. +++.... .......+..+++.++++++++...++
T Consensus 87 --g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~ 162 (299)
T 2z2n_A 87 --GIIK-EYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNN 162 (299)
T ss_dssp --SCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTT
T ss_pred --CcEE-EEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCC
Confidence 2221 12233334456677776666554 4456789999998 5543322 222445689999999998888777789
Q ss_pred cEEEEECCCCeeeeE-ecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEE
Q psy15421 207 SAKLWDIRDGSCKQT-FPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLL 285 (340)
Q Consensus 207 ~i~~wd~~~~~~~~~-~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 285 (340)
.|..||. +++.... +..+...+.+++++++|..+++...++.|..||. +++.. .+........+..++++++|+++
T Consensus 163 ~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~ 239 (299)
T 2z2n_A 163 AIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EFKIPTPNARPHAITAGAGIDLW 239 (299)
T ss_dssp EEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECSTTCEE
T ss_pred EEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-EEECCCCCCCceeEEECCCCCEE
Confidence 9999998 6654432 3344556889999999998887777889999998 54432 23222223458899999999977
Q ss_pred EEEeCCCcEEEEeCCCceeeee-eccCCcceEEEEECCCCCEEEEeeCCCcEEe
Q psy15421 286 LAGYDDFNCNVWDSMKTERAGI-LAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 338 (340)
Q Consensus 286 ~~g~~d~~i~iw~~~~~~~~~~-~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~i 338 (340)
++...++.|..|+. ++..... +..+...+.++++ ++|.++++.+.++.+++
T Consensus 240 v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~ 291 (299)
T 2z2n_A 240 FTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKL 291 (299)
T ss_dssp EEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEE
T ss_pred EeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEE
Confidence 77767889999997 4443222 3355678999999 99988887665555443
No 174
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.79 E-value=3.3e-16 Score=136.91 Aligned_cols=254 Identities=11% Similarity=0.106 Sum_probs=167.6
Q ss_pred CcEEEEEEcCCCCeEEEEe---------CCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCC---Ce--E
Q psy15421 56 AKIYAMHWGSDSRNLVSAS---------QDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLD---NI--C 121 (340)
Q Consensus 56 ~~v~~~~~s~~~~~l~s~~---------~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d---~~--v 121 (340)
..+...++ ||+.++... .++.|.+||+.+++... + ..+..++|+|||++|+..+.+ +. +
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l 87 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEI 87 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceE
Confidence 34566667 788776542 36789999998876433 3 457788999999999887654 34 5
Q ss_pred EEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeC---------------------------CCeEEEEECCC
Q psy15421 122 SIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSG---------------------------DMSCALWDIET 173 (340)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~---------------------------d~~v~iwd~~~ 173 (340)
.+|++..+ ....... +.. +..+.|++++ .|+.++. ...|.+||+.+
T Consensus 88 ~~~~~~~g--~~~~l~~---~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 161 (347)
T 2gop_A 88 WVADLETL--SSKKILE---AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES 161 (347)
T ss_dssp EEEETTTT--EEEEEEE---ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTT
T ss_pred EEEECCCC--ceEEEEc---CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC
Confidence 55555432 2222221 223 7778888765 4665542 25688999988
Q ss_pred CceEEEEecCCCCeEEEEEcCCCCEEEEEeCCC-------cEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeC
Q psy15421 174 GQQCASFIGHTGDVMSLSLAPDMRTFVSGACDA-------SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD 246 (340)
Q Consensus 174 ~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg-------~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~ 246 (340)
++....+.. . .+..++|+|++ +++++..++ ...+|.+.+++.. .+..+ ..+..+ +|+|++++.++.
T Consensus 162 ~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~l~~~-~~~~~~--spdg~~l~~~~~ 234 (347)
T 2gop_A 162 EEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEE-KMFEK-VSFYAV--DSDGERILLYGK 234 (347)
T ss_dssp TEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEE-EEEEE-ESEEEE--EECSSCEEEEEC
T ss_pred CeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceE-EeccC-cceeeE--CCCCCEEEEEEc
Confidence 876445544 3 78899999999 777776542 3455544455543 33333 455554 999998888775
Q ss_pred C--------CcEEEEeCcCCcEEEEeecCCcccceEE-EEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEE
Q psy15421 247 D--------ATCRLFDIRADQELAMYSHDNIICGITS-VAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSC 317 (340)
Q Consensus 247 d--------~~i~iwd~~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~ 317 (340)
+ ..|.+|| +++...... .....+.. +.|+ ++ ++++++.++.+++| ..+++. ..+..+...|.+
T Consensus 235 ~~~~~~~~~~~l~~~d--~~~~~~l~~--~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~-~~~~~~~~~v~~ 306 (347)
T 2gop_A 235 PEKKYMSEHNKLYIYD--GKEVMGILD--EVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI-KPIAKGRHWIMG 306 (347)
T ss_dssp CSSSCCCSSCEEEEEC--SSCEEESST--TCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE-EEEECSSSEEEE
T ss_pred cccCCccccceEEEEC--CCceEeccc--cCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce-EEEecCCCeEEe
Confidence 4 3688888 343322221 22234665 8999 88 99999999999999 765544 334456788999
Q ss_pred EEECCCCCEEEEeeCCCcE-Eec
Q psy15421 318 LGVTEDGMAVATGSWDSFL-RIW 339 (340)
Q Consensus 318 ~~~s~d~~~l~s~s~D~~i-~iW 339 (340)
++|+| ..+++++.++.. +||
T Consensus 307 ~~~s~--~~~~~~~~~~~~~~l~ 327 (347)
T 2gop_A 307 FDVDE--IVVYLKETATRLRELF 327 (347)
T ss_dssp EEESS--SEEEEEECSSSCCEEE
T ss_pred eeeeC--cEEEEEcCCCChHHhe
Confidence 99999 577777777654 665
No 175
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.78 E-value=1.2e-15 Score=130.62 Aligned_cols=241 Identities=12% Similarity=0.072 Sum_probs=168.5
Q ss_pred EecCccCcEEEEEEcCCCC-eEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccC
Q psy15421 50 TLRGHLAKIYAMHWGSDSR-NLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKT 128 (340)
Q Consensus 50 ~~~~h~~~v~~~~~s~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~ 128 (340)
.+..+.....+++|+|+++ +++++..++.|..||..++ ...+..+...+..++++|+|+++++...++.|.+|+..+
T Consensus 22 ~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~ 99 (296)
T 3e5z_A 22 RLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPG 99 (296)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTT
T ss_pred EEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCC
Confidence 4556667788999999998 7888888999999998876 555666677789999999999888777778999999765
Q ss_pred CCCceEEEE-eecCC-CcceEEEEEcCCCeEEEE-----e-------------CCCeEEEEECCCCceEEEEecCCCCeE
Q psy15421 129 REGNVRVSR-ELPGH-TGYLSCCRFLDDNQIVTS-----S-------------GDMSCALWDIETGQQCASFIGHTGDVM 188 (340)
Q Consensus 129 ~~~~~~~~~-~~~~~-~~~v~~~~~~~~~~l~~~-----~-------------~d~~v~iwd~~~~~~~~~~~~~~~~v~ 188 (340)
+. ..... ..... ...+..+.+.+++.+..+ + ..+.|..++.. ++ ...+..+...+.
T Consensus 100 g~--~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~ 175 (296)
T 3e5z_A 100 GE--WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPN 175 (296)
T ss_dssp CC--EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEE
T ss_pred Cc--EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCc
Confidence 43 21111 11111 123345667666655442 2 12455555554 33 445556666789
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECC-CCee---eeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEe
Q psy15421 189 SLSLAPDMRTFVSGACDASAKLWDIR-DGSC---KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY 264 (340)
Q Consensus 189 ~~~~~~~~~~~~sg~~dg~i~~wd~~-~~~~---~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 264 (340)
.++|+|+++.+++.+.++.|.+||+. ++.. ...+..+...+.+++++++|..+++. ++.|.+||.. ++.+..+
T Consensus 176 gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~ 252 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRV 252 (296)
T ss_dssp EEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEE
T ss_pred cEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEE
Confidence 99999999988878889999999986 4544 23343345567789999999877766 7899999986 5555544
Q ss_pred ecCCcccceEEEEE-cCCCcEEEEEeCCCcEEEEeCCCce
Q psy15421 265 SHDNIICGITSVAF-SRSGRLLLAGYDDFNCNVWDSMKTE 303 (340)
Q Consensus 265 ~~~~~~~~i~~~~~-s~~~~~l~~g~~d~~i~iw~~~~~~ 303 (340)
.... . +++++| +|+++.|.+++.++ +.-++..+.+
T Consensus 253 ~~~~--~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~ 288 (296)
T 3e5z_A 253 LTPQ--T-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRG 288 (296)
T ss_dssp ECSS--C-CCEEEEESTTSCEEEEEETTE-EEEEECSCCB
T ss_pred ECCC--C-ceeEEEECCCCCEEEEEcCCe-EEEEEccccc
Confidence 4322 2 778899 68999999988875 4444544443
No 176
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.78 E-value=9.7e-17 Score=142.45 Aligned_cols=253 Identities=14% Similarity=0.046 Sum_probs=164.7
Q ss_pred EeCCCCCeeEEeeCCCCcEEE-----EEECCCCCEEEEEeC-CCe--EEEEEccCCCCceEEEEeecCCCcceEEEEEcC
Q psy15421 82 WDSYTTNKVHAIPLRSSWVMT-----CAYAPSGSFVACGGL-DNI--CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD 153 (340)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~-----v~~~~~~~~l~~~~~-d~~--v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 153 (340)
+|..++..+..+..+...... .+|+|||++|+.++. ++. +.+|++.+++ . .....++...+....|++
T Consensus 15 ~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~--~--~~lt~~~~~~~~~~~~sp 90 (388)
T 3pe7_A 15 QDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV--A--TQLTEGRGDNTFGGFLSP 90 (388)
T ss_dssp ECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCE--E--EECCCSSCBCSSSCEECT
T ss_pred ecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCc--e--EEeeeCCCCCccceEEcC
Confidence 466677777666666554544 789999999998887 664 6666665432 2 222334444443455777
Q ss_pred CC-eEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEE--EEcCCCCEEEEE----------------------eCCCcE
Q psy15421 154 DN-QIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSL--SLAPDMRTFVSG----------------------ACDASA 208 (340)
Q Consensus 154 ~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~sg----------------------~~dg~i 208 (340)
++ .|+.++.++.+.+||+.+++....+..+...+... .++|+++.++.. ..+..|
T Consensus 91 dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (388)
T 3pe7_A 91 DDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRL 170 (388)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceE
Confidence 65 67788888999999999988766665555544333 348999888742 245789
Q ss_pred EEEECCCCeeeeEecCCCCCeEEEEEec-CCCEEEEEeCC------CcEEEEeCcCCcEEEEeecCCcccceEEEEEcCC
Q psy15421 209 KLWDIRDGSCKQTFPGHESDINAVTFFP-NGWAFATGSDD------ATCRLFDIRADQELAMYSHDNIICGITSVAFSRS 281 (340)
Q Consensus 209 ~~wd~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d------~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~ 281 (340)
.+||+.+++... +..+...+..+.|+| +|+.++..+.+ ..|.++|............ .....+...+|+||
T Consensus 171 ~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~-~~~~~~~~~~~spd 248 (388)
T 3pe7_A 171 MRVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTH-AEGESCTHEFWVPD 248 (388)
T ss_dssp EEEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCC-CTTEEEEEEEECTT
T ss_pred EEEECCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeC-CCCcccccceECCC
Confidence 999999887544 334566789999999 99988877763 3788888765543322221 11123678899999
Q ss_pred CcEEEEEeC-CC----cEEEEeCCCceee--eeeccCCcc---eEEEEECCCCCEEEEe---------eCCCcEEecC
Q psy15421 282 GRLLLAGYD-DF----NCNVWDSMKTERA--GILAGHDNR---VSCLGVTEDGMAVATG---------SWDSFLRIWN 340 (340)
Q Consensus 282 ~~~l~~g~~-d~----~i~iw~~~~~~~~--~~~~~h~~~---i~~~~~s~d~~~l~s~---------s~D~~i~iW~ 340 (340)
|+.|+..+. ++ .|++||..+++.. ..+.++... ...++|+|||+.|+.. ..+..|++||
T Consensus 249 g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d 326 (388)
T 3pe7_A 249 GSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFN 326 (388)
T ss_dssp SSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEE
T ss_pred CCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEe
Confidence 997765443 22 3999998877642 233331111 1223799999987743 4466888885
No 177
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.77 E-value=1e-16 Score=152.53 Aligned_cols=255 Identities=15% Similarity=0.070 Sum_probs=162.7
Q ss_pred EEecCccCcEE---------EEEEc--CCCCe-EEEEeC-CCeEEEEeCC--C-CCeeEEeeC-----CCCcEEEEEECC
Q psy15421 49 RTLRGHLAKIY---------AMHWG--SDSRN-LVSASQ-DGKLIVWDSY--T-TNKVHAIPL-----RSSWVMTCAYAP 107 (340)
Q Consensus 49 ~~~~~h~~~v~---------~~~~s--~~~~~-l~s~~~-d~~i~iwd~~--~-~~~~~~~~~-----~~~~i~~v~~~~ 107 (340)
+.+..|...+. ...|+ ||++. |+.++. +..|.+|++. . ++ ...+.. |...+..++|+|
T Consensus 61 ~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~sp 139 (662)
T 3azo_A 61 ESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLP 139 (662)
T ss_dssp EESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEET
T ss_pred ceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECC
Confidence 45666766665 56565 99998 765544 5667777765 2 33 333433 556788999999
Q ss_pred CCCEEEEEeCC----------CeEEEEEccCCC----CceEEEEeec-CCCcceEEEEEcCCC-eEEEEeCC--------
Q psy15421 108 SGSFVACGGLD----------NICSIYSLKTRE----GNVRVSRELP-GHTGYLSCCRFLDDN-QIVTSSGD-------- 163 (340)
Q Consensus 108 ~~~~l~~~~~d----------~~v~i~~~~~~~----~~~~~~~~~~-~~~~~v~~~~~~~~~-~l~~~~~d-------- 163 (340)
||+.|++++.+ ..|.+|++.... +.. ..+. .+...+....|++++ .|+.++.+
T Consensus 140 Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~ 216 (662)
T 3azo_A 140 ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV---RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEG 216 (662)
T ss_dssp TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS---EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTC
T ss_pred CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce---eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCC
Confidence 99999998876 578888886521 222 2233 444566667788876 46656544
Q ss_pred CeEEEEECC-CC---ceEEEEecCCCCeEEEEEcCCCCEEEEEeCCC--cEEEEECCCCeeeeEecCCCCC--------e
Q psy15421 164 MSCALWDIE-TG---QQCASFIGHTGDVMSLSLAPDMRTFVSGACDA--SAKLWDIRDGSCKQTFPGHESD--------I 229 (340)
Q Consensus 164 ~~v~iwd~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg--~i~~wd~~~~~~~~~~~~h~~~--------v 229 (340)
..|.+||+. ++ +.......+...+..++|+||+++++++..++ .|.+||+.+++.......+... +
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~ 296 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGM 296 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTC
T ss_pred cEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccC
Confidence 379999998 56 33333344567899999999999888888888 5666676666654444433222 5
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEE--eCcCCcEEEEeecCCcccceEEE-EEcCCCcEEEEEeCCCc--EEEEeCCCcee
Q psy15421 230 NAVTFFPNGWAFATGSDDATCRLF--DIRADQELAMYSHDNIICGITSV-AFSRSGRLLLAGYDDFN--CNVWDSMKTER 304 (340)
Q Consensus 230 ~~v~~~~~~~~l~s~s~d~~i~iw--d~~~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~~g~~d~~--i~iw~~~~~~~ 304 (340)
..++|+|+++.+++++. +.+++| |...++ +..+... ...+..+ +++++.-++++++.+.. +..++..+++.
T Consensus 297 ~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~--~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~ 372 (662)
T 3azo_A 297 RWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGP--WTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRA 372 (662)
T ss_dssp CSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSS--CCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred ceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCC--CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCce
Confidence 67899999999999998 999999 544443 3333221 2235555 45444444445555544 45556556554
Q ss_pred eeeeccC
Q psy15421 305 AGILAGH 311 (340)
Q Consensus 305 ~~~~~~h 311 (340)
......|
T Consensus 373 ~~l~~~~ 379 (662)
T 3azo_A 373 RTIGARH 379 (662)
T ss_dssp EEEESCC
T ss_pred EEeecCC
Confidence 4333334
No 178
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.77 E-value=1.8e-17 Score=159.81 Aligned_cols=227 Identities=12% Similarity=0.049 Sum_probs=156.2
Q ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcc-----eEEEEEcCCCe-EEEEeCC---------C
Q psy15421 100 VMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGY-----LSCCRFLDDNQ-IVTSSGD---------M 164 (340)
Q Consensus 100 i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~-l~~~~~d---------~ 164 (340)
...+.|+|++.+++++ |+.|++|++.++.. ...+.+|... .....|+++++ ++.++.+ +
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNS----SVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTCCE----EEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCCce----EEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 4578999999999886 89999999987642 2234444432 12256777764 6666554 5
Q ss_pred eEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeE-ecCCCCCe--------------
Q psy15421 165 SCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT-FPGHESDI-------------- 229 (340)
Q Consensus 165 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~-~~~h~~~v-------------- 229 (340)
.+.+||+.+++. ..+..+...+...+|+|||+.++.+ .|+.|.+||+.++...+. ..++...+
T Consensus 93 ~~~~~d~~~~~~-~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 93 SYDIYDLNKRQL-ITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEEEETTTTEE-CCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTS
T ss_pred EEEEEECCCCcE-EEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhc
Confidence 677999998874 3466677889999999999999877 478999999988765432 22332222
Q ss_pred ---EEEEEecCCCEEEEEeCCC------------------------------------cEEEEeCcC---C---cEEEEe
Q psy15421 230 ---NAVTFFPNGWAFATGSDDA------------------------------------TCRLFDIRA---D---QELAMY 264 (340)
Q Consensus 230 ---~~v~~~~~~~~l~s~s~d~------------------------------------~i~iwd~~~---~---~~~~~~ 264 (340)
..+.|+|||++||.++.|. .|++||+.+ + +... +
T Consensus 171 ~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~-l 249 (740)
T 4a5s_A 171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQ-I 249 (740)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEE-E
T ss_pred CCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEE-e
Confidence 3589999999999876432 477888877 5 3222 2
Q ss_pred ecC----CcccceEEEEEcCCCcEEEEEeC----CCcEEEEeCCCce----ee--eee--ccCCcceE-----EEEECCC
Q psy15421 265 SHD----NIICGITSVAFSRSGRLLLAGYD----DFNCNVWDSMKTE----RA--GIL--AGHDNRVS-----CLGVTED 323 (340)
Q Consensus 265 ~~~----~~~~~i~~~~~s~~~~~l~~g~~----d~~i~iw~~~~~~----~~--~~~--~~h~~~i~-----~~~~s~d 323 (340)
... .....+..++|+|||+.++.... +..|.+||..+++ +. ..+ .+|...|. ..+||||
T Consensus 250 ~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspD 329 (740)
T 4a5s_A 250 TAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLD 329 (740)
T ss_dssp CCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTT
T ss_pred cCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCC
Confidence 110 12234789999999997766433 3479999988776 22 222 45766665 7899999
Q ss_pred CCEEE-Eee-CCCc
Q psy15421 324 GMAVA-TGS-WDSF 335 (340)
Q Consensus 324 ~~~l~-s~s-~D~~ 335 (340)
|+.|+ ..| .+|.
T Consensus 330 G~~l~~~~s~~~G~ 343 (740)
T 4a5s_A 330 GNSFYKIISNEEGY 343 (740)
T ss_dssp SSEEEEEEECTTSC
T ss_pred CCEEEEEEEcCCCc
Confidence 99877 665 4454
No 179
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.76 E-value=1.7e-15 Score=129.53 Aligned_cols=235 Identities=12% Similarity=0.085 Sum_probs=166.5
Q ss_pred eEEeeCCCCcEEEEEECCCCC-EEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEe-CCCeEE
Q psy15421 90 VHAIPLRSSWVMTCAYAPSGS-FVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSS-GDMSCA 167 (340)
Q Consensus 90 ~~~~~~~~~~i~~v~~~~~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~-~d~~v~ 167 (340)
+..+..+......++|+|+++ +++++..++.|..|+...+ . ..+..+...+..+.+.+++.++.+. .++.|.
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~---~---~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~ 93 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ---L---SPEMHPSHHQNGHCLNKQGHLIACSHGLRRLE 93 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC---E---EEEESSCSSEEEEEECTTCCEEEEETTTTEEE
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC---e---EEEECCCCCcceeeECCCCcEEEEecCCCeEE
Confidence 344445556678899999998 7778888999999997653 2 2233455667788887776655554 468999
Q ss_pred EEECCCCceEEEEecC----CCCeEEEEEcCCCCEEEE----Ee-------------CCCcEEEEECCCCeeeeEecCCC
Q psy15421 168 LWDIETGQQCASFIGH----TGDVMSLSLAPDMRTFVS----GA-------------CDASAKLWDIRDGSCKQTFPGHE 226 (340)
Q Consensus 168 iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~s----g~-------------~dg~i~~wd~~~~~~~~~~~~h~ 226 (340)
+||..+++........ ...+..++++|+++++++ |. ..+.|..++.. ++. ..+..+.
T Consensus 94 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~ 171 (296)
T 3e5z_A 94 RQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDR 171 (296)
T ss_dssp EECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCC
T ss_pred EEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCC
Confidence 9999877643322211 224668999999998887 33 13456666654 443 3444566
Q ss_pred CCeEEEEEecCCCEEEEEeCCCcEEEEeCc-CCcE---EEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCc
Q psy15421 227 SDINAVTFFPNGWAFATGSDDATCRLFDIR-ADQE---LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT 302 (340)
Q Consensus 227 ~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~-~~~~---~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~ 302 (340)
...+.++|+|+++.+++.+.++.|++|++. .+.. ...+ ......+..++++++|+++++. ++.|.+|+.. +
T Consensus 172 ~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~--~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g 246 (296)
T 3e5z_A 172 VKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF--TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-G 246 (296)
T ss_dssp SSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE--CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-S
T ss_pred CCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe--eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-C
Confidence 678999999999988888888999999986 3332 1222 1122335678999999977766 7889999964 7
Q ss_pred eeeeeeccCCcceEEEEE-CCCCCEEEEeeCCCcEEe
Q psy15421 303 ERAGILAGHDNRVSCLGV-TEDGMAVATGSWDSFLRI 338 (340)
Q Consensus 303 ~~~~~~~~h~~~i~~~~~-s~d~~~l~s~s~D~~i~i 338 (340)
+.+..+..+.. +++++| +|+++.|+.++.++..++
T Consensus 247 ~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~ 282 (296)
T 3e5z_A 247 DELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSI 282 (296)
T ss_dssp CEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEE
T ss_pred CEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEE
Confidence 77777777777 999999 689998998888876654
No 180
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.75 E-value=1.1e-13 Score=117.94 Aligned_cols=276 Identities=10% Similarity=0.011 Sum_probs=190.8
Q ss_pred ecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeE-EeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCC
Q psy15421 51 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVH-AIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTR 129 (340)
Q Consensus 51 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~ 129 (340)
+........+++++++++..++...++.|.+||.. ++... .+......+..+++.++++++++...++.|..++.. +
T Consensus 15 ~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 15 LSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence 34456688999999999988887788999999987 44332 223333568899999999988877777888888865 2
Q ss_pred CCceEEEEeecCCCcceEEEEEcCCCeE-EEEeCCCeEEEEECCCCceEEE-EecCCCCeEEEEEcCCCCEEEEEeCCCc
Q psy15421 130 EGNVRVSRELPGHTGYLSCCRFLDDNQI-VTSSGDMSCALWDIETGQQCAS-FIGHTGDVMSLSLAPDMRTFVSGACDAS 207 (340)
Q Consensus 130 ~~~~~~~~~~~~~~~~v~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~sg~~dg~ 207 (340)
... ....+........+.+.+++.+ ++...++.|..+|.. ++.... +......+..+++.++++++++...++.
T Consensus 93 --~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~ 168 (300)
T 2qc5_A 93 --GFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNS 168 (300)
T ss_dssp --CEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE
T ss_pred --CeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCe
Confidence 221 2223333345666777666554 444457899999987 554322 2223456889999999997777777889
Q ss_pred EEEEECCCCeeee-EecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEE
Q psy15421 208 AKLWDIRDGSCKQ-TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLL 286 (340)
Q Consensus 208 i~~wd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 286 (340)
|..+|. +++... ....+...+.+++++++|..+++....+.|..||. .++... +........+.+++++++|++++
T Consensus 169 i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v 245 (300)
T 2qc5_A 169 IGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISE-YDIPTPNARPHAITAGKNSEIWF 245 (300)
T ss_dssp EEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEE
T ss_pred EEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEE-EECCCCCCCceEEEECCCCCEEE
Confidence 999998 555433 22334456889999999988887777788999998 333322 22222233578999999999777
Q ss_pred EEeCCCcEEEEeCCCceee-eeeccCCcceEEEEECCCCCEEEEeeCCCcEEe
Q psy15421 287 AGYDDFNCNVWDSMKTERA-GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 338 (340)
Q Consensus 287 ~g~~d~~i~iw~~~~~~~~-~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~i 338 (340)
+...++.|..|+. ++... ..+......+.+++++++|.++++.. + .|..
T Consensus 246 ~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~ 295 (300)
T 2qc5_A 246 TEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGK 295 (300)
T ss_dssp EETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEE
T ss_pred eccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEE
Confidence 7767789999997 44332 22333456788999999999777665 4 4443
No 181
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.75 E-value=1.7e-15 Score=127.54 Aligned_cols=235 Identities=8% Similarity=-0.025 Sum_probs=163.9
Q ss_pred cEEEEEECCCCCEEE-EEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceE
Q psy15421 99 WVMTCAYAPSGSFVA-CGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQC 177 (340)
Q Consensus 99 ~i~~v~~~~~~~~l~-~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~ 177 (340)
....+++++++++++ +...++.|.+|+...... ......+......+.+.+++.+..+..++.|..||.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGT----TVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC---------EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCccc----ceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEe
Confidence 567889999999777 546788898888643321 111112223455566766665555555889999998765432
Q ss_pred EEEe-cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCc
Q psy15421 178 ASFI-GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR 256 (340)
Q Consensus 178 ~~~~-~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 256 (340)
.+. .....+..+++.|+++++++...++.|.+|+..+.............+.+++++|+|+.+++...++.|.+||..
T Consensus 101 -~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 101 -VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp -ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTT
T ss_pred -eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecC
Confidence 222 223568899999999988887788999999866544332222233457889999999988888778999999987
Q ss_pred CCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcE
Q psy15421 257 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL 336 (340)
Q Consensus 257 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i 336 (340)
........ ... ...+..++++|+|.++++...++.|.+|+............+...+.+++++++|+.+++.+.++.|
T Consensus 180 ~~~~~~~~-~~~-~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v 257 (270)
T 1rwi_B 180 SNNQVVLP-FTD-ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRV 257 (270)
T ss_dssp TCCEEECC-CSS-CCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEE
T ss_pred CCceEeec-ccC-CCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEE
Confidence 65443221 111 1357899999999888888788899999976544333333445678999999999999999999999
Q ss_pred EecC
Q psy15421 337 RIWN 340 (340)
Q Consensus 337 ~iW~ 340 (340)
++++
T Consensus 258 ~~~~ 261 (270)
T 1rwi_B 258 VKLT 261 (270)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9875
No 182
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.75 E-value=2.5e-15 Score=144.09 Aligned_cols=247 Identities=10% Similarity=0.079 Sum_probs=169.2
Q ss_pred CccCcEEEEEEcCCCCeEEEEeCCC-----eEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCe-------
Q psy15421 53 GHLAKIYAMHWGSDSRNLVSASQDG-----KLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNI------- 120 (340)
Q Consensus 53 ~h~~~v~~~~~s~~~~~l~s~~~d~-----~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~------- 120 (340)
+|...+..++|||||++|+.++.++ .|++||+.+++.......+ ..+..++|+|||+.|+.+..++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 3445688999999999998776543 8999999988765432211 12557899999999999887765
Q ss_pred ---------EEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCe-EEEEeC-----CCeEEEEECCC------Cc-eEE
Q psy15421 121 ---------CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IVTSSG-----DMSCALWDIET------GQ-QCA 178 (340)
Q Consensus 121 ---------v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~-----d~~v~iwd~~~------~~-~~~ 178 (340)
|.+|++.++...-........|...+....|++++. |+.++. +..|.+||+.+ +. ...
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 899998765432223333344556666778887764 554443 57899999986 43 355
Q ss_pred EEecCCCCeEEEEEcCCCCEEEEEeCC----CcEEEEECCCCe--eeeEecCCCC--CeEEEEEecCCCEEEEEeCCCc-
Q psy15421 179 SFIGHTGDVMSLSLAPDMRTFVSGACD----ASAKLWDIRDGS--CKQTFPGHES--DINAVTFFPNGWAFATGSDDAT- 249 (340)
Q Consensus 179 ~~~~~~~~v~~~~~~~~~~~~~sg~~d----g~i~~wd~~~~~--~~~~~~~h~~--~v~~v~~~~~~~~l~s~s~d~~- 249 (340)
.+..+...+.. .|+|+++.++..+.+ +.|.+||+.++. ....+..|.. .+..++|++++..+++...|+.
T Consensus 281 ~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~ 359 (710)
T 2xdw_A 281 KLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKN 359 (710)
T ss_dssp EEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEE
T ss_pred EeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEE
Confidence 66666665554 478888877655543 469999998764 2244444443 6788999988888899988885
Q ss_pred -EEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEe----CCCcEEEEeCCCce
Q psy15421 250 -CRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY----DDFNCNVWDSMKTE 303 (340)
Q Consensus 250 -i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~----~d~~i~iw~~~~~~ 303 (340)
|++||+.+++.+..+... ...+..+.++|+++.++... ..+++..||..+++
T Consensus 360 ~l~~~~~~~g~~~~~l~~~--~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 360 TLQLHDLATGALLKIFPLE--VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEETTTCCEEEEECCC--SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEECCCCCEEEecCCC--CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 556676555554444322 33477889999987766432 34789999987765
No 183
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.73 E-value=2.1e-16 Score=140.41 Aligned_cols=241 Identities=11% Similarity=-0.017 Sum_probs=153.3
Q ss_pred EeCCCCCeeEEeeCCCCc-----EEEEEECCCCCEEEEEeCC---CeEEEEEccCCCCceEEEEeecCCCcceEEEEEcC
Q psy15421 82 WDSYTTNKVHAIPLRSSW-----VMTCAYAPSGSFVACGGLD---NICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD 153 (340)
Q Consensus 82 wd~~~~~~~~~~~~~~~~-----i~~v~~~~~~~~l~~~~~d---~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 153 (340)
.|..+++.+..+..+... +..++|+|+|++++..... ..+.+|++..++ .. .....+........|++
T Consensus 15 ~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~--~~--~l~~~~~~~~~~~~~sp 90 (396)
T 3c5m_A 15 VDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ--AV--QLTEGKGDNTFGGFIST 90 (396)
T ss_dssp ECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE--EE--ECCCSSCBCTTTCEECT
T ss_pred ecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCc--EE--EeecCCCCccccceECC
Confidence 366666665555443222 5567899999998776543 356777765432 11 11122222222245676
Q ss_pred CC-eEEEEeCCCeEEEEECCCCceEEEEecCCCCeEE-------------------EEEcCCCCEEEEE-----eCCCcE
Q psy15421 154 DN-QIVTSSGDMSCALWDIETGQQCASFIGHTGDVMS-------------------LSLAPDMRTFVSG-----ACDASA 208 (340)
Q Consensus 154 ~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~~~sg-----~~dg~i 208 (340)
++ .|+.++.++.+.+||+.+++.......+...... +.++|+++.++.. ..+..|
T Consensus 91 dg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l 170 (396)
T 3c5m_A 91 DERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRL 170 (396)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceE
Confidence 65 5778888889999999988765444434332222 3457777766543 467789
Q ss_pred EEEECCCCeeeeEecCCCCCeEEEEEec-CCCEEEEEeCC------CcEEEEeCcCCcEEEEeecCCcccceEEEEEcCC
Q psy15421 209 KLWDIRDGSCKQTFPGHESDINAVTFFP-NGWAFATGSDD------ATCRLFDIRADQELAMYSHDNIICGITSVAFSRS 281 (340)
Q Consensus 209 ~~wd~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d------~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~ 281 (340)
.+||+.+++..... .+...+..+.|+| ++..++..+.+ ..|.+||....+...... ......+..++|+|+
T Consensus 171 ~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spd 248 (396)
T 3c5m_A 171 IKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPD 248 (396)
T ss_dssp EEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEEEECTT
T ss_pred EEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCCCccccceEECCC
Confidence 99999988765444 4566789999999 78877766543 358888886554332222 111224778899999
Q ss_pred CcEEEEEeCC-----CcEEEEeCCCceeeeeeccCCcceEEEEECC-CCCEEEEee
Q psy15421 282 GRLLLAGYDD-----FNCNVWDSMKTERAGILAGHDNRVSCLGVTE-DGMAVATGS 331 (340)
Q Consensus 282 ~~~l~~g~~d-----~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~-d~~~l~s~s 331 (340)
|++|+.++.+ +.|++||..+++...... ... .. +.|+| ||++|+.++
T Consensus 249 g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~-~~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 249 GSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MPP-CS-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp SSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CCS-EE-EEEECSSSSEEEEEE
T ss_pred CCEEEEEecCCCCccceEEEEECCCCCeEEeee-CCC-CC-CCccCCCCceEEEec
Confidence 9987776544 449999987765433221 112 23 88999 999888765
No 184
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.73 E-value=7.3e-15 Score=127.66 Aligned_cols=255 Identities=9% Similarity=-0.021 Sum_probs=175.7
Q ss_pred CCCeEEEEeCCCCCeeEEee------CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEE
Q psy15421 75 QDGKLIVWDSYTTNKVHAIP------LRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSC 148 (340)
Q Consensus 75 ~d~~i~iwd~~~~~~~~~~~------~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~ 148 (340)
.+++|.++|..+++....+. ........+.+. +++.+++...++.|.++|..+++ ....++. ......
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~----~~~~i~~-~~~p~~ 88 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFK----EVGRITG-FTSPRY 88 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCC----EEEEEEC-CSSEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccE----EEEEcCC-CCCCcE
Confidence 48999999999887654331 111334566664 45555666678999999987654 2223332 233455
Q ss_pred EEEcCCCeEEEEe-CCCeEEEEECCCCceEEEEecCC-----CCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeeeeE
Q psy15421 149 CRFLDDNQIVTSS-GDMSCALWDIETGQQCASFIGHT-----GDVMSLSLAPDMRTFVSGA-CDASAKLWDIRDGSCKQT 221 (340)
Q Consensus 149 ~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~sg~-~dg~i~~wd~~~~~~~~~ 221 (340)
+.+.+++++..+. .++.|.+||+.+++....+.... ..+..+++ .+++.+++.. .++.|.++|.++++....
T Consensus 89 i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~ 167 (328)
T 3dsm_A 89 IHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDE 167 (328)
T ss_dssp EEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEE
T ss_pred EEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEE
Confidence 6664555665555 79999999999988776655322 14556777 4444555544 489999999999988777
Q ss_pred ecCCCCCeEEEEEecCCCEEEEEeCC----------CcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCC
Q psy15421 222 FPGHESDINAVTFFPNGWAFATGSDD----------ATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD 291 (340)
Q Consensus 222 ~~~h~~~v~~v~~~~~~~~l~s~s~d----------~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d 291 (340)
++. ......++++|+|+.++++..+ +.|.++|..+.+....+.... ...+..++|+|++++|.++..
T Consensus 168 i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~-g~~p~~la~~~d~~~lyv~~~- 244 (328)
T 3dsm_A 168 LTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL-GDWPSEVQLNGTRDTLYWINN- 244 (328)
T ss_dssp EEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT-TCCCEEEEECTTSCEEEEESS-
T ss_pred EEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC-CCCceeEEEecCCCEEEEEcc-
Confidence 764 3345688999999988877665 789999998877655543221 124789999999998888755
Q ss_pred CcEEEEeCCCceeee--eeccCCcceEEEEECC-CCCEEEEe----eCCCcEEecC
Q psy15421 292 FNCNVWDSMKTERAG--ILAGHDNRVSCLGVTE-DGMAVATG----SWDSFLRIWN 340 (340)
Q Consensus 292 ~~i~iw~~~~~~~~~--~~~~h~~~i~~~~~s~-d~~~l~s~----s~D~~i~iW~ 340 (340)
.|.+||..+++... .+..+......++++| ++..+++. +.++.|.+||
T Consensus 245 -~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d 299 (328)
T 3dsm_A 245 -DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYS 299 (328)
T ss_dssp -SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEEC
T ss_pred -EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEEC
Confidence 89999987766432 1222246788999999 56667776 6788999986
No 185
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.73 E-value=6.6e-15 Score=141.21 Aligned_cols=236 Identities=12% Similarity=0.020 Sum_probs=160.6
Q ss_pred CcEEEEEECCCCCEEEEEeCCC-----eEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCe------
Q psy15421 98 SWVMTCAYAPSGSFVACGGLDN-----ICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMS------ 165 (340)
Q Consensus 98 ~~i~~v~~~~~~~~l~~~~~d~-----~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~------ 165 (340)
..+..++|||||++|+.+..++ .|++||+.+++.. ...+.. ..+..+.|++++ .|+.++.++.
T Consensus 125 ~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~---~~~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 125 VALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKEL---PDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDG 199 (710)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEE---EEEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSS
T ss_pred EEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCC---cccccC--cccceEEEEeCCCEEEEEEECCccccccc
Confidence 3577899999999998776543 8999999765421 111211 114456788765 5777766655
Q ss_pred ----------EEEEECCCCceE--EEEec--CCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEECCC------Ce-ee
Q psy15421 166 ----------CALWDIETGQQC--ASFIG--HTGDVMSLSLAPDMRTFVSGAC-----DASAKLWDIRD------GS-CK 219 (340)
Q Consensus 166 ----------v~iwd~~~~~~~--~~~~~--~~~~v~~~~~~~~~~~~~sg~~-----dg~i~~wd~~~------~~-~~ 219 (340)
|.+|++.+++.. ..+.. +...+..+.|+||+++++.++. +..|.+||+.+ +. ..
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 279 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKW 279 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCC
T ss_pred cccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccce
Confidence 999999887632 22222 4555789999999998887654 67899999976 43 34
Q ss_pred eEecCCCCCeEEEEEecCCCEEEEEeCC----CcEEEEeCcCCcE---EEEeecCCcccceEEEEEcCCCcEEEEEeCCC
Q psy15421 220 QTFPGHESDINAVTFFPNGWAFATGSDD----ATCRLFDIRADQE---LAMYSHDNIICGITSVAFSRSGRLLLAGYDDF 292 (340)
Q Consensus 220 ~~~~~h~~~v~~v~~~~~~~~l~s~s~d----~~i~iwd~~~~~~---~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~ 292 (340)
..+..+...+.. .|+|+|..|+..+.+ +.|.+||+.+... .....+.. ...+..+.|++++.++++...|+
T Consensus 280 ~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~lv~~~~~~g 357 (710)
T 2xdw_A 280 VKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE-KDVLEWVACVRSNFLVLCYLHDV 357 (710)
T ss_dssp EEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS-SCEEEEEEEETTTEEEEEEEETT
T ss_pred EEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC-CCeEEEEEEEcCCEEEEEEEECC
Confidence 556566665554 488888887766553 3599999876531 22222222 12477889998888999999998
Q ss_pred c--EEEEeCCCceeeeeeccCCcceEEEEECCCCCEEE-Eee---CCCcEEecC
Q psy15421 293 N--CNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVA-TGS---WDSFLRIWN 340 (340)
Q Consensus 293 ~--i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~-s~s---~D~~i~iW~ 340 (340)
. |.+|+..+++....+..+.+.|..++++|++..|+ +.+ ..++|.+||
T Consensus 358 ~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d 411 (710)
T 2xdw_A 358 KNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCD 411 (710)
T ss_dssp EEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEE
T ss_pred EEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEE
Confidence 5 55667656776677777888899999999997655 322 246777764
No 186
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.73 E-value=5.1e-15 Score=129.31 Aligned_cols=234 Identities=9% Similarity=0.056 Sum_probs=153.1
Q ss_pred CcEEEEEEcCCCCeEEEEeCC---C--eEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCC------------
Q psy15421 56 AKIYAMHWGSDSRNLVSASQD---G--KLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLD------------ 118 (340)
Q Consensus 56 ~~v~~~~~s~~~~~l~s~~~d---~--~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d------------ 118 (340)
..+..++|+|||+.|+.++.+ + .|.+||+.+++.......+ . +..++|+|+|+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 457889999999999887754 3 3778888877655444433 3 8899999999998887643
Q ss_pred ---------------CeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCC------C-eEEEEECCCCce
Q psy15421 119 ---------------NICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGD------M-SCALWDIETGQQ 176 (340)
Q Consensus 119 ---------------~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d------~-~v~iwd~~~~~~ 176 (340)
..+.+|++.+++.. .... . . .+....|++++.++++..+ . ...+|.+.+++
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~-~~l~---~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~- 209 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEEVI-EEFE---K-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGK- 209 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTEEE-EEEE---E-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTE-
T ss_pred cceeecCcccccCccceEEEEECCCCeEE-eeec---C-C-CcccccCCCCeEEEEEecccccccccccccEEEeCCCc-
Confidence 45777887654310 1111 1 2 4566777777744444443 2 44555544443
Q ss_pred EEEEecCCCCeEEEEEcCCCCEEEEEeCC--------CcEEEEECCCCeeeeEecCCCCCeEE-EEEecCCCEEEEEeCC
Q psy15421 177 CASFIGHTGDVMSLSLAPDMRTFVSGACD--------ASAKLWDIRDGSCKQTFPGHESDINA-VTFFPNGWAFATGSDD 247 (340)
Q Consensus 177 ~~~~~~~~~~v~~~~~~~~~~~~~sg~~d--------g~i~~wd~~~~~~~~~~~~h~~~v~~-v~~~~~~~~l~s~s~d 247 (340)
...+..+ ..+..+ +|+++.++.++.+ ..|.+|| +++......+|...+.. +.|+ ++ .+++++.+
T Consensus 210 ~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~ 282 (347)
T 2gop_A 210 EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEE 282 (347)
T ss_dssp EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEET
T ss_pred eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecC
Confidence 3444444 445544 9999988876654 3688888 56555555666777886 8999 88 99999999
Q ss_pred CcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcE-EEEeCCCceeeeeeccCCc
Q psy15421 248 ATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNC-NVWDSMKTERAGILAGHDN 313 (340)
Q Consensus 248 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i-~iw~~~~~~~~~~~~~h~~ 313 (340)
+.+++| +..++....... ...+.+++|+| .++++++.++.. ++|... ++ ...+..|..
T Consensus 283 ~~~~l~-~~~g~~~~~~~~---~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~ 341 (347)
T 2gop_A 283 GSVNLY-IWDGEIKPIAKG---RHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYND 341 (347)
T ss_dssp TEEEEE-EESSSEEEEECS---SSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTS
T ss_pred CcEEEE-EcCCceEEEecC---CCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccH
Confidence 999999 875444333322 23588999999 677777766654 677654 33 344555543
No 187
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.72 E-value=6.8e-14 Score=121.54 Aligned_cols=242 Identities=10% Similarity=0.033 Sum_probs=166.0
Q ss_pred EEeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCC----CeE
Q psy15421 46 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLD----NIC 121 (340)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d----~~v 121 (340)
.....+.++...+.+++|++++++++++..++.|.+||..+++.......+...+..++++|+++++++...+ +.|
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i 114 (333)
T 2dg1_A 35 EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGI 114 (333)
T ss_dssp EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEE
T ss_pred ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceE
Confidence 3445677788888999999999988888899999999998877654443456779999999999988877666 678
Q ss_pred EEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeC-------CCeEEEEECCCCceEEEEecCCCCeEEEEEcC
Q psy15421 122 SIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSG-------DMSCALWDIETGQQCASFIGHTGDVMSLSLAP 194 (340)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~-------d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 194 (340)
.+|+...+... .......+...+..+.+.+++.+..+.. .+.|..+|..+++. ..+......+..++|+|
T Consensus 115 ~~~d~~~~~~~--~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~i~~~~ 191 (333)
T 2dg1_A 115 FAATENGDNLQ--DIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV-TPIIQNISVANGIALST 191 (333)
T ss_dssp EEECTTSCSCE--EEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE-EEEEEEESSEEEEEECT
T ss_pred EEEeCCCCEEE--EEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEE-EEeecCCCcccceEECC
Confidence 88987654321 1111112344577778877776555544 24566666655443 23333334578999999
Q ss_pred CCCEE-EEEeCCCcEEEEECCC-Ceeee--------EecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEe
Q psy15421 195 DMRTF-VSGACDASAKLWDIRD-GSCKQ--------TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY 264 (340)
Q Consensus 195 ~~~~~-~sg~~dg~i~~wd~~~-~~~~~--------~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 264 (340)
+++.+ ++.+.++.|.+||+++ +.... .+.++ ..+..++++++|..+++...++.|.+||.. ++.+..+
T Consensus 192 dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~~~~~ 269 (333)
T 2dg1_A 192 DEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYPIGQI 269 (333)
T ss_dssp TSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCEEEEE
T ss_pred CCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC-CCEEEEE
Confidence 99855 4556689999999863 33221 12222 357889999999988888888999999984 4454444
Q ss_pred ecCCc----ccceEEEEEcCCCcEEEEEeCCC
Q psy15421 265 SHDNI----ICGITSVAFSRSGRLLLAGYDDF 292 (340)
Q Consensus 265 ~~~~~----~~~i~~~~~s~~~~~l~~g~~d~ 292 (340)
..... ...+.+++|+|+++.|++++.++
T Consensus 270 ~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 270 LIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp ECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred EcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 32221 11378899999987777666553
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.72 E-value=3e-16 Score=150.14 Aligned_cols=247 Identities=10% Similarity=-0.028 Sum_probs=164.5
Q ss_pred CccCcEEEEEEcCCCCeEE-----EEeCCCeEEEEeCCCCCee-EEeeCCCCcEEEEEECCCCCEEEEEeCCCe------
Q psy15421 53 GHLAKIYAMHWGSDSRNLV-----SASQDGKLIVWDSYTTNKV-HAIPLRSSWVMTCAYAPSGSFVACGGLDNI------ 120 (340)
Q Consensus 53 ~h~~~v~~~~~s~~~~~l~-----s~~~d~~i~iwd~~~~~~~-~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~------ 120 (340)
+|...+..++|||||++|+ +|+.+.+|++||+.+++.+ .. .........++|+|||+.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~ 196 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD-VIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVD 196 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC-CBSCCTTCCCEECTTSSEEEEEECCCCTTSCGG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc-ccCcccccceEEecCCCEEEEEEecCCCCCccc
Confidence 4656789999999999988 4445678999999988764 21 111111257889999999999988776
Q ss_pred -------EEEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCC----eEEEEECCCCceEEEEecCCCCeE
Q psy15421 121 -------CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDM----SCALWDIETGQQCASFIGHTGDVM 188 (340)
Q Consensus 121 -------v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~----~v~iwd~~~~~~~~~~~~~~~~v~ 188 (340)
|++|++.++...-........+...+....+++++ .++.++.++ .|.+|+..+++ ...+..+...+.
T Consensus 197 ~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~ 275 (695)
T 2bkl_A 197 ERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKY 275 (695)
T ss_dssp GGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCE
T ss_pred cCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceE
Confidence 99999876543323334444565677778888776 466555544 56667665544 345555555566
Q ss_pred EEEEcCCCCEEEEEe---CCCcEEEEECCCCee---eeEecCC-CCCeEEEEEecCCCEEEEEeCCCcEEEEeCc-CCcE
Q psy15421 189 SLSLAPDMRTFVSGA---CDASAKLWDIRDGSC---KQTFPGH-ESDINAVTFFPNGWAFATGSDDATCRLFDIR-ADQE 260 (340)
Q Consensus 189 ~~~~~~~~~~~~sg~---~dg~i~~wd~~~~~~---~~~~~~h-~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~-~~~~ 260 (340)
...+ +++.+++... .++.|.+||+.++.. ...+..+ ...+..++++ ++..+++...|+..++|.+. .++.
T Consensus 276 ~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~ 353 (695)
T 2bkl_A 276 EVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKP 353 (695)
T ss_dssp EEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCE
T ss_pred EEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCe
Confidence 6666 4555444444 368999999987653 3333333 4457888888 67788999999998888765 3333
Q ss_pred EEEeecCCcccceEEEEEcCCCcEEEEEe----CCCcEEEEeCCCcee
Q psy15421 261 LAMYSHDNIICGITSVAFSRSGRLLLAGY----DDFNCNVWDSMKTER 304 (340)
Q Consensus 261 ~~~~~~~~~~~~i~~~~~s~~~~~l~~g~----~d~~i~iw~~~~~~~ 304 (340)
+..+.... ...+..+.++|+++.++... ..++|++||..+++.
T Consensus 354 ~~~l~~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 354 VRTVQLPG-VGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEECCCSS-SSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred eEEecCCC-CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 33332111 22366778899998777433 347899999877653
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.71 E-value=8e-15 Score=123.40 Aligned_cols=239 Identities=8% Similarity=-0.032 Sum_probs=163.3
Q ss_pred cEEEEEEcCCCCeEE-EEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEE
Q psy15421 57 KIYAMHWGSDSRNLV-SASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRV 135 (340)
Q Consensus 57 ~v~~~~~s~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~ 135 (340)
...++++++++++++ +...++.|.+||..+.........+...+..++++++++++++.. ++.|.+|+..... ..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~--~~- 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNN--QT- 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSC--CE-
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCce--Ee-
Confidence 668899999999777 557789999999765443222122234567889999999766655 8889999875432 11
Q ss_pred EEeecCCCcceEEEEEcCCCeE-EEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy15421 136 SRELPGHTGYLSCCRFLDDNQI-VTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIR 214 (340)
Q Consensus 136 ~~~~~~~~~~v~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~ 214 (340)
............+.+.+++.+ ++...++.|.+|+..+.............+..++++|+++++++...++.|.+||..
T Consensus 101 -~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 101 -VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp -ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTT
T ss_pred -eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecC
Confidence 111122234566777666554 444567889999866544332222233457889999999988887778999999987
Q ss_pred CCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcE
Q psy15421 215 DGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNC 294 (340)
Q Consensus 215 ~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i 294 (340)
..........+...+.+++++++|..+++...++.|.+||........ ..... ...+..++++|+|+++++...++.|
T Consensus 180 ~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~~~~-~~~p~~i~~~~~g~l~v~~~~~~~v 257 (270)
T 1rwi_B 180 SNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LPFTG-LNTPLAVAVDSDRTVYVADRGNDRV 257 (270)
T ss_dssp TCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CCCCS-CSCEEEEEECTTCCEEEEEGGGTEE
T ss_pred CCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-eccCC-CCCceeEEECCCCCEEEEECCCCEE
Confidence 765443333333668899999999888888888999999987543322 21111 2347899999999999999999999
Q ss_pred EEEeCCCc
Q psy15421 295 NVWDSMKT 302 (340)
Q Consensus 295 ~iw~~~~~ 302 (340)
++++....
T Consensus 258 ~~~~~~~~ 265 (270)
T 1rwi_B 258 VKLTSLEH 265 (270)
T ss_dssp EEECCCGG
T ss_pred EEEcCCCc
Confidence 99996544
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.71 E-value=3.9e-14 Score=123.04 Aligned_cols=243 Identities=10% Similarity=-0.062 Sum_probs=169.0
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEE
Q psy15421 56 AKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRV 135 (340)
Q Consensus 56 ~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~ 135 (340)
.....+.+. +++.+++...++.|.+||..+++.+..+.. ......++++++++.+++...++.|.+||..+.. +
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~----~ 117 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYE----I 117 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTE----E
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCe----E
Confidence 345677774 455666667789999999999998887754 3557888998888555554488999999987643 2
Q ss_pred EEeecCCC-----cceEEEEEcCCCeEEEEe--CCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCC---
Q psy15421 136 SRELPGHT-----GYLSCCRFLDDNQIVTSS--GDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACD--- 205 (340)
Q Consensus 136 ~~~~~~~~-----~~v~~~~~~~~~~l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~d--- 205 (340)
...++... .....+.+ +++.+..+. .++.|.++|+.+++....+.. ......++++|++++++++..+
T Consensus 118 ~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~ 195 (328)
T 3dsm_A 118 TGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEG 195 (328)
T ss_dssp EEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTT
T ss_pred EEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-CCCccceEEcCCCCEEEEECCCccC
Confidence 22222111 02223334 455555554 388999999999887776654 3346788999999988877665
Q ss_pred -------CcEEEEECCCCeeeeEecCC-CCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEE
Q psy15421 206 -------ASAKLWDIRDGSCKQTFPGH-ESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVA 277 (340)
Q Consensus 206 -------g~i~~wd~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~ 277 (340)
+.|.++|.++++....+.-. ......++++|++..+..+.. .|.+||..+.+.............+..++
T Consensus 196 ~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~ 273 (328)
T 3dsm_A 196 SPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLT 273 (328)
T ss_dssp CSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEE
T ss_pred CccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEE
Confidence 89999999998877666432 236889999999888877654 89999988765421100010023478899
Q ss_pred EcC-CCcEEEEE----eCCCcEEEEeCCCceeeeeec
Q psy15421 278 FSR-SGRLLLAG----YDDFNCNVWDSMKTERAGILA 309 (340)
Q Consensus 278 ~s~-~~~~l~~g----~~d~~i~iw~~~~~~~~~~~~ 309 (340)
++| ++.++++. ..++.|.+|+.. ++.+..+.
T Consensus 274 vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 274 VNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFY 309 (328)
T ss_dssp ECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEE
T ss_pred EcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEE
Confidence 999 56666666 678899999976 77666553
No 191
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.70 E-value=3.3e-15 Score=142.92 Aligned_cols=237 Identities=11% Similarity=-0.017 Sum_probs=156.1
Q ss_pred CCCcEEEEEECCCCCEEE-----EEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCCe----
Q psy15421 96 RSSWVMTCAYAPSGSFVA-----CGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMS---- 165 (340)
Q Consensus 96 ~~~~i~~v~~~~~~~~l~-----~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~---- 165 (340)
|...+..++|||||++|| .|+.+..|++||+.+++... ...+.... ...+.|++++ .|+.++.|..
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~--~~~~~wspDg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGK--YATPKWTPDSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCT--TCCCEECTTSSEEEEEECCCCTTSC
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCccc--ccceEEecCCCEEEEEEecCCCCCc
Confidence 444688899999999998 34445789999998764210 01111111 1456787775 5777777665
Q ss_pred ---------EEEEECCCCce----EEEEecCCCCeEEEEEcCCCCEEEEEeCCC----cEEEEECCCCeeeeEecCCCCC
Q psy15421 166 ---------CALWDIETGQQ----CASFIGHTGDVMSLSLAPDMRTFVSGACDA----SAKLWDIRDGSCKQTFPGHESD 228 (340)
Q Consensus 166 ---------v~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg----~i~~wd~~~~~~~~~~~~h~~~ 228 (340)
|.+|++.+++. +.....+...+..+.|+||+++++.++.++ .|.+|+..++.. ..+..+...
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~ 273 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGA 273 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSC
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCc
Confidence 99999988762 222223456788999999999988777666 777777655543 344445555
Q ss_pred eEEEEEecCCCEEEEEe---CCCcEEEEeCcCCcE---EEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCC-C
Q psy15421 229 INAVTFFPNGWAFATGS---DDATCRLFDIRADQE---LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM-K 301 (340)
Q Consensus 229 v~~v~~~~~~~~l~s~s---~d~~i~iwd~~~~~~---~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~-~ 301 (340)
+....+ ++|..+++.. .++.|.+||+.+... .....+. ....+..++|+ ++.++++...|+..++|... +
T Consensus 274 ~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~ 350 (695)
T 2bkl_A 274 KYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPED-SSASLLSVSIV-GGHLSLEYLKDATSEVRVATLK 350 (695)
T ss_dssp CEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCC-SSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETT
T ss_pred eEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCC-CCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCC
Confidence 666666 6666444443 258899999876542 2222222 12246778888 77889999999998888643 3
Q ss_pred ceeeeeeccC-CcceEEEEECCCCCEEE----EeeCCCcEEecC
Q psy15421 302 TERAGILAGH-DNRVSCLGVTEDGMAVA----TGSWDSFLRIWN 340 (340)
Q Consensus 302 ~~~~~~~~~h-~~~i~~~~~s~d~~~l~----s~s~D~~i~iW~ 340 (340)
++....+..+ .+.|..++++||+..|+ +...+++|++||
T Consensus 351 g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d 394 (695)
T 2bkl_A 351 GKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTS 394 (695)
T ss_dssp CCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEE
T ss_pred CCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEE
Confidence 4445555554 67788899999998766 333457788875
No 192
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.70 E-value=5.7e-14 Score=118.83 Aligned_cols=216 Identities=12% Similarity=0.082 Sum_probs=161.4
Q ss_pred CCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCC-CcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCC
Q psy15421 65 SDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRS-SWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHT 143 (340)
Q Consensus 65 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~ 143 (340)
..++.|++++.|+.|++||..+++.+..++.+. ..+.++.++|+|++++ +.++.|..|+. +++ ....... ...
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~--~~W~~~~-~~~ 76 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGR--ELWNIAA-PAG 76 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSC--EEEEEEC-CTT
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCC--EEEEEcC-CCC
Confidence 456789999999999999999999999988766 4678899999999998 34677888886 433 2222222 122
Q ss_pred cceEEEEEcCCC-eEEEEeC-CCeEEEEECCCCceEEEEec------CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy15421 144 GYLSCCRFLDDN-QIVTSSG-DMSCALWDIETGQQCASFIG------HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD 215 (340)
Q Consensus 144 ~~v~~~~~~~~~-~l~~~~~-d~~v~iwd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~ 215 (340)
..+..+.+.+++ .+++.+. ++.+..+|. .++.+..+.. +......+++.++++++++...++.|..||.+
T Consensus 77 ~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~- 154 (276)
T 3no2_A 77 CEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN- 154 (276)
T ss_dssp CEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-
T ss_pred ccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-
Confidence 356666666665 5666666 677777776 5676665542 11234556788999999999999999999987
Q ss_pred CeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCC----cccceEEEEEcCCCcEEEEEe
Q psy15421 216 GSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDN----IICGITSVAFSRSGRLLLAGY 289 (340)
Q Consensus 216 ~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~----~~~~i~~~~~s~~~~~l~~g~ 289 (340)
|+.+..+... ..+.++.+.++|..+++++.++.|..+|..+++.+..+.... ....+..+...++|.++++.+
T Consensus 155 G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 155 GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 9888887654 345577888999999999988899999999888888875322 112367888899999998875
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.70 E-value=6.5e-13 Score=123.18 Aligned_cols=280 Identities=16% Similarity=0.114 Sum_probs=186.7
Q ss_pred cEEEEEEcCCCCeEEEEeCCCeEEEEeCC--CCCeeEEeeCCCCcEEEEEEC----CCCCEEEEEeC-CCeEEEEEccCC
Q psy15421 57 KIYAMHWGSDSRNLVSASQDGKLIVWDSY--TTNKVHAIPLRSSWVMTCAYA----PSGSFVACGGL-DNICSIYSLKTR 129 (340)
Q Consensus 57 ~v~~~~~s~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~~~~~~i~~v~~~----~~~~~l~~~~~-d~~v~i~~~~~~ 129 (340)
.+..+.|+||++++++++.|+.|.+||+. +.+.+..++... ....++|+ |+|++++++.. ++.+.++|..+.
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~ 276 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL 276 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCC
Confidence 56789999999999999999999999995 777777777644 35688999 69999887765 489999997664
Q ss_pred CCceEEEE-ee--cC---CCc-ceEEEEEcCCC--eEEEEeCCCeEEEEECCCCceEEE-EecCCCCeEEEEEcCCCCEE
Q psy15421 130 EGNVRVSR-EL--PG---HTG-YLSCCRFLDDN--QIVTSSGDMSCALWDIETGQQCAS-FIGHTGDVMSLSLAPDMRTF 199 (340)
Q Consensus 130 ~~~~~~~~-~~--~~---~~~-~v~~~~~~~~~--~l~~~~~d~~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~ 199 (340)
+....+.. .. .+ |.. .+..+..++++ .++....++.|.++|....+.... ..........+.|+|+++++
T Consensus 277 ~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~ 356 (567)
T 1qks_A 277 EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYF 356 (567)
T ss_dssp CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEE
T ss_pred cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEE
Confidence 32111110 00 00 112 45555555443 344556679999999876543221 12233456788999999988
Q ss_pred EEEe-CCCcEEEEECCCCeeeeEecC-----CCCCeEEEEEecC-CCEEEEEe-CCCcEEEEeCcC-------CcEEEEe
Q psy15421 200 VSGA-CDASAKLWDIRDGSCKQTFPG-----HESDINAVTFFPN-GWAFATGS-DDATCRLFDIRA-------DQELAMY 264 (340)
Q Consensus 200 ~sg~-~dg~i~~wd~~~~~~~~~~~~-----h~~~v~~v~~~~~-~~~l~s~s-~d~~i~iwd~~~-------~~~~~~~ 264 (340)
+++. .++.|.++|+.+++.+..+.- |.+....+ ++|+ +..++++. .++.|.++|... .+.+..+
T Consensus 357 ~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i 435 (567)
T 1qks_A 357 ITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSF 435 (567)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEE
T ss_pred EEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEE
Confidence 7655 689999999999987765543 43322222 5787 55555553 568999999886 4455544
Q ss_pred ecCCcccceEEEEEcCCCcEEEEEeC-------CCcEEEEeCCCc-----eee-eeec--------cCCcceEEEEECCC
Q psy15421 265 SHDNIICGITSVAFSRSGRLLLAGYD-------DFNCNVWDSMKT-----ERA-GILA--------GHDNRVSCLGVTED 323 (340)
Q Consensus 265 ~~~~~~~~i~~~~~s~~~~~l~~g~~-------d~~i~iw~~~~~-----~~~-~~~~--------~h~~~i~~~~~s~d 323 (340)
.... .+-..+..+|++++|.+... ...|.++|..+. ... ..+. .-...+..+.|+|+
T Consensus 436 ~~~g--~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (567)
T 1qks_A 436 PALG--GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKD 513 (567)
T ss_dssp ECSC--SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTT
T ss_pred ecCC--CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCC
Confidence 3322 12234678999999988663 358999998766 211 2221 12357888999999
Q ss_pred CCEEEEee-----CCCcEEecC
Q psy15421 324 GMAVATGS-----WDSFLRIWN 340 (340)
Q Consensus 324 ~~~l~s~s-----~D~~i~iW~ 340 (340)
|.++..+- .++.|.|.|
T Consensus 514 G~~~~~s~~~~~~~~~~i~v~D 535 (567)
T 1qks_A 514 GTEVWFSVWNGKDQESALVVVD 535 (567)
T ss_dssp SSEEEEEEECCTTSCCEEEEEE
T ss_pred CCEEEEEeecCCCCCCcEEEEE
Confidence 98766543 267777764
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.68 E-value=1e-12 Score=111.95 Aligned_cols=236 Identities=9% Similarity=0.043 Sum_probs=167.0
Q ss_pred CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEE-eCCCeEEEEECCC
Q psy15421 95 LRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTS-SGDMSCALWDIET 173 (340)
Q Consensus 95 ~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~-~~d~~v~iwd~~~ 173 (340)
.+...+.++++.++|+++++...++.+.+|+.. + ... ....+.+...+..+.+.+++.+..+ ..++.|..||..
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~--~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~- 86 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-G--KIT-EYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK- 86 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-C--CEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-C--CeE-EecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-
Confidence 334568899999999988877768889999875 2 221 1222334456677777666655444 457889999986
Q ss_pred CceEEEEe--cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeee-EecCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy15421 174 GQQCASFI--GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ-TFPGHESDINAVTFFPNGWAFATGSDDATC 250 (340)
Q Consensus 174 ~~~~~~~~--~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i 250 (340)
++. ..+. .....+..+++.|++.++++...++.|..||. +++... ....+...+..++++++|..+++...++.|
T Consensus 87 g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 87 GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence 332 2222 24456889999999988888778899999998 554432 233345578999999999888887778899
Q ss_pred EEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeee-eccCCcceEEEEECCCCCEEEE
Q psy15421 251 RLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI-LAGHDNRVSCLGVTEDGMAVAT 329 (340)
Q Consensus 251 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~-~~~h~~~i~~~~~s~d~~~l~s 329 (340)
..||. +++... +........+..++++++++++++...++.|..|+. +++.... +..+...+.+++++++|..+++
T Consensus 165 ~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~ 241 (299)
T 2z2n_A 165 GRITE-SGDITE-FKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFT 241 (299)
T ss_dssp EEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEE
T ss_pred EEEcC-CCcEEE-eeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEe
Confidence 99998 444332 222222335789999999998887777889999997 5553322 3345577899999999997777
Q ss_pred eeCCCcEEecC
Q psy15421 330 GSWDSFLRIWN 340 (340)
Q Consensus 330 ~s~D~~i~iW~ 340 (340)
...++.|.+||
T Consensus 242 ~~~~~~i~~~d 252 (299)
T 2z2n_A 242 EWGANKIGRLT 252 (299)
T ss_dssp ETTTTEEEEEE
T ss_pred ccCCceEEEEC
Confidence 66677887764
No 195
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.67 E-value=1.2e-13 Score=116.91 Aligned_cols=213 Identities=14% Similarity=0.034 Sum_probs=163.2
Q ss_pred CCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCC-cceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCC-C
Q psy15421 108 SGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHT-GYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHT-G 185 (340)
Q Consensus 108 ~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-~ 185 (340)
.++++++++.++.|.+||..+++. ...++.+. ..+..+.+.+++.++. +.++.|..||. +++.+..+..+. .
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~----~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~ 77 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEI----VWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIAAPAGC 77 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEE----EEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEEEECCTTC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeE----EEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCc
Confidence 468889999999999999766542 23333333 3455666777776655 56888999999 788888887653 4
Q ss_pred CeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCeeeeEec------CCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCC
Q psy15421 186 DVMSLSLAPDMRTFVSGAC-DASAKLWDIRDGSCKQTFP------GHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 258 (340)
Q Consensus 186 ~v~~~~~~~~~~~~~sg~~-dg~i~~wd~~~~~~~~~~~------~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 258 (340)
.+.++.+.|+++.+++.+. ++.|..+|. +++.+..+. .+......+++.++|.++++...++.|..||.. +
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G 155 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-G 155 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-C
Confidence 6888999999999999887 788888885 677655543 122245567789999999999999999999998 8
Q ss_pred cEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCC------cceEEEEECCCCCEEEEee
Q psy15421 259 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHD------NRVSCLGVTEDGMAVATGS 331 (340)
Q Consensus 259 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~------~~i~~~~~s~d~~~l~s~s 331 (340)
+.+..+.... .+.++.+.++|++++++..++.|..+|..+++.+-.+..+. ..+..++..++|..+++.+
T Consensus 156 ~~~w~~~~~~---~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 156 QLLNSVKLSG---TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp CEEEEEECSS---CCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CEEEEEECCC---CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 8887776542 35567889999999999999999999988888877665432 3478899999999888874
No 196
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.66 E-value=2.4e-13 Score=116.87 Aligned_cols=238 Identities=12% Similarity=0.100 Sum_probs=160.3
Q ss_pred CcEEEEEECCCCCEEEE-------EeCCCeEEEEEccCCCCceEEEEe--ecCCCcceEEEEEcCC-CeEEEEeCCCeEE
Q psy15421 98 SWVMTCAYAPSGSFVAC-------GGLDNICSIYSLKTREGNVRVSRE--LPGHTGYLSCCRFLDD-NQIVTSSGDMSCA 167 (340)
Q Consensus 98 ~~i~~v~~~~~~~~l~~-------~~~d~~v~i~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~-~~l~~~~~d~~v~ 167 (340)
.....++|++++.++++ +..++.|.+|+..++. ...... ..++...+..+.+.++ +.+..+.....|.
