RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy15426
         (251 letters)



>d2hw4a1 d.322.1.1 (A:5-122) Phosphohistidine phosphatase 1, PHP14
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 118

 Score = 25.1 bits (55), Expect = 5.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 222 IDFIGVFRRVLIILHSKEVEEKKKSN 247
           ID  GVF+ VLI +HS        + 
Sbjct: 10  IDSDGVFKYVLIRVHSAPRSGAPAAE 35


>d2r6gf1 e.70.1.1 (F:13-260) Maltose transport system permease
           protein MalF {Escherichia coli [TaxId: 562]}
          Length = 248

 Score = 25.6 bits (56), Expect = 5.9
 Identities = 13/65 (20%), Positives = 25/65 (38%), Gaps = 6/65 (9%)

Query: 134 LFVSFTLAAIFAREGQWIYIGGSLMTMLSTLITLSLANLFFGSKLLFDVT-LYLGLVIMC 192
           L        +       +Y  G  +  ++TLI  S     F ++  +    +Y G+  M 
Sbjct: 10  LLGLLVGYLVVL-----MYAQGEYLFAITTLILSSAGLYIFANRKAYAWRYVYPGMAGMG 64

Query: 193 GFILY 197
            F+L+
Sbjct: 65  LFVLF 69


>d1uwka_ e.51.1.1 (A:) Urocanate hydratase HutU {Pseudomonas putida
           [TaxId: 303]}
          Length = 554

 Score = 25.1 bits (55), Expect = 8.8
 Identities = 16/92 (17%), Positives = 27/92 (29%), Gaps = 14/92 (15%)

Query: 148 GQWIYIGGSLMTMLSTLITLSLANLFFGSKLLFDVTLYLGL----------VIMCGFILY 197
           G WIYIG   +   +    +      +G  L     L  GL            + G    
Sbjct: 132 GSWIYIGSQGIVQGTYETFVEAGRQHYGGSLKGKWVLTAGLGGMGGAQPLAATLAGACSL 191

Query: 198 ----DTQLILEKVKQGDKDHVSHCIDLFIDFI 225
                   I  +++    D  +  +D  +  I
Sbjct: 192 NIESQQSRIDFRLETRYVDEQATDLDDALVRI 223


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.327    0.140    0.398 

Gapped
Lambda     K      H
   0.267   0.0614    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 824,545
Number of extensions: 34960
Number of successful extensions: 97
Number of sequences better than 10.0: 1
Number of HSP's gapped: 97
Number of HSP's successfully gapped: 10
Length of query: 251
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 168
Effective length of database: 1,268,006
Effective search space: 213025008
Effective search space used: 213025008
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 52 (24.1 bits)