BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15432
(1255 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1O5Z|A Chain A, Crystal Structure Of Folylpolyglutamate Synthase (Tm0166)
From Thermotoga Maritima At 2.10 A Resolution
Length = 442
Score = 116 bits (290), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 58/327 (17%)
Query: 111 IHISGTKGKGSTCAYCESILRSHGFSTGFFSSPHLIEVRERIKLNGEPISYDKFTKYFWT 170
IHI GT GKGS +IL S G+ G + SPHL RERI+LN E IS + K + T
Sbjct: 55 IHIGGTNGKGSVANMVSNILVSQGYRVGSYYSPHLSTFRERIRLNEEYISEEDVVKIYET 114
Query: 171 VYNALHAKRKHAEDMPAYFKFLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNII-PNTAV 229
+ L+ K P++F+ +T M+F F ++ D ++EVG+GGR D TN++ P +
Sbjct: 115 MEPILNELDKEEIFSPSFFEVVTAMAFLYFAEKNVDIAVLEVGLGGRLDATNVVFPLCST 174
Query: 230 VGITSLGYDHTAVLGNTIEEITMQKAGIMKPNCIAVTSANQRGPCKQILLETSRALNCVL 289
I ++ DH LG TIE+I +K+GI+K VT +R K ++ + +R +
Sbjct: 175 --IVTVDRDHEKTLGYTIEQIAWEKSGIIKERVPLVTGERKREALK-VMEDVARKKSS-- 229
Query: 290 LEAPSILNYRWRGQPLDEDWKSTVQSINISLAIQLAYLWMFRMNKSAELKSVIDKFLAEM 349
R +D+D+ V+S+ L R + E + + + M
Sbjct: 230 -----------RMYVIDKDFSVKVKSLK---------LHENRFDYCGE--NTFEDLVLTM 267
Query: 350 RVSSPNETPGGQGHLSSCETPGGQGHLSFSETPGGQGHLTGNQSSLLMGPHFEIDPKTYR 409
+ P++ L + E G L SE
Sbjct: 268 --NGPHQIENAGVALKTLEATG----LPLSEKA------------------------IRE 297
Query: 410 GIKACVWPGRVQVIRKNNFKYFLDGAH 436
G+K GR +++ KN Y LDGAH
Sbjct: 298 GLKNAKNLGRFEILEKNGKMYILDGAH 324
Score = 116 bits (290), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 58/327 (17%)
Query: 723 IHISGTKGKGSTCAYCESILRSHGFSTGFFSSPHLIEVRERIKLNGEPISYDKFTKYFWT 782
IHI GT GKGS +IL S G+ G + SPHL RERI+LN E IS + K + T
Sbjct: 55 IHIGGTNGKGSVANMVSNILVSQGYRVGSYYSPHLSTFRERIRLNEEYISEEDVVKIYET 114
Query: 783 VYNALHAKRKHAEDMPAYFKFLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNII-PNTAV 841
+ L+ K P++F+ +T M+F F ++ D ++EVG+GGR D TN++ P +
Sbjct: 115 MEPILNELDKEEIFSPSFFEVVTAMAFLYFAEKNVDIAVLEVGLGGRLDATNVVFPLCST 174
Query: 842 VGITSLGYDHTAVLGNTIEEITMQKAGIMKPNCIAVTSANQRGPCKQILLETSRALNCVL 901
I ++ DH LG TIE+I +K+GI+K VT +R K ++ + +R +
Sbjct: 175 --IVTVDRDHEKTLGYTIEQIAWEKSGIIKERVPLVTGERKREALK-VMEDVARKKSS-- 229
Query: 902 LEAPSILNYRWRGQPLDEDWKSTVQSINISLAIQLAYLWMFRMNKSAELKSVIDKFLAEM 961
R +D+D+ V+S+ L R + E + + + M
Sbjct: 230 -----------RMYVIDKDFSVKVKSLK---------LHENRFDYCGE--NTFEDLVLTM 267
Query: 962 RVSSPNETPGGQGHLSSCETPGGQGHLSFSETPGGQGHLTGNQSSLLMGPHFEIDPKTYR 1021
+ P++ L + E G L SE
