RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15421
(340 letters)
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 240 bits (611), Expect = 7e-78
Identities = 290/340 (85%), Positives = 315/340 (92%)
Query: 1 MNELDSLRQEAETLKNAIRDARKAACDTSLVTATGNMEPIGRIQMRTRRTLRGHLAKIYA 60
M+ELD LRQEAE LKN IRDARKA D +L T N++P+GRIQMRTRRTLRGHLAKIYA
Sbjct: 1 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA 60
Query: 61 MHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNI 120
MHWG+DSR LVSASQDGKLI+WDSYTTNKVHAIPLRSSWVMTCAYAPSG++VACGGLDNI
Sbjct: 61 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI 120
Query: 121 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASF 180
CSIY+LKTREGNVRVSREL GHTGYLSCCRFLDDNQIVTSSGD +CALWDIETGQQ +F
Sbjct: 121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF 180
Query: 181 IGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 240
GHTGDVMSLSLAPD R FVSGACDASAKLWD+R+G C+QTF GHESDINA+ FFPNG A
Sbjct: 181 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA 240
Query: 241 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 300
FATGSDDATCRLFD+RADQEL YSHDNIICGITSV+FS+SGRLLLAGYDDFNCNVWD++
Sbjct: 241 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300
Query: 301 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340
K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 301 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 139 bits (350), Expect = 2e-39
Identities = 66/313 (21%), Positives = 119/313 (38%), Gaps = 27/313 (8%)
Query: 48 RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAP 107
+ L GH + + + + +VSAS+D + VWD T + + + V ++
Sbjct: 10 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 69
Query: 108 SGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCA 167
SG +A + L +G + S + + IV++S D +
Sbjct: 70 SGKLLAS---CSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIK 126
Query: 168 LWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHES 227
+W+++TG +F GH V + D S + D + ++W + CK H
Sbjct: 127 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRH 186
Query: 228 DINAVTF--------------------FPNGWAFATGSDDATCRLFDIRADQELAMYS-H 266
+ +++ G +GS D T +++D+ L H
Sbjct: 187 VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 246
Query: 267 DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMA 326
DN + V F G+ +L+ DD VWD L H++ V+ L +
Sbjct: 247 DN---WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY 303
Query: 327 VATGSWDSFLRIW 339
V TGS D +++W
Sbjct: 304 VVTGSVDQTVKVW 316
Score = 108 bits (270), Expect = 7e-28
Identities = 47/232 (20%), Positives = 92/232 (39%), Gaps = 25/232 (10%)
Query: 44 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTC 103
RT+ GH + ++ + ++VSAS+D + +W+ T V WV
Sbjct: 90 GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 149
Query: 104 AYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ------- 156
G+ +A D ++ + T+E EL H + C + ++
Sbjct: 150 RPNQDGTLIASCSNDQTVRVWVVATKE----CKAELREHRHVVECISWAPESSYSSISEA 205
Query: 157 --------------IVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSG 202
+++ S D + +WD+ TG + +GH V + + +S
Sbjct: 206 TGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSC 265
Query: 203 ACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFD 254
A D + ++WD ++ C +T HE + ++ F TGS D T ++++
Sbjct: 266 ADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 105 bits (261), Expect = 1e-26
Identities = 58/272 (21%), Positives = 110/272 (40%), Gaps = 29/272 (10%)
Query: 49 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
RTL+GH + + + + L S S D + +WD + + V + + P+
Sbjct: 53 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPN 112
Query: 109 GSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFL-DDNQIVTSSGDMSCA 167
G + D ++ ++T + GH ++ R D I + S D +
Sbjct: 113 GDHIVSASRDKTIKMWEVQTG----YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 168
Query: 168 LWDIETGQQCASFIGHTGDVMSLSLAPDM--------------------RTFVSGACDAS 207
+W + T + A H V +S AP+ +SG+ D +
Sbjct: 169 VWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 228
Query: 208 AKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS-H 266
K+WD+ G C T GH++ + V F G + +DD T R++D + + + + H
Sbjct: 229 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 288
Query: 267 DNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 298
++ +TS+ F ++ ++ G D VW+
Sbjct: 289 EH---FVTSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 76.3 bits (186), Expect = 2e-16
Identities = 50/223 (22%), Positives = 95/223 (42%), Gaps = 23/223 (10%)
Query: 139 LPGHTGYLSCCRFL-DDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMR 197
L GH ++ F + +V++S D + +WD ETG + GHT V +S +
Sbjct: 13 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 72
Query: 198 TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA 257
S + D + KLWD + C +T GH+ ++++V+ PNG + S D T ++++++
Sbjct: 73 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT 132
Query: 258 DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSC 317
+ ++ V ++ G L+ + +D VW E L H + V C
Sbjct: 133 GYCVKTFTGHREWV--RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVEC 190
Query: 318 LGVTED--------------------GMAVATGSWDSFLRIWN 340
+ + G + +GS D +++W+
Sbjct: 191 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 233
Score = 75.2 bits (183), Expect = 6e-16
Identities = 38/170 (22%), Positives = 69/170 (40%), Gaps = 2/170 (1%)
Query: 171 IETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDIN 230
I + + GH V + P VS + DA+ K+WD G ++T GH +
Sbjct: 4 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQ 63
Query: 231 AVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYD 290
++F +G A+ S D T +L+D + + + + S +G +++
Sbjct: 64 DISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVS--IMPNGDHIVSASR 121
Query: 291 DFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340
D +W+ GH V + +DG +A+ S D +R+W
Sbjct: 122 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 171
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 112 bits (279), Expect = 1e-28
Identities = 67/346 (19%), Positives = 127/346 (36%), Gaps = 46/346 (13%)
Query: 36 NMEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAI-- 93
N I + ++L H + + + + +D L + + V+ + V +
Sbjct: 44 NPALPREIDVELHKSL-DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSD 101
Query: 94 ----------------PLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSR 137
P ++ + ++P G F+A G D + I+ E V
Sbjct: 102 DSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIW---DIENRKIVMI 158
Query: 138 ELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMR 197
S F +++V+ SGD + +WD+ TGQ + G D +
Sbjct: 159 LQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGK 218
Query: 198 TFVSGACDASAKLWDIRDGSCKQT-------FPGHESDINAVTFFPNGWAFATGSDDATC 250
+G+ D + ++WD G + GH+ + +V F +G + +GS D +
Sbjct: 219 YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSV 278
Query: 251 RLFDIRADQELAMY----------SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 300
+L++++ + ++ + SVA +++ +L+G D WD
Sbjct: 279 KLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKK 338
Query: 301 KTERAGILAGHDNRVSCLGVTE------DGMAVATGSWDSFLRIWN 340
+L GH N V + V + ATGS D RIW
Sbjct: 339 SGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384
Score = 91.8 bits (226), Expect = 2e-21
Identities = 49/220 (22%), Positives = 85/220 (38%), Gaps = 22/220 (10%)
Query: 59 YAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLD 118
Y++ + LVS S D + +WD T + + G ++A G LD
Sbjct: 167 YSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLD 226
Query: 119 NICSIYSLKTREGNVRVSRE---LPGHTGYLSCCRFL-DDNQIVTSSGDMSCALWDIETG 174
++ +T R+ E GH + F D +V+ S D S LW+++
Sbjct: 227 RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 286
Query: 175 QQ------------CASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF 222
++IGH V+S++ + +SG+ D WD + G+
Sbjct: 287 NNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML 346
Query: 223 PGHESDINAV------TFFPNGWAFATGSDDATCRLFDIR 256
GH + + +V + P FATGS D R++ +
Sbjct: 347 QGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386
Score = 48.3 bits (113), Expect = 6e-07
Identities = 20/105 (19%), Positives = 39/105 (37%), Gaps = 6/105 (5%)
Query: 29 SLVTATGNMEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTN 88
+L A + T GH + ++ + ++S S+D ++ WD + N
Sbjct: 282 NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN 341
Query: 89 KVHAIPLRSSWVMTCAYA------PSGSFVACGGLDNICSIYSLK 127
+ + + V++ A A P + A G D I+ K
Sbjct: 342 PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 91.4 bits (225), Expect = 2e-21
Identities = 63/341 (18%), Positives = 112/341 (32%), Gaps = 48/341 (14%)
Query: 42 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVM 101
R ++++ + L+GH + +VS S D L VW + T + + + V
Sbjct: 3 RGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVW 61
Query: 102 TCAYAPSGSFVACGGLDNICSIYS-------LKTREGNVRVSRELPGHTGYLSCCRFLD- 153
+ + L VR S L
Sbjct: 62 SSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRV 121
Query: 154 -------------------------DNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVM 188
++V+ + D +WD ET + GHT V
Sbjct: 122 WDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 181
Query: 189 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA 248
SL D VSG+ D S ++WD+ G+C T GH+S + + N +G+ D+
Sbjct: 182 SLQ--FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADS 237
Query: 249 TCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD-----SMKTE 303
T +++DI+ Q L N + + ++ DD +WD ++