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~--~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~ 95 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGK--KTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLL 95 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCC--EEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCc--EEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEE
Confidence 34578899999988887 6778889999875543 211111 0123455677778777 7766666666899
Q ss_pred EEECCCCceEEE-Eec----CCCCeEEEEEcCCCCEEEEEeCC---------------CcEEEEECCCCeeeeEecCCCC
Q psy15421 168 LWDIETGQQCAS-FIG----HTGDVMSLSLAPDMRTFVSGACD---------------ASAKLWDIRDGSCKQTFPGHES 227 (340)
Q Consensus 168 iwd~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~~~sg~~d---------------g~i~~wd~~~~~~~~~~~~h~~ 227 (340)
+||.. ++.... ... ....+.++++.|+++++++...+ +.|..||.. ++..... .+..
T Consensus 96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~ 172 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQ 172 (314)
T ss_dssp EEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEES
T ss_pred EEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCC
Confidence 99998 654322 111 11347899999999888876655 567777765 5443322 2334
Q ss_pred CeEEEEEe----cCCCEE-EEEeCCCcEEEEeCc-CCcEE--EEee-cCCcc-cceEEEEEcCCCcEEEEEeCCCcEEEE
Q psy15421 228 DINAVTFF----PNGWAF-ATGSDDATCRLFDIR-ADQEL--AMYS-HDNII-CGITSVAFSRSGRLLLAGYDDFNCNVW 297 (340)
Q Consensus 228 ~v~~v~~~----~~~~~l-~s~s~d~~i~iwd~~-~~~~~--~~~~-~~~~~-~~i~~~~~s~~~~~l~~g~~d~~i~iw 297 (340)
..+.++++ |+++.+ ++...++.|.+||.. .++.. ..+. ..... ..+..++++++|+++++...++.|.+|
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~ 252 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVF 252 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEE
Confidence 56889999 998654 555668899999976 33211 1111 11111 246789999999999988888899999
Q ss_pred eCCCceeeeeeccCCcceEEEEECCCCCE-EEEeeCCCcEEecC
Q psy15421 298 DSMKTERAGILAGHDNRVSCLGVTEDGMA-VATGSWDSFLRIWN 340 (340)
Q Consensus 298 ~~~~~~~~~~~~~h~~~i~~~~~s~d~~~-l~s~s~D~~i~iW~ 340 (340)
+..+++....+..+...+.+++|+|+|.. +++...++.|..|+
T Consensus 253 d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~ 296 (314)
T 1pjx_A 253 GPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFE 296 (314)
T ss_dssp CTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred cCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEe
Confidence 97767666666667788999999999994 45555567776653
No 197
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.66 E-value=1.1e-12 Score=121.60 Aligned_cols=269 Identities=11% Similarity=0.033 Sum_probs=183.1
Q ss_pred CCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCc
Q psy15421 65 SDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTG 144 (340)
Q Consensus 65 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~ 144 (340)
+.+..+++...+++|.++|..+++.+..+.... .+..+.|+|||+++++++.++.|.+||+...... ....++....
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~--~v~~i~~G~~ 241 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT--TVAEIKIGSE 241 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC--EEEEEECCSE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-CccceEECCCCCEEEEEcCCCeEEEEECCCCCCc--EeEEEecCCC
Confidence 445567788889999999999999888887543 4678999999999999999999999998521212 2233433222
Q ss_pred ceEEEEEc----CCC-eEEE-EeCCCeEEEEECCCCceEEEEec----------CCC-CeEEEEEcCCCCEE-EEEeCCC
Q psy15421 145 YLSCCRFL----DDN-QIVT-SSGDMSCALWDIETGQQCASFIG----------HTG-DVMSLSLAPDMRTF-VSGACDA 206 (340)
Q Consensus 145 ~v~~~~~~----~~~-~l~~-~~~d~~v~iwd~~~~~~~~~~~~----------~~~-~v~~~~~~~~~~~~-~sg~~dg 206 (340)
-..+.++ +++ .++. ...++++.++|..+.+.+..+.. |.. .+..+..++++..+ ++...+|
T Consensus 242 -P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g 320 (567)
T 1qks_A 242 -ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG 320 (567)
T ss_dssp -EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred -CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence 3456677 355 4444 44579999999999888776542 112 57788888876654 4556679
Q ss_pred cEEEEECCCCeee--eEecCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEeCcCCcEEEEeec-CCcc---cceEEEEEc
Q psy15421 207 SAKLWDIRDGSCK--QTFPGHESDINAVTFFPNGWAFATGS-DDATCRLFDIRADQELAMYSH-DNII---CGITSVAFS 279 (340)
Q Consensus 207 ~i~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~~~~~~~~~~-~~~~---~~i~~~~~s 279 (340)
+|.++|....+.. ..+. .......+.|+|++++|+++. .++.|.++|..+.+.+..... .... .++. .++
T Consensus 321 ~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~--~~~ 397 (567)
T 1qks_A 321 KILLVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN--FVH 397 (567)
T ss_dssp EEEEEETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE--EEE
T ss_pred eEEEEecCCCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee--eEC
Confidence 9999998765422 2222 334567889999999887655 578999999998877665543 2211 1222 268
Q ss_pred CC-CcEEEEEe-CCCcEEEEeCCC-------ceeeeeeccCCcceEEEEECCCCCEEEEeeC-------CCcEEecC
Q psy15421 280 RS-GRLLLAGY-DDFNCNVWDSMK-------TERAGILAGHDNRVSCLGVTEDGMAVATGSW-------DSFLRIWN 340 (340)
Q Consensus 280 ~~-~~~l~~g~-~d~~i~iw~~~~-------~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~-------D~~i~iW~ 340 (340)
|+ +..++++. .+++|.+++..+ ++.+..+......-..+..+|++++|..... ..+|.|+|
T Consensus 398 p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d 474 (567)
T 1qks_A 398 PTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFD 474 (567)
T ss_dssp TTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEE
T ss_pred CCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEE
Confidence 87 44445543 568999999876 5566666544333244678999998876552 24666653
No 198
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.63 E-value=1.2e-13 Score=133.09 Aligned_cols=246 Identities=11% Similarity=0.036 Sum_probs=161.4
Q ss_pred ccCcEEEEEEcCCCCeEEEEeCC-----CeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCe--------
Q psy15421 54 HLAKIYAMHWGSDSRNLVSASQD-----GKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNI-------- 120 (340)
Q Consensus 54 h~~~v~~~~~s~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~-------- 120 (340)
|...+..++|||||++|+.++.+ ..|++||+.+++.+... .+...+..++|+|| +.|+.+..++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 43467889999999999877654 46999999998865431 11111246789999 98888876654
Q ss_pred ------EEEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCC-----CeEEEEECCCCc-e-EEEEecCCCC
Q psy15421 121 ------CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGD-----MSCALWDIETGQ-Q-CASFIGHTGD 186 (340)
Q Consensus 121 ------v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d-----~~v~iwd~~~~~-~-~~~~~~~~~~ 186 (340)
|.+|++.++...-........+...+....|++++ .++..+.+ ..|.+||+.++. . ...+..+...
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 318 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA 318 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc
Confidence 77888765432222333333444456777888876 45555433 479999998762 2 4555555555
Q ss_pred eEEEEEcCCCCEEEEEeC----CCcEEEEECCCC--eeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCc-CCc
Q psy15421 187 VMSLSLAPDMRTFVSGAC----DASAKLWDIRDG--SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR-ADQ 259 (340)
Q Consensus 187 v~~~~~~~~~~~~~sg~~----dg~i~~wd~~~~--~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~-~~~ 259 (340)
..... .|+++.++..+. ++.|.+||+.++ .....++.+...+..++++ ++..+++...|+..++|.+. .++
T Consensus 319 ~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~ 396 (741)
T 1yr2_A 319 QWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGK 396 (741)
T ss_dssp CEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSC
T ss_pred eEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCC
Confidence 54443 488888777665 355999999874 3444455555567778887 56788888999988887654 344
Q ss_pred EEEEeecCCcccceEEEEEcCCCcEEEEE----eCCCcEEEEeCCCcee
Q psy15421 260 ELAMYSHDNIICGITSVAFSRSGRLLLAG----YDDFNCNVWDSMKTER 304 (340)
Q Consensus 260 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~g----~~d~~i~iw~~~~~~~ 304 (340)
....+.... ...+..+.++|+++.|+.. ...++++.||..+++.
T Consensus 397 ~~~~l~~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 397 PAGAVSLPG-IGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp EEEECBCSS-SCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred ceeeccCCC-CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 443332211 2347788999998866633 2347899999877653
No 199
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.63 E-value=1.1e-13 Score=120.25 Aligned_cols=176 Identities=13% Similarity=0.038 Sum_probs=130.6
Q ss_pred CeEEEEECCCCceEEEEe-cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe-eeeEe---------cCCCCCeEEE
Q psy15421 164 MSCALWDIETGQQCASFI-GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS-CKQTF---------PGHESDINAV 232 (340)
Q Consensus 164 ~~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~-~~~~~---------~~h~~~v~~v 232 (340)
+.|.+||..+++....+. .+...+..++++|+++++++...++.|+.||..... .+..+ .++......+
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~i 148 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDV 148 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEE
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEE
Confidence 479999999888765554 344578999999999999998899999999975432 34444 2344568999
Q ss_pred EEec-CCCEEEEEe-CCCcEEEEeCcCCcEEEEeecC--------CcccceEEEEEcCC-CcEEEEEeCCCcEEEEeCCC
Q psy15421 233 TFFP-NGWAFATGS-DDATCRLFDIRADQELAMYSHD--------NIICGITSVAFSRS-GRLLLAGYDDFNCNVWDSMK 301 (340)
Q Consensus 233 ~~~~-~~~~l~s~s-~d~~i~iwd~~~~~~~~~~~~~--------~~~~~i~~~~~s~~-~~~l~~g~~d~~i~iw~~~~ 301 (340)
+++| ++..+++.+ .++.|++||. .++.+..+... .....+..++++|+ +.++++...++.|++|+..+
T Consensus 149 a~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~ 227 (329)
T 3fvz_A 149 AVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT 227 (329)
T ss_dssp EECTTTCCEEEEECSSCCEEEEECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred EEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC
Confidence 9999 788888887 6999999994 45555544321 12234789999998 88888888999999999877
Q ss_pred ceeeeee--ccCCcceEEEEECC------CCCEEEEeeCCCcEEecC
Q psy15421 302 TERAGIL--AGHDNRVSCLGVTE------DGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 302 ~~~~~~~--~~h~~~i~~~~~s~------d~~~l~s~s~D~~i~iW~ 340 (340)
++.+..+ ..+...+..++|+| +|..+++.+.+..|++||
T Consensus 228 G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~ 274 (329)
T 3fvz_A 228 KEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMN 274 (329)
T ss_dssp CCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEE
T ss_pred CcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEE
Confidence 8777766 35667889999999 443333334445777774
No 200
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.62 E-value=2.9e-12 Score=114.54 Aligned_cols=239 Identities=10% Similarity=0.030 Sum_probs=163.7
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCC--eEEEEEccCCCCce
Q psy15421 56 AKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDN--ICSIYSLKTREGNV 133 (340)
Q Consensus 56 ~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~--~v~i~~~~~~~~~~ 133 (340)
.....++|+++++++++...++.|++||..++........... .. ++|++++..|+.+..++ .+.+++...... .
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~-~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA-P 207 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC-E
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCce-e
Confidence 4678999999999888888889999999987665544443222 33 88999999998888765 677777654322 1
Q ss_pred EEEEeecC-CCcceEEEEEcC-CCeEEEEeCCCeEEEEECCCCceEEE----EecCCCCe-E-EEEEcCC-CCEEEEEeC
Q psy15421 134 RVSRELPG-HTGYLSCCRFLD-DNQIVTSSGDMSCALWDIETGQQCAS----FIGHTGDV-M-SLSLAPD-MRTFVSGAC 204 (340)
Q Consensus 134 ~~~~~~~~-~~~~v~~~~~~~-~~~l~~~~~d~~v~iwd~~~~~~~~~----~~~~~~~v-~-~~~~~~~-~~~~~sg~~ 204 (340)
.....+.. .......+.+.+ ++.|..+..++.|..||+.++..... ..+..... . .++|+|+ +.++++-..
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 11111112 334445566766 67777777788999999987653222 11222222 3 9999995 666667777
Q ss_pred CCcEEEEECCCCeeeeEecCCC---------------CCeEEEEEecCCCEEEEEe-CCCcEEEEeCcCCcEEEEeecC-
Q psy15421 205 DASAKLWDIRDGSCKQTFPGHE---------------SDINAVTFFPNGWAFATGS-DDATCRLFDIRADQELAMYSHD- 267 (340)
Q Consensus 205 dg~i~~wd~~~~~~~~~~~~h~---------------~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~~~~~~~~~~~- 267 (340)
++.|+.|+.... ...+.++. .....++++|+|..+++-+ .++.|+.||...+.........
T Consensus 288 ~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~ 365 (409)
T 3hrp_A 288 LSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVD 365 (409)
T ss_dssp TTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTT
T ss_pred CCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCC
Confidence 899999997643 22332221 3478999999999888888 8999999997666543333221
Q ss_pred -----------CcccceEEEEEcCCCcEEEEEeCCCcEEEEeC
Q psy15421 268 -----------NIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 299 (340)
Q Consensus 268 -----------~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~ 299 (340)
........++++|++.++++-..++.|+.+.+
T Consensus 366 ~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 366 VASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 01234789999999999988888888887764
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.62 E-value=1.6e-12 Score=111.73 Aligned_cols=242 Identities=8% Similarity=0.053 Sum_probs=159.3
Q ss_pred cCccCcEEEEEEcCCCCeEEE-------EeCCCeEEEEeCCCCCeeEEee----CCCCcEEEEEECCC-CCEEEEEeCCC
Q psy15421 52 RGHLAKIYAMHWGSDSRNLVS-------ASQDGKLIVWDSYTTNKVHAIP----LRSSWVMTCAYAPS-GSFVACGGLDN 119 (340)
Q Consensus 52 ~~h~~~v~~~~~s~~~~~l~s-------~~~d~~i~iwd~~~~~~~~~~~----~~~~~i~~v~~~~~-~~~l~~~~~d~ 119 (340)
.+......+++|++++.++++ +..++.|.+||..+++...... .+...+..++++++ ++++++. ..+
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~ 92 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRL 92 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-TTT
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-CCC
Confidence 444456689999999988887 5778999999987776532221 13356889999999 7655544 344
Q ss_pred eEEEEEccCCCCceEEE-Eee-cC-CCcceEEEEEcCCCeEEEEe-CC---------------CeEEEEECCCCceEEEE
Q psy15421 120 ICSIYSLKTREGNVRVS-REL-PG-HTGYLSCCRFLDDNQIVTSS-GD---------------MSCALWDIETGQQCASF 180 (340)
Q Consensus 120 ~v~i~~~~~~~~~~~~~-~~~-~~-~~~~v~~~~~~~~~~l~~~~-~d---------------~~v~iwd~~~~~~~~~~ 180 (340)
.+.+|+.. +. .... ... .. ....+..+.+.+++.+..+. .+ +.|..++.. ++. ..+
T Consensus 93 ~l~~~d~~-g~--~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~ 167 (314)
T 1pjx_A 93 GLLVVQTD-GT--FEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM-IQV 167 (314)
T ss_dssp EEEEEETT-SC--EEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE-EEE
T ss_pred CEEEEeCC-CC--EEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE-EEe
Confidence 67888875 32 2111 111 11 12346677777666554444 33 467777765 443 333
Q ss_pred ecCCCCeEEEEEc----CCCCEEE-EEeCCCcEEEEECC-CCe-----eeeEecCCC-CCeEEEEEecCCCEEEEEeCCC
Q psy15421 181 IGHTGDVMSLSLA----PDMRTFV-SGACDASAKLWDIR-DGS-----CKQTFPGHE-SDINAVTFFPNGWAFATGSDDA 248 (340)
Q Consensus 181 ~~~~~~v~~~~~~----~~~~~~~-sg~~dg~i~~wd~~-~~~-----~~~~~~~h~-~~v~~v~~~~~~~~l~s~s~d~ 248 (340)
..+......++++ |+++.++ +...++.|.+||.+ +++ ....+.++. ..+..++++++|..+++...++
T Consensus 168 ~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~ 247 (314)
T 1pjx_A 168 DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSS 247 (314)
T ss_dssp EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTT
T ss_pred ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCC
Confidence 3344457889999 9986554 55578999999976 443 223344444 5678899999999998888889
Q ss_pred cEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEE-EEeCCCcEEEEeCCC
Q psy15421 249 TCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLL-AGYDDFNCNVWDSMK 301 (340)
Q Consensus 249 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~g~~d~~i~iw~~~~ 301 (340)
.|..||..+++.+..+.... ..+.+++|+|+++.|. +...++.|..|+...
T Consensus 248 ~i~~~d~~~g~~~~~~~~~~--~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 248 HIEVFGPDGGQPKMRIRCPF--EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEEECTTCBSCSEEEECSS--SCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEEEcCCCCcEeEEEeCCC--CCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 99999987555444333221 3478999999999555 445567899998653
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.61 E-value=1.8e-11 Score=104.14 Aligned_cols=236 Identities=9% Similarity=0.005 Sum_probs=165.7
Q ss_pred CCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEE-eCCCeEEEEECCCC
Q psy15421 96 RSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTS-SGDMSCALWDIETG 174 (340)
Q Consensus 96 ~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~-~~d~~v~iwd~~~~ 174 (340)
....+..+++.++++++++...++.|.+|+.. + ... ...++.....+..+.+.+++.+..+ ..++.|..+|.. +
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~--~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-G--RIK-EFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S--CEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-C--ceE-EEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence 34567889999999988877778899999865 2 222 1223333355666777666655444 447889999988 5
Q ss_pred ceEEE-EecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeee-EecCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy15421 175 QQCAS-FIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ-TFPGHESDINAVTFFPNGWAFATGSDDATCRL 252 (340)
Q Consensus 175 ~~~~~-~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~i 252 (340)
+.... .......+..+++.++++++++...++.|..+|.. ++... .+......+.++++.++++.+++...++.|..
T Consensus 93 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~ 171 (300)
T 2qc5_A 93 GFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGR 171 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEE
T ss_pred CeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEE
Confidence 54221 12234568899999999988887778999999987 55432 23334567899999999997777777889999
Q ss_pred EeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeee-eeccCCcceEEEEECCCCCEEEEee
Q psy15421 253 FDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG-ILAGHDNRVSCLGVTEDGMAVATGS 331 (340)
Q Consensus 253 wd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~-~~~~h~~~i~~~~~s~d~~~l~s~s 331 (340)
+|. .++... +........+..++++++|.++++...++.|..|+. +++... .+..+...+.+++++++|..+++..
T Consensus 172 ~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 248 (300)
T 2qc5_A 172 ITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEW 248 (300)
T ss_dssp ECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred ECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEecc
Confidence 998 443332 322222235789999999988887777788999997 444332 2334556789999999999777776
Q ss_pred CCCcEEecC
Q psy15421 332 WDSFLRIWN 340 (340)
Q Consensus 332 ~D~~i~iW~ 340 (340)
.++.|..+|
T Consensus 249 ~~~~i~~~~ 257 (300)
T 2qc5_A 249 GANQIGRIT 257 (300)
T ss_dssp TTTEEEEEC
T ss_pred CCCeEEEEC
Confidence 678887764
No 203
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.61 E-value=1.9e-11 Score=107.77 Aligned_cols=266 Identities=14% Similarity=0.045 Sum_probs=171.1
Q ss_pred cCCCCeEEEEeC--CC---eEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEe----------CCCeEEEEEccC
Q psy15421 64 GSDSRNLVSASQ--DG---KLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGG----------LDNICSIYSLKT 128 (340)
Q Consensus 64 s~~~~~l~s~~~--d~---~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~----------~d~~v~i~~~~~ 128 (340)
.|+++++..... .. +|.++|..+++.+..++....+ .++++||+++++.+. .++.+.+||..+
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 356666555543 22 8899999999888777765443 889999999998886 367899999865
Q ss_pred CCCceEEEEeec--CC---CcceEEEEEcCCC-eEEEEeC--CCeEEEEECCCCceEEE-EecCCCCeEEEEEcCCC-CE
Q psy15421 129 REGNVRVSRELP--GH---TGYLSCCRFLDDN-QIVTSSG--DMSCALWDIETGQQCAS-FIGHTGDVMSLSLAPDM-RT 198 (340)
Q Consensus 129 ~~~~~~~~~~~~--~~---~~~v~~~~~~~~~-~l~~~~~--d~~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~ 198 (340)
.+....+ .+. .+ ...-..+.+++++ .++.+.. +.+|.++| .+++.+.. +. ... ++.+.|++ +.
T Consensus 107 ~~~~~~i--~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~-~~~---~~~~~~~~~~~ 179 (373)
T 2mad_H 107 FLPIADI--ELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS-SPT---CYHIHPGAPST 179 (373)
T ss_pred CcEEEEE--ECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC-CCc---eEEEEeCCCce
Confidence 4311111 111 00 0112245677665 4555543 57899999 99887766 43 222 24455655 45
Q ss_pred EEEEeCCCcEEEEECCCCeeeeEec-----CCCCCe-EEEEEecCCCEEEEEeCCCcEEEEeCcCCcE--EEEeecCC--
Q psy15421 199 FVSGACDASAKLWDIRDGSCKQTFP-----GHESDI-NAVTFFPNGWAFATGSDDATCRLFDIRADQE--LAMYSHDN-- 268 (340)
Q Consensus 199 ~~sg~~dg~i~~wd~~~~~~~~~~~-----~h~~~v-~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~--~~~~~~~~-- 268 (340)
+++.+.||.+.++|. +++...... ....++ ....+.+++..++..+.++.+.+.|+..... +..+....
T Consensus 180 ~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~ 258 (373)
T 2mad_H 180 FYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGG 258 (373)
T ss_pred EEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCc
Confidence 667788999999999 776553221 111221 2345666655544444678999999865422 12221100
Q ss_pred ------cccceEEEEEcCCCcEEEEEeC----------CCcEEEEeCCCceeeeeeccCCcceEEEEECCCCC-EEEEee
Q psy15421 269 ------IICGITSVAFSRSGRLLLAGYD----------DFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM-AVATGS 331 (340)
Q Consensus 269 ------~~~~i~~~~~s~~~~~l~~g~~----------d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~-~l~s~s 331 (340)
...+...++++|+++.+.++.. .+.|.++|..+.+.+..+. -......++|+|||+ +++++.
T Consensus 259 ~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~ 337 (373)
T 2mad_H 259 RKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALS 337 (373)
T ss_pred ccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCCCcCeEEECCCCCeEEEEEc
Confidence 0122344789999988877654 3579999999998888774 334678999999999 777777
Q ss_pred -CCCcEEecC
Q psy15421 332 -WDSFLRIWN 340 (340)
Q Consensus 332 -~D~~i~iW~ 340 (340)
.++.|.|+|
T Consensus 338 ~~~~~V~ViD 347 (373)
T 2mad_H 338 AGTEVLHIYD 347 (373)
T ss_pred CCCCeEEEEE
Confidence 489999886
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.61 E-value=2.2e-13 Score=131.23 Aligned_cols=267 Identities=13% Similarity=0.019 Sum_probs=165.2
Q ss_pred CCCCeEEEEeCCCe---EEEEe--CC---CCCeeEEe------eCCCCcEEEEEECCCCCEEEEEeCC-----CeEEEEE
Q psy15421 65 SDSRNLVSASQDGK---LIVWD--SY---TTNKVHAI------PLRSSWVMTCAYAPSGSFVACGGLD-----NICSIYS 125 (340)
Q Consensus 65 ~~~~~l~s~~~d~~---i~iwd--~~---~~~~~~~~------~~~~~~i~~v~~~~~~~~l~~~~~d-----~~v~i~~ 125 (340)
|+|++++-...++. -.+|- .. .++....+ ..+...+..++|||||++|+.+..+ ..|++||
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 67777665554433 44553 33 23322211 1222357788999999999887654 4699999
Q ss_pred ccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCC--------------eEEEEECCCCce--EEEEec--CCCCe
Q psy15421 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDM--------------SCALWDIETGQQ--CASFIG--HTGDV 187 (340)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~--------------~v~iwd~~~~~~--~~~~~~--~~~~v 187 (340)
+.+++.. .... +...+..+.|+++..|+.+..+. .|.+|++.+++. ...+.. +...+
T Consensus 196 l~tg~~~---~~~~--~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~ 270 (741)
T 1yr2_A 196 VADGKPL---ADEL--KWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRG 270 (741)
T ss_dssp TTTCCEE---EEEE--EEEESCCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCE
T ss_pred CCCCCCC---CccC--CCceeccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEE
Confidence 9775421 1111 11112345677665566666544 388999987652 222222 33358
Q ss_pred EEEEEcCCCCEEEEEeCC-----CcEEEEECCCC--eeeeEecCCCCCeEEEEEecCCCEEEEEeCC----CcEEEEeCc
Q psy15421 188 MSLSLAPDMRTFVSGACD-----ASAKLWDIRDG--SCKQTFPGHESDINAVTFFPNGWAFATGSDD----ATCRLFDIR 256 (340)
Q Consensus 188 ~~~~~~~~~~~~~sg~~d-----g~i~~wd~~~~--~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d----~~i~iwd~~ 256 (340)
..+.|+||+++++..+.+ ..|.+||+.++ .+...+..+...+... ++|+|..|+..+.+ +.|.+||+.
T Consensus 271 ~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~ 349 (741)
T 1yr2_A 271 HGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLS 349 (741)
T ss_dssp EEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECS
T ss_pred EEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 899999999988876654 38999999876 3134454455455444 35888888877764 459999987
Q ss_pred CC--cEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCC-Cceeeeeecc-CCcceEEEEECCCCCEEE----
Q psy15421 257 AD--QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM-KTERAGILAG-HDNRVSCLGVTEDGMAVA---- 328 (340)
Q Consensus 257 ~~--~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~-~~~~~~~~~~-h~~~i~~~~~s~d~~~l~---- 328 (340)
+. .....+.+. ...+..+.++ ++.++++...|+..++|... ++.....+.. +.+.|..++++||+..|+
T Consensus 350 ~~~~~~~~l~~~~--~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~s 426 (741)
T 1yr2_A 350 GSTPRFDTVVPES--KDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFS 426 (741)
T ss_dssp SSSCEEEEEECCC--SSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEE
T ss_pred CCccccEEEecCC--CCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEc
Confidence 64 222223222 1236677777 67788889999988877543 3444555544 467789999999987665
Q ss_pred EeeCCCcEEecC
Q psy15421 329 TGSWDSFLRIWN 340 (340)
Q Consensus 329 s~s~D~~i~iW~ 340 (340)
+....++|++||
T Consensus 427 s~~~P~~i~~~d 438 (741)
T 1yr2_A 427 SFTQPATVLALD 438 (741)
T ss_dssp ETTEEEEEEEEE
T ss_pred CCCCCCEEEEEE
Confidence 333346777775
No 205
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.58 E-value=1.1e-13 Score=121.66 Aligned_cols=172 Identities=11% Similarity=0.029 Sum_probs=129.2
Q ss_pred ceEEEEEcCC-CeEEEEeCCCeEEEEECCCCc----------eEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q psy15421 145 YLSCCRFLDD-NQIVTSSGDMSCALWDIETGQ----------QCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDI 213 (340)
Q Consensus 145 ~v~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~----------~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~ 213 (340)
.++.+.+++. +.+++|+.+ .+.+|+++... .......+.. |..++| +++.++++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 3555666554 566666666 56669865432 1112334666 999999 88899888 8899999999
Q ss_pred CCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCc
Q psy15421 214 RDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFN 293 (340)
Q Consensus 214 ~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~ 293 (340)
++.......+.|..++.++.+.+. .+++++.||.+.+||+...+... ....|++++|||+| ++.|..||+
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~------~~~~Vs~v~WSpkG--~~vg~~dg~ 183 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ------LAQNVTSFDVTNSQ--LAVLLKDRS 183 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE------EEESEEEEEECSSE--EEEEETTSC
T ss_pred hhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc------ccCCceEEEEcCCc--eEEEEcCCc
Confidence 876655566677888888776654 49999999999999998766543 22369999999999 688999999
Q ss_pred EEEEeCCCcee--eeee------c---cCCcceEEEEECCCCCEEEEee
Q psy15421 294 CNVWDSMKTER--AGIL------A---GHDNRVSCLGVTEDGMAVATGS 331 (340)
Q Consensus 294 i~iw~~~~~~~--~~~~------~---~h~~~i~~~~~s~d~~~l~s~s 331 (340)
+++|+....+. ..++ . +|...|.++.|.+++.++++-+
T Consensus 184 i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 184 FQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred EEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 99998776664 4444 2 4788999999999999988743
No 206
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.58 E-value=6.9e-11 Score=104.23 Aligned_cols=246 Identities=11% Similarity=0.038 Sum_probs=162.6
Q ss_pred EEecCccCcEEEEEEcCCCCeEEEEe----------CCCeEEEEeCCCCCeeEEeeCC-------CCcEEEEEECCCCCE
Q psy15421 49 RTLRGHLAKIYAMHWGSDSRNLVSAS----------QDGKLIVWDSYTTNKVHAIPLR-------SSWVMTCAYAPSGSF 111 (340)
Q Consensus 49 ~~~~~h~~~v~~~~~s~~~~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~-------~~~i~~v~~~~~~~~ 111 (340)
.++..-..+ .++++||++++..+. .++.|.+||..+.+.+..+... ......++++|||++
T Consensus 61 ~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~ 138 (373)
T 2mad_H 61 GHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNAD 138 (373)
T ss_pred EEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCE
Confidence 344433334 899999999988775 3678999999988877766543 123457899999999
Q ss_pred EEEEeC--CCeEEEEEccCCCCceEEEEe-ecCCCcceEEEEEcC-CCeEEEEeCCCeEEEEECCCCceEEEEe-----c
Q psy15421 112 VACGGL--DNICSIYSLKTREGNVRVSRE-LPGHTGYLSCCRFLD-DNQIVTSSGDMSCALWDIETGQQCASFI-----G 182 (340)
Q Consensus 112 l~~~~~--d~~v~i~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~~-----~ 182 (340)
|+.+.. ++.|.++| .+++ .... ++. ...+. .+.. ...+++.+.|+.+.++|. +++...... .
T Consensus 139 l~v~n~~~~~~v~viD-~t~~----~~~~~i~~-~~~~~--~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~ 209 (373)
T 2mad_H 139 LLFFQFAAGPAVGLVV-QGGS----SDDQLLSS-PTCYH--IHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLT 209 (373)
T ss_pred EEEEecCCCCeEEEEE-CCCC----EEeEEcCC-CceEE--EEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEecccccc
Confidence 998874 47899999 7653 2222 221 11111 1222 235677788999999999 777653321 1
Q ss_pred CCCC-eEEEEEcCCCCEEEEEeCCCcEEEEECCCCe--eeeEecCC----------CCCeEEEEEecCCCEEEEEeC---
Q psy15421 183 HTGD-VMSLSLAPDMRTFVSGACDASAKLWDIRDGS--CKQTFPGH----------ESDINAVTFFPNGWAFATGSD--- 246 (340)
Q Consensus 183 ~~~~-v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~--~~~~~~~h----------~~~v~~v~~~~~~~~l~s~s~--- 246 (340)
...+ .....+.+++..++..+.++.+.+.|+..+. ....+.-. ......+.++|++..+.....
T Consensus 210 ~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~ 289 (373)
T 2mad_H 210 AAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQS 289 (373)
T ss_pred CCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCC
Confidence 1111 1234556665554444478899999987553 22222110 122334788999887766543
Q ss_pred -------CCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCc-EEEEEe-CCCcEEEEeCCCceeeeee
Q psy15421 247 -------DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGR-LLLAGY-DDFNCNVWDSMKTERAGIL 308 (340)
Q Consensus 247 -------d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~g~-~d~~i~iw~~~~~~~~~~~ 308 (340)
++.|.++|..+.+.+..+.... ....++|+|||+ +++++. .++.|.++|..+++.+..+
T Consensus 290 ~~~~~~~~~~V~VID~~t~~vv~~i~~g~---~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 290 AWKLHAAAKEVTSVTGLVGQTSSQISLGH---DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred cccccCCCCeEEEEECCCCEEEEEEECCC---CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 3579999999888877664332 367899999999 677766 5899999999998887763
No 207
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.56 E-value=2.3e-11 Score=103.92 Aligned_cols=232 Identities=14% Similarity=0.119 Sum_probs=152.2
Q ss_pred ecCccCcEEEEEEcCCC-CeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCC
Q psy15421 51 LRGHLAKIYAMHWGSDS-RNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTR 129 (340)
Q Consensus 51 ~~~h~~~v~~~~~s~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~ 129 (340)
+..+..--.+..|++++ .++++...++.|+.||..+++.. .+. ....+..++++++++++++. ++.+.+|+..++
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g 83 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT-MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQ 83 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEE-CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTT
T ss_pred eccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEe-CCCceEEEEECCCCCEEEEE--CCeEEEEECCCC
Confidence 44444455688899864 56667777899999998876642 232 24568899999999966543 567888887653
Q ss_pred CCceEEEEeecC--CCcceEEEEEcCCCeEEEEeC----------CCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCC
Q psy15421 130 EGNVRVSRELPG--HTGYLSCCRFLDDNQIVTSSG----------DMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMR 197 (340)
Q Consensus 130 ~~~~~~~~~~~~--~~~~v~~~~~~~~~~l~~~~~----------d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 197 (340)
. ......... .......+.+.+++.+..+.. ...-.+|.+........+.........++|+|+++
T Consensus 84 ~--~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~ 161 (297)
T 3g4e_A 84 S--AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHK 161 (297)
T ss_dssp E--EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSC
T ss_pred c--EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCC
Confidence 2 222222211 123456677777766555432 12345555543222333333445578999999998
Q ss_pred EE-EEEeCCCcEEEEEC--CCCee-----eeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCc
Q psy15421 198 TF-VSGACDASAKLWDI--RDGSC-----KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNI 269 (340)
Q Consensus 198 ~~-~sg~~dg~i~~wd~--~~~~~-----~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~ 269 (340)
.+ ++.+.++.|..||+ .++.. ...+..+...+..++++++|..+++....+.|..||..+++.+..+....
T Consensus 162 ~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~- 240 (297)
T 3g4e_A 162 IFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV- 240 (297)
T ss_dssp EEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSS-
T ss_pred EEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCC-
Confidence 65 45666899999987 45542 22233334567899999999988888888899999998777766654332
Q ss_pred ccceEEEEEc-CCCcEEEEEeC
Q psy15421 270 ICGITSVAFS-RSGRLLLAGYD 290 (340)
Q Consensus 270 ~~~i~~~~~s-~~~~~l~~g~~ 290 (340)
..+++++|. |+++.|.+.+.
T Consensus 241 -~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 241 -DKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp -SBEEEEEEESGGGCEEEEEEB
T ss_pred -CCceEEEEeCCCCCEEEEEcC
Confidence 248899998 88887766554
No 208
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.55 E-value=2.9e-13 Score=118.86 Aligned_cols=173 Identities=14% Similarity=0.078 Sum_probs=132.9
Q ss_pred cEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCC-----------eeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Q psy15421 57 KIYAMHWGSDSRNLVSASQDGKLIVWDSYTTN-----------KVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYS 125 (340)
Q Consensus 57 ~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~-----------~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~ 125 (340)
.+..+++++...++++|+.++ +++|++.+.. .....+ +.. |..++| ++++|+++ .++.+++|+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKE-IPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEE-CTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEee-CCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 689999999999999999985 5569754222 112333 445 999999 99999998 889999999
Q ss_pred ccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCC
Q psy15421 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACD 205 (340)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~d 205 (340)
+...... ...+.|...+..+.+...+ ++++..||.+.+||+..++... +...|.|++|+|+| ++.|..|
T Consensus 113 v~sl~~~----~~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 113 LEELSEF----RTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp SSSTTCE----EEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETT
T ss_pred chhhhcc----CccceeecceeeEEecCCC-EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcC
Confidence 9765421 1234455667777765443 8888999999999999776543 34579999999999 6789999
Q ss_pred CcEEEEECCCCee--eeEe------c---CCCCCeEEEEEecCCCEEEEEeC
Q psy15421 206 ASAKLWDIRDGSC--KQTF------P---GHESDINAVTFFPNGWAFATGSD 246 (340)
Q Consensus 206 g~i~~wd~~~~~~--~~~~------~---~h~~~v~~v~~~~~~~~l~s~s~ 246 (340)
|++++|+...+.+ .+++ . +|...|.+|.|.+++.++++-..
T Consensus 182 g~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~~ 233 (388)
T 1xip_A 182 RSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGN 233 (388)
T ss_dssp SCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEEC
T ss_pred CcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEcC
Confidence 9999999887775 5555 2 37788999999999988887544
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.53 E-value=6.9e-11 Score=100.98 Aligned_cols=226 Identities=10% Similarity=0.030 Sum_probs=149.2
Q ss_pred CcEEEEEECCCC-CEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCce
Q psy15421 98 SWVMTCAYAPSG-SFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQ 176 (340)
Q Consensus 98 ~~i~~v~~~~~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~ 176 (340)
...-...|+|++ .++++...++.|..|+..++. .. ... ....+.++.+.+++.++.+. +..|.+||..+++.
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~--~~-~~~---~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQ--VQ-RVT---MDAPVSSVALRQSGGYVATI-GTKFCALNWKEQSA 85 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCC--EE-EEE---CSSCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEE
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCc--EE-EEe---CCCceEEEEECCCCCEEEEE-CCeEEEEECCCCcE
Confidence 344567788854 455666677899999986543 11 111 23457777887777766665 67899999987764
Q ss_pred EEEEecC----CCCeEEEEEcCCCCEEEEEeCC---------CcEEEEECCC-CeeeeEecCCCCCeEEEEEecCCCEE-
Q psy15421 177 CASFIGH----TGDVMSLSLAPDMRTFVSGACD---------ASAKLWDIRD-GSCKQTFPGHESDINAVTFFPNGWAF- 241 (340)
Q Consensus 177 ~~~~~~~----~~~v~~~~~~~~~~~~~sg~~d---------g~i~~wd~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l- 241 (340)
....... ...+..++++|+++++++...+ ..-.+|.+.. ++... +..+....+.++|+|+++.+
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~ly 164 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIFY 164 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEEE
T ss_pred EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEEE
Confidence 3222211 2247889999999977754322 3345555442 33322 22233456899999999865
Q ss_pred EEEeCCCcEEEEeCc--CCcEE--EEee-cCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceE
Q psy15421 242 ATGSDDATCRLFDIR--ADQEL--AMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVS 316 (340)
Q Consensus 242 ~s~s~d~~i~iwd~~--~~~~~--~~~~-~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~ 316 (340)
++.+.++.|..||+. ++... ..+. .......+..++++++|++.++...++.|..|+..+++.+..+..+...++
T Consensus 165 v~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t 244 (297)
T 3g4e_A 165 YIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTT 244 (297)
T ss_dssp EEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEE
T ss_pred EecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCce
Confidence 556667899999873 33221 1111 111123467899999999888888888999999888888888877778899
Q ss_pred EEEEC-CCCCEEEEee
Q psy15421 317 CLGVT-EDGMAVATGS 331 (340)
Q Consensus 317 ~~~~s-~d~~~l~s~s 331 (340)
+++|+ ||+..|..++
T Consensus 245 ~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 245 SCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EEEEESGGGCEEEEEE
T ss_pred EEEEeCCCCCEEEEEc
Confidence 99998 8887654333
No 210
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.53 E-value=3.1e-11 Score=107.86 Aligned_cols=233 Identities=9% Similarity=0.093 Sum_probs=157.9
Q ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCC-eEEEEeCCC--eEEEEECCCCc
Q psy15421 99 WVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDM--SCALWDIETGQ 175 (340)
Q Consensus 99 ~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~--~v~iwd~~~~~ 175 (340)
....++++++++++++...++.|++|+...+. .. ...... .... +.+.+++ .++.+..++ .|..++...+.
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~--~~--~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNK--VT--TVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTE--EE--EEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCE--EE--EeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 46789999999988877778999999986432 11 111111 1122 5566654 566666655 78899987665
Q ss_pred eEEEE---ec-CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeE----ecCCCCCe--EEEEEec-CCCEEEEE
Q psy15421 176 QCASF---IG-HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT----FPGHESDI--NAVTFFP-NGWAFATG 244 (340)
Q Consensus 176 ~~~~~---~~-~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~----~~~h~~~v--~~v~~~~-~~~~l~s~ 244 (340)
....+ .. ....+.+++++|+...++.+..++.|..||...+..... ..++...- +.++|+| ++..+++-
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 43333 12 445678899999555555567789999999987653322 22222222 3899999 47777777
Q ss_pred eCCCcEEEEeCcCCcEEEEeecC------------CcccceEEEEEcCCCcEEEEEe-CCCcEEEEeCCCceeeeeeccC
Q psy15421 245 SDDATCRLFDIRADQELAMYSHD------------NIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMKTERAGILAGH 311 (340)
Q Consensus 245 s~d~~i~iwd~~~~~~~~~~~~~------------~~~~~i~~~~~s~~~~~l~~g~-~d~~i~iw~~~~~~~~~~~~~h 311 (340)
..++.|+.|+.... ........ ........++++|+|+++++-. .++.|+.|+..++.. ..+.++
T Consensus 286 ~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~ 363 (409)
T 3hrp_A 286 QNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQ 363 (409)
T ss_dssp TTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEEC
T ss_pred CCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCC
Confidence 78899999997643 22222221 0122478999999999888888 899999999766653 334444
Q ss_pred ---------------CcceEEEEECCCCCEEEEeeCCCcEEec
Q psy15421 312 ---------------DNRVSCLGVTEDGMAVATGSWDSFLRIW 339 (340)
Q Consensus 312 ---------------~~~i~~~~~s~d~~~l~s~s~D~~i~iW 339 (340)
......++++++|.++++-..+++|+.+
T Consensus 364 ~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i 406 (409)
T 3hrp_A 364 VDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKY 406 (409)
T ss_dssp TTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEE
T ss_pred CCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEE
Confidence 2457899999999999998888888764
No 211
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.52 E-value=3.4e-11 Score=105.37 Aligned_cols=252 Identities=15% Similarity=0.111 Sum_probs=165.0
Q ss_pred EEEEcCCCCeEEEEe----------CCCeEEEEeCCCCCeeEEeeCCC-------CcEEEEEECCCCCEEEEEeC--CCe
Q psy15421 60 AMHWGSDSRNLVSAS----------QDGKLIVWDSYTTNKVHAIPLRS-------SWVMTCAYAPSGSFVACGGL--DNI 120 (340)
Q Consensus 60 ~~~~s~~~~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~~-------~~i~~v~~~~~~~~l~~~~~--d~~ 120 (340)
.++++||++++..+. .+++|.+||..+.+.+..+.... .....++|+|||++++.+.. ++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 399999999887665 36789999999999887775422 13446789999999988864 689
Q ss_pred EEEEEccCCCCceEEEEeecCCCcceEEEEEcC-CCeEEEEeCCCeEEEEECCC-CceEEEEecCC----CCeE-EEEEc
Q psy15421 121 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQIVTSSGDMSCALWDIET-GQQCASFIGHT----GDVM-SLSLA 193 (340)
Q Consensus 121 v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~~~~~d~~v~iwd~~~-~~~~~~~~~~~----~~v~-~~~~~ 193 (340)
|.++|+.+.+ ...+++... . ...+.. ...+++.+.||.+.+.++.. ++.......+. .++. ...|.
T Consensus 162 VsVID~~t~~----vv~tI~v~g-~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~ 234 (386)
T 3sjl_D 162 VGVVDLEGKA----FKRMLDVPD-C--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYS 234 (386)
T ss_dssp EEEEETTTTE----EEEEEECCS-E--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEE
T ss_pred EEEEECCCCc----EEEEEECCC-c--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeE
Confidence 9999997753 233332111 1 112222 34677888999999999976 55432211111 1221 23553
Q ss_pred -CCCCEEEEEeCCCcEEEEECCCCee--eeEec---------C-CCCCeEEEEEecCCCEEEEEeC----------CCcE
Q psy15421 194 -PDMRTFVSGACDASAKLWDIRDGSC--KQTFP---------G-HESDINAVTFFPNGWAFATGSD----------DATC 250 (340)
Q Consensus 194 -~~~~~~~sg~~dg~i~~wd~~~~~~--~~~~~---------~-h~~~v~~v~~~~~~~~l~s~s~----------d~~i 250 (340)
+++++++ .+.+|+|.+.|+..+.. ...+. + ..+....++++|++..+..... ...|
T Consensus 235 ~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V 313 (386)
T 3sjl_D 235 QKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFV 313 (386)
T ss_dssp TTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEE
T ss_pred cCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEE
Confidence 6775554 45689999999976542 22221 0 0122334777898877666532 2579
Q ss_pred EEEeCcCCcEEEEeecCCcccceEEEEEcCCCc-EEEEE-eCCCcEEEEeCCCceeeeeeccCCcceEEEEECCC
Q psy15421 251 RLFDIRADQELAMYSHDNIICGITSVAFSRSGR-LLLAG-YDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTED 323 (340)
Q Consensus 251 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~g-~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d 323 (340)
.+.|..+.+.+..+... .++..++|+||++ +|++. ..++.|.++|..+++.+..+..- +.-+.+.+++|
T Consensus 314 ~viD~~t~kv~~~i~vg---~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 314 VVLDAKTGERLAKFEMG---HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp EEEETTTCCEEEEEEEE---EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC-CSSCCEEEECC
T ss_pred EEEECCCCeEEEEEECC---CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC-CCCceeEECCc
Confidence 99999999888766433 2477899999997 66664 45899999999999888776422 22334555665
No 212
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.51 E-value=5e-11 Score=104.31 Aligned_cols=268 Identities=16% Similarity=0.115 Sum_probs=174.0
Q ss_pred cCCCCeEEEEeC-----CCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEe----------CCCeEEEEEccC
Q psy15421 64 GSDSRNLVSASQ-----DGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGG----------LDNICSIYSLKT 128 (340)
Q Consensus 64 s~~~~~l~s~~~-----d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~----------~d~~v~i~~~~~ 128 (340)
.|+++.+..... ++.|.+.|..+.+.+.+++....+ . ++++|||++++.+. .++.|.+||..+
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t 118 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT 118 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence 478877776654 679999999999998888865555 4 99999999887775 367899999877
Q ss_pred CCCceEEEEeecC-C----CcceEEEEEcCCCe-EEEEe-C-CCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEE
Q psy15421 129 REGNVRVSRELPG-H----TGYLSCCRFLDDNQ-IVTSS-G-DMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFV 200 (340)
Q Consensus 129 ~~~~~~~~~~~~~-~----~~~v~~~~~~~~~~-l~~~~-~-d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 200 (340)
.+....+ .++. . ...-..+.++++++ +..+. . ++.|.++|+.+++.+.++.... + ...+....+.++
T Consensus 119 ~~v~~~I--~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~ 193 (386)
T 3sjl_D 119 LLPTADI--ELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFF 193 (386)
T ss_dssp CCEEEEE--EETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEE
T ss_pred CeEEEEE--ECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeE
Confidence 5421111 1221 0 01122355666654 44444 2 6899999999999887774321 1 223333455777
Q ss_pred EEeCCCcEEEEECCC-CeeeeEecCC----CCCe-EEEEEe-cCCCEEEEEeCCCcEEEEeCcCCcE--EEEee---c--
Q psy15421 201 SGACDASAKLWDIRD-GSCKQTFPGH----ESDI-NAVTFF-PNGWAFATGSDDATCRLFDIRADQE--LAMYS---H-- 266 (340)
Q Consensus 201 sg~~dg~i~~wd~~~-~~~~~~~~~h----~~~v-~~v~~~-~~~~~l~s~s~d~~i~iwd~~~~~~--~~~~~---~-- 266 (340)
+.+.||++.+.++.. ++.......+ ..++ ....|. ++|+.+. .+.+|.+++.|+.+... ...+. .
T Consensus 194 ~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~ 272 (386)
T 3sjl_D 194 MHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAE 272 (386)
T ss_dssp EEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHH
T ss_pred EECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceecccccc
Confidence 888899999999876 5542211111 1222 123554 6775544 55589999999975532 11111 0
Q ss_pred --CC-cccceEEEEEcCCCcEEEEEeC----------CCcEEEEeCCCceeeeeeccCCcceEEEEECCCCC-EEEE-ee
Q psy15421 267 --DN-IICGITSVAFSRSGRLLLAGYD----------DFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM-AVAT-GS 331 (340)
Q Consensus 267 --~~-~~~~i~~~~~s~~~~~l~~g~~----------d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~-~l~s-~s 331 (340)
.. ...+...++++|+++.+..... ..+|.+.|..+.+.+..+.- ...++.+++++|++ +|++ ..
T Consensus 273 ~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~ 351 (386)
T 3sjl_D 273 RADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALST 351 (386)
T ss_dssp HHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEEET
T ss_pred ccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEEcC
Confidence 00 1123445788999998887653 25799999999988877642 24788999999996 6655 44
Q ss_pred CCCcEEecC
Q psy15421 332 WDSFLRIWN 340 (340)
Q Consensus 332 ~D~~i~iW~ 340 (340)
.++.|.++|
T Consensus 352 ~~~~VsViD 360 (386)
T 3sjl_D 352 GDKTLYIHD 360 (386)
T ss_dssp TTTEEEEEE
T ss_pred CCCeEEEEE
Confidence 588888875
No 213
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.49 E-value=6.8e-12 Score=119.87 Aligned_cols=244 Identities=9% Similarity=0.047 Sum_probs=157.0
Q ss_pred CccCcEEEEEEcCCCCeEEE-----EeCCCeEEEEeCCCCCeeEE-eeCCCCcEEEEEECCCCCEEEEEeCCCe------
Q psy15421 53 GHLAKIYAMHWGSDSRNLVS-----ASQDGKLIVWDSYTTNKVHA-IPLRSSWVMTCAYAPSGSFVACGGLDNI------ 120 (340)
Q Consensus 53 ~h~~~v~~~~~s~~~~~l~s-----~~~d~~i~iwd~~~~~~~~~-~~~~~~~i~~v~~~~~~~~l~~~~~d~~------ 120 (340)
+|...+..++||||+++|+- |+.+.+|++||+.+++.+.. +.. .....++|+ |++.|+.+..+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCccccccc
Confidence 45567889999999998883 33346799999999886532 211 112456899 9999988887743
Q ss_pred -------EEEEEccCCCCceEEEEeecC-CCcceEEEEEcCCCe-EE-EEe---CCCeEEEEECCCCc-eEEEEecCCCC
Q psy15421 121 -------CSIYSLKTREGNVRVSRELPG-HTGYLSCCRFLDDNQ-IV-TSS---GDMSCALWDIETGQ-QCASFIGHTGD 186 (340)
Q Consensus 121 -------v~i~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~-l~-~~~---~d~~v~iwd~~~~~-~~~~~~~~~~~ 186 (340)
|.+|++.++...-........ |........++++++ ++ +.. .+..+.++|+.++. ....+..+...
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~ 282 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA 282 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc
Confidence 888888765433233333333 445556677887764 33 332 23589999997764 34556666655
Q ss_pred eEEEEEcCCCCEE-EEEeCC---CcEEEEECCCCee--eeEecCCCCCeEEEEEecCCCEEEEEeCCC---cEEEEeCcC
Q psy15421 187 VMSLSLAPDMRTF-VSGACD---ASAKLWDIRDGSC--KQTFPGHESDINAVTFFPNGWAFATGSDDA---TCRLFDIRA 257 (340)
Q Consensus 187 v~~~~~~~~~~~~-~sg~~d---g~i~~wd~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~---~i~iwd~~~ 257 (340)
.... +++++..+ +....+ +.|..+|+.++.. ...+..|...+. .|++++.+|+....++ .|++||+..
T Consensus 283 ~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 283 DVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 5554 55555544 444443 6899999987654 245555665554 8899888877665544 688998875
Q ss_pred CcEEEEeecCCcccceEEEEEcCCCcEEEEEeCC----CcEEEEeCCCcee
Q psy15421 258 DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD----FNCNVWDSMKTER 304 (340)
Q Consensus 258 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d----~~i~iw~~~~~~~ 304 (340)
.. ...+.... ...+..+.++|+++.++....+ +++..||..+++.
T Consensus 360 ~~-~~~l~~p~-~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 360 KR-VREVALPG-LGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp CE-EEEECCSS-SSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred Ce-eEEeecCC-CceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 43 33332221 1235667778888877766555 7899999766643
No 214
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.48 E-value=5.8e-12 Score=110.00 Aligned_cols=260 Identities=10% Similarity=0.038 Sum_probs=163.8
Q ss_pred CcEEEEEEcCCCCeEEEEe--CCCeEEEEeCCCCCeeEEee-------CCCCcEEEEEECCCCCEEEEEeC-----CCeE
Q psy15421 56 AKIYAMHWGSDSRNLVSAS--QDGKLIVWDSYTTNKVHAIP-------LRSSWVMTCAYAPSGSFVACGGL-----DNIC 121 (340)
Q Consensus 56 ~~v~~~~~s~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~-------~~~~~i~~v~~~~~~~~l~~~~~-----d~~v 121 (340)
.....++++++++.+++.. .++.++||.+.+++ +..++ .+-..+..++++++++++++-.. +..|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 6789999999999988864 23435566554443 33221 23356899999999887665433 5788
Q ss_pred EEEEccCCCCceEEEEeec----CCCcceEEEEEcC-CCeE-EEEe---CCCeEEEEECCCCceEEEEecCCCCeE-EEE
Q psy15421 122 SIYSLKTREGNVRVSRELP----GHTGYLSCCRFLD-DNQI-VTSS---GDMSCALWDIETGQQCASFIGHTGDVM-SLS 191 (340)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~-~~~l-~~~~---~d~~v~iwd~~~~~~~~~~~~~~~~v~-~~~ 191 (340)
.+||+.++. ......++ .+......+.+.+ ++.+ ++-. .++.|.+||+.+++....+.+|..... ...
T Consensus 96 ~~~d~~tg~--~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~ 173 (343)
T 2qe8_A 96 VAWDTLNNQ--LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDID 173 (343)
T ss_dssp EEEETTTTE--EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCC
T ss_pred EEEECCCCe--EEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccc
Confidence 999987543 11111222 1223456667764 4554 4544 578999999998876555544322110 133
Q ss_pred EcCCCCEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCC-cEEEEeCc---CCc--------
Q psy15421 192 LAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA-TCRLFDIR---ADQ-------- 259 (340)
Q Consensus 192 ~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~-~i~iwd~~---~~~-------- 259 (340)
+.+++..+.+.+.+|.++.|. ..++.++|+|+++.|+.+..++ .+..++.. ...
T Consensus 174 ~~~~g~~~~~~~~~g~~~~~~--------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 239 (343)
T 2qe8_A 174 LVIDGVPVQIGQPDGTVIRPH--------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGS 239 (343)
T ss_dssp CEETTEECBEECTTSCEECCC--------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHT
T ss_pred eeECCEEEEeccCCCceecee--------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhc
Confidence 445666676777788776653 1367899999998888777666 44444422 100
Q ss_pred EEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeec-cCCcceEEEEECCCCCEEEEeeCCCc
Q psy15421 260 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA-GHDNRVSCLGVTEDGMAVATGSWDSF 335 (340)
Q Consensus 260 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~-~h~~~i~~~~~s~d~~~l~s~s~D~~ 335 (340)
.+....... ....++++++|.++++...++.|.+|+..+++...... .+.....+++|.++|.++++.+..+.
T Consensus 240 ~~~~~g~~g---~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~ 313 (343)
T 2qe8_A 240 KIERYSEKP---ICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHH 313 (343)
T ss_dssp TCEEEEECC---SCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGG
T ss_pred ceEecccCC---CCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcccc
Confidence 001111111 24568999999999999999999999974555433222 23456899999999998888775443
No 215
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.47 E-value=5.2e-11 Score=102.15 Aligned_cols=234 Identities=13% Similarity=0.124 Sum_probs=151.6
Q ss_pred EEecCccCcEEEEEEcCCCC-eEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEcc
Q psy15421 49 RTLRGHLAKIYAMHWGSDSR-NLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLK 127 (340)
Q Consensus 49 ~~~~~h~~~v~~~~~s~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~ 127 (340)
..+..+........|+++++ ++++...++.|..|+. +++ ...+..+...+..++++++|+++++...++.|.+|+..
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 34445556678899999998 6677778899999997 444 34444455678899999999977766666788888864
Q ss_pred CCCCceEEEE-eecCC-CcceEEEEEcCCCeEEE-----EeC-------------CCeEEEEECCCCceEEEEecCCCCe
Q psy15421 128 TREGNVRVSR-ELPGH-TGYLSCCRFLDDNQIVT-----SSG-------------DMSCALWDIETGQQCASFIGHTGDV 187 (340)
Q Consensus 128 ~~~~~~~~~~-~~~~~-~~~v~~~~~~~~~~l~~-----~~~-------------d~~v~iwd~~~~~~~~~~~~~~~~v 187 (340)
+...... ...+. ...+..+.+.+++.+.. +.. .+.|..+|..+++..... .....
T Consensus 116 ---g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p 190 (305)
T 3dr2_A 116 ---GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHP 190 (305)
T ss_dssp ---SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSE
T ss_pred ---CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCC
Confidence 2222211 11111 12234566666665544 221 246777777666543322 33457
Q ss_pred EEEEEcCCCCEEEEEeCC------CcEEEEECCCCee--eeEe-cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCC
Q psy15421 188 MSLSLAPDMRTFVSGACD------ASAKLWDIRDGSC--KQTF-PGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 258 (340)
Q Consensus 188 ~~~~~~~~~~~~~sg~~d------g~i~~wd~~~~~~--~~~~-~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 258 (340)
..++|+|+++.++.+... +.|..|++..+.. ...+ .........++++++|..+++. .+ .|.+|+.. +
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~~-g 267 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDSD-G 267 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEEEECTT-S
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEEEECCC-C
Confidence 889999999977766554 7899999875431 1111 1123345678999999855554 44 49999984 4
Q ss_pred cEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEE
Q psy15421 259 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN 295 (340)
Q Consensus 259 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~ 295 (340)
+.+..+.... .+.+++|+|+++.|..++.++..+
T Consensus 268 ~~~~~~~~~~---~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 268 QLLGHIPTPG---TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp CEEEEEECSS---CCCEEEECTTSCEEEEEETTEEEE
T ss_pred CEEEEEECCC---ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 4555444332 378899999999888888775433
No 216
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.46 E-value=5.1e-11 Score=106.04 Aligned_cols=267 Identities=17% Similarity=0.092 Sum_probs=173.5
Q ss_pred CCCCeEEEEeC-C----CeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEe----------CCCeEEEEEccCC
Q psy15421 65 SDSRNLVSASQ-D----GKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGG----------LDNICSIYSLKTR 129 (340)
Q Consensus 65 ~~~~~l~s~~~-d----~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~----------~d~~v~i~~~~~~ 129 (340)
++++.+..... + +.|.+.|..+.+.+..++....+ .++++||+++++.+. .++.|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 45555444433 3 79999999999999888876665 799999999888876 3678999998765
Q ss_pred CCceEEEEeecCC-----CcceEEEEEcCCC-eEEEEeC--CCeEEEEECCCCceEEEEecCCCCeEEEEEcCCC-CEEE
Q psy15421 130 EGNVRVSRELPGH-----TGYLSCCRFLDDN-QIVTSSG--DMSCALWDIETGQQCASFIGHTGDVMSLSLAPDM-RTFV 200 (340)
Q Consensus 130 ~~~~~~~~~~~~~-----~~~v~~~~~~~~~-~l~~~~~--d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~ 200 (340)
+.... ..+.+. ...-..+.+++++ +++.+.. ++.|.+.|+.+++.+..+..-. . ....|++ ..++
T Consensus 160 ~vv~~--I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g--~--~~~~p~g~~~~v 233 (426)
T 3c75_H 160 LPIAD--IELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD--C--YHIFPASPTVFY 233 (426)
T ss_dssp CEEEE--EEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E--EEEEEEETTEEE
T ss_pred cEEEE--EECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC--c--eeeccCCCcEEE
Confidence 42111 112200 0111234566665 4555443 6789999999998877765321 1 2334433 5667
Q ss_pred EEeCCCcEEEEECCCCeeeeE----ecCCCCCe-EEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEE--EeecC---C--
Q psy15421 201 SGACDASAKLWDIRDGSCKQT----FPGHESDI-NAVTFFPNGWAFATGSDDATCRLFDIRADQELA--MYSHD---N-- 268 (340)
Q Consensus 201 sg~~dg~i~~wd~~~~~~~~~----~~~h~~~v-~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~--~~~~~---~-- 268 (340)
+.+.||++.+.+..+++.... +.....++ ..+.+.+++..++..+..+.+.+.|........ .+... .
T Consensus 234 ~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~ 313 (426)
T 3c75_H 234 MNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERA 313 (426)
T ss_dssp EEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGG
T ss_pred EEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccc
Confidence 777888888888865554321 21111221 235678888877777788999999986543221 11100 0
Q ss_pred ---cccceEEEEEcCCCcEEEEEeC----------CCcEEEEeCCCceeeeeeccCCcceEEEEECCCCC-EEEEee-CC
Q psy15421 269 ---IICGITSVAFSRSGRLLLAGYD----------DFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM-AVATGS-WD 333 (340)
Q Consensus 269 ---~~~~i~~~~~s~~~~~l~~g~~----------d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~-~l~s~s-~D 333 (340)
...+...++++|+++.+.+... .+.|.++|..+.+.+..+.-- .....++|+|||+ ++++.- .+
T Consensus 314 ~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s 392 (426)
T 3c75_H 314 DDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGT 392 (426)
T ss_dssp GTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTT
T ss_pred cccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCC
Confidence 0112223689999887776543 347999999999988877532 3578899999999 888777 58
Q ss_pred CcEEecC
Q psy15421 334 SFLRIWN 340 (340)
Q Consensus 334 ~~i~iW~ 340 (340)
+.|.|+|
T Consensus 393 ~~VsVID 399 (426)
T 3c75_H 393 QTLHIYD 399 (426)
T ss_dssp TEEEEEE
T ss_pred CeEEEEE
Confidence 9998875
No 217
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.46 E-value=4.4e-10 Score=97.31 Aligned_cols=223 Identities=11% Similarity=-0.002 Sum_probs=144.3
Q ss_pred cEEEEEEcCCC-CeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEE
Q psy15421 57 KIYAMHWGSDS-RNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRV 135 (340)
Q Consensus 57 ~v~~~~~s~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~ 135 (340)
-..+..|+|++ ..+++...++.|..||..+++.. .+. ....+.+++++++++++++. . ..+.+|+..++. ...
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~--~~~ 123 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGV--LTL 123 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCC--EEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCc--EEE
Confidence 45678899975 45666667899999998776532 232 23568899999999987764 3 447888876543 222
Q ss_pred EEeecC--CCcceEEEEEcCCCeEEEEeC-------CCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEE-EEeCC
Q psy15421 136 SRELPG--HTGYLSCCRFLDDNQIVTSSG-------DMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFV-SGACD 205 (340)
Q Consensus 136 ~~~~~~--~~~~v~~~~~~~~~~l~~~~~-------d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-sg~~d 205 (340)
...... ....+..+.+.+++.+..++. .+.|..++ +++ ...+.........++|+|+++.++ +.+.+
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~-~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGK-VTKLFADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTE-EEEEEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCc-EEEeeCCCcccCCeEEcCCCCEEEEEECCC
Confidence 211111 123566777777766554442 23455555 443 333333334578999999998664 45567
Q ss_pred CcEEEEECC--CC-ee-----eeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEE
Q psy15421 206 ASAKLWDIR--DG-SC-----KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVA 277 (340)
Q Consensus 206 g~i~~wd~~--~~-~~-----~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~ 277 (340)
+.|.+||+. ++ .. ...+......+..++++++|.++++...++.|..||. +++.+..+.... ..+++++
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~--~~~~~~a 277 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPG--KQTTCPA 277 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSC--SBEEEEE
T ss_pred CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCC--CCcEEEE
Confidence 899999986 55 32 2233334455788999999988888777789999998 455544443322 2488999
Q ss_pred Ec-CCCcEEEEEeCC
Q psy15421 278 FS-RSGRLLLAGYDD 291 (340)
Q Consensus 278 ~s-~~~~~l~~g~~d 291 (340)
|+ |++..|.+++..
T Consensus 278 f~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 278 FIGPDASRLLVTSAR 292 (326)
T ss_dssp EESTTSCEEEEEEBC
T ss_pred EecCCCCEEEEEecC
Confidence 98 888877665543
No 218
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.45 E-value=6.2e-11 Score=105.48 Aligned_cols=240 Identities=12% Similarity=0.062 Sum_probs=162.1
Q ss_pred EEEEcCCCCeEEEEe----------CCCeEEEEeCCCCCeeEEeeCC-------CCcEEEEEECCCCCEEEEEeC--CCe
Q psy15421 60 AMHWGSDSRNLVSAS----------QDGKLIVWDSYTTNKVHAIPLR-------SSWVMTCAYAPSGSFVACGGL--DNI 120 (340)
Q Consensus 60 ~~~~s~~~~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~-------~~~i~~v~~~~~~~~l~~~~~--d~~ 120 (340)
.+.++||++++..+. .++.|.++|..+.+.+..+... ......+.++|||++++.+.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 899999999888775 4679999999999988777542 122346789999999998874 578
Q ss_pred EEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEE----ecCCCC-eEEEEEcCC
Q psy15421 121 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASF----IGHTGD-VMSLSLAPD 195 (340)
Q Consensus 121 v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~----~~~~~~-v~~~~~~~~ 195 (340)
|.+.|+.+.. +...++.-. . ..+.......+++.+.|+.+.+.+..+++..... .....+ ...+.+.++
T Consensus 202 VsVID~~t~k----vv~~I~v~g-~-~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~d 275 (426)
T 3c75_H 202 VGVVDLEGKT----FDRMLDVPD-C-YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLR 275 (426)
T ss_dssp EEEEETTTTE----EEEEEECCS-E-EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTT
T ss_pred EEEEECCCCe----EEEEEEcCC-c-eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCC
Confidence 9999987653 222332211 1 1111112345677788999888888666544221 111111 123567888
Q ss_pred CCEEEEEeCCCcEEEEECCCCeee--eEecC---C-------CCCeEEEEEecCCCEEEEEeC----------CCcEEEE
Q psy15421 196 MRTFVSGACDASAKLWDIRDGSCK--QTFPG---H-------ESDINAVTFFPNGWAFATGSD----------DATCRLF 253 (340)
Q Consensus 196 ~~~~~sg~~dg~i~~wd~~~~~~~--~~~~~---h-------~~~v~~v~~~~~~~~l~s~s~----------d~~i~iw 253 (340)
+..++.....+.|.+.|+..+... ..++- . ......++++|++.++..... ++.|.++
T Consensus 276 g~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVI 355 (426)
T 3c75_H 276 SGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVL 355 (426)
T ss_dssp TCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEE
T ss_pred CCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEE
Confidence 887776677899999998654321 11110 0 011123689999776655432 3579999
Q ss_pred eCcCCcEEEEeecCCcccceEEEEEcCCCc-EEEEEe-CCCcEEEEeCCCceeeeee
Q psy15421 254 DIRADQELAMYSHDNIICGITSVAFSRSGR-LLLAGY-DDFNCNVWDSMKTERAGIL 308 (340)
Q Consensus 254 d~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~g~-~d~~i~iw~~~~~~~~~~~ 308 (340)
|..+.+.+..+.... ....++|+||++ ++++.. .++.|.++|..+++.++.+
T Consensus 356 D~~T~kvv~~I~vg~---~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 356 NAETGERINKIELGH---EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp ETTTCCEEEEEEEEE---EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred ECCCCeEEEEEECCC---CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 999988887764332 367899999999 888877 5899999999999988776
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.45 E-value=2.1e-10 Score=98.35 Aligned_cols=233 Identities=13% Similarity=0.102 Sum_probs=153.2
Q ss_pred eEEeeCCCCcEEEEEECCCCC-EEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeC-CCeEE
Q psy15421 90 VHAIPLRSSWVMTCAYAPSGS-FVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSG-DMSCA 167 (340)
Q Consensus 90 ~~~~~~~~~~i~~v~~~~~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~-d~~v~ 167 (340)
+..+.....+....+|+|+++ ++++...++.+..|+.. + .... +..+...+..+.+.+++.++.+.. ++.|.