Sbjct: 238 TVKIWDIKTGQCLQTLQGPNKHQSAVTC-LQFNKNFVITSSDDGTVKLWDLKTGEFIRNL 296
Query: 304 RAGILAGHDNRVSCLGVTEDGMAVATGSWD----SFLRIWN 340
G V + + + A GS + + L + +
Sbjct: 297 VTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 337
Score = 76.8 bits (187), Expect = 2e-16
Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 10/212 (4%)
Query: 129 REGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVM 188
R G ++ + L GH ++ C N+IV+ S D + +W TG+ + +GHTG V
Sbjct: 2 RRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVW 61
Query: 189 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA 248
S + ++ S + + + + +GS DA
Sbjct: 62 SSQMRDNIIISGSTDRTL----KVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDA 117
Query: 249 TCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL 308
T R++DI Q L + GR +++G DF VWD L
Sbjct: 118 TLRVWDIETGQCLHVLMG----HVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 173
Query: 309 AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340
GH NRV + DG+ V +GS D+ +R+W+
Sbjct: 174 QGHTNRVYS--LQFDGIHVVSGSLDTSIRVWD 203
Score = 44.8 bits (104), Expect = 7e-06
Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 9/131 (6%)
Query: 211 WDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA-MYSHDNI 269
W + + GH+ + G +GSDD T +++ + L + H
Sbjct: 1 WRRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG- 58
Query: 270 ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVAT 329
G+ S + + + + I + + + + V +
Sbjct: 59 --GVWSSQMRDN----IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVS 112
Query: 330 GSWDSFLRIWN 340
GS D+ LR+W+
Sbjct: 113 GSRDATLRVWD 123
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 87.6 bits (215), Expect = 3e-20
Identities = 41/300 (13%), Positives = 89/300 (29%), Gaps = 13/300 (4%)
Query: 46 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLR-----SSWV 100
R TL H + A+ + +R++ + G + VWD + +++
Sbjct: 43 RQINTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYI 100
Query: 101 MTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTS 160
+C P G + GG + SI+ L ++ Y
Sbjct: 101 RSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCC 160
Query: 161 SGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ 220
S G + + G + +
Sbjct: 161 SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD--NTVRSWDLREGRQL 218
Query: 221 TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR 280
S I ++ + P G A G + + + + + ++ H++ + S+ F+
Sbjct: 219 QQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVL---SLKFAY 275
Query: 281 SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340
G+ ++ D N W + + + V ++ D + TGS D ++
Sbjct: 276 CGKWFVSTGKDNLLNAWR-TPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334
Score = 65.6 bits (158), Expect = 1e-12
Identities = 18/115 (15%), Positives = 33/115 (28%), Gaps = 1/115 (0%)
Query: 141 GHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFV 200
T + + + + + S H V+SL A + FV
Sbjct: 222 DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFV 281
Query: 201 SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI 255
S D W G+ S + + + TGS D ++++
Sbjct: 282 STGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335
Score = 43.3 bits (100), Expect = 2e-05
Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 6/74 (8%)
Query: 99 WVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFL-DDNQI 157
V++ +A G + G DN+ + + S + + C DD I
Sbjct: 267 CVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA-----SIFQSKESSSVLSCDISVDDKYI 321
Query: 158 VTSSGDMSCALWDI 171
VT SGD ++++
Sbjct: 322 VTGSGDKKATVYEV 335
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 85.3 bits (209), Expect = 1e-19
Identities = 57/310 (18%), Positives = 98/310 (31%), Gaps = 27/310 (8%)
Query: 41 GRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWV 100
GR ++ +Y + + D + +VS +D + +WD T + + V
Sbjct: 1 GRHSLQRIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSV 58
Query: 101 MTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTS 160
+ Y + + H ++ +VT
Sbjct: 59 LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLI-------HHCEAVLHLRFNNGMMVTC 111
Query: 161 SGDMSCALWDIETGQQ-CASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK 219
S D S A+WD+ + + + D + VS + D + K+W+
Sbjct: 112 SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFV 171
Query: 220 QTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS 279
+T GH+ I +GS D T RL+DI L + +
Sbjct: 172 RTLNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 229
Query: 280 RSGRLLLAGYDDFNCNVWD---------SMKTERAGILAGHDNRVSCLGVTEDGMAVATG 330
R +++G D VWD T L H RV L D + +
Sbjct: 230 R----IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSS 283
Query: 331 SWDSFLRIWN 340
S D + IW+
Sbjct: 284 SHDDTILIWD 293
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 80.3 bits (196), Expect = 2e-17
Identities = 47/322 (14%), Positives = 88/322 (27%), Gaps = 29/322 (9%)
Query: 44 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKV--HAIPLRSSWVM 101
+ L+ H ++ + W DS +V+ D VW I +
Sbjct: 40 KWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAAR 99
Query: 102 TCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSS 161
+AP+ A G + SI + + + ++ ++ +
Sbjct: 100 CVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG 159
Query: 162 GDM-SCALWDIETGQ------------------QCASFIGHTGDVMSLSLAPDMRTFVSG 202
C ++ + G V + + +
Sbjct: 160 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWV 219
Query: 203 ACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA 262
+ D++ L D T + AVTF A G D A +L+
Sbjct: 220 SHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLS 279
Query: 263 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTE 322
++ + + R D + S AG+ + H N VS + V
Sbjct: 280 FGGRLDVPKQSSQRGLTARERFQNL---DKKASSEGSAAAG-AGLDSLHKNSVSQISVLS 335
Query: 323 DG----MAVATGSWDSFLRIWN 340
G T D + IW+
Sbjct: 336 GGKAKCSQFCTTGMDGGMSIWD 357
Score = 64.5 bits (155), Expect = 4e-12
Identities = 40/311 (12%), Positives = 83/311 (26%), Gaps = 28/311 (9%)
Query: 54 HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLR--SSWVMTCAYAPSGSF 111
+ I W D + + ++ +++ V L+ + V +AP +
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65
Query: 112 VACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDI 171
+ G D +++ L + ++ + SG ++
Sbjct: 66 IVTCGTDRNAYVWT-LKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYF 124
Query: 172 ETGQQ----CASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS---------- 217
E V+SL P+ +G+CD +++
Sbjct: 125 EQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPW 184
Query: 218 --------CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNI 269
++ V F NG A S D+T L D +A + +
Sbjct: 185 GSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET- 243
Query: 270 ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVAT 329
+ +V F L+ AG+D ++ G +
Sbjct: 244 -LPLLAVTFITESSLVAAGHDC-FPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERF 301
Query: 330 GSWDSFLRIWN 340
+ D
Sbjct: 302 QNLDKKASSEG 312
Score = 59.5 bits (142), Expect = 1e-10
Identities = 30/222 (13%), Positives = 63/222 (28%), Gaps = 19/222 (8%)
Query: 58 IYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGG- 116
+ ++ W +S L + S D K ++ +Y + G
Sbjct: 144 VLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW 203
Query: 117 -----LDNICSIYSLKTREGNVRV--------SRELPGHTGYLSCCRFLDDNQIVTSSGD 163
S + + + V + L T L F+ ++ +V + D
Sbjct: 204 VHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHD 263
Query: 164 MSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP 223
L+ ++ SF G S D A +
Sbjct: 264 CFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEG-SAAAGAGLDS 322
Query: 224 GHESDINAVTFFPNG----WAFATGSDDATCRLFDIRADQEL 261
H++ ++ ++ G F T D ++D+R+ +
Sbjct: 323 LHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESA 364
Score = 37.9 bits (86), Expect = 0.001
Identities = 18/175 (10%), Positives = 46/175 (26%), Gaps = 43/175 (24%)
Query: 44 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTC 103
++ + + ++ + S D + + D+ V + + ++
Sbjct: 190 FGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAV 249
Query: 104 AYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELP----------------------- 140
+ S VA G +++ + G + L
Sbjct: 250 TFITESSLVAAGHDCFPV-LFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKA 308
Query: 141 --------------GHTGYLSCCRFLDD-----NQIVTSSGDMSCALWDIETGQQ 176
H +S L +Q T+ D ++WD+ + +
Sbjct: 309 SSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES 363
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 76.8 bits (187), Expect = 3e-16
Identities = 29/308 (9%), Positives = 66/308 (21%), Gaps = 25/308 (8%)
Query: 53 GHLAKIYAMHWGSDSRNLVSASQD-GKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSF 111
+I + G D++ G + Y T K V +G F
Sbjct: 40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKF 99
Query: 112 VACGGLDNICSIYSLK-------TREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDM 164
L+ R ++ F +
Sbjct: 100 AVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQ 159
Query: 165 SCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK----- 219
+ ++D+E + + + + D + + + D +
Sbjct: 160 AIHVYDMEGRKIF-AATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVS 218
Query: 220 --QTFPGHESDINAVTFFPNGWAFATGSDDAT-----CRLFDIRADQELAMYSHDNIICG 272
P N P G D ++ + ++ I
Sbjct: 219 KPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILI 278
Query: 273 ITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW 332
+ + +D + N ++ L ++ D V
Sbjct: 279 YSVPVHGEFAAYYQGAPEKGVLLKYDVKT----RKVTEVKNNLTDLRLSADRKTVMVRKD 334