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g--~~~~---~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~ 110 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-G--TVDV---LLDATAFTNGNAVDAQQRLVHCEHGRRAIT 110 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-S--CEEE---EEESCSCEEEEEECTTSCEEEEETTTTEEE
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-C--CEEE---EeCCCCccceeeECCCCCEEEEECCCCEEE
Confidence 334444455667888999998 55666677888889762 2 2222 222345567778877777666654 57899
Q ss_pred EEECCCCceEEEEecC-----CCCeEEEEEcCCCCEEEE----EeC-------------CCcEEEEECCCCeeeeEecCC
Q psy15421 168 LWDIETGQQCASFIGH-----TGDVMSLSLAPDMRTFVS----GAC-------------DASAKLWDIRDGSCKQTFPGH 225 (340)
Q Consensus 168 iwd~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~s----g~~-------------dg~i~~wd~~~~~~~~~~~~h 225 (340)
.|+.. ++. ..+..+ ...+..+++.|++++++| |.. .+.|..||..+++..... .
T Consensus 111 ~~~~~-g~~-~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~ 186 (305)
T 3dr2_A 111 RSDAD-GQA-HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--D 186 (305)
T ss_dssp EECTT-SCE-EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--E
T ss_pred EECCC-CCE-EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--c
Confidence 99986 543 222211 124668999999998886 432 256777887666644332 3
Q ss_pred CCCeEEEEEecCCCEEEEEeCC------CcEEEEeCcCCcEEE---EeecCCcccceEEEEEcCCCcEEEEEeCCCcEEE
Q psy15421 226 ESDINAVTFFPNGWAFATGSDD------ATCRLFDIRADQELA---MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNV 296 (340)
Q Consensus 226 ~~~v~~v~~~~~~~~l~s~s~d------~~i~iwd~~~~~~~~---~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~i 296 (340)
....+.++|+|+++.++.+... +.|+.|++.... +. .+... ....+..++++++|++.++. .+ .|.+
T Consensus 187 ~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~-~~~~pdgi~~d~~G~lwv~~-~~-gv~~ 262 (305)
T 3dr2_A 187 LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASV-PDGLPDGFCVDRGGWLWSSS-GT-GVCV 262 (305)
T ss_dssp ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECC-SSSCCCSEEECTTSCEEECC-SS-EEEE
T ss_pred CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEEC-CCCCCCeEEECCCCCEEEec-CC-cEEE
Confidence 3457899999999977766655 789999987543 21 11111 11224568899999955544 44 4999
Q ss_pred EeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEe
Q psy15421 297 WDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 338 (340)
Q Consensus 297 w~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~i 338 (340)
|+. .++.+..+..+. .+.+++|+|+++.|..++.++..++
T Consensus 263 ~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 263 FDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp ECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred ECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 996 566666665544 5889999999988888887766554
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.44 E-value=2.6e-10 Score=98.71 Aligned_cols=220 Identities=12% Similarity=0.082 Sum_probs=143.2
Q ss_pred EEEEEECCCC-CEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEE
Q psy15421 100 VMTCAYAPSG-SFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCA 178 (340)
Q Consensus 100 i~~v~~~~~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~ 178 (340)
.....|+|++ .++++...++.|..|+..++. .. ... ....+.++.+.+++.++.++.+ .|.+||..+++..
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~--~~-~~~---~~~~v~~i~~~~dg~l~v~~~~-gl~~~d~~~g~~~- 122 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGR--KT-VHA---LPFMGSALAKISDSKQLIASDD-GLFLRDTATGVLT- 122 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTE--EE-EEE---CSSCEEEEEEEETTEEEEEETT-EEEEEETTTCCEE-
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCc--EE-EEE---CCCcceEEEEeCCCeEEEEECC-CEEEEECCCCcEE-
Confidence 3456788874 455666677889999876532 11 111 2345677777777776666644 4999999887643
Q ss_pred EEecC-----CCCeEEEEEcCCCCEEEEEeC------CCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEE-EEEeC
Q psy15421 179 SFIGH-----TGDVMSLSLAPDMRTFVSGAC------DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF-ATGSD 246 (340)
Q Consensus 179 ~~~~~-----~~~v~~~~~~~~~~~~~sg~~------dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~ 246 (340)
.+... ...+..++++|+++++++... .+.|..++ +++... +..+....+.++|+|+++.+ ++.+.
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~ 199 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTK 199 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETT
T ss_pred EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECC
Confidence 23221 124789999999997776542 24555555 455432 22233457899999999865 44456
Q ss_pred CCcEEEEeCc--CC-cE--EEEee-cCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEE
Q psy15421 247 DATCRLFDIR--AD-QE--LAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGV 320 (340)
Q Consensus 247 d~~i~iwd~~--~~-~~--~~~~~-~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~ 320 (340)
++.|.+||+. ++ .. ...+. .......+..++++++|.+.++...++.|..|+. +++.+..+..+...+++++|
T Consensus 200 ~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af 278 (326)
T 2ghs_A 200 VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAF 278 (326)
T ss_dssp TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEE
T ss_pred CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEE
Confidence 7899999975 33 21 01111 1111123678899999998888777788999996 66666666666778999999
Q ss_pred C-CCCCEEEEee
Q psy15421 321 T-EDGMAVATGS 331 (340)
Q Consensus 321 s-~d~~~l~s~s 331 (340)
+ +++..|+.++
T Consensus 279 ~g~d~~~L~vt~ 290 (326)
T 2ghs_A 279 IGPDASRLLVTS 290 (326)
T ss_dssp ESTTSCEEEEEE
T ss_pred ecCCCCEEEEEe
Confidence 8 8887664443
No 221
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.42 E-value=8.5e-11 Score=111.91 Aligned_cols=269 Identities=13% Similarity=0.082 Sum_probs=175.6
Q ss_pred CCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCc----------E-EEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEE
Q psy15421 67 SRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSW----------V-MTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRV 135 (340)
Q Consensus 67 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~----------i-~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~ 135 (340)
+..++.++.++.|+.+|..+++.+......... + ..+++ .+..++.++.|+.+..+|..+++.....
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 557777888999999999999988776543221 0 01111 3567788889999999998876543332
Q ss_pred EEeecCCC---cceEEEEEcCCCeEEEEe------CCCeEEEEECCCCceEEEEecCC----------------------
Q psy15421 136 SRELPGHT---GYLSCCRFLDDNQIVTSS------GDMSCALWDIETGQQCASFIGHT---------------------- 184 (340)
Q Consensus 136 ~~~~~~~~---~~v~~~~~~~~~~l~~~~------~d~~v~iwd~~~~~~~~~~~~~~---------------------- 184 (340)
....+. ..+.......++.++.+. .++.|..||..+|+.+..+....
T Consensus 148 --~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 225 (689)
T 1yiq_A 148 --DTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGD 225 (689)
T ss_dssp --ECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSS
T ss_pred --cCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCc
Confidence 221010 111110001245555543 26899999999999887764210
Q ss_pred ---------CCeEEEEEcCCCCEEEEEeCCCc-------------------EEEEECCCCeeeeEecC--CC-------C
Q psy15421 185 ---------GDVMSLSLAPDMRTFVSGACDAS-------------------AKLWDIRDGSCKQTFPG--HE-------S 227 (340)
Q Consensus 185 ---------~~v~~~~~~~~~~~~~sg~~dg~-------------------i~~wd~~~~~~~~~~~~--h~-------~ 227 (340)
..-..+++.|+..+++.+..++. |..+|.++|+.+-.++. |. .
T Consensus 226 ~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~ 305 (689)
T 1yiq_A 226 AYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQ 305 (689)
T ss_dssp THHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCS
T ss_pred eeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCC
Confidence 00125788898889998888764 99999999998766653 21 1
Q ss_pred CeEEEEEecCCC---EEEEEeCCCcEEEEeCcCCcEEEEeecCCc--cc-------------------------------
Q psy15421 228 DINAVTFFPNGW---AFATGSDDATCRLFDIRADQELAMYSHDNI--IC------------------------------- 271 (340)
Q Consensus 228 ~v~~v~~~~~~~---~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~--~~------------------------------- 271 (340)
+........+|+ .++.++.+|.++++|..+++.+........ ..
T Consensus 306 ~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~ 385 (689)
T 1yiq_A 306 HMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAF 385 (689)
T ss_dssp CEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCT
T ss_pred CcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCc
Confidence 222223333565 788999999999999999888743321110 00
Q ss_pred ----ceEEEEEcCCCcEEEEEeC---------------------------------------------CCcEEEEeCCCc
Q psy15421 272 ----GITSVAFSRSGRLLLAGYD---------------------------------------------DFNCNVWDSMKT 302 (340)
Q Consensus 272 ----~i~~~~~s~~~~~l~~g~~---------------------------------------------d~~i~iw~~~~~ 302 (340)
.-..++|+|+..++.++.. ++.+..||..++
T Consensus 386 ~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG 465 (689)
T 1yiq_A 386 WGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQ 465 (689)
T ss_dssp TCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTT
T ss_pred ccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCC
Confidence 0113688998888777532 377999999999
Q ss_pred eeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 303 ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 303 ~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
+.+-.+..+ .++..-.++..+.+++.|+.|+.++.||
T Consensus 466 ~~~W~~~~~-~~~~~g~~~tagglvf~gt~dg~l~a~D 502 (689)
T 1yiq_A 466 QAAWEVPYV-TIFNGGTLSTAGNLVFEGSADGRVIAYA 502 (689)
T ss_dssp EEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred CeEeEccCC-CCccCccceECCCEEEEECCCCcEEEEE
Confidence 876655444 3333345666778999999999999986
No 222
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.39 E-value=5.1e-11 Score=113.19 Aligned_cols=269 Identities=14% Similarity=0.127 Sum_probs=178.5
Q ss_pred CCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCc----------E-EEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEE
Q psy15421 67 SRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSW----------V-MTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRV 135 (340)
Q Consensus 67 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~----------i-~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~ 135 (340)
+..++.++.++.|..+|..+++.+......... + ..+++ ++..++.++.|+.+..+|..+++....
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~- 153 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWH- 153 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE-
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEee-
Confidence 456777788899999999999988776543210 0 11122 466788888999999999877653332
Q ss_pred EEeec-CC--CcceEEEEEcCCCeEEEEeC------CCeEEEEECCCCceEEEEecCCCC--------------------
Q psy15421 136 SRELP-GH--TGYLSCCRFLDDNQIVTSSG------DMSCALWDIETGQQCASFIGHTGD-------------------- 186 (340)
Q Consensus 136 ~~~~~-~~--~~~v~~~~~~~~~~l~~~~~------d~~v~iwd~~~~~~~~~~~~~~~~-------------------- 186 (340)
.... .. ...+.......++.++.++. ++.|..+|..+|+.+..+......
T Consensus 154 -~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~ 232 (677)
T 1kb0_A 154 -QNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPS 232 (677)
T ss_dssp -EETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGG
T ss_pred -ecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccccccc
Confidence 2221 00 01111111112455555543 689999999999988776542211
Q ss_pred ------------eEEEEEcCCCCEEEEEeCCC-------------------cEEEEECCCCeeeeEecC--CC-------
Q psy15421 187 ------------VMSLSLAPDMRTFVSGACDA-------------------SAKLWDIRDGSCKQTFPG--HE------- 226 (340)
Q Consensus 187 ------------v~~~~~~~~~~~~~sg~~dg-------------------~i~~wd~~~~~~~~~~~~--h~------- 226 (340)
...++++|++..++.+..++ .|..+|.++|+.+-.++. |.
T Consensus 233 g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~ 312 (677)
T 1kb0_A 233 GKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTST 312 (677)
T ss_dssp GCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCC
T ss_pred CceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccC
Confidence 13578889888888877664 599999999998766543 21
Q ss_pred CCeEEEEEecCC---CEEEEEeCCCcEEEEeCcCCcEEEEeecCCcc--------cc-e---------------------
Q psy15421 227 SDINAVTFFPNG---WAFATGSDDATCRLFDIRADQELAMYSHDNII--------CG-I--------------------- 273 (340)
Q Consensus 227 ~~v~~v~~~~~~---~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~--------~~-i--------------------- 273 (340)
....-+....+| ..++.++.+|.++++|..+++.+..+...... +. +
T Consensus 313 ~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~ 392 (677)
T 1kb0_A 313 QPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGA 392 (677)
T ss_dssp SCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCS
T ss_pred CCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccc
Confidence 122233444577 68999999999999999999887655321100 00 0
Q ss_pred ---EEEEEcCCCcEEEEEeCC-------------------------------------------CcEEEEeCCCceeeee
Q psy15421 274 ---TSVAFSRSGRLLLAGYDD-------------------------------------------FNCNVWDSMKTERAGI 307 (340)
Q Consensus 274 ---~~~~~s~~~~~l~~g~~d-------------------------------------------~~i~iw~~~~~~~~~~ 307 (340)
..++|+|+..++.++..+ +.|..||..+++.+-.
T Consensus 393 ~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~ 472 (677)
T 1kb0_A 393 HNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWS 472 (677)
T ss_dssp SCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEE
T ss_pred cCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEee
Confidence 156889998888776432 6799999998887655
Q ss_pred eccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 308 LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 308 ~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
+. +..++....++.++..++.++.|+.+++||
T Consensus 473 ~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D 504 (677)
T 1kb0_A 473 VE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYH 504 (677)
T ss_dssp EE-ESSSCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred cC-CCCCCcCcceEeCCCEEEEECCCCcEEEEE
Confidence 53 344555555677788888899999999886
No 223
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.34 E-value=1.8e-10 Score=100.87 Aligned_cols=257 Identities=13% Similarity=0.028 Sum_probs=161.7
Q ss_pred EEeEEecCccCcEEEEEEcCCCCeEEEEe----------CCCeEEEEeCCCCCeeEEeeCCC-------CcEEEEEECCC
Q psy15421 46 RTRRTLRGHLAKIYAMHWGSDSRNLVSAS----------QDGKLIVWDSYTTNKVHAIPLRS-------SWVMTCAYAPS 108 (340)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~~-------~~i~~v~~~~~ 108 (340)
+...++..-..+ .+.++||++++..+. .+++|.+||..+.+.+.+++... .....++++||
T Consensus 57 ~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpD 134 (368)
T 1mda_H 57 VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCAS 134 (368)
T ss_dssp EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTT
T ss_pred eEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCC
Confidence 444555433345 799999999988876 37899999999999998886541 22456789999
Q ss_pred CCEEEEEeC--CCeEEE--EEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCC-----CceEEE
Q psy15421 109 GSFVACGGL--DNICSI--YSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIET-----GQQCAS 179 (340)
Q Consensus 109 ~~~l~~~~~--d~~v~i--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~-----~~~~~~ 179 (340)
|++++++.. ++.+.+ +|..+ .... ..++. .. +.......+++.+.|+.+.+.|+.+ ++....
T Consensus 135 Gk~lyVan~~~~~~v~V~~iD~~t----v~~i-~v~~~-~~---~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~ 205 (368)
T 1mda_H 135 SACLLFFLFGSSAAAGLSVPGASD----DQLT-KSASC-FH---IHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQ 205 (368)
T ss_dssp SSCEEEEECSSSCEEEEEETTTEE----EEEE-ECSSC-CC---CEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCC
T ss_pred CCEEEEEccCCCCeEEEEEEchhh----ceEE-ECCCc-eE---EccCCCeEEEEEcCCCCEEEEECccccccCCeEEEE
Confidence 999998875 467888 88755 1111 11111 11 1111223456667788888888876 332210
Q ss_pred ----EecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe--eeeEecC-------CC---CCeEEEEEecCCCEEEE
Q psy15421 180 ----FIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS--CKQTFPG-------HE---SDINAVTFFPNGWAFAT 243 (340)
Q Consensus 180 ----~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~--~~~~~~~-------h~---~~v~~v~~~~~~~~l~s 243 (340)
+..-..+. . .+++..++..+. +.|.+.|+..+. .+..+.- +. .....++++|++.++..
T Consensus 206 ~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV 280 (368)
T 1mda_H 206 CTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMI 280 (368)
T ss_dssp SCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEE
T ss_pred eeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEE
Confidence 10111222 3 555555555555 999999986532 2222210 00 11112689999887775
Q ss_pred EeC---------CCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCc-EEEEEe-CCCcEEEEeCCCceeeeeeccCC
Q psy15421 244 GSD---------DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGR-LLLAGY-DDFNCNVWDSMKTERAGILAGHD 312 (340)
Q Consensus 244 ~s~---------d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~g~-~d~~i~iw~~~~~~~~~~~~~h~ 312 (340)
+.. +..+.++|..+.+.+..+.... ....++|+|||+ .+++.. .++.|.++|..+.+.+..+.-..
T Consensus 281 ~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~---~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~ 357 (368)
T 1mda_H 281 LTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH---DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK 357 (368)
T ss_dssp EEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE---EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS
T ss_pred EeccccCcccccCCCEEEEECCCCeEEEEEECCC---CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCC
Confidence 432 2356699999888776554322 477899999998 455565 58999999999999988876543
Q ss_pred cceEEEEECC
Q psy15421 313 NRVSCLGVTE 322 (340)
Q Consensus 313 ~~i~~~~~s~ 322 (340)
.+ ..+++.+
T Consensus 358 ~P-~~i~~~~ 366 (368)
T 1mda_H 358 GP-ESLSVQN 366 (368)
T ss_dssp CC-CEEECCC
T ss_pred CC-CEEEeec
Confidence 32 4455544
No 224
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.33 E-value=9.3e-13 Score=116.21 Aligned_cols=205 Identities=13% Similarity=0.077 Sum_probs=115.4
Q ss_pred CCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecC--CC
Q psy15421 66 DSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPG--HT 143 (340)
Q Consensus 66 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~--~~ 143 (340)
++..+++++.|+.|+.||..+++.+..+.. ..+.+..+..++..+++++.|+.+..||..+++.........+. ..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 577899999999999999999999887776 33444445567778888889999999998776544332211110 01
Q ss_pred cceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEec
Q psy15421 144 GYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP 223 (340)
Q Consensus 144 ~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~ 223 (340)
..+ ...++.+++++.++.+..||..+|+....+..+. ...++|++..+++++.|+.|..||.++++.+-.++
T Consensus 86 sp~----~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 86 SPC----RSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp CSC----C-----CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEE
T ss_pred Cce----EecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEe
Confidence 111 1134567778889999999999998877665443 23456788889999999999999999988655443
Q ss_pred CCCCCeEEEEEecCC---CEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcE
Q psy15421 224 GHESDINAVTFFPNG---WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRL 284 (340)
Q Consensus 224 ~h~~~v~~v~~~~~~---~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 284 (340)
.+. ....++.++. ..++.++.||.++.||..+++.+..+...... +....+++++..
T Consensus 158 ~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv--~~~~~~~~dg~~ 217 (369)
T 2hz6_A 158 YFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPV--VAFYVWQREGLR 217 (369)
T ss_dssp EEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCE--EEEEECTTSSCE
T ss_pred ccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCce--EEEEEecCCceE
Confidence 211 1122233321 45677889999999999988887766533211 223445566653
No 225
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.33 E-value=5.4e-09 Score=92.16 Aligned_cols=259 Identities=9% Similarity=0.029 Sum_probs=161.1
Q ss_pred CCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCC---------CcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEE
Q psy15421 66 DSRNLVSASQDGKLIVWDSYTTNKVHAIPLRS---------SWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVS 136 (340)
Q Consensus 66 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~---------~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~ 136 (340)
++..++.++.++.|..+|..+++.+....... ..+.. ....++..++.++.++.+..+|..+++.. ..
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~--W~ 128 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVA--WQ 128 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEE--EE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEE--EE
Confidence 35677888889999999999999876665432 22222 12224567777888999999998766432 33
Q ss_pred EeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCCCCe-----EEEEEcCCCCEEEEEeCCCcEEEE
Q psy15421 137 RELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDV-----MSLSLAPDMRTFVSGACDASAKLW 211 (340)
Q Consensus 137 ~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~~~sg~~dg~i~~w 211 (340)
........... . ..++.++.++.++.+..+|..+++....+....... ...... +..++.+..++.+..+
T Consensus 129 ~~~~~~~~~~p--~-~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~ 203 (376)
T 3q7m_A 129 TKVAGEALSRP--V-VSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAV 203 (376)
T ss_dssp EECSSCCCSCC--E-EETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEE
T ss_pred EeCCCceEcCC--E-EECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEE
Confidence 33322111111 1 135678888889999999999998877665422111 111222 4567788889999999
Q ss_pred ECCCCeeeeEecCCCCC-------eEEEEEec--CCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCC
Q psy15421 212 DIRDGSCKQTFPGHESD-------INAVTFFP--NGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSG 282 (340)
Q Consensus 212 d~~~~~~~~~~~~h~~~-------v~~v~~~~--~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 282 (340)
|.++++.+-..+..... +..+...| .+..+..++.++.+..+|..+++.+....... ...+.. ++
T Consensus 204 d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~----~~~~~~--~~ 277 (376)
T 3q7m_A 204 LMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS----VNDFIV--DG 277 (376)
T ss_dssp ETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCC----EEEEEE--ET
T ss_pred ECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCC----CCCceE--EC
Confidence 99999876555422100 00011111 24567777889999999999888776654322 233333 35
Q ss_pred cEEEEEeCCCcEEEEeCCCceeeeeecc-CCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 283 RLLLAGYDDFNCNVWDSMKTERAGILAG-HDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 283 ~~l~~g~~d~~i~iw~~~~~~~~~~~~~-h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
..+.+++.++.+..+|..+++..-.... ....+..... .+..|+.++.+|.+.++|
T Consensus 278 ~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d 334 (376)
T 3q7m_A 278 NRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWIN 334 (376)
T ss_dssp TEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEE
Confidence 6777888899999999988876554431 1122222222 234677777888877664
No 226
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.32 E-value=5.1e-10 Score=106.95 Aligned_cols=233 Identities=13% Similarity=0.082 Sum_probs=141.9
Q ss_pred CCcEEEEEECCCCCEEEEE-----eCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCC--------
Q psy15421 97 SSWVMTCAYAPSGSFVACG-----GLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGD-------- 163 (340)
Q Consensus 97 ~~~i~~v~~~~~~~~l~~~-----~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d-------- 163 (340)
...+..++|||||+++|.+ +....|+++|+.+++.. ...++.. ......|+++..|+.++.+
T Consensus 128 ~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~---~~~~~~~--k~~~~~WsDg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 128 TTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPL---ETPLKDV--KFSGISWLGNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp CCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEE---EEEEEEE--ESCCCEEETTTEEEEEESSCCC-----
T ss_pred cEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCC---ccccCCc--eeccEEEeCCCEEEEEEecCccccccc
Confidence 3457788999999998853 23357999999876421 1122211 1123456644457666665
Q ss_pred -----CeEEEEECCCCce--EEEEe--c-CCCCeEEEEEcCCCCEEEEEe----CCCcEEEEECCCCe-eeeEecCCCCC
Q psy15421 164 -----MSCALWDIETGQQ--CASFI--G-HTGDVMSLSLAPDMRTFVSGA----CDASAKLWDIRDGS-CKQTFPGHESD 228 (340)
Q Consensus 164 -----~~v~iwd~~~~~~--~~~~~--~-~~~~v~~~~~~~~~~~~~sg~----~dg~i~~wd~~~~~-~~~~~~~h~~~ 228 (340)
..|.+|++.+++. ...+. . |......+.++||+++++... .+..|.++|+.++. ....+..+...
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~ 282 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA 282 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc
Confidence 3499999987653 22222 2 344578899999999875432 23589999997763 34455556555
Q ss_pred eEEEEEecCCCEEE-EEeCC---CcEEEEeCcCCcE---EEEeecCCcccceEEEEEcCCCcEEEEEeC-CC--cEEEEe
Q psy15421 229 INAVTFFPNGWAFA-TGSDD---ATCRLFDIRADQE---LAMYSHDNIICGITSVAFSRSGRLLLAGYD-DF--NCNVWD 298 (340)
Q Consensus 229 v~~v~~~~~~~~l~-s~s~d---~~i~iwd~~~~~~---~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~-d~--~i~iw~ 298 (340)
.... ++++|..|+ ....+ +.|..+|+.+... .....+.. .+. .|+|+++.|+.... ++ .|++|+
T Consensus 283 ~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~---~~~--~~s~~g~~lv~~~~~~g~~~l~~~d 356 (693)
T 3iuj_A 283 DVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ---QVL--TVHSGSGYLFAEYMVDATARVEQFD 356 (693)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS---SCE--EEEEETTEEEEEEEETTEEEEEEEC
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC---CEE--EEEEECCEEEEEEEECCeeEEEEEE
Confidence 5554 566655554 44333 5788999876543 22222222 233 88899988876654 44 688898
Q ss_pred CCCceeeeeeccCCcceEEEEECCCCCEEEEeeCC----CcEEecC
Q psy15421 299 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWD----SFLRIWN 340 (340)
Q Consensus 299 ~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D----~~i~iW~ 340 (340)
............+.+.+..+++++++..|+....+ +++..||
T Consensus 357 ~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d 402 (693)
T 3iuj_A 357 YEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFE 402 (693)
T ss_dssp TTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEEC
T ss_pred CCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEE
Confidence 76443322222345677788888888766644433 6676664
No 227
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.32 E-value=2.9e-09 Score=93.92 Aligned_cols=261 Identities=9% Similarity=-0.062 Sum_probs=162.9
Q ss_pred CCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcc
Q psy15421 66 DSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGY 145 (340)
Q Consensus 66 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~ 145 (340)
++..++.++.++.|..+|..+++.+............... .+..++.++.++.+..+|..+++.... .........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~--~~~~~~~~~ 177 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWT--VNLDMPSLS 177 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE--EECCC----
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEE--EeCCCCcee
Confidence 4557778889999999999999987766544321111111 245677788899999999876643322 222111100
Q ss_pred ---eEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCCCC-------eEEEEEcC--CCCEEEEEeCCCcEEEEEC
Q psy15421 146 ---LSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGD-------VMSLSLAP--DMRTFVSGACDASAKLWDI 213 (340)
Q Consensus 146 ---v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~-------v~~~~~~~--~~~~~~sg~~dg~i~~wd~ 213 (340)
..... ..++.++.+..++.+..+|..+++........... +..+...| .+..++.++.++.+..+|.
T Consensus 178 ~~~~~~~~-~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~ 256 (376)
T 3q7m_A 178 LRGESAPT-TAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDL 256 (376)
T ss_dssp -CCCCCCE-EETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEET
T ss_pred ecCCCCcE-EECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEEC
Confidence 00001 12567778888999999999999887665422100 00011111 2456777888999999999
Q ss_pred CCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCc
Q psy15421 214 RDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFN 293 (340)
Q Consensus 214 ~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~ 293 (340)
++++.+-.... .....+... +..+..++.++.+..+|..+++.+........ ..+..... .+..|++++.+|.
T Consensus 257 ~tG~~~w~~~~--~~~~~~~~~--~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~-~~~~~~~~--~~~~l~v~~~~g~ 329 (376)
T 3q7m_A 257 RSGQIMWKREL--GSVNDFIVD--GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLH-RLLTSPVL--YNGNLVVGDSEGY 329 (376)
T ss_dssp TTCCEEEEECC--CCEEEEEEE--TTEEEEEETTCCEEEEETTTCCEEEEECTTTT-SCCCCCEE--ETTEEEEECTTSE
T ss_pred CCCcEEeeccC--CCCCCceEE--CCEEEEEcCCCeEEEEECCCCcEEEeecccCC-CcccCCEE--ECCEEEEEeCCCe
Confidence 99987655442 234444443 55777888899999999998887766541111 01112222 2567888899999
Q ss_pred EEEEeCCCceeeeeeccCCcceEE-EEECCCCCEEEEeeCCCcEEecC
Q psy15421 294 CNVWDSMKTERAGILAGHDNRVSC-LGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 294 i~iw~~~~~~~~~~~~~h~~~i~~-~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
+..+|..+++.+.........+.+ ... .+..|+.++.||.|..||
T Consensus 330 l~~~d~~tG~~~~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 330 LHWINVEDGRFVAQQKVDSSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEEEETTTCCEEEEEECCTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred EEEEECCCCcEEEEEecCCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 999999998877665543333322 222 234677788899998774
No 228
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.31 E-value=1.2e-10 Score=101.60 Aligned_cols=225 Identities=10% Similarity=0.025 Sum_probs=148.4
Q ss_pred CcEEEEEECCCCCEEEEEe--CCCeEEEEEccCCCCceEEE----EeecCCCcceEEEEEcCCCeEEEEeC------CCe
Q psy15421 98 SWVMTCAYAPSGSFVACGG--LDNICSIYSLKTREGNVRVS----RELPGHTGYLSCCRFLDDNQIVTSSG------DMS 165 (340)
Q Consensus 98 ~~i~~v~~~~~~~~l~~~~--~d~~v~i~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~l~~~~~------d~~ 165 (340)
..+..++++++|+.+++.. .++.+++|.+.. +..... .....+...+..+.+.+++.|..+.. +..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~--g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQ--DGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEET--TEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECC--CCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 5678899999999988853 233356676652 222100 01112445677888877776655443 578
Q ss_pred EEEEECCCCceEEEEecC------CCCeEEEEEcCCCC-EEEEEe---CCCcEEEEECCCCeeeeEecCCCCCeE-EEEE
Q psy15421 166 CALWDIETGQQCASFIGH------TGDVMSLSLAPDMR-TFVSGA---CDASAKLWDIRDGSCKQTFPGHESDIN-AVTF 234 (340)
Q Consensus 166 v~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~-~~~sg~---~dg~i~~wd~~~~~~~~~~~~h~~~v~-~v~~ 234 (340)
|.+||+.+++.+..+... ...+..++++|++. .+++.. .++.|.+||+.+++..+.+.+|..... ...+
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 999999998866665422 23468999998654 445555 689999999998887776665532111 1445
Q ss_pred ecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCC-cEEEEeCC---Cc-----eee
Q psy15421 235 FPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDF-NCNVWDSM---KT-----ERA 305 (340)
Q Consensus 235 ~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~-~i~iw~~~---~~-----~~~ 305 (340)
.++|..+.+.+.++.++.|.. .+..++|+|+++.|..+..++ .+..++.. .+ +..
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~----------------~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 238 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHL----------------GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELG 238 (343)
T ss_dssp EETTEECBEECTTSCEECCCC----------------CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHH
T ss_pred eECCEEEEeccCCCceeceec----------------ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhh
Confidence 667877888888888765531 256799999999888877665 44444421 10 000
Q ss_pred e--eeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 306 G--ILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 306 ~--~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
. ...++......++++++|.++++...++.|.+||
T Consensus 239 ~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d 275 (343)
T 2qe8_A 239 SKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVIT 275 (343)
T ss_dssp TTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEE
T ss_pred cceEecccCCCCceEEECCCCCEEEEccCCCeEEEEE
Confidence 0 1123445567799999999999999899999986
No 229
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.29 E-value=3.4e-10 Score=97.76 Aligned_cols=262 Identities=10% Similarity=0.016 Sum_probs=163.8
Q ss_pred ccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCce
Q psy15421 54 HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNV 133 (340)
Q Consensus 54 h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~ 133 (340)
+...+.++...+++...+ ++.+ |..+|. +++................+. +..+..++.++.+..++.. +. .
T Consensus 58 ~~~~~~~~~~~~~g~l~v-~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~--~ 128 (330)
T 3hxj_A 58 GEIIECRPSIGKDGTIYF-GSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GT--E 128 (330)
T ss_dssp GGEEEECCEETTTTEECC-SSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SC--E
T ss_pred CCCcccceEEecCCcEEE-ecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CC--E
Confidence 334557777777776444 4444 888886 555443333222212222222 4556677788888888865 32 2
Q ss_pred EEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q psy15421 134 RVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDI 213 (340)
Q Consensus 134 ~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~ 213 (340)
..... .+...+......+++.+..++.++.+..+|.. ++....+......+.++...+++.+++.. +.|..+|
T Consensus 129 ~~~~~--~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d- 201 (330)
T 3hxj_A 129 KWRFK--TKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN- 201 (330)
T ss_dssp EEEEE--CSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-
T ss_pred EEEEc--CCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-
Confidence 22222 22333333344456778888888999999998 77766665555567777777777765544 8899999
Q ss_pred CCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCc
Q psy15421 214 RDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFN 293 (340)
Q Consensus 214 ~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~ 293 (340)
.+++....+......+.++...++|. +..++.++.+..+|. +++.+..+..... .+..+.+.+++ .|..++.++.
T Consensus 202 ~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~--~~~~~~~~~~g-~l~v~t~~gg 276 (330)
T 3hxj_A 202 PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKR--IESSPVIGNTD-TIYFGSYDGH 276 (330)
T ss_dssp TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSC--CCSCCEECTTS-CEEEECTTCE
T ss_pred CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCC--ccccceEcCCC-eEEEecCCCC
Confidence 77766666655556677888888875 455666788888875 3444444433221 12344556565 4556778888
Q ss_pred EEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEe
Q psy15421 294 CNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 338 (340)
Q Consensus 294 i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~i 338 (340)
+..+|. +++....+.-....+.++...++|.. ..|+.+|.+++
T Consensus 277 l~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l-~~gt~~G~~~~ 319 (330)
T 3hxj_A 277 LYAINP-DGTEKWNFETGSWIIATPVIDENGTI-YFGTRNGKFYA 319 (330)
T ss_dssp EEEECT-TSCEEEEEECSSCCCSCCEECTTCCE-EEECTTSCEEE
T ss_pred EEEECC-CCcEEEEEEcCCccccceEEcCCCEE-EEEcCCCeEEE
Confidence 999985 66665555444566778888888875 45778888875
No 230
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.28 E-value=1.8e-09 Score=102.84 Aligned_cols=258 Identities=15% Similarity=0.136 Sum_probs=162.2
Q ss_pred CCeEEEEeCCCeEEEEeCCCCCeeEEeeCC--CCcEEEEEECC---CCCEEEEEe-----CCCeEEEEEccCCCCceEEE
Q psy15421 67 SRNLVSASQDGKLIVWDSYTTNKVHAIPLR--SSWVMTCAYAP---SGSFVACGG-----LDNICSIYSLKTREGNVRVS 136 (340)
Q Consensus 67 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--~~~i~~v~~~~---~~~~l~~~~-----~d~~v~i~~~~~~~~~~~~~ 136 (340)
+..++.++.|+.|..+|..+++.+...... ......+..+| ++..++..+ .++.+..||..+++......
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 457888889999999999999988766542 11111111122 444443322 36889999988776443322
Q ss_pred EeecCCC----------------------------cceEEEEEcC-CCeEEEEeCCC-------------------eEEE
Q psy15421 137 RELPGHT----------------------------GYLSCCRFLD-DNQIVTSSGDM-------------------SCAL 168 (340)
Q Consensus 137 ~~~~~~~----------------------------~~v~~~~~~~-~~~l~~~~~d~-------------------~v~i 168 (340)
. .++.. .......+.+ .+.++.+..++ .|..
T Consensus 201 ~-~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 201 T-VPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp S-SCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred c-cCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 1 11100 0011234443 45666676665 4999
Q ss_pred EECCCCceEEEEec--CC-------CCeEEEEEcCCCC---EEEEEeCCCcEEEEECCCCeeeeEecCCC----------
Q psy15421 169 WDIETGQQCASFIG--HT-------GDVMSLSLAPDMR---TFVSGACDASAKLWDIRDGSCKQTFPGHE---------- 226 (340)
Q Consensus 169 wd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~~~sg~~dg~i~~wd~~~~~~~~~~~~h~---------- 226 (340)
+|..+|+....+.. |. ..+.......+++ .++.++.+|.+.++|.++|+.+...+-..
T Consensus 280 lD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~ 359 (689)
T 1yiq_A 280 VNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMK 359 (689)
T ss_dssp EETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETT
T ss_pred EEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCcc
Confidence 99999998877764 21 1222223333554 68889999999999999998763221100
Q ss_pred ------------------C-----------CeEEEEEecCCCEEEEEeC-------------------------------
Q psy15421 227 ------------------S-----------DINAVTFFPNGWAFATGSD------------------------------- 246 (340)
Q Consensus 227 ------------------~-----------~v~~v~~~~~~~~l~s~s~------------------------------- 246 (340)
. .-..++++|+...+++...
T Consensus 360 ~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 439 (689)
T 1yiq_A 360 TGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMM 439 (689)
T ss_dssp TTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCC
T ss_pred CCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccccc
Confidence 0 0012678888766665422
Q ss_pred --------------CCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCC
Q psy15421 247 --------------DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHD 312 (340)
Q Consensus 247 --------------d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~ 312 (340)
+|.|+.||..+++.+..+..... .....+...+.+++.|+.|+.++.||..+++.+-.+.-..
T Consensus 440 p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~---~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~ 516 (689)
T 1yiq_A 440 PEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI---FNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAAS 516 (689)
T ss_dssp CSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS---CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC---ccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCC
Confidence 37799999999988877654332 2223555678899999999999999999999887665332
Q ss_pred -cceEEEEECCCCCEEE
Q psy15421 313 -NRVSCLGVTEDGMAVA 328 (340)
Q Consensus 313 -~~i~~~~~s~d~~~l~ 328 (340)
..-.-+.|+.||+.++
T Consensus 517 ~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 517 GVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp CCCSCCEEEEETTEEEE
T ss_pred CcccCceEEEECCEEEE
Confidence 2224466778886443
No 231
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.25 E-value=1.5e-09 Score=103.15 Aligned_cols=258 Identities=14% Similarity=0.060 Sum_probs=165.0
Q ss_pred CCeEEEEeCCCeEEEEeCCCCCeeEEeeCC-C----CcEEEEEECCCCCEEEEEeC------CCeEEEEEccCCCCceEE
Q psy15421 67 SRNLVSASQDGKLIVWDSYTTNKVHAIPLR-S----SWVMTCAYAPSGSFVACGGL------DNICSIYSLKTREGNVRV 135 (340)
Q Consensus 67 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~----~~i~~v~~~~~~~~l~~~~~------d~~v~i~~~~~~~~~~~~ 135 (340)
+..|+.++.|+.|..+|..+++.+...... . ..+...-.- .+..++.++. ++.+..+|..+++...+.
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 457888899999999999999998877654 1 111110000 2344444443 688999998876543332
Q ss_pred EEeecC----------------------------CCcceEEEEEcC-CCeEEEEeCCC-------------------eEE
Q psy15421 136 SRELPG----------------------------HTGYLSCCRFLD-DNQIVTSSGDM-------------------SCA 167 (340)
Q Consensus 136 ~~~~~~----------------------------~~~~v~~~~~~~-~~~l~~~~~d~-------------------~v~ 167 (340)
....+. .........+.+ .+.++.+..++ +|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 211000 000011234433 45666665543 599
Q ss_pred EEECCCCceEEEEec--CC-------CCeEEEEEcCCC---CEEEEEeCCCcEEEEECCCCeeeeEecCCC---------
Q psy15421 168 LWDIETGQQCASFIG--HT-------GDVMSLSLAPDM---RTFVSGACDASAKLWDIRDGSCKQTFPGHE--------- 226 (340)
Q Consensus 168 iwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~---~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~--------- 226 (340)
.+|..+|+....+.. |. ....-+....++ ..++.++.+|.+.++|.++|+.+..++...
T Consensus 287 AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~ 366 (677)
T 1kb0_A 287 ALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDK 366 (677)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECT
T ss_pred EEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCC
Confidence 999999998877654 21 123333444466 678899999999999999998765543110
Q ss_pred --CCe------------------------EEEEEecCCCEEEEEeC----------------------------------
Q psy15421 227 --SDI------------------------NAVTFFPNGWAFATGSD---------------------------------- 246 (340)
Q Consensus 227 --~~v------------------------~~v~~~~~~~~l~s~s~---------------------------------- 246 (340)
.++ ..++++|+...+++...
T Consensus 367 ~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~ 446 (677)
T 1kb0_A 367 HGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFF 446 (677)
T ss_dssp TSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEE
T ss_pred CCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccccc
Confidence 111 14688898777766543
Q ss_pred ---------CCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeec-cCCcceE
Q psy15421 247 ---------DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA-GHDNRVS 316 (340)
Q Consensus 247 ---------d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~-~h~~~i~ 316 (340)
.+.|..||..+++.+..+.+.. ++....+..++.+++.|+.|+.+++||..+++.+..+. ++...-.
T Consensus 447 ~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~---~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~ 523 (677)
T 1kb0_A 447 NAEPPKSKPFGRLLAWDPVAQKAAWSVEHVS---PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAA 523 (677)
T ss_dssp CSSCCCSCCEEEEEEEETTTTEEEEEEEESS---SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred ccccCCCCCccEEEEEeCCCCcEEeecCCCC---CCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccC
Confidence 2789999999998887765432 23334566678888899999999999999999887765 3322233
Q ss_pred EEEECCCCCEEE
Q psy15421 317 CLGVTEDGMAVA 328 (340)
Q Consensus 317 ~~~~s~d~~~l~ 328 (340)
-+.|+.+|+.++
T Consensus 524 p~~y~~~G~~~v 535 (677)
T 1kb0_A 524 PSTYMVDGRQYV 535 (677)
T ss_dssp CEEEEETTEEEE
T ss_pred CEEEEeCCEEEE
Confidence 456678886444
No 232
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.25 E-value=1.6e-12 Score=114.70 Aligned_cols=177 Identities=14% Similarity=0.099 Sum_probs=101.6
Q ss_pred CCCeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEecCCCCC-eE-
Q psy15421 153 DDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD-IN- 230 (340)
Q Consensus 153 ~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~-v~- 230 (340)
.++.+++++.|+.|..||..+|+....+.. +.+.+..+.+++..+++++.||.|..||.++++.+..++.+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 467888999999999999999999887765 45555556677778888889999999999888876555433211 10
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeecc
Q psy15421 231 AVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG 310 (340)
Q Consensus 231 ~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~ 310 (340)
+..+. ++..+++++.|+.++.||..+++.+..+.... ...++|++..+++++.|+.++.||..+++..-.+..
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~------~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF------ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC------cccccccCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence 00111 34467788889999999999888776654322 234567889999999999999999988876544332
Q ss_pred CCcceEEEEECCCC---CEEEEeeCCCcEEecC
Q psy15421 311 HDNRVSCLGVTEDG---MAVATGSWDSFLRIWN 340 (340)
Q Consensus 311 h~~~i~~~~~s~d~---~~l~s~s~D~~i~iW~ 340 (340)
+. ....+++++. ..++.++.||.|+.||
T Consensus 159 ~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d 189 (369)
T 2hz6_A 159 FD--YAASLPEDDVDYKMSHFVSNGDGLVVTVD 189 (369)
T ss_dssp EE--ECCBCCCCCTTCCCCEEEEETSCEEEEEC
T ss_pred cc--ccCccccCCccccceEEEECCCCEEEEEE
Confidence 11 1223344432 4577788899998886
No 233
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.22 E-value=2.8e-09 Score=93.27 Aligned_cols=244 Identities=12% Similarity=-0.018 Sum_probs=154.9
Q ss_pred eEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEe----------CCCeEEEEEccCCCCceEEEEeecCC--C--
Q psy15421 78 KLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGG----------LDNICSIYSLKTREGNVRVSRELPGH--T-- 143 (340)
Q Consensus 78 ~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~----------~d~~v~i~~~~~~~~~~~~~~~~~~~--~-- 143 (340)
+|.+.|..+.+.+.+++....+ .+.++||+++++.+. .++.|.+||..+.+. ..+++.. .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v----v~~I~v~~~~~~ 120 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP----IADIELPDAPRF 120 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE----EEEEEETTSCSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE----EEEEECCCcccc
Confidence 8889999999999998876666 699999999998886 368899999987642 2332211 0
Q ss_pred ---cceEEEEEcCCC-eEEEEeC--CCeEEE--EECCCCceEEEEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECC
Q psy15421 144 ---GYLSCCRFLDDN-QIVTSSG--DMSCAL--WDIETGQQCASFIGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIR 214 (340)
Q Consensus 144 ---~~v~~~~~~~~~-~l~~~~~--d~~v~i--wd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~sg~~dg~i~~wd~~ 214 (340)
..-..+.+++++ .++.+.. +..+.+ +|+.+ +..+.. .+ + ..+.|++ ..+++.+.||.+.+.|+.
T Consensus 121 ~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v-~~-~--~~~~p~g~~~~~~~~~dg~~~~vd~~ 193 (368)
T 1mda_H 121 SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS-AS-C--FHIHPGAAATHYLGSCPASLAASDLA 193 (368)
T ss_dssp CBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC-SS-C--CCCEEEETTEEECCCCTTSCEEEECC
T ss_pred ccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC-CC-c--eEEccCCCeEEEEEcCCCCEEEEECc
Confidence 112234566665 4555543 467888 99876 333321 11 1 1223444 355667789999989987
Q ss_pred C-----Ceeee----EecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCc--EEEEeecC-------C-cccceEE
Q psy15421 215 D-----GSCKQ----TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ--ELAMYSHD-------N-IICGITS 275 (340)
Q Consensus 215 ~-----~~~~~----~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~--~~~~~~~~-------~-~~~~i~~ 275 (340)
+ ++... .+.-...+. . .+++..++-.+. +.+.+.|..... .+..+... . ...+...
T Consensus 194 ~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~ 268 (368)
T 1mda_H 194 AAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQM 268 (368)
T ss_dssp SSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSC
T ss_pred cccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCccee
Confidence 6 43221 111112233 3 666666555555 899999986432 11111110 0 0111222
Q ss_pred EEEcCCCcEEEEEeC-C--------CcEEEEeCCCceeeeeeccCCcceEEEEECCCCC-EEEEee-CCCcEEecC
Q psy15421 276 VAFSRSGRLLLAGYD-D--------FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM-AVATGS-WDSFLRIWN 340 (340)
Q Consensus 276 ~~~s~~~~~l~~g~~-d--------~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~-~l~s~s-~D~~i~iW~ 340 (340)
++|+|+++.+.++.. + ..+.++|..+.+.+..+.-.. ....++|+|||+ .+++.. .++.|.|+|
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID 343 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYD 343 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEE
Confidence 689999998887543 2 356699999998888775433 678999999997 566776 589999886
No 234
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.21 E-value=7.3e-10 Score=95.65 Aligned_cols=256 Identities=11% Similarity=0.034 Sum_probs=158.9
Q ss_pred EEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecC
Q psy15421 62 HWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPG 141 (340)
Q Consensus 62 ~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~ 141 (340)
....++ .+..++.++.|..|| .+++...........+.++...+++.+++ +..+ +..++. ++... .....
T Consensus 26 ~~d~~g-~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~--l~~~d~-~g~~~--~~~~~-- 95 (330)
T 3hxj_A 26 ILAKNG-TIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYF-GSDK--VYAINP-DGTEK--WRFDT-- 95 (330)
T ss_dssp EECTTS-CEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTEECC-SSCE--EEEECC-CGGGG--GGSCC--
T ss_pred eEccCC-eEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCcEEE-ecCc--EEEECC-CCcEE--EEEEC--
Confidence 333455 455667788999999 77877655554444456666767776544 4444 666664 22211 11111
Q ss_pred CCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeE
Q psy15421 142 HTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT 221 (340)
Q Consensus 142 ~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~ 221 (340)
........... ++.+..++.++.+..+|.. ++...........+.++...+++. +..++.++.|..+|.. ++....
T Consensus 96 ~~~~~~~~~~~-~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~ 171 (330)
T 3hxj_A 96 KKAIVSDFTIF-EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWR 171 (330)
T ss_dssp -----CCEEEE-TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEE
T ss_pred CCCcccCceEE-CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEE
Confidence 11111111122 6677788889999999998 777666655555566677777776 5557788999999988 776666
Q ss_pred ecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCC
Q psy15421 222 FPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 301 (340)
Q Consensus 222 ~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~ 301 (340)
+......+.++.+.+++..++.. +.+..+| .+++.+..+.... ..+.++...++|.+. +++.++.+..++ .+
T Consensus 172 ~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~--~~~~~~~~~~~g~l~-v~t~~~gl~~~~-~~ 243 (330)
T 3hxj_A 172 FKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGY--WTVTRPAISEDGTIY-VTSLDGHLYAIN-PD 243 (330)
T ss_dssp EECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSS--CCCSCCEECTTSCEE-EEETTTEEEEEC-TT
T ss_pred EecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCC--cceeceEECCCCeEE-EEcCCCeEEEEC-CC
Confidence 65555566777787888765544 8899999 5555555443222 236677888887654 466677788887 45
Q ss_pred ceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 302 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 302 ~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
++.+..+......+..+.+.+++. |..++.++.|..+|
T Consensus 244 g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 244 GTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAIN 281 (330)
T ss_dssp SCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEEC
T ss_pred CCEeEEeeCCCCccccceEcCCCe-EEEecCCCCEEEEC
Confidence 555544444444445566666665 55566676666654
No 235
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.20 E-value=5.8e-08 Score=85.82 Aligned_cols=225 Identities=12% Similarity=0.070 Sum_probs=145.3
Q ss_pred CCCCEEEE-EeCCCeEEEEEccCCCCceEEEEeec------C-CCcceEEEEEcCCCeEEEEeCC------CeEEEEECC
Q psy15421 107 PSGSFVAC-GGLDNICSIYSLKTREGNVRVSRELP------G-HTGYLSCCRFLDDNQIVTSSGD------MSCALWDIE 172 (340)
Q Consensus 107 ~~~~~l~~-~~~d~~v~i~~~~~~~~~~~~~~~~~------~-~~~~v~~~~~~~~~~l~~~~~d------~~v~iwd~~ 172 (340)
+++++|+. +..++.|.++|+.+.....++...+. . ....-..+...+++.++++.++ +.+.++|.+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECC
Confidence 77777765 55678899999876544455555542 0 0011122334566666666555 789999999
Q ss_pred CCceEEEEecCCC---CeEEEEEcCCCCEEEEEe-------------------CCCcEEEEECCCCeeeeEecCC--CCC
Q psy15421 173 TGQQCASFIGHTG---DVMSLSLAPDMRTFVSGA-------------------CDASAKLWDIRDGSCKQTFPGH--ESD 228 (340)
Q Consensus 173 ~~~~~~~~~~~~~---~v~~~~~~~~~~~~~sg~-------------------~dg~i~~wd~~~~~~~~~~~~h--~~~ 228 (340)
+++.+.++..-.. ....+-|+|+++.+++.. .+.+|.+||+.+++.+.++.-- ...
T Consensus 173 T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~ 252 (462)
T 2ece_A 173 SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRM 252 (462)
T ss_dssp TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEE
T ss_pred CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCc
Confidence 9998887763222 234577899999988874 4799999999998877777532 123
Q ss_pred eEEEEE--ecCCCEEEEEe------CCCcEEEEeCcCCcE--EEEe--ec---CC-----------cccceEEEEEcCCC
Q psy15421 229 INAVTF--FPNGWAFATGS------DDATCRLFDIRADQE--LAMY--SH---DN-----------IICGITSVAFSRSG 282 (340)
Q Consensus 229 v~~v~~--~~~~~~l~s~s------~d~~i~iwd~~~~~~--~~~~--~~---~~-----------~~~~i~~~~~s~~~ 282 (340)
...+.| +|+++++..++ .+++|.+|....+.. ...+ .. .. .......+.+||||
T Consensus 253 P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DG 332 (462)
T 2ece_A 253 ALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDD 332 (462)
T ss_dssp EEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTS
T ss_pred cceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCC
Confidence 445656 99998877666 466887766554321 1111 10 00 01236788999999
Q ss_pred cEEEEEeC-CCcEEEEeCCC---ceeeeeec-c-------C---C---cceEEEEECCCCCEEEEee
Q psy15421 283 RLLLAGYD-DFNCNVWDSMK---TERAGILA-G-------H---D---NRVSCLGVTEDGMAVATGS 331 (340)
Q Consensus 283 ~~l~~g~~-d~~i~iw~~~~---~~~~~~~~-~-------h---~---~~i~~~~~s~d~~~l~s~s 331 (340)
++|.++.. .+.|.+|++.. .+.+..+. + | . +.-..+++||||++|+.+.
T Consensus 333 rfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 333 KFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 99888764 68999999752 23333322 1 1 0 1246789999999888765
No 236
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.14 E-value=1.8e-08 Score=95.60 Aligned_cols=269 Identities=13% Similarity=0.123 Sum_probs=169.7
Q ss_pred CCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCc----------E-EEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEE
Q psy15421 67 SRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSW----------V-MTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRV 135 (340)
Q Consensus 67 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~----------i-~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~ 135 (340)
+..++.++.++.|..+|..+++.+......... + ..+++ .+..++.++.|+.+..+|..+++....
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~- 142 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWS- 142 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEE-
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeee-
Confidence 456777888999999999999988776543211 0 01111 356777888899999999877654333
Q ss_pred EEeecCC--CcceEEEEEcCCCeEEEEeC------CCeEEEEECCCCceEEEEecCCC----------------------
Q psy15421 136 SRELPGH--TGYLSCCRFLDDNQIVTSSG------DMSCALWDIETGQQCASFIGHTG---------------------- 185 (340)
Q Consensus 136 ~~~~~~~--~~~v~~~~~~~~~~l~~~~~------d~~v~iwd~~~~~~~~~~~~~~~---------------------- 185 (340)
...... ...+.......++.++.+.. ++.|..+|..+|+.+..+.....
T Consensus 143 -~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 221 (668)
T 1kv9_A 143 -QQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQ 221 (668)
T ss_dssp -EECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSC
T ss_pred -eccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccc
Confidence 222111 01111100012455555433 58999999999998877652110
Q ss_pred ---------CeEEEEEcCCCCEEEEEeCCCc-------------------EEEEECCCCeeeeEecC--CC-------CC
Q psy15421 186 ---------DVMSLSLAPDMRTFVSGACDAS-------------------AKLWDIRDGSCKQTFPG--HE-------SD 228 (340)
Q Consensus 186 ---------~v~~~~~~~~~~~~~sg~~dg~-------------------i~~wd~~~~~~~~~~~~--h~-------~~ 228 (340)
....+++.|+...++.+..++. |.-+|.++|+.+-.++. |. .+
T Consensus 222 ~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~ 301 (668)
T 1kv9_A 222 YWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQ 301 (668)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCC
Confidence 0124688888888888887763 99999999998766653 22 23
Q ss_pred eEEEEEecCCC---EEEEEeCCCcEEEEeCcCCcEEEEeecCCc----------ccc-----------------------
Q psy15421 229 INAVTFFPNGW---AFATGSDDATCRLFDIRADQELAMYSHDNI----------ICG----------------------- 272 (340)
Q Consensus 229 v~~v~~~~~~~---~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~----------~~~----------------------- 272 (340)
.....+..+|+ .++.++.+|.++++|..+++.+........ ..+
T Consensus 302 ~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~ 381 (668)
T 1kv9_A 302 ITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAH 381 (668)
T ss_dssp EEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSS
T ss_pred cEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCcccc
Confidence 33333444665 688999999999999998887743321110 000
Q ss_pred -eEEEEEcCCCcEEEEEe------------------------------------CCCcEEEEeCCCceeeeeeccCCcce
Q psy15421 273 -ITSVAFSRSGRLLLAGY------------------------------------DDFNCNVWDSMKTERAGILAGHDNRV 315 (340)
Q Consensus 273 -i~~~~~s~~~~~l~~g~------------------------------------~d~~i~iw~~~~~~~~~~~~~h~~~i 315 (340)
-..++++|+..++.+.. .++.|..||..+++..=....+ ..+
T Consensus 382 ~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~-~~~ 460 (668)
T 1kv9_A 382 NWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP-THW 460 (668)
T ss_dssp CSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES-SSC
T ss_pred CCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC-CCC
Confidence 01267888766655421 2378999999888875544322 333
Q ss_pred EEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 316 SCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 316 ~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
....+...+.+++.++.|+.++.||
T Consensus 461 ~~~~~~t~gg~vf~g~~dg~l~a~d 485 (668)
T 1kv9_A 461 NGGTLSTAGNLVFQGTAAGQMHAYS 485 (668)
T ss_dssp CCCEEEETTTEEEEECTTSEEEEEE
T ss_pred cCceeEeCCCEEEEECCcccchhhh
Confidence 3334455677888899999999885
No 237
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.04 E-value=3e-06 Score=70.71 Aligned_cols=239 Identities=9% Similarity=-0.009 Sum_probs=141.3
Q ss_pred CeEEEEeCCCCCee-----EEeeCCCCcEEEEEECCCCCEEEEEe-CCCeEEEEEccCCCCceEEEEeecCCCcceEEEE
Q psy15421 77 GKLIVWDSYTTNKV-----HAIPLRSSWVMTCAYAPSGSFVACGG-LDNICSIYSLKTREGNVRVSRELPGHTGYLSCCR 150 (340)
Q Consensus 77 ~~i~iwd~~~~~~~-----~~~~~~~~~i~~v~~~~~~~~l~~~~-~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~ 150 (340)
+.|+.+++...... ..+......+..+++++++..|+.+. ..+.|..++...... . ............+.
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~--~~~~~~~~~p~~ia 85 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP--T--TIIRQDLGSPEGIA 85 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC--E--EEECTTCCCEEEEE
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc--E--EEEECCCCCccEEE
Confidence 46777776544321 11111123467889999766555544 567888888754321 1 11222222345566
Q ss_pred EcC-CCeEE-EEeCCCeEEEEECCCCceEEEEec-CCCCeEEEEEcCCCCEEEEEeC---CCcEEEEECCCCeeeeEe-c
Q psy15421 151 FLD-DNQIV-TSSGDMSCALWDIETGQQCASFIG-HTGDVMSLSLAPDMRTFVSGAC---DASAKLWDIRDGSCKQTF-P 223 (340)
Q Consensus 151 ~~~-~~~l~-~~~~d~~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~sg~~---dg~i~~wd~~~~~~~~~~-~ 223 (340)
+.+ ++.+. +-...+.|.++++..... ..+.. .......++++|++..++.+.. .+.|..+++.. .....+ .
T Consensus 86 ~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~ 163 (267)
T 1npe_A 86 LDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQ 163 (267)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEEC
T ss_pred EEecCCeEEEEECCCCEEEEEEcCCCCE-EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEE
Confidence 654 45544 445578899999875332 22222 2246789999996555544433 46888888753 322222 2
Q ss_pred CCCCCeEEEEEecCCC-EEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCc
Q psy15421 224 GHESDINAVTFFPNGW-AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT 302 (340)
Q Consensus 224 ~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~ 302 (340)
......+.++++|++. .+++-...+.|..+|............. .....++.. .+.++++...++.|..++..++
T Consensus 164 ~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~---~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g 239 (267)
T 1npe_A 164 DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL---QYPFAVTSY-GKNLYYTDWKTNSVIAMDLAIS 239 (267)
T ss_dssp TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC---CSEEEEEEE-TTEEEEEETTTTEEEEEETTTT
T ss_pred CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCC---CCceEEEEe-CCEEEEEECCCCeEEEEeCCCC
Confidence 2234578999999765 4566666789999998754333322211 123455554 4555555556789999998888
Q ss_pred eeeeeeccCC-cceEEEEECCCCC
Q psy15421 303 ERAGILAGHD-NRVSCLGVTEDGM 325 (340)
Q Consensus 303 ~~~~~~~~h~-~~i~~~~~s~d~~ 325 (340)
+.+..+.... .....+++.|++.
T Consensus 240 ~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 240 KEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEEEECCSSCCCCCCEEEECSCC
T ss_pred CceEEEccccccccceeeecCccC
Confidence 8777765332 2467788888875
No 238
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.03 E-value=2.8e-07 Score=76.41 Aligned_cols=207 Identities=12% Similarity=0.073 Sum_probs=134.7
Q ss_pred eeEEeeCCC-CcEEEEEECCCCCEEEEEeC--CCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCe
Q psy15421 89 KVHAIPLRS-SWVMTCAYAPSGSFVACGGL--DNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMS 165 (340)
Q Consensus 89 ~~~~~~~~~-~~i~~v~~~~~~~~l~~~~~--d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~ 165 (340)
.+.+++... .....+.|++++.++++.+. ++.|+++|+.+++.. ....+..+. ....+.+..+..+++.-.++.
T Consensus 11 vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~--~~i~l~~~~-fgeGi~~~g~~lyv~t~~~~~ 87 (266)
T 2iwa_A 11 VLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVE--NIHKMDDSY-FGEGLTLLNEKLYQVVWLKNI 87 (266)
T ss_dssp EEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEE--EEEECCTTC-CEEEEEEETTEEEEEETTCSE
T ss_pred EEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEE--EEEecCCCc-ceEEEEEeCCEEEEEEecCCE
Confidence 344554332 24678999998765555553 578999999876421 111222222 222333333333445556899
Q ss_pred EEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEecCC--C---CCeEEEEEecCCCE
Q psy15421 166 CALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGH--E---SDINAVTFFPNGWA 240 (340)
Q Consensus 166 v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h--~---~~v~~v~~~~~~~~ 240 (340)
+.++|..+.+.+..+..-...- ..+++|++.++.+..++.|.++|..+.+....++-- . ..++.+.|. ++..
T Consensus 88 v~viD~~t~~v~~~i~~g~~~g--~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~l 164 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQMKDG--WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEV 164 (266)
T ss_dssp EEEEETTTTEEEEEEECCSSSC--CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECCCCcEEEEEECCCCCe--EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEE
Confidence 9999999998888775321222 335567777776667899999999998877666421 1 136788888 7877
Q ss_pred EEEEeCCCcEEEEeCcCCcEEEEeecCCc-----------ccceEEEEEcCCCcEEE-EEeCCCcEEEEeCCC
Q psy15421 241 FATGSDDATCRLFDIRADQELAMYSHDNI-----------ICGITSVAFSRSGRLLL-AGYDDFNCNVWDSMK 301 (340)
Q Consensus 241 l~s~s~d~~i~iwd~~~~~~~~~~~~~~~-----------~~~i~~~~~s~~~~~l~-~g~~d~~i~iw~~~~ 301 (340)
++....++.|.+.|..+++.+..+..... ....+.++|+|+++.++ ++....++...++..
T Consensus 165 yvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 165 WANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 77777789999999999888776643211 12468999999986554 555677777777543
No 239
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.02 E-value=5.8e-08 Score=92.12 Aligned_cols=270 Identities=11% Similarity=0.043 Sum_probs=148.2
Q ss_pred EEEEcC-CCCeEEEEeCCC-----------eEEEEeCCCCCeeE--Eee-CCCCcEEEEEECCCCCEEEEEeC-CCeEEE
Q psy15421 60 AMHWGS-DSRNLVSASQDG-----------KLIVWDSYTTNKVH--AIP-LRSSWVMTCAYAPSGSFVACGGL-DNICSI 123 (340)
Q Consensus 60 ~~~~s~-~~~~l~s~~~d~-----------~i~iwd~~~~~~~~--~~~-~~~~~i~~v~~~~~~~~l~~~~~-d~~v~i 123 (340)
.+++.+ +++.++.|+.+. .+.+||..+.+... .++ .+......+++.++++.++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 455666 888888887643 58899988776432 222 23334445678899999999984 457899
Q ss_pred EEccCCCCceEEEEeecCCCcceEEEEEc-CCCeEEEEe-CC-----CeEEEEECCCCceEEEE----ecCCCCeEEEEE
Q psy15421 124 YSLKTREGNVRVSRELPGHTGYLSCCRFL-DDNQIVTSS-GD-----MSCALWDIETGQQCASF----IGHTGDVMSLSL 192 (340)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~-~d-----~~v~iwd~~~~~~~~~~----~~~~~~v~~~~~ 192 (340)
||..+. .+.....++.....- .+... ++..++.|+ .+ ..+.+||..+++-...- ......-....+
T Consensus 270 yd~~t~--~W~~~~~~~~~R~~~-s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~ 346 (656)
T 1k3i_A 270 YDSSSD--SWIPGPDMQVARGYQ-SSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLY 346 (656)
T ss_dssp EEGGGT--EEEECCCCSSCCSSC-EEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGG
T ss_pred ecCcCC--ceeECCCCCcccccc-ceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccccee
Confidence 998653 222211222211122 22333 445556665 33 56899999876532210 000000000112
Q ss_pred cCCCCEEEEEeCCC---------cEEEEECCCCeeeeEecCCC---------CCeEEEEEec-CCCEEEEEeCCC-----
Q psy15421 193 APDMRTFVSGACDA---------SAKLWDIRDGSCKQTFPGHE---------SDINAVTFFP-NGWAFATGSDDA----- 248 (340)
Q Consensus 193 ~~~~~~~~sg~~dg---------~i~~wd~~~~~~~~~~~~h~---------~~v~~v~~~~-~~~~l~s~s~d~----- 248 (340)
..++..++.|+.+| .+..||..+..-......+. ..-.++.+.. +++.++.|+.++
T Consensus 347 ~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~ 426 (656)
T 1k3i_A 347 RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSD 426 (656)
T ss_dssp TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSB
T ss_pred ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCC
Confidence 34555556665554 45778887665332221111 1223444543 678888888543
Q ss_pred ------cEEEEeCcCCcEEEEe-ecCCcccceEEEEEcCCCcEEEEEeCC-----------CcEEEEeCCCcee--eeee
Q psy15421 249 ------TCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDD-----------FNCNVWDSMKTER--AGIL 308 (340)
Q Consensus 249 ------~i~iwd~~~~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~~g~~d-----------~~i~iw~~~~~~~--~~~~ 308 (340)
.+.+||..+..-.... ......-.-.+++..|++++++.|+.+ ..+.+||..+.+- +..+
T Consensus 427 ~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~ 506 (656)
T 1k3i_A 427 ATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPN 506 (656)
T ss_dssp CCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCC
T ss_pred cCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCC
Confidence 6778887654322211 011111012345677899999999864 4688999765432 2222
Q ss_pred ccCCcceEEEEECCCCCEEEEeeC
Q psy15421 309 AGHDNRVSCLGVTEDGMAVATGSW 332 (340)
Q Consensus 309 ~~h~~~i~~~~~s~d~~~l~s~s~ 332 (340)
......-.++.+.|||+.++.||.
T Consensus 507 ~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 507 SIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp SSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCccccccHhhcCCCcEEEecCCC
Confidence 222222244567899999999985
No 240
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.02 E-value=1.3e-07 Score=83.51 Aligned_cols=220 Identities=14% Similarity=0.092 Sum_probs=136.2
Q ss_pred CCCCeEE-EEeCCCeEEEEeCCCC----CeeEEee-------CCCCcEEEEEECCCCCEEEEEeCC------CeEEEEEc
Q psy15421 65 SDSRNLV-SASQDGKLIVWDSYTT----NKVHAIP-------LRSSWVMTCAYAPSGSFVACGGLD------NICSIYSL 126 (340)
Q Consensus 65 ~~~~~l~-s~~~d~~i~iwd~~~~----~~~~~~~-------~~~~~i~~v~~~~~~~~l~~~~~d------~~v~i~~~ 126 (340)
+++++|+ ++-.+..|+++|+.+. +...++. ........+.++|+| +++++..+ +.+.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 7777655 5667889999998644 3333441 112245677889999 65555444 67889987
Q ss_pred cCCCCceEEEEeec--CCC-cceEEEEEcCCC-eEEEEe-------------------CCCeEEEEECCCCceEEEEecC
Q psy15421 127 KTREGNVRVSRELP--GHT-GYLSCCRFLDDN-QIVTSS-------------------GDMSCALWDIETGQQCASFIGH 183 (340)
Q Consensus 127 ~~~~~~~~~~~~~~--~~~-~~v~~~~~~~~~-~l~~~~-------------------~d~~v~iwd~~~~~~~~~~~~~ 183 (340)
.+.+ +....+ ... ..-..+.|+++. .+++.. .+.+|.+||+.+++...++..-
T Consensus 172 ~T~~----v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 172 YSFE----PLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp TTCC----EEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred CCCe----EEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 7654 223332 122 122235566654 455553 2789999999988777766542
Q ss_pred -C-CCeEEEEE--cCCCCEEEEEe------CCCcEEEEECCCCee--eeE--ecCC----------------CCCeEEEE
Q psy15421 184 -T-GDVMSLSL--APDMRTFVSGA------CDASAKLWDIRDGSC--KQT--FPGH----------------ESDINAVT 233 (340)
Q Consensus 184 -~-~~v~~~~~--~~~~~~~~sg~------~dg~i~~wd~~~~~~--~~~--~~~h----------------~~~v~~v~ 233 (340)
. .....+.| +|++++++.++ .+++|.+|....++. .+. +... ......|.