Query: 333 DSFLRIWN 340
D + +
Sbjct: 335 DGKIYTFP 342
Score = 73.0 bits (177), Expect = 5e-15
Identities = 28/190 (14%), Positives = 53/190 (27%), Gaps = 15/190 (7%)
Query: 43 IQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYT-------TNKVHAIPL 95
++ R + YA + +DS+NL S D +K IPL
Sbjct: 166 MEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPL 225
Query: 96 RSSWVMTCAYAPSGSFVACGGL---DNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFL 152
P G D + G+ R+ L S
Sbjct: 226 IPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHG 285
Query: 153 DDNQ-IVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLW 211
+ + +D++T + ++ L L+ D +T + D +
Sbjct: 286 EFAAYYQGAPEKGVLLKYDVKTRKV----TEVKNNLTDLRLSADRKTVMVRKDDGKIYTF 341
Query: 212 DIRDGSCKQT 221
+ ++T
Sbjct: 342 PLEKPEDERT 351
Score = 65.3 bits (157), Expect = 2e-12
Identities = 13/225 (5%), Positives = 46/225 (20%), Gaps = 16/225 (7%)
Query: 49 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
+ + + V+D A +S A+
Sbjct: 131 TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATT-ENSHDYAPAFDAD 189
Query: 109 GSFVACGGLDNICSIYSLKTREGNVRVSRE---LPGHTGYLSCCRFLDDNQIVTSSGDMS 165
+ ++ + V + +P G + + + + +
Sbjct: 190 SKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDL 249
Query: 166 CALW--------DIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS 217
++ D + + +D++
Sbjct: 250 NDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK 309
Query: 218 CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA 262
++++ + + DD F + ++
Sbjct: 310 VT----EVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDER 350
Score = 64.1 bits (154), Expect = 4e-12
Identities = 27/274 (9%), Positives = 66/274 (24%), Gaps = 26/274 (9%)
Query: 46 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAY 105
+L ++AM + + V A+ +++ D T R + +
Sbjct: 76 GKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTI 135
Query: 106 APSGSFVACGGLDNICSIYSLKTREG------NVRVSRELPGHTGYLSCCRFLDDNQIVT 159
+ + F+A G + ++ ++ + D +
Sbjct: 136 SDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYY 195
Query: 160 SSGDMSCALWDIETGQQCA-------SFIGHTGDVMSLSLAPDMRTFVSGACDASAKLW- 211
S D G L P T +G D +
Sbjct: 196 LSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKR 255
Query: 212 ------DIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS 265
D D + + + +D++ + + +
Sbjct: 256 SSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKN 315
Query: 266 HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 299
+ +T + S + ++ DD +
Sbjct: 316 N------LTDLRLSADRKTVMVRKDDGKIYTFPL 343
Score = 33.7 bits (75), Expect = 0.027
Identities = 5/52 (9%), Positives = 16/52 (30%)
Query: 33 ATGNMEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDS 84
+ + R + + + +D + ++ DGK+ +
Sbjct: 292 QGAPEKGVLLKYDVKTRKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPL 343
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 70.6 bits (171), Expect = 3e-14
Identities = 30/323 (9%), Positives = 74/323 (22%), Gaps = 30/323 (9%)
Query: 45 MRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLR---SSWVM 101
M+ + + I + L+ S DG L V+ K + ++
Sbjct: 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL 60
Query: 102 TCAYAP-SGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTS 160
C + + + G + L ++ C D +
Sbjct: 61 CCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASW 120
Query: 161 SGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGAC------DASAKLWDIR 214
G + D + + + + + ++ + + +
Sbjct: 121 DGLIEV--IDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLP 178
Query: 215 DGSCKQT----FPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA-------- 262
+ +A S D + +
Sbjct: 179 LCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF 238
Query: 263 -----MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSC 317
N+ + S+ FS + L D + W+ ++ A N S
Sbjct: 239 RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSV 297
Query: 318 LGVTEDGMAVATGSWDSFLRIWN 340
+ + + + D +
Sbjct: 298 VKIACSDNILCLATSDDTFKTNA 320
Score = 51.4 bits (121), Expect = 5e-08
Identities = 22/210 (10%), Positives = 51/210 (24%), Gaps = 24/210 (11%)
Query: 82 WDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPG 141
D K + S + G ++ + L E + E
Sbjct: 133 GDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGL 192
Query: 142 HTGYLSCCRFLDDNQ-IVTSSGDMSCALWDIETG---------------QQCASFIGHTG 185
+ + SS D A+ + +
Sbjct: 193 KYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAY 252
Query: 186 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS 245
V S+ +P + + D W+++ + F + V + +
Sbjct: 253 PVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNE-DSVVKIACSDNILCLAT 311
Query: 246 DDATCRL-------FDIRADQELAMYSHDN 268
D T + ++ A ++ ++N
Sbjct: 312 SDDTFKTNAAIDQTIELNASSIYIIFDYEN 341
Score = 37.9 bits (86), Expect = 0.001
Identities = 11/76 (14%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
Query: 44 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTC 103
R + ++ + + L +A DG + W+ T K+ + +
Sbjct: 240 CHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA-KFNEDSVV 298
Query: 104 AYAPSGSFVACGGLDN 119
A S + + D+
Sbjct: 299 KIACSDNILCLATSDD 314
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 67.3 bits (162), Expect = 2e-13
Identities = 39/296 (13%), Positives = 80/296 (27%), Gaps = 7/296 (2%)
Query: 48 RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIP-LRSSWVMTCAYA 106
+ GH I A+ +D + L SA +G + WD T P + ++ +
Sbjct: 5 DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 64
Query: 107 PSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSC 166
G D++ + + + + + + D I ++
Sbjct: 65 SKGDLFTVSWDDHLKVVPAGGSGVDSSK--AVANKLSSQPLGLAVSADGDIAVAACYKHI 122
Query: 167 ALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHE 226
A++ + I + ++LS S +T
Sbjct: 123 AIYSHGKLTEV--PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPA 180
Query: 227 SDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLL 286
+ + AT + S + V++S L
Sbjct: 181 EITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLA 240
Query: 287 AGYDDFNCNVWD--SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340
G D + VW+ I H + + + + DS ++ WN
Sbjct: 241 TGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
Score = 48.4 bits (113), Expect = 4e-07
Identities = 17/86 (19%), Positives = 29/86 (33%), Gaps = 1/86 (1%)
Query: 216 GSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITS 275
GS Q GH I A++ +G + + +DI ++ + IT
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVH-ATMITG 60
Query: 276 VAFSRSGRLLLAGYDDFNCNVWDSMK 301
+ + G L +DD V
Sbjct: 61 IKTTSKGDLFTVSWDDHLKVVPAGGS 86
Score = 43.8 bits (101), Expect = 1e-05
Identities = 17/116 (14%), Positives = 36/116 (31%), Gaps = 2/116 (1%)
Query: 142 HTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVS 201
T S + ++ + S+ HT V +S +PD +
Sbjct: 182 ITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLAT 241
Query: 202 GACDASAKLWDIRDGSCKQ--TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI 255
G+ D S +W++ S H + N + D+ + +++
Sbjct: 242 GSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
Score = 41.5 bits (95), Expect = 7e-05
Identities = 12/90 (13%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 82 WDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPG 141
+++ ++ ++ V +++P +A G LDN ++++ + +
Sbjct: 209 ANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSD-HPIIIKGAH 267
Query: 142 HTGYLSCCRFLDDNQIVTSSGDMSCALWDI 171
++ +L++ IV++ D + W++
Sbjct: 268 AMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 66.4 bits (160), Expect = 6e-13
Identities = 33/310 (10%), Positives = 65/310 (20%), Gaps = 45/310 (14%)
Query: 70 LVSASQDGKLIVWDSYTTNKVHAIPLRS--SWVMTCAYAPSGSFV-ACGGLDNICSIYSL 126
+++ ++ KL+V D+ I + M AP G A L
Sbjct: 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63
Query: 127 KTRE-------------GNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIET 173
T E L L+ ++ +
Sbjct: 64 VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE 123
Query: 174 GQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD----- 228
+ L+ A D D + D G+ + P +
Sbjct: 124 TLSRRKAFEAPRQITMLAWARDGSKLYGLGRDL--HVMDPEAGTLVEDKPIQSWEAETYA 181
Query: 229 ------------------INAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNII 270
T + + D+ + +
Sbjct: 182 QPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDV 241
Query: 271 CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATG 330
++ R +D K + + + V+ DG V G
Sbjct: 242 FYFSTAVNPAKTRA---FGAYNVLESFDLEKNASIKRV-PLPHSYYSVNVSTDGSTVWLG 297
Query: 331 SWDSFLRIWN 340
L ++
Sbjct: 298 GALGDLAAYD 307
Score = 56.0 bits (133), Expect = 2e-09
Identities = 17/165 (10%), Positives = 42/165 (25%), Gaps = 2/165 (1%)
Query: 98 SWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQI 157
+ +G+ V + + + + V E G D +
Sbjct: 153 GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPA 212
Query: 158 VTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS 217
++ D+ETG+ + + +T + +D+ +
Sbjct: 213 DPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRA-FGAYNVLESFDLEKNA 271
Query: 218 CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA 262
+ P +V +G G +D ++
Sbjct: 272 SIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKG 315
Score = 49.4 bits (116), Expect = 2e-07
Identities = 31/296 (10%), Positives = 64/296 (21%), Gaps = 43/296 (14%)
Query: 50 TLRGHLAKIYAMHWGSDSRNL-VSASQDGKLIVWDSYT-----TNKVHAIPLRSSWVMTC 103
T+ R + ++ L+ D T + R +
Sbjct: 28 TIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGA 87