T Consensus 248 ~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~ 327 (462)
T 2ece_A 248 EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDID 327 (462)
T ss_dssp TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEE
T ss_pred CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEE
Confidence 1 23445555 99999877665 567888766554431 111 1110 13467899
Q ss_pred EecCCCEEEEEeC-CCcEEEEeCcCC---cEEEEeecCCc------------ccceEEEEEcCCCcEEEEEe
Q psy15421 234 FFPNGWAFATGSD-DATCRLFDIRAD---QELAMYSHDNI------------ICGITSVAFSRSGRLLLAGY 289 (340)
Q Consensus 234 ~~~~~~~l~s~s~-d~~i~iwd~~~~---~~~~~~~~~~~------------~~~i~~~~~s~~~~~l~~g~ 289 (340)
++|||++|..+.. .+.|.+||+... +.+......+. ......+.++|||++|+++.
T Consensus 328 lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 328 ISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp ECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999998766554 789999998632 33333322110 01357789999999999887
No 241
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.98 E-value=1.8e-06 Score=71.60 Aligned_cols=193 Identities=11% Similarity=-0.050 Sum_probs=130.6
Q ss_pred cEEEEEEcCCCCeEEEEeC--CCeEEEEeCCCCCeeEEeeCCCC-cEEEEEECCCCCEE-EEEeCCCeEEEEEccCCCCc
Q psy15421 57 KIYAMHWGSDSRNLVSASQ--DGKLIVWDSYTTNKVHAIPLRSS-WVMTCAYAPSGSFV-ACGGLDNICSIYSLKTREGN 132 (340)
Q Consensus 57 ~v~~~~~s~~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~-~i~~v~~~~~~~~l-~~~~~d~~v~i~~~~~~~~~ 132 (340)
....+.|++++...++.+. ++.|++.|..+++.+..+..... ....+++. +..| ++.-.++.+.++|..+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~-- 97 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLS-- 97 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTE--
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCc--
Confidence 3579999998766666654 68999999999999888764332 22234444 4444 444567899999987643
Q ss_pred eEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCC-----CCeEEEEEcCCCCEEEEEeCCCc
Q psy15421 133 VRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHT-----GDVMSLSLAPDMRTFVSGACDAS 207 (340)
Q Consensus 133 ~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~sg~~dg~ 207 (340)
...+++.....-..+.+ +++.++.+.+++.+.++|..+.+....+..-. ..++.+.+. ++..++....++.
T Consensus 98 --v~~~i~~g~~~g~glt~-Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~ 173 (266)
T 2iwa_A 98 --NIKNFTHQMKDGWGLAT-DGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDC 173 (266)
T ss_dssp --EEEEEECCSSSCCEEEE-CSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE
T ss_pred --EEEEEECCCCCeEEEEE-CCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCe
Confidence 23333211111112332 45566666678999999999988777665321 236678887 6766666667899
Q ss_pred EEEEECCCCeeeeEecCC-------------CCCeEEEEEecCCC-EEEEEeCCCcEEEEeCcC
Q psy15421 208 AKLWDIRDGSCKQTFPGH-------------ESDINAVTFFPNGW-AFATGSDDATCRLFDIRA 257 (340)
Q Consensus 208 i~~wd~~~~~~~~~~~~h-------------~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~ 257 (340)
|.+.|..+++.+..+.-. ....+.|+|+|++. .|+++...+.+...++..
T Consensus 174 V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 174 IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 999999999987776521 12468999999875 566777788888887754
No 242
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.96 E-value=3.8e-07 Score=84.87 Aligned_cols=268 Identities=13% Similarity=0.073 Sum_probs=162.7
Q ss_pred CCeEEEEeC-CCeEEEEeC-CCCCeeEEeeCCCCc----------E-EEEEECCCCCEEEEEeCCCeEEEEEccCCCCce
Q psy15421 67 SRNLVSASQ-DGKLIVWDS-YTTNKVHAIPLRSSW----------V-MTCAYAPSGSFVACGGLDNICSIYSLKTREGNV 133 (340)
Q Consensus 67 ~~~l~s~~~-d~~i~iwd~-~~~~~~~~~~~~~~~----------i-~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~ 133 (340)
+..+..++. ++.|.-+|. .+++.+......... + ..+++ .+..++.++.|+.+..+|..+++...
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 445666677 899999999 899988766533210 0 01111 35677778889998888887765433
Q ss_pred EEEEeecCCCc--ceEEEEEcCCCeEEEEeC------CCeEEEEECCCCceEEEEecCCCC-------------------
Q psy15421 134 RVSRELPGHTG--YLSCCRFLDDNQIVTSSG------DMSCALWDIETGQQCASFIGHTGD------------------- 186 (340)
Q Consensus 134 ~~~~~~~~~~~--~v~~~~~~~~~~l~~~~~------d~~v~iwd~~~~~~~~~~~~~~~~------------------- 186 (340)
......+.. .+.......++.++.++. ++.|..+|..+|+.+.++......
T Consensus 140 --~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~ 217 (571)
T 2ad6_A 140 --EVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQF 217 (571)
T ss_dssp --EEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred --EecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccc
Confidence 233322110 111100012456665554 789999999999988766532110
Q ss_pred ------------------e-EEEEEcCCCCEEEEEeCC----------------CcEEEEECCCCeeeeEecC--CC---
Q psy15421 187 ------------------V-MSLSLAPDMRTFVSGACD----------------ASAKLWDIRDGSCKQTFPG--HE--- 226 (340)
Q Consensus 187 ------------------v-~~~~~~~~~~~~~sg~~d----------------g~i~~wd~~~~~~~~~~~~--h~--- 226 (340)
+ ..+++.++...++.+..+ +.|..+|.++++.+-.++. |.
T Consensus 218 ~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d 297 (571)
T 2ad6_A 218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWD 297 (571)
T ss_dssp SHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSC
T ss_pred ccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccc
Confidence 0 235666766666665532 3599999999988766542 21
Q ss_pred -----CCeEEEEEecCCC---EEEEEeCCCcEEEEeCcCCcEEEEeecCCcc-----------cce--------------
Q psy15421 227 -----SDINAVTFFPNGW---AFATGSDDATCRLFDIRADQELAMYSHDNII-----------CGI-------------- 273 (340)
Q Consensus 227 -----~~v~~v~~~~~~~---~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~-----------~~i-------------- 273 (340)
.++ -+...++|+ .++.++.+|.++.+|..+++.+..+...... .++
T Consensus 298 ~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~ 376 (571)
T 2ad6_A 298 FAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGT 376 (571)
T ss_dssp CCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEE
T ss_pred cccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCce
Confidence 222 123334674 5778899999999999988877655322100 000
Q ss_pred ------------EEEEEcCCCcEEEEEe-------------------------------------CCCcEEEEeCCCcee
Q psy15421 274 ------------TSVAFSRSGRLLLAGY-------------------------------------DDFNCNVWDSMKTER 304 (340)
Q Consensus 274 ------------~~~~~s~~~~~l~~g~-------------------------------------~d~~i~iw~~~~~~~ 304 (340)
..++|+|+..++.+.. .++.+..||..+++.
T Consensus 377 ~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~ 456 (571)
T 2ad6_A 377 NICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKA 456 (571)
T ss_dssp EESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCE
T ss_pred EECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCE
Confidence 2467888877776654 347889999888876
Q ss_pred eeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 305 AGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 305 ~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
+-.+.. ...+....+...+..++.++.|+.|+.||
T Consensus 457 ~W~~~~-~~~~~~~~~~t~gg~v~~g~~dg~l~a~D 491 (571)
T 2ad6_A 457 KWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALD 491 (571)
T ss_dssp EEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEE
T ss_pred EEEecC-CCCccceeEEECCCEEEEEcCCCeEEEEE
Confidence 554432 22232222233455677788999998875
No 243
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.96 E-value=1.2e-07 Score=86.70 Aligned_cols=219 Identities=13% Similarity=0.090 Sum_probs=139.1
Q ss_pred CCCEEEEEeCC-CeEEEEEccCCCCceEEEEeecCCCcceEEEEE---cCCCeEEEEe------------------CCCe
Q psy15421 108 SGSFVACGGLD-NICSIYSLKTREGNVRVSRELPGHTGYLSCCRF---LDDNQIVTSS------------------GDMS 165 (340)
Q Consensus 108 ~~~~l~~~~~d-~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~l~~~~------------------~d~~ 165 (340)
||++++....+ +.|.+.|+.+.+... +. +++.-.+ ...+.+ .+.+++++++ .++.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~-ii-~ip~g~~-phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDA-IL-EIPNAKG-IHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEE-EE-ECSSCCS-EEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEee-EE-eCCCCCC-CcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 78888776654 568888887653211 11 3443222 334444 2345555553 2457
Q ss_pred EEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCCC--------------------------------------c
Q psy15421 166 CALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDA--------------------------------------S 207 (340)
Q Consensus 166 v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg--------------------------------------~ 207 (340)
+.+.|..+++....+.--. ..-.++++|+++++++.+.+. .
T Consensus 177 vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 9999999988777665322 456778999999888777543 4
Q ss_pred EEEEECCC--Cee-eeEecCCCCCeEEEEEecCCCEEEE-EeCCCcEEEEeCcCCcEE---------EEeecCCcccceE
Q psy15421 208 AKLWDIRD--GSC-KQTFPGHESDINAVTFFPNGWAFAT-GSDDATCRLFDIRADQEL---------AMYSHDNIICGIT 274 (340)
Q Consensus 208 i~~wd~~~--~~~-~~~~~~h~~~v~~v~~~~~~~~l~s-~s~d~~i~iwd~~~~~~~---------~~~~~~~~~~~i~ 274 (340)
|.+.|.++ ++. +..++. .....++.++|||++++. +..+.+|.++|+.+.+.. ..........+..
T Consensus 256 V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~ 334 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPL 334 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEE
T ss_pred EEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcc
Confidence 67777776 433 334431 223457999999997655 456889999999854210 0011122334578
Q ss_pred EEEEcCCCcEEEEEeCCCcEEEEeCCC----------ceeeeeeccCCcce-----EEEEECCCCCEEEEee
Q psy15421 275 SVAFSRSGRLLLAGYDDFNCNVWDSMK----------TERAGILAGHDNRV-----SCLGVTEDGMAVATGS 331 (340)
Q Consensus 275 ~~~~s~~~~~l~~g~~d~~i~iw~~~~----------~~~~~~~~~h~~~i-----~~~~~s~d~~~l~s~s 331 (340)
.++|+|+|...++-.-|+.|..|+..+ .+.+..+.-|-.+- ....++|||++|+++-
T Consensus 335 h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 335 HTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred eEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcC
Confidence 899999995556677899999999765 44555555554321 2335689999998754
No 244
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.94 E-value=2.7e-06 Score=73.17 Aligned_cols=241 Identities=9% Similarity=0.030 Sum_probs=141.5
Q ss_pred cCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeC--------------------CCCcEEEEEECC-CCC
Q psy15421 52 RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPL--------------------RSSWVMTCAYAP-SGS 110 (340)
Q Consensus 52 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~--------------------~~~~i~~v~~~~-~~~ 110 (340)
.+....-.+++|+++++.+.++..++.|..||..+++.. .+.. ....+..+++.+ +++
T Consensus 15 ~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~ 93 (322)
T 2fp8_A 15 EAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ 93 (322)
T ss_dssp ECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE
T ss_pred CCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc
Confidence 333334567889999987888888999999987765432 2210 012467889997 565
Q ss_pred EEEEEeCCCeEEEEEccCCCCceEEEE-eecCC-CcceEEEEEcC-CCeEEEEeC------------------CCeEEEE
Q psy15421 111 FVACGGLDNICSIYSLKTREGNVRVSR-ELPGH-TGYLSCCRFLD-DNQIVTSSG------------------DMSCALW 169 (340)
Q Consensus 111 ~l~~~~~d~~v~i~~~~~~~~~~~~~~-~~~~~-~~~v~~~~~~~-~~~l~~~~~------------------d~~v~iw 169 (340)
++ .+...+.+..++...+. ..... ...+. ......+...+ ++.+..+.. ++.|..+
T Consensus 94 l~-v~d~~~~i~~~d~~~g~--~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 170 (322)
T 2fp8_A 94 LY-IVDCYYHLSVVGSEGGH--ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY 170 (322)
T ss_dssp EE-EEETTTEEEEECTTCEE--CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred EE-EEECCCCEEEEeCCCCE--EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEE
Confidence 44 45445556777654321 11111 11111 12344566666 665444332 3668888
Q ss_pred ECCCCceEEEEecCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEECCCCe--eeeEecCCCCCeEEEEEecCCCEEEEEeC
Q psy15421 170 DIETGQQCASFIGHTGDVMSLSLAPDMRTFV-SGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFPNGWAFATGSD 246 (340)
Q Consensus 170 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-sg~~dg~i~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~ 246 (340)
|..+++... +.........++++|+++.++ +-...+.|..|++.... ....+....+ ...++++++|.++++...
T Consensus 171 d~~~~~~~~-~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 171 DPSTKETTL-LLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp ETTTTEEEE-EEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEE
T ss_pred eCCCCEEEE-eccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecC
Confidence 887665322 222223456799999998555 44567899999987421 1112211223 778999999987777654
Q ss_pred ----------CCcEEEEeCcCCcEEEEeecCC-c-ccceEEEEEcCCCcEEEEEeCCCcEEEEeCC
Q psy15421 247 ----------DATCRLFDIRADQELAMYSHDN-I-ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 300 (340)
Q Consensus 247 ----------d~~i~iwd~~~~~~~~~~~~~~-~-~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~ 300 (340)
.+.|..+|.. ++.+..+.... . ...++.+++ .+++++++...++.|..++..
T Consensus 249 ~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 249 ELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp ETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC-
T ss_pred cccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecc
Confidence 4667888764 44444443221 1 223556666 466777766677888888753
No 245
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.91 E-value=1.1e-06 Score=81.93 Aligned_cols=196 Identities=12% Similarity=0.050 Sum_probs=122.6
Q ss_pred CCeEEEEeC-CCeEEEEeC-CCCCeeEEeeCCCCc-----------EEEEEECCCCCE----EEEEeCCCeEEEEEccCC
Q psy15421 67 SRNLVSASQ-DGKLIVWDS-YTTNKVHAIPLRSSW-----------VMTCAYAPSGSF----VACGGLDNICSIYSLKTR 129 (340)
Q Consensus 67 ~~~l~s~~~-d~~i~iwd~-~~~~~~~~~~~~~~~-----------i~~v~~~~~~~~----l~~~~~d~~v~i~~~~~~ 129 (340)
+..+..++. ++.|.-+|. .+++.+......... ...++++|.+.. ++.++.|+.+..+|..++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 445666777 899999999 899988766543211 112345433333 777888998888888776
Q ss_pred CCceEEEEeecCCCc--ceEEEEEcCCCeEEEEe------CCCeEEEEECCCCceEEEEecCCCC---------------
Q psy15421 130 EGNVRVSRELPGHTG--YLSCCRFLDDNQIVTSS------GDMSCALWDIETGQQCASFIGHTGD--------------- 186 (340)
Q Consensus 130 ~~~~~~~~~~~~~~~--~v~~~~~~~~~~l~~~~------~d~~v~iwd~~~~~~~~~~~~~~~~--------------- 186 (340)
+... ......+.. .+.......++.++.++ .++.|..+|.++|+.+-++......
T Consensus 142 ~~~W--~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVW--KVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEE--EEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEE--eecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 5333 333222110 11110001245666554 3799999999999988766532111
Q ss_pred ----------------------e-EEEEEcCCCCEEEEEeCC----------------CcEEEEECCCCeeeeEecC--C
Q psy15421 187 ----------------------V-MSLSLAPDMRTFVSGACD----------------ASAKLWDIRDGSCKQTFPG--H 225 (340)
Q Consensus 187 ----------------------v-~~~~~~~~~~~~~sg~~d----------------g~i~~wd~~~~~~~~~~~~--h 225 (340)
+ ..+++.+....++.+..+ +.|.-+|.++|+.+-.++. |
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~ 299 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPH 299 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTT
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCC
Confidence 0 134566777777777665 3899999999988766553 2
Q ss_pred C--------CCeEEEEEe-cCC---CEEEEEeCCCcEEEEeCcCCcEEEEee
Q psy15421 226 E--------SDINAVTFF-PNG---WAFATGSDDATCRLFDIRADQELAMYS 265 (340)
Q Consensus 226 ~--------~~v~~v~~~-~~~---~~l~s~s~d~~i~iwd~~~~~~~~~~~ 265 (340)
. .++. +... .+| ..++.++.+|.++.+|..+++.+....
T Consensus 300 d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 300 DEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp CSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 1 1221 2222 467 567788999999999999988876553
No 246
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.90 E-value=9.6e-07 Score=72.47 Aligned_cols=184 Identities=9% Similarity=0.047 Sum_probs=123.0
Q ss_pred CcceEEEEEcCCCeEEEEeCCC--eEEEEECCCCceEEEEecCCCCeEEEEEcCCCCE-EEEEeCCCcEEEEECCCCeee
Q psy15421 143 TGYLSCCRFLDDNQIVTSSGDM--SCALWDIETGQQCASFIGHTGDVMSLSLAPDMRT-FVSGACDASAKLWDIRDGSCK 219 (340)
Q Consensus 143 ~~~v~~~~~~~~~~l~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~sg~~dg~i~~wd~~~~~~~ 219 (340)
..+...+.|.++..+.+++.++ .|+.+|+.+++....+.-. .......+.+++.. ++..-.++.+.+||.++.+.+
T Consensus 42 ~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 42 KAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQV 120 (262)
T ss_dssp TCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEE
T ss_pred CcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEE
Confidence 3455677777433344555454 8999999999988776543 33333333333444 445557999999999999988
Q ss_pred eEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecC---CcccceEEEEEcCCCcEEEEEeCCCcEEE
Q psy15421 220 QTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD---NIICGITSVAFSRSGRLLLAGYDDFNCNV 296 (340)
Q Consensus 220 ~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~~g~~d~~i~i 296 (340)
.+++... .-.. +.+++..|+.+..+..|.++|..+.+.+...... .....++.+.|. +|++.+..-.+..|.+
T Consensus 121 ~ti~~~~-eG~g--lt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~v 196 (262)
T 3nol_A 121 RSFNYDG-EGWG--LTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVR 196 (262)
T ss_dssp EEEECSS-CCCC--EEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEE
T ss_pred EEEECCC-CceE--EecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEE
Confidence 8886422 2223 3456666666666788999999887776655431 111235567776 7777766667889999
Q ss_pred EeCCCceeeeeeccC------------CcceEEEEECCCCCEEEEee
Q psy15421 297 WDSMKTERAGILAGH------------DNRVSCLGVTEDGMAVATGS 331 (340)
Q Consensus 297 w~~~~~~~~~~~~~h------------~~~i~~~~~s~d~~~l~s~s 331 (340)
.|..+++.+..+.-. .+-.+.+||+|++..|+..+
T Consensus 197 IDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 197 IDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp ECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred EECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 999999887765321 13458999999988776655
No 247
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.89 E-value=5.3e-07 Score=74.02 Aligned_cols=181 Identities=7% Similarity=0.016 Sum_probs=124.6
Q ss_pred cceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEE--EEEcCCCCEEEEEeCCCcEEEEECCCCeeeeE
Q psy15421 144 GYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMS--LSLAPDMRTFVSGACDASAKLWDIRDGSCKQT 221 (340)
Q Consensus 144 ~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~--~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~ 221 (340)
.+...+.|..+..+.+.+.++.|+.+|+++++.+..+ ....... +++.. .++++..-.++.+.+||.++.+.+.+
T Consensus 55 ~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 55 AFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp CCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred cccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEE
Confidence 4556777765445666777889999999999987776 2233333 55443 34555566799999999999999888
Q ss_pred ecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCC---cccceEEEEEcCCCcEEEEEeCCCcEEEEe
Q psy15421 222 FPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDN---IICGITSVAFSRSGRLLLAGYDDFNCNVWD 298 (340)
Q Consensus 222 ~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~ 298 (340)
++.. ..-..++ +++..|+.+..++.|.++|..+.+.+....... ....++.+.|. +|++.+..-.+..|.+.|
T Consensus 132 i~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vID 207 (268)
T 3nok_A 132 TRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEID 207 (268)
T ss_dssp EECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEEC
T ss_pred EeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEe
Confidence 8742 2223444 567777777678999999998887766553211 12235667777 777666665778999999
Q ss_pred CCCceeeeeeccC-------------CcceEEEEECCCCCEEEEee
Q psy15421 299 SMKTERAGILAGH-------------DNRVSCLGVTEDGMAVATGS 331 (340)
Q Consensus 299 ~~~~~~~~~~~~h-------------~~~i~~~~~s~d~~~l~s~s 331 (340)
..+++.+..+.-. .+-.+.+|++|++..|+..+
T Consensus 208 p~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 208 PATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 9999887654311 13468999999876555544
No 248
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.88 E-value=1.2e-05 Score=68.57 Aligned_cols=237 Identities=14% Similarity=0.070 Sum_probs=138.6
Q ss_pred EEeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCC--eEEE
Q psy15421 46 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDN--ICSI 123 (340)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~--~v~i 123 (340)
+....|... .....++|+++++++++-..++.|..||... +....... ......+++.++++++++....+ .+..
T Consensus 23 ~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~-~~~p~gia~~~dG~l~vad~~~~~~~v~~ 99 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATV-EGKVSGLAFTSNGDLVATGWNADSIPVVS 99 (306)
T ss_dssp EEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEEC-SSEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred eEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeC-CCCceeEEEcCCCcEEEEeccCCcceEEE
Confidence 334445332 4567899999999888777889999999765 33333322 34578899999999766554332 3444
Q ss_pred EEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEe-CCCeEEEEECCCCce-EEEEe---------cCCCCeEEEEE
Q psy15421 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSS-GDMSCALWDIETGQQ-CASFI---------GHTGDVMSLSL 192 (340)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~-~~~~~---------~~~~~v~~~~~ 192 (340)
++..+ +........+. ..........+++.++.+. .++.|..+|..+++. +.... ..-.....+
T Consensus 100 ~d~~~--g~~~~~~~~~~-~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi-- 174 (306)
T 2p4o_A 100 LVKSD--GTVETLLTLPD-AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL-- 174 (306)
T ss_dssp EECTT--SCEEEEEECTT-CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--
T ss_pred EcCCC--CeEEEEEeCCC-ccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--
Confidence 55433 33332222221 1222333333455544443 588888888875431 21111 011234455
Q ss_pred cCCCCEE-EEEeCCCcEEEEECCC-Cee--eeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCC
Q psy15421 193 APDMRTF-VSGACDASAKLWDIRD-GSC--KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDN 268 (340)
Q Consensus 193 ~~~~~~~-~sg~~dg~i~~wd~~~-~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~ 268 (340)
+|+++.+ ++-...+.|..+++.. +.. ...+.. ......++++++|..+++....+.|.++|.. ++.........
T Consensus 175 s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~ 252 (306)
T 2p4o_A 175 KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQ 252 (306)
T ss_dssp EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGG
T ss_pred CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeeccc
Confidence 7787655 4555678999999864 321 111211 1234568999999988888888899999975 33322111111
Q ss_pred cccceEEEEEc---CCCcEEEEEeCCC
Q psy15421 269 IICGITSVAFS---RSGRLLLAGYDDF 292 (340)
Q Consensus 269 ~~~~i~~~~~s---~~~~~l~~g~~d~ 292 (340)
....+++++|. |+++.|.+....+
T Consensus 253 ~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 253 GVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp TCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred ccCCceEEEEecccCCCCEEEEECCCC
Confidence 12347899998 8887777665543
No 249
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.86 E-value=2.7e-06 Score=69.82 Aligned_cols=185 Identities=14% Similarity=0.123 Sum_probs=123.1
Q ss_pred cEEEEEECCCCCEEEEEeCCC--eEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCce
Q psy15421 99 WVMTCAYAPSGSFVACGGLDN--ICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQ 176 (340)
Q Consensus 99 ~i~~v~~~~~~~~l~~~~~d~--~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~ 176 (340)
....+.|+ ++.++.+.+.++ .|+++|+.+++... ...++.. .+-..+....+..+++.-.++.+.++|..+.+.
T Consensus 44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~--~~~l~~~-~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~ 119 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQ--QIELGKR-YFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQ 119 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEE--EEECCTT-CCEEEEEEETTEEEEEESSSSEEEEEETTTCCE
T ss_pred ccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEE--EEecCCc-cceeEEEEeCCEEEEEEeeCCEEEEEECccCcE
Confidence 34677888 677777777766 89999988764221 1222221 111223333333344445589999999999998
Q ss_pred EEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEecCC--C---CCeEEEEEecCCCEEEEEeCCCcEE
Q psy15421 177 CASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGH--E---SDINAVTFFPNGWAFATGSDDATCR 251 (340)
Q Consensus 177 ~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h--~---~~v~~v~~~~~~~~l~s~s~d~~i~ 251 (340)
+.++.... .-..+ +++++.++....++.|.++|..+.+....++-. . ..++.+.|. +|+.++....+..|.
T Consensus 120 ~~ti~~~~-eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~ 195 (262)
T 3nol_A 120 VRSFNYDG-EGWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIV 195 (262)
T ss_dssp EEEEECSS-CCCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEE
T ss_pred EEEEECCC-CceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEE
Confidence 88876432 22333 356676666666888999999998877665431 1 335667776 787777777789999
Q ss_pred EEeCcCCcEEEEeecCCc----------ccceEEEEEcCCCcEEEEEeCC
Q psy15421 252 LFDIRADQELAMYSHDNI----------ICGITSVAFSRSGRLLLAGYDD 291 (340)
Q Consensus 252 iwd~~~~~~~~~~~~~~~----------~~~i~~~~~s~~~~~l~~g~~d 291 (340)
+.|..+++.+..+..... ..-.+.++|+|+++.|.+.+..
T Consensus 196 vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 196 RIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred EEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 999999988776643221 1246899999998887776654
No 250
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.85 E-value=9.8e-05 Score=71.56 Aligned_cols=270 Identities=11% Similarity=0.056 Sum_probs=169.9
Q ss_pred cCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEee-------CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEcc
Q psy15421 55 LAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIP-------LRSSWVMTCAYAPSGSFVACGGLDNICSIYSLK 127 (340)
Q Consensus 55 ~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-------~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~ 127 (340)
...|.++...+++.+.+ +..++-+.+||..+++...... .....|.++...++|.+.+.. .+| +.+|+..
T Consensus 214 ~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~~G-l~~~~~~ 290 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGT-FND-LNIYHEG 290 (795)
T ss_dssp CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEE-SSC-EEEEETT
T ss_pred CCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEe-CCh-hheEcCC
Confidence 45688888877776555 4444458889977654332211 123568899888888876644 444 6778765
Q ss_pred CCCCceEEEEeec-----CCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEec-------CCCCeEEEEEcCC
Q psy15421 128 TREGNVRVSRELP-----GHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIG-------HTGDVMSLSLAPD 195 (340)
Q Consensus 128 ~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-------~~~~v~~~~~~~~ 195 (340)
++. .......+ -....|.++...+++.+-.|+.++-|..++..+++. ..+.. ....|.++...++
T Consensus 291 ~~~--~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~l~~~~V~~i~~d~~ 367 (795)
T 4a2l_A 291 TDS--FASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRF-KNIRNIPYKNSLSDNVVSCIVEDKD 367 (795)
T ss_dssp TTE--EEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSS-EEECCCTTSSSCSCSSEEEEEECTT
T ss_pred CCe--EEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccc-eEEcCCCCCCCCCCCeeEEEEECCC
Confidence 431 11111000 123457777666677787888888889998765432 22211 2345889998888
Q ss_pred CCEEEEEeCCCcEEEEECCCCeeeeEecC--------CCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecC
Q psy15421 196 MRTFVSGACDASAKLWDIRDGSCKQTFPG--------HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD 267 (340)
Q Consensus 196 ~~~~~sg~~dg~i~~wd~~~~~~~~~~~~--------h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~ 267 (340)
+.+. .|..++-|..||..++........ ....|.++...+++..+..|+.++-|..||..+++... +...
T Consensus 368 g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~-~~~~ 445 (795)
T 4a2l_A 368 KNLW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVEN-FNQR 445 (795)
T ss_dssp SCEE-EEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEE-ECTT
T ss_pred CCEE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEE-eecC
Confidence 8755 477777899999877654332111 13568899988888756677777789999987655332 2211
Q ss_pred ---CcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeec------cCCcceEEEEECCCCCEEEEeeCCCc
Q psy15421 268 ---NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA------GHDNRVSCLGVTEDGMAVATGSWDSF 335 (340)
Q Consensus 268 ---~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~------~h~~~i~~~~~s~d~~~l~s~s~D~~ 335 (340)
.....|.++...++|.+.+.. .+| +.+|+..+.+...... -....|.++...++|...+... +|.
T Consensus 446 ~~~l~~~~v~~i~~d~~g~lwigt-~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl 519 (795)
T 4a2l_A 446 NSQLVNENVYAILPDGEGNLWLGT-LSA-LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGL 519 (795)
T ss_dssp TSCCSCSCEEEEEECSSSCEEEEE-SSC-EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCE
T ss_pred CCCcCCCeeEEEEECCCCCEEEEe-cCc-eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-Cce
Confidence 112358888888888866554 444 8889876654432211 1236799999999998766554 553
No 251
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.83 E-value=7.7e-07 Score=84.44 Aligned_cols=260 Identities=14% Similarity=0.101 Sum_probs=155.0
Q ss_pred CCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCC-cEEEEEECC--CCCEEEEEeC------CCeEEEEEccCCCCceEEEE
Q psy15421 67 SRNLVSASQDGKLIVWDSYTTNKVHAIPLRSS-WVMTCAYAP--SGSFVACGGL------DNICSIYSLKTREGNVRVSR 137 (340)
Q Consensus 67 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~i~~v~~~~--~~~~l~~~~~------d~~v~i~~~~~~~~~~~~~~ 137 (340)
+..++.++.|+.|..+|..+++.+........ ....+..+| .+..++.+.. ++.+..+|..+++.......
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 45677888999999999999998877654211 000000111 1334444432 57889999877654333211
Q ss_pred eecCCC----------------------------cceEEEEEcC-CCeEEEEeCCC-------------------eEEEE
Q psy15421 138 ELPGHT----------------------------GYLSCCRFLD-DNQIVTSSGDM-------------------SCALW 169 (340)
Q Consensus 138 ~~~~~~----------------------------~~v~~~~~~~-~~~l~~~~~d~-------------------~v~iw 169 (340)
.++.. .......+.+ .+.+..+..++ .|..+
T Consensus 197 -~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 197 -VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp -SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred -cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 01100 0011233433 35666666555 49999
Q ss_pred ECCCCceEEEEec--CC-------CCeEEEEEcCCCC---EEEEEeCCCcEEEEECCCCeeeeEecCCC-----------
Q psy15421 170 DIETGQQCASFIG--HT-------GDVMSLSLAPDMR---TFVSGACDASAKLWDIRDGSCKQTFPGHE----------- 226 (340)
Q Consensus 170 d~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~~~sg~~dg~i~~wd~~~~~~~~~~~~h~----------- 226 (340)
|+.+|+....+.. |. .+.....+..+++ .++.++.+|.+.++|.++|+.+...+...
T Consensus 276 D~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~ 355 (668)
T 1kv9_A 276 RPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLAT 355 (668)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTT
T ss_pred cCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccccccc
Confidence 9999998877754 22 2233333444665 68889999999999999998763322110
Q ss_pred -CCe------------------------EEEEEecCCCEEEEE------------------------------------e
Q psy15421 227 -SDI------------------------NAVTFFPNGWAFATG------------------------------------S 245 (340)
Q Consensus 227 -~~v------------------------~~v~~~~~~~~l~s~------------------------------------s 245 (340)
.++ ..++++|+...+... .
T Consensus 356 g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~ 435 (668)
T 1kv9_A 356 GRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAV 435 (668)
T ss_dssp CCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGG
T ss_pred CCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCC
Confidence 000 125677765544431 1
Q ss_pred CCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcce-EEEEECCCC
Q psy15421 246 DDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRV-SCLGVTEDG 324 (340)
Q Consensus 246 ~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i-~~~~~s~d~ 324 (340)
.+|.|.-||..+++.+........ .....+...+.++++|+.|+.++.||..+++.+..+.-..... .-+.+..+|
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~~~~---~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G 512 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPYPTH---WNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAG 512 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEESSS---CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETT
T ss_pred ccceEEEEeCCCCcEEEEccCCCC---CcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECC
Confidence 347899999999988776654322 2222344467888899999999999999999887665432211 223344566
Q ss_pred C-EEEEe
Q psy15421 325 M-AVATG 330 (340)
Q Consensus 325 ~-~l~s~ 330 (340)
+ +++.+
T Consensus 513 ~~yva~~ 519 (668)
T 1kv9_A 513 RQYVAIM 519 (668)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 5 44443
No 252
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.83 E-value=7.7e-05 Score=72.29 Aligned_cols=268 Identities=12% Similarity=0.106 Sum_probs=168.7
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEee-------CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccC
Q psy15421 56 AKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIP-------LRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKT 128 (340)
Q Consensus 56 ~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-------~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~ 128 (340)
..|.++...+++.+.+ |..+ -|.+||..+.+...... .....|.++...++|.+.+ |..++-+..++...
T Consensus 263 ~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi-gt~~~Gl~~~~~~~ 339 (795)
T 4a2l_A 263 NYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWL-GTYFGGLNYYHPIR 339 (795)
T ss_dssp SBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEE-EESSSCEEEECGGG
T ss_pred CeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEE-EECCCCeEEeCCCc
Confidence 5699999988887655 4444 58889977654332211 1235689999999888765 55555567777543
Q ss_pred CCCceEEEEeec----CCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEec--------CCCCeEEEEEcCCC
Q psy15421 129 REGNVRVSRELP----GHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIG--------HTGDVMSLSLAPDM 196 (340)
Q Consensus 129 ~~~~~~~~~~~~----~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~--------~~~~v~~~~~~~~~ 196 (340)
.. .......+ -....|.++....++.+-.|+.++-+..|+..+++...-... ....|.++...+++
T Consensus 340 ~~--~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g 417 (795)
T 4a2l_A 340 NR--FKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKK 417 (795)
T ss_dssp GS--SEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTT
T ss_pred cc--ceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCC
Confidence 22 11111111 023357777666667777788887899999877643221111 13468899988888
Q ss_pred CEEEEEeCCCcEEEEECCCCeeeeEec----CCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecC----C
Q psy15421 197 RTFVSGACDASAKLWDIRDGSCKQTFP----GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD----N 268 (340)
Q Consensus 197 ~~~~sg~~dg~i~~wd~~~~~~~~~~~----~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~----~ 268 (340)
+.+..|..++-|..||.++++...... .....|.++...++|...+.. . +-+..||..+.+... +... .
T Consensus 418 ~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~-~~~~~~~~~ 494 (795)
T 4a2l_A 418 SLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTT-IEKEKDGTP 494 (795)
T ss_dssp TEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEE-CCBCTTCCB
T ss_pred CEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEE-ccccccccc
Confidence 845567777779999988776433221 124568999988888755544 4 458889987654322 2211 1
Q ss_pred -cccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeec-------cCCcceEEEEECCCCCEEEEeeCCCcE
Q psy15421 269 -IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA-------GHDNRVSCLGVTEDGMAVATGSWDSFL 336 (340)
Q Consensus 269 -~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~-------~h~~~i~~~~~s~d~~~l~s~s~D~~i 336 (340)
....|.++...++|.+.+... + -+..|+..+... .+. .....|.++...++|.+.++.. +|..
T Consensus 495 ~~~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~Gl~ 565 (795)
T 4a2l_A 495 VVSKQITTLFRDSHKRLWIGGE-E-GLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-EGFY 565 (795)
T ss_dssp CCCCCEEEEEECTTCCEEEEES-S-CEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-SCEE
T ss_pred cCCceEEEEEECCCCCEEEEeC-C-ceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-CCce
Confidence 113588899999988776554 4 488888665543 221 1345799999999998666544 4543
No 253
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.81 E-value=2.6e-06 Score=73.24 Aligned_cols=231 Identities=6% Similarity=-0.025 Sum_probs=141.9
Q ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeec---------C--------CCcceEEEEEcC-CCeEEEEe
Q psy15421 100 VMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELP---------G--------HTGYLSCCRFLD-DNQIVTSS 161 (340)
Q Consensus 100 i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~---------~--------~~~~v~~~~~~~-~~~l~~~~ 161 (340)
...+++.++++++.++..++.|..|+...+. ........ + .......+.+.+ ++.|..+.
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSG--FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTC--EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCc--eEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 3467788899877778888888888765322 21111100 0 012345566664 67777776
Q ss_pred CCCeEEEEECCCCceEEEEec-----CCCCeEEEEEcC-CCCEEEEEeC-----------------CCcEEEEECCCCee
Q psy15421 162 GDMSCALWDIETGQQCASFIG-----HTGDVMSLSLAP-DMRTFVSGAC-----------------DASAKLWDIRDGSC 218 (340)
Q Consensus 162 ~d~~v~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~~~sg~~-----------------dg~i~~wd~~~~~~ 218 (340)
..+.+..+|..+++. ..+.. ....+..+++.| +++++++-.. ++.|..||..+++.
T Consensus 99 ~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp TTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred CCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 666688888775532 22211 113467899999 8987776432 36788889877664
Q ss_pred eeEecCCCCCeEEEEEecCCCEEE-EEeCCCcEEEEeCcCCc--EEEEeecCCcccceEEEEEcCCCcEEEEEeC-----
Q psy15421 219 KQTFPGHESDINAVTFFPNGWAFA-TGSDDATCRLFDIRADQ--ELAMYSHDNIICGITSVAFSRSGRLLLAGYD----- 290 (340)
Q Consensus 219 ~~~~~~h~~~v~~v~~~~~~~~l~-s~s~d~~i~iwd~~~~~--~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~----- 290 (340)
..... .....+.++++|++..+. +-...+.|..|++.... ....+.. ... ...+++.++|++.++...
T Consensus 178 ~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~--~~g-P~gi~~d~~G~l~va~~~~~~~~ 253 (322)
T 2fp8_A 178 TLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK--IPN-PGNIKRNADGHFWVSSSEELDGN 253 (322)
T ss_dssp EEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE--CSS-EEEEEECTTSCEEEEEEEETTSS
T ss_pred EEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe--CCC-CCCeEECCCCCEEEEecCccccc
Confidence 32222 123356799999998554 44567899999987421 1112211 112 677899999997777654
Q ss_pred -----CCcEEEEeCCCceeeeeeccC----CcceEEEEECCCCCEEEEeeCCCcEEec
Q psy15421 291 -----DFNCNVWDSMKTERAGILAGH----DNRVSCLGVTEDGMAVATGSWDSFLRIW 339 (340)
Q Consensus 291 -----d~~i~iw~~~~~~~~~~~~~h----~~~i~~~~~s~d~~~l~s~s~D~~i~iW 339 (340)
.+.|..++. .++.+..+... ...++++++ .++.++++...++.|.++
T Consensus 254 ~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~ 309 (322)
T 2fp8_A 254 MHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGIL 309 (322)
T ss_dssp TTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEE
T ss_pred ccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEE
Confidence 466888884 46655555432 245677776 467666766667777654
No 254
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.81 E-value=4.7e-05 Score=65.58 Aligned_cols=271 Identities=9% Similarity=-0.001 Sum_probs=144.9
Q ss_pred cCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEee----CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCC
Q psy15421 55 LAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIP----LRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTRE 130 (340)
Q Consensus 55 ~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~----~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~ 130 (340)
...+.++.|.+++..++ ++.+|.|. .....++.-.... .....+..+.|.+ +..++ ++..+.+ +....+.
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i--~~S~DgG 108 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIM--LHTTDGG 108 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEE--EEESSTT
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeE--EEECCCC
Confidence 35799999987777666 56777653 3333333212211 1234678888876 44444 4556643 3322222
Q ss_pred CceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeE-EEEECCCCceEEE-EecCCCCeEEEEEcCCCCEEEEEeCCCcE
Q psy15421 131 GNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSC-ALWDIETGQQCAS-FIGHTGDVMSLSLAPDMRTFVSGACDASA 208 (340)
Q Consensus 131 ~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v-~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~sg~~dg~i 208 (340)
...........+...+..+.+.+++.++.++.++.| +-.| .++.-.. .......+..+++.|++.+++.+...+..
T Consensus 109 ~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S~D--gG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~ 186 (327)
T 2xbg_A 109 QSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKD--SGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFY 186 (327)
T ss_dssp SSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEESS--TTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEE
T ss_pred CCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEEcC--CCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEE
Confidence 222222111122233455555455565555556543 2233 2322211 22345578899999988877666444433
Q ss_pred EEEEC--CCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecC--CcccceEEEEEcCCCcE
Q psy15421 209 KLWDI--RDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD--NIICGITSVAFSRSGRL 284 (340)
Q Consensus 209 ~~wd~--~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~--~~~~~i~~~~~s~~~~~ 284 (340)
+-+|- .+-+.+. ......+..+.+.+++..++ ++.+|.+++.+...++.-...... .....+..+++.|++.+
T Consensus 187 ~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~ 263 (327)
T 2xbg_A 187 STWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEV 263 (327)
T ss_dssp EEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCE
T ss_pred EEeCCCCCceeECC--CCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEE
Confidence 44442 2222221 23456788999999887654 456788877642222222111111 11124788999988887
Q ss_pred EEEEeCCCcEEEEeCCCceeeeeec---cCCcceEEEEECCCCCEEEEeeCCCcEEec
Q psy15421 285 LLAGYDDFNCNVWDSMKTERAGILA---GHDNRVSCLGVTEDGMAVATGSWDSFLRIW 339 (340)
Q Consensus 285 l~~g~~d~~i~iw~~~~~~~~~~~~---~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW 339 (340)
++++. ++.+. +....++.-..+. .+...++++.|.+++. ++.++.+|.|.-+
T Consensus 264 ~~~g~-~g~i~-~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~ 318 (327)
T 2xbg_A 264 WLAGG-AGALL-CSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRY 318 (327)
T ss_dssp EEEES-TTCEE-EESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEE
T ss_pred EEEeC-CCeEE-EeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEE
Confidence 77765 56663 3333333333232 2346678888876655 5566678887654
No 255
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.81 E-value=2.9e-05 Score=64.65 Aligned_cols=220 Identities=8% Similarity=-0.028 Sum_probs=133.7
Q ss_pred CcEEEEEEcCCCCe-EEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEE-EeCCCeEEEEEccCCCCce
Q psy15421 56 AKIYAMHWGSDSRN-LVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVAC-GGLDNICSIYSLKTREGNV 133 (340)
Q Consensus 56 ~~v~~~~~s~~~~~-l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~-~~~d~~v~i~~~~~~~~~~ 133 (340)
.....++|++++.. +++-...+.|..++.........+.........+++++++..++. -...+.|.++++.....
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-- 113 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-- 113 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE--
Confidence 35678999986554 555566789999998765443333333345788999997655544 44567888888753221
Q ss_pred EEEEeecCCCcceEEEEEcC-CCeEEEEeC---CCeEEEEECCCCceEEEEe-cCCCCeEEEEEcCCCCEE-EEEeCCCc
Q psy15421 134 RVSRELPGHTGYLSCCRFLD-DNQIVTSSG---DMSCALWDIETGQQCASFI-GHTGDVMSLSLAPDMRTF-VSGACDAS 207 (340)
Q Consensus 134 ~~~~~~~~~~~~v~~~~~~~-~~~l~~~~~---d~~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~-~sg~~dg~ 207 (340)
... .......-..+.+.+ ++.+..+.. .+.|..+++.... ...+. ........++++|++..+ ++-...+.
T Consensus 114 ~~~--~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~ 190 (267)
T 1npe_A 114 RVL--FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR 190 (267)
T ss_dssp EEE--ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred EEE--EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCE
Confidence 111 111112334566665 466544443 3678888876432 22222 223457899999986655 45556789
Q ss_pred EEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCc
Q psy15421 208 AKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGR 283 (340)
Q Consensus 208 i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 283 (340)
|..+|.........+.+ ......+++. .+..+++....+.|..+|..+++.+..+.... ......+++.|++.
T Consensus 191 I~~~~~~g~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~-~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 191 AECLNPAQPGRRKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHK-QTRLYGITIALSQC 263 (267)
T ss_dssp EEEEETTEEEEEEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSS-CCCCCCEEEECSCC
T ss_pred EEEEecCCCceEEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEcccc-ccccceeeecCccC
Confidence 99999875443333332 2334567765 45556666667899999998877766654322 11255677777764
No 256
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.80 E-value=1.8e-05 Score=64.29 Aligned_cols=190 Identities=12% Similarity=0.014 Sum_probs=124.6
Q ss_pred EeEEecCccC--cEEEEEEcCCCCeEEEEeCCC--eEEEEeCCCCCeeEEeeCCCCcE-EEEEECCCCCEEEEEeCCCeE
Q psy15421 47 TRRTLRGHLA--KIYAMHWGSDSRNLVSASQDG--KLIVWDSYTTNKVHAIPLRSSWV-MTCAYAPSGSFVACGGLDNIC 121 (340)
Q Consensus 47 ~~~~~~~h~~--~v~~~~~s~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~i-~~v~~~~~~~~l~~~~~d~~v 121 (340)
..+++ -|.. -...+.|+. +.++.|.+.+| .|+..|+.+++.+..+....... -.+++. +++..+..-.++.+
T Consensus 11 v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v 87 (243)
T 3mbr_X 11 VVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEG 87 (243)
T ss_dssp EEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEE
T ss_pred EEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEE
Confidence 33444 4543 356899986 66777877764 89999999999988887654321 223333 23444445567899
Q ss_pred EEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCC-----CCeEEEEEcCCC
Q psy15421 122 SIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHT-----GDVMSLSLAPDM 196 (340)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~ 196 (340)
.+||..+.. ...+++..... ..+.+ +++.|+.+.+++.|.++|..+.+...++.... ..++.+.+. ++
T Consensus 88 ~v~D~~tl~----~~~ti~~~~~G-wglt~-dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G 160 (243)
T 3mbr_X 88 FVYDLATLT----PRARFRYPGEG-WALTS-DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NG 160 (243)
T ss_dssp EEEETTTTE----EEEEEECSSCC-CEEEE-CSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred EEEECCcCc----EEEEEeCCCCc-eEEee-CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CC
Confidence 999987653 33333321111 22333 45566666678999999999988877765421 235566665 66
Q ss_pred CEEEEEeCCCcEEEEECCCCeeeeEecC-------------CCCCeEEEEEecCCCEEEEEeC
Q psy15421 197 RTFVSGACDASAKLWDIRDGSCKQTFPG-------------HESDINAVTFFPNGWAFATGSD 246 (340)
Q Consensus 197 ~~~~sg~~dg~i~~wd~~~~~~~~~~~~-------------h~~~v~~v~~~~~~~~l~s~s~ 246 (340)
+.++....+..|.+.|.++++.+..+.- ...-.+.|+++|++..|...+.
T Consensus 161 ~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 161 ELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 6666666788999999999998776541 1135689999998766665554
No 257
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.80 E-value=1e-05 Score=65.76 Aligned_cols=192 Identities=11% Similarity=0.053 Sum_probs=124.6
Q ss_pred EEEeecC-CCcceEEEEEcCCCeEEEEeCC--CeEEEEECCCCceEEEEecCCCC-eEEEEEcCCCCEEEEEeCCCcEEE
Q psy15421 135 VSRELPG-HTGYLSCCRFLDDNQIVTSSGD--MSCALWDIETGQQCASFIGHTGD-VMSLSLAPDMRTFVSGACDASAKL 210 (340)
Q Consensus 135 ~~~~~~~-~~~~v~~~~~~~~~~l~~~~~d--~~v~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~sg~~dg~i~~ 210 (340)
+..+.+. ...+...+.|.++..+.+.+.+ +.|+.+|+.+++....+.-.... --.+++.. +++++..-.++.+.+
T Consensus 11 v~~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw~~~~v~v 89 (243)
T 3mbr_X 11 VVKRYPHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTWRNHEGFV 89 (243)
T ss_dssp EEEEEECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEEEE
T ss_pred EEEEcCCCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEeeCCEEEE
Confidence 3444432 2345667777664334444443 58999999999988776533221 12334432 344555667999999
Q ss_pred EECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCC---cccceEEEEEcCCCcEEEE
Q psy15421 211 WDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDN---IICGITSVAFSRSGRLLLA 287 (340)
Q Consensus 211 wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~ 287 (340)
||.++.+.+.+++... .-..++ +++..|..+..++.|.++|..+.+.+....... ....++.+.+. +|+.++.
T Consensus 90 ~D~~tl~~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyan 165 (243)
T 3mbr_X 90 YDLATLTPRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLAN 165 (243)
T ss_dssp EETTTTEEEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEE
T ss_pred EECCcCcEEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEE
Confidence 9999999988887432 223444 566666666668899999998877766553211 11235566665 6776666
Q ss_pred EeCCCcEEEEeCCCceeeeeecc-------------CCcceEEEEECCCCCEEEEee
Q psy15421 288 GYDDFNCNVWDSMKTERAGILAG-------------HDNRVSCLGVTEDGMAVATGS 331 (340)
Q Consensus 288 g~~d~~i~iw~~~~~~~~~~~~~-------------h~~~i~~~~~s~d~~~l~s~s 331 (340)
.-.+..|.+.|..+++.+..+.- -.+-.+.++++|++..|+..+
T Consensus 166 vw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 166 VWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp ETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred ECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 65677899999999988776431 113468999999887666555
No 258
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.80 E-value=2.5e-05 Score=66.53 Aligned_cols=223 Identities=12% Similarity=0.046 Sum_probs=132.1
Q ss_pred CcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEe-C-CC-eEEEEECCCC
Q psy15421 98 SWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSS-G-DM-SCALWDIETG 174 (340)
Q Consensus 98 ~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~-~-d~-~v~iwd~~~~ 174 (340)
.....++++++++++++-..++.|..++... ........ ......+.+.+++.++.+. . ++ .|..+|..++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g---~~~~~~~~---~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g 105 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG---NQQIHATV---EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDG 105 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC---CEEEEEEC---SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTS
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC---ceEEEEeC---CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCC
Confidence 4567889999998777766778888887643 22211222 2345567777666555444 2 22 4667777777
Q ss_pred ceEEEEe-cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCee-eeEe---------cCCCCCeEEEEEecCCCE-EE
Q psy15421 175 QQCASFI-GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC-KQTF---------PGHESDINAVTFFPNGWA-FA 242 (340)
Q Consensus 175 ~~~~~~~-~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~-~~~~---------~~h~~~v~~v~~~~~~~~-l~ 242 (340)
+...... ........++..+++..+++-..++.|..+|...++. +... .+.....+.+ +|++.. ++
T Consensus 106 ~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv 183 (306)
T 2p4o_A 106 TVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYV 183 (306)
T ss_dssp CEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEE
T ss_pred eEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEE
Confidence 6432221 1122334555555555555555689999999876531 1100 0111235566 787764 45
Q ss_pred EEeCCCcEEEEeCcC-CcE--EEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeee--eeccCCcceEE
Q psy15421 243 TGSDDATCRLFDIRA-DQE--LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG--ILAGHDNRVSC 317 (340)
Q Consensus 243 s~s~d~~i~iwd~~~-~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~--~~~~h~~~i~~ 317 (340)
+-...+.|..+++.. ++. ...+... .....++++++|+++++-...+.|.+++.. ++... .+.......++
T Consensus 184 ~d~~~~~I~~~~~~~~g~~~~~~~~~~~---~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~ 259 (306)
T 2p4o_A 184 SNTEKMLLLRIPVDSTDKPGEPEIFVEQ---TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTA 259 (306)
T ss_dssp EETTTTEEEEEEBCTTSCBCCCEEEEES---CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEE
T ss_pred EeCCCCEEEEEEeCCCCCCCccEEEecc---CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceE
Confidence 556678899999864 211 1111111 124568999999988887778899999854 54422 23333456899
Q ss_pred EEEC---CCCCEEEEeeC
Q psy15421 318 LGVT---EDGMAVATGSW 332 (340)
Q Consensus 318 ~~~s---~d~~~l~s~s~ 332 (340)
++|. ||+..|+.++.
T Consensus 260 ~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 260 VAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EEECCSTTTTTEEEEEEC
T ss_pred EEEecccCCCCEEEEECC
Confidence 9998 88776655443
No 259
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.78 E-value=8.2e-06 Score=75.87 Aligned_cols=256 Identities=13% Similarity=0.065 Sum_probs=151.2
Q ss_pred CCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCC----cEEE-EEECCCCCEEEEEeC------CCeEEEEEccCCCCceEE
Q psy15421 67 SRNLVSASQDGKLIVWDSYTTNKVHAIPLRSS----WVMT-CAYAPSGSFVACGGL------DNICSIYSLKTREGNVRV 135 (340)
Q Consensus 67 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~----~i~~-v~~~~~~~~l~~~~~------d~~v~i~~~~~~~~~~~~ 135 (340)
+..++.++.|+.|..+|..+++.+........ .+.+ -.. .++ .++.+.. ++.+..+|..+++...+.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV-AKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE-ECC-EEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 44677788899999999999998876653220 1110 001 134 4444444 788999998876543332
Q ss_pred EEeecCCC----------------------------------c--ceEEEEEcC-CCeEEEEeCC---------------
Q psy15421 136 SRELPGHT----------------------------------G--YLSCCRFLD-DNQIVTSSGD--------------- 163 (340)
Q Consensus 136 ~~~~~~~~----------------------------------~--~v~~~~~~~-~~~l~~~~~d--------------- 163 (340)
. ..... + ......+.+ .+.+..+..+
T Consensus 193 ~--~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y 270 (571)
T 2ad6_A 193 F--ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKW 270 (571)
T ss_dssp E--SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred c--cCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCcee
Confidence 2 11100 0 000122322 3455444432
Q ss_pred -CeEEEEECCCCceEEEEecC--C-------CCeEEEEEcCCCC---EEEEEeCCCcEEEEECCCCeeeeEecCCC----
Q psy15421 164 -MSCALWDIETGQQCASFIGH--T-------GDVMSLSLAPDMR---TFVSGACDASAKLWDIRDGSCKQTFPGHE---- 226 (340)
Q Consensus 164 -~~v~iwd~~~~~~~~~~~~~--~-------~~v~~~~~~~~~~---~~~sg~~dg~i~~wd~~~~~~~~~~~~h~---- 226 (340)
+.|..+|..+|+....+... . ....-+...++++ .++.++.+|.+..+|.++++.+..++-..
T Consensus 271 ~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w 350 (571)
T 2ad6_A 271 TMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNV 350 (571)
T ss_dssp TTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCS
T ss_pred EEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccc
Confidence 36999999999988776532 1 1122223334664 56778899999999999998765443111
Q ss_pred ---------CCe--------------------------EEEEEecCCCEEEEEe--------------------------
Q psy15421 227 ---------SDI--------------------------NAVTFFPNGWAFATGS-------------------------- 245 (340)
Q Consensus 227 ---------~~v--------------------------~~v~~~~~~~~l~s~s-------------------------- 245 (340)
.++ ..++++|+...+....
T Consensus 351 ~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~ 430 (571)
T 2ad6_A 351 FKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLA 430 (571)
T ss_dssp EEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred cccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccce
Confidence 111 1357777766655543
Q ss_pred -----------CCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcc
Q psy15421 246 -----------DDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNR 314 (340)
Q Consensus 246 -----------~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~ 314 (340)
.++.|..||..+++.+..+..... +....+...+..++.++.|+.++.+|..+++.+-.+.-....
T Consensus 431 ~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~---~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~ 507 (571)
T 2ad6_A 431 MYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFA---AWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGG 507 (571)
T ss_dssp EEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSC---CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC
T ss_pred eccCccccCCCCCCeEEEEECCCCCEEEEecCCCC---ccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCc
Confidence 357899999998888776654322 111122224567777999999999999999887766432211
Q ss_pred -eEEEEECCCCCEEEE
Q psy15421 315 -VSCLGVTEDGMAVAT 329 (340)
Q Consensus 315 -i~~~~~s~d~~~l~s 329 (340)
-..+.+..+|+.++.
T Consensus 508 ~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 508 IGSPMTYSFKGKQYIG 523 (571)
T ss_dssp CSCCEEEEETTEEEEE
T ss_pred EeeeEEEEECCEEEEE
Confidence 122345577765543
No 260
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.78 E-value=6.5e-06 Score=76.68 Aligned_cols=267 Identities=16% Similarity=0.102 Sum_probs=155.6
Q ss_pred CeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcE---------EEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEe
Q psy15421 68 RNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWV---------MTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRE 138 (340)
Q Consensus 68 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i---------~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~ 138 (340)
..++.++.++.|..+|..+++.+.......... ..+++ .+..++.++.++.+..+|..+++... ...
T Consensus 69 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W--~~~ 144 (582)
T 1flg_A 69 GVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVW--KKK 144 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEE--EEE
T ss_pred CEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEe--eec
Confidence 345555554459999999999887765432210 11111 35567778889988888887765433 222
Q ss_pred ecCCCc--ceE--EEEEcC--CC--eEEEEe------CCCeEEEEECCCCceEEEEecCCCC------------------
Q psy15421 139 LPGHTG--YLS--CCRFLD--DN--QIVTSS------GDMSCALWDIETGQQCASFIGHTGD------------------ 186 (340)
Q Consensus 139 ~~~~~~--~v~--~~~~~~--~~--~l~~~~------~d~~v~iwd~~~~~~~~~~~~~~~~------------------ 186 (340)
...+.. .+. -+.... ++ .++.++ .++.|..+|..+|+.+-........
T Consensus 145 ~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~ 224 (582)
T 1flg_A 145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAP 224 (582)
T ss_dssp CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCT
T ss_pred CCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccc
Confidence 222110 010 011111 11 455544 2789999999999887654321100
Q ss_pred -----------------------eEEEEEcCCCCEEEEEeC--------------------C----CcEEEEECCCCeee
Q psy15421 187 -----------------------VMSLSLAPDMRTFVSGAC--------------------D----ASAKLWDIRDGSCK 219 (340)
Q Consensus 187 -----------------------v~~~~~~~~~~~~~sg~~--------------------d----g~i~~wd~~~~~~~ 219 (340)
-..+++.|...+++.+.. | +.|.-+|.++|+.+
T Consensus 225 ~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~ 304 (582)
T 1flg_A 225 SWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVK 304 (582)
T ss_dssp TSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEE
T ss_pred cCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEE
Confidence 013556677677776553 2 68999999999987
Q ss_pred eEecC--CC--------CCeEEEEEe-cCCC---EEEEEeCCCcEEEEeCcCCcEEEEeecCCcc---------------
Q psy15421 220 QTFPG--HE--------SDINAVTFF-PNGW---AFATGSDDATCRLFDIRADQELAMYSHDNII--------------- 270 (340)
Q Consensus 220 ~~~~~--h~--------~~v~~v~~~-~~~~---~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~--------------- 270 (340)
-.++. |. .++. +... .+|+ .++.++.+|.++.+|..+++.+..+......
T Consensus 305 W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~ 383 (582)
T 1flg_A 305 WFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVE 383 (582)
T ss_dssp EEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEE
T ss_pred EEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeE
Confidence 66642 32 1221 2222 4663 7888999999999999988887654322100
Q ss_pred ---------------------cc-------eEEEEEcCCCcEEEEEe---------------------------------
Q psy15421 271 ---------------------CG-------ITSVAFSRSGRLLLAGY--------------------------------- 289 (340)
Q Consensus 271 ---------------------~~-------i~~~~~s~~~~~l~~g~--------------------------------- 289 (340)
++ -..++++|+..++.+..
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~ 463 (582)
T 1flg_A 384 REGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDD 463 (582)
T ss_dssp CTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSS
T ss_pred ccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCC
Confidence 00 01356777655554432
Q ss_pred CCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 290 DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 290 ~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
.++.+..||..+++.+=....+ .++..-.....+.+++.|+.|+.++.+|
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D 513 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFD 513 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEE
T ss_pred CcceEEEEECCCCCEEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEE
Confidence 2578889998888765433222 2222211222455777899999998775
No 261
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.74 E-value=5.9e-06 Score=67.86 Aligned_cols=183 Identities=10% Similarity=-0.004 Sum_probs=124.8
Q ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEE
Q psy15421 99 WVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCA 178 (340)
Q Consensus 99 ~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~ 178 (340)
....+.|+ ++.++.+.+.++.++++|+.+++..... ++.. .+-..+....+..+.+.-.++.+.+||..+.+.+.
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~---l~~~-~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME---RLGN-IFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRER 130 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE---ECTT-CCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEE
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE---CCCC-cceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEE
Confidence 34677777 4667777888889999999876543332 3332 12222444444445555568999999999999888
Q ss_pred EEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEecC--CCC---CeEEEEEecCCCEEEEEeCCCcEEEE
Q psy15421 179 SFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG--HES---DINAVTFFPNGWAFATGSDDATCRLF 253 (340)
Q Consensus 179 ~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~--h~~---~v~~v~~~~~~~~l~s~s~d~~i~iw 253 (340)
++..- ..-..++ ++++.++.+..++.|.++|..+.+.+..++- +.. .++.+.|. +|+.++....+..|.+.
T Consensus 131 ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vI 206 (268)
T 3nok_A 131 TTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEI 206 (268)
T ss_dssp EEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEE
T ss_pred EEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEE
Confidence 87642 3333444 5677777767799999999999887776642 222 35677777 78777777778899999
Q ss_pred eCcCCcEEEEeecCC-----------cccceEEEEEcCCCcEEEEEeC
Q psy15421 254 DIRADQELAMYSHDN-----------IICGITSVAFSRSGRLLLAGYD 290 (340)
Q Consensus 254 d~~~~~~~~~~~~~~-----------~~~~i~~~~~s~~~~~l~~g~~ 290 (340)
|..+++.+..+.... ...-.+.++|+|+++.|++.+.
T Consensus 207 Dp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 207 DPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp CTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred eCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 999988776654321 1124789999998766665544
No 262
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.74 E-value=0.00012 Score=70.73 Aligned_cols=276 Identities=8% Similarity=0.016 Sum_probs=164.1
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEe--------------eCCCCcEEEEEECCCCCEEEEEeCCCeE
Q psy15421 56 AKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAI--------------PLRSSWVMTCAYAPSGSFVACGGLDNIC 121 (340)
Q Consensus 56 ~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~--------------~~~~~~i~~v~~~~~~~~l~~~~~d~~v 121 (340)
..|.++...+++.+.+ |...+-|.++|..+....... ......|.++...++|.+-+ |..++-+
T Consensus 258 ~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWi-gt~~~Gl 335 (781)
T 3v9f_A 258 SYIFSIKQLKDNKLWI-ATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWI-GTWGGGI 335 (781)
T ss_dssp CCEEEEEECTTSEEEE-EESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEE-EEBSSCE
T ss_pred ceEEEEEECCCCCEEE-EeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEE-EecCCeE
Confidence 5688998888776554 555456888887665432111 12345688988888887665 5555556
Q ss_pred EEEEccCCCCceEEEEee-------cCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEE---ecCCCCeEEEE
Q psy15421 122 SIYSLKTREGNVRVSREL-------PGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASF---IGHTGDVMSLS 191 (340)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~---~~~~~~v~~~~ 191 (340)
..++..... ....... ......|.++....++.+-.|+.++-+..+|..+++...-. ......|.++.
T Consensus 336 ~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 413 (781)
T 3v9f_A 336 NFISNAPPT--FHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSL 413 (781)
T ss_dssp EEECSSCCS--CEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEE
T ss_pred EEeCCCCCc--ceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEE
Confidence 777754332 1111100 01234567666666677777776677888988654322110 11235688888
Q ss_pred EcCCCCEEEEEeCCCcEEEEECCCCeeeeEec--CCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecC--
Q psy15421 192 LAPDMRTFVSGACDASAKLWDIRDGSCKQTFP--GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD-- 267 (340)
Q Consensus 192 ~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~-- 267 (340)
..+++.+.+ |..++-+..+|.++++...... .....|.++...+++...+ |+. +-+..+|..+.+........
T Consensus 414 ~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~ 490 (781)
T 3v9f_A 414 KDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNS 490 (781)
T ss_dssp ECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTS
T ss_pred ECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCccc
Confidence 888777655 6666778889987776432221 1345788998888886444 454 56888987765432221111
Q ss_pred -CcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeecc---CCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 268 -NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG---HDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 268 -~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~---h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
.....|.++...++|.+.+....+| +..|+..+.+....... ....|.++...++|.+.++.. +|.|..||
T Consensus 491 ~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d 565 (781)
T 3v9f_A 491 QLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPS 565 (781)
T ss_dssp SCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESC
T ss_pred ccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEEC
Confidence 0123588899999888766443355 77788655443221111 135789999999998666544 66645443
No 263
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.69 E-value=1.9e-05 Score=73.56 Aligned_cols=253 Identities=15% Similarity=0.081 Sum_probs=148.3
Q ss_pred EEEEeCCCeEEEEeCCCCCeeEEeeCCCC----cEEE-EEECCCCCEEEEEe------CCCeEEEEEccCCCCceEEEEe
Q psy15421 70 LVSASQDGKLIVWDSYTTNKVHAIPLRSS----WVMT-CAYAPSGSFVACGG------LDNICSIYSLKTREGNVRVSRE 138 (340)
Q Consensus 70 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~----~i~~-v~~~~~~~~l~~~~------~d~~v~i~~~~~~~~~~~~~~~ 138 (340)
|+.++.|+.|..+|..+++.+........ .+.+ -.. .++ .++.++ .++.++.+|..+++...+..
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~-- 199 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY-- 199 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEE--
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEc--
Confidence 77888999999999999998876554320 1111 001 134 444444 37889999988765443322
Q ss_pred ecCCC----------------------------------c-ce-EEEEEc-CCCeEEEEeCC----------------Ce
Q psy15421 139 LPGHT----------------------------------G-YL-SCCRFL-DDNQIVTSSGD----------------MS 165 (340)
Q Consensus 139 ~~~~~----------------------------------~-~v-~~~~~~-~~~~l~~~~~d----------------~~ 165 (340)
..... + .+ ....+. ..+.+..+..+ ++
T Consensus 200 ~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~s 279 (599)
T 1w6s_A 200 ATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMT 279 (599)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSE
T ss_pred CCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccce
Confidence 11100 0 00 011222 34555555554 48
Q ss_pred EEEEECCCCceEEEEecCCC---------CeEEEEEc-CCC---CEEEEEeCCCcEEEEECCCCeeeeEecCC-------
Q psy15421 166 CALWDIETGQQCASFIGHTG---------DVMSLSLA-PDM---RTFVSGACDASAKLWDIRDGSCKQTFPGH------- 225 (340)
Q Consensus 166 v~iwd~~~~~~~~~~~~~~~---------~v~~~~~~-~~~---~~~~sg~~dg~i~~wd~~~~~~~~~~~~h------- 225 (340)
|..+|..+|+....+..... ...-+... .++ ..++.++.+|.+.++|.++|+.+-..+..
T Consensus 280 v~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~ 359 (599)
T 1w6s_A 280 IFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFK 359 (599)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccc
Confidence 99999999998877654221 11222332 566 46777889999999999999876544311
Q ss_pred ------CCCe--------------------------EEEEEecCCCEEEEE-----------------------------
Q psy15421 226 ------ESDI--------------------------NAVTFFPNGWAFATG----------------------------- 244 (340)
Q Consensus 226 ------~~~v--------------------------~~v~~~~~~~~l~s~----------------------------- 244 (340)
..++ ..++++|+...+.+.
T Consensus 360 ~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 439 (599)
T 1w6s_A 360 SVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMY 439 (599)
T ss_dssp EECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred ccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceec
Confidence 1111 134566654444332
Q ss_pred ----e------CCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCc-
Q psy15421 245 ----S------DDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDN- 313 (340)
Q Consensus 245 ----s------~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~- 313 (340)
+ .+|.+.-||..+++.+........ ...-.....+.+++.|+.|+.++.||..+++.+-.+.-...
T Consensus 440 ~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~---~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~ 516 (599)
T 1w6s_A 440 PGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFA---VWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGA 516 (599)
T ss_dssp ECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSC---CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC
T ss_pred cCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCC---ccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCc
Confidence 1 357899999998888776643321 11111222466777799999999999999988765542221
Q ss_pred ceEEEEECCCCC-EEEE
Q psy15421 314 RVSCLGVTEDGM-AVAT 329 (340)
Q Consensus 314 ~i~~~~~s~d~~-~l~s 329 (340)
...-+.+..+|+ |+++
T Consensus 517 ~~~P~~y~~~G~qyv~~ 533 (599)
T 1w6s_A 517 IGYPMTYTHKGTQYVAI 533 (599)
T ss_dssp CSCCEEEEETTEEEEEE
T ss_pred EeccEEEEeCCEEEEEE
Confidence 112245566776 4443
No 264
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.66 E-value=0.00015 Score=70.13 Aligned_cols=271 Identities=8% Similarity=0.022 Sum_probs=164.1
Q ss_pred cCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEe---------eCCCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Q psy15421 55 LAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAI---------PLRSSWVMTCAYAPSGSFVACGGLDNICSIYS 125 (340)
Q Consensus 55 ~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~---------~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~ 125 (340)
...|.++...+++. |-.|..++-|..++..+....... ......|.++...+++.+.+ |..++-+..++
T Consensus 312 ~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~ 389 (781)
T 3v9f_A 312 NASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWI-GTDGGGINVFE 389 (781)
T ss_dssp SSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEE-EEBSSCEEEEE
T ss_pred CCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEE-EeCCCcEEEEE
Confidence 35789999888876 455676777888987654432211 11235688888888887664 45445567777
Q ss_pred ccCCCCceEEEE-eecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEec---CCCCeEEEEEcCCCCEEEE
Q psy15421 126 LKTREGNVRVSR-ELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIG---HTGDVMSLSLAPDMRTFVS 201 (340)
Q Consensus 126 ~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~s 201 (340)
..++. ..... ........|.++....++.|-.|+.++-+..+|..+++. ..+.. ....|.++...+++.+.+
T Consensus 390 ~~~~~--~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~v~~i~~d~~g~lwi- 465 (781)
T 3v9f_A 390 NGKRV--AIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKF-QIIELEKNELLDVRVFYEDKNKKIWI- 465 (781)
T ss_dssp TTEEE--EECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEE-EECCSTTTCCCCEEEEEECTTSEEEE-
T ss_pred CCCCe--EEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcE-EEeccCCCCCCeEEEEEECCCCCEEE-
Confidence 54321 11100 001223456666665567777788777788999877643 22221 235688888888876555
Q ss_pred EeCCCcEEEEECCCCeeeeEecCC-----CCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecC-C-cccceE
Q psy15421 202 GACDASAKLWDIRDGSCKQTFPGH-----ESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD-N-IICGIT 274 (340)
Q Consensus 202 g~~dg~i~~wd~~~~~~~~~~~~h-----~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~-~-~~~~i~ 274 (340)
|.. +-|..+|..+++........ ...|.++...++|...+. +.++-+..||..+.+.. .+... . ....|.
T Consensus 466 gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~~Gl~~~~~~~~~~~-~~~~~~~l~~~~i~ 542 (781)
T 3v9f_A 466 GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFGGGVGIYTPDMQLVR-KFNQYEGFCSNTIN 542 (781)
T ss_dssp EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESSSCEEEECTTCCEEE-EECTTTTCSCSCEE
T ss_pred EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEE-EcCCCEEEEeCCCCeEE-EccCCCCCCCCeeE
Confidence 444 56888998776543322211 357899999988875554 44344777887655432 23211 1 123478
Q ss_pred EEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccC----CcceEEEEECCCCCEEEEeeCCCcEE
Q psy15421 275 SVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH----DNRVSCLGVTEDGMAVATGSWDSFLR 337 (340)
Q Consensus 275 ~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h----~~~i~~~~~s~d~~~l~s~s~D~~i~ 337 (340)
++...++|.+.++ +.+|.+..|+..+.+. ..+... ...|.++...++|.+.+++ .+|..+
T Consensus 543 ~i~~d~~g~lWi~-T~~Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~lW~~t-~~Gl~~ 606 (781)
T 3v9f_A 543 QIYRSSKGQMWLA-TGEGLVCFPSARNFDY-QVFQRKEGLPNTHIRAISEDKNGNIWAST-NTGISC 606 (781)
T ss_dssp EEEECTTSCEEEE-ETTEEEEESCTTTCCC-EEECGGGTCSCCCCCEEEECSSSCEEEEC-SSCEEE
T ss_pred EEEECCCCCEEEE-ECCCceEEECCCCCcE-EEccccCCCCCceEEEEEECCCCCEEEEc-CCceEE
Confidence 8888888886654 4466558888655432 222211 2467888889999866654 455443
No 265
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.65 E-value=4.1e-06 Score=76.67 Aligned_cols=179 Identities=10% Similarity=-0.036 Sum_probs=123.1
Q ss_pred EEEEeCCCeEEEEECCCCceEEEEec-CCCCeEEEEE-c-CCCCEEEEEe------------------CCCcEEEEECCC
Q psy15421 157 IVTSSGDMSCALWDIETGQQCASFIG-HTGDVMSLSL-A-PDMRTFVSGA------------------CDASAKLWDIRD 215 (340)
Q Consensus 157 l~~~~~d~~v~iwd~~~~~~~~~~~~-~~~~v~~~~~-~-~~~~~~~sg~------------------~dg~i~~wd~~~ 215 (340)
+++...+..|.+.|+.+.+....+.- ....+..+++ + |+++++++++ .++.+.+.|..+
T Consensus 105 fVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t 184 (595)
T 1fwx_A 105 FMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADK 184 (595)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTT
T ss_pred EEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCC
Confidence 34444577899999999987775432 2245778887 5 9999988874 356899999999
Q ss_pred CeeeeEecCCCCCeEEEEEecCCCEEEEEeCCC--------------------------------------cEEEEeCcC
Q psy15421 216 GSCKQTFPGHESDINAVTFFPNGWAFATGSDDA--------------------------------------TCRLFDIRA 257 (340)
Q Consensus 216 ~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~--------------------------------------~i~iwd~~~ 257 (340)
.+....+.--. ....++++|+|+++++.+.+. .|.+.|..+
T Consensus 185 ~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~ 263 (595)
T 1fwx_A 185 WEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRK 263 (595)
T ss_dssp TEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSG
T ss_pred CeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcc
Confidence 88776665212 345678999999988877553 356666665
Q ss_pred --CcE-EEEeecCCcccceEEEEEcCCCcEEEEEe-CCCcEEEEeCCCce------------eeeeeccCCcceEEEEEC
Q psy15421 258 --DQE-LAMYSHDNIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMKTE------------RAGILAGHDNRVSCLGVT 321 (340)
Q Consensus 258 --~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~g~-~d~~i~iw~~~~~~------------~~~~~~~h~~~i~~~~~s 321 (340)
.+. +...... ....++.++|||+++++++ .+.+|.++|..+.+ ...... -...-..++|+
T Consensus 264 ~~~~~~~~~Ipvg---~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~ 339 (595)
T 1fwx_A 264 EASSLFTRYIPIA---NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFD 339 (595)
T ss_dssp GGCCSSEEEEEEE---SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEEC
T ss_pred cCCceeEEEEecC---CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEEC
Confidence 222 2222211 1356789999999877655 67899999987653 122221 12345678999
Q ss_pred CCCCEEEEeeCCCcEEecC
Q psy15421 322 EDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 322 ~d~~~l~s~s~D~~i~iW~ 340 (340)
|||...++.-.|++|.+||
T Consensus 340 ~dG~aY~t~~ldsqV~kwd 358 (595)
T 1fwx_A 340 GRGNAYTSLFLDSQVVKWN 358 (595)
T ss_dssp TTSEEEEEETTTTEEEEEE
T ss_pred CCCeEEEEEecCCcEEEEE
Confidence 9997677888899999996
No 266
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.59 E-value=0.00012 Score=68.27 Aligned_cols=257 Identities=14% Similarity=0.131 Sum_probs=148.7
Q ss_pred CCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCC----cE---EEEEEC-CCCC-EEEEEe------CCCeEEEEEccCCCC
Q psy15421 67 SRNLVSASQDGKLIVWDSYTTNKVHAIPLRSS----WV---MTCAYA-PSGS-FVACGG------LDNICSIYSLKTREG 131 (340)
Q Consensus 67 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~----~i---~~v~~~-~~~~-~l~~~~------~d~~v~i~~~~~~~~ 131 (340)
+..++.++.|+.|..+|..+++.+........ .+ ..+.-. .+++ .++++. .++.+..+|..+++.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 45677788999999999999998876654321 01 111111 1233 555554 267888888776653
Q ss_pred ceEEEEeecC-CC------------------------------------c-ce-EEEEEc-CCCeEEEEeC---------
Q psy15421 132 NVRVSRELPG-HT------------------------------------G-YL-SCCRFL-DDNQIVTSSG--------- 162 (340)
Q Consensus 132 ~~~~~~~~~~-~~------------------------------------~-~v-~~~~~~-~~~~l~~~~~--------- 162 (340)
... ..... +. + .+ ....+. ..+.+..+..
T Consensus 197 ~W~--~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~ 274 (582)
T 1flg_A 197 IWM--RPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWA 274 (582)
T ss_dssp EEE--EESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGG
T ss_pred Eee--cCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcc
Confidence 332 11100 00 0 00 011222 2345554442
Q ss_pred -----------C----CeEEEEECCCCceEEEEec--CCC-------CeEEEEEc-CCCC---EEEEEeCCCcEEEEECC
Q psy15421 163 -----------D----MSCALWDIETGQQCASFIG--HTG-------DVMSLSLA-PDMR---TFVSGACDASAKLWDIR 214 (340)
Q Consensus 163 -----------d----~~v~iwd~~~~~~~~~~~~--~~~-------~v~~~~~~-~~~~---~~~sg~~dg~i~~wd~~ 214 (340)
| +.|..+|..+|+..-.+.. |.. ...-+... .+++ .++.++.+|.+.++|.+
T Consensus 275 r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~ 354 (582)
T 1flg_A 275 RTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRS 354 (582)
T ss_dssp GSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETT
T ss_pred cccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECC
Confidence 2 6899999999998877653 321 11112222 4664 67789999999999999
Q ss_pred CCeeeeEecCCC-------------CCe--------------------------------EEEEEecCCCEEEEEe----
Q psy15421 215 DGSCKQTFPGHE-------------SDI--------------------------------NAVTFFPNGWAFATGS---- 245 (340)
Q Consensus 215 ~~~~~~~~~~h~-------------~~v--------------------------------~~v~~~~~~~~l~s~s---- 245 (340)
+|+.+..++... .++ ..++++|+...+....
T Consensus 355 tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~ 434 (582)
T 1flg_A 355 NGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWK 434 (582)
T ss_dssp TCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEE
T ss_pred CCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcc
Confidence 998765443221 000 1245566543333321
Q ss_pred -----------------------------CCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEE
Q psy15421 246 -----------------------------DDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNV 296 (340)
Q Consensus 246 -----------------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~i 296 (340)
.+|.|.-||..+++.+......... ..-.....+.+++.|+.|+.++.
T Consensus 435 ~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~---~~g~~~tagglvf~g~~dg~l~A 511 (582)
T 1flg_A 435 EDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPL---WAGVLATAGNLVFTGTGDGYFKA 511 (582)
T ss_dssp EEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCC---CSCCEEETTTEEEEECTTSEEEE
T ss_pred eeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCC---cccceEeCCCEEEEECCCCcEEE
Confidence 3688999999998887766543211 11111124667778999999999
Q ss_pred EeCCCceeeeeeccCCcce-EEEEECCCCCEEE
Q psy15421 297 WDSMKTERAGILAGHDNRV-SCLGVTEDGMAVA 328 (340)
Q Consensus 297 w~~~~~~~~~~~~~h~~~i-~~~~~s~d~~~l~ 328 (340)
||..+++.+-.+.-....+ .-+.|..+|+.++
T Consensus 512 ~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv 544 (582)
T 1flg_A 512 FDAKSGKELWKFQTGSGIVSPPITWEQDGEQYL 544 (582)
T ss_dssp EETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred EECCCCCEEEEecCCCCcccCceEEEECCEEEE
Confidence 9999999877665432221 2256667886433
No 267
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.55 E-value=0.00033 Score=60.81 Aligned_cols=241 Identities=8% Similarity=-0.002 Sum_probs=137.2
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEe-CCCeEEEEEccCCCCceE
Q psy15421 56 AKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGG-LDNICSIYSLKTREGNVR 134 (340)
Q Consensus 56 ~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~-~d~~v~i~~~~~~~~~~~ 134 (340)
+...|.+..++..+++ +....|+..++........+.. ......++|.+.+..|+... ..+.|..+++...... .
T Consensus 34 d~~~C~~~~~~~~ll~--~~~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~-~ 109 (349)
T 3v64_C 34 DRRSCKALGPEPVLLF--ANRIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE-E 109 (349)
T ss_dssp TSSCEEESSSCCEEEE--ECBSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-E
T ss_pred CCCcccccccCceeEe--ecccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCce-E
Confidence 3445555555433333 3445688888765544333332 34477899997666555444 5677777777543211 1
Q ss_pred EEEeecCCCcceEEEEEc-CCCe-EEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEE-EEEeCC-CcEEE
Q psy15421 135 VSRELPGHTGYLSCCRFL-DDNQ-IVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTF-VSGACD-ASAKL 210 (340)
Q Consensus 135 ~~~~~~~~~~~v~~~~~~-~~~~-l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~sg~~d-g~i~~ 210 (340)
+ ..........+.+. .++. +++-...+.|.+.++........+.........+++.|.+..+ .+-... +.|..
T Consensus 110 ~---~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r 186 (349)
T 3v64_C 110 V---VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEA 186 (349)
T ss_dssp E---ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred E---EeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEE
Confidence 1 11111122334443 2344 4555567889999987543322232333567899999965544 454445 78888
Q ss_pred EECCCCeeeeEe-cCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEE
Q psy15421 211 WDIRDGSCKQTF-PGHESDINAVTFFPNGW-AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAG 288 (340)
Q Consensus 211 wd~~~~~~~~~~-~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g 288 (340)
+++... ....+ ...-...+.++++|++. .+++=+..+.|..+|+.......... .. ......+++ ..+.++++-
T Consensus 187 ~~~dG~-~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~-~~-~~~P~giav-~~~~ly~td 262 (349)
T 3v64_C 187 SSMDGS-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS-QG-LPHPFAITV-FEDSLYWTD 262 (349)
T ss_dssp EETTSC-SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SS-CSSEEEEEE-ETTEEEEEE
T ss_pred EeCCCC-CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEe-CC-CCCceEEEE-ECCEEEEec
Confidence 887643 22333 22234578999998654 55555667889999987543322221 11 123566777 355666676
Q ss_pred eCCCcEEEEeCCCceeeee
Q psy15421 289 YDDFNCNVWDSMKTERAGI 307 (340)
Q Consensus 289 ~~d~~i~iw~~~~~~~~~~ 307 (340)
...+.|..++..+++....
T Consensus 263 ~~~~~V~~~~~~~G~~~~~ 281 (349)
T 3v64_C 263 WHTKSINSANKFTGKNQEI 281 (349)
T ss_dssp TTTTEEEEEETTTCCSCEE
T ss_pred CCCCeEEEEEccCCCccEE
Confidence 6778888888555544333
No 268
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.44 E-value=8.4e-06 Score=77.28 Aligned_cols=230 Identities=11% Similarity=0.057 Sum_probs=127.5
Q ss_pred cEEEEEEcCCCCeEEEEeC-CCeEEEEeCCCCCeeEEeeCCC-CcEEEEEECCCCCEEEEEe-CC-----CeEEEEEccC
Q psy15421 57 KIYAMHWGSDSRNLVSASQ-DGKLIVWDSYTTNKVHAIPLRS-SWVMTCAYAPSGSFVACGG-LD-----NICSIYSLKT 128 (340)
Q Consensus 57 ~v~~~~~s~~~~~l~s~~~-d~~i~iwd~~~~~~~~~~~~~~-~~i~~v~~~~~~~~l~~~~-~d-----~~v~i~~~~~ 128 (340)
-..++++..++++++.||. +..+.+||..+.+....-..+. ..-.+++..+++++++.|+ .+ +.+.+||..+
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp SSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred ccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 3445677789999999984 5689999987765433222221 2223455667899999998 34 5688899865
Q ss_pred CCCceEEEEe---ecCCCcceEEEEE-cCCCeEEEEeC---------CCeEEEEECCCCceEEEEecCCC---------C
Q psy15421 129 REGNVRVSRE---LPGHTGYLSCCRF-LDDNQIVTSSG---------DMSCALWDIETGQQCASFIGHTG---------D 186 (340)
Q Consensus 129 ~~~~~~~~~~---~~~~~~~v~~~~~-~~~~~l~~~~~---------d~~v~iwd~~~~~~~~~~~~~~~---------~ 186 (340)
.. +..... .+.....-. ..+ .++..++.++. ...+..||..++.-......+.. .
T Consensus 324 ~~--W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~ 400 (656)
T 1k3i_A 324 KT--WTSLPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMC 400 (656)
T ss_dssp TE--EEEETTSCSGGGCCCCTT-GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBT
T ss_pred Cc--ceeCCCcccccccccccc-ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCC
Confidence 32 211100 000000000 001 11222333332 34678899887654332222211 2
Q ss_pred eEEEEEc-CCCCEEEEEeCCC-----------cEEEEECCCCeeeeEe--cCCCCC-eEEEEEecCCCEEEEEeCC----
Q psy15421 187 VMSLSLA-PDMRTFVSGACDA-----------SAKLWDIRDGSCKQTF--PGHESD-INAVTFFPNGWAFATGSDD---- 247 (340)
Q Consensus 187 v~~~~~~-~~~~~~~sg~~dg-----------~i~~wd~~~~~~~~~~--~~h~~~-v~~v~~~~~~~~l~s~s~d---- 247 (340)
-.++.+. .++++++.|+.++ .|.+||..+..-.... ..+..+ -.+.+..|+++.++.|+.+
T Consensus 401 ~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~ 480 (656)
T 1k3i_A 401 GNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIP 480 (656)
T ss_dssp CEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCT
T ss_pred CceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcC
Confidence 2344443 3677888887543 6778888766533222 112222 2345667899999999865
Q ss_pred -------CcEEEEeCcCCcEEEEeec-CCcccceEEEEEcCCCcEEEEEeC
Q psy15421 248 -------ATCRLFDIRADQELAMYSH-DNIICGITSVAFSRSGRLLLAGYD 290 (340)
Q Consensus 248 -------~~i~iwd~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~g~~ 290 (340)
..+.+||..+.+=. .... ......-.++.+.|++++++.|+.
T Consensus 481 ~~~~~~~~~v~~ydp~t~~W~-~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 481 FEDSTPVFTPEIYVPEQDTFY-KQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp TCCCSBCCCCEEEEGGGTEEE-ECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred cCCCCcccceEEEcCCCCcee-ecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 46899998764321 1111 111112334567899999999985
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.39 E-value=0.00065 Score=60.76 Aligned_cols=237 Identities=7% Similarity=-0.014 Sum_probs=133.2
Q ss_pred cEEEEEEcC-CCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCC----C-eEEEEEccCCC
Q psy15421 57 KIYAMHWGS-DSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLD----N-ICSIYSLKTRE 130 (340)
Q Consensus 57 ~v~~~~~s~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d----~-~v~i~~~~~~~ 130 (340)
.-..++++| ++..|..+...+.|+.+|..++... .+.........+++++++++|+.+... . .+...+.....
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~-~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS-TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE-EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE-EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 346889998 3555555555588999998765533 333344557889999999966666542 1 23333322111
Q ss_pred CceEEEEeecCCCcceEEEEEcC-CCeEE-EEeCCCeEEEEECCCCceEEEEe-cCCCCeEEEEEcCCCC-EEEEEeCCC
Q psy15421 131 GNVRVSRELPGHTGYLSCCRFLD-DNQIV-TSSGDMSCALWDIETGQQCASFI-GHTGDVMSLSLAPDMR-TFVSGACDA 206 (340)
Q Consensus 131 ~~~~~~~~~~~~~~~v~~~~~~~-~~~l~-~~~~d~~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~~~sg~~dg 206 (340)
........ ..|. ..+.+.+ ++.|. +-..++.|..++...+....... ........++++|+++ ++++-...+
T Consensus 217 ~~~~~l~~-~~~p---~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~ 292 (430)
T 3tc9_A 217 KVITELTK-GQNC---NGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQH 292 (430)
T ss_dssp CSEEEEEE-CSSC---CCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTT
T ss_pred eeeeeecc-CCCc---eEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCC
Confidence 11111111 1222 2334555 55554 44467889999998665422222 1223578999999999 455556788
Q ss_pred cEEEEECCC--Cee--eeEecCC---------------CCCeE-EEEEe--------cCCCEEEEEeCCCcEEEEeCcCC
Q psy15421 207 SAKLWDIRD--GSC--KQTFPGH---------------ESDIN-AVTFF--------PNGWAFATGSDDATCRLFDIRAD 258 (340)
Q Consensus 207 ~i~~wd~~~--~~~--~~~~~~h---------------~~~v~-~v~~~--------~~~~~l~s~s~d~~i~iwd~~~~ 258 (340)
.|..++... +.. ...+.+. -.... .+++. +++..+++=...+.|+.++. .+
T Consensus 293 ~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G 371 (430)
T 3tc9_A 293 YILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QG 371 (430)
T ss_dssp EEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TS
T ss_pred EEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CC
Confidence 999987642 221 1111111 01123 45553 34666666666778888874 33
Q ss_pred cEEEEeec---------CC------cccceEEEEEcC-CCcEEEEEeCCCcEEEEeC
Q psy15421 259 QELAMYSH---------DN------IICGITSVAFSR-SGRLLLAGYDDFNCNVWDS 299 (340)
Q Consensus 259 ~~~~~~~~---------~~------~~~~i~~~~~s~-~~~~l~~g~~d~~i~iw~~ 299 (340)
........ .. .......++++| ++.++++-..+..|+.++.
T Consensus 372 ~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 372 RVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp EEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred cEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 33222221 00 112478899999 4666666666777877764
No 270
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.38 E-value=0.00052 Score=61.40 Aligned_cols=231 Identities=8% Similarity=0.059 Sum_probs=132.1
Q ss_pred EEEEEECC-CCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCe-EEEEeC-CC----eEEEEECC
Q psy15421 100 VMTCAYAP-SGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IVTSSG-DM----SCALWDIE 172 (340)
Q Consensus 100 i~~v~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~-d~----~v~iwd~~ 172 (340)
...++++| ++..|+.+...+.|+.+++..+ .... +.........+.+.+++. ++.+.. ++ .+...+..
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~--~v~~---~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKE--YVST---VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTT--EEEE---EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCC--EEEE---EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 45778888 4556666665577777776543 2211 112233345567766554 554443 22 23334432
Q ss_pred CCceE--EEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeeeeEec-CCCCCeEEEEEecCCC-EEEEEeCC
Q psy15421 173 TGQQC--ASFIGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFP-GHESDINAVTFFPNGW-AFATGSDD 247 (340)
Q Consensus 173 ~~~~~--~~~~~~~~~v~~~~~~~-~~~~~~sg~~dg~i~~wd~~~~~~~~~~~-~h~~~v~~v~~~~~~~-~l~s~s~d 247 (340)
+... ..+. .......++++| ++.++++-..++.|..++...+....... +.....+.++|+|+|+ .+++-...
T Consensus 214 -g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~ 291 (430)
T 3tc9_A 214 -SGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQ 291 (430)
T ss_dssp -GTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTT
T ss_pred -Cceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCC
Confidence 2211 2222 223467888999 67777777778999999988765422222 1223467899999998 55566667
Q ss_pred CcEEEEeCcCC-cEE---EEee-c---CC---------cccceE-EEEEc--------CCCcEEEEEeCCCcEEEEeCCC
Q psy15421 248 ATCRLFDIRAD-QEL---AMYS-H---DN---------IICGIT-SVAFS--------RSGRLLLAGYDDFNCNVWDSMK 301 (340)
Q Consensus 248 ~~i~iwd~~~~-~~~---~~~~-~---~~---------~~~~i~-~~~~s--------~~~~~l~~g~~d~~i~iw~~~~ 301 (340)
+.|..++.... ..+ ..+. . .. ...... .++.. +++.++++=..+..|+.++ .+
T Consensus 292 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~ 370 (430)
T 3tc9_A 292 HYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQ 370 (430)
T ss_dssp TEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TT
T ss_pred CEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CC
Confidence 88999886532 111 1111 1 00 011233 44543 4567777767778899888 44
Q ss_pred ceeeeeeccC------------------CcceEEEEECC-CCCEEEEeeCCCcEEec
Q psy15421 302 TERAGILAGH------------------DNRVSCLGVTE-DGMAVATGSWDSFLRIW 339 (340)
Q Consensus 302 ~~~~~~~~~h------------------~~~i~~~~~s~-d~~~l~s~s~D~~i~iW 339 (340)
+.... +.+. -..-..++++| ++.++++-..+..|+..
T Consensus 371 G~v~~-~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i 426 (430)
T 3tc9_A 371 GRVTT-FAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKI 426 (430)
T ss_dssp SEEEE-EEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred CcEEE-EEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEE
Confidence 54322 2211 12468899999 57777777667777754
No 271
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.38 E-value=0.001 Score=58.53 Aligned_cols=241 Identities=8% Similarity=-0.007 Sum_probs=136.3
Q ss_pred EEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEE-eCCCeEEEEEccCCCCceEEEE
Q psy15421 59 YAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACG-GLDNICSIYSLKTREGNVRVSR 137 (340)
Q Consensus 59 ~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~-~~d~~v~i~~~~~~~~~~~~~~ 137 (340)
.+.+..++ .+|+ .+....|+..++.......... .......++|.+.+..|+.. ...+.|..+++.... ...
T Consensus 80 ~C~~~~~~-~~l~-~~~~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~--~~~-- 152 (386)
T 3v65_B 80 SCKALGPE-PVLL-FANRIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN--VEE-- 152 (386)
T ss_dssp CEEECSSC-CEEE-EECBSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC--EEE--
T ss_pred eECCcccc-ceeE-eecCccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC--cEE--
Confidence 34444443 3333 3444678888887655433333 23457789999766555544 456777777765432 111
Q ss_pred eecCCCcceEEEEEc-CCCe-EEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEE-EEeCC-CcEEEEEC
Q psy15421 138 ELPGHTGYLSCCRFL-DDNQ-IVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFV-SGACD-ASAKLWDI 213 (340)
Q Consensus 138 ~~~~~~~~v~~~~~~-~~~~-l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-sg~~d-g~i~~wd~ 213 (340)
.+.........+.+. ..+. +++-...+.|.+.++........+.........+++.|.+..++ +-... +.|..+++
T Consensus 153 ~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~ 232 (386)
T 3v65_B 153 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 232 (386)
T ss_dssp EECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeC
Confidence 111111112223343 2344 44555577888888865433222333335688999998766554 44444 78888887
Q ss_pred CCCeeeeEecCCCCCeEEEEEecCC-CEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCC
Q psy15421 214 RDGSCKQTFPGHESDINAVTFFPNG-WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDF 292 (340)
Q Consensus 214 ~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~ 292 (340)
................+.|+++|++ ..+++=+..+.|..+|+.......... .. ......+++ ..+.++++-...+
T Consensus 233 dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~-~~-~~~P~giav-~~~~ly~td~~~~ 309 (386)
T 3v65_B 233 DGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS-QG-LPHPFAITV-FEDSLYWTDWHTK 309 (386)
T ss_dssp TSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEEC-SS-CSSEEEEEE-ETTEEEEEETTTT
T ss_pred CCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEE-CC-CCCceEEEE-ECCEEEEeeCCCC
Confidence 6433222223333457899999764 455565667889999987543332222 11 123566777 3556677777788
Q ss_pred cEEEEeCCCceeeeeec
Q psy15421 293 NCNVWDSMKTERAGILA 309 (340)
Q Consensus 293 ~i~iw~~~~~~~~~~~~ 309 (340)
.|..++..+++....+.
T Consensus 310 ~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 310 SINSANKFTGKNQEIIR 326 (386)
T ss_dssp EEEEEETTTCCSCEEEE
T ss_pred eEEEEECCCCcceEEEc
Confidence 89888866665544443
No 272
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.35 E-value=0.00056 Score=61.20 Aligned_cols=233 Identities=10% Similarity=0.080 Sum_probs=135.4
Q ss_pred EEEEEECCC--CCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCC----e-EEEEECC
Q psy15421 100 VMTCAYAPS--GSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDM----S-CALWDIE 172 (340)
Q Consensus 100 i~~v~~~~~--~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~----~-v~iwd~~ 172 (340)
...++++|+ +..|+.+...+.|+.++...+. . ..+.........+.+.+++.|..+...+ . +...+..
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~--v---~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQY--V---DIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTE--E---EEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGG
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCE--E---EEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECC
Confidence 457889984 4445455444778888875432 1 1222233345567776665555544321 2 3333332
Q ss_pred CCceEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeeeeEe-c-CCCCCeEEEEEecCCC-EEEEEeCCC
Q psy15421 173 TGQQCASFIGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTF-P-GHESDINAVTFFPNGW-AFATGSDDA 248 (340)
Q Consensus 173 ~~~~~~~~~~~~~~v~~~~~~~-~~~~~~sg~~dg~i~~wd~~~~~~~~~~-~-~h~~~v~~v~~~~~~~-~l~s~s~d~ 248 (340)
.+...............++++| ++.++++-..++.|..+|..++.....+ . +.......++|+|++. .+++-...+
T Consensus 216 ~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~ 295 (433)
T 4hw6_A 216 SGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH 295 (433)
T ss_dssp GTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT
T ss_pred CCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC
Confidence 2211111112234466788999 6776666667889999998877652222 1 1122234799999998 555556678
Q ss_pred cEEEEeCcC--CcE--EEEe-ec---C---------CcccceEEEEE---------cCCCcEEEEEeCCCcEEEEeCCCc
Q psy15421 249 TCRLFDIRA--DQE--LAMY-SH---D---------NIICGITSVAF---------SRSGRLLLAGYDDFNCNVWDSMKT 302 (340)
Q Consensus 249 ~i~iwd~~~--~~~--~~~~-~~---~---------~~~~~i~~~~~---------s~~~~~l~~g~~d~~i~iw~~~~~ 302 (340)
.|+.++... ... ...+ .. . ........+++ .+++.++++-..+..|+.++. ++
T Consensus 296 ~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G 374 (433)
T 4hw6_A 296 CIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EG 374 (433)
T ss_dssp EEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TS
T ss_pred EEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CC
Confidence 899988652 211 0111 11 0 01123677899 788888888778889999984 55
Q ss_pred eeeeeeccC------------------CcceEEEEEC-CCCCEEEEeeCCCcEEec
Q psy15421 303 ERAGILAGH------------------DNRVSCLGVT-EDGMAVATGSWDSFLRIW 339 (340)
Q Consensus 303 ~~~~~~~~h------------------~~~i~~~~~s-~d~~~l~s~s~D~~i~iW 339 (340)
... .+.+. -..-..++++ ++|.++++-..+..|+..
T Consensus 375 ~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i 429 (433)
T 4hw6_A 375 RVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKI 429 (433)
T ss_dssp EEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred CEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEE
Confidence 332 22211 1236789999 788888877777788764
No 273
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.31 E-value=0.001 Score=59.43 Aligned_cols=237 Identities=12% Similarity=0.088 Sum_probs=134.2
Q ss_pred cEEEEEEcCC--CCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCC---Ce-EEEEEccCCC
Q psy15421 57 KIYAMHWGSD--SRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLD---NI-CSIYSLKTRE 130 (340)
Q Consensus 57 ~v~~~~~s~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d---~~-v~i~~~~~~~ 130 (340)
.-..++|+|+ +..|..+...+.|+.+|..++... .+.........++++++++++++.... .. +...+.....
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~-~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVD-IKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEE-EECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEE-EeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 3468999985 344444444489999998766543 333344557899999999954443311 12 2222221111
Q ss_pred CceEEEEeecCCCcceEEEEEcC-CCeEE-EEeCCCeEEEEECCCCceEEEEecC--CCCeEEEEEcCCCC-EEEEEeCC
Q psy15421 131 GNVRVSRELPGHTGYLSCCRFLD-DNQIV-TSSGDMSCALWDIETGQQCASFIGH--TGDVMSLSLAPDMR-TFVSGACD 205 (340)
Q Consensus 131 ~~~~~~~~~~~~~~~v~~~~~~~-~~~l~-~~~~d~~v~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~~~-~~~sg~~d 205 (340)
........+ .+ -..+.+.+ ++.|. +-..++.|..+|..++.....+... ......++++|+++ ++++-...
T Consensus 219 ~~~~~~~~~-~~---P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~ 294 (433)
T 4hw6_A 219 TERLSLCNA-RG---AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGK 294 (433)
T ss_dssp CCEEEEEEC-SS---BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTT
T ss_pred ecccccccc-CC---CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCC
Confidence 100111111 11 12233444 55554 4445788999999877653333221 22235799999998 45555567
Q ss_pred CcEEEEECC--CCee--eeEecCC---------------CCCeEEEEE---------ecCCCEEEEEeCCCcEEEEeCcC
Q psy15421 206 ASAKLWDIR--DGSC--KQTFPGH---------------ESDINAVTF---------FPNGWAFATGSDDATCRLFDIRA 257 (340)
Q Consensus 206 g~i~~wd~~--~~~~--~~~~~~h---------------~~~v~~v~~---------~~~~~~l~s~s~d~~i~iwd~~~ 257 (340)
+.|..++.. ++.. ...+.+. -.....+++ .+++..+++=...+.|+.++..
T Consensus 295 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~- 373 (433)
T 4hw6_A 295 HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE- 373 (433)
T ss_dssp TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT-
T ss_pred CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCC-
Confidence 899998765 2321 1111111 123567899 7778777777778889998853
Q ss_pred CcEEEEeecCC---------------cccceEEEEEc-CCCcEEEEEeCCCcEEEEeC
Q psy15421 258 DQELAMYSHDN---------------IICGITSVAFS-RSGRLLLAGYDDFNCNVWDS 299 (340)
Q Consensus 258 ~~~~~~~~~~~---------------~~~~i~~~~~s-~~~~~l~~g~~d~~i~iw~~ 299 (340)
+.......... .......++++ +++.++++=..+..|+.++.
T Consensus 374 G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 374 GRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp SEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred CCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 33322221100 12236789999 67777776667777877764
No 274
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.31 E-value=0.0012 Score=56.38 Aligned_cols=230 Identities=8% Similarity=-0.036 Sum_probs=130.8
Q ss_pred CCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEE-eCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEc-
Q psy15421 75 QDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACG-GLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFL- 152 (340)
Q Consensus 75 ~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~-~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~- 152 (340)
....|+..|+.+.+....+.. -.....++|.+.+..++.+ ...+.|..+++............+.........+.+.
T Consensus 8 ~~~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~ 86 (316)
T 1ijq_A 8 NRHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 86 (316)
T ss_dssp CBSSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEET
T ss_pred CCCeEEEEECCCcceEehhcC-CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEee
Confidence 335688888877655444433 3456788999876555544 4567888888754100000111122111223344554
Q ss_pred CCCe-EEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEE-EEeCC-CcEEEEECCCCeeeeEe-cCCCCC
Q psy15421 153 DDNQ-IVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFV-SGACD-ASAKLWDIRDGSCKQTF-PGHESD 228 (340)
Q Consensus 153 ~~~~-l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-sg~~d-g~i~~wd~~~~~~~~~~-~~h~~~ 228 (340)
.++. +++-...+.|.+.++........+.........+++.|.+..++ +.... +.|...++. +.....+ ...-..
T Consensus 87 ~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~ 165 (316)
T 1ijq_A 87 IHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQW 165 (316)
T ss_dssp TTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSC
T ss_pred cCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCC
Confidence 2444 44556678999999875433222232345688999999666554 43333 788888875 3333333 223345
Q ss_pred eEEEEEecCCC-EEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeee
Q psy15421 229 INAVTFFPNGW-AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI 307 (340)
Q Consensus 229 v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~ 307 (340)
.+.++++|++. .+++-+..+.|..+|+....................+++. .+.++++-...+.|..++..+++....
T Consensus 166 P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~ 244 (316)
T 1ijq_A 166 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNL 244 (316)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEE
T ss_pred ceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEE
Confidence 78999998755 4455556778999998754332222211111234566775 466777777788899988666554333
No 275
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.27 E-value=0.0019 Score=57.08 Aligned_cols=234 Identities=9% Similarity=-0.040 Sum_probs=134.1
Q ss_pred eCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEe-CCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEc
Q psy15421 74 SQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGG-LDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFL 152 (340)
Q Consensus 74 ~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~-~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 152 (340)
+....|+..++........+. ....+..++|++.+..|+... ..+.|+.+++............+.........+.+.
T Consensus 89 ~~~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD 167 (400)
T 3p5b_L 89 TNRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 167 (400)
T ss_dssp EETTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEE
T ss_pred eccceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEE
Confidence 344688888887655433333 345678899998666555554 457777777653210000111112122233444443
Q ss_pred C-CC-eEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEe-C-CCcEEEEECCCCeeeeEecCCCCC
Q psy15421 153 D-DN-QIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGA-C-DASAKLWDIRDGSCKQTFPGHESD 228 (340)
Q Consensus 153 ~-~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~-~-dg~i~~wd~~~~~~~~~~~~h~~~ 228 (340)
. .+ .+++-...+.|.+.++........+......+..+++.|.+..++... . .+.|...++.-......+...-..
T Consensus 168 ~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~ 247 (400)
T 3p5b_L 168 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQW 247 (400)
T ss_dssp TTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSC
T ss_pred ecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCc
Confidence 2 34 344555678899999876544333333445688999999665555433 2 478888887643322233333356
Q ss_pred eEEEEEecCCCEE-EEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeee
Q psy15421 229 INAVTFFPNGWAF-ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI 307 (340)
Q Consensus 229 v~~v~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~ 307 (340)
.+.|+++|++..| ++=...+.|..+|+....................+++. .+.++.+-...+.|..++..+++....
T Consensus 248 P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~ 326 (400)
T 3p5b_L 248 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNL 326 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEE
T ss_pred eEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEE
Confidence 7899999865554 45455778999998754433322221112224566663 445666767778899888766655544
Q ss_pred ec
Q psy15421 308 LA 309 (340)
Q Consensus 308 ~~ 309 (340)
+.
T Consensus 327 i~ 328 (400)
T 3p5b_L 327 LA 328 (400)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 276
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.25 E-value=0.0019 Score=56.03 Aligned_cols=189 Identities=6% Similarity=-0.028 Sum_probs=111.8
Q ss_pred eEEEEEc-CCCeEE-EEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCeeeeEe
Q psy15421 146 LSCCRFL-DDNQIV-TSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTF 222 (340)
Q Consensus 146 v~~~~~~-~~~~l~-~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~sg~~dg~i~~wd~~~~~~~~~~ 222 (340)
...+.|. .++.|. +-...+.|..+++........+.........+++.+.+ .++++-...+.|.+.++........+
T Consensus 75 ~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~ 154 (349)
T 3v64_C 75 AIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 154 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred eEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEE
Confidence 4556665 345544 44457889999987655333332223456788998754 45556666789999998644333333
Q ss_pred cCCCCCeEEEEEecC-CCEEEEEeCC-CcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEE-EeCCCcEEEEeC
Q psy15421 223 PGHESDINAVTFFPN-GWAFATGSDD-ATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLA-GYDDFNCNVWDS 299 (340)
Q Consensus 223 ~~h~~~v~~v~~~~~-~~~l~s~s~d-~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-g~~d~~i~iw~~ 299 (340)
.......+.++++|. +..+.+-... +.|..+++......... ... ....+.++++|++..|.. -...+.|..++.
T Consensus 155 ~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~-~~~-~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~ 232 (349)
T 3v64_C 155 WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA-DTH-LFWPNGLTIDYAGRRMYWVDAKHHVIERANL 232 (349)
T ss_dssp CTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESC-CSS-CSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred eCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEE-ECC-CCCcceEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 333456789999985 5555565555 78888888754332221 111 224688999986665554 445678999986
Q ss_pred CCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEE
Q psy15421 300 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 337 (340)
Q Consensus 300 ~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~ 337 (340)
........+.........+++ .++..+++-...+.|.
T Consensus 233 dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~ 269 (349)
T 3v64_C 233 DGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSIN 269 (349)
T ss_dssp TSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEE
T ss_pred CCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEE
Confidence 543333333333445566776 3444455544455554
No 277
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.24 E-value=0.00027 Score=67.94 Aligned_cols=194 Identities=7% Similarity=-0.009 Sum_probs=105.9
Q ss_pred cEEEEEEc-CCCCeEEEE-eCC----CeEEEEeCCCC-CeeE-EeeCCCCcEEEEEECCCCCEEEEEeCCC-----eEEE
Q psy15421 57 KIYAMHWG-SDSRNLVSA-SQD----GKLIVWDSYTT-NKVH-AIPLRSSWVMTCAYAPSGSFVACGGLDN-----ICSI 123 (340)
Q Consensus 57 ~v~~~~~s-~~~~~l~s~-~~d----~~i~iwd~~~~-~~~~-~~~~~~~~i~~v~~~~~~~~l~~~~~d~-----~v~i 123 (340)
.+...+|| |||++|+-+ +.+ .+|+++|+.++ +.+. .+. .....++|+||++.|+....+. .|.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57788999 999987743 323 35999999888 5321 111 1123568999998887776652 4566
Q ss_pred EEccCCCCceEEEEeecCCCcceEEEEEcCCCe-EEEEe---CCCeEEEEECCCCc-eE--EEEec-CCCCeEEEEEcCC
Q psy15421 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IVTSS---GDMSCALWDIETGQ-QC--ASFIG-HTGDVMSLSLAPD 195 (340)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~---~d~~v~iwd~~~~~-~~--~~~~~-~~~~v~~~~~~~~ 195 (340)
+++.++...-...... ..........+++++. |+..+ ....|.++|+.++. .. ..+.. ..+...++.|+.+
T Consensus 252 ~~lgt~~~~~~lv~~~-~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g 330 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEE-HNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGT 330 (751)
T ss_dssp EETTSCGGGCEEEEEC-CCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETT
T ss_pred EECCCCchhcEEEEec-CCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeC
Confidence 6665432211122111 2223445567777764 44333 24468888987752 22 33322 3344566665555
Q ss_pred CCEEEEEeCC----CcEEEEECCCCeeeeE-ecCCCC--CeEEEEEecCCCEEEEEeCCCcEE--EEeC
Q psy15421 196 MRTFVSGACD----ASAKLWDIRDGSCKQT-FPGHES--DINAVTFFPNGWAFATGSDDATCR--LFDI 255 (340)
Q Consensus 196 ~~~~~sg~~d----g~i~~wd~~~~~~~~~-~~~h~~--~v~~v~~~~~~~~l~s~s~d~~i~--iwd~ 255 (340)
+.+++....+ ..|..+|+.++..... +-.+.. .+..+.+. .+..+++...++..+ ++|+
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 5555554443 3566667664222222 223333 34455554 244566777777654 4554
No 278
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.24 E-value=0.0041 Score=59.82 Aligned_cols=233 Identities=9% Similarity=-0.040 Sum_probs=129.2
Q ss_pred eCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEE-EEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEc
Q psy15421 74 SQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVA-CGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFL 152 (340)
Q Consensus 74 ~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~-~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 152 (340)
+....|+..++...+....+. ....+..++|.+....|+ +-...+.|+.+++............+.........+.+.
T Consensus 401 an~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD 479 (791)
T 3m0c_C 401 TNRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 479 (791)
T ss_dssp ECBSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred ccccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeee
Confidence 444567777776554333333 335567889988555544 444557777777753211001111122122223334443
Q ss_pred C-C-CeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEe-CC-CcEEEEECCCCeeeeEecCCCCC
Q psy15421 153 D-D-NQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGA-CD-ASAKLWDIRDGSCKQTFPGHESD 228 (340)
Q Consensus 153 ~-~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~-~d-g~i~~wd~~~~~~~~~~~~h~~~ 228 (340)
. . ..+++-...+.|.+.++........+.........|++.|....|+... .. +.|...++.-......+...-..
T Consensus 480 ~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~ 559 (791)
T 3m0c_C 480 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQW 559 (791)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSC
T ss_pred ecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCC
Confidence 2 3 3455556678999999975543333333445688999999755554433 33 78888888643333333333356
Q ss_pred eEEEEEecCCC-EEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeee
Q psy15421 229 INAVTFFPNGW-AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI 307 (340)
Q Consensus 229 v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~ 307 (340)
.+.|++++.+. ++++=.....|...++....................+++.. +.++++-...+.|...+..+++....
T Consensus 560 P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~~~~ 638 (791)
T 3m0c_C 560 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNL 638 (791)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEE
T ss_pred ceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcceEE
Confidence 88999997654 44554556789999987554433332211112244666643 35555656677888888666654444
Q ss_pred e
Q psy15421 308 L 308 (340)
Q Consensus 308 ~ 308 (340)
+
T Consensus 639 l 639 (791)
T 3m0c_C 639 L 639 (791)
T ss_dssp E
T ss_pred e
Confidence 3
No 279
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.23 E-value=0.0023 Score=56.34 Aligned_cols=190 Identities=6% Similarity=-0.044 Sum_probs=112.0
Q ss_pred eEEEEEc-CCCeEE-EEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCeeeeEe
Q psy15421 146 LSCCRFL-DDNQIV-TSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTF 222 (340)
Q Consensus 146 v~~~~~~-~~~~l~-~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~sg~~dg~i~~wd~~~~~~~~~~ 222 (340)
...+.|. .++.|. +-...+.|..+++........+.........+++.+.+. ++++-...+.|.+.++........+
T Consensus 118 ~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~ 197 (386)
T 3v65_B 118 AIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 197 (386)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEE
T ss_pred cEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEee
Confidence 4556665 345544 444578899999876553333332233466788887544 4556666788988887644333333
Q ss_pred cCCCCCeEEEEEecCCC-EEEEEeCC-CcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEE-EEeCCCcEEEEeC
Q psy15421 223 PGHESDINAVTFFPNGW-AFATGSDD-ATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLL-AGYDDFNCNVWDS 299 (340)
Q Consensus 223 ~~h~~~v~~v~~~~~~~-~l~s~s~d-~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~g~~d~~i~iw~~ 299 (340)
.......+.++++|.+. .+.+-... +.|..+++......... ... ....+.++|+|++..|. +=...+.|..++.
T Consensus 198 ~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~-~~~-~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~ 275 (386)
T 3v65_B 198 WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA-DTH-LFWPNGLTIDYAGRRMYWVDAKHHVIERANL 275 (386)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSS-CSCEEEEEEEGGGTEEEEEETTTTEEEEECT
T ss_pred cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE-ECC-CCCeeeEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 33335678999998654 45554445 77888888754332222 112 22368899998665554 4445678999986
Q ss_pred CCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEe
Q psy15421 300 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 338 (340)
Q Consensus 300 ~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~i 338 (340)
........+.........+++ .++..+++-...+.|..
T Consensus 276 dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~ 313 (386)
T 3v65_B 276 DGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINS 313 (386)
T ss_dssp TSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEE
T ss_pred CCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEE
Confidence 543333333333445566777 34445555555555544
No 280
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.12 E-value=0.00018 Score=69.16 Aligned_cols=190 Identities=13% Similarity=0.089 Sum_probs=105.8
Q ss_pred ceEEEEEc-CCCe-EEEE-eCC----CeEEEEECCCC-ceEE-EEecCCCCeEEEEEcCCCCEEEEEeCC-----CcEEE
Q psy15421 145 YLSCCRFL-DDNQ-IVTS-SGD----MSCALWDIETG-QQCA-SFIGHTGDVMSLSLAPDMRTFVSGACD-----ASAKL 210 (340)
Q Consensus 145 ~v~~~~~~-~~~~-l~~~-~~d----~~v~iwd~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~~~sg~~d-----g~i~~ 210 (340)
.+....|+ +++. ++-+ ..+ ..|.++|+.++ +.+. .+.. ....++|+||++.|+....| ..|.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 45567788 7775 3322 222 35999999988 6321 1111 13467899999877765554 36788
Q ss_pred EECCCCee--eeEec-CCCCCeEEEEEecCCCEEEEEeC---CCcEEEEeCcCCc-EE--EEeecCCcccceEEEEEcCC
Q psy15421 211 WDIRDGSC--KQTFP-GHESDINAVTFFPNGWAFATGSD---DATCRLFDIRADQ-EL--AMYSHDNIICGITSVAFSRS 281 (340)
Q Consensus 211 wd~~~~~~--~~~~~-~h~~~v~~v~~~~~~~~l~s~s~---d~~i~iwd~~~~~-~~--~~~~~~~~~~~i~~~~~s~~ 281 (340)
+++.++.. ...+. ........+.|+|||++|+..+. ...|+++|+.+.. .. ..+... ......++.|+.+
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~-~~~~~~s~~~~~g 330 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPR-EKGVRYDVQMHGT 330 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCC-CTTCCEEEEEETT
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecC-CCCceEEEeeeeC
Confidence 88877642 22332 22234567899999998876553 3457888887642 11 222111 1123445555555
Q ss_pred CcEEEEEeCC----CcEEEEeCCCceeeee-eccCCc--ceEEEEECCCCCEEEEeeCCCcEEec
Q psy15421 282 GRLLLAGYDD----FNCNVWDSMKTERAGI-LAGHDN--RVSCLGVTEDGMAVATGSWDSFLRIW 339 (340)
Q Consensus 282 ~~~l~~g~~d----~~i~iw~~~~~~~~~~-~~~h~~--~i~~~~~s~d~~~l~s~s~D~~i~iW 339 (340)
+.+++....+ ..|..++..+...... +..|.. .+..+.+.. +.++++...|+..+||
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~ 394 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRS-NYLVVAGRRAGLTRIW 394 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECS-SEEEEEEEETTEEEEE
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEEC-CEEEEEEEeCCEEEEE
Confidence 5555554443 3566666554222222 333433 445555552 3456677778876654
No 281
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.11 E-value=0.0012 Score=55.97 Aligned_cols=157 Identities=11% Similarity=0.043 Sum_probs=105.2
Q ss_pred eEEEEEcC-CCeEEEEe-CCCeEEEEECCCCceEEEEecC-----CC--CeEEEEE---cCCCCEEEEEe----------
Q psy15421 146 LSCCRFLD-DNQIVTSS-GDMSCALWDIETGQQCASFIGH-----TG--DVMSLSL---APDMRTFVSGA---------- 203 (340)
Q Consensus 146 v~~~~~~~-~~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~-----~~--~v~~~~~---~~~~~~~~sg~---------- 203 (340)
-.+..|.+ .+.+..++ ..+.|..||...+......... .. .+..+.+ .|+++++++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 33456644 45665555 6999999999765433332222 11 3578999 68877776533
Q ss_pred ---CCCcEEEEECC---CCeeeeEec--C-----------CCCCeEEEEEecCCCEEEEEeCC-CcEEEEeCcCCcEEEE
Q psy15421 204 ---CDASAKLWDIR---DGSCKQTFP--G-----------HESDINAVTFFPNGWAFATGSDD-ATCRLFDIRADQELAM 263 (340)
Q Consensus 204 ---~dg~i~~wd~~---~~~~~~~~~--~-----------h~~~v~~v~~~~~~~~l~s~s~d-~~i~iwd~~~~~~~~~ 263 (340)
.+..|..+|+. +++.+.... . .....+.+++.++|+.+++++.- +.|...+.........
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~ 174 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTF 174 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeee
Confidence 26889999998 776544332 1 11247899999999999999988 8877777664422211
Q ss_pred e-ec--CCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCc
Q psy15421 264 Y-SH--DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT 302 (340)
Q Consensus 264 ~-~~--~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~ 302 (340)
+ .. .......+.++++|+|..|++....+.+..+|+.+.
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred eecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 1 11 112345778999999999888877999999997643
No 282
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.06 E-value=0.0033 Score=51.64 Aligned_cols=198 Identities=11% Similarity=0.138 Sum_probs=125.0
Q ss_pred EeecCCCcceEEEEEcCC-CeEEE-EeCCCeEEEEECCCCceEEEEec-CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q psy15421 137 RELPGHTGYLSCCRFLDD-NQIVT-SSGDMSCALWDIETGQQCASFIG-HTGDVMSLSLAPDMRTFVSGACDASAKLWDI 213 (340)
Q Consensus 137 ~~~~~~~~~v~~~~~~~~-~~l~~-~~~d~~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~ 213 (340)
+.+++-...+..+.+.++ +.|.+ ...++.|...|+. ++....+.- -....-.+++.+++.++++.-.++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 355666667888888754 55554 5668889999998 777666532 2245778888888887777667888999987
Q ss_pred CCCee---eeEec------CCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcC---CcEEEEeec-----CCcccceEEE
Q psy15421 214 RDGSC---KQTFP------GHESDINAVTFFPNGWAFATGSDDATCRLFDIRA---DQELAMYSH-----DNIICGITSV 276 (340)
Q Consensus 214 ~~~~~---~~~~~------~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~---~~~~~~~~~-----~~~~~~i~~~ 276 (340)
..... ..... ........++++|.+..|.++.......+|.+.. ...+..... ......+.++
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 65432 12221 1234468999999987776666655555555431 111121111 1122347899
Q ss_pred EEcCC-CcEEEEEeCCCcEEEEeCCCceeeeeec---cC------CcceEEEEECCCCCEEEEeeCCCcEE
Q psy15421 277 AFSRS-GRLLLAGYDDFNCNVWDSMKTERAGILA---GH------DNRVSCLGVTEDGMAVATGSWDSFLR 337 (340)
Q Consensus 277 ~~s~~-~~~l~~g~~d~~i~iw~~~~~~~~~~~~---~h------~~~i~~~~~s~d~~~l~s~s~D~~i~ 337 (340)
+++|. +++++.......+..+|. +++.+..+. +. ...-..++|.++|+++++ |....++
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~-~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y 247 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTL-VGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFY 247 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECT-TCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEE
T ss_pred EEcCCCCeEEEEECCCCeEEEEcC-CCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEE
Confidence 99986 566667777888889985 455544332 21 124578999999986665 5444444
No 283
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.05 E-value=7.5e-05 Score=71.10 Aligned_cols=233 Identities=9% Similarity=-0.024 Sum_probs=125.5
Q ss_pred CCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEe-CCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEc-
Q psy15421 75 QDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGG-LDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFL- 152 (340)
Q Consensus 75 ~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~-~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~- 152 (340)
..+.|+..++.+.+....+.. ...+..++|.+.+..|+.+. ..+.|+.+++............+.........+.+.
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~ 462 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 462 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCC
T ss_pred CccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEe
Confidence 445777777766554333322 23355778888776666554 456788887754100000001111111111223333
Q ss_pred CCC-eEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEE-EEeCC-CcEEEEECCCCeeeeEe-cCCCCC
Q psy15421 153 DDN-QIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFV-SGACD-ASAKLWDIRDGSCKQTF-PGHESD 228 (340)
Q Consensus 153 ~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-sg~~d-g~i~~wd~~~~~~~~~~-~~h~~~ 228 (340)
..+ .+++-...+.|.+.++........+.........+++.|.+..|+ +-... +.|..+++... ....+ ...-..
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~-~~~~l~~~~l~~ 541 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQW 541 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC-CCCEESCSSCSS
T ss_pred eCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC-CeeEEEeCCCCC
Confidence 233 344445578899999875433222222234567889998655444 43233 77887776532 22222 222234
Q ss_pred eEEEEEecC-CCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeee
Q psy15421 229 INAVTFFPN-GWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI 307 (340)
Q Consensus 229 v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~ 307 (340)
.+.|+|+|+ ++++++-+..+.|..+++....................+++..+ .++++....+.|..++..+++.+..
T Consensus 542 PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~ 620 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNL 620 (699)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEEC
T ss_pred ccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEE
Confidence 678999986 55666666778899999875433332221111112334555544 5666666778999999777776665
Q ss_pred ecc
Q psy15421 308 LAG 310 (340)
Q Consensus 308 ~~~ 310 (340)
+..
T Consensus 621 i~~ 623 (699)
T 1n7d_A 621 LAE 623 (699)
T ss_dssp CCT
T ss_pred eec
Confidence 543
No 284
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.99 E-value=0.0058 Score=52.13 Aligned_cols=224 Identities=8% Similarity=-0.055 Sum_probs=125.4
Q ss_pred CCCeEEEEeCCCCCeeEEee-CCCCcEEEEEECCCCCEE-EEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEc
Q psy15421 75 QDGKLIVWDSYTTNKVHAIP-LRSSWVMTCAYAPSGSFV-ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFL 152 (340)
Q Consensus 75 ~d~~i~iwd~~~~~~~~~~~-~~~~~i~~v~~~~~~~~l-~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 152 (340)
....|+..++........+. ..-.....+.|.+.+..| .+-...+.|..+++............ .......+.+.
T Consensus 11 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~---~l~~p~glavd 87 (318)
T 3sov_A 11 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS---GLLSPDGLACD 87 (318)
T ss_dssp CEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEE---CCSCCCEEEEE
T ss_pred ccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcC---CCCCccEEEEE
Confidence 34678888887653111111 111235678888865544 44445677887877543211111111 11122234443
Q ss_pred -CCCe-EEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEe--CCCcEEEEECCCCeeeeEe-cCCCC
Q psy15421 153 -DDNQ-IVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGA--CDASAKLWDIRDGSCKQTF-PGHES 227 (340)
Q Consensus 153 -~~~~-l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~--~dg~i~~wd~~~~~~~~~~-~~h~~ 227 (340)
.++. +++-...+.|.++++........+.........+++.|.+..++... ..+.|...++.- .....+ ...-.
T Consensus 88 ~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~~l~ 166 (318)
T 3sov_A 88 WLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIINSEIY 166 (318)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS-CSCEEEECSSCS
T ss_pred cCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC-CCeEEEEECCCC
Confidence 2344 44555678899999875433222223445678999998765555443 357888888753 322222 22234
Q ss_pred CeEEEEEecCC-CEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceee
Q psy15421 228 DINAVTFFPNG-WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERA 305 (340)
Q Consensus 228 ~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~ 305 (340)
..+.++++|++ +.+.+=+..+.|..+|+.......... .. ......+++.. +.++.+-...+.|..++..+++..
T Consensus 167 ~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~-~~-~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~ 242 (318)
T 3sov_A 167 WPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK-GS-LPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGL 242 (318)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SC-CSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSC
T ss_pred CccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEec-CC-CCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCce
Confidence 56899999864 455555667889999987533322221 11 22355666653 456666667788888887665543
No 285
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.94 E-value=0.004 Score=53.31 Aligned_cols=179 Identities=12% Similarity=0.223 Sum_probs=113.8
Q ss_pred CeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCC-------EEE-EEeC--CCcEEEEEC--CCCeeeeEe
Q psy15421 155 NQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMR-------TFV-SGAC--DASAKLWDI--RDGSCKQTF 222 (340)
Q Consensus 155 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~~~-sg~~--dg~i~~wd~--~~~~~~~~~ 222 (340)
..+++....+-+.+||+ .|+.+..+.. +.++.+.+-|+-. +++ +-.. +++|.+|++ .++. +..+
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i 116 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSM 116 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEEC
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeec
Confidence 34666677889999999 7888877653 5677887777421 233 3334 689999966 3443 3333
Q ss_pred cC------CC-CCeEEEEE--ecC-CC-EEEEEeCCCcEEEEeCcC-------CcEEEEeecCCcccceEEEEEcCCCcE
Q psy15421 223 PG------HE-SDINAVTF--FPN-GW-AFATGSDDATCRLFDIRA-------DQELAMYSHDNIICGITSVAFSRSGRL 284 (340)
Q Consensus 223 ~~------h~-~~v~~v~~--~~~-~~-~l~s~s~d~~i~iwd~~~-------~~~~~~~~~~~~~~~i~~~~~s~~~~~ 284 (340)
.. .. ..+..+++ +|. +. +++....+|.+..|++.. .+.+..+... ..+-.|+..+....
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg---sq~EgcvvDd~~g~ 193 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN---SQTEGMAADDEYGR 193 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS---SCEEEEEEETTTTE
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC---CCcceEEEcCCCCe
Confidence 11 11 44566777 664 43 677788889999998832 2333444332 34778899999999
Q ss_pred EEEEeCCCcEEEEeCC-----Cceeeeeec-cCC-cceEEEEE--CCCCC-EEEEee-CCCcEEecC
Q psy15421 285 LLAGYDDFNCNVWDSM-----KTERAGILA-GHD-NRVSCLGV--TEDGM-AVATGS-WDSFLRIWN 340 (340)
Q Consensus 285 l~~g~~d~~i~iw~~~-----~~~~~~~~~-~h~-~~i~~~~~--s~d~~-~l~s~s-~D~~i~iW~ 340 (340)
|..+-.+..|..++.. +...+.... +|. ..+..|++ .++++ +|+.++ .+.+..|||
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vyd 260 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYD 260 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEE
Confidence 9999998776666643 234444432 333 36777877 56666 555554 466666664
No 286
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.93 E-value=0.0079 Score=51.53 Aligned_cols=195 Identities=12% Similarity=0.254 Sum_probs=119.7
Q ss_pred CCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCC----CC---EEEEEe-C--CCeEEEEEccCCCCceEE
Q psy15421 66 DSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPS----GS---FVACGG-L--DNICSIYSLKTREGNVRV 135 (340)
Q Consensus 66 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~----~~---~l~~~~-~--d~~v~i~~~~~~~~~~~~ 135 (340)
...+++.....+-+.++|+ +++.+..++. ..+..+...|+ |+ ++++.. . ++++.+|++......+..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 3456887888899999999 8888888764 44666666553 22 233333 3 589999988533322222
Q ss_pred EEee--c--CCCcceEEEEE--cC-CC--eEEEEeCCCeEEEEECC---C----CceEEEEecCCCCeEEEEEcCCCCEE
Q psy15421 136 SREL--P--GHTGYLSCCRF--LD-DN--QIVTSSGDMSCALWDIE---T----GQQCASFIGHTGDVMSLSLAPDMRTF 199 (340)
Q Consensus 136 ~~~~--~--~~~~~v~~~~~--~~-~~--~l~~~~~d~~v~iwd~~---~----~~~~~~~~~~~~~v~~~~~~~~~~~~ 199 (340)
.... + ........+++ .+ .+ +++....++.+..|++. . .+.++++. ..+.+-.+...+....+
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~~g~L 194 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDEYGRL 194 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETTTTEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCCCCeE
Confidence 1110 1 11022333333 33 34 35666778999999883 2 23445544 34568888899988899
Q ss_pred EEEeCCCcEEEEECC-----CCeeeeEec-CCC-CCeEEEEEe--cCCC-EEEEEe-CCCcEEEEeCc-CCcEEEEe
Q psy15421 200 VSGACDASAKLWDIR-----DGSCKQTFP-GHE-SDINAVTFF--PNGW-AFATGS-DDATCRLFDIR-ADQELAMY 264 (340)
Q Consensus 200 ~sg~~dg~i~~wd~~-----~~~~~~~~~-~h~-~~v~~v~~~--~~~~-~l~s~s-~d~~i~iwd~~-~~~~~~~~ 264 (340)
+.+-.|.-|..++.+ +++.+..+. ++- ..+..|++. ++++ +|++++ .+.+..+||.. ..+.+..+
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 999998777777754 344444442 222 368888885 4444 555444 57799999996 55555555
No 287
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.91 E-value=0.0076 Score=50.70 Aligned_cols=227 Identities=17% Similarity=0.191 Sum_probs=109.9
Q ss_pred CCeEEEEe-CC-----CeEEEEeCCCCCeeEE--eeCCCCcEEEEEECCCCCEEEEEeCC-----CeEEEEEccCCCC-c
Q psy15421 67 SRNLVSAS-QD-----GKLIVWDSYTTNKVHA--IPLRSSWVMTCAYAPSGSFVACGGLD-----NICSIYSLKTREG-N 132 (340)
Q Consensus 67 ~~~l~s~~-~d-----~~i~iwd~~~~~~~~~--~~~~~~~i~~v~~~~~~~~l~~~~~d-----~~v~i~~~~~~~~-~ 132 (340)
+..++.|+ .+ ..+.++|..+.+.... ++........+ ..++..++.|+.+ +.+.+||..+... .
T Consensus 15 ~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 15 EVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASV--SLHDRIYVIGGYDGRSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp EEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEE--EETTEEEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred CEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEE--EECCEEEEEcCCCCCccCceEEEEECCCCCCCe
Confidence 34555555 22 3678888876653221 11111111122 2356777777765 3577888765431 1
Q ss_pred eEEEEeecCCCcceEEEEEcCCCeEEEEeCC-----CeEEEEECCCCceEE--EEecCCCCeEEEEEcCCCCEEEEEeCC
Q psy15421 133 VRVSRELPGHTGYLSCCRFLDDNQIVTSSGD-----MSCALWDIETGQQCA--SFIGHTGDVMSLSLAPDMRTFVSGACD 205 (340)
Q Consensus 133 ~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~sg~~d 205 (340)
......++........+. .++..++.|+.+ ..+.+||+.+++-.. .+....... +++. .+++.++.|+.+
T Consensus 93 W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~ 169 (301)
T 2vpj_A 93 WYSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGA-GLVV-ASGVIYCLGGYD 169 (301)
T ss_dssp CEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSC-EEEE-ETTEEEEECCBC
T ss_pred eEECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccc-eEEE-ECCEEEEECCCC
Confidence 332222222222222222 233344555432 368889987765322 211111111 2222 256677777754
Q ss_pred -----CcEEEEECCCCeeeeE--ecCCCCCeEEEEEecCCCEEEEEeCC-----CcEEEEeCcCCcEEEEeecCCcccce
Q psy15421 206 -----ASAKLWDIRDGSCKQT--FPGHESDINAVTFFPNGWAFATGSDD-----ATCRLFDIRADQELAMYSHDNIICGI 273 (340)
Q Consensus 206 -----g~i~~wd~~~~~~~~~--~~~h~~~v~~v~~~~~~~~l~s~s~d-----~~i~iwd~~~~~~~~~~~~~~~~~~i 273 (340)
..+..||+.+++-... ++.......++. -++..++.|+.+ ..+.+||..+.+=...-.........
T Consensus 170 ~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~ 247 (301)
T 2vpj_A 170 GLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYV 247 (301)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSC
T ss_pred CCcccceEEEEeCCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccce
Confidence 4688899887653221 111111112222 256777888764 46889998765322111111111112
Q ss_pred EEEEEcCCCcEEEEEeCC-----CcEEEEeCCCc
Q psy15421 274 TSVAFSRSGRLLLAGYDD-----FNCNVWDSMKT 302 (340)
Q Consensus 274 ~~~~~s~~~~~l~~g~~d-----~~i~iw~~~~~ 302 (340)
.++.+ ++++++.|+.+ ..+.+||..+.