Query: 104 AYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPG-------HTGYLSCCRFLDDNQ 156
A +P G +A + + + V + ++ + D
Sbjct: 88 ALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGS 147
Query: 157 IVTSSGDMSCALWDIETGQQCASFIGH-----------------------TGDVMSLSLA 193
+ G + D E G +
Sbjct: 148 KLYGLG-RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTAR 206
Query: 194 PDMRTFVSGACDASAKLWDIRDGSCKQT-FPGHESDINAVTFFPNGWAFATGSDDATCRL 252
D+ A D+ G + + P
Sbjct: 207 KDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFG--AYNVLES 264
Query: 253 FDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL 308
FD+ + + + SV S G + G + +D+ E+ G +
Sbjct: 265 FDLEKNASIKRVPLPH---SYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQV 317
Score = 43.6 bits (101), Expect = 2e-05
Identities = 16/181 (8%), Positives = 38/181 (20%), Gaps = 5/181 (2%)
Query: 53 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFV 112
G + G+ + S + +
Sbjct: 153 GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPA 212
Query: 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIE 172
L+T E RE+ + + ++ +D+E
Sbjct: 213 DPTAYRTGLLTMDLETGE---MAMREVRIMDVFYFSTAVNPAKTRAFGAYNV-LESFDLE 268
Query: 173 TGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAV 232
+ S++++ D T G +D K + ++
Sbjct: 269 KNASIKR-VPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSL 327
Query: 233 T 233
Sbjct: 328 A 328
Score = 34.4 bits (77), Expect = 0.017
Identities = 15/96 (15%), Positives = 24/96 (25%), Gaps = 1/96 (1%)
Query: 59 YAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLD 118
+ + + L +D N + + GS V GG
Sbjct: 242 FYFSTAVNPAKTRAFGAYNVLESFD-LEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGAL 300
Query: 119 NICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD 154
+ Y +T E +V S F D
Sbjct: 301 GDLAAYDAETLEKKGQVDLPGNASMSLASVRLFTRD 336
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 65.8 bits (158), Expect = 7e-13
Identities = 34/293 (11%), Positives = 83/293 (28%), Gaps = 15/293 (5%)
Query: 49 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
+T+ GH I A+ L+S S DG+++ W S + ++ H S+ +++ + +
Sbjct: 7 KTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQDH-----SNLIVSLDNSKA 57
Query: 109 GSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCAL 168
+ + D + K G+ + + + +
Sbjct: 58 QEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTN----DDDLLILQSFTGDI 113
Query: 169 WDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD 228
S + + + +++ L V D K ++
Sbjct: 114 IKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPS 173
Query: 229 INAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAG 288
+ + A + + + + L+ G
Sbjct: 174 ETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATG 233
Query: 289 YDDFNCNVWD-SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340
D N ++ + L H + V+ L + + D+ ++ WN
Sbjct: 234 SLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWN 285
Score = 49.6 bits (116), Expect = 2e-07
Identities = 6/109 (5%), Positives = 30/109 (27%), Gaps = 2/109 (1%)
Query: 148 CCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDAS 207
+ + + + + + + +G+ D +
Sbjct: 179 AGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTN 238
Query: 208 AKLWDIRD-GSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI 255
++ ++ + H+ +N + + + DA + +++
Sbjct: 239 IFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNV 286
Score = 45.7 bits (106), Expect = 4e-06
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Query: 82 WDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPG 141
++ T+K++AI + + VA G LD IYS+K ++ L
Sbjct: 200 RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKA---LNA 256
Query: 142 HTGYLSCCRFLDDNQIVTSSGDMSCALWDI 171
H ++ + + +V+S D W++
Sbjct: 257 HKDGVNNLLWETPSTLVSSGADACIKRWNV 286
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 66.1 bits (159), Expect = 1e-12
Identities = 20/134 (14%), Positives = 41/134 (30%), Gaps = 1/134 (0%)
Query: 139 LPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRT 198
L GH + C +DN ++T + D ++D + GH G V +L A
Sbjct: 8 LRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGIL 67
Query: 199 FVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF-ATGSDDATCRLFDIRA 257
+ + + + TGS D T ++ +
Sbjct: 68 VSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPK 127
Query: 258 DQELAMYSHDNIIC 271
+ + + ++
Sbjct: 128 ESSVPDHGEEHDYP 141
Score = 65.7 bits (158), Expect = 1e-12
Identities = 47/351 (13%), Positives = 97/351 (27%), Gaps = 64/351 (18%)
Query: 48 RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAP 107
R TLRGH+ + + +++ + D + V+DS + + V YA
Sbjct: 5 RTTLRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH 63
Query: 108 SGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCA 167
G V+ + K +V + + IVT S D +
Sbjct: 64 GGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLD--IVEYKNIKYIVTGSRDNTLH 121
Query: 168 LWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVS---------------------GACDA 206
+W + + + FV G+ D
Sbjct: 122 VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDN 181
Query: 207 SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSH 266
+ +WD+ C GH I + + + S D T R++D+ + +
Sbjct: 182 TLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG 241
Query: 267 DNIICG-------------------------------------ITSVAFSRSGRLLLAGY 289
+ G F S +L++G
Sbjct: 242 HTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS 301
Query: 290 DDFNCNVWDSMKTER-AGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 339
++ N+++ + + +++ + + VA D +
Sbjct: 302 EN-QFNIYNLRSGKLVHANILKDADQIWSVNFKGKTL-VAAVEKDGQSFLE 350
Score = 40.3 bits (92), Expect = 2e-04
Identities = 15/131 (11%), Positives = 33/131 (25%), Gaps = 3/131 (2%)
Query: 42 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVM 101
RI L L A+ + S + + + +
Sbjct: 226 RIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLS 285
Query: 102 TCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSS 161
+ G +N +IY+L++ + V + + F +
Sbjct: 286 AITTFYVSDNILVSGSENQFNIYNLRSGK---LVHANILKDADQIWSVNFKGKTLVAAVE 342
Query: 162 GDMSCALWDIE 172
D L ++
Sbjct: 343 KDGQSFLEILD 353
Score = 38.0 bits (86), Expect = 0.001
Identities = 14/64 (21%), Positives = 24/64 (37%)
Query: 277 AFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL 336
++ G DD V+DS+ + L+GHD V L G+ V+ + +
Sbjct: 18 CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVR 77
Query: 337 RIWN 340
Sbjct: 78 VWDI 81
Score = 32.2 bits (71), Expect = 0.096
Identities = 15/91 (16%), Positives = 32/91 (35%), Gaps = 1/91 (1%)
Query: 26 CDTSLVTATGNMEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSY 85
D LV+A + G R H + A+ S N++ + + + +++
Sbjct: 252 SDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLR 311
Query: 86 TTNKVHAIPL-RSSWVMTCAYAPSGSFVACG 115
+ VHA L + + + + A
Sbjct: 312 SGKLVHANILKDADQIWSVNFKGKTLVAAVE 342
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 63.7 bits (153), Expect = 6e-12
Identities = 50/355 (14%), Positives = 103/355 (29%), Gaps = 70/355 (19%)
Query: 47 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLR---------- 96
T + H A I+++ + VS S DG L VWD+ + +
Sbjct: 6 TANAGKAHDADIFSVSA--CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGL 63
Query: 97 ---SSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVR--------VSRELPGHTGY 145
A VA Y + + + + ++ H+ +
Sbjct: 64 HHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFW 123
Query: 146 LSCCRFLDD----NQIVTSSGDMSCALWDIETGQQC------------------ASFIGH 183
+D +++V + + +W S +
Sbjct: 124 ALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTP 183
Query: 184 TGDVMSLSLAPDMRTFVSGACDASAKL------WDIRDGSCKQTFPGHESDINAVTFFPN 237
+ S+ ++ +G + + ++ + + + + + + I +V F P
Sbjct: 184 SQFATSVDISER-GLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ 242
Query: 238 GWAFATGSDD---ATCRLFDIRADQELAMYSHDNIIC-----------GITSVAFSRSGR 283
G A D L++ + + S + S++F+ SG
Sbjct: 243 GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE 302
Query: 284 LLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSC----LGVTEDGMAVATGSWDS 334
L + D WD ER L H + + L V E G ++A
Sbjct: 303 TLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFD 357
Score = 60.3 bits (144), Expect = 9e-11
Identities = 25/214 (11%), Positives = 57/214 (26%), Gaps = 28/214 (13%)
Query: 141 GHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETG------QQCASFIGHTGDVMSLSL-- 192
H + ++ V+ SGD +WD + + S H + + +
Sbjct: 12 AHDADIFSVSA-CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQ 70
Query: 193 -----APDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WAFATGSD 246
A ++ + + + I + + D+ + WA G+
Sbjct: 71 AIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGAS 130
Query: 247 DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG 306
+ D L F+ L +
Sbjct: 131 N------DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPM--- 181
Query: 307 ILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340
+ + ++E G+ +ATG + ++I
Sbjct: 182 ---TPSQFATSVDISERGL-IATGFNNGTVQISE 211
Score = 55.2 bits (131), Expect = 3e-09
Identities = 42/269 (15%), Positives = 68/269 (25%), Gaps = 47/269 (17%)
Query: 57 KIYAMHWGSDSRNLVSASQDGKLIVWDSYTT------------------NKVHAIPLRSS 98
K A + S LV+ G +W + V + S
Sbjct: 126 KWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQ 185
Query: 99 WVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGY---LSCCRFLDDN 155
+ + + G +A G + I L T + S +
Sbjct: 186 FATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGS 244
Query: 156 QIVTSSGDMSCALWDI----------------ETGQQCASFIGHTGDVMSLSLAPDMRTF 199
+ + S + + Q H+ VMSLS T