T Consensus 248 ~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 248 GATVL--RGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp EEEEE--TTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred eEEEE--CCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 23333 67888888765 35677886543
No 288
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.87 E-value=0.0014 Score=55.61 Aligned_cols=155 Identities=10% Similarity=0.064 Sum_probs=100.9
Q ss_pred CCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeeee-EecC----CCC--CeEEEEE---ecCCCEEEEEe-------
Q psy15421 184 TGDVMSLSLAPDMRTFVSGA-CDASAKLWDIRDGSCKQ-TFPG----HES--DINAVTF---FPNGWAFATGS------- 245 (340)
Q Consensus 184 ~~~v~~~~~~~~~~~~~sg~-~dg~i~~wd~~~~~~~~-~~~~----h~~--~v~~v~~---~~~~~~l~s~s------- 245 (340)
....-+.+|++....|+.++ ..++|..||...+.... .+++ ... .+..|.+ .|+++.+++..
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 33455788988666666656 79999999987554332 2332 111 3578999 68887777543
Q ss_pred ------CCCcEEEEeCc---CCcEEEEeecCC-----------cccceEEEEEcCCCcEEEEEeCC-CcEEEEeCCCcee
Q psy15421 246 ------DDATCRLFDIR---ADQELAMYSHDN-----------IICGITSVAFSRSGRLLLAGYDD-FNCNVWDSMKTER 304 (340)
Q Consensus 246 ------~d~~i~iwd~~---~~~~~~~~~~~~-----------~~~~i~~~~~s~~~~~l~~g~~d-~~i~iw~~~~~~~ 304 (340)
.+..+..+|+. +++.+....... .....+.++..++|+..++++.. +.|...+-. ++.
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd-G~~ 170 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD-GKT 170 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT-SCC
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC-CCE
Confidence 26779999998 666554332111 11247899999999999999888 877776643 332
Q ss_pred eeeec------cCCcceEEEEECCCCCEEEEeeCCCcEEec
Q psy15421 305 AGILA------GHDNRVSCLGVTEDGMAVATGSWDSFLRIW 339 (340)
Q Consensus 305 ~~~~~------~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW 339 (340)
...+. ...-..+.++++|||..|+....++.+...
T Consensus 171 ~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~f 211 (334)
T 2p9w_A 171 VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAF 211 (334)
T ss_dssp EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEE
T ss_pred EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEE
Confidence 22221 112236789999999877766557776543
No 289
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.82 E-value=0.017 Score=52.16 Aligned_cols=235 Identities=12% Similarity=0.072 Sum_probs=131.2
Q ss_pred EEEEEECCC-CC-EEEEEeCCCeEEEEEccCCCCceEEEEeecC-CCcceEEEEE-------cCCCe-EEEEeCCC----
Q psy15421 100 VMTCAYAPS-GS-FVACGGLDNICSIYSLKTREGNVRVSRELPG-HTGYLSCCRF-------LDDNQ-IVTSSGDM---- 164 (340)
Q Consensus 100 i~~v~~~~~-~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~-~~~~v~~~~~-------~~~~~-l~~~~~d~---- 164 (340)
...++|+|. .. ++++-...+.|++.|...+ .+........ .......+.| .+++. ++.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~--~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNR--MLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTT--EEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCC--EEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 457889983 44 4444444456666766432 2222211111 1223566777 66653 65555443
Q ss_pred ---eEEEEECCC-CceE-----EEEecCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECC-------CCee---------
Q psy15421 165 ---SCALWDIET-GQQC-----ASFIGHTGDVMSLSLAPD-MRTFVSGACDASAKLWDIR-------DGSC--------- 218 (340)
Q Consensus 165 ---~v~iwd~~~-~~~~-----~~~~~~~~~v~~~~~~~~-~~~~~sg~~dg~i~~wd~~-------~~~~--------- 218 (340)
.|.+.+... +... ..+.. -.....++++|+ +.++++-..++.|..+|+. ++..
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred cCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 255665433 1211 12221 124567889994 5566677788899999987 4543
Q ss_pred --eeE-ec-CCCCCeEEEEEecCCCE-EEEEeCCCcEEEEeCcCCc-EE---EEe-ec---CC---------cccceE-E
Q psy15421 219 --KQT-FP-GHESDINAVTFFPNGWA-FATGSDDATCRLFDIRADQ-EL---AMY-SH---DN---------IICGIT-S 275 (340)
Q Consensus 219 --~~~-~~-~h~~~v~~v~~~~~~~~-l~s~s~d~~i~iwd~~~~~-~~---~~~-~~---~~---------~~~~i~-~ 275 (340)
... +. +.......++|+|+|.+ +++=+....|+.++..... .+ ..+ .. .. ...... .
T Consensus 298 g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 298 NTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp TTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred cccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 111 11 12334578999999985 5555667788886654211 11 111 11 10 111244 3
Q ss_pred EEEc-------CCCcEEEEEeCCCcEEEEeCCCceeeeeeccC------------------------CcceEEEEECCC-
Q psy15421 276 VAFS-------RSGRLLLAGYDDFNCNVWDSMKTERAGILAGH------------------------DNRVSCLGVTED- 323 (340)
Q Consensus 276 ~~~s-------~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h------------------------~~~i~~~~~s~d- 323 (340)
++.. +++.++++=..+..|+.++ .++. +.++.+. -..-..|++.++
T Consensus 378 v~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~ 455 (496)
T 3kya_A 378 VFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVK 455 (496)
T ss_dssp EEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTT
T ss_pred EEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCC
Confidence 4444 5677777777888999998 4553 3333221 123578999997
Q ss_pred CCEEEEeeCCCcEEec
Q psy15421 324 GMAVATGSWDSFLRIW 339 (340)
Q Consensus 324 ~~~l~s~s~D~~i~iW 339 (340)
|.++++=+.+..||.+
T Consensus 456 g~lyVaD~~N~rIrki 471 (496)
T 3kya_A 456 EMFYVHDQVGHTIRTI 471 (496)
T ss_dssp TEEEEEETTTTEEEEE
T ss_pred CEEEEEeCCCCEEEEE
Confidence 8877777777888764
No 290
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.81 E-value=0.023 Score=53.18 Aligned_cols=277 Identities=7% Similarity=-0.064 Sum_probs=137.8
Q ss_pred CcEEEEEEcCCCC-eEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCC--CeEEEEEccCCCCc
Q psy15421 56 AKIYAMHWGSDSR-NLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLD--NICSIYSLKTREGN 132 (340)
Q Consensus 56 ~~v~~~~~s~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d--~~v~i~~~~~~~~~ 132 (340)
.....+++.+.+. ++++-...+.|.+.+.........+...-.....+++.|.+.+|+..... ..|...++.. ..
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG--~~ 161 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG--SS 161 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS--CS
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC--Cc
Confidence 5678899998554 55566677899999987554333332223345678898876665555543 3444444432 21
Q ss_pred eEEEEeecCCCcceEEEEEcC-CCeEEEE-eCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q psy15421 133 VRVSRELPGHTGYLSCCRFLD-DNQIVTS-SGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKL 210 (340)
Q Consensus 133 ~~~~~~~~~~~~~v~~~~~~~-~~~l~~~-~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~ 210 (340)
..... ...-..-..+.+.. ++.|.-+ ...+.|...|+..........+.......+++..+ ..+.+-...+.|..
T Consensus 162 ~~~l~--~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~ 238 (619)
T 3s94_A 162 RFIII--NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILA 238 (619)
T ss_dssp CEEEE--CSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEE
T ss_pred eEEEE--eCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEE
Confidence 11111 11122234455543 3454433 44677888888654332222212233456777655 55556667888999
Q ss_pred EECCCCeeeeEecCCCCCe---------------------------EEE---------EEecCC--------------CE
Q psy15421 211 WDIRDGSCKQTFPGHESDI---------------------------NAV---------TFFPNG--------------WA 240 (340)
Q Consensus 211 wd~~~~~~~~~~~~h~~~v---------------------------~~v---------~~~~~~--------------~~ 240 (340)
.|..+++....+....... .|+ +..|.| ..
T Consensus 239 ~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~ 318 (619)
T 3s94_A 239 CNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATE 318 (619)
T ss_dssp EESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSE
T ss_pred EECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCce
Confidence 9887664332221100000 111 011111 11
Q ss_pred EEEEeCCCcEEEEeCcCCcEE-EEeecCCcccceEEEEEcCCC-cEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEE
Q psy15421 241 FATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCL 318 (340)
Q Consensus 241 l~s~s~d~~i~iwd~~~~~~~-~~~~~~~~~~~i~~~~~s~~~-~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~ 318 (340)
++.-+..+.|+..++...... ..+.... ...+.+++|++.+ .++++-...+.|+.++...................+
T Consensus 319 ~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~-l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~Gl 397 (619)
T 3s94_A 319 LLLLARRTDLRRISLDTPDFTDIVLQLED-IRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGI 397 (619)
T ss_dssp EEEEEESSCEEEEESSSTTCCCEECCCSC-CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE
T ss_pred EEEEEcccceEEEecCCCccceeEEeccc-cCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCce
Confidence 111222344555555432211 1111111 1236789999854 455555567888888865433333333334566778
Q ss_pred EECCC-CCEEEEeeCCCcEEe
Q psy15421 319 GVTED-GMAVATGSWDSFLRI 338 (340)
Q Consensus 319 ~~s~d-~~~l~s~s~D~~i~i 338 (340)
++... ++.+++-+..+.|.+
T Consensus 398 AvD~~~~~lY~tD~~~~~I~v 418 (619)
T 3s94_A 398 AVDWVARNLYWTDTGTDRIEV 418 (619)
T ss_dssp EEETTTTEEEEEETTTTEEEE
T ss_pred EEecccCcEEEEeCCCCcEEE
Confidence 88764 444444444455543
No 291
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.80 E-value=0.012 Score=49.98 Aligned_cols=213 Identities=12% Similarity=-0.007 Sum_probs=117.8
Q ss_pred CeEEEEEccCCCCceEEEEeecCCCcceEEEEEcC-CCeEE-EEeCCCeEEEEECCC---CceEEEEe-cCCCCeEEEEE
Q psy15421 119 NICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQIV-TSSGDMSCALWDIET---GQQCASFI-GHTGDVMSLSL 192 (340)
Q Consensus 119 ~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~-~~~~d~~v~iwd~~~---~~~~~~~~-~~~~~v~~~~~ 192 (340)
+.|+..++...... ..++. ......+.|.. ++.+. +-..++.|..+++.. +.....+. .....+..+++
T Consensus 10 ~~I~~i~~~~~~~~----~~~~~-~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glav 84 (316)
T 1ijq_A 10 HEVRKMTLDRSEYT----SLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 84 (316)
T ss_dssp SSEEEEETTSCCCE----EEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEE
T ss_pred CeEEEEECCCcceE----ehhcC-CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEE
Confidence 44677777654311 11222 22344566654 44444 445578899999875 12222222 22235678999
Q ss_pred cCCC-CEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCC-EEEEEeCC-CcEEEEeCcCCcEEEEeecCCc
Q psy15421 193 APDM-RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW-AFATGSDD-ATCRLFDIRADQELAMYSHDNI 269 (340)
Q Consensus 193 ~~~~-~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d-~~i~iwd~~~~~~~~~~~~~~~ 269 (340)
.+.+ +++++-...+.|.+.++........+.........++++|.+. .+.+-... +.|...++....... +....
T Consensus 85 d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~-~~~~~- 162 (316)
T 1ijq_A 85 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS-LVTEN- 162 (316)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE-EECSS-
T ss_pred eecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEE-EEECC-
Confidence 8754 4555656789999999875433333333345678999998554 44454333 688888876443322 21112
Q ss_pred ccceEEEEEcCCCcEEEEE-eCCCcEEEEeCCCceeeeeec--cCCcceEEEEECCCCCEEEEeeCCCcEEec
Q psy15421 270 ICGITSVAFSRSGRLLLAG-YDDFNCNVWDSMKTERAGILA--GHDNRVSCLGVTEDGMAVATGSWDSFLRIW 339 (340)
Q Consensus 270 ~~~i~~~~~s~~~~~l~~g-~~d~~i~iw~~~~~~~~~~~~--~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW 339 (340)
....+.++++|++..|..+ ...+.|..++........... ........+++. .+..+++-...+.|...
T Consensus 163 ~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~ 234 (316)
T 1ijq_A 163 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSA 234 (316)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred CCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEE
Confidence 2347889999876655544 456789999965322222222 122345566664 34555555555666543
No 292
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.78 E-value=0.014 Score=49.90 Aligned_cols=226 Identities=12% Similarity=0.018 Sum_probs=119.5
Q ss_pred CcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEe-ecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCce
Q psy15421 98 SWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRE-LPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQ 176 (340)
Q Consensus 98 ~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~ 176 (340)
..+.++.|.+++..++ ++..+.+ |....+......... .......+..+.+.+ +.+..++.++.|.. ....++.
T Consensus 36 ~~~~~v~~~~~~~~~~-~G~~g~i--~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~g~~g~i~~-S~DgG~t 110 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWL-VGVNATL--METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIVGEPPIMLH-TTDGGQS 110 (327)
T ss_dssp SCEEEEEESSSSCEEE-EETTTEE--EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEEEETTEEEE-ESSTTSS
T ss_pred CcEEEEEECCCCcEEE-EcCCCeE--EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEEECCCeEEE-ECCCCCC
Confidence 4578888887777777 4556654 322222222222111 111233566666655 44444455554433 3333332
Q ss_pred EEEEe---cCCCCeEEEEEcCCCCEEEEEeCCCcEE-EEECCCCeeeeE-ecCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q psy15421 177 CASFI---GHTGDVMSLSLAPDMRTFVSGACDASAK-LWDIRDGSCKQT-FPGHESDINAVTFFPNGWAFATGSDDATCR 251 (340)
Q Consensus 177 ~~~~~---~~~~~v~~~~~~~~~~~~~sg~~dg~i~-~wd~~~~~~~~~-~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~ 251 (340)
=.... .+.+.+..+.+.+++..++.+ .+|.|. -.| .++.-.. ..++...+..+++.|++.+++.+...+..+
T Consensus 111 W~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S~D--gG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~ 187 (327)
T 2xbg_A 111 WSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRTKD--SGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYS 187 (327)
T ss_dssp CEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEESS--TTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEE
T ss_pred ceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEEcC--CCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEE
Confidence 12211 233457778777666666554 466543 223 2332222 234456788999999988777665433333
Q ss_pred EEeC--cCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeec----cCCcceEEEEECCCCC
Q psy15421 252 LFDI--RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA----GHDNRVSCLGVTEDGM 325 (340)
Q Consensus 252 iwd~--~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~----~h~~~i~~~~~s~d~~ 325 (340)
-+|- .+.+.+.. .....+..+++.|++.+++. +.+|.+++.+...++....+. .+...+..+++.+++.
T Consensus 188 S~d~gG~tW~~~~~----~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~ 262 (327)
T 2xbg_A 188 TWEPGQTAWEPHNR----TTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNE 262 (327)
T ss_dssp EECTTCSSCEEEEC----CSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSC
T ss_pred EeCCCCCceeECCC----CCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCE
Confidence 3442 22333211 11234788899999877654 467777776322233222221 1234588999998887
Q ss_pred EEEEeeCCCcEE
Q psy15421 326 AVATGSWDSFLR 337 (340)
Q Consensus 326 ~l~s~s~D~~i~ 337 (340)
.++.+. ++.|.
T Consensus 263 ~~~~g~-~g~i~ 273 (327)
T 2xbg_A 263 VWLAGG-AGALL 273 (327)
T ss_dssp EEEEES-TTCEE
T ss_pred EEEEeC-CCeEE
Confidence 777654 66553
No 293
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.76 E-value=0.012 Score=48.35 Aligned_cols=202 Identities=13% Similarity=0.163 Sum_probs=126.1
Q ss_pred EEecCccCcEEEEEEcCCCCeEEE-EeCCCeEEEEeCCCCCeeEEeeCC-CCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Q psy15421 49 RTLRGHLAKIYAMHWGSDSRNLVS-ASQDGKLIVWDSYTTNKVHAIPLR-SSWVMTCAYAPSGSFVACGGLDNICSIYSL 126 (340)
Q Consensus 49 ~~~~~h~~~v~~~~~s~~~~~l~s-~~~d~~i~iwd~~~~~~~~~~~~~-~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~ 126 (340)
+.+.|=.+.+..++|+|++..|++ ...++.|...|.. ++.+..++.. ....-.+++.+++.++++.-.++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 567777778999999998776554 6678889999987 7777777542 245678888999988777667788888888
Q ss_pred cCCCCceE-EEEeec----CCCcceEEEEEcCCC-eEEEEeCCCeEEEEECC---CCceEEEEe-------cCCCCeEEE
Q psy15421 127 KTREGNVR-VSRELP----GHTGYLSCCRFLDDN-QIVTSSGDMSCALWDIE---TGQQCASFI-------GHTGDVMSL 190 (340)
Q Consensus 127 ~~~~~~~~-~~~~~~----~~~~~v~~~~~~~~~-~l~~~~~d~~v~iwd~~---~~~~~~~~~-------~~~~~v~~~ 190 (340)
........ ....++ ........+.|.+.+ .|.++.......+|.+. ....+..+. .+...+.++
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 65432111 111111 122335677887654 66665554444555443 111222221 123357899
Q ss_pred EEcCCCCEEEE-EeCCCcEEEEECCCCeeeeEe--c-CC------CCCeEEEEEecCCCEEEEEeCCCcEEEE
Q psy15421 191 SLAPDMRTFVS-GACDASAKLWDIRDGSCKQTF--P-GH------ESDINAVTFFPNGWAFATGSDDATCRLF 253 (340)
Q Consensus 191 ~~~~~~~~~~s-g~~dg~i~~wd~~~~~~~~~~--~-~h------~~~v~~v~~~~~~~~l~s~s~d~~i~iw 253 (340)
+++|....++. ....+.+..+|.+ ++.+..+ . +. -.....|+|.|+|+.+++ +.-..++.|
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f 249 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRF 249 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEE
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEE
Confidence 99997665554 5556778889865 5544433 2 11 124679999999986666 555555444
No 294
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.76 E-value=0.017 Score=50.06 Aligned_cols=225 Identities=14% Similarity=0.134 Sum_probs=117.9
Q ss_pred cCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCee--EEee---CCCCcEEEEEECCC---CCEEEEEeC-C-----Ce
Q psy15421 55 LAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKV--HAIP---LRSSWVMTCAYAPS---GSFVACGGL-D-----NI 120 (340)
Q Consensus 55 ~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~--~~~~---~~~~~i~~v~~~~~---~~~l~~~~~-d-----~~ 120 (340)
...-..++|.|+++++++ ..++.|++++ +++.. ..++ ........++++|+ +..|+.+.. . +.
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 344579999999986655 5669999998 33321 1121 11345789999998 455444433 2 55
Q ss_pred EEEEEccCCCC-ce-EEEEeec---CCCcceEEEEEcCCCeEEEEeCC--------------CeEEEEECCCC-------
Q psy15421 121 CSIYSLKTREG-NV-RVSRELP---GHTGYLSCCRFLDDNQIVTSSGD--------------MSCALWDIETG------- 174 (340)
Q Consensus 121 v~i~~~~~~~~-~~-~~~~~~~---~~~~~v~~~~~~~~~~l~~~~~d--------------~~v~iwd~~~~------- 174 (340)
|..++.....- .. .+...++ +....-..+.|.+++.|..+.++ +.|.-++....
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf 186 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPF 186 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcc
Confidence 66666643210 11 1222233 11111235677777765554332 45555555430
Q ss_pred -----ceEEEE-ecCCCCeEEEEEcC-CCCEEEEEeCCCc--------EEEEECCCCe------------------eeeE
Q psy15421 175 -----QQCASF-IGHTGDVMSLSLAP-DMRTFVSGACDAS--------AKLWDIRDGS------------------CKQT 221 (340)
Q Consensus 175 -----~~~~~~-~~~~~~v~~~~~~~-~~~~~~sg~~dg~--------i~~wd~~~~~------------------~~~~ 221 (340)
.....+ .++ .....++|+| ++.++++-...+. |.+.. .+. ....
T Consensus 187 ~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~ 263 (352)
T 2ism_A 187 LGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIV--PGGNYGWPRVVGRGNDPRYRDPLYF 263 (352)
T ss_dssp TTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEE
T ss_pred cCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEec--cCCcCCCCcccCCCCCCCCcCCeEe
Confidence 011111 122 2356789999 6666665333332 43332 221 1222
Q ss_pred ecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcE------EEEeecCCcccceEEEEEcCCCcEEEEEe
Q psy15421 222 FPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE------LAMYSHDNIICGITSVAFSRSGRLLLAGY 289 (340)
Q Consensus 222 ~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~------~~~~~~~~~~~~i~~~~~s~~~~~l~~g~ 289 (340)
+..| .....++| .+|..+++....+.|...++..... ...+. .....+..+++.|||.++++..
T Consensus 264 ~~~~-~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~--~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 264 WPQG-FPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL--SGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp CTTC-CCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE--ESSCCEEEEEECTTSCEEEEEC
T ss_pred cCCC-CCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheec--ccCCCeeEEEECCCCcEEEEEe
Confidence 3222 34567777 4676777666667777777653321 11111 1123578999999998777654
No 295
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.68 E-value=0.012 Score=49.49 Aligned_cols=215 Identities=13% Similarity=0.168 Sum_probs=102.3
Q ss_pred CeEEEEeCCCCCeeEE--eeCCCCcEEEEEECCCCCEEEEEeCC-----CeEEEEEccCCCCceEEEEeecCCCcceEEE
Q psy15421 77 GKLIVWDSYTTNKVHA--IPLRSSWVMTCAYAPSGSFVACGGLD-----NICSIYSLKTREGNVRVSRELPGHTGYLSCC 149 (340)
Q Consensus 77 ~~i~iwd~~~~~~~~~--~~~~~~~i~~v~~~~~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~ 149 (340)
..+..+|..+.+.... ++.....-..+. .++..++.|+.+ +.+.+||..+. .......++........+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~ 105 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVY--MAGLVFAVGGFNGSLRVRTVDSYDPVKD--QWTSVANMRDRRSTLGAA 105 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEESCBCSSSBCCCEEEEETTTT--EEEEECCCSSCCBSCEEE
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEE--ECCEEEEEeCcCCCccccceEEECCCCC--ceeeCCCCCccccceEEE
Confidence 3577788776543222 111111111222 267777777755 34677776543 232222222211112222
Q ss_pred EEcCCCeEEEEeCCC-----eEEEEECCCCceEEE--EecCCCCeEEEEEcCCCCEEEEEeCC-------CcEEEEECCC
Q psy15421 150 RFLDDNQIVTSSGDM-----SCALWDIETGQQCAS--FIGHTGDVMSLSLAPDMRTFVSGACD-------ASAKLWDIRD 215 (340)
Q Consensus 150 ~~~~~~~l~~~~~d~-----~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~sg~~d-------g~i~~wd~~~ 215 (340)
. .++..++.|+.++ .+.+||+.+++-... +....... +++. .+++.++.|+.+ ..+..||+.+
T Consensus 106 ~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~ 182 (302)
T 2xn4_A 106 V-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSV-GVGV-VGGLLYAVGGYDVASRQCLSTVECYNATT 182 (302)
T ss_dssp E-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEECCEETTTTEECCCEEEEETTT
T ss_pred E-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCc-eEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCC
Confidence 2 2444455555442 477888877642221 11111111 2222 256667776643 4588899887
Q ss_pred Ceeee--EecCCCCCeEEEEEecCCCEEEEEeCC-----CcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEE
Q psy15421 216 GSCKQ--TFPGHESDINAVTFFPNGWAFATGSDD-----ATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAG 288 (340)
Q Consensus 216 ~~~~~--~~~~h~~~v~~v~~~~~~~~l~s~s~d-----~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g 288 (340)
++-.. .++...... +++. -++..++.|+.+ ..+.+||..+.+=...-........-..+.+ ++++++.|
T Consensus 183 ~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~G 258 (302)
T 2xn4_A 183 NEWTYIAEMSTRRSGA-GVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGLLYVVG 258 (302)
T ss_dssp TEEEEECCCSSCCBSC-EEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred CcEEECCCCccccccc-cEEE-ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCEEEEEC
Confidence 65222 122111111 2222 257788888764 3688999876432111111111111122222 67888888
Q ss_pred eCCC-----cEEEEeCCCc
Q psy15421 289 YDDF-----NCNVWDSMKT 302 (340)
Q Consensus 289 ~~d~-----~i~iw~~~~~ 302 (340)
+.++ .+.+||..+.
T Consensus 259 G~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 259 GDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp CBCSSSBCCCEEEEETTTT
T ss_pred CcCCCcccccEEEEcCCCC
Confidence 7653 4788887654
No 296
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.67 E-value=0.03 Score=50.60 Aligned_cols=241 Identities=6% Similarity=0.005 Sum_probs=137.5
Q ss_pred EEEEEEcCC--CCeEEEEeCCCeEEEEeCCCCCeeEEeeCC---CCcEEEEEE-------CCCCCEEEEEeCCC-----e
Q psy15421 58 IYAMHWGSD--SRNLVSASQDGKLIVWDSYTTNKVHAIPLR---SSWVMTCAY-------APSGSFVACGGLDN-----I 120 (340)
Q Consensus 58 v~~~~~s~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~---~~~i~~v~~-------~~~~~~l~~~~~d~-----~ 120 (340)
-..|+|+|. ++++++-...+.|++.|..++......... -.....++| ++++.+|+.+...+ .
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 468999983 445555555577888998776654433321 124788999 99999766666554 2
Q ss_pred --EEEEEccCCCCce------EEEEeecCCCcceEEEEEcC-CCe-EEEEeCCCeEEEEECC-------CCce-------
Q psy15421 121 --CSIYSLKTREGNV------RVSRELPGHTGYLSCCRFLD-DNQ-IVTSSGDMSCALWDIE-------TGQQ------- 176 (340)
Q Consensus 121 --v~i~~~~~~~~~~------~~~~~~~~~~~~v~~~~~~~-~~~-l~~~~~d~~v~iwd~~-------~~~~------- 176 (340)
+.+.+... .+.. ...... .|.. .+...+ ++. +++-..++.|..+|+. ++..
T Consensus 221 ~~V~~i~r~~-~G~~~~~~~~~~v~~~-~~p~---giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~ 295 (496)
T 3kya_A 221 PSVYIIKRNA-DGTFDDRSDIQLIAAY-KQCN---GATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKN 295 (496)
T ss_dssp EEEEEEECCT-TSCCSTTSCEEEEEEE-SCCC---CEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGG
T ss_pred ceEEEEecCC-CCceeecccceeeccC-CCce---EEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccc
Confidence 44444222 1121 111121 2222 233444 445 4455568889999997 4443
Q ss_pred ----EEEEe--cCCCCeEEEEEcCCCCE-EEEEeCCCcEEEEEC--CCCeee--eEecC------CC---------CCeE
Q psy15421 177 ----CASFI--GHTGDVMSLSLAPDMRT-FVSGACDASAKLWDI--RDGSCK--QTFPG------HE---------SDIN 230 (340)
Q Consensus 177 ----~~~~~--~~~~~v~~~~~~~~~~~-~~sg~~dg~i~~wd~--~~~~~~--~~~~~------h~---------~~v~ 230 (340)
...+. +.......++|+|+++. +++=...+.|+.++. ..+... ..+.+ .. ....
T Consensus 296 ~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~ 375 (496)
T 3kya_A 296 NPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPC 375 (496)
T ss_dssp CTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEE
T ss_pred cccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCe
Confidence 12222 22344689999999995 555566788988654 333210 11211 10 1233
Q ss_pred -EEEEe-------cCCCEEEEEeCCCcEEEEeCcCCcEEEEeecC---------------C------cccceEEEEEcCC
Q psy15421 231 -AVTFF-------PNGWAFATGSDDATCRLFDIRADQELAMYSHD---------------N------IICGITSVAFSRS 281 (340)
Q Consensus 231 -~v~~~-------~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~---------------~------~~~~i~~~~~s~~ 281 (340)
.++.. +++.++++=.....|+.++. .+......... . .......++++++
T Consensus 376 ~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~ 454 (496)
T 3kya_A 376 QGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDV 454 (496)
T ss_dssp EEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETT
T ss_pred EEEEEccccccccCCCeEEEEECCCCEEEEEeC-CCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECC
Confidence 45554 45667777777888998884 33322221110 0 1123678999996
Q ss_pred -CcEEEEEeCCCcEEEEeCCCcee
Q psy15421 282 -GRLLLAGYDDFNCNVWDSMKTER 304 (340)
Q Consensus 282 -~~~l~~g~~d~~i~iw~~~~~~~ 304 (340)
+.++++=..+..|+.++......
T Consensus 455 ~g~lyVaD~~N~rIrki~~~~~~~ 478 (496)
T 3kya_A 455 KEMFYVHDQVGHTIRTISMEQEEN 478 (496)
T ss_dssp TTEEEEEETTTTEEEEEEECCCC-
T ss_pred CCEEEEEeCCCCEEEEEECCCCcc
Confidence 77777777788899888654433
No 297
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.63 E-value=0.022 Score=47.94 Aligned_cols=222 Identities=9% Similarity=0.076 Sum_probs=108.7
Q ss_pred eEEEEeC--CCeEEEEeCCCCCeeEE--eeCCCCcEEEEEECCCCCEEEEEeCC----CeEEEEEccCCCCceEEEEeec
Q psy15421 69 NLVSASQ--DGKLIVWDSYTTNKVHA--IPLRSSWVMTCAYAPSGSFVACGGLD----NICSIYSLKTREGNVRVSRELP 140 (340)
Q Consensus 69 ~l~s~~~--d~~i~iwd~~~~~~~~~--~~~~~~~i~~v~~~~~~~~l~~~~~d----~~v~i~~~~~~~~~~~~~~~~~ 140 (340)
+++.||. ...+.+||..+.+.... ++........+. .++.+++.|+.+ +.+.+||..+. .......++
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~--~W~~~~~~p 89 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKD--SWYSKLGPP 89 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTT--EEEEEECCS
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCC--eEEECCCCC
Confidence 4445554 35688888877653322 111111112222 366777778765 56777777543 233222232
Q ss_pred CCCcceEEEEEcCCCeEEEEeCC------CeEEEEECCCCceEEE--EecCCCCeEEEEEcCCCCEEEEEeC--------
Q psy15421 141 GHTGYLSCCRFLDDNQIVTSSGD------MSCALWDIETGQQCAS--FIGHTGDVMSLSLAPDMRTFVSGAC-------- 204 (340)
Q Consensus 141 ~~~~~v~~~~~~~~~~l~~~~~d------~~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~sg~~-------- 204 (340)
........+. .++..++.|+.+ ..+.+||+.+++-... +....... +++. .++++++.|+.
T Consensus 90 ~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~ 166 (306)
T 3ii7_A 90 TPRDSLAACA-AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSH-GMVE-ANGLIYVCGGSLGNNVSGR 166 (306)
T ss_dssp SCCBSCEEEE-ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEECCEESCTTTCE
T ss_pred ccccceeEEE-ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCccee-EEEE-ECCEEEEECCCCCCCCccc
Confidence 2121122222 234445555544 4588999887643221 11111111 2222 25666666664
Q ss_pred -CCcEEEEECCCCeeee--EecCCCCCeEEEEEecCCCEEEEEeCC-----CcEEEEeCcCCcEEEEee-cCCcccceEE
Q psy15421 205 -DASAKLWDIRDGSCKQ--TFPGHESDINAVTFFPNGWAFATGSDD-----ATCRLFDIRADQELAMYS-HDNIICGITS 275 (340)
Q Consensus 205 -dg~i~~wd~~~~~~~~--~~~~h~~~v~~v~~~~~~~~l~s~s~d-----~~i~iwd~~~~~~~~~~~-~~~~~~~i~~ 275 (340)
-..+..||+.+.+-.. .++.....- +++.. +++.++.|+.+ ..+.+||..+.+= .... .........+
T Consensus 167 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~ 243 (306)
T 3ii7_A 167 VLNSCEVYDPATETWTELCPMIEARKNH-GLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEW-KMVSPMPWKGVTVKC 243 (306)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSC-EEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEE-EECCCCSCCBSCCEE
T ss_pred ccceEEEeCCCCCeEEECCCccchhhcc-eEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcE-EECCCCCCCccceeE
Confidence 3458899988764221 111111111 22222 56777777654 3578888876431 1111 1111112233
Q ss_pred EEEcCCCcEEEEEeCC-----CcEEEEeCCCc
Q psy15421 276 VAFSRSGRLLLAGYDD-----FNCNVWDSMKT 302 (340)
Q Consensus 276 ~~~s~~~~~l~~g~~d-----~~i~iw~~~~~ 302 (340)
+.+ ++++++.|+.+ ..+.+||..+.
T Consensus 244 ~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 244 AAV--GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp EEE--TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred EEE--CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 333 67888888854 46788887653
No 298
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.61 E-value=0.047 Score=51.17 Aligned_cols=225 Identities=8% Similarity=-0.043 Sum_probs=130.4
Q ss_pred eCCCeEEEEeCCCCCeeEEeeCC-CCcEEEEEECCCCCEEEEE-eCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEE
Q psy15421 74 SQDGKLIVWDSYTTNKVHAIPLR-SSWVMTCAYAPSGSFVACG-GLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF 151 (340)
Q Consensus 74 ~~d~~i~iwd~~~~~~~~~~~~~-~~~i~~v~~~~~~~~l~~~-~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 151 (340)
+..+.|+.-++.+.+....++.. -..+..++|.+.+..++.+ ..++.|..+++.... ... .+.........+.+
T Consensus 12 s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~--~~~--v~~~g~~~P~GlAv 87 (628)
T 4a0p_A 12 SRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSA--LEH--VVEFGLDYPEGMAV 87 (628)
T ss_dssp EETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS--CEE--EECSSCSCCCEEEE
T ss_pred EeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCC--cEE--EEeCCCCCcceEEE
Confidence 35668888888766544444322 2457789999876665544 456777777765322 111 11111112233444
Q ss_pred c-CCC-eEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEe--CCCcEEEEECCCCeeeeEecCCCC
Q psy15421 152 L-DDN-QIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGA--CDASAKLWDIRDGSCKQTFPGHES 227 (340)
Q Consensus 152 ~-~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~--~dg~i~~wd~~~~~~~~~~~~h~~ 227 (340)
. ..+ .+.+-...+.|.+.++........+...-.....+++.|....++... ..+.|...++.-.. ...+-....
T Consensus 88 D~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~~~~~ 166 (628)
T 4a0p_A 88 DWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLVPNVG 166 (628)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSCS
T ss_pred EeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEECCCC
Confidence 3 233 345555678899999875433222223445688999998655554433 35678878875433 233322345
Q ss_pred CeEEEEEecCCC-EEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeee
Q psy15421 228 DINAVTFFPNGW-AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG 306 (340)
Q Consensus 228 ~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~ 306 (340)
..+.|++++++. .+.+=...+.|...|+............ .....+++.. +.++++-...+.|...|..+++...
T Consensus 167 ~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l---~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~ 242 (628)
T 4a0p_A 167 RANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDL---PHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRT 242 (628)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECC---SCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCE
T ss_pred CcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccC---CCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceE
Confidence 678999999755 4455566788999998754332211111 1245677765 5666666667888888866665433
Q ss_pred e
Q psy15421 307 I 307 (340)
Q Consensus 307 ~ 307 (340)
.
T Consensus 243 ~ 243 (628)
T 4a0p_A 243 I 243 (628)
T ss_dssp E
T ss_pred E
Confidence 3
No 299
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.57 E-value=0.026 Score=47.47 Aligned_cols=214 Identities=12% Similarity=0.143 Sum_probs=101.5
Q ss_pred CCEEEEEeCC--CeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCC----CeEEEEECCCCceEEE--E
Q psy15421 109 GSFVACGGLD--NICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGD----MSCALWDIETGQQCAS--F 180 (340)
Q Consensus 109 ~~~l~~~~~d--~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d----~~v~iwd~~~~~~~~~--~ 180 (340)
+.+++.|+.+ +.+.+||..+. .......++.....-..+. .++..++.|+.+ ..+.+||+.+++-... +
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~ 88 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDY--SWTDIRCPFEKRRDAACVF-WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGP 88 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTT--EEEECCCCSCCCBSCEEEE-ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECC
T ss_pred ceEEEEeCCCCCceEEEecCCCC--CEecCCCCCcccceeEEEE-ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCC
Confidence 3445556543 45777776543 2222222222111112222 234445555543 5688899887643221 1
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEeCC------CcEEEEECCCCeeee--EecCCCCCeEEEEEecCCCEEEEEeC------
Q psy15421 181 IGHTGDVMSLSLAPDMRTFVSGACD------ASAKLWDIRDGSCKQ--TFPGHESDINAVTFFPNGWAFATGSD------ 246 (340)
Q Consensus 181 ~~~~~~v~~~~~~~~~~~~~sg~~d------g~i~~wd~~~~~~~~--~~~~h~~~v~~v~~~~~~~~l~s~s~------ 246 (340)
.........+. .++++++.|+.+ ..+.+||..+++-.. .++.....- +++. -+++.++.|+.
T Consensus 89 p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~ 164 (306)
T 3ii7_A 89 PTPRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSH-GMVE-ANGLIYVCGGSLGNNVS 164 (306)
T ss_dssp SSCCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEECCEESCTTT
T ss_pred CccccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCccee-EEEE-ECCEEEEECCCCCCCCc
Confidence 11111112222 256677777765 568899988765322 121111111 2222 35677777764
Q ss_pred ---CCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCC-----CcEEEEeCCCce--eeeeeccCCcceE
Q psy15421 247 ---DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD-----FNCNVWDSMKTE--RAGILAGHDNRVS 316 (340)
Q Consensus 247 ---d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d-----~~i~iw~~~~~~--~~~~~~~h~~~i~ 316 (340)
-..+.+||..+.+=...-........-..+.+ ++++++.|+.+ ..+.+||..+.. .+..+........
T Consensus 165 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~ 242 (306)
T 3ii7_A 165 GRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVK 242 (306)
T ss_dssp CEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCE
T ss_pred ccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCcccee
Confidence 34588898876532111111111111222233 67788887754 357888876543 2222222112222
Q ss_pred EEEECCCCCEEEEeeCC
Q psy15421 317 CLGVTEDGMAVATGSWD 333 (340)
Q Consensus 317 ~~~~s~d~~~l~s~s~D 333 (340)
++.+ ++..++.|+.+
T Consensus 243 ~~~~--~~~i~v~GG~~ 257 (306)
T 3ii7_A 243 CAAV--GSIVYVLAGFQ 257 (306)
T ss_dssp EEEE--TTEEEEEECBC
T ss_pred EEEE--CCEEEEEeCcC
Confidence 3333 66677777755
No 300
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.52 E-value=0.033 Score=53.63 Aligned_cols=171 Identities=6% Similarity=-0.050 Sum_probs=104.6
Q ss_pred EEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCC----eeeeEecCCCCCeEE
Q psy15421 157 IVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMR-TFVSGACDASAKLWDIRDG----SCKQTFPGHESDINA 231 (340)
Q Consensus 157 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~sg~~dg~i~~wd~~~~----~~~~~~~~h~~~v~~ 231 (340)
++..+....|+..++...... .+......+..+++.+... ++++-...+.|+.+++... .....+.........
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~~~-~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~G 475 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSEYT-SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 475 (791)
T ss_dssp EEEEECBSSEEEECTTSCCCE-EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred ccccccccceeEeeccCCcce-eeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcce
Confidence 344455667888888765433 3333445678999998554 4555556788998888642 222233323345678
Q ss_pred EEEecCC-CEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEe-CC-CcEEEEeCCCceeeeee
Q psy15421 232 VTFFPNG-WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY-DD-FNCNVWDSMKTERAGIL 308 (340)
Q Consensus 232 v~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~-~d-~~i~iw~~~~~~~~~~~ 308 (340)
|++.+.+ ..+++-...+.|.+.++.......... .. ......++++|.+.+|.... .+ ..|...++.........
T Consensus 476 LAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~-~~-l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv 553 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-EN-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 553 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-CT-TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE
T ss_pred eeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEe-CC-CCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE
Confidence 9999866 566676778899999988654433332 11 22478999999755554443 33 67888886544333334
Q ss_pred ccCCcceEEEEECCCCCEEEEe
Q psy15421 309 AGHDNRVSCLGVTEDGMAVATG 330 (340)
Q Consensus 309 ~~h~~~i~~~~~s~d~~~l~s~ 330 (340)
.......+.|++.+.+..|.-+
T Consensus 554 ~~~l~~P~GLavD~~~~~LYwa 575 (791)
T 3m0c_C 554 TENIQWPNGITLDLLSGRLYWV 575 (791)
T ss_dssp CSSCSCEEEEEEETTTTEEEEE
T ss_pred eCCCCCceEEEEecCCCeEEEE
Confidence 4444677889998765554433
No 301
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.47 E-value=0.11 Score=52.19 Aligned_cols=276 Identities=12% Similarity=0.086 Sum_probs=146.9
Q ss_pred cCcEEEEEEcCC------CCeEEEEeC-CCeEEEEeCCCCCeeEEeeCCC-CcEEE---EEECCCCCEEEEEeCCCeEEE
Q psy15421 55 LAKIYAMHWGSD------SRNLVSASQ-DGKLIVWDSYTTNKVHAIPLRS-SWVMT---CAYAPSGSFVACGGLDNICSI 123 (340)
Q Consensus 55 ~~~v~~~~~s~~------~~~l~s~~~-d~~i~iwd~~~~~~~~~~~~~~-~~i~~---v~~~~~~~~l~~~~~d~~v~i 123 (340)
..+|.|+++.|. .++++.|.. |++++|+++.+.+.+....... ....+ +.+ ....||..|-.||.+..
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~-~~~~~L~igl~dG~l~~ 631 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTF-ESSHYLLCALGDGALFY 631 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEE-TTEEEEEEEETTSEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEe-CCCcEEEEEeCCCeEEE
Confidence 357999999763 367888886 9999999998766665444322 12222 233 34568899999999877
Q ss_pred EEccCCCCceEEEEe-ecCCCcceEEEEEcC-CCeEEEEeCCCeEEEEECCCCceEEEEecCCCCe-EEEEEcCC--CCE
Q psy15421 124 YSLKTREGNVRVSRE-LPGHTGYLSCCRFLD-DNQIVTSSGDMSCALWDIETGQQCASFIGHTGDV-MSLSLAPD--MRT 198 (340)
Q Consensus 124 ~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v-~~~~~~~~--~~~ 198 (340)
+.+....+...-.++ .-| +.++....+.. ++.-+.+.++.-..+|.-+ ++....-... ..+ ....|+.. ...
T Consensus 632 ~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s~l~~-~~v~~~~~F~se~~~~g 708 (1158)
T 3ei3_A 632 FGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFSNVNL-KEVNYMCPLNSDGYPDS 708 (1158)
T ss_dssp EEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEEEBSS-SCCCEEEEECCSSSTTE
T ss_pred EEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEeccCh-HHhceEeccCcccCCCc
Confidence 776543333332222 222 23343333332 2233333445554445433 2222111111 122 23334322 123
Q ss_pred EEEEeCCCcEEEEECCCCe--eeeEecCCCCCeEEEEEecCCCEEEEEeCC-----------------------------
Q psy15421 199 FVSGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFPNGWAFATGSDD----------------------------- 247 (340)
Q Consensus 199 ~~sg~~dg~i~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d----------------------------- 247 (340)
++ +..++.+++..+..-. ..+.++ -...+..++++|..+.++.+..+
T Consensus 709 ~v-~~~~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1158)
T 3ei3_A 709 LA-LANNSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSS 786 (1158)
T ss_dssp EE-EECSSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCC
T ss_pred EE-EEcCCceEEEEecccCCeeEEEEe-CCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhccccc
Confidence 44 3445679988775322 223333 34567788888876655443311
Q ss_pred --------------------CcEEEEeCcCCcEEEEeecCCc--ccceEEEEEcCC-CcEEEEEe----------CCCcE
Q psy15421 248 --------------------ATCRLFDIRADQELAMYSHDNI--ICGITSVAFSRS-GRLLLAGY----------DDFNC 294 (340)
Q Consensus 248 --------------------~~i~iwd~~~~~~~~~~~~~~~--~~~i~~~~~s~~-~~~l~~g~----------~d~~i 294 (340)
..|++.|-.+.+.+..+..+.. ...+..+.|..+ ..++++|+ ..|.|
T Consensus 787 ~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri 866 (1158)
T 3ei3_A 787 KLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRI 866 (1158)
T ss_dssp CCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEE
T ss_pred ccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEE
Confidence 2356666666655544432222 222444445433 47888887 34789
Q ss_pred EEEeCCCceeeeeec--cCCcceEEEEECCCCCEEEEeeCCCcEEecC
Q psy15421 295 NVWDSMKTERAGILA--GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340 (340)
Q Consensus 295 ~iw~~~~~~~~~~~~--~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW~ 340 (340)
.+|+....+ +..+. ...++|++++-- +| +|+.|- .+.|++|+
T Consensus 867 ~vf~v~~~k-L~lv~~~~v~g~v~al~~~-~g-~Lla~i-g~~l~vy~ 910 (1158)
T 3ei3_A 867 VVFQYSDGK-LQTVAEKEVKGAVYSMVEF-NG-KLLASI-NSTVRLYE 910 (1158)
T ss_dssp EEEEEETTE-EEEEEEEEESSCEEEEEEE-TT-EEEEEE-TTEEEEEE
T ss_pred EEEEEECCE-EEEEEEEEcCCcCEEEeee-CC-EEEEEc-CCEEEEEE
Confidence 999875433 22221 235788887533 34 455443 57888874
No 302
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.46 E-value=0.041 Score=46.83 Aligned_cols=215 Identities=9% Similarity=0.020 Sum_probs=117.3
Q ss_pred CCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcC-CCeE-EEEeCCCeEEEEECCCCceEE-EEecCCCCeEEEEEcC
Q psy15421 118 DNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQI-VTSSGDMSCALWDIETGQQCA-SFIGHTGDVMSLSLAP 194 (340)
Q Consensus 118 d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l-~~~~~d~~v~iwd~~~~~~~~-~~~~~~~~v~~~~~~~ 194 (340)
.+.|+..++.......... +.+ ......+.|.. ++.| .+-...+.|..+++....... .+...-..+..+++.+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~--~~~-~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~ 88 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIV--VGG-LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW 88 (318)
T ss_dssp EEEEEEEETTCTTSCCEEE--EEE-EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEET
T ss_pred cCeEEEEECCCCceEEEEE--ecC-CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEc
Confidence 4557777776542111111 111 11233455543 3444 444457788889887653211 2222223466888887
Q ss_pred C-CCEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecC-CCEEEEEe-CCCcEEEEeCcCCcEEEEeecCCccc
Q psy15421 195 D-MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGS-DDATCRLFDIRADQELAMYSHDNIIC 271 (340)
Q Consensus 195 ~-~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s-~d~~i~iwd~~~~~~~~~~~~~~~~~ 271 (340)
. +.++++-...+.|.++++........+.......+.++++|. +..+.+-. ..+.|...++.......... .. ..
T Consensus 89 ~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-~~-l~ 166 (318)
T 3sov_A 89 LGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN-SE-IY 166 (318)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC-SS-CS
T ss_pred CCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE-CC-CC
Confidence 4 445556667789999998644322223334456789999986 44444442 35788888876433222221 12 22
Q ss_pred ceEEEEEcCCCcEEEE-EeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEe
Q psy15421 272 GITSVAFSRSGRLLLA-GYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 338 (340)
Q Consensus 272 ~i~~~~~s~~~~~l~~-g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~i 338 (340)
..+.++++|++..|.. =...+.|..++...........+.......+++..+ ..+.+-...+.|..
T Consensus 167 ~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~-~lywtd~~~~~V~~ 233 (318)
T 3sov_A 167 WPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILA 233 (318)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETT-EEEEEETTTTEEEE
T ss_pred CccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCC-EEEEEecCCCeEEE
Confidence 4688999996655554 445778999986533322223323344556666433 34444444455543
No 303
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.42 E-value=0.056 Score=47.60 Aligned_cols=219 Identities=11% Similarity=0.006 Sum_probs=122.2
Q ss_pred EEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcC-CCeEE-EEeCCCeEEEEECCCC----ceEEEEecCC
Q psy15421 111 FVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQIV-TSSGDMSCALWDIETG----QQCASFIGHT 184 (340)
Q Consensus 111 ~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~-~~~~d~~v~iwd~~~~----~~~~~~~~~~ 184 (340)
+|+.+. .+.|+..++.... ... .. ........+.|.. ++.|. +-...+.|..+++... .....+....
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~--~~~--~~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 158 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSE--YTS--LI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 158 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCS--CEE--EE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSC
T ss_pred eeEEec-cceeEEEccCCcc--eeE--ec-cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC
Confidence 444333 4567777765432 111 12 2233455666754 45544 4445678888888652 1222222234
Q ss_pred CCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCC-CEEEEEeC-CCcEEEEeCcCCcEE
Q psy15421 185 GDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WAFATGSD-DATCRLFDIRADQEL 261 (340)
Q Consensus 185 ~~v~~~~~~~-~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~-d~~i~iwd~~~~~~~ 261 (340)
..+..+++.+ .++++++-...+.|.+.++........+.........|+++|.+ ..+.+-.. .+.|...++......
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~ 238 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 238 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE
Confidence 4578899987 45555566678899999987554333343334557899999964 44444423 478888888754433
Q ss_pred EEeecCCcccceEEEEEcCCCcEEEEEe-CCCcEEEEeCCCceeeeeecc--CCcceEEEEECCCCCEEEEeeCCCcEEe
Q psy15421 262 AMYSHDNIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMKTERAGILAG--HDNRVSCLGVTEDGMAVATGSWDSFLRI 338 (340)
Q Consensus 262 ~~~~~~~~~~~i~~~~~s~~~~~l~~g~-~d~~i~iw~~~~~~~~~~~~~--h~~~i~~~~~s~d~~~l~s~s~D~~i~i 338 (340)
.... .. ....+.++++|++..|..+. ....|..++............ .......+++. .+..+++-...+.|..
T Consensus 239 ~~~~-~~-l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~ 315 (400)
T 3p5b_L 239 SLVT-EN-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFS 315 (400)
T ss_dssp EEEC-SS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEE
T ss_pred EEEE-CC-CCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEE
Confidence 2221 11 23478899998776665554 567899998654333222222 22344566663 3344555555555554
No 304
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.38 E-value=0.048 Score=45.76 Aligned_cols=174 Identities=13% Similarity=0.165 Sum_probs=83.3
Q ss_pred CCCeEEEEeCC-----CeEEEEECCCCceEEE--EecCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCeeee
Q psy15421 153 DDNQIVTSSGD-----MSCALWDIETGQQCAS--FIGHTGDVMSLSLAPDMRTFVSGACDA-----SAKLWDIRDGSCKQ 220 (340)
Q Consensus 153 ~~~~l~~~~~d-----~~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~sg~~dg-----~i~~wd~~~~~~~~ 220 (340)
++..++.|+.+ ..+.+||+.+.+-... +....... +++. .++..++.|+.++ .+..||+.+++-..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTL-GAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccce-EEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 33445555533 3588899877642211 11111111 2222 2566777777553 57788887765222
Q ss_pred --EecCCCCCeEEEEEecCCCEEEEEeCC-------CcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCC
Q psy15421 221 --TFPGHESDINAVTFFPNGWAFATGSDD-------ATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD 291 (340)
Q Consensus 221 --~~~~h~~~v~~v~~~~~~~~l~s~s~d-------~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d 291 (340)
.++...... +++. -+++.++.|+.+ ..+..||..+.+=...-........-..+.+ ++++++.|+.+
T Consensus 139 ~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 214 (302)
T 2xn4_A 139 VAPMNTRRSSV-GVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHD 214 (302)
T ss_dssp ECCCSSCCBSC-EEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBS
T ss_pred cCCCCCcccCc-eEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCC
Confidence 121111111 2222 256677777653 3578888875432111111111111222333 67888888764
Q ss_pred -----CcEEEEeCCCce--eeeeeccCCcceEEEEECCCCCEEEEeeCCC
Q psy15421 292 -----FNCNVWDSMKTE--RAGILAGHDNRVSCLGVTEDGMAVATGSWDS 334 (340)
Q Consensus 292 -----~~i~iw~~~~~~--~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~ 334 (340)
..+.+||..+.. .+..+......-..+. -++..++.|+.++
T Consensus 215 ~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~ 262 (302)
T 2xn4_A 215 GPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA--VNGLLYVVGGDDG 262 (302)
T ss_dssp SSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCS
T ss_pred CCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE--ECCEEEEECCcCC
Confidence 368889876543 2222221111111222 2666777777654
No 305
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.37 E-value=0.058 Score=46.53 Aligned_cols=166 Identities=12% Similarity=0.093 Sum_probs=96.1
Q ss_pred CCCeEEEEECCCC--ceE-EEEec-----CCCCeEEEEEcC--CCC--EEEEEeC--CCcEEEEECCCC--e--eeeEec
Q psy15421 162 GDMSCALWDIETG--QQC-ASFIG-----HTGDVMSLSLAP--DMR--TFVSGAC--DASAKLWDIRDG--S--CKQTFP 223 (340)
Q Consensus 162 ~d~~v~iwd~~~~--~~~-~~~~~-----~~~~v~~~~~~~--~~~--~~~sg~~--dg~i~~wd~~~~--~--~~~~~~ 223 (340)
.+|.|.++|+.+. +.. -.+.+ ..-....+.+.+ ++. ++++-.. +.+|.+|++..+ . .+..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6889999998732 211 12222 122466677655 343 4444333 577888876543 2 223444
Q ss_pred CC-CCCeEEEEEecCCCEEEEEe-----------------CCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEE
Q psy15421 224 GH-ESDINAVTFFPNGWAFATGS-----------------DDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLL 285 (340)
Q Consensus 224 ~h-~~~v~~v~~~~~~~~l~s~s-----------------~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 285 (340)
+. -...+.+++.++|..+++.. ..|.+.-+|.. +...... . ....+.++|+||+++|
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~--~-l~~pNGia~spDg~~l 235 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAE--G-FDFANGINISPDGKYV 235 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEE--E-ESSEEEEEECTTSSEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeec--C-CcccCcceECCCCCEE
Confidence 32 24579999999998877754 12445555543 2111111 1 1236889999999877
Q ss_pred EEEe-CCCcEEEEeCCC-cee--eeeeccCCcceEEEEECC-CCCEEEEeeCC
Q psy15421 286 LAGY-DDFNCNVWDSMK-TER--AGILAGHDNRVSCLGVTE-DGMAVATGSWD 333 (340)
Q Consensus 286 ~~g~-~d~~i~iw~~~~-~~~--~~~~~~h~~~i~~~~~s~-d~~~l~s~s~D 333 (340)
..+. ..+.|..|+... +.. ...+ .-.+..-.+++.+ +|++.+++..+
T Consensus 236 Yvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 236 YIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred EEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 6655 578899998642 221 1223 2235567788898 59888776544
No 306
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.35 E-value=0.055 Score=45.76 Aligned_cols=251 Identities=9% Similarity=0.157 Sum_probs=146.3
Q ss_pred CCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCC
Q psy15421 75 QDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD 154 (340)
Q Consensus 75 ~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 154 (340)
.+..|.|-|+.+...+..-+...+ +.-.+|..+.+|.-. ..+++++++.++. ++ .... ....|..-.|.+.
T Consensus 47 ~~~~VvIiDl~n~~~~~Rrpi~Ad---sAIMnP~~~ViALra-g~~LQiFnletK~---kl-ks~~-~~e~VvfWkWis~ 117 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRRPISAD---SAIMNPASKVIALKA-GKTLQIFNIEMKS---KM-KAHT-MTDDVTFWKWISL 117 (365)
T ss_dssp TEEEEEEEETTSTTSCEEEECCCS---EEEECSSSSEEEEEE-TTEEEEEETTTTE---EE-EEEE-CSSCEEEEEECSS
T ss_pred CCCEEEEEECCCCCCccccccccc---eeeeCCCccEEEEec-CCeEEEechHHhh---hh-ccee-cCCccEEEEecCC
Confidence 344788889888766544333222 122578888777765 7889999997753 21 1111 2345666677777
Q ss_pred CeEEEEeCCCeEEEEECCCC-ceEEEEecCC----CCeEEEEEcCCCCEEEE-Ee------CCCcEEEEECCCCeeeeEe
Q psy15421 155 NQIVTSSGDMSCALWDIETG-QQCASFIGHT----GDVMSLSLAPDMRTFVS-GA------CDASAKLWDIRDGSCKQTF 222 (340)
Q Consensus 155 ~~l~~~~~d~~v~iwd~~~~-~~~~~~~~~~----~~v~~~~~~~~~~~~~s-g~------~dg~i~~wd~~~~~~~~~~ 222 (340)
..|+..+ +..|.-|++... ++...+..|. ..+.....+++.+.++. |- -.|.+.+|..+.+. .+.+
T Consensus 118 ~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~i 195 (365)
T 2xzh_A 118 NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPI 195 (365)
T ss_dssp SEEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEE
T ss_pred CeEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-ccee
Confidence 7766554 578999999753 3445554443 34677777888875542 22 23778899877543 4667
Q ss_pred cCCCCCeEEEEEecC--CC-EEEEEeC---CCcEEEEeCcCC---c------EEEE-eecCCcccceEEEEEcCCCcEEE
Q psy15421 223 PGHESDINAVTFFPN--GW-AFATGSD---DATCRLFDIRAD---Q------ELAM-YSHDNIICGITSVAFSRSGRLLL 286 (340)
Q Consensus 223 ~~h~~~v~~v~~~~~--~~-~l~s~s~---d~~i~iwd~~~~---~------~~~~-~~~~~~~~~i~~~~~s~~~~~l~ 286 (340)
+||......+.+..+ .. .|+-+.. -+.++|-++... . .+.. +..+....=.-++..++.-..+.
T Consensus 196 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviy 275 (365)
T 2xzh_A 196 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF 275 (365)
T ss_dssp CCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEE
T ss_pred eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEE
Confidence 777544333222211 11 2222221 147788877432 1 1111 11111111245677788777888
Q ss_pred EEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcE
Q psy15421 287 AGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL 336 (340)
Q Consensus 287 ~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i 336 (340)
.-+.-|-+.+||++++.++..-+--.+.|...+-.++..-++.....|.|
T Consensus 276 viTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqV 325 (365)
T 2xzh_A 276 LITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV 325 (365)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEE
T ss_pred EEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEE
Confidence 88899999999999998877554444555544444333334444455544
No 307
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.32 E-value=0.11 Score=48.64 Aligned_cols=225 Identities=6% Similarity=-0.053 Sum_probs=121.1
Q ss_pred eCCCeEEEEeCCCCCeeEE-eeCCCCcEEEEEECCCCCEEEEEeC-CCeEEEEEccCCCCceEEEEeecCCCcceEEEEE
Q psy15421 74 SQDGKLIVWDSYTTNKVHA-IPLRSSWVMTCAYAPSGSFVACGGL-DNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF 151 (340)
Q Consensus 74 ~~d~~i~iwd~~~~~~~~~-~~~~~~~i~~v~~~~~~~~l~~~~~-d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 151 (340)
.....|+.-|+........ ....-.....++|++.+..++.+.. .+.|..+++...... ...+.........+.+
T Consensus 15 ~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~---~~v~~~~~~~P~GlAv 91 (619)
T 3s94_A 15 ANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV---QNVVVSGLLSPDGLAC 91 (619)
T ss_dssp ECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----C---EEEECSSCSCEEEEEE
T ss_pred eccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCce---EEEEeCCCCCcCeEEE
Confidence 4456778777765431111 2222344678899987766665554 567777776533111 1112221123445555
Q ss_pred cC-CCe-EEEEeCCCeEEEEECCCCceEEEEe-cCCCCeEEEEEcCCCCEEEEEe--CCCcEEEEECCCCeeeeEecCCC
Q psy15421 152 LD-DNQ-IVTSSGDMSCALWDIETGQQCASFI-GHTGDVMSLSLAPDMRTFVSGA--CDASAKLWDIRDGSCKQTFPGHE 226 (340)
Q Consensus 152 ~~-~~~-l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~sg~--~dg~i~~wd~~~~~~~~~~~~h~ 226 (340)
.. ++. +.+-...+.|.+.++..... ..+. ..-.....+++.|....++... ..+.|...++.-..........-
T Consensus 92 D~~~~~ly~~d~~~~~I~v~~~dG~~~-~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~ 170 (619)
T 3s94_A 92 DWLGEKLYWTDSETNRIEVSNLDGSLR-KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEI 170 (619)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSC
T ss_pred EecCCEEEEEeCCCCEEEEEECCCCCE-EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCC
Confidence 43 444 44555678999999975433 2333 3445578999999755444333 24667777765322222222234
Q ss_pred CCeEEEEEecCC-CEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceee
Q psy15421 227 SDINAVTFFPNG-WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERA 305 (340)
Q Consensus 227 ~~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~ 305 (340)
...+.|++++++ +.+++=...+.|...|+.......... ... .....+++.++ .++++-..++.|...|..+++..
T Consensus 171 ~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~-~~~-~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~ 247 (619)
T 3s94_A 171 YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK-GSL-PHPFALTLFED-ILYWTDWSTHSILACNKYTGEGL 247 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-----------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCC
T ss_pred CCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEe-CCC-CCceEEEEeCC-EEEEecCCCCEEEEEECCCCccc
Confidence 467899999864 445555567789888887543322211 111 11345677665 55566566778888887666443
No 308
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.28 E-value=0.075 Score=45.95 Aligned_cols=226 Identities=14% Similarity=0.145 Sum_probs=120.6
Q ss_pred cCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCC-eeEEee---CCCCcEEEEEECCC---CCEEEEEeC----C----C
Q psy15421 55 LAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTN-KVHAIP---LRSSWVMTCAYAPS---GSFVACGGL----D----N 119 (340)
Q Consensus 55 ~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~---~~~~~i~~v~~~~~---~~~l~~~~~----d----~ 119 (340)
...-..++|.|+++++++ ..+|.|++++. +++ .+..++ ........++++|+ +..|+.+.. + +
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 445689999999986554 56699999973 443 122221 11245789999997 444444332 2 4
Q ss_pred eEEEEEccCCCCce---E-EEEeec---CCCcceEEEEEcCCCeEEEEeCC--------------CeEEEEECCCC----
Q psy15421 120 ICSIYSLKTREGNV---R-VSRELP---GHTGYLSCCRFLDDNQIVTSSGD--------------MSCALWDIETG---- 174 (340)
Q Consensus 120 ~v~i~~~~~~~~~~---~-~~~~~~---~~~~~v~~~~~~~~~~l~~~~~d--------------~~v~iwd~~~~---- 174 (340)
.|..++........ . +...++ .|. -..+.|.+++.|..+.++ +.|.-++....
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~--~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHN--GGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCC--CCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcC--CceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 56666654331111 1 111122 122 234667777765554332 34555554321
Q ss_pred -----ceEEEEecCCCCeEEEEEcC-CCCEEEEEeCCC---cEEEEECCCCe------------------eeeEecCCCC
Q psy15421 175 -----QQCASFIGHTGDVMSLSLAP-DMRTFVSGACDA---SAKLWDIRDGS------------------CKQTFPGHES 227 (340)
Q Consensus 175 -----~~~~~~~~~~~~v~~~~~~~-~~~~~~sg~~dg---~i~~wd~~~~~------------------~~~~~~~h~~ 227 (340)
..+. ..++. ....++|+| ++.++++-...+ .|.+.. .+. .+..+.....
T Consensus 184 npf~~~~i~-a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ 259 (354)
T 3a9g_A 184 NPFPNSPIW-SYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGSETW 259 (354)
T ss_dssp SSSTTCCEE-EECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTTCCC
T ss_pred CCCCCCcEE-EEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecCCCCc
Confidence 0111 12332 356899999 666665432221 233332 211 1222311123
Q ss_pred CeEEEEEe-------cCCCEEEEEeCCCcEEEEeCcCCc-EE--EEeecCCcccceEEEEEcCCCcEEEEEe
Q psy15421 228 DINAVTFF-------PNGWAFATGSDDATCRLFDIRADQ-EL--AMYSHDNIICGITSVAFSRSGRLLLAGY 289 (340)
Q Consensus 228 ~v~~v~~~-------~~~~~l~s~s~d~~i~iwd~~~~~-~~--~~~~~~~~~~~i~~~~~s~~~~~l~~g~ 289 (340)
....++|. .+|.++++....+.|...++.... .. ..+. ......+..+++.|||.++++..
T Consensus 260 ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~-~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 260 APSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFF-KNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEEC-TTTSCCEEEEEECTTSCEEEEEC
T ss_pred CCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeec-cCCCCCeeEEEECCCCcEEEEEe
Confidence 56788883 467777777667788888876432 21 1121 11134588999999998776654
No 309
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.26 E-value=0.058 Score=47.34 Aligned_cols=141 Identities=14% Similarity=0.089 Sum_probs=89.2
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeeeeEecCC----CCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCc-----------
Q psy15421 195 DMRTFVSGACDASAKLWDIRDGSCKQTFPGH----ESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ----------- 259 (340)
Q Consensus 195 ~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h----~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~----------- 259 (340)
++..++.+ .++.||.-++..+..-+.++-. -..|..+..+|+|.++|..+ +..|.|-.+..+.
T Consensus 31 n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccc
Confidence 34444332 3467777776643333333321 23577899999999999886 5688888876211
Q ss_pred -EEEEeecCC----cccceEEEEEcCC---CcEEEEEeCCCcEEEEeCCCc--eee--------eeeccCCcceEEEEEC
Q psy15421 260 -ELAMYSHDN----IICGITSVAFSRS---GRLLLAGYDDFNCNVWDSMKT--ERA--------GILAGHDNRVSCLGVT 321 (340)
Q Consensus 260 -~~~~~~~~~----~~~~i~~~~~s~~---~~~l~~g~~d~~i~iw~~~~~--~~~--------~~~~~h~~~i~~~~~s 321 (340)
....+.... ...+|..+.|||- +..|++=..|+.|++||+... ++. .-+......|.+++|+
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg 188 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFS 188 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEEC
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEc
Confidence 111222211 1246999999996 457888899999999998641 111 0122334789999999
Q ss_pred CCCCEEEEee--CCCcEE
Q psy15421 322 EDGMAVATGS--WDSFLR 337 (340)
Q Consensus 322 ~d~~~l~s~s--~D~~i~ 337 (340)
+++..|...+ .+|-|+
T Consensus 189 ~~~lTLYvl~~t~~GDIY 206 (452)
T 3pbp_A 189 KDGLTLYCLNTTEGGDIF 206 (452)
T ss_dssp TTSSCEEEEECTTSCEEE
T ss_pred CCCcEEEEEecCCCCCEE
Confidence 9998766644 777775
No 310
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.16 E-value=0.084 Score=44.15 Aligned_cols=184 Identities=15% Similarity=0.168 Sum_probs=91.7
Q ss_pred CCCeEEEEeCC-----CeEEEEeCCCCC---eeEEe--eCCCCcEEEEEECCCCCEEEEEeCC-----CeEEEEEccCCC
Q psy15421 66 DSRNLVSASQD-----GKLIVWDSYTTN---KVHAI--PLRSSWVMTCAYAPSGSFVACGGLD-----NICSIYSLKTRE 130 (340)
Q Consensus 66 ~~~~l~s~~~d-----~~i~iwd~~~~~---~~~~~--~~~~~~i~~v~~~~~~~~l~~~~~d-----~~v~i~~~~~~~ 130 (340)
++..++.|+.+ ..+.++|..+.+ ....- +........+.+ +++.++.|+.+ +.+.+||..+.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~- 138 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNID- 138 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT-
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCC-
Confidence 56677777755 458889987766 33221 111111122222 67777777754 35677776543
Q ss_pred CceEEEEeecCCCcceEEEEEcCCCeEEEEeCC-----CeEEEEECCCCceEEE--EecCCCCeEEEEEcCCCCEEEEEe
Q psy15421 131 GNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGD-----MSCALWDIETGQQCAS--FIGHTGDVMSLSLAPDMRTFVSGA 203 (340)
Q Consensus 131 ~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~sg~ 203 (340)
.......++.....-.++ ..++..++.|+.+ ..+..||+.+++-... +....... +++. .+++.++.|+
T Consensus 139 -~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~i~v~GG 214 (301)
T 2vpj_A 139 -QWSMLGDMQTAREGAGLV-VASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGA-GVAL-LNDHIYVVGG 214 (301)
T ss_dssp -EEEEEEECSSCCBSCEEE-EETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEECC
T ss_pred -eEEECCCCCCCcccceEE-EECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccc-eEEE-ECCEEEEEeC
Confidence 333323333222111222 2234445555433 4588999887643221 11111111 2222 2566777777
Q ss_pred CC-----CcEEEEECCCCeeeeE--ecCCCCCeEEEEEecCCCEEEEEeCC-----CcEEEEeCcCC
Q psy15421 204 CD-----ASAKLWDIRDGSCKQT--FPGHESDINAVTFFPNGWAFATGSDD-----ATCRLFDIRAD 258 (340)
Q Consensus 204 ~d-----g~i~~wd~~~~~~~~~--~~~h~~~v~~v~~~~~~~~l~s~s~d-----~~i~iwd~~~~ 258 (340)
.+ ..+.+||+.+++-... ++.......++. -+++.++.|+.+ ..+.+||..+.
T Consensus 215 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 215 FDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp BCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred CCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 64 5688999987653221 111111112222 267777777765 34677777643
No 311
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.15 E-value=0.0041 Score=59.17 Aligned_cols=189 Identities=13% Similarity=0.005 Sum_probs=99.8
Q ss_pred EEEEcC-CCeEEEE-eCCCeEEEEECCC----CceEEEEecCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCeeee
Q psy15421 148 CCRFLD-DNQIVTS-SGDMSCALWDIET----GQQCASFIGHTGDVMSLSLAPD-MRTFVSGACDASAKLWDIRDGSCKQ 220 (340)
Q Consensus 148 ~~~~~~-~~~l~~~-~~d~~v~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~~~sg~~dg~i~~wd~~~~~~~~ 220 (340)
.+.|.. .+.|..+ ...+.|..+++.. ......+......+..+++.+. ++++++-...+.|.++++.......
T Consensus 410 gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~ 489 (699)
T 1n7d_A 410 ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKT 489 (699)
T ss_dssp CCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEE
T ss_pred EEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEE
Confidence 344543 3444433 3467888888865 1111111111123556888754 4455555667899999987544333
Q ss_pred EecCCCCCeEEEEEecCC-CEEEEEeCC-CcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCc-EEEEEeCCCcEEEE
Q psy15421 221 TFPGHESDINAVTFFPNG-WAFATGSDD-ATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVW 297 (340)
Q Consensus 221 ~~~~h~~~v~~v~~~~~~-~~l~s~s~d-~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~g~~d~~i~iw 297 (340)
.+.........|+++|.+ .++++-... +.|..+++......... ... ....+.++|+|++. ++++-...+.|..+
T Consensus 490 l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~-~~~-l~~PnGlavd~~~~~LY~aD~~~~~I~~~ 567 (699)
T 1n7d_A 490 LFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV-TEN-IQWPNGITLDLLSGRLYWVDSKLHSISSI 567 (699)
T ss_dssp ECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEES-CSS-CSSCCCEEECTTTCCEEEEETTTTEEEEE
T ss_pred EEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEE-eCC-CCCccEEEEeccCCEEEEEecCCCeEEEE
Confidence 333223456788999864 444444333 67888777643222211 111 22356899998755 45555567789999
Q ss_pred eCCCceeeeeec--cCCcceEEEEECCCCCEEEEeeCCCcEEec
Q psy15421 298 DSMKTERAGILA--GHDNRVSCLGVTEDGMAVATGSWDSFLRIW 339 (340)
Q Consensus 298 ~~~~~~~~~~~~--~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW 339 (340)
+.........+. ........|++..+ .++++....+.|...
T Consensus 568 d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~ 610 (699)
T 1n7d_A 568 DVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSA 610 (699)
T ss_dssp CSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEE
T ss_pred ccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEE
Confidence 865432222222 11122334444444 344555555666543
No 312
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.09 E-value=0.053 Score=47.58 Aligned_cols=135 Identities=17% Similarity=0.166 Sum_probs=88.7
Q ss_pred CCCeEEEEECCCCceEEEEecC----CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe------------eeeEecC-
Q psy15421 162 GDMSCALWDIETGQQCASFIGH----TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS------------CKQTFPG- 224 (340)
Q Consensus 162 ~d~~v~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~------------~~~~~~~- 224 (340)
.++.||..++.....-+.+... -..+..+..+|+|++++.. .+.+|.+-.+..+. ..+.+.-
T Consensus 39 ~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~-g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~ 117 (452)
T 3pbp_A 39 QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLF-NDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSID 117 (452)
T ss_dssp ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEE-CSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGG
T ss_pred ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEe-cCCeEEEEEecCccccCcccccccccceeEEEcC
Confidence 3477777777643332333221 2257889999999988765 56789998876321 0122221
Q ss_pred -----CCCCeEEEEEecC---CCEEEEEeCCCcEEEEeCcCC--cEE------EEeecCCcccceEEEEEcCCCcEEEEE
Q psy15421 225 -----HESDINAVTFFPN---GWAFATGSDDATCRLFDIRAD--QEL------AMYSHDNIICGITSVAFSRSGRLLLAG 288 (340)
Q Consensus 225 -----h~~~v~~v~~~~~---~~~l~s~s~d~~i~iwd~~~~--~~~------~~~~~~~~~~~i~~~~~s~~~~~l~~g 288 (340)
...+|..+-|+|- +..|++-..|+.|++||+... .+. ..++.......|.+++|.+++-.|.+.
T Consensus 118 ~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl 197 (452)
T 3pbp_A 118 EEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCL 197 (452)
T ss_dssp GCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEE
T ss_pred CcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEE
Confidence 2467999999995 568999999999999998742 122 112222222458899999998877775
Q ss_pred e--CCCcEEEE
Q psy15421 289 Y--DDFNCNVW 297 (340)
Q Consensus 289 ~--~d~~i~iw 297 (340)
+ ..|.|+-.
T Consensus 198 ~~t~~GDIYAl 208 (452)
T 3pbp_A 198 NTTEGGDIFAF 208 (452)
T ss_dssp ECTTSCEEEEE
T ss_pred ecCCCCCEEEE
Confidence 5 77877654
No 313
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.08 E-value=0.12 Score=44.42 Aligned_cols=144 Identities=15% Similarity=0.095 Sum_probs=82.7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeee--eEec----CCCCCeEEEEEecC----CCEEEEEe--CCCcEE
Q psy15421 184 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK--QTFP----GHESDINAVTFFPN----GWAFATGS--DDATCR 251 (340)
Q Consensus 184 ~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~--~~~~----~h~~~v~~v~~~~~----~~~l~s~s--~d~~i~ 251 (340)
-.....|+|.|++.++++-...|.|++++...++.. ..+. ........|+++|+ +..+++-+ .+..|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 446789999999998777655899999987655432 2221 22456789999995 55555433 344555
Q ss_pred EEeCcCC----------cEEE-EeecCCcccceEEEEEcCCCcEEEEEeC-------------CCcEEEEeCCCc-----
Q psy15421 252 LFDIRAD----------QELA-MYSHDNIICGITSVAFSRSGRLLLAGYD-------------DFNCNVWDSMKT----- 302 (340)
Q Consensus 252 iwd~~~~----------~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~g~~-------------d~~i~iw~~~~~----- 302 (340)
-|..... +.+. .+.. ........++|.|||.++++-++ .+.|.-.+....
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~-~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n 189 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPK-GVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN 189 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECC-CSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCC-CCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence 5554431 1111 1111 11112456899999988777442 244444443211
Q ss_pred ---eeeeeeccCCcceEEEEECCCCCEEEE
Q psy15421 303 ---ERAGILAGHDNRVSCLGVTEDGMAVAT 329 (340)
Q Consensus 303 ---~~~~~~~~h~~~i~~~~~s~d~~~l~s 329 (340)
.....-.+| .....++|.|+|.+.++
T Consensus 190 Pf~~~~i~a~G~-RNp~Gla~dp~G~L~~~ 218 (347)
T 3das_A 190 PFPGSPVYSYGH-RNVQGLAWDDKQRLFAS 218 (347)
T ss_dssp SSTTCCEEEBCC-SBCCEEEECTTCCEEEE
T ss_pred CCCCCeEEeeCC-CCcceEEECCCCCEEEE
Confidence 011111245 34568899998876554
No 314
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.05 E-value=0.13 Score=44.38 Aligned_cols=222 Identities=13% Similarity=0.087 Sum_probs=116.1
Q ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeec---CCCcceEEEEEcCC----CeEEEE-eCC-----Ce
Q psy15421 99 WVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELP---GHTGYLSCCRFLDD----NQIVTS-SGD-----MS 165 (340)
Q Consensus 99 ~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~----~~l~~~-~~d-----~~ 165 (340)
....++|.|+|+++++ ..++.|.+++ .+ .......++ ........+.+.++ +.+..+ ... ..
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g--~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EG--RLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TT--EEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CC--CccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 4568899999996655 5568888887 22 222222221 11234566777765 444433 322 56
Q ss_pred EEEEECCCCce-----E-EEEe---cCCCCeEEEEEcCCCCEEEEEeC-------------CCcEEEEECCCC-------
Q psy15421 166 CALWDIETGQQ-----C-ASFI---GHTGDVMSLSLAPDMRTFVSGAC-------------DASAKLWDIRDG------- 216 (340)
Q Consensus 166 v~iwd~~~~~~-----~-~~~~---~~~~~v~~~~~~~~~~~~~sg~~-------------dg~i~~wd~~~~------- 216 (340)
|..++...+.. + ..+. ........++|.|++.++++-+. .|.|.-++....
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf 186 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPF 186 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcc
Confidence 77787764321 1 1122 11113468999999987776432 145655654320
Q ss_pred -----eeeeEe-cCCCCCeEEEEEec-CCCEEEEEeCCCc--------EEEEeCcC----------------CcEEEEee
Q psy15421 217 -----SCKQTF-PGHESDINAVTFFP-NGWAFATGSDDAT--------CRLFDIRA----------------DQELAMYS 265 (340)
Q Consensus 217 -----~~~~~~-~~h~~~v~~v~~~~-~~~~l~s~s~d~~--------i~iwd~~~----------------~~~~~~~~ 265 (340)
.....+ .+|. ....++|+| ++..+++=..... |.+..-.. ..++..+.
T Consensus 187 ~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~ 265 (352)
T 2ism_A 187 LGRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP 265 (352)
T ss_dssp TTCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT
T ss_pred cCCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC
Confidence 000111 1222 245788999 6766665433332 33322111 00111110
Q ss_pred cCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCce-------eeeeeccCCcceEEEEECCCCCEEEEee
Q psy15421 266 HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTE-------RAGILAGHDNRVSCLGVTEDGMAVATGS 331 (340)
Q Consensus 266 ~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~-------~~~~~~~h~~~i~~~~~s~d~~~l~s~s 331 (340)
.......++| .+|.++++....+.|...+..... ....+ .-...+..+++.|||.++++..
T Consensus 266 ---~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~-~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 266 ---QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL-SGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp ---TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE-ESSCCEEEEEECTTSCEEEEEC
T ss_pred ---CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheec-ccCCCeeEEEECCCCcEEEEEe
Confidence 1123566777 467777776677777777654221 11222 2236789999999998777654
No 315
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.04 E-value=0.11 Score=43.61 Aligned_cols=226 Identities=13% Similarity=0.147 Sum_probs=106.8
Q ss_pred CCCeEEEEeCC----CeEEEEeCCCCCeeEE--eeCCCCcEEEEEECCCCCEEEEEeC----C-----CeEEEEEccCCC
Q psy15421 66 DSRNLVSASQD----GKLIVWDSYTTNKVHA--IPLRSSWVMTCAYAPSGSFVACGGL----D-----NICSIYSLKTRE 130 (340)
Q Consensus 66 ~~~~l~s~~~d----~~i~iwd~~~~~~~~~--~~~~~~~i~~v~~~~~~~~l~~~~~----d-----~~v~i~~~~~~~ 130 (340)
++..++.||.+ ..+.++|..+.+.... ++........+. .++.+++.|+. + +.+.+||..+.
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~- 100 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCV--VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN- 100 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCEEEETTEEEECCCEEEEETTTT-
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEE--ECCEEEEECCCcCCCCCCeecceEEEECCCCC-
Confidence 45566666632 3578888776653322 111111111222 25677777776 2 34667776543
Q ss_pred CceEEEEeecCCCcceEEEEEcCCCeEEEEeCC-----CeEEEEECCCCceEE--EEecCCCCeEEEEEcCCCCEEEEEe
Q psy15421 131 GNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGD-----MSCALWDIETGQQCA--SFIGHTGDVMSLSLAPDMRTFVSGA 203 (340)
Q Consensus 131 ~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~sg~ 203 (340)
.......++........+. .++..++.|+.+ ..+.+||+.+++-.. .+.........+.+ ++++++.|+
T Consensus 101 -~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 176 (308)
T 1zgk_A 101 -QWSPCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGG 176 (308)
T ss_dssp -EEEECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred -eEeECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeC
Confidence 2222222222111112222 233344444422 458889987764221 11111111122222 566777776
Q ss_pred CC-----CcEEEEECCCCeeee--EecCCCCCeEEEEEecCCCEEEEEeCC-----CcEEEEeCcCCcEEEEeecCCccc
Q psy15421 204 CD-----ASAKLWDIRDGSCKQ--TFPGHESDINAVTFFPNGWAFATGSDD-----ATCRLFDIRADQELAMYSHDNIIC 271 (340)
Q Consensus 204 ~d-----g~i~~wd~~~~~~~~--~~~~h~~~v~~v~~~~~~~~l~s~s~d-----~~i~iwd~~~~~~~~~~~~~~~~~ 271 (340)
.+ ..+..||+.+.+=.. .++.....-.++. . +++.++.|+.+ ..+.+||..+.+=...-.......
T Consensus 177 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~ 254 (308)
T 1zgk_A 177 FDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCV-L-HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRS 254 (308)
T ss_dssp BCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-E-TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCB
T ss_pred CCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEE-E-CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCcc
Confidence 54 468889987764221 1111111112222 2 67778888765 568899987643211111111111
Q ss_pred ceEEEEEcCCCcEEEEEeCC-----CcEEEEeCCCc
Q psy15421 272 GITSVAFSRSGRLLLAGYDD-----FNCNVWDSMKT 302 (340)
Q Consensus 272 ~i~~~~~s~~~~~l~~g~~d-----~~i~iw~~~~~ 302 (340)
....+.+ ++++++.|+.+ ..+.+||..+.
T Consensus 255 ~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 255 ALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp SCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred ceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 1222222 67888888754 34667776543
No 316
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.01 E-value=0.17 Score=45.26 Aligned_cols=104 Identities=12% Similarity=0.173 Sum_probs=61.6
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCee--eeEecC------CCCCeEEEEEec----CCCEEEEEeC------
Q psy15421 185 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC--KQTFPG------HESDINAVTFFP----NGWAFATGSD------ 246 (340)
Q Consensus 185 ~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~--~~~~~~------h~~~v~~v~~~~----~~~~l~s~s~------ 246 (340)
.....|+|.|+++++++-...+.|++++..++.. +..+.. .......|+|+| ++..+++-+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 4578999999998777654445798888655543 222321 234577999999 4555555543
Q ss_pred ------CCcEEEEeCcCC-------cEEE-EeecCCcccceEEEEEcCCCcEEEEEe
Q psy15421 247 ------DATCRLFDIRAD-------QELA-MYSHDNIICGITSVAFSRSGRLLLAGY 289 (340)
Q Consensus 247 ------d~~i~iwd~~~~-------~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~g~ 289 (340)
...|.-|+.... +.+. .+.... ......++|.|||+++++-+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~-~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSK-DHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCS-SCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCC-CCCCCeEeECCCCeEEEEEC
Confidence 234555554321 1111 111111 12367899999999877644
No 317
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.92 E-value=0.19 Score=44.26 Aligned_cols=251 Identities=9% Similarity=0.145 Sum_probs=148.4
Q ss_pred CCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCC
Q psy15421 75 QDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD 154 (340)
Q Consensus 75 ~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 154 (340)
.+..|.|-|+.+...+..-+...+ +.-.+|..+.+|.-. ..+++|+++.+.. ++ ....- ...|..-.|.+.
T Consensus 46 ~~~~vvIiDl~~~~~~~rrpi~Ad---sAIMnP~~~iiALra-g~~lQiFnle~K~---kl-ks~~~-~e~VvfWkWis~ 116 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRPISAD---SAIMNPASKVIALKA-GKTLQIFNIEMKS---KM-KAHTM-TDDVTFWKWISL 116 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEECCCS---EEEECSSSSCEEEEE-TTEEEEEETTTTE---EE-EEEEC-SSCCCEEEEEET
T ss_pred CCCeEEEEECCCCCcceecccccc---eeeeCCCCcEEEEec-CCeEEEEchHHhh---hh-cceec-CCCceEEEecCC
Confidence 334788888887665543333222 223577777777654 7889999997653 11 11111 234555566666
Q ss_pred CeEEEEeCCCeEEEEECCCC-ceEEEEecCC----CCeEEEEEcCCCCEEEE-Ee------CCCcEEEEECCCCeeeeEe
Q psy15421 155 NQIVTSSGDMSCALWDIETG-QQCASFIGHT----GDVMSLSLAPDMRTFVS-GA------CDASAKLWDIRDGSCKQTF 222 (340)
Q Consensus 155 ~~l~~~~~d~~v~iwd~~~~-~~~~~~~~~~----~~v~~~~~~~~~~~~~s-g~------~dg~i~~wd~~~~~~~~~~ 222 (340)
..|... .+..|.-|++... .+...+..|. ..|.....+++.+.++. |- -.|.+.+|..+.+. .+.+
T Consensus 117 ~~l~lV-T~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~i 194 (494)
T 1bpo_A 117 NTVALV-TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPI 194 (494)
T ss_dssp TEEEEE-CSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEE
T ss_pred CeEEEE-cCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchh
Confidence 666554 4688999999753 3455555443 35777777888886552 22 24778899876543 4667
Q ss_pred cCCCCCeEEEEEecCC---CEEEEEeCC---CcEEEEeCcCC--------cEEEE--eecCCcccceEEEEEcCCCcEEE
Q psy15421 223 PGHESDINAVTFFPNG---WAFATGSDD---ATCRLFDIRAD--------QELAM--YSHDNIICGITSVAFSRSGRLLL 286 (340)
Q Consensus 223 ~~h~~~v~~v~~~~~~---~~l~s~s~d---~~i~iwd~~~~--------~~~~~--~~~~~~~~~i~~~~~s~~~~~l~ 286 (340)
+||......+.+..+. ..|+-+... +.+.|-++... +.... +..+....=..++..++.-..+.
T Consensus 195 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviy 274 (494)
T 1bpo_A 195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF 274 (494)
T ss_dssp CCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEE
T ss_pred eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEE
Confidence 7886554333332111 123333332 67888887532 11111 11111111245778888888888
Q ss_pred EEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcE
Q psy15421 287 AGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL 336 (340)
Q Consensus 287 ~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i 336 (340)
.-+.-|-+.+||++++.++..-+--.+.|...+...+..-++..-..|.|
T Consensus 275 viTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqV 324 (494)
T 1bpo_A 275 LITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV 324 (494)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEE
T ss_pred EEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceE
Confidence 88999999999999998877555445566555555444445544455554
No 318
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.92 E-value=0.013 Score=46.57 Aligned_cols=141 Identities=11% Similarity=0.059 Sum_probs=78.8
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeee------eEe-c-CCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcC
Q psy15421 186 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK------QTF-P-GHESDINAVTFFPNGWAFATGSDDATCRLFDIRA 257 (340)
Q Consensus 186 ~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~------~~~-~-~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 257 (340)
.+..++|+|++.+++. .+|.+.-.+..+.... ..+ . +-. ...++.|.|+|.++++ .||.|+-++-.+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 4669999999987666 6777666565442110 111 0 111 1468999999988888 569988777532
Q ss_pred CcE--E----EEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCcee-----eeeecc--CCcceEEEEECCCC
Q psy15421 258 DQE--L----AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER-----AGILAG--HDNRVSCLGVTEDG 324 (340)
Q Consensus 258 ~~~--~----~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~-----~~~~~~--h~~~i~~~~~s~d~ 324 (340)
... . ........ ..+..+.|.|+|.+.++. |+.++-.-..+... .....+ .-..-.-+.|+++|
T Consensus 117 ~~~~~Wl~~a~~vg~~gw-~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G 193 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGW-SGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVG 193 (236)
T ss_dssp STTCCHHHHSEEEECSSG-GGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTS
T ss_pred CCCCceeccccEeccCCC-CceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCC
Confidence 111 0 11111111 247899999999999888 66643221111100 011111 11223346799999
Q ss_pred CEEEEeeCCCcE
Q psy15421 325 MAVATGSWDSFL 336 (340)
Q Consensus 325 ~~l~s~s~D~~i 336 (340)
...+.. ++.+
T Consensus 194 ~l~~v~--~g~~ 203 (236)
T 1tl2_A 194 TLFGVQ--GGKF 203 (236)
T ss_dssp CEEEEE--TTEE
T ss_pred cEEEEe--CCeE
Confidence 766544 6654
No 319
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.91 E-value=0.15 Score=42.92 Aligned_cols=210 Identities=10% Similarity=0.065 Sum_probs=98.4
Q ss_pred EEEEeCCCeEEEEeCCCCCeeE-EeeCCCCcEEEEEECCCCCEEEEEeC-----C--C----eEEEEEccCCCCceEEEE
Q psy15421 70 LVSASQDGKLIVWDSYTTNKVH-AIPLRSSWVMTCAYAPSGSFVACGGL-----D--N----ICSIYSLKTREGNVRVSR 137 (340)
Q Consensus 70 l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~~i~~v~~~~~~~~l~~~~~-----d--~----~v~i~~~~~~~~~~~~~~ 137 (340)
++.|+ ..+.+||..+.+... .++.............++..++.|+. . . .+.+||..+. ......
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~--~W~~~~ 83 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS--EWLGMP 83 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTT--EEEECC
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCC--eEEECC
Confidence 44455 478899988776432 11111122223334457788888874 1 1 1555665432 232222
Q ss_pred eecCCCcceEEEEEcCCCeEEEEeCC--------CeEEEEECCCCceEE--EEecCCCCeEEEEEcCCCCEEEEEeC-C-
Q psy15421 138 ELPGHTGYLSCCRFLDDNQIVTSSGD--------MSCALWDIETGQQCA--SFIGHTGDVMSLSLAPDMRTFVSGAC-D- 205 (340)
Q Consensus 138 ~~~~~~~~v~~~~~~~~~~l~~~~~d--------~~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~sg~~-d- 205 (340)
.++....... +....+..++.|+.+ ..+.+||+.+++-.. .+...... .+++. .+++.++.|+. +
T Consensus 84 ~~p~~r~~~~-~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 84 PLPSPRCLFG-LGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYG-HTVLS-HMDLVYVIGGKGSD 160 (315)
T ss_dssp CBSSCEESCE-EEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEE-ETTEEEEECCBCTT
T ss_pred CCCcchhcee-EEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccc-eeEEE-ECCEEEEEeCCCCC
Confidence 2221111111 122233344455421 458889988764211 11111111 12222 35567777775 2
Q ss_pred ----CcEEEEECCCCeeee--EecCCCCCeEEEEEecCCCEEEEEeCCC-----cEEEEeCcCCcEEEEeec-CCcccce
Q psy15421 206 ----ASAKLWDIRDGSCKQ--TFPGHESDINAVTFFPNGWAFATGSDDA-----TCRLFDIRADQELAMYSH-DNIICGI 273 (340)
Q Consensus 206 ----g~i~~wd~~~~~~~~--~~~~h~~~v~~v~~~~~~~~l~s~s~d~-----~i~iwd~~~~~~~~~~~~-~~~~~~i 273 (340)
..+..||..+.+=.. .++.....- +++. -+++.++.|+.++ .+.+||..+.+= ..... ......-
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~ 237 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQTARSLF-GATV-HDGRIIVAAGVTDTGLTSSAEVYSITDNKW-APFEAFPQERSSL 237 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEEEEECSSSEEEEEEEEETTTTEE-EEECCCSSCCBSC
T ss_pred CcccceEEEEeCCCCeEEECCCCCCchhce-EEEE-ECCEEEEEeccCCCCccceEEEEECCCCeE-EECCCCCCcccce
Confidence 468889988764221 121111111 2222 2677888887654 478888875431 11111 1111112
Q ss_pred EEEEEcCCCcEEEEEeCC
Q psy15421 274 TSVAFSRSGRLLLAGYDD 291 (340)
Q Consensus 274 ~~~~~s~~~~~l~~g~~d 291 (340)
..+.+ ++++++.|+.+
T Consensus 238 ~~~~~--~~~l~v~GG~~ 253 (315)
T 4asc_A 238 SLVSL--VGTLYAIGGFA 253 (315)
T ss_dssp EEEEE--TTEEEEEEEEE
T ss_pred eEEEE--CCEEEEECCcc
Confidence 22333 56888887764
No 320
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.84 E-value=0.17 Score=42.50 Aligned_cols=162 Identities=12% Similarity=0.128 Sum_probs=79.0
Q ss_pred CeEEEEECCCCceEE--EEecCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCeeee--EecCCCCCeEEEEE
Q psy15421 164 MSCALWDIETGQQCA--SFIGHTGDVMSLSLAPDMRTFVSGACD-----ASAKLWDIRDGSCKQ--TFPGHESDINAVTF 234 (340)
Q Consensus 164 ~~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~sg~~d-----g~i~~wd~~~~~~~~--~~~~h~~~v~~v~~ 234 (340)
..+.+||+.+++-.. .+.........+.+ +++.++.|+.+ ..+..||..+++-.. .++.....-.++.+
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 167 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL 167 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred ceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE
Confidence 457888987764221 11111111222222 56677777643 467889988765221 12211111122222
Q ss_pred ecCCCEEEEEeCC-----CcEEEEeCcCCcEEEEeec-CCcccceEEEEEcCCCcEEEEEeCC-----CcEEEEeCCCce
Q psy15421 235 FPNGWAFATGSDD-----ATCRLFDIRADQELAMYSH-DNIICGITSVAFSRSGRLLLAGYDD-----FNCNVWDSMKTE 303 (340)
Q Consensus 235 ~~~~~~l~s~s~d-----~~i~iwd~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~g~~d-----~~i~iw~~~~~~ 303 (340)
++..++.|+.+ ..+..||..+.+=. .... ......-.++.+ ++++++.|+.+ ..+.+||..+..
T Consensus 168 --~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 168 --NRLLYAVGGFDGTNRLNSAECYYPERNEWR-MITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp --TTEEEEECCBCSSCBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred --CCEEEEEeCCCCCCcCceEEEEeCCCCeEe-eCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 67777777765 45888888654311 1111 111111223333 67888888765 458889876543
Q ss_pred e--eeeeccCCcceEEEEECCCCCEEEEeeCCC
Q psy15421 304 R--AGILAGHDNRVSCLGVTEDGMAVATGSWDS 334 (340)
Q Consensus 304 ~--~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~ 334 (340)
- +..+......-..+.+ ++..++.|+.++
T Consensus 243 W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 273 (308)
T 1zgk_A 243 WTFVAPMKHRRSALGITVH--QGRIYVLGGYDG 273 (308)
T ss_dssp EEECCCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred EEECCCCCCCccceEEEEE--CCEEEEEcCcCC
Confidence 2 2222211111122222 566777777653
No 321
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.77 E-value=0.076 Score=45.71 Aligned_cols=49 Identities=10% Similarity=-0.051 Sum_probs=25.4
Q ss_pred CcEEEEECCCCee--eeEecCCCCCeEEEEEecCCCEEEEEeC------CCcEEEEeC
Q psy15421 206 ASAKLWDIRDGSC--KQTFPGHESDINAVTFFPNGWAFATGSD------DATCRLFDI 255 (340)
Q Consensus 206 g~i~~wd~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~------d~~i~iwd~ 255 (340)
..+.+||..+.+= +..++.....-.+++.. +++.++.|+. ...+..||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEe
Confidence 5788999887652 22222111110223332 5667777664 345677776
No 322
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.67 E-value=0.43 Score=44.70 Aligned_cols=218 Identities=11% Similarity=0.002 Sum_probs=122.9
Q ss_pred EEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcC-CCeE-EEEeCCCeEEEEECCCCceEEEEecCCCCeE
Q psy15421 111 FVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQI-VTSSGDMSCALWDIETGQQCASFIGHTGDVM 188 (340)
Q Consensus 111 ~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~ 188 (340)
+|+.+ ..+.|+..++..... .....+.+ ......+.|.. ++.+ .+-..++.|..+++........+..-...+.
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~--~~~~~~~~-~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~ 83 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNN--NVAIPLTG-VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPE 83 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTC--EEECCCCS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC
T ss_pred EEEEE-eCCcEEEEECCCCCc--ceEEEcCC-CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcc
Confidence 44443 456678888764321 11111112 22345566654 4444 4445678899898875433322222224577
Q ss_pred EEEEcCCCC-EEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecC-CCEEEEE-eCCCcEEEEeCcCCcEEEEee
Q psy15421 189 SLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATG-SDDATCRLFDIRADQELAMYS 265 (340)
Q Consensus 189 ~~~~~~~~~-~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~-s~d~~i~iwd~~~~~~~~~~~ 265 (340)
.+++.+.+. ++.+-...+.|.+.++........+...-.....|+++|. |..+.+- +..+.|...++..........
T Consensus 84 GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~ 163 (628)
T 4a0p_A 84 GMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP 163 (628)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred eEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC
Confidence 888887655 4455566789999998644322223233456789999985 5555554 235678888876544333222
Q ss_pred cCCcccceEEEEEcCCCcEEEEE-eCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEE
Q psy15421 266 HDNIICGITSVAFSRSGRLLLAG-YDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 337 (340)
Q Consensus 266 ~~~~~~~i~~~~~s~~~~~l~~g-~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~ 337 (340)
. ....+.+++++++..|..+ ...+.|..++...... ..+.........+++.. +..+++-...+.|.
T Consensus 164 --~-~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~ 231 (628)
T 4a0p_A 164 --N-VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIE 231 (628)
T ss_dssp --S-CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEE
T ss_pred --C-CCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEE
Confidence 1 2347889999976655554 4567888888654333 23333333445666654 34444544455554
No 323
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.63 E-value=0.031 Score=47.81 Aligned_cols=191 Identities=14% Similarity=0.062 Sum_probs=100.6
Q ss_pred CeEEEEeCCCeEEEEeCCCCCeeEEeeCCC-CcEEEEEEC--C-CCCEEEEE-eCCCeEEEEEccCCCCceEEEEeecC-
Q psy15421 68 RNLVSASQDGKLIVWDSYTTNKVHAIPLRS-SWVMTCAYA--P-SGSFVACG-GLDNICSIYSLKTREGNVRVSRELPG- 141 (340)
Q Consensus 68 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~i~~v~~~--~-~~~~l~~~-~~d~~v~i~~~~~~~~~~~~~~~~~~- 141 (340)
..++.++.||.|.-.|..+++.+..++... .++....-. + ++..++.. ..||.+..++..++ ..+.....+.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G--~~~~~~~~~~l 88 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQG--LQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTE--EEEEEEEHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCC--cEEeeeccccc
Confidence 367889999999999999999888776541 222221100 1 22333333 57888888876543 2223333221
Q ss_pred -CCcceEE--EE-E------cCCCeEEEEeCCCeEEEEECCCCceEEEEecCC--C-----CeEEEEEc-----CCCCEE
Q psy15421 142 -HTGYLSC--CR-F------LDDNQIVTSSGDMSCALWDIETGQQCASFIGHT--G-----DVMSLSLA-----PDMRTF 199 (340)
Q Consensus 142 -~~~~v~~--~~-~------~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~--~-----~v~~~~~~-----~~~~~~ 199 (340)
...++.. -. . ..++.+++++.++.+...|+.+|+.+..+..-. + ...|.... ..+..+
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v 168 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI 168 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence 1111110 00 0 146678899999999999999999988775321 1 01111111 113456
Q ss_pred EEEeCCCcEEEEECCCCee----eeEecCCCCC--e-EEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEE
Q psy15421 200 VSGACDASAKLWDIRDGSC----KQTFPGHESD--I-NAVTFFPNGWAFATGSDDATCRLFDIRADQELA 262 (340)
Q Consensus 200 ~sg~~dg~i~~wd~~~~~~----~~~~~~h~~~--v-~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~ 262 (340)
+.|..+..+.+.+ ++|+. ...+...... + ..-....++.+ +.++.||.|.-+|..++..+.
T Consensus 169 ~ig~~~y~v~~~~-~sG~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 169 VIGKTIFELGIHS-YDGASYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEEECEECC-TTSCCCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred EEecceEEEEEEC-CCCCeEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 6677776666655 44431 0111111000 0 00000123555 346778888888877766654
No 324
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.52 E-value=0.34 Score=41.71 Aligned_cols=228 Identities=12% Similarity=0.141 Sum_probs=118.9
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCee---EEee----CCCCcEEEEEECCC---CCEEEEEe-C-------
Q psy15421 56 AKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKV---HAIP----LRSSWVMTCAYAPS---GSFVACGG-L------- 117 (340)
Q Consensus 56 ~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~---~~~~----~~~~~i~~v~~~~~---~~~l~~~~-~------- 117 (340)
..-+.|+|.|+++.|+.+...|.|++++.. +... ..++ ........++++|+ +.+|+... .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 355899999999833445667999999853 2211 1111 11234688999995 44444332 2
Q ss_pred CCeEEEEEccCCCCceE----EEEeec-----CCCcceEEEEEcCCCeEEEEeCC--------------CeEEEEECCCC
Q psy15421 118 DNICSIYSLKTREGNVR----VSRELP-----GHTGYLSCCRFLDDNQIVTSSGD--------------MSCALWDIETG 174 (340)
Q Consensus 118 d~~v~i~~~~~~~~~~~----~~~~~~-----~~~~~v~~~~~~~~~~l~~~~~d--------------~~v~iwd~~~~ 174 (340)
...|..+++........ +...++ .|. -..+.|.+++.|..+.+| +.|.-++....
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~--~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHF--GGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCC--CCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCccc--CccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 22455555543322221 111222 122 234677778776655544 35666665432
Q ss_pred c------------eEEEE-ecCCCCeEEEEEcC-CCCEEEEEe-CCCcEEEEECCCCee---------------------
Q psy15421 175 Q------------QCASF-IGHTGDVMSLSLAP-DMRTFVSGA-CDASAKLWDIRDGSC--------------------- 218 (340)
Q Consensus 175 ~------------~~~~~-~~~~~~v~~~~~~~-~~~~~~sg~-~dg~i~~wd~~~~~~--------------------- 218 (340)
- ....+ .++ .....++|+| +++++++=. .++.=.|.-+..+..
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~ 253 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAK 253 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCC
T ss_pred CCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCccc
Confidence 0 11111 223 2367899999 565555422 122122222222110
Q ss_pred ----------eeEecCCCCCeEEEEEec-------CCCEEEEEeCCCcEEEEeCcCCcEEEEeec-CCcccceEEEEEcC
Q psy15421 219 ----------KQTFPGHESDINAVTFFP-------NGWAFATGSDDATCRLFDIRADQELAMYSH-DNIICGITSVAFSR 280 (340)
Q Consensus 219 ----------~~~~~~h~~~v~~v~~~~-------~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-~~~~~~i~~~~~s~ 280 (340)
...+.. ...+..++|.. +|.+|++-...+.|...++...+....... ......+..+++.|
T Consensus 254 ~~~~~~~~~P~~~~~~-~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~p 332 (353)
T 2g8s_A 254 GEIVAGTEQPVFYWKD-SPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGP 332 (353)
T ss_dssp BSSCTTSCCCSEEESS-CCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECT
T ss_pred CCCCCCccCCeEEeCC-CcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECC
Confidence 111222 23466778863 466777777778888777765443322111 12223688999999
Q ss_pred CCcEEEEE
Q psy15421 281 SGRLLLAG 288 (340)
Q Consensus 281 ~~~~l~~g 288 (340)
||.++++.
T Consensus 333 dG~lyv~t 340 (353)
T 2g8s_A 333 DGYLYVLT 340 (353)
T ss_dssp TSCEEEEE
T ss_pred CCcEEEEE
Confidence 99876653
No 325
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.47 E-value=0.21 Score=43.10 Aligned_cols=143 Identities=11% Similarity=0.089 Sum_probs=77.5
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeE---e----cCCCCCeEEEEEecC----CCEEEEEeC-------
Q psy15421 185 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT---F----PGHESDINAVTFFPN----GWAFATGSD------- 246 (340)
Q Consensus 185 ~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~---~----~~h~~~v~~v~~~~~----~~~l~s~s~------- 246 (340)
.....|+|.|+++.++.+...|.|++++.. +..... + .........++++|+ +..+++-+.
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 357899999999834445668999999853 432211 1 112345689999995 655555443
Q ss_pred CCcEEEEeCcCC--c---EEEEeec-C---CcccceEEEEEcCCCcEEEEEeCC-------------CcEEEEeCCCce-
Q psy15421 247 DATCRLFDIRAD--Q---ELAMYSH-D---NIICGITSVAFSRSGRLLLAGYDD-------------FNCNVWDSMKTE- 303 (340)
Q Consensus 247 d~~i~iwd~~~~--~---~~~~~~~-~---~~~~~i~~~~~s~~~~~l~~g~~d-------------~~i~iw~~~~~~- 303 (340)
...|..|+.... . ....+.. . ........++|.|||.++++-++. +.|.-++....-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 224655655422 1 1111111 1 001113578999999766664332 456666543210
Q ss_pred -----------eeeee-ccCCcceEEEEECC-CCCEEEE
Q psy15421 304 -----------RAGIL-AGHDNRVSCLGVTE-DGMAVAT 329 (340)
Q Consensus 304 -----------~~~~~-~~h~~~i~~~~~s~-d~~~l~s 329 (340)
....+ .+| .....++|.| +|.++++
T Consensus 177 ~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEE
T ss_pred CCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEE
Confidence 11111 233 4467899999 5654443
No 326
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.36 E-value=0.43 Score=41.12 Aligned_cols=187 Identities=6% Similarity=0.044 Sum_probs=106.8
Q ss_pred cEEEEEEcCCCCeEEEEe------------CCCeEEEEeCCCC--Cee-EEeeC-----CCCcEEEEEECC--CCC-EEE
Q psy15421 57 KIYAMHWGSDSRNLVSAS------------QDGKLIVWDSYTT--NKV-HAIPL-----RSSWVMTCAYAP--SGS-FVA 113 (340)
Q Consensus 57 ~v~~~~~s~~~~~l~s~~------------~d~~i~iwd~~~~--~~~-~~~~~-----~~~~i~~v~~~~--~~~-~l~ 113 (340)
..-++...|+|..+++++ .+|.|.++|..+. +.. ..+.. ..-....+.+.+ ++. +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 345666778876666652 7899999998632 211 11221 112456666644 443 444
Q ss_pred EEe-C--CCeEEEEEccCCCCceEEEEeecCCC-cceEEEEEcCCCeEEEEeC------------------CCeEEEEEC
Q psy15421 114 CGG-L--DNICSIYSLKTREGNVRVSRELPGHT-GYLSCCRFLDDNQIVTSSG------------------DMSCALWDI 171 (340)
Q Consensus 114 ~~~-~--d~~v~i~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~l~~~~~------------------d~~v~iwd~ 171 (340)
.+. . +..+.+|++............+.+.. ...+.+...+++.+..+.. .+.+..+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 443 2 46788988876555555555554432 2234455555555433322 234444544
Q ss_pred CCCceEEEEecCCCCeEEEEEcCCCCEEEEE-eCCCcEEEEECCC-Cee--eeEecCCCCCeEEEEEec-CCCEEEEEeC
Q psy15421 172 ETGQQCASFIGHTGDVMSLSLAPDMRTFVSG-ACDASAKLWDIRD-GSC--KQTFPGHESDINAVTFFP-NGWAFATGSD 246 (340)
Q Consensus 172 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg-~~dg~i~~wd~~~-~~~--~~~~~~h~~~v~~v~~~~-~~~~l~s~s~ 246 (340)
++ +..+...-...+.++|+||++.++.+ +..+.|..|++.. +.. .+.+. ..+..-.+++++ +|.+.+++..
T Consensus 211 --~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~lwva~~~ 286 (355)
T 3sre_A 211 --ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLWVGCHP 286 (355)
T ss_dssp --TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEEEEEES
T ss_pred --Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCcEEEEecC
Confidence 32 22333333457899999999876654 4678999999863 332 22342 245567889999 5988887764
Q ss_pred C
Q psy15421 247 D 247 (340)
Q Consensus 247 d 247 (340)
+
T Consensus 287 ~ 287 (355)
T 3sre_A 287 N 287 (355)
T ss_dssp C
T ss_pred C
Confidence 4
No 327
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.33 E-value=0.55 Score=47.73 Aligned_cols=222 Identities=9% Similarity=0.166 Sum_probs=122.7
Q ss_pred CCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCC
Q psy15421 75 QDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD 154 (340)
Q Consensus 75 ~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 154 (340)
....|.|-|+.++..+..-+...+ +.-.+|..+.+|.-. ..+++|+++.+...... .. ....|..-.|.+.
T Consensus 46 ~~~~vvIidl~~~~~~~rrpi~Ad---sAIMnP~~~iiALra-g~~lQiFnl~~k~klks--~~---~~e~VvfWkWis~ 116 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRRPISAD---SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKA--HT---MTDDVTFWKWISL 116 (1630)
T ss_pred CCceEEEEECCCCCCcccccccch---hhccCCCcceEEEec-CCeEEEeehHHhhhhcc--cc---cCCCceEEEecCC
Confidence 334788888877665422221111 122567777666554 78899999976532111 11 1234555667666
Q ss_pred CeEEEEeCCCeEEEEECCCC-ceEEEEecC----CCCeEEEEEcCCCCEEEE-E------eCCCcEEEEECCCCeeeeEe
Q psy15421 155 NQIVTSSGDMSCALWDIETG-QQCASFIGH----TGDVMSLSLAPDMRTFVS-G------ACDASAKLWDIRDGSCKQTF 222 (340)
Q Consensus 155 ~~l~~~~~d~~v~iwd~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~~~s-g------~~dg~i~~wd~~~~~~~~~~ 222 (340)
..|+.. .+..|.-|++... .+...+..| ...|..-..+++.+.++. | .-.|.+.+|..+.+. .+.+
T Consensus 117 ~~l~lV-T~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~i 194 (1630)
T 1xi4_A 117 NTVALV-TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPI 194 (1630)
T ss_pred CeeEEE-cCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhh
Confidence 666554 4678999999643 233333333 335667777787776542 2 245888899876543 3445
Q ss_pred cCCCCCeEEEEEe--cCCC-EEEEEeC---CCcEEEEeCcCC---cEE------E-EeecCCcccceEEEEEcCCCcEEE
Q psy15421 223 PGHESDINAVTFF--PNGW-AFATGSD---DATCRLFDIRAD---QEL------A-MYSHDNIICGITSVAFSRSGRLLL 286 (340)
Q Consensus 223 ~~h~~~v~~v~~~--~~~~-~l~s~s~---d~~i~iwd~~~~---~~~------~-~~~~~~~~~~i~~~~~s~~~~~l~ 286 (340)
.||......+... +... .|+-+.. -+.+.|-++... .+. . .+..+....=..++..++.-..+.
T Consensus 195 egha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy 274 (1630)
T 1xi4_A 195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF 274 (1630)
T ss_pred hHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEE
Confidence 6665443333222 1111 2221111 156777777432 110 0 111111111134677777777788
Q ss_pred EEeCCCcEEEEeCCCceeeee
Q psy15421 287 AGYDDFNCNVWDSMKTERAGI 307 (340)
Q Consensus 287 ~g~~d~~i~iw~~~~~~~~~~ 307 (340)
.-+.-|.+.+||+.++.++..
T Consensus 275 ~itk~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 275 LITKYGYIHLYDLETGTCIYM 295 (1630)
T ss_pred EEecCceEEEEecccchhhhh
Confidence 888999999999998876553
No 328
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.33 E-value=0.39 Score=40.35 Aligned_cols=208 Identities=11% Similarity=0.069 Sum_probs=95.9
Q ss_pred EEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceE-EEEEcCCCeEEEEeC-----C------CeEEEEECCCCceEEE
Q psy15421 112 VACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLS-CCRFLDDNQIVTSSG-----D------MSCALWDIETGQQCAS 179 (340)
Q Consensus 112 l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~l~~~~~-----d------~~v~iwd~~~~~~~~~ 179 (340)
++.|+ +.+.+||..+.. ... ..++....... ++...++..++.|+. . ..+..||+.+++-. .
T Consensus 8 ~~~GG--~~~~~yd~~~~~--W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~-~ 81 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANE--CYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL-G 81 (315)
T ss_dssp EEEET--TEEEEEETTTTE--EEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE-E
T ss_pred EEEcC--CceEEECCCCCe--Eec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE-E
Confidence 34455 457788876532 322 22222112222 222234445555652 1 12678888776421 1
Q ss_pred EecCCCC--eEEEEEcCCCCEEEEEeCC--------CcEEEEECCCCeee--eEecCCCCCeEEEEEecCCCEEEEEeC-
Q psy15421 180 FIGHTGD--VMSLSLAPDMRTFVSGACD--------ASAKLWDIRDGSCK--QTFPGHESDINAVTFFPNGWAFATGSD- 246 (340)
Q Consensus 180 ~~~~~~~--v~~~~~~~~~~~~~sg~~d--------g~i~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~- 246 (340)
+.....+ -.+++.. ++..++.|+.+ ..+..||..+++=. ..++.....- +++. -+++.++.|+.
T Consensus 82 ~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~ 158 (315)
T 4asc_A 82 MPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGH-TVLS-HMDLVYVIGGKG 158 (315)
T ss_dssp CCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCBC
T ss_pred CCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccce-eEEE-ECCEEEEEeCCC
Confidence 1111111 0122222 56666777632 56888998876422 1121111111 2222 45677777776
Q ss_pred C-----CcEEEEeCcCCcEEEEeec-CCcccceEEEEEcCCCcEEEEEeCCC-----cEEEEeCCCce--eeeeeccCCc
Q psy15421 247 D-----ATCRLFDIRADQELAMYSH-DNIICGITSVAFSRSGRLLLAGYDDF-----NCNVWDSMKTE--RAGILAGHDN 313 (340)
Q Consensus 247 d-----~~i~iwd~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~g~~d~-----~i~iw~~~~~~--~~~~~~~h~~ 313 (340)
+ ..+.+||..+.+= ..... ......-.++.+ ++++++.|+.++ .+.+||..+.. .+..+.....
T Consensus 159 ~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~ 235 (315)
T 4asc_A 159 SDRKCLNKMCVYDPKKFEW-KELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERS 235 (315)
T ss_dssp TTSCBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCB
T ss_pred CCCcccceEEEEeCCCCeE-EECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCccc
Confidence 2 4688888875421 11111 111111222232 678888887654 47788876543 2222221111
Q ss_pred ceEEEEECCCCCEEEEeeCC
Q psy15421 314 RVSCLGVTEDGMAVATGSWD 333 (340)
Q Consensus 314 ~i~~~~~s~d~~~l~s~s~D 333 (340)
.-..+.+ ++..++.|+.+
T Consensus 236 ~~~~~~~--~~~l~v~GG~~ 253 (315)
T 4asc_A 236 SLSLVSL--VGTLYAIGGFA 253 (315)
T ss_dssp SCEEEEE--TTEEEEEEEEE
T ss_pred ceeEEEE--CCEEEEECCcc
Confidence 1122222 55667777764
No 329
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.12 E-value=0.58 Score=40.28 Aligned_cols=225 Identities=11% Similarity=0.072 Sum_probs=119.9
Q ss_pred CcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeec---CCCcceEEEEEcCC----CeEEEEeC----C---
Q psy15421 98 SWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELP---GHTGYLSCCRFLDD----NQIVTSSG----D--- 163 (340)
Q Consensus 98 ~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~----~~l~~~~~----d--- 163 (340)
.....++|.|+|+++++ ..++.|++++. .+. .....++ ........+.+.++ +.|..+.. +
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d~---~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLISP---SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEECS---SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEeC---CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 34568889999985554 55688877752 222 2222221 11234566777664 55444332 3
Q ss_pred -CeEEEEECCCC--c-----eE-EEEec-CCCCeEEEEEcCCCCEEEEEeC-------------CCcEEEEECCCCee--
Q psy15421 164 -MSCALWDIETG--Q-----QC-ASFIG-HTGDVMSLSLAPDMRTFVSGAC-------------DASAKLWDIRDGSC-- 218 (340)
Q Consensus 164 -~~v~iwd~~~~--~-----~~-~~~~~-~~~~v~~~~~~~~~~~~~sg~~-------------dg~i~~wd~~~~~~-- 218 (340)
..|..++.... . .+ ..+.. .......++|.|++.++++-+. .|.|.-++.. ++.
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p~ 182 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE-GRPPA 182 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCCCT
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-CCCCC
Confidence 56777776543 1 11 11221 1113467999999987776432 2455555543 220
Q ss_pred ------eeEe-cCCCCCeEEEEEec-CCCEEEEEeCCC---cEEEEeCcC----------------CcEEEEeecCCccc
Q psy15421 219 ------KQTF-PGHESDINAVTFFP-NGWAFATGSDDA---TCRLFDIRA----------------DQELAMYSHDNIIC 271 (340)
Q Consensus 219 ------~~~~-~~h~~~v~~v~~~~-~~~~l~s~s~d~---~i~iwd~~~----------------~~~~~~~~~~~~~~ 271 (340)
...+ .+|. ....++|+| ++..+++=.... .|.+..... ..++..+. ....
T Consensus 183 ~npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~--~~~~ 259 (354)
T 3a9g_A 183 DNPFPNSPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTG--SETW 259 (354)
T ss_dssp TSSSTTCCEEEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT--TCCC
T ss_pred CCCCCCCcEEEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecC--CCCc
Confidence 0111 2332 345799999 676665543322 133222100 01111111 1112
Q ss_pred ceEEEEEc-------CCCcEEEEEeCCCcEEEEeCCCc-ee---eeeeccCCcceEEEEECCCCCEEEEee
Q psy15421 272 GITSVAFS-------RSGRLLLAGYDDFNCNVWDSMKT-ER---AGILAGHDNRVSCLGVTEDGMAVATGS 331 (340)
Q Consensus 272 ~i~~~~~s-------~~~~~l~~g~~d~~i~iw~~~~~-~~---~~~~~~h~~~i~~~~~s~d~~~l~s~s 331 (340)
.+..++|. .+|.++++....+.|...+.... +. ...+.+-...+..+++.|||.++++..
T Consensus 260 ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 260 APSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred CCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 46788884 46778877777788888876542 22 122333345789999999998777654
No 330
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.89 E-value=1.7 Score=43.78 Aligned_cols=171 Identities=12% Similarity=0.097 Sum_probs=98.7
Q ss_pred CCeEEEEECCCCceEEEE-ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeee-EecCCCCCeEEEEEecCCCE
Q psy15421 163 DMSCALWDIETGQQCASF-IGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ-TFPGHESDINAVTFFPNGWA 240 (340)
Q Consensus 163 d~~v~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~ 240 (340)
.|.|.++++..++..... ....+.|.+++--. | ++++| ...+|++|++...+..+ ....+. .|..+.....+.+
T Consensus 863 ~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~-g-~Lla~-ig~~l~vy~l~~~~~L~~~~~~~~-~i~~~~l~~~~~~ 938 (1158)
T 3ei3_A 863 QGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFN-G-KLLAS-INSTVRLYEWTTEKELRTECNHYN-NIMALYLKTKGDF 938 (1158)
T ss_dssp CEEEEEEEEETTEEEEEEEEEESSCEEEEEEET-T-EEEEE-ETTEEEEEEECTTSCEEEEEEECC-CSCEEEEEEETTE
T ss_pred ceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeC-C-EEEEE-cCCEEEEEECCCCceEEEEeeccc-cEEEEEEeccCCE
Confidence 477999998744322111 23467788877543 4 44443 45899999998654333 111111 1323333334678
Q ss_pred EEEEeCCCcEEEEeCcC-CcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCc-------e-eeeeeccC
Q psy15421 241 FATGSDDATCRLFDIRA-DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT-------E-RAGILAGH 311 (340)
Q Consensus 241 l~s~s~d~~i~iwd~~~-~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~-------~-~~~~~~~h 311 (340)
++.|..-..+.+..++. ...+..+..+.....++++.|-.+ ..++.+..+|++.+...... . ....-.-|
T Consensus 939 I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fh 1017 (1158)
T 3ei3_A 939 ILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFH 1017 (1158)
T ss_dssp EEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEEE
T ss_pred EEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEcc-CcEEEEcCCCcEEEEecCCCCCCccccceeeeEEEEe
Confidence 99998888888876542 334444544444445888888644 46777899999998864321 1 11111223
Q ss_pred -CcceEEEE---ECCC---------CCEEEEeeCCCcEEe
Q psy15421 312 -DNRVSCLG---VTED---------GMAVATGSWDSFLRI 338 (340)
Q Consensus 312 -~~~i~~~~---~s~d---------~~~l~s~s~D~~i~i 338 (340)
.+.|+++. +.+. ...++-++.+|.|-+
T Consensus 1018 lG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~ 1057 (1158)
T 3ei3_A 1018 LGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGL 1057 (1158)
T ss_dssp CSSCEEEEEECCSCCC-------CEEEEEEEEETTSCEEE
T ss_pred CCCcEeeEEeeeeecCCCccccccccceEEEEecCCEEEE
Confidence 34567664 2332 224677888888754
No 331
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.87 E-value=0.066 Score=42.55 Aligned_cols=102 Identities=9% Similarity=0.014 Sum_probs=62.5
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcE------EEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCC
Q psy15421 228 DINAVTFFPNGWAFATGSDDATCRLFDIRADQE------LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 301 (340)
Q Consensus 228 ~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~------~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~ 301 (340)
.+..++|+|+|..++. .+|.++-.+..+.+. -..+...... .-.++.|.|+|.+.++ .||.|+-++-.+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 5669999999987777 677766665533111 1111111111 1368899999999988 568888776432
Q ss_pred ceeee-----eeccC--CcceEEEEECCCCCEEEEeeCCCcE
Q psy15421 302 TERAG-----ILAGH--DNRVSCLGVTEDGMAVATGSWDSFL 336 (340)
Q Consensus 302 ~~~~~-----~~~~h--~~~i~~~~~s~d~~~l~s~s~D~~i 336 (340)
..... ...+. =..+..|.|.|+|.+.+.. |+.+
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 11111 11111 1467899999999866655 7765
No 332
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.68 E-value=0.24 Score=42.53 Aligned_cols=52 Identities=13% Similarity=0.107 Sum_probs=27.9
Q ss_pred CCCeEEEEeC-C---------CeEEEEeCCCCCeeEEeeCC--CCcEEEEEECCCCCEEEEEeCC
Q psy15421 66 DSRNLVSASQ-D---------GKLIVWDSYTTNKVHAIPLR--SSWVMTCAYAPSGSFVACGGLD 118 (340)
Q Consensus 66 ~~~~l~s~~~-d---------~~i~iwd~~~~~~~~~~~~~--~~~i~~v~~~~~~~~l~~~~~d 118 (340)
++++++.||. + ..+.++|..+.+....-... ...-.+++. .++++++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE-ETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE-ECCEEEEEeCcC
Confidence 5666666665 2 35788888776533221111 111122222 567788888765
No 333
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.62 E-value=0.85 Score=38.30 Aligned_cols=215 Identities=13% Similarity=0.120 Sum_probs=99.4
Q ss_pred eEEEEeCCCCCeeEE-eeCCCCcEEEEEECCCCCEEEEEeCC----C-------eEEEEEccCCCCceEEEEeecCCCcc
Q psy15421 78 KLIVWDSYTTNKVHA-IPLRSSWVMTCAYAPSGSFVACGGLD----N-------ICSIYSLKTREGNVRVSRELPGHTGY 145 (340)
Q Consensus 78 ~i~iwd~~~~~~~~~-~~~~~~~i~~v~~~~~~~~l~~~~~d----~-------~v~i~~~~~~~~~~~~~~~~~~~~~~ 145 (340)
.+..||..+.+.... .+.............++..++.|+.. + .+.+||..+. .......++.....
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~ 102 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS--EWVGLPPLPSARCL 102 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTT--EEEECSCBSSCBCS
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCC--cEEECCCCCccccc
Confidence 378888877664331 11111112223344577777888731 1 1555665432 22222222221111
Q ss_pred eEEEEEcCCCeEEEEeCC-------CeEEEEECCCCceEEEEecCCCC--eEEEEEcCCCCEEEEEeC------CCcEEE
Q psy15421 146 LSCCRFLDDNQIVTSSGD-------MSCALWDIETGQQCASFIGHTGD--VMSLSLAPDMRTFVSGAC------DASAKL 210 (340)
Q Consensus 146 v~~~~~~~~~~l~~~~~d-------~~v~iwd~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~sg~~------dg~i~~ 210 (340)
...+. .++..++.|+.+ ..+.+||+.+++-... ...... -.+++. .++++++.|+. -..+..
T Consensus 103 ~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~ 179 (318)
T 2woz_A 103 FGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEV-KNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFI 179 (318)
T ss_dssp CEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEE-CCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEE
T ss_pred cceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeEC-CCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEE
Confidence 11222 244445555543 2477888877542211 111111 012222 35667777764 245889
Q ss_pred EECCCCeeee--EecCCCCCeEEEEEecCCCEEEEEeCC-----CcEEEEeCcCCcEEEEee-cCCcccceEEEEEcCCC
Q psy15421 211 WDIRDGSCKQ--TFPGHESDINAVTFFPNGWAFATGSDD-----ATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSG 282 (340)
Q Consensus 211 wd~~~~~~~~--~~~~h~~~v~~v~~~~~~~~l~s~s~d-----~~i~iwd~~~~~~~~~~~-~~~~~~~i~~~~~s~~~ 282 (340)
||+.+++=.. .++...... +++. -+++.++.|+.+ ..+.+||..+.+=. ... .......-..+.+ ++
T Consensus 180 yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~--~~ 254 (318)
T 2woz_A 180 YNPKKGDWKDLAPMKTPRSMF-GVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNKWE-VMTEFPQERSSISLVSL--AG 254 (318)
T ss_dssp EETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCCEE-ECCCCSSCCBSCEEEEE--TT
T ss_pred EcCCCCEEEECCCCCCCcccc-eEEE-ECCEEEEEcCcCCCCccceEEEEECCCCeEE-ECCCCCCcccceEEEEE--CC
Confidence 9988765221 111111111 2222 256777777654 34678887654311 111 1111111122222 56
Q ss_pred cEEEEEeCC--------------CcEEEEeCCCc
Q psy15421 283 RLLLAGYDD--------------FNCNVWDSMKT 302 (340)
Q Consensus 283 ~~l~~g~~d--------------~~i~iw~~~~~ 302 (340)
++++.|+.+ ..+.+||..+.
T Consensus 255 ~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 255 SLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp EEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred EEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 788887754 34677776554
No 334
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.40 E-value=1.1 Score=42.55 Aligned_cols=193 Identities=10% Similarity=0.089 Sum_probs=97.9
Q ss_pred CCCCeEEEEeCC----CeEEEEeCCCCCeeEEe-e-----CC-C-CcEEEEEECCCCCEEEEEeCCC------eEEEEEc
Q psy15421 65 SDSRNLVSASQD----GKLIVWDSYTTNKVHAI-P-----LR-S-SWVMTCAYAPSGSFVACGGLDN------ICSIYSL 126 (340)
Q Consensus 65 ~~~~~l~s~~~d----~~i~iwd~~~~~~~~~~-~-----~~-~-~~i~~v~~~~~~~~l~~~~~d~------~v~i~~~ 126 (340)
.++..++.||.+ ..+.++|..+.+....- + .. . ..-..+.+..+++.++.||.++ .+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 466777777754 35778888776543322 1 11 1 1122333333777888887543 4566776
Q ss_pred cCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCC--eEEEEECCCCceEEEE-----ecCCCCeEEEEEcCC-CCE
Q psy15421 127 KTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDM--SCALWDIETGQQCASF-----IGHTGDVMSLSLAPD-MRT 198 (340)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~--~v~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~~-~~~ 198 (340)
.+. .+.....++.....-.++.+.++..++.|+.++ .+.+||+.+++-...- ........++.+..+ ++.
T Consensus 476 ~t~--~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 476 KTR--EWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTT--EEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCC--cEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 542 222222222111111222223445556665433 6899999876422111 111112233555555 567
Q ss_pred EEEEeC--C-----CcEEEEECCCCee-----eeEecC---CCCCeEEEEEecCCCEEEEEeC--------CCcEEEEeC
Q psy15421 199 FVSGAC--D-----ASAKLWDIRDGSC-----KQTFPG---HESDINAVTFFPNGWAFATGSD--------DATCRLFDI 255 (340)
Q Consensus 199 ~~sg~~--d-----g~i~~wd~~~~~~-----~~~~~~---h~~~v~~v~~~~~~~~l~s~s~--------d~~i~iwd~ 255 (340)
++.|+. + ..+..||+.+..- ...+.. ....-.+++...++..++.|+. ...+.+||.
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEEC
Confidence 777765 2 4588899887651 111111 1111113333444777888874 345889998
Q ss_pred cCCc
Q psy15421 256 RADQ 259 (340)
Q Consensus 256 ~~~~ 259 (340)
.+.+
T Consensus 634 ~t~~ 637 (695)
T 2zwa_A 634 LSET 637 (695)
T ss_dssp TTTE
T ss_pred CCCe
Confidence 7653
No 335
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.31 E-value=1.2 Score=38.13 Aligned_cols=238 Identities=17% Similarity=0.181 Sum_probs=122.9
Q ss_pred EeEEecCccCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCee--EEee----CCCCcEEEEEECCC----CCEEEEE-
Q psy15421 47 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKV--HAIP----LRSSWVMTCAYAPS----GSFVACG- 115 (340)
Q Consensus 47 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~--~~~~----~~~~~i~~v~~~~~----~~~l~~~- 115 (340)
....+-.....-+.|+|.||+.++++--..|.|++++..+++.. ..++ ........++++|+ +.+.++-
T Consensus 23 ~~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 23 VLRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp EEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred eeEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 33444445566789999999998877655899999986555432 1121 12345789999995 4333332
Q ss_pred -eCCCeEEEEEccCCC-------CceEEEEeec---CCCcceEEEEEcCCCeEEEEeC--------------CCeEEEEE
Q psy15421 116 -GLDNICSIYSLKTRE-------GNVRVSRELP---GHTGYLSCCRFLDDNQIVTSSG--------------DMSCALWD 170 (340)
Q Consensus 116 -~~d~~v~i~~~~~~~-------~~~~~~~~~~---~~~~~v~~~~~~~~~~l~~~~~--------------d~~v~iwd 170 (340)
..++.|.-|.+.... ....+...++ .|. -..+.|.+++.|..+.+ .+.|.-.+
T Consensus 103 ~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~--g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~ 180 (347)
T 3das_A 103 SASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHN--GGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMT 180 (347)
T ss_dssp CSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCC--CCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEEC
T ss_pred cCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCcc--CccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEe
Confidence 234445555554311 1111222233 232 33466777765544322 24444444
Q ss_pred CCCCc-------eEEEE-ecCCCCeEEEEEcCCCCEEEEE-eCCCcEEEEECCCCee------------------eeEec
Q psy15421 171 IETGQ-------QCASF-IGHTGDVMSLSLAPDMRTFVSG-ACDASAKLWDIRDGSC------------------KQTFP 223 (340)
Q Consensus 171 ~~~~~-------~~~~~-~~~~~~v~~~~~~~~~~~~~sg-~~dg~i~~wd~~~~~~------------------~~~~~ 223 (340)
....- ....+ .+|. ....++|+|++.++++= +.|+.=.|--+..+.. +..+.
T Consensus 181 ~dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~ 259 (347)
T 3das_A 181 PDGEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWS 259 (347)
T ss_dssp TTSSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEEC
T ss_pred CCCCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecC
Confidence 43210 00111 2343 35689999988776652 2333222222222211 11222
Q ss_pred CCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEE---EEeecCCcccceEEEEEcCCCcEEEEEe
Q psy15421 224 GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL---AMYSHDNIICGITSVAFSRSGRLLLAGY 289 (340)
Q Consensus 224 ~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~---~~~~~~~~~~~i~~~~~s~~~~~l~~g~ 289 (340)
.+......++|. +|..|...-..+.|....+...... ..+ .......+..++..|||.++++-.
T Consensus 260 ~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~-l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 260 TDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAF-LEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp TTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEE-STTTSSCEEEEEEEETTEEEEEEC
T ss_pred CCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEe-ecCCCCCccEEEECCCCcEEEEEc
Confidence 222345677776 4556666666666666666543321 111 112234688889999987766543
No 336
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.59 E-value=1.7 Score=36.33 Aligned_cols=159 Identities=13% Similarity=0.122 Sum_probs=74.1
Q ss_pred EEEEECCCCceEE--EEecCCCCeEEEEEcCCCCEEEEEeCC-------CcEEEEECCCCeeee--EecCCCCCeEEEEE
Q psy15421 166 CALWDIETGQQCA--SFIGHTGDVMSLSLAPDMRTFVSGACD-------ASAKLWDIRDGSCKQ--TFPGHESDINAVTF 234 (340)
Q Consensus 166 v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~sg~~d-------g~i~~wd~~~~~~~~--~~~~h~~~v~~v~~ 234 (340)
+..||+.+++-.. .+....... +++.. +++.++.|+.+ ..+..||..+++=.. .++.....- +++.
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~ 156 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLF-GLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-NVIS 156 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSC-EEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-EEEE
T ss_pred EEEEeCCCCcEEECCCCCcccccc-ceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-EEEE
Confidence 6778887654221 111111111 22222 56677777754 357788887764221 111111111 2222
Q ss_pred ecCCCEEEEEeC------CCcEEEEeCcCCcEEEEeec-CCcccceEEEEEcCCCcEEEEEeCC-----CcEEEEeCCCc
Q psy15421 235 FPNGWAFATGSD------DATCRLFDIRADQELAMYSH-DNIICGITSVAFSRSGRLLLAGYDD-----FNCNVWDSMKT 302 (340)
Q Consensus 235 ~~~~~~l~s~s~------d~~i~iwd~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~g~~d-----~~i~iw~~~~~ 302 (340)
.++..++.|+. -..+.+||..+.+= ..... ......-.++.+ ++++++.|+.+ ..+.+||..+.