Sbjct: 245 LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETL 304
Query: 200 VSGACDASAKLWDIRDGSCKQTFPGHESDI----NAVTFFPNGWAFATGSDDATCRLFDI 255
S D + WD++ T H DI + + +G + A L
Sbjct: 305 CSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 364
Query: 256 RADQELAMYSHDNIICGITSVAFSRSGRL 284
M + N + V RS R
Sbjct: 365 ---WRSGMGADLNE--SLCCVCLDRSIRW 388
Score = 38.3 bits (87), Expect = 0.001
Identities = 10/135 (7%), Positives = 41/135 (30%), Gaps = 13/135 (9%)
Query: 217 SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR-------ADQELAMYSHDNI 269
+ H++DI +V+ + + S D +++D + D+ + + H +
Sbjct: 5 ATANAGKAHDADIFSVSACNSF--TVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSG 62
Query: 270 ICGITSV----AFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM 325
+ + + + L+ + + + + + + + +
Sbjct: 63 LHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSF 122
Query: 326 AVATGSWDSFLRIWN 340
+ + +
Sbjct: 123 WALKWGASNDRLLSH 137
Score = 32.5 bits (72), Expect = 0.070
Identities = 15/84 (17%), Positives = 31/84 (36%), Gaps = 4/84 (4%)
Query: 44 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTC 103
+ H + + ++ + L SA DGKL WD T ++ + + +
Sbjct: 278 SSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIE 337
Query: 104 ----AYAPSGSFVACGGLDNICSI 123
A G +A G+ ++ +
Sbjct: 338 EDILAVDEHGDSLAEPGVFDVKFL 361
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 61.0 bits (146), Expect = 5e-11
Identities = 23/240 (9%), Positives = 58/240 (24%), Gaps = 28/240 (11%)
Query: 26 CDTSLVTATGNMEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSY 85
T L +G + + + R + + +DG L
Sbjct: 117 GKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFG 176
Query: 86 TTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICS----IYSLKTREGNVRVSRELPG 141
T ++ G + I+ + G+ + +
Sbjct: 177 TEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEA 236
Query: 142 HT---------------------GYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASF 180
T ++ + + D +TG++ A
Sbjct: 237 LTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAK- 295
Query: 181 IGHTGDVMSLSLAPDMRT--FVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 238
++ S++++ D + + D + + D G ++ +T G
Sbjct: 296 FEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 355
Score = 56.0 bits (133), Expect = 2e-09
Identities = 30/316 (9%), Positives = 69/316 (21%), Gaps = 50/316 (15%)
Query: 69 NLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVA----------CGGLD 118
+ + + V D + I ++ A GSF+A G
Sbjct: 20 DPAHFAAVTQQFVIDGEAGRVIGMID--GGFLPNPVVADDGSFIAHASTVFSRIARGERT 77
Query: 119 NICSIYSLKTREGNVRVSRELP------GHTGYLSCCRFLDDNQIVTSSGDMSCALWDIE 172
+ ++ T + + S S + + D+E
Sbjct: 78 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE 137
Query: 173 TGQQCA-------SFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGH 225
I T D + P
Sbjct: 138 GKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEIT----HTEVFHPED 193
Query: 226 ESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLL 285
E IN + + D+ + + + + + + + G
Sbjct: 194 EFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQ 253
Query: 286 LAGYDDFNCNVWDSMKTERAGILAG-------------------HDNRVSCLGVTEDG-- 324
+A + + + + + + + V++D
Sbjct: 254 VAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKP 313
Query: 325 MAVATGSWDSFLRIWN 340
+ A + D L I +
Sbjct: 314 LLYALSTGDKTLYIHD 329
Score = 53.6 bits (127), Expect = 1e-08
Identities = 30/295 (10%), Positives = 62/295 (21%), Gaps = 38/295 (12%)
Query: 64 GSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMT-------CAYAPSGSFVACGG 116
+ + + + V+D T I L + + P G +
Sbjct: 65 STVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQ 124
Query: 117 LDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQ 176
++ + + ++P + D S A T
Sbjct: 125 FSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPT----APDTFFMHCRDGSLAKVAFGTEGT 180
Query: 177 CASFIGHTGD------VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK--QTFPGHESD 228
+ + + V D+ G K
Sbjct: 181 PEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEA 240
Query: 229 INAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIIC----------------- 271
A + P GW + E + +
Sbjct: 241 ERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH 300
Query: 272 GITSVAFSRSGRLLL--AGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG 324
I S+ S+ + LL D + D+ E + + + + G
Sbjct: 301 EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 355
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 60.3 bits (144), Expect = 6e-11
Identities = 44/302 (14%), Positives = 99/302 (32%), Gaps = 16/302 (5%)
Query: 49 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
RT RG + + + + + S +PS
Sbjct: 14 RTARGT---AVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPS 69
Query: 109 GSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCAL 168
G + A G + ++ T + + +P +G + + +++ + + G+
Sbjct: 70 GYYCASGDVHG--NVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERF 127
Query: 169 WDIETGQQCASFIGHTGDVMSLS----LAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG 224
+ S TG +++ +SG+ D + +++ K TF
Sbjct: 128 GHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGE 187
Query: 225 HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA-----MYSHDNIICGITSVAFS 279
H +++V + P+G FA+ D T L++ + + + + +S
Sbjct: 188 HTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWS 247
Query: 280 RSGRLLLAGYDDFNCNVWD-SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI 338
G + + D +W+ + I G LG+ A+ + S + F+
Sbjct: 248 PDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINF 307
Query: 339 WN 340
N
Sbjct: 308 VN 309
Score = 52.6 bits (124), Expect = 2e-08
Identities = 27/220 (12%), Positives = 64/220 (29%), Gaps = 8/220 (3%)
Query: 44 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTC 103
+ T+ + + W S+S+ + + + + L
Sbjct: 91 THILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMN 150
Query: 104 AYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGD 163
+ S + + ++ S S D + ++ GD
Sbjct: 151 SVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGD 210
Query: 164 MSCALWDIETGQQCAS-------FIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG 216
+ L++ G + + H+G V L+ +PD S + D + K+W++
Sbjct: 211 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATL 270
Query: 217 SCKQTFPGHESDINAVT-FFPNGWAFATGSDDATCRLFDI 255
++T P + A + S + +
Sbjct: 271 KVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310
Score = 43.0 bits (99), Expect = 2e-05
Identities = 13/104 (12%), Positives = 26/104 (25%), Gaps = 3/104 (2%)
Query: 139 LPGHT-GYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMR 197
LP G + S + + + H+ +P
Sbjct: 12 LPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGY 71
Query: 198 TFVSGACDASAKLWDIRDG--SCKQTFPGHESDINAVTFFPNGW 239
SG + ++WD K T P + +++
Sbjct: 72 YCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESK 115
Score = 38.7 bits (88), Expect = 7e-04
Identities = 16/116 (13%), Positives = 35/116 (30%), Gaps = 6/116 (5%)
Query: 59 YAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLD 118
+ S + +G + S V ++P G+ +A D
Sbjct: 200 DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD 259
Query: 119 NICSIYSLKTREGNVRVSRELPGHTGYLSCCRFL--DDNQIVTSSGDMSCALWDIE 172
I+++ T +V + +P T + +V+ S + + E
Sbjct: 260 KTIKIWNVATL----KVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPE 311
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 59.8 bits (144), Expect = 1e-10
Identities = 30/299 (10%), Positives = 81/299 (27%), Gaps = 26/299 (8%)
Query: 63 WGSDSRNL--VSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNI 120
D NL V+ G++ + D T + + ++ + SG ++ G D
Sbjct: 26 NDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHIS-RLSASGRYLFVIGRDGK 84
Query: 121 CSIYSLKTREGNVRVS-RELPGHTGYLSCCRFLDDNQ--IVTSSGDMSCALWDIETGQQC 177
++ L +E + + +++ I + + D ET +
Sbjct: 85 VNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPK 144
Query: 178 -----------ASFIGHTGDVMSLSLAPDMRTFVSGACDA-SAKLWDIRDGSC-KQTFPG 224
V ++ + F+ + L D D + K T
Sbjct: 145 KIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS 204
Query: 225 HESDINAVTFFPNG-WAFATGSDDATCRLFDIRADQELAMYSHDNIIC---GITSVAFSR 280
E ++ + + + + D + + +A+ +
Sbjct: 205 AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPT 264
Query: 281 SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 339
G + + + E + ++ G ++ + + ++
Sbjct: 265 FGPVWATSHMGDDSVALIGTDPE---GHPDNAWKILDSFPALGGGSLFIKTHPNSQYLY 320
Score = 50.6 bits (120), Expect = 1e-07
Identities = 41/338 (12%), Positives = 71/338 (21%), Gaps = 60/338 (17%)
Query: 59 YAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLR-----SSWVMTCAYAPSGSFV- 112
+ + R L +DGK+ + D + ++ S + +
Sbjct: 65 HISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAI 124
Query: 113 ACGGLDNICSIYSLKTRE-------GNVRVSRELPGHTGYLSCCRFLDDNQ--IVTSSGD 163
A I +T E + + ++ IV
Sbjct: 125 AGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKET 184
Query: 164 MSCALWDIETGQQCASFIGHTGDVMS-LSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF 222
L D + + L R F++ A + +
Sbjct: 185 GKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAI 244
Query: 223 PGHESDINAVTFFPNGWAFATGSDDATCRLFDI-------------------------RA 257
N G AT + D
Sbjct: 245 EDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALG 304
Query: 258 DQELAMYSHDNIICGITSVAFSRS-----------GRLLLAGYDDFNCNVWDSMKTERAG 306
L + +H N + + + D E AG
Sbjct: 305 GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPI--AEWAG 362
Query: 307 ILAGHDNRVSCLGVTEDGMAVATGSW-----DSFLRIW 339
I G RV +DG V W +S L +
Sbjct: 363 ITEGQP-RVVQGEFNKDGTEVWFSVWNGKDQESALVVV 399
Score = 39.4 bits (91), Expect = 4e-04
Identities = 18/125 (14%), Positives = 31/125 (24%), Gaps = 11/125 (8%)
Query: 223 PGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSG 282
P + T D L D + + + S SG
Sbjct: 17 PEDRPTQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY---AVHISRLSASG 73
Query: 283 RLLLAGYDDFNCNVWDSMKTERAGILA------GHDNRVSCLGVTEDG-MAVATGSWDSF 335
R L D N+ D + + +A + + + A+A W
Sbjct: 74 RYLFVIGRDGKVNMID-LWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQ 132
Query: 336 LRIWN 340
I +
Sbjct: 133 YVIMD 137
Score = 34.4 bits (78), Expect = 0.018
Identities = 22/195 (11%), Positives = 51/195 (26%), Gaps = 22/195 (11%)
Query: 31 VTATGNMEPIGRIQMRTRRTLRGHLAK-IYAMHWGSDSRNLVSASQDGKLIVWDSYTTNK 89
V TG + + + +T + ++ R ++A+ +V K
Sbjct: 181 VKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK 240
Query: 90 VHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRV----SRELPGHTGY 145
+ AI + G + + + +V + P +
Sbjct: 241 LVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHM-----GDDSVALIGTDPEGHPDNAW- 294
Query: 146 LSCCRFLDDNQIVTSSGDMSCALWDIETGQQC---ASFIGHTGDVMSLSLAPDMRTFVSG 202
+ G S + Q A+ S+++ D++
Sbjct: 295 -------KILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAV-FDIKAMTGD 346
Query: 203 ACDASAKLWDIRDGS 217
D K I + +
Sbjct: 347 GSDPEFKTLPIAEWA 361
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 56.7 bits (135), Expect = 1e-09
Identities = 35/322 (10%), Positives = 74/322 (22%), Gaps = 50/322 (15%)
Query: 63 WGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPL-RSSWVMTCAYAPSGSFV-ACGGLDNI 120
+ ++ + L V D + + + T AP
Sbjct: 4 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGD 63
Query: 121 CSIYSLKTRE--GNVRVSRELPGHTGYLSCCRFLDDNQIV-------------TSSGDMS 165
L T + + +S + D + V
Sbjct: 64 IYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPR 123
Query: 166 CALWDIETGQQCASFIGHTGD--VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP 223
++ G + V + A D +V+G D++ G P
Sbjct: 124 LEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDI---YKMDVKTGKYTVALP 180
Query: 224 GHESD-------------------------INAVTFFPNGWAFATGSDDATCRLFDIRAD 258
+ F + AT D++
Sbjct: 181 LRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTG 240
Query: 259 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCL 318
+ D T + + + + +D +K + A D+ C+
Sbjct: 241 KTHTQEFADLTELYFTGLRSPKDPNQIYGVLNR--LAKYD-LKQRKLIKAANLDHTYYCV 297
Query: 319 GVTEDGMAVATGSWDSFLRIWN 340
+ G + G + L ++N
Sbjct: 298 AFDKKGDKLYLGGTFNDLAVFN 319
Score = 53.2 bits (126), Expect = 1e-08
Identities = 23/209 (11%), Positives = 48/209 (22%), Gaps = 14/209 (6%)
Query: 54 HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVA 113
AK L+ A+ DG L V K+ + + + + A
Sbjct: 133 LEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIY-KMDVKTGKYTVALPLRNWNRKGYSA 191
Query: 114 CGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIET 173
L ++R T+ D++T
Sbjct: 192 PDVLYFWPHQSPRHEFSMLYTIARFKDDKQ------------DPATADLLYGYLSVDLKT 239
Query: 174 GQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVT 233
G+ ++ L +D++ + + V
Sbjct: 240 GKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAAN-LDHTYYCVA 298
Query: 234 FFPNGWAFATGSDDATCRLFDIRADQELA 262
F G G +F+ +++
Sbjct: 299 FDKKGDKLYLGGTFNDLAVFNPDTLEKVK 327
Score = 38.2 bits (87), Expect = 9e-04
Identities = 8/116 (6%), Positives = 22/116 (18%), Gaps = 8/116 (6%)
Query: 232 VTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLL-AGYD 290
+ + D+ +D + G + + R
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKF-GPGTAMMAPDNRTAYVLNNH 60
Query: 291 DFNCNVWDSMKTERAGIL------AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340
+ D + + ++ DG V + +
Sbjct: 61 YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDH 116
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 55.4 bits (132), Expect = 3e-09
Identities = 24/276 (8%), Positives = 54/276 (19%), Gaps = 46/276 (16%)
Query: 58 IYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTC-------AYAPSGS 110
+ + V+D T + I L + + S +
Sbjct: 79 FALASTSFA--RSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSA 136
Query: 111 FVA-CGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALW 169
+ + + S+ + + + S S A
Sbjct: 137 CLLFFLFGSSAAAGLSVPGAS----DDQLTKSASCFHI--HPGAAATHYLGSCPASLAAS 190
Query: 170 DIETGQQCAS------FIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP 223
D+ A + + A + K
Sbjct: 191 DLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAID 250
Query: 224 GHESDINAVTFFPNGWAFATGSDDA-------------------TCRLFDIRADQELAMY 264
G+ES A F G+ + Q
Sbjct: 251 GNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPI 310
Query: 265 SHDNIICGITSVAFSRSGRLLL--AGYDDFNCNVWD 298
S+ + ++ ++ G +++D
Sbjct: 311 SNGH---DSDAIIAAQDGASDNYANSAGTEVLDIYD 343
Score = 45.4 bits (106), Expect = 6e-06
Identities = 17/215 (7%), Positives = 41/215 (19%), Gaps = 21/215 (9%)
Query: 140 PGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVM-------SLSL 192
GH+G + ++D T A +
Sbjct: 72 AGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGN 131
Query: 193 APDMRT-FVSGACDASAKLWDIRDGSCKQTFPGHES-------DINAVTFFPNGWAFATG 244
++A + S Q A+
Sbjct: 132 CASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASD 191
Query: 245 SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER 304
A + A + + + + G L+ A +
Sbjct: 192 LAAAPAAAGIVGAQ---CTGAQNCS---SQAAQANYPGMLVWAVASSILQGDIPAAGATM 245
Query: 305 AGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 339
+ G+++ G + ++ +
Sbjct: 246 KAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMI 280
Score = 39.2 bits (90), Expect = 4e-04
Identities = 15/234 (6%), Positives = 48/234 (20%), Gaps = 26/234 (11%)
Query: 27 DTSLVTATGNMEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYT 86
L+ + + + + + S L D
Sbjct: 135 SACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAA 194
Query: 87 TNKVHAIPL------RSSWVMTCAYAPSGS---------FVACGGLDNICSIYSLKTREG 131
I ++ G ++ E
Sbjct: 195 APAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNES 254
Query: 132 NVRVSRELPGHTGYLSCCR-------FLDDNQIVTSSGDMSCALWDIETGQQCASFIGHT 184
+ ++ + ++ + + + GQ I +
Sbjct: 255 GRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGP-ISNG 313
Query: 185 GDVMSLSLAPDMRT--FVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP 236
D ++ A D + + + A ++D + + + +++
Sbjct: 314 HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGP-ESLSVQN 366
Score = 28.4 bits (62), Expect = 1.4
Identities = 18/174 (10%), Positives = 37/174 (21%), Gaps = 18/174 (10%)
Query: 24 AACDTSLVTATGNMEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 83
+C SL + P + + A + + +
Sbjct: 181 GSCPASLAASDLAAAPA-AAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIP 239
Query: 84 SYTTNKVHAIPLRSSWVMTCAYAPSGS------------FVACGGLDNICSIYSLKTREG 131
+ AI S + +G + C + T
Sbjct: 240 AAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSV 299
Query: 132 NVRVSREL--PGHTGYLSCCRFLDDNQ---IVTSSGDMSCALWDIETGQQCASF 180
V + + D S+G ++D + Q +S
Sbjct: 300 TASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSV 353
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 54.6 bits (130), Expect = 4e-09
Identities = 25/262 (9%), Positives = 58/262 (22%), Gaps = 30/262 (11%)
Query: 64 GSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSI 123
+D + L A+ V + P+G ++ ++
Sbjct: 83 SADGKRLYVANITPAASVTV-IDAVSKKMLS-EIDTAACVLAYPAGDDRFTALCESGKAL 140
Query: 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ----IVTSSGDMSCALWDIETGQQC-- 177
G F++ ++ + ++ + D +
Sbjct: 141 TVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFG 200
Query: 178 ASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN 237
+ T + P + + + G+ G D P
Sbjct: 201 KPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHKGT-----DGSHKD-------PG 248
Query: 238 GWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNV 296
+ A Q++ + S+ S + L + V
Sbjct: 249 TQVWVYDLKSKQRVARWDLAQQKVEP---------LVSIQVSEDDKPLFYGLTATSDLVV 299
Query: 297 WDSMKTERAGILAGHDNRVSCL 318
D+ + N S L
Sbjct: 300 MDARTGALQHVEKQIGNTSSLL 321
Score = 53.1 bits (126), Expect = 1e-08
Identities = 23/200 (11%), Positives = 35/200 (17%), Gaps = 15/200 (7%)
Query: 153 DDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMS---LSLAPDMRT---FVSGACDA 206
++ + + D T +
Sbjct: 37 YFSRGSHGTRTDVVEIIDNTTLDHAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITP 96
Query: 207 SAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WAFATGS-DDATCRLFDIRADQELAMY 264
+A + I S K V +P G F + +E
Sbjct: 97 AASVTVIDAVSKKML--SEIDTAACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRT 154
Query: 265 SHDNIICGITSVAFS---RSGRLLLAGYDDFNCNVWD--SMKTERAGILAGHDNRVSCLG 319
D I AF R L N D K + + G
Sbjct: 155 MSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEG 214
Query: 320 VTEDGMAVATGSWDSFLRIW 339
GM
Sbjct: 215 WRPGGMQQTAVQAKQNRYYV 234
Score = 48.1 bits (113), Expect = 6e-07
Identities = 21/196 (10%), Positives = 41/196 (20%), Gaps = 29/196 (14%)
Query: 168 LWDIETGQQCASFIGHTGDVMSLSLAPDMRTFV----------SGACDASAKLWDIRDGS 217
++D + + G ++APD + V G ++ D
Sbjct: 2 VYDADAKKLLGQI--DGGFGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLD 59
Query: 218 CKQTFPGHESDINAVTFFP------NGWAFATGSDDATCRLFDIRADQELAMYSHDNIIC 271
V +G + + I A + + D
Sbjct: 60 HAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLSEID---- 115
Query: 272 GITSVAFSRSGRLLLA--GYDDFNCNVWDSMKTE---RAGILAGHDNRVSCLGVTEDGM- 325
V +G V + R A D V
Sbjct: 116 TAACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYK 175
Query: 326 -AVATGSWDSFLRIWN 340