T Consensus 157 -~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 157 -HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW-KDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp -ETTEEEEECCEESSSCBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred -ECCEEEEEcCCCCCCCccceEEEEcCCCCEE-EECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCC
Confidence 46777777764 23588899876431 11111 111111222232 57888887654 24667886543
Q ss_pred e--eeeeeccCCcceEEEEECCCCCEEEEeeCC
Q psy15421 303 E--RAGILAGHDNRVSCLGVTEDGMAVATGSWD 333 (340)
Q Consensus 303 ~--~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D 333 (340)
+ .+..+......-..+. -++..++.|+.+
T Consensus 233 ~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~ 263 (318)
T 2woz_A 233 KWEVMTEFPQERSSISLVS--LAGSLYAIGGFA 263 (318)
T ss_dssp CEEECCCCSSCCBSCEEEE--ETTEEEEECCBC
T ss_pred eEEECCCCCCcccceEEEE--ECCEEEEECCee
Confidence 2 2222222111112222 255677777654
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.47 E-value=3.4 Score=39.13 Aligned_cols=193 Identities=14% Similarity=0.163 Sum_probs=96.1
Q ss_pred CCCCEEEEEeCC----CeEEEEEccCCCCceEEEE-e-----ecCCCcceEEEEEc-CCCeEEEEeCC------CeEEEE
Q psy15421 107 PSGSFVACGGLD----NICSIYSLKTREGNVRVSR-E-----LPGHTGYLSCCRFL-DDNQIVTSSGD------MSCALW 169 (340)
Q Consensus 107 ~~~~~l~~~~~d----~~v~i~~~~~~~~~~~~~~-~-----~~~~~~~v~~~~~~-~~~~l~~~~~d------~~v~iw 169 (340)
.++..++.||.+ +.+.+||..+. .+.... . .+.....-..+... ++..++.|+.+ ..+.+|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~--~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~y 473 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYD--KIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIF 473 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSS--CEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCC--eEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEE
Confidence 456677777753 35667776543 232222 1 11111112222232 33345555432 357788
Q ss_pred ECCCCceEE--EEecCCCCeEEEEEcCCCCEEEEEeCCC--cEEEEECCCCeeeeE-----ecCCCCCeEEEEEecC-CC
Q psy15421 170 DIETGQQCA--SFIGHTGDVMSLSLAPDMRTFVSGACDA--SAKLWDIRDGSCKQT-----FPGHESDINAVTFFPN-GW 239 (340)
Q Consensus 170 d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~sg~~dg--~i~~wd~~~~~~~~~-----~~~h~~~v~~v~~~~~-~~ 239 (340)
|+.+++-.. .+.... .-.+++...+++.++.|+.++ .+.+||..++.=... .+.....-.++.+..+ ++
T Consensus 474 d~~t~~W~~~~~~p~~R-~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~ 552 (695)
T 2zwa_A 474 DMKTREWSMIKSLSHTR-FRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQ 552 (695)
T ss_dssp ETTTTEEEECCCCSBCC-BSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTE
T ss_pred eCCCCcEEECCCCCCCc-ccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCE
Confidence 887753211 111111 112333334788888887654 789999887652111 1111111223555555 67
Q ss_pred EEEEEeC--C-----CcEEEEeCcCCcE-----EEEeec--CCcccceEEEEEcCCCcEEEEEeCC--------CcEEEE
Q psy15421 240 AFATGSD--D-----ATCRLFDIRADQE-----LAMYSH--DNIICGITSVAFSRSGRLLLAGYDD--------FNCNVW 297 (340)
Q Consensus 240 ~l~s~s~--d-----~~i~iwd~~~~~~-----~~~~~~--~~~~~~i~~~~~s~~~~~l~~g~~d--------~~i~iw 297 (340)
.++.|+. + ..+..||..+..- ...... ......-.+ +...++++++.|+.+ ..+.+|
T Consensus 553 iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~v~~y 631 (695)
T 2zwa_A 553 GIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQI-KYITPRKLLIVGGTSPSGLFDRTNSIISL 631 (695)
T ss_dssp EEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEE-EEEETTEEEEECCBCSSCCCCTTTSEEEE
T ss_pred EEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceE-EEeCCCEEEEECCccCCCCCCCCCeEEEE
Confidence 7788776 2 3588899876541 111111 011111222 333347888888743 458899
Q ss_pred eCCCce
Q psy15421 298 DSMKTE 303 (340)
Q Consensus 298 ~~~~~~ 303 (340)
|..+..
T Consensus 632 d~~t~~ 637 (695)
T 2zwa_A 632 DPLSET 637 (695)
T ss_dssp ETTTTE
T ss_pred ECCCCe
Confidence 976554
No 338
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=94.37 E-value=1.9 Score=35.74 Aligned_cols=217 Identities=9% Similarity=-0.024 Sum_probs=104.6
Q ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEE
Q psy15421 100 VMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCAS 179 (340)
Q Consensus 100 i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~ 179 (340)
|..++.... +.+.-. |+.+..|-.....+.. ... . ....+..+.......++. . |+.|..|-....-++..
T Consensus 26 i~~ia~G~~--h~~~l~-~G~v~~wG~n~~Gqlg-~p~--~-~~~~i~~ia~G~~hs~~l-~-~G~v~~wG~n~~Gqlg~ 96 (282)
T 3qhy_B 26 VDAIAGGYF--HGLALK-GGKVLGWGANLNGQLT-MPA--A-TQSGVDAIAAGNYHSLAL-K-DGEVIAWGGNEDGQTTV 96 (282)
T ss_dssp CCEEEECSS--EEEEEE-TTEEEEEECCSSSTTS-CCG--G-GGSCCCEEEECSSEEEEE-E-TTEEEEEECCTTSTTCC
T ss_pred CcEEEeCCC--eEEEEE-CCEEEEEeCCCCCCCC-CCc--c-CCCCEEEEEeCCCEEEEE-E-CCEEEEeeCCCCCCCCC
Confidence 445544432 222224 7888888654322111 100 0 111233333222223333 4 88888887543211111
Q ss_pred EecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCc
Q psy15421 180 FIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 259 (340)
Q Consensus 180 ~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 259 (340)
-......|..++...+...++ . ||.|..|-....-....-......|..++.-.. +.+.-. ||.++.|-.....
T Consensus 97 P~~~~~~v~~ia~G~~hs~al--~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~g 170 (282)
T 3qhy_B 97 PAEARSGVDAIAAGAWASYAL--K-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFG 170 (282)
T ss_dssp CGGGSSSEEEEEEETTEEEEE--E-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTS
T ss_pred CcccCCCeEEEECcCCEEEEE--e-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCC
Confidence 111123577776665543343 4 899999975432111111112345666655433 323333 7999999765322
Q ss_pred EEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEECCCCCEEEEeeCCCcEEec
Q psy15421 260 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 339 (340)
Q Consensus 260 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s~s~D~~i~iW 339 (340)
.+.. + ......|..++-.. ...++. .||.+..|-......+..-..-...|..++...+....++ ||.|..|
T Consensus 171 qlg~-p-~~~~~~v~~i~~G~-~hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~---~g~v~~w 242 (282)
T 3qhy_B 171 QTTV-P-AEAQSGVDDVAGGI-FHSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK---NGKVIAW 242 (282)
T ss_dssp TTSC-C-GGGGSSEEEEEECS-SEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE---TTEEEEE
T ss_pred CCCC-c-eecCCCeEEEEecC-CEEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE---CCEEEEe
Confidence 2210 0 11122366665543 344444 5899999975443333222222345777776666544444 8888877
No 339
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.12 E-value=6.2 Score=37.62 Aligned_cols=264 Identities=16% Similarity=0.089 Sum_probs=138.4
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEE
Q psy15421 56 AKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRV 135 (340)
Q Consensus 56 ~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~ 135 (340)
..|.++....++. |..|..+| +..+|..+.+...........|.++.. .++. +-.+..+ -+..++..+.. ...
T Consensus 63 ~~i~~i~~d~~g~-lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~-lWigt~~-Gl~~~~~~~~~--~~~ 135 (758)
T 3ott_A 63 TRIYCGVIIDNTY-LYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGDT-LWLGALN-GLYTYQLQSRK--LTS 135 (758)
T ss_dssp SCEEEEEEETTTE-EEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETTE-EEEEETT-EEEEEETTTCC--EEE
T ss_pred ceEEEEEEcCCCc-EEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCCc-EEEEcCC-cceeEeCCCCe--EEE
Confidence 4688887777664 44455555 788998765322111111234665544 3454 4445555 46667764422 111
Q ss_pred EEee-c-CCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecC------CCCeEEEEEcCCCCEEEEEeCCCc
Q psy15421 136 SREL-P-GHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGH------TGDVMSLSLAPDMRTFVSGACDAS 207 (340)
Q Consensus 136 ~~~~-~-~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~sg~~dg~ 207 (340)
.... . .....+.++....++.+-.++.+ -+..++..+++.. .+... ...|.++...+++..+-.|.. +-
T Consensus 136 ~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~G 212 (758)
T 3ott_A 136 FDTRRNGLPNNTIYSIIRTKDNQIYVGTYN-GLCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GY 212 (758)
T ss_dssp ECHHHHCCSCSCEEEEEECTTCCEEEEETT-EEEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EE
T ss_pred eccCCCCcCCCeEEEEEEcCCCCEEEEeCC-CHhhCccCCCceE-EecCCCccccccceeEEEEEECCCCEEEEEEC-CC
Confidence 1000 0 11234555555455666556654 4777887765432 22111 123778888777665444553 45
Q ss_pred EEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCC------cccceEEEEEcCC
Q psy15421 208 AKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDN------IICGITSVAFSRS 281 (340)
Q Consensus 208 i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~------~~~~i~~~~~s~~ 281 (340)
+..+|..+++......-....|.++...++|...+ |+. +-+.+++..+.+... +.+.. ....|.++...++
T Consensus 213 l~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~D~~ 289 (758)
T 3ott_A 213 LFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDTTPLQH-IIHDSRNIQSLTNNIIWNIFADQE 289 (758)
T ss_dssp EEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EET-TEEEEECCTTSCCEE-ECCCTTCTTSCSCSCEEEEEECTT
T ss_pred CeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeC-CceeEEecCCCcEEE-EEcCCCCcCcCCcCeEEEEEEcCC
Confidence 78888877654221111123578888887776554 444 457788876543322 21110 1124788888887
Q ss_pred CcEEEEEeCCCcEEEEeCCCceeeeeec-------cCCcceEEEEECCCCCEEEEeeCCCcEE
Q psy15421 282 GRLLLAGYDDFNCNVWDSMKTERAGILA-------GHDNRVSCLGVTEDGMAVATGSWDSFLR 337 (340)
Q Consensus 282 ~~~l~~g~~d~~i~iw~~~~~~~~~~~~-------~h~~~i~~~~~s~d~~~l~s~s~D~~i~ 337 (340)
|.+- .|+..| +.++.. .. ....+. .....|.++...++|.+.+. +.+|..+
T Consensus 290 g~lW-iGT~~G-l~~~~~-~~-~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiG-t~~Gl~~ 347 (758)
T 3ott_A 290 HNIW-LGTDYG-ISLSRY-NS-ALQFIPISQITGTGDGNQFYSLFRDSKGFYWFG-GANGLIR 347 (758)
T ss_dssp CCEE-EEESSS-EEEECC-CC--CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEE-ETTEEEE
T ss_pred CCEE-EEeCCc-cccccc-CC-ceeEEecccCCCCCCCceEEEEEEcCCCCEEEe-eCCccee
Confidence 7654 455566 554432 11 111110 11346888888888876554 4555443
No 340
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.07 E-value=4.7 Score=36.06 Aligned_cols=107 Identities=11% Similarity=0.063 Sum_probs=61.7
Q ss_pred CCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCe---eeeEec-----C----CCCCeEEEEEecC----CCEEEEEeCC
Q psy15421 185 GDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGS---CKQTFP-----G----HESDINAVTFFPN----GWAFATGSDD 247 (340)
Q Consensus 185 ~~v~~~~~~~~~~-~~~sg~~dg~i~~wd~~~~~---~~~~~~-----~----h~~~v~~v~~~~~----~~~l~s~s~d 247 (340)
.....|+|.|++. .++.+...|.|++++..... .+..+. + .+.....|+|+|+ +..+++-+.+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4578999999986 45566789999999753221 122221 1 1345788999996 5566655432
Q ss_pred C------------cEEEEeCcC----------CcEEEEeecCCcccceEEEEEcCCCcEEEEEeCC
Q psy15421 248 A------------TCRLFDIRA----------DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD 291 (340)
Q Consensus 248 ~------------~i~iwd~~~----------~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d 291 (340)
. .|.-|.+.. .+.+..............++|.|||+++++-++.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 333354431 1222222211111235789999999877765543
No 341
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=92.38 E-value=4.1 Score=33.65 Aligned_cols=246 Identities=13% Similarity=0.062 Sum_probs=117.1
Q ss_pred cEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEccCCCCceEEE
Q psy15421 57 KIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVS 136 (340)
Q Consensus 57 ~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~ 136 (340)
.|..++-... ..+.-. ||.|+.|-......+-.-......|..++...+-..++ . |+.+..|-.....+.- ..
T Consensus 25 ~i~~ia~G~~--h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l--~-~G~v~~wG~n~~Gqlg-~P 97 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLAL--K-DGEVIAWGGNEDGQTT-VP 97 (282)
T ss_dssp SCCEEEECSS--EEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEE--E-TTEEEEEECCTTSTTC-CC
T ss_pred CCcEEEeCCC--eEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEE--E-CCEEEEeeCCCCCCCC-CC
Confidence 4556654433 222234 89999996543221110001112355555443322222 4 7888877654322111 11
Q ss_pred EeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy15421 137 RELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG 216 (340)
Q Consensus 137 ~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~ 216 (340)
..+ ...+..+..... ..++-. |+.|..|-....-++.........+..++.-.+...++ . ||.|..|-....
T Consensus 98 ~~~---~~~v~~ia~G~~-hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l--~-~G~v~~wG~n~~ 169 (282)
T 3qhy_B 98 AEA---RSGVDAIAAGAW-ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAV--K-NGGVIAWGDNYF 169 (282)
T ss_dssp GGG---SSSEEEEEEETT-EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEE--E-TTEEEEEECCTT
T ss_pred ccc---CCCeEEEECcCC-EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEE--E-CCEEEEecCCCC
Confidence 111 123333332222 333334 89999997543221111111223466666544433333 3 789988865432
Q ss_pred eeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEE
Q psy15421 217 SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNV 296 (340)
Q Consensus 217 ~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~i 296 (340)
-.+..-..-...|..|+.-... .++. .||.++.|-......+. .+. .....|..++-... ..++.. |+.+..
T Consensus 170 gqlg~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg-~p~-~~~~~v~~i~~G~~-h~~al~--~g~v~~ 241 (282)
T 3qhy_B 170 GQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTT-VPT-EALSGVSAIASGEW-YSLALK--NGKVIA 241 (282)
T ss_dssp STTSCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTC-CCG-GGGSSCCEEEECSS-CEEEEE--TTEEEE
T ss_pred CCCCCceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCC-CCc-ccCCCceEEEcCCC-EEEEEE--CCEEEE
Confidence 1111111113457676655433 2333 59999999765432221 111 11223666665443 344443 899999
Q ss_pred EeCCCceeeeeeccCCcceEEEEECCCCCEEEE
Q psy15421 297 WDSMKTERAGILAGHDNRVSCLGVTEDGMAVAT 329 (340)
Q Consensus 297 w~~~~~~~~~~~~~h~~~i~~~~~s~d~~~l~s 329 (340)
|-.....+... ...|..++..+...+.++
T Consensus 242 wG~n~~gq~~v----~~~v~~iaaG~~h~~al~ 270 (282)
T 3qhy_B 242 WGSSRTAPSSV----QSGVSSIEAGPNAAYALK 270 (282)
T ss_dssp ESTTCCCCGGG----SSCEEEEEECSSCEEEEE
T ss_pred ecCCCCccccC----CCCcEEEEECcCeEEEEe
Confidence 97554433332 346777777776655444
No 342
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.21 E-value=1 Score=40.97 Aligned_cols=102 Identities=15% Similarity=0.129 Sum_probs=64.4
Q ss_pred eEEEEEecCCCEEEEEe-CCCcEEEEeCcCCcE-----E-----EEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEE
Q psy15421 229 INAVTFFPNGWAFATGS-DDATCRLFDIRADQE-----L-----AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 297 (340)
Q Consensus 229 v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~~~~-----~-----~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw 297 (340)
...+.++|||++++.++ -+.++.++|+..... + ..........+..-.+|.++|.-..+-.-|..|--|
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkW 404 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKW 404 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEE
Confidence 34688999999876654 488999999874211 0 011122234457889999999766677789999999
Q ss_pred eCCCc----------eeeeeeccCCcceEEE-----EECCCCCEEEEe
Q psy15421 298 DSMKT----------ERAGILAGHDNRVSCL-----GVTEDGMAVATG 330 (340)
Q Consensus 298 ~~~~~----------~~~~~~~~h~~~i~~~-----~~s~d~~~l~s~ 330 (340)
++... +.+..+.-|-.+---. .-.|||++|++.
T Consensus 405 ni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~l 452 (638)
T 3sbq_A 405 NMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVAL 452 (638)
T ss_dssp EHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEE
T ss_pred eccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEe
Confidence 97543 2334444343221111 225788888875
No 343
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=91.63 E-value=6.8 Score=34.65 Aligned_cols=176 Identities=10% Similarity=0.146 Sum_probs=105.2
Q ss_pred CCeEEEEeCCC-CCeeEEeeCC----CCcEEEEEECCCCCEEEEEeC-------CCeEEEEEccCCCCceEEEEeecCCC
Q psy15421 76 DGKLIVWDSYT-TNKVHAIPLR----SSWVMTCAYAPSGSFVACGGL-------DNICSIYSLKTREGNVRVSRELPGHT 143 (340)
Q Consensus 76 d~~i~iwd~~~-~~~~~~~~~~----~~~i~~v~~~~~~~~l~~~~~-------d~~v~i~~~~~~~~~~~~~~~~~~~~ 143 (340)
+..|+-|+++. ......+..| +..|..-..+++.+.++..|- .|.+++|....+ ....+.+|.
T Consensus 124 ~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-----~sQ~ieGha 198 (494)
T 1bpo_A 124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-----VSQPIEGHA 198 (494)
T ss_dssp SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-----CEEEECCSE
T ss_pred CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-----ccchheeee
Confidence 34788888764 2334444443 345777777888888765442 367888887543 344567777
Q ss_pred cceEEEEEcCC---CeEEE-EeC---CCeEEEEECCCC---c------eEEEEe---cCCCCeEEEEEcCCCCEEEEEeC
Q psy15421 144 GYLSCCRFLDD---NQIVT-SSG---DMSCALWDIETG---Q------QCASFI---GHTGDVMSLSLAPDMRTFVSGAC 204 (340)
Q Consensus 144 ~~v~~~~~~~~---~~l~~-~~~---d~~v~iwd~~~~---~------~~~~~~---~~~~~v~~~~~~~~~~~~~sg~~ 204 (340)
.....+....+ ..+++ +.. .+.+.+-++... . .+..+. ...+...++..++....++.-..
T Consensus 199 a~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK 278 (494)
T 1bpo_A 199 ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITK 278 (494)
T ss_dssp EEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEET
T ss_pred eeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEec
Confidence 65544443221 12333 322 378888888432 1 111111 23456778999998888888899
Q ss_pred CCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCc
Q psy15421 205 DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR 256 (340)
Q Consensus 205 dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 256 (340)
-|.|.+||+.++.++..-+--..+|-.-+-.....-++.....|.|.--.+.
T Consensus 279 ~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~ 330 (494)
T 1bpo_A 279 YGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 330 (494)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEEC
T ss_pred CceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEc
Confidence 9999999999999876555444555444444443344444455555444433
No 344
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=91.57 E-value=1.6 Score=37.17 Aligned_cols=112 Identities=7% Similarity=0.026 Sum_probs=69.8
Q ss_pred CEEEEEeCCCcEEEEECCCCeeeeEecCC-CCCeEEEEEe--c-CCCEEEEE-eCCCcEEEEeCcCCcEEEEeecCCccc
Q psy15421 197 RTFVSGACDASAKLWDIRDGSCKQTFPGH-ESDINAVTFF--P-NGWAFATG-SDDATCRLFDIRADQELAMYSHDNIIC 271 (340)
Q Consensus 197 ~~~~sg~~dg~i~~wd~~~~~~~~~~~~h-~~~v~~v~~~--~-~~~~l~s~-s~d~~i~iwd~~~~~~~~~~~~~~~~~ 271 (340)
..++.++.||.|.-.|..+|+..-.++.. ..++....-. + ++..++.. ..||.|..++..++.....+.......
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 36788999999999999999887666532 1222221100 1 23334443 589999999987765444333222110
Q ss_pred ceEEEEEc-----------CCCcEEEEEeCCCcEEEEeCCCceeeeeec
Q psy15421 272 GITSVAFS-----------RSGRLLLAGYDDFNCNVWDSMKTERAGILA 309 (340)
Q Consensus 272 ~i~~~~~s-----------~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~ 309 (340)
..-+... ..+..+.+|+.++.+...|..+++.+-.+.
T Consensus 91 -~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 91 -TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp -TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred -ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 1111211 145678899999999999999998877664
No 345
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=91.49 E-value=9.9 Score=39.05 Aligned_cols=159 Identities=11% Similarity=0.212 Sum_probs=90.2
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCC-CeeEEeeCC----CCcEEEEEECCCCCEEEEEe-------CCCeEEE
Q psy15421 56 AKIYAMHWGSDSRNLVSASQDGKLIVWDSYTT-NKVHAIPLR----SSWVMTCAYAPSGSFVACGG-------LDNICSI 123 (340)
Q Consensus 56 ~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~----~~~i~~v~~~~~~~~l~~~~-------~d~~v~i 123 (340)
.+|.-=.|-.+... +-. .+..|+-|++... .....+..| +..|..-..+++.+.++..| -.|.+++
T Consensus 106 e~VvfWkWis~~~l-~lV-T~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQL 183 (1630)
T 1xi4_A 106 DDVTFWKWISLNTV-ALV-TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQL 183 (1630)
T ss_pred CCceEEEecCCCee-EEE-cCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeee
Confidence 34555555443332 222 2347999998642 222233322 34566667778888776543 3477888
Q ss_pred EEccCCCCceEEEEeecCCCcceEEEEEc---CCCeEEEEe----CCCeEEEEECCCC---c-e-----EEEEec---CC
Q psy15421 124 YSLKTREGNVRVSRELPGHTGYLSCCRFL---DDNQIVTSS----GDMSCALWDIETG---Q-Q-----CASFIG---HT 184 (340)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~l~~~~----~d~~v~iwd~~~~---~-~-----~~~~~~---~~ 184 (340)
|....+ ....+.||.......... ....+++-. ..+.+.|-++... . . +..+.. ..
T Consensus 184 yS~er~-----~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~ 258 (1630)
T 1xi4_A 184 YSVDRK-----VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQN 258 (1630)
T ss_pred eecccc-----cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCccccc
Confidence 887543 233445665544333321 112233321 1367888887432 1 1 111111 24
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeE
Q psy15421 185 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT 221 (340)
Q Consensus 185 ~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~ 221 (340)
+...++..++....++.-..-|.|.++|+.++.++..
T Consensus 259 Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 259 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 295 (1630)
T ss_pred CcceEEEeccccCEEEEEecCceEEEEecccchhhhh
Confidence 4566788888877888888999999999999987643
No 346
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=91.43 E-value=6 Score=33.58 Aligned_cols=193 Identities=10% Similarity=0.145 Sum_probs=112.0
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEeCCC-CCeeEEeeCC----CCcEEEEEECCCCCEEEEEeC-------CCeEEE
Q psy15421 56 AKIYAMHWGSDSRNLVSASQDGKLIVWDSYT-TNKVHAIPLR----SSWVMTCAYAPSGSFVACGGL-------DNICSI 123 (340)
Q Consensus 56 ~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~----~~~i~~v~~~~~~~~l~~~~~-------d~~v~i 123 (340)
.+|.-=.|-.+. .|+-.. +..|+-|+++. ......+..| ...|..-..+++.+.++..|- .|.+++
T Consensus 107 e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQL 184 (365)
T 2xzh_A 107 DDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQL 184 (365)
T ss_dssp SCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEE
T ss_pred CccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEE
Confidence 455555564443 333333 34799999864 3344445444 345777777888887766542 256788
Q ss_pred EEccCCCCceEEEEeecCCCcceEEEEEcCC---CeEEE-EeC---CCeEEEEECCCC---c------eEEEEec---CC
Q psy15421 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLDD---NQIVT-SSG---DMSCALWDIETG---Q------QCASFIG---HT 184 (340)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~l~~-~~~---d~~v~iwd~~~~---~------~~~~~~~---~~ 184 (340)
|....+ ....+.+|......+..... ..+++ +.. .+.+.+-++... . .+..+.. ..
T Consensus 185 YS~er~-----~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~ 259 (365)
T 2xzh_A 185 YSVDRK-----VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQN 259 (365)
T ss_dssp EETTTT-----EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTT
T ss_pred Eeeccc-----ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccC
Confidence 887543 34556777765443333211 12333 221 257888887432 1 1112222 34
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeC
Q psy15421 185 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI 255 (340)
Q Consensus 185 ~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~ 255 (340)
+...++..++....++.-..-|.|.+||++++.++..-+--..+|-..+-+....-++.....|.|.--.+
T Consensus 260 DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v 330 (365)
T 2xzh_A 260 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCV 330 (365)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEE
T ss_pred CceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEE
Confidence 56778888888888888889999999999999987665544455544444433333444445555444433
No 347
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=89.18 E-value=12 Score=33.37 Aligned_cols=61 Identities=18% Similarity=0.378 Sum_probs=38.6
Q ss_pred cCcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCee--EEeeC------CCCcEEEEEECCC---CCEEEEE
Q psy15421 55 LAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKV--HAIPL------RSSWVMTCAYAPS---GSFVACG 115 (340)
Q Consensus 55 ~~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~--~~~~~------~~~~i~~v~~~~~---~~~l~~~ 115 (340)
...-+.|+|.|+|+++++--..+.|++++..+++.. ..+.. .......++|+|+ +.+|+..
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 345679999999997776544457888876555432 22221 1345778999995 4444433
No 348
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=86.55 E-value=22 Score=33.71 Aligned_cols=269 Identities=12% Similarity=0.034 Sum_probs=142.3
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCC--eeEEee-------CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Q psy15421 56 AKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTN--KVHAIP-------LRSSWVMTCAYAPSGSFVACGGLDNICSIYSL 126 (340)
Q Consensus 56 ~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~--~~~~~~-------~~~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~ 126 (340)
..|.++.-.++|.+-+ |..+| +..++..+++ ....+. .....|.++.-..++.+.+ |. ++-+..++.
T Consensus 324 ~~v~~i~~D~~g~lWi-Gt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWi-gt-~~GL~~~~~ 399 (758)
T 3ott_A 324 NQFYSLFRDSKGFYWF-GGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWI-AT-DGSINRYDY 399 (758)
T ss_dssp CBEEEEEECTTCCEEE-EETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEE-EE-TTEEEEEET
T ss_pred ceEEEEEEcCCCCEEE-eeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEE-Ee-CCcHhhcCc
Confidence 4688888877777654 44555 5566654321 111111 1224588888788887665 33 345777876
Q ss_pred cCCCCceEEEEeecC----CCcceEEEEEcCCCeEEEEeCCCeEEEEECCCC-----ceE---EEEec----CCCCeEEE
Q psy15421 127 KTREGNVRVSRELPG----HTGYLSCCRFLDDNQIVTSSGDMSCALWDIETG-----QQC---ASFIG----HTGDVMSL 190 (340)
Q Consensus 127 ~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~~~-----~~~---~~~~~----~~~~v~~~ 190 (340)
.++. ......... ....|.++....++.|-.|+..+-+..+|..+. ... ..+.. ....|.++
T Consensus 400 ~~~~--~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i 477 (758)
T 3ott_A 400 ATRQ--FIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQI 477 (758)
T ss_dssp TTTE--EEEEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEE
T ss_pred CCCc--EEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEccccccccCCcceecccccccccccccceeeeE
Confidence 5432 211111111 123466665555677777776666788876431 111 11111 12348888
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCeeeeEecC-C--CCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcEEEEeecC
Q psy15421 191 SLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG-H--ESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD 267 (340)
Q Consensus 191 ~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~~~-h--~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~ 267 (340)
...+++.+.+.++..+-|..+|.++++....... . ...+.++....+|...+. +..| +..+|..+.+... +...
T Consensus 478 ~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~G-l~~~~~~~~~~~~-~~~~ 554 (758)
T 3ott_A 478 IPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FHGG-VMRINPKDESQQS-ISFG 554 (758)
T ss_dssp EECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ETTE-EEEECC--CCCCB-CCCC
T ss_pred EEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ecCc-eEEEecCCCceEE-eccc
Confidence 8888888877444445688889887764432211 1 245788888888876654 4444 7778765443211 1111
Q ss_pred Cc-ccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEEE-CCCCCEEEEeeCCCcEEe
Q psy15421 268 NI-ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGV-TEDGMAVATGSWDSFLRI 338 (340)
Q Consensus 268 ~~-~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~~-s~d~~~l~s~s~D~~i~i 338 (340)
.. ...|.++... +|. |-.++.+| +..++..+.+.. .+.-....++...+ .++|. |.-|+.+|.+++
T Consensus 555 gl~~~~i~~i~~~-~g~-lWi~t~~G-l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~G~-l~fG~~~Gl~~f 622 (758)
T 3ott_A 555 SFSNNEILSMTCV-KNS-IWVSTTNG-LWIIDRKTMDAR-QQNMTNKRFTSLLFDPKEDC-VYLGGADGFGIS 622 (758)
T ss_dssp C---CCEEEEEEE-TTE-EEEEESSC-EEEEETTTCCEE-EC--CCCCCSEEEEETTTTE-EEEECBSEEEEE
T ss_pred CCCccceEEEEEC-CCC-EEEECCCC-eEEEcCCCceeE-EecCCCCceeeeEEECCCCc-EEEecCCceEEE
Confidence 11 1236666654 554 55556666 667776554332 11111122333333 45775 555666776653
No 349
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=85.89 E-value=21 Score=32.73 Aligned_cols=73 Identities=12% Similarity=0.050 Sum_probs=51.6
Q ss_pred CCCeEEEEEcCCCCEEEEE-eCCCcEEEEECCCC------ee-------eeEecCCCCCeEEEEEecCCCEEEEEeCCCc
Q psy15421 184 TGDVMSLSLAPDMRTFVSG-ACDASAKLWDIRDG------SC-------KQTFPGHESDINAVTFFPNGWAFATGSDDAT 249 (340)
Q Consensus 184 ~~~v~~~~~~~~~~~~~sg-~~dg~i~~wd~~~~------~~-------~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~ 249 (340)
....-.+.++|||++++.+ -.+.++.++|++.- +. ....+ -.-...-.+|+++|..+.|---|..
T Consensus 322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSq 400 (638)
T 3sbq_A 322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQ 400 (638)
T ss_dssp SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTE
T ss_pred CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecce
Confidence 3345578899999988764 46999999998731 11 11222 2334567899999976777778999
Q ss_pred EEEEeCcC
Q psy15421 250 CRLFDIRA 257 (340)
Q Consensus 250 i~iwd~~~ 257 (340)
|--|++..
T Consensus 401 vvkWni~~ 408 (638)
T 3sbq_A 401 VVKWNMEE 408 (638)
T ss_dssp EEEEEHHH
T ss_pred EEEEeccH
Confidence 99999864
No 350
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.88 E-value=6.8 Score=38.60 Aligned_cols=38 Identities=37% Similarity=0.244 Sum_probs=32.9
Q ss_pred cEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEee
Q psy15421 57 KIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIP 94 (340)
Q Consensus 57 ~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 94 (340)
.+.+++..++..++++.+.|+++|+||+.+++.+.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56778888888999999999999999999998876654
No 351
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=78.94 E-value=27 Score=29.01 Aligned_cols=122 Identities=8% Similarity=-0.119 Sum_probs=64.1
Q ss_pred CeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEe----CCCcEEEEECCCCeeeeEecCCCCCeEEEEEecCCC
Q psy15421 164 MSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGA----CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW 239 (340)
Q Consensus 164 ~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~----~dg~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~ 239 (340)
..|...++...+.. .+.. .. ...++|+++.++-.. .+..|..-++.. .....+..+.. .+++|+++
T Consensus 88 ~~Iy~i~~dg~~~~-~l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG-s~~~~lt~~~~----~~~~~~g~ 157 (302)
T 3s25_A 88 NSLCRIKRNGHGST-VLDP--DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDG-EEKKKIKNHYL----FTCNTSDR 157 (302)
T ss_dssp EEEEEEETTSCCCE-EEEC--SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTS-CCCEEEESSCC----CCSEEETT
T ss_pred CeEEEEeCCCCcce-Eeec--CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCC-CCeEEEeCCCc----eEeeEECC
Confidence 45777777765432 2221 11 235677777776544 344555556553 33333433322 34577777
Q ss_pred EEEEEe-CCCcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeCC--CcEEEEeCCC
Q psy15421 240 AFATGS-DDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD--FNCNVWDSMK 301 (340)
Q Consensus 240 ~l~s~s-~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d--~~i~iw~~~~ 301 (340)
.|.=.+ ....|..-++........+. .. . ...++|++.+|+-...+ ..|..-++..
T Consensus 158 ~iy~t~~g~~~Iy~~~l~g~~~~~l~~--~~---~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG 216 (302)
T 3s25_A 158 YFYYNNPKNGQLYRYDTASQSEALFYD--CN---C-YKPVVLDDTNVYYMDVNRDNAIVHVNINN 216 (302)
T ss_dssp EEEEECTTTCCEEEEETTTTEEEEEEC--SC---E-EEEEEEETTEEEEEEGGGTTEEEEECSSS
T ss_pred EEEEEeCCCceEEEEECCCCCEEEEeC--CC---c-cceeeecCCEEEEEEcCCCcEEEEEECCC
Confidence 666433 36778887776654433322 11 1 22456888888765543 3455555433
No 352
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=78.18 E-value=33 Score=29.64 Aligned_cols=167 Identities=7% Similarity=0.124 Sum_probs=94.3
Q ss_pred CeEEEEECCCC--ceEEEEec------CCCCeEEEEEc---CC----CCE-EEEEeCCCcEEEEECCCCeeeeEec----
Q psy15421 164 MSCALWDIETG--QQCASFIG------HTGDVMSLSLA---PD----MRT-FVSGACDASAKLWDIRDGSCKQTFP---- 223 (340)
Q Consensus 164 ~~v~iwd~~~~--~~~~~~~~------~~~~v~~~~~~---~~----~~~-~~sg~~dg~i~~wd~~~~~~~~~~~---- 223 (340)
-.+.+||+.++ +.++++.- ..+.+..+++. |. ..+ +++=+..+-|.++|+.+++..+.+.
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 35677888888 77766542 13346777776 32 233 3444467899999999987655441
Q ss_pred CC--------------CCCeEEEEEecC----CCEEEEEeCCCcEEEEeCc-----CC---cEEEEeecCCcccceEEEE
Q psy15421 224 GH--------------ESDINAVTFFPN----GWAFATGSDDATCRLFDIR-----AD---QELAMYSHDNIICGITSVA 277 (340)
Q Consensus 224 ~h--------------~~~v~~v~~~~~----~~~l~s~s~d~~i~iwd~~-----~~---~~~~~~~~~~~~~~i~~~~ 277 (340)
.. ...+..++++|+ ++.|.=..-.+. ++|.+. .. ..+..++.......-..++
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALA 281 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEE
Confidence 10 124677888886 444433322221 233221 11 1122222222112233556
Q ss_pred Ec-CCCcEEEEEeCCCcEEEEeCCC-c---eeeeeecc--CCcceEEEEECCCCCEEEEee
Q psy15421 278 FS-RSGRLLLAGYDDFNCNVWDSMK-T---ERAGILAG--HDNRVSCLGVTEDGMAVATGS 331 (340)
Q Consensus 278 ~s-~~~~~l~~g~~d~~i~iw~~~~-~---~~~~~~~~--h~~~i~~~~~s~d~~~l~s~s 331 (340)
+. .+|.++++--....|..|+..+ . +....+.. -..+...+++.++|.+.+..+
T Consensus 282 ~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 282 YDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp ECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred EeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 75 6788888888889999999754 1 12233322 234578888888887666543
No 353
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=71.04 E-value=6.8 Score=38.59 Aligned_cols=37 Identities=19% Similarity=0.343 Sum_probs=32.1
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEe
Q psy15421 186 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF 222 (340)
Q Consensus 186 ~v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~ 222 (340)
.+.+++..++..++++-+.|+++|+|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 3567788888899999999999999999999987754
No 354
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=66.28 E-value=58 Score=27.35 Aligned_cols=178 Identities=7% Similarity=0.004 Sum_probs=92.7
Q ss_pred CCeEEEEeCCCeEEEEECCCCce-------EEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC--CCe-------
Q psy15421 154 DNQIVTSSGDMSCALWDIETGQQ-------CASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIR--DGS------- 217 (340)
Q Consensus 154 ~~~l~~~~~d~~v~iwd~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~~~sg~~dg~i~~wd~~--~~~------- 217 (340)
+..++..+.+|.++--.+..-.. ...+.. .+.+..+........++..+..|.+..+... .-.
T Consensus 109 e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~ 187 (327)
T 3uc1_A 109 APYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATS 187 (327)
T ss_dssp SSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSB
T ss_pred CCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCC
Confidence 45789999999999888654221 112222 3456666666666677788889998888765 211
Q ss_pred --eeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcCCcE-------EEEeecCCcccceEEEEEcCCCcEEEEE
Q psy15421 218 --CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE-------LAMYSHDNIICGITSVAFSRSGRLLLAG 288 (340)
Q Consensus 218 --~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~-------~~~~~~~~~~~~i~~~~~s~~~~~l~~g 288 (340)
..-.+. ....|.++...+.+.+++..+..|.++.-.+..... +..+........+..+....+...++..
T Consensus 188 Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~ 266 (327)
T 3uc1_A 188 GVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAV 266 (327)
T ss_dssp CEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEE
T ss_pred CeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEE
Confidence 111122 234576766666667899999999999887543211 1111111101223344333344566666
Q ss_pred eCCCcEEEEeCCCceeee---------eeccCCcceEEEEEC-CCCCEEEEeeCCC
Q psy15421 289 YDDFNCNVWDSMKTERAG---------ILAGHDNRVSCLGVT-EDGMAVATGSWDS 334 (340)
Q Consensus 289 ~~d~~i~iw~~~~~~~~~---------~~~~h~~~i~~~~~s-~d~~~l~s~s~D~ 334 (340)
+.+|.+--++........ .+. ..+.|.++..- ++...+++.+.+|
T Consensus 267 T~~G~~ir~~~~~i~~~gR~a~GV~~i~l~-~~d~vv~~~~~~~~~~~~~~~~~~g 321 (327)
T 3uc1_A 267 TSGGGVIRTAARQVRKAGRQTKGVRLMNLG-EGDTLLAIARNAEESGDDNAVDANG 321 (327)
T ss_dssp EGGGCEEEEEGGGSCBCCTTSCCEECTTCC-TTCCEEEEEECC-------------
T ss_pred cCCCeEEEEehhhccccCCCCCCeEeEecC-CCCEEEEEEEcCCCcceEEEEecCC
Confidence 777777777654333222 121 23456665554 3345566666554
No 355
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=65.79 E-value=73 Score=28.29 Aligned_cols=53 Identities=11% Similarity=0.122 Sum_probs=34.2
Q ss_pred CcEEEEEEcCCCC-eEEEEeCCCeEEEEeCCCCC---eeEEee---C------CCCcEEEEEECCC
Q psy15421 56 AKIYAMHWGSDSR-NLVSASQDGKLIVWDSYTTN---KVHAIP---L------RSSWVMTCAYAPS 108 (340)
Q Consensus 56 ~~v~~~~~s~~~~-~l~s~~~d~~i~iwd~~~~~---~~~~~~---~------~~~~i~~v~~~~~ 108 (340)
..=+.|+|.||+. .|+.+...|.|++++..... .+..++ . ...-.+.++|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 3457899999996 45556788999999753221 112221 1 1345788999996
No 356
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=65.40 E-value=26 Score=32.33 Aligned_cols=58 Identities=19% Similarity=0.265 Sum_probs=40.1
Q ss_pred eEEEEEcCCCcEEEEEeCC------------CcEEEEeCCCceeeeeeccC-CcceEEEEECCCCCEEEEe
Q psy15421 273 ITSVAFSRSGRLLLAGYDD------------FNCNVWDSMKTERAGILAGH-DNRVSCLGVTEDGMAVATG 330 (340)
Q Consensus 273 i~~~~~s~~~~~l~~g~~d------------~~i~iw~~~~~~~~~~~~~h-~~~i~~~~~s~d~~~l~s~ 330 (340)
.=.++|+|.|.++++-..+ ..+.+.+..+++....+.++ ..+++.++|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4678999999976664322 23445555566666666655 4679999999999877653
No 357
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=62.79 E-value=5.9 Score=39.90 Aligned_cols=38 Identities=37% Similarity=0.244 Sum_probs=31.7
Q ss_pred cEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEee
Q psy15421 57 KIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIP 94 (340)
Q Consensus 57 ~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 94 (340)
.+.+++..++..++++.+.|+++|+||+.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45566667788899999999999999999998877654
No 358
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=62.10 E-value=7.4 Score=39.23 Aligned_cols=36 Identities=19% Similarity=0.352 Sum_probs=30.7
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeeeEe
Q psy15421 187 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF 222 (340)
Q Consensus 187 v~~~~~~~~~~~~~sg~~dg~i~~wd~~~~~~~~~~ 222 (340)
+.+++..++..++++-+.|+++|+|++.+++++.+.
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 455667788889999999999999999999987764
No 359
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=61.10 E-value=47 Score=30.45 Aligned_cols=60 Identities=17% Similarity=0.235 Sum_probs=41.6
Q ss_pred cceEEEEEcCCCcEEEEEeC------------CCcEEEEeCCCceeeeeeccC-CcceEEEEECCCCCEEEEe
Q psy15421 271 CGITSVAFSRSGRLLLAGYD------------DFNCNVWDSMKTERAGILAGH-DNRVSCLGVTEDGMAVATG 330 (340)
Q Consensus 271 ~~i~~~~~s~~~~~l~~g~~------------d~~i~iw~~~~~~~~~~~~~h-~~~i~~~~~s~d~~~l~s~ 330 (340)
.....+.|+++|.+.++-.. +..+..++-.+++....+.+. ...++.++||||++.|..+
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 45788999999988774321 124666666566665555543 4578999999999877654
No 360
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=59.96 E-value=81 Score=26.88 Aligned_cols=63 Identities=8% Similarity=-0.032 Sum_probs=31.8
Q ss_pred ceEEEEEcCC-CcEEEEEeCCCcEEEEeCC--Cceeeee-ec-cC--------CcceEEEEECCC-CCEEEEeeCCC
Q psy15421 272 GITSVAFSRS-GRLLLAGYDDFNCNVWDSM--KTERAGI-LA-GH--------DNRVSCLGVTED-GMAVATGSWDS 334 (340)
Q Consensus 272 ~i~~~~~s~~-~~~l~~g~~d~~i~iw~~~--~~~~~~~-~~-~h--------~~~i~~~~~s~d-~~~l~s~s~D~ 334 (340)
.+.++.++|. ...|.++..++.+...+-. +.+.+.. +. .+ ...+.++.+.|+ ...|..+...+
T Consensus 178 ~i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 178 KMHSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp EEEEEEECTTCTTCEEEEEETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred ceeEEEECCCCCCEEEEEECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 4778999884 3444555444445444311 2222111 00 01 134888999885 34555565544
No 361
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=57.79 E-value=19 Score=34.04 Aligned_cols=37 Identities=19% Similarity=0.344 Sum_probs=29.6
Q ss_pred cEEEEEEcCCCCeEEEEeCCCeEEEEeCCCCCeeEEeeC
Q psy15421 57 KIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPL 95 (340)
Q Consensus 57 ~v~~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 95 (340)
.|.++.+ +..++++-+.|+++|+||+.+++.+.+...
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4565554 477999999999999999999987766554
No 362
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=54.41 E-value=15 Score=34.66 Aligned_cols=28 Identities=18% Similarity=0.345 Sum_probs=24.7
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeeeeEe
Q psy15421 195 DMRTFVSGACDASAKLWDIRDGSCKQTF 222 (340)
Q Consensus 195 ~~~~~~sg~~dg~i~~wd~~~~~~~~~~ 222 (340)
+..++++-+.|+++|+|++++++++.+.
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 4679999999999999999999987654
No 363
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=54.25 E-value=51 Score=30.41 Aligned_cols=58 Identities=16% Similarity=0.233 Sum_probs=39.6
Q ss_pred eEEEEEcCCCCEEEEEeCC------------CcEEEEECCCCeeeeEecCC-CCCeEEEEEecCCCEEEEE
Q psy15421 187 VMSLSLAPDMRTFVSGACD------------ASAKLWDIRDGSCKQTFPGH-ESDINAVTFFPNGWAFATG 244 (340)
Q Consensus 187 v~~~~~~~~~~~~~sg~~d------------g~i~~wd~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~ 244 (340)
.=.|+|+|.+.+++.-..+ ..+...+..+++..+.+.++ ..+++.++|+||++.|...
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3468999999877653221 24556666777766555444 4579999999998876654
No 364
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=52.79 E-value=92 Score=25.32 Aligned_cols=203 Identities=9% Similarity=0.023 Sum_probs=107.6
Q ss_pred EecCcc---CcEEEEEEcCCCCeEEEEeCCCeEEEEeCC---CCCeeEEeeCCCCcEEEEEECC-CCCEEEEEeCCCeEE
Q psy15421 50 TLRGHL---AKIYAMHWGSDSRNLVSASQDGKLIVWDSY---TTNKVHAIPLRSSWVMTCAYAP-SGSFVACGGLDNICS 122 (340)
Q Consensus 50 ~~~~h~---~~v~~~~~s~~~~~l~s~~~d~~i~iwd~~---~~~~~~~~~~~~~~i~~v~~~~-~~~~l~~~~~d~~v~ 122 (340)
..+||. +.+..+.-......|+--+++|.++--.++ .......+. ....|..+.... +..+++..+.+|.++
T Consensus 15 ~~~g~~~~gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~~G~iK 93 (276)
T 3no0_A 15 PVEELPLEKAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATKKGYVK 93 (276)
T ss_dssp EGGGCCSSCCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEETTSEEE
T ss_pred eccCCCCCCCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeCCCEEE
Confidence 445663 456655555555566667788877754332 111110122 234555554322 567899999999999
Q ss_pred EEEccCCC--CceEEEEeecCCCcceEEEEE-cCCCeEEEEeCCCeEEEEECCC----C-----ceEEEEecCCCCeEEE
Q psy15421 123 IYSLKTRE--GNVRVSRELPGHTGYLSCCRF-LDDNQIVTSSGDMSCALWDIET----G-----QQCASFIGHTGDVMSL 190 (340)
Q Consensus 123 i~~~~~~~--~~~~~~~~~~~~~~~v~~~~~-~~~~~l~~~~~d~~v~iwd~~~----~-----~~~~~~~~~~~~v~~~ 190 (340)
...+..-. ........+.. ...+..+.. .....++..+..|.+..+.... + .....+. ....+..+
T Consensus 94 r~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~ 171 (276)
T 3no0_A 94 KIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE-KNDETSGL 171 (276)
T ss_dssp EEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEE
T ss_pred EEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC-CCCEEEEE
Confidence 88875431 00011111222 223333333 3345688888889887776532 1 1111111 23456666
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCCC-------eeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEE--EeCc
Q psy15421 191 SLAPDMRTFVSGACDASAKLWDIRDG-------SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRL--FDIR 256 (340)
Q Consensus 191 ~~~~~~~~~~sg~~dg~i~~wd~~~~-------~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~i--wd~~ 256 (340)
...+++..++..+..|.++...+..- +-+..+ ...+.+-.+....+...++..+.+|.+.. ++..
T Consensus 172 ~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 172 RIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp EEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred EEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 66666678888899999998876431 112222 12334444333333345666666677666 6543
No 365
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=52.23 E-value=76 Score=29.15 Aligned_cols=60 Identities=13% Similarity=0.204 Sum_probs=41.5
Q ss_pred CeEEEEEcCCCCEEEEEeC------------CCcEEEEECCCCeeeeEecCC-CCCeEEEEEecCCCEEEEEe
Q psy15421 186 DVMSLSLAPDMRTFVSGAC------------DASAKLWDIRDGSCKQTFPGH-ESDINAVTFFPNGWAFATGS 245 (340)
Q Consensus 186 ~v~~~~~~~~~~~~~sg~~------------dg~i~~wd~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~s 245 (340)
....|.|.+++.+.++... ...|..++..+++....+.+. ...++.++|+||++.|...-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 4668999999988773211 125666777777766555433 35689999999998776653
No 366
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=43.43 E-value=1.4e+02 Score=24.60 Aligned_cols=130 Identities=11% Similarity=0.017 Sum_probs=68.1
Q ss_pred CCeEEEEe----CCCeEEEEECCCCceEEEEecCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeeeeEecCCCCC
Q psy15421 154 DNQIVTSS----GDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGA-CDASAKLWDIRDGSCKQTFPGHESD 228 (340)
Q Consensus 154 ~~~l~~~~----~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~sg~-~dg~i~~wd~~~~~~~~~~~~h~~~ 228 (340)
++.|+-.. .+..|...++.. .....+..+.. .+++|+++.|+-.+ ...+|..-++..+.....+.+ .
T Consensus 115 g~~Iy~~~~~~~~~~~Iy~~~~dG-s~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~---~ 186 (302)
T 3s25_A 115 GNYIYYLHYDTQTATSLYRIRIDG-EEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC---N 186 (302)
T ss_dssp TTEEEEEEESSSSCEEEEEEETTS-CCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS---C
T ss_pred CCEEEEEeecCCCCceEEEEECCC-CCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC---C
Confidence 44554443 344566666653 33344444432 34677777766444 467888888876654444432 2
Q ss_pred eEEEEEecCCCEEEEEeCC--CcEEEEeCcCCcEEEEeecCCcccceEEEEEcCCCcEEEEEeC--CCcEEEEeC
Q psy15421 229 INAVTFFPNGWAFATGSDD--ATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYD--DFNCNVWDS 299 (340)
Q Consensus 229 v~~v~~~~~~~~l~s~s~d--~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~--d~~i~iw~~ 299 (340)
.. ..+.|++.+++=.... ..|..-++....... +... .+ ..|+|++.+|.-+.+ ...|..-++
T Consensus 187 ~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~-Lt~~----~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~ 253 (302)
T 3s25_A 187 CY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVV-LTEA----NI--EHYNVYGSLIFYQRGGDNPALCVVKN 253 (302)
T ss_dssp EE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEE-CSCS----CE--EEEEEETTEEEEEECSSSCEEEEEET
T ss_pred cc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEE-EeCC----Cc--ceEEECCCEEEEEECCCCcEEEEEEC
Confidence 22 3356887776654433 345555555443222 2111 12 247788887775532 345555554
No 367
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=41.07 E-value=1.5e+02 Score=24.48 Aligned_cols=194 Identities=9% Similarity=0.002 Sum_probs=104.1
Q ss_pred CCCCEEEEEeCCCeEEEEEccCCCC-----ceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEECC---CCc---
Q psy15421 107 PSGSFVACGGLDNICSIYSLKTREG-----NVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIE---TGQ--- 175 (340)
Q Consensus 107 ~~~~~l~~~~~d~~v~i~~~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd~~---~~~--- 175 (340)
++..++++.+.+|.++-..+..-.. .......+......+....-.....++..+..|.+.-.... ...
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 4566778888888888776643211 01111111222222222222344567777788876655542 211
Q ss_pred ---eEEEE--ecCCCCeEEEEEcC---CCCEEEEEeCCCcEEEEECCC-------CeeeeEecCCCCCeEEEEEecCCCE
Q psy15421 176 ---QCASF--IGHTGDVMSLSLAP---DMRTFVSGACDASAKLWDIRD-------GSCKQTFPGHESDINAVTFFPNGWA 240 (340)
Q Consensus 176 ---~~~~~--~~~~~~v~~~~~~~---~~~~~~sg~~dg~i~~wd~~~-------~~~~~~~~~h~~~v~~v~~~~~~~~ 240 (340)
++... ......+.++...+ +...++..+..|.++...+.. |...-.+.. ...+-.+.....+..
T Consensus 86 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~ 164 (312)
T 1suu_A 86 KGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEK 164 (312)
T ss_dssp --CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCE
T ss_pred CCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCE
Confidence 00000 01223455554433 456788889999999887632 222222333 445655555555567
Q ss_pred EEEEeCCCcEEEEeCcCCcE-------EEEeecCCcccceEEEEEcCCCcEEEEEeCCCcEEEEeCCCc
Q psy15421 241 FATGSDDATCRLFDIRADQE-------LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT 302 (340)
Q Consensus 241 l~s~s~d~~i~iwd~~~~~~-------~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d~~i~iw~~~~~ 302 (340)
++..+.+|.+..+....-.. +..+... ....|..+..-+++..+++.+.+|..+.......
T Consensus 165 i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~ 232 (312)
T 1suu_A 165 VICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVKENPYLLIVSENGYGKRLNMSKI 232 (312)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEECTTCSEEEEEETTSEEEEEEGGGS
T ss_pred EEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEECCCCeEEEEECCCceEEEEHHHh
Confidence 88899999999888653111 1111111 1223555555455667888899999988886543
No 368
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=37.85 E-value=1.8e+02 Score=24.28 Aligned_cols=193 Identities=9% Similarity=0.008 Sum_probs=99.1
Q ss_pred CCCCEEEEEeCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCeEEEEeCCCeEEEEE---CCC------CceE
Q psy15421 107 PSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWD---IET------GQQC 177 (340)
Q Consensus 107 ~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~iwd---~~~------~~~~ 177 (340)
|+..++++.+.+|.|+--.+............+......+....-.....++..+..|.+.-.. +.. |.++
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i 82 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHI 82 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEG
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcCh
Confidence 4566778888888887765442100000000111111122222223455677777777755444 322 2211
Q ss_pred EEEe--cCCCCeEEEEEcCC---CCEEEEEeCCCcEEEEECCC--------CeeeeEecCCCCCeEEEEEecCCCEEEEE
Q psy15421 178 ASFI--GHTGDVMSLSLAPD---MRTFVSGACDASAKLWDIRD--------GSCKQTFPGHESDINAVTFFPNGWAFATG 244 (340)
Q Consensus 178 ~~~~--~~~~~v~~~~~~~~---~~~~~sg~~dg~i~~wd~~~--------~~~~~~~~~h~~~v~~v~~~~~~~~l~s~ 244 (340)
..+. .....|.++...++ ..+++..+.+|.++--.+.. +.....+... ..+-.+........++..
T Consensus 83 ~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~ 161 (323)
T 1wp5_A 83 ANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFLV 161 (323)
T ss_dssp GGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEE
T ss_pred hhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEE
Confidence 1111 12234655543332 56788899999999987642 1111123322 445555444455678888
Q ss_pred eCCCcEEEEeCcCCcE-------EEEeecCCcccceEEEEEcCCCc-EEEEEeCCCcEEEEeCCC
Q psy15421 245 SDDATCRLFDIRADQE-------LAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMK 301 (340)
Q Consensus 245 s~d~~i~iwd~~~~~~-------~~~~~~~~~~~~i~~~~~s~~~~-~l~~g~~d~~i~iw~~~~ 301 (340)
+.+|.+..+....-.. +..+... ....|.++..-+++. .+++.+..|..+..+...
T Consensus 162 T~~G~~irf~~~ev~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 162 THNGYALWFDESEVSIVGVRAAGVKGMNLK-EGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp ETTSEEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred eCCCcEEEEEHHHCcccCCCCcCEEEEEeC-CCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 8899988887643111 1111111 112345554433444 788888888888777543
No 369
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=33.69 E-value=2e+02 Score=23.72 Aligned_cols=191 Identities=9% Similarity=0.025 Sum_probs=104.3
Q ss_pred CCCCeEEEEeCCCeEEEEeCCCCCe-------eEEeeCC-CCcEEEEEECCCCCEEEEEeCCCeEEEEEccCC-CCceE-
Q psy15421 65 SDSRNLVSASQDGKLIVWDSYTTNK-------VHAIPLR-SSWVMTCAYAPSGSFVACGGLDNICSIYSLKTR-EGNVR- 134 (340)
Q Consensus 65 ~~~~~l~s~~~d~~i~iwd~~~~~~-------~~~~~~~-~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~~-~~~~~- 134 (340)
++.+.+++.+.+|.|+--...+.+. +..+... .+.+..+........++..+..|.+.-.....- .....
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 4566788899999999776543321 1122212 233444433444556666777777655554310 00000
Q ss_pred ---E---EEeecCCCcceEEEEEc---CCCeEEEEeCCCeEEEEECCCC-------ceEEEEecCCCCeEEEEEcCCCCE
Q psy15421 135 ---V---SRELPGHTGYLSCCRFL---DDNQIVTSSGDMSCALWDIETG-------QQCASFIGHTGDVMSLSLAPDMRT 198 (340)
Q Consensus 135 ---~---~~~~~~~~~~v~~~~~~---~~~~l~~~~~d~~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~ 198 (340)
. ...+......+..+... ++..++..+..|.++...+..- .....+.. .+.+..+....+...
T Consensus 86 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~ 164 (312)
T 1suu_A 86 KGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEK 164 (312)
T ss_dssp --CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCE
T ss_pred CCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCE
Confidence 0 00111112222222222 3456888899999998877432 11222222 456666666655667
Q ss_pred EEEEeCCCcEEEEECCCC---------eeeeEecCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCcC
Q psy15421 199 FVSGACDASAKLWDIRDG---------SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA 257 (340)
Q Consensus 199 ~~sg~~dg~i~~wd~~~~---------~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 257 (340)
++..+.+|.+..+....- ...-.+.. ...|.++..-+++..+++.+..|..+...+..
T Consensus 165 i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 165 VICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 888899999998876431 11112222 34566665555566788999999999988753
No 370
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=24.11 E-value=65 Score=14.95 Aligned_cols=21 Identities=38% Similarity=0.532 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q psy15421 4 LDSLRQEAETLKNAIRDARKA 24 (340)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~ 24 (340)
-|++-+|++.++..++..++.
T Consensus 3 adelykeledlqerlrklrkk 23 (27)
T 3twe_A 3 ADELYKELEDLQERLRKLRKK 23 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 345566666666666666553
No 371
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=23.97 E-value=2.6e+02 Score=25.35 Aligned_cols=68 Identities=15% Similarity=0.067 Sum_probs=41.7
Q ss_pred eEEEEEecCC--CEEEEEeCCCcEEEEeCcCCc----EEEEeecCCcccceE-EEEEcCCCcEEEEEeCCCcEEE
Q psy15421 229 INAVTFFPNG--WAFATGSDDATCRLFDIRADQ----ELAMYSHDNIICGIT-SVAFSRSGRLLLAGYDDFNCNV 296 (340)
Q Consensus 229 v~~v~~~~~~--~~l~s~s~d~~i~iwd~~~~~----~~~~~~~~~~~~~i~-~~~~s~~~~~l~~g~~d~~i~i 296 (340)
.++|+....+ ..+..|..+|.|.-..+.... ....+.......+|. .+.++++..+|.+++.++.+++
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 4556555433 357789999998655443221 122222211123564 7899999999999998876655
No 372
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=23.94 E-value=2.9e+02 Score=22.31 Aligned_cols=157 Identities=10% Similarity=-0.004 Sum_probs=84.5
Q ss_pred cCcEEEEEEcC-CCCeEEEEeCCCeEEEEeCCCCC----eeEEeeCC-CCcEEEEEECCCCCEEEEEeCCCeEEEEEccC
Q psy15421 55 LAKIYAMHWGS-DSRNLVSASQDGKLIVWDSYTTN----KVHAIPLR-SSWVMTCAYAPSGSFVACGGLDNICSIYSLKT 128 (340)
Q Consensus 55 ~~~v~~~~~s~-~~~~l~s~~~d~~i~iwd~~~~~----~~~~~~~~-~~~i~~v~~~~~~~~l~~~~~d~~v~i~~~~~ 128 (340)
.+.|..+-... +...++..+.+|.++-....+-. -+..++.. .+.+..+........++..+..|.+..+....
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~e 146 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVRE 146 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGG
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhh
Confidence 45566654421 46789999999999998765431 11222222 23455555555566788888888877776532
Q ss_pred ----CC-CceEEEEeecCCCcceEEE-EEcCCCeEEEEeCCCeEEEEECCCC-------ceEEEEecCCCCeEEEEEcCC
Q psy15421 129 ----RE-GNVRVSRELPGHTGYLSCC-RFLDDNQIVTSSGDMSCALWDIETG-------QQCASFIGHTGDVMSLSLAPD 195 (340)
Q Consensus 129 ----~~-~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~ 195 (340)
+. ........+... ..+..+ ...++..++..+..|.++...+..- +-+..+ .-.+.+..+....+
T Consensus 147 ip~~gR~a~Gv~~i~L~~~-d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~ 224 (276)
T 3no0_A 147 VPPSTPGARGVQGIKLEKN-DETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKE 224 (276)
T ss_dssp SCBCCTTCCCEECCCCCTT-CCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESS
T ss_pred CCCcCCCCCCEEEEccCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCC
Confidence 11 111111223222 333333 3344557888889999888876431 112222 22334444433333
Q ss_pred CCEEEEEeCCCcEEE--EEC
Q psy15421 196 MRTFVSGACDASAKL--WDI 213 (340)
Q Consensus 196 ~~~~~sg~~dg~i~~--wd~ 213 (340)
...++..+.+|.+.. ++.
T Consensus 225 ~~~i~~~t~~G~~ir~~~~~ 244 (276)
T 3no0_A 225 EVELLITTKNGKAFYDKINQ 244 (276)
T ss_dssp EEEEEEEETTSCEEEEEEEG
T ss_pred CCEEEEEcCCCeEEEeeeCH
Confidence 344555566666666 654
No 373
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=23.11 E-value=4.8e+02 Score=24.58 Aligned_cols=267 Identities=11% Similarity=0.044 Sum_probs=0.0
Q ss_pred EEcCCCCeEEEE-----eCCCeEEEEeCCCCCeeEEeeCCCCcE-------------EEEEECCCCCEEEEE--------
Q psy15421 62 HWGSDSRNLVSA-----SQDGKLIVWDSYTTNKVHAIPLRSSWV-------------MTCAYAPSGSFVACG-------- 115 (340)
Q Consensus 62 ~~s~~~~~l~s~-----~~d~~i~iwd~~~~~~~~~~~~~~~~i-------------~~v~~~~~~~~l~~~-------- 115 (340)
+++|++++++-+ +.-..++++|+.+++.+ ..... ..++|..++.++++.
T Consensus 136 ~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~-----~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~ 210 (711)
T 4hvt_A 136 NCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFV-----KNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEIT 210 (711)
T ss_dssp ECSSSTTEEEEEEEETTCSEEEEEEEETTTTEEC-----TTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBC
T ss_pred ecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcC-----CCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcC
Q ss_pred --eCCCeEEEEEccCCCCceEEEEeecCCCcceEEEEEcCCCe-----EEEEeCCCe-EEEEECCCC---ceEEEEecCC
Q psy15421 116 --GLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-----IVTSSGDMS-CALWDIETG---QQCASFIGHT 184 (340)
Q Consensus 116 --~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----l~~~~~d~~-v~iwd~~~~---~~~~~~~~~~ 184 (340)
+....++.|.+.+....-.....-+...-.+......+++. +++.+.+.. -.+|-+... .....+....
T Consensus 211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 290 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPS 290 (711)
T ss_dssp TTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCT
T ss_pred cCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCC
Q ss_pred CCeEEEEEcCCCCEEE----------EEeCCCcEEEEECCC---------CeeeeEecCCCCCeEEEEEecCCCEEEEEe
Q psy15421 185 GDVMSLSLAPDMRTFV----------SGACDASAKLWDIRD---------GSCKQTFPGHESDINAVTFFPNGWAFATGS 245 (340)
Q Consensus 185 ~~v~~~~~~~~~~~~~----------sg~~dg~i~~wd~~~---------~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s 245 (340)
... +..++++.+++ .....+.|...|+.+ .-.....+.....+..+.+.++ ..+++..
T Consensus 291 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~ 367 (711)
T 4hvt_A 291 DAT--LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATY 367 (711)
T ss_dssp TCE--EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEE
T ss_pred cce--EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEE
Q ss_pred CCC--cEEEEeCcCCc-EEEEeecCCcccceEEEEEcCCCcEEEEEeCC----CcEEEEeCCCceeeeeeccCCcceEEE
Q psy15421 246 DDA--TCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDD----FNCNVWDSMKTERAGILAGHDNRVSCL 318 (340)
Q Consensus 246 ~d~--~i~iwd~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d----~~i~iw~~~~~~~~~~~~~h~~~i~~~ 318 (340)
.++ .+.++|..++. .............+....+++++..++..... ..+..++.. .....+..........
T Consensus 368 ~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~--~~~~~l~~~~~~~~~~ 445 (711)
T 4hvt_A 368 DNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT--HELKIIRKALYSFDSE 445 (711)
T ss_dssp ETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT--SCEEEEECCSSCCCGG
T ss_pred ECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC--CcEEEEecCCcccCcc
Q ss_pred EECCCCCEEEEeeCCCcEEec
Q psy15421 319 GVTEDGMAVATGSWDSFLRIW 339 (340)
Q Consensus 319 ~~s~d~~~l~s~s~D~~i~iW 339 (340)
.+ .-....+.+..+..|..|
T Consensus 446 ~~-~~e~v~~~s~DG~~i~~~ 465 (711)
T 4hvt_A 446 NY-VLEQKEATSFDGVKIPYF 465 (711)
T ss_dssp GE-EEEEEEEECTTSCEEEEE
T ss_pred cC-eeEEEEEECCCCeEEEEE
No 374
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=22.25 E-value=3.5e+02 Score=22.74 Aligned_cols=133 Identities=6% Similarity=-0.084 Sum_probs=61.8
Q ss_pred CeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCeeeeEecC-C-C---CCeEEEEEecC--CCEEEEEe----------CC
Q psy15421 186 DVMSLSLAPD-MRTFVSGACDASAKLWDIRDGSCKQTFPG-H-E---SDINAVTFFPN--GWAFATGS----------DD 247 (340)
Q Consensus 186 ~v~~~~~~~~-~~~~~sg~~dg~i~~wd~~~~~~~~~~~~-h-~---~~v~~v~~~~~--~~~l~s~s----------~d 247 (340)
.+.++.++|. ...++.+...+ |...+- .++....+.. . . ..+.++.++|. +..++... .+
T Consensus 233 ~~~~i~~~~~~~~~l~vg~~~g-l~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~ 310 (394)
T 3b7f_A 233 DPHCVVQHPAAPDILYQQNHCG-IYRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPG 310 (394)
T ss_dssp CEEEEEECSSSTTEEEEEETTE-EEEEET-TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCC
T ss_pred ceeEEEECCCCCCEEEEEcCCe-EEEeCC-CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCC
Confidence 4788999886 35666666554 433332 2322222211 1 1 23567888763 33444321 12
Q ss_pred CcEEEEeCcC-CcEEEEeec--CC--cccc--eEEEEEcCCC-cEEEEEeCCCcEEEEeCCCceeeeeeccCCcceEEEE
Q psy15421 248 ATCRLFDIRA-DQELAMYSH--DN--IICG--ITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLG 319 (340)
Q Consensus 248 ~~i~iwd~~~-~~~~~~~~~--~~--~~~~--i~~~~~s~~~-~~l~~g~~d~~i~iw~~~~~~~~~~~~~h~~~i~~~~ 319 (340)
+...+|.... ++.-..+.. .. .... ...++++|.. ..|..++.++.+..-+ ..++.-..+..+.-.+.+|+
T Consensus 311 ~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S~-D~G~tW~~~~~~lp~~~~v~ 389 (394)
T 3b7f_A 311 GKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWASA-DEGEHWQCIASHLPHIYAVQ 389 (394)
T ss_dssp SSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEES-STTSBCEEEECSCSCEEEEE
T ss_pred CceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEEC-CCCCCceEcccCCCCeeEEE
Confidence 3344554332 222221111 10 0000 1357888753 4466676666655433 23333344444555677777
Q ss_pred EC
Q psy15421 320 VT 321 (340)
Q Consensus 320 ~s 321 (340)
|-
T Consensus 390 ~~ 391 (394)
T 3b7f_A 390 SA 391 (394)
T ss_dssp EE
T ss_pred Ee
Confidence 63
Done!