++ +R +
Sbjct: 176 GDYLFTTYGGNVRSAD 191
Score = 31.5 bits (70), Expect = 0.14
Identities = 10/139 (7%), Positives = 23/139 (16%), Gaps = 29/139 (20%)
Query: 49 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYT-TNKVHAIPLRSSWVMTCAYAP 107
+ A W + + T+ H P
Sbjct: 201 KPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHKGTDGSHK-------------DP 247
Query: 108 SGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ---IVTSSGDM 164
++ L + +D++ ++
Sbjct: 248 GTQVWVYDLKSKQRVARWDLAQQ-----------KVEPLVSIQVSEDDKPLFYGLTATSD 296
Query: 165 SCALWDIETGQQCASFIGH 183
+ D TG
Sbjct: 297 L-VVMDARTGALQHVEKQI 314
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 53.0 bits (125), Expect = 2e-08
Identities = 36/269 (13%), Positives = 75/269 (27%), Gaps = 19/269 (7%)
Query: 49 RTLRGHLAKIY---AMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAI--------PLRS 97
GH + + S+ L S + GK+IVW + +++ + +
Sbjct: 56 VQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLA 115
Query: 98 SWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQI 157
+ ++ G + G + GN + +
Sbjct: 116 GPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRS 175
Query: 158 VTSSGDMSCA---LWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLW--- 211
+T D S + + V + +PD FV
Sbjct: 176 MTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDG 235
Query: 212 -DIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNII 270
+ + + FAT DAT R++D+ + + ++ D
Sbjct: 236 KSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQ 295
Query: 271 CGITSVAFSRSG-RLLLAGYDDFNCNVWD 298
G V +G +++ D N ++
Sbjct: 296 LGNQQVGVVATGNGRIISLSLDGTLNFYE 324
Score = 53.0 bits (125), Expect = 2e-08
Identities = 25/224 (11%), Positives = 62/224 (27%), Gaps = 10/224 (4%)
Query: 42 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQ--DGKLIVWDSYTTNKVHAIPLRSSW 99
+++ + + I + W + R L + D + + N + + S
Sbjct: 102 SVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQR 161
Query: 100 VMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVT 159
+ C S + D+ ++ R ++ F D+
Sbjct: 162 INACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFV 221
Query: 160 SSGDMSCALWD-----IETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIR 214
+ + E + + D + F + DA+ ++WD+
Sbjct: 222 ITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVT 281
Query: 215 DGSCKQTFPGHESDINAVT---FFPNGWAFATGSDDATCRLFDI 255
C Q + + + + S D T +++
Sbjct: 282 TSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 51.8 bits (122), Expect = 4e-08
Identities = 36/314 (11%), Positives = 78/314 (24%), Gaps = 25/314 (7%)
Query: 49 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPL----RSSWVMTCA 104
T R + + + + + +KV + SS V T
Sbjct: 14 STQRNF---TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVK 70
Query: 105 YAP--SGSFVACGGLDNICSIYSLKTREGNVRV----SRELPGHTGYLSCCRFLDDNQ-- 156
++P ++ G ++ + + V E G +S + + +
Sbjct: 71 FSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRL 130
Query: 157 -IVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAK----LW 211
+V D ++G GH+ + + L D +
Sbjct: 131 CVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGP 190
Query: 212 DIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCR--LFDIRADQELAMYSHDNI 269
+ + +T S + V F P+ F + +
Sbjct: 191 PFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEP 250
Query: 270 ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVT---EDGMA 326
+ G + D VWD ++ ++ V
Sbjct: 251 VQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGR 310
Query: 327 VATGSWDSFLRIWN 340
+ + S D L +
Sbjct: 311 IISLSLDGTLNFYE 324
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 53.0 bits (126), Expect = 2e-08
Identities = 35/317 (11%), Positives = 76/317 (23%), Gaps = 43/317 (13%)
Query: 63 WGSDSRNL--VSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNI 120
D NL V+ G++ + D + V I V + SG ++ G D
Sbjct: 26 NDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT-GYAVHISRMSASGRYLLVIGRDAR 84
Query: 121 CSIYSLKTREGNVRVS-RELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCAS 179
+ L +E + S +++ + ++
Sbjct: 85 IDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPK 144
Query: 180 FI-------------GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC--KQTFPG 224
I V ++ + + F+ + L T G
Sbjct: 145 QIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG 204
Query: 225 HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL--------------AMYSHDNII 270
+ + + F T ++++ D+ L
Sbjct: 205 AAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKY 264
Query: 271 CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVA-- 328
+ S + G + L G D N + K L G + +
Sbjct: 265 GPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAE---LQGQGGGSLFIKTHPKSSHLYVD 321
Query: 329 -----TGSWDSFLRIWN 340
+ +++
Sbjct: 322 TTFNPDARISQSVAVFD 338
Score = 39.6 bits (91), Expect = 4e-04
Identities = 21/196 (10%), Positives = 51/196 (26%), Gaps = 31/196 (15%)
Query: 60 AMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLD- 118
+ + AS + + + T KV + + +T + F+A GG D
Sbjct: 157 QTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDS 216
Query: 119 ----------NICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ------------ 156
N + + +++ + ++ F+
Sbjct: 217 SHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDG 276
Query: 157 IVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFV-------SGACDASAK 209
++ G ++ A G G + + P S
Sbjct: 277 SISLIGTDPK-NHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVA 335
Query: 210 LWDIRDGSCKQTFPGH 225
++D+++ K
Sbjct: 336 VFDLKNLDAKYQVLPI 351
Score = 29.2 bits (64), Expect = 0.82
Identities = 20/159 (12%), Positives = 39/159 (24%), Gaps = 17/159 (10%)
Query: 45 MRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIP----LRSSWV 100
T G + W S R ++A+ + + ++ A+
Sbjct: 196 DNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGR 255
Query: 101 MTCAYAPSGSFVACGGLDNICSIYSLKTREGNVR-----VSRELPGHTGYLSCCRFLDDN 155
P V SI + T N EL G G + +
Sbjct: 256 GANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKS 315
Query: 156 QIV--------TSSGDMSCALWDIETGQQCASFIGHTGD 186
+ + S A++D++ +
Sbjct: 316 SHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEW 354
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 44.5 bits (103), Expect = 8e-06
Identities = 37/272 (13%), Positives = 71/272 (26%), Gaps = 7/272 (2%)
Query: 71 VSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFV-ACGGLDNICSIYSLKTR 129
++ S+ + V D + IP+ S M +P G+ V N SI T
Sbjct: 6 IANSESDNISVIDVTSNKVTATIPV-GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN 64
Query: 130 EGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMS 189
V +P + D Q+ ++ S T A + +
Sbjct: 65 ----NVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLG 120
Query: 190 LSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDAT 249
L+L+PD + + P+G + D+
Sbjct: 121 LALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSM 180
Query: 250 CRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA 309
+ +V + + FN T +
Sbjct: 181 SISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARI 240
Query: 310 GHDNRVSCLGVTEDG-MAVATGSWDSFLRIWN 340
+ + VT DG S+ + + + +
Sbjct: 241 PVGPDPAGIAVTPDGKKVYVALSFCNTVSVID 272
Score = 38.7 bits (88), Expect = 6e-04
Identities = 8/74 (10%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Query: 199 FVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WAFATGSDDATCRLFDIRA 257
+++ + + + D+ T P S+ P+G + + + D
Sbjct: 5 YIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTAT 63
Query: 258 DQELAMYSHDNIIC 271
+ +A +
Sbjct: 64 NNVIATVPAGSSPQ 77
Score = 37.9 bits (86), Expect = 0.001
Identities = 18/183 (9%), Positives = 35/183 (19%), Gaps = 2/183 (1%)
Query: 81 VWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELP 140
T+N V + A +P G + + + +
Sbjct: 99 SVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR 158
Query: 141 GHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFV 200
G S +S + +
Sbjct: 159 SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTN 218
Query: 201 SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WAFATGSDDATCRLFDIRADQ 259
+ + D P D + P+G + S T + D +
Sbjct: 219 VDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNT 277
Query: 260 ELA 262
A
Sbjct: 278 ITA 280
Score = 35.6 bits (80), Expect = 0.006
Identities = 14/108 (12%), Positives = 29/108 (26%), Gaps = 10/108 (9%)
Query: 142 HTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRT-FV 200
+G + ++ D T + A D +++ PD + +V
Sbjct: 202 PSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKKVYV 260
Query: 201 SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA 248
+ + + + D + T V P GS
Sbjct: 261 ALSFCNTVSVIDTATNTITATMA--------VGKNPYASGQFIGSIPV 300
Score = 35.2 bits (79), Expect = 0.008
Identities = 8/60 (13%), Positives = 20/60 (33%), Gaps = 4/60 (6%)
Query: 240 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLL-AGYDDFNCNVWD 298
A+ S+ + D+ +++ A + S G + A + ++ D
Sbjct: 4 AYIANSESDNISVIDVTSNKVTATIPVGS---NPMGAVISPDGTKVYVANAHSNDVSIID 60
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 42.9 bits (99), Expect = 3e-05
Identities = 23/190 (12%), Positives = 51/190 (26%), Gaps = 7/190 (3%)
Query: 158 VTSSGDMSCALWDI--ETGQQCASFIGHTGDVMSLSLAPDMRT-FVSGACDASAKLWDIR 214
+ S +W++ E + G V + ++PD R +V + + I
Sbjct: 8 IASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIA 67
Query: 215 DGSCKQTFPGHE---SDINAVTFFPNGWAFATGSDDA-TCRLFDIRADQELAMYSHDNII 270
TF + ++ G GS +A + + + + +
Sbjct: 68 PDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL 127
Query: 271 CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATG 330
G S S R L + ++ + + + G M
Sbjct: 128 DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPN 187
Query: 331 SWDSFLRIWN 340
++
Sbjct: 188 EQYAYCVNEL 197
Score = 31.3 bits (69), Expect = 0.14
Identities = 9/104 (8%), Positives = 30/104 (28%), Gaps = 4/104 (3%)
Query: 240 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLA-GYDDFNCNVWD 298
+ + ++++ + L + ++ + + S R L +F +
Sbjct: 6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYR 65
Query: 299 ---SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 339
+ ++ + G V GS+++
Sbjct: 66 IAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSV 109
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 38.4 bits (89), Expect = 0.001
Identities = 29/254 (11%), Positives = 61/254 (24%), Gaps = 57/254 (22%)
Query: 57 KIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSS----------WVMTCAYA 106
+ + + A GK Y + + + A
Sbjct: 167 DVAWQVIVDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAV 226
Query: 107 PSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMS- 165
+G+F G + R + +R +P D + ++G +S
Sbjct: 227 KAGNFKTIGDSKVP----VVDGRGES-EFTRYIPVP-KNPHGLNTSPDGKYFIANGKLSP 280
Query: 166 -CALWDIETGQQC--------ASFIGHTGD---VMSLSLAPDMRTFVSGACDASAKLWD- 212
++ I+ + + + + + + D+ W+
Sbjct: 281 TVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNI 340
Query: 213 --------------IRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCR------- 251
IR Q PGH + +G S + R
Sbjct: 341 ADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLSKFSKDRFLPVGPL 400
Query: 252 ------LFDIRADQ 259
L DI ++
Sbjct: 401 HPENDQLIDISGEE 414
Score = 33.7 bits (77), Expect = 0.028
Identities = 14/155 (9%), Positives = 35/155 (22%), Gaps = 10/155 (6%)
Query: 153 DDNQIVTSSGDMSCALWDIETGQQCASFIGHTGDVMSLSLAPDMRTFVSGACDASAKLWD 212
++ + A+ T + ++ + G +
Sbjct: 186 TGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGD-SKVPVVDG 244
Query: 213 IRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR---------ADQELAM 263
+ + P ++ T + A G T + I + +
Sbjct: 245 RGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTI 304
Query: 264 YSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 298
+ + G F G + D W+
Sbjct: 305 VAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWN 339
Score = 31.0 bits (70), Expect = 0.21
Identities = 33/293 (11%), Positives = 74/293 (25%), Gaps = 42/293 (14%)
Query: 70 LVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTR 129
S G++ V + ++ IP + + G+ N K
Sbjct: 14 FWSGGHQGEVRVLGVPSMRELMRIP---------VFNVDSATGW--GITN-----ESKEI 57
Query: 130 EGNVRVSRELPGHTGYLSCCRFLDDNQ--IVTSSGDMSCALWDIETGQQCASF-IGHTGD 186
G + H ++S D + + + A ++ + I +
Sbjct: 58 LGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQA 117
Query: 187 VMSLSLAPDMRT-FVSGACDASAKL-WDIRDGSCKQTFPGHE----------------SD 228
+ L L +T +V + D D S ++ +
Sbjct: 118 IHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVDGN 177
Query: 229 INAVTFFPNG-WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLA 287
++ G +A +T + + N+ A ++G
Sbjct: 178 LDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERI---AAAVKAGNFKTI 234
Query: 288 GYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340
G V ++E + N + +A G + +
Sbjct: 235 GDSK-VPVVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIA 286
Score = 29.5 bits (66), Expect = 0.61
Identities = 12/85 (14%), Positives = 23/85 (27%), Gaps = 14/85 (16%)
Query: 240 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 299
F +G R+ + + +EL F+ G + + +
Sbjct: 13 GFWSGGHQGEVRVLGVPSMRELM-----------RIPVFNVDSA-TGWGITNESKEILGG 60
Query: 300 MKTERAGILAGHDNRVSCLGVTEDG 324
+ G H +S DG
Sbjct: 61 DQQYLNGDC--HHPHISMTDGRYDG 83
>d1ea0a1 b.80.4.1 (A:1203-1472) Alpha subunit of glutamate synthase,
C-terminal domain {Azospirillum brasilense [TaxId: 192]}
Length = 270
Score = 29.9 bits (67), Expect = 0.33
Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 8/75 (10%)
Query: 245 SDDATCRLFD-----IRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 299
++D + +R + ++ N I G T + + +G+L AG V +S
Sbjct: 90 ANDYVGKGLSGGTIVVRPTTSSPLETNKNTIIGNTVLYGATAGKLFAAGQAGERFAVRNS 149
Query: 300 MKTERAGILAGHDNR 314
T ++ G +
Sbjct: 150 GAT---VVVEGCGSN 161
>d2ahua2 c.124.1.2 (A:4-276) Putative enzyme YdiF N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 273
Score = 28.8 bits (64), Expect = 0.93
Identities = 13/74 (17%), Positives = 23/74 (31%)
Query: 10 EAETLKNAIRDARKAACDTSLVTATGNMEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRN 69
EA TL A+ D K ++ R + L K S
Sbjct: 39 EATTLITALADKYKQTQTPRNLSIISPTGLGDRADRGISPLAQEGLVKWALCGHWGQSPR 98
Query: 70 LVSASQDGKLIVWD 83
+ ++ K+I ++
Sbjct: 99 ISDLAEQNKIIAYN 112
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein
6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 465
Score = 28.0 bits (61), Expect = 2.1
Identities = 14/91 (15%), Positives = 27/91 (29%), Gaps = 12/91 (13%)
Query: 150 RFLDDNQIVTSSGDMSCALWDIETGQQCASFIGHT---GDVMSLSLAPDMRT--FVSGAC 204
+++ D + + + LW++ET G + ++PD F
Sbjct: 23 KWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVE 82
Query: 205 -------DASAKLWDIRDGSCKQTFPGHESD 228
L I G + P S+
Sbjct: 83 PIYQHSYTGYYVLSKIPHGDPQSLDPPEVSN 113
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue
{Nostoc punctiforme [TaxId: 272131]}
Length = 302
Score = 27.7 bits (60), Expect = 2.1
Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 273 ITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW 332
+ ++A + G + + ++ + I A + +VS L T +G VATG
Sbjct: 30 LENLASAPDGTIFVTNHE--VGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWN 87
Query: 333 DSFLRIWN 340
+ + +
Sbjct: 88 ADSIPVVS 95
>d1x6va1 b.122.1.3 (A:229-389) ATP sulfurylase N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 161
Score = 27.2 bits (60), Expect = 2.2
Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 2 NELDSLRQEAETLKNAIRDARKAACDTSLVTATGNMEPI 40
N+L + +AETL + ++ A G P+
Sbjct: 14 NKLHLAKTDAETLPALKINKV-DMQWVQVL-AEGWATPL 50
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 324
Score = 27.4 bits (60), Expect = 2.8
Identities = 7/18 (38%), Positives = 8/18 (44%)
Query: 133 VRVSRELPGHTGYLSCCR 150
R PGHT +L R
Sbjct: 305 ARPVHWQPGHTAFLVKLR 322
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga
maritima [TaxId: 2336]}
Length = 266
Score = 27.0 bits (59), Expect = 2.9
Identities = 5/30 (16%), Positives = 10/30 (33%)
Query: 127 KTREGNVRVSRELPGHTGYLSCCRFLDDNQ 156
K +R + HT Y+ + +
Sbjct: 236 KPVPERLRPVDRMVAHTAYMIFATKVCRRE 265
>d1njha_ b.128.1.1 (A:) Hypothetical protein YojF {Bacillus subtilis
[TaxId: 1423]}
Length = 118
Score = 25.9 bits (57), Expect = 3.8
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 272 GITSVAFSRSGRLLLAGYDD 291
G+T RLL+AG+
Sbjct: 82 GLTEYTVDEENRLLMAGHLP 101
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852
{Thermoplasma acidophilum [TaxId: 2303]}
Length = 250
Score = 26.2 bits (57), Expect = 5.8
Identities = 6/24 (25%), Positives = 11/24 (45%)
Query: 127 KTREGNVRVSRELPGHTGYLSCCR 150
REG R + + HT +++
Sbjct: 218 LVREGATRPASDDLTHTAFITFAI 241
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase
(phosphotriesterase, DFP) {Squid (Loligo vulgaris)
[TaxId: 6622]}
Length = 314
Score = 26.2 bits (56), Expect = 6.0
Identities = 8/57 (14%), Positives = 14/57 (24%)
Query: 53 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
H M + D+ LV+ + V+ I + P
Sbjct: 223 THEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQT 279
>d2ixna1 a.268.1.1 (A:3-299) Serine/threonine-protein phosphatase 2A
regulatory subunit B', PTPA {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 297
Score = 26.0 bits (57), Expect = 6.4
Identities = 8/27 (29%), Positives = 11/27 (40%)
Query: 145 YLSCCRFLDDNQIVTSSGDMSCALWDI 171
Y C F++ + S S L DI
Sbjct: 232 YFGCIAFINKVKSSASLRWHSPMLDDI 258
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 264
Score = 26.1 bits (57), Expect = 6.7
Identities = 8/31 (25%), Positives = 11/31 (35%)
Query: 127 KTREGNVRVSRELPGHTGYLSCCRFLDDNQI 157
VR + GHT +L R L +
Sbjct: 233 NVVGLAVRPQHSMRGHTAFLVATRRLAPGAV 263
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus
[TaxId: 1280]}
Length = 319
Score = 25.8 bits (55), Expect = 8.8
Identities = 20/228 (8%), Positives = 55/228 (24%), Gaps = 16/228 (7%)
Query: 62 HWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNIC 121
++ + + +G + + T + G C D
Sbjct: 46 NFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKS 105
Query: 122 SIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMSCALWDIETGQQCASFI 181
+ E + + + D+ + S G + +
Sbjct: 106 TGGIFAATENGDNLQDIIEDLSTAYCI-----DDMVFDSKGGFYFTDFRGYSTNPLGGVY 160
Query: 182 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 241
+ D +++ + +G ++ + + + + VT P G
Sbjct: 161 YVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATI 220
Query: 242 ATGSDDATCRLFDIRADQELAMYSHDNIICGITS----VAFSRSGRLL 285
+ S DN+ + + F++ G +
Sbjct: 221 PYYFTGHEG-------PDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPI 261
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.133 0.423
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,281,319
Number of extensions: 56602
Number of successful extensions: 552
Number of sequences better than 10.0: 1
Number of HSP's gapped: 280
Number of HSP's successfully gapped: 143
Length of query: 340
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 254
Effective length of database: 1,226,816
Effective search space: 311611264
Effective search space used: 311611264
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)