Sbjct: 268 --NGPHQIENAGVALKTLEATG----LPLSEKA------------------------IRE 297
Query: 1022 GIKACVWPGRVQVIRKNNFKYFLDGAH 1048
G+K GR +++ KN Y LDGAH
Sbjct: 298 GLKNAKNLGRFEILEKNGKMYILDGAH 324
>pdb|3N2A|A Chain A, Crystal Structure Of Bifunctional Folylpolyglutamate
SynthaseDIHYDROFOLATE SYNTHASE FROM YERSINIA PESTIS CO92
pdb|3NRS|A Chain A, Crystal Structure Of Ligand-Free Bifunctional
Folylpolyglutamate SynthaseDIHYDROFOLATE SYNTHASE FROM
YERSINIA PESTIS C092
pdb|3PYZ|A Chain A, Crystal Structure Of Bifunctional Folylpolyglutamate
SynthaseDIHYDROFOLATE SYNTHASE COMPLEXED WITH AMPPNP AND
MN ION FROM Yersinia Pestis C092
pdb|3QCZ|A Chain A, Crystal Structure Of Bifunctional Folylpolyglutamate
SynthaseDIHYDROFOLATE SYNTHASE WITH MN, AMPPNP AND
L-Glutamate Bound
Length = 437
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 99/184 (53%), Gaps = 13/184 (7%)
Query: 76 LRKDPVEMQAVQVDQVVQYLGHLNITLDDIKKLNVIHISGTKGKGSTCAYCESILRSHGF 135
L P+E+ +V QV + L L + ++GT GKG+TC E+IL + G
Sbjct: 26 LHSQPIELGLERVKQVAERLDLLK------PAPKIFTVAGTNGKGTTCCTLEAILLAAGL 79
Query: 136 STGFFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMPAYFKFLTVM 195
G +SSPHL+ ER+++ G+ +S + + F + + + YF+F T+
Sbjct: 80 RVGVYSSPHLLRYTERVRIQGQELSEAEHSHSFAQI------EAGRGDISLTYFEFGTLS 133
Query: 196 SFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEITMQKA 255
+ +F + K D VI+EVG+GGR D TNI+ ++ V ITS+ DHT LG E I +KA
Sbjct: 134 ALQLFKQAKLDVVILEVGLGGRLDATNIV-DSDVAAITSIALDHTDWLGYDRESIGREKA 192
Query: 256 GIMK 259
G+ +
Sbjct: 193 GVFR 196
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 99/184 (53%), Gaps = 13/184 (7%)
Query: 688 LRKDPVEMQAVQVDQVVQYLGHLNITLDDIKKLNVIHISGTKGKGSTCAYCESILRSHGF 747
L P+E+ +V QV + L L + ++GT GKG+TC E+IL + G
Sbjct: 26 LHSQPIELGLERVKQVAERLDLLK------PAPKIFTVAGTNGKGTTCCTLEAILLAAGL 79
Query: 748 STGFFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMPAYFKFLTVM 807
G +SSPHL+ ER+++ G+ +S + + F + + + YF+F T+
Sbjct: 80 RVGVYSSPHLLRYTERVRIQGQELSEAEHSHSFAQI------EAGRGDISLTYFEFGTLS 133
Query: 808 SFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEITMQKA 867
+ +F + K D VI+EVG+GGR D TNI+ ++ V ITS+ DHT LG E I +KA
Sbjct: 134 ALQLFKQAKLDVVILEVGLGGRLDATNIV-DSDVAAITSIALDHTDWLGYDRESIGREKA 192
Query: 868 GIMK 871
G+ +
Sbjct: 193 GVFR 196
>pdb|1W78|A Chain A, E.Coli Folc In Complex With Dhpp And Adp
pdb|1W7K|A Chain A, E.Coli Folc In Complex With Adp, Without Folate Substrate
Length = 422
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 86/150 (57%), Gaps = 7/150 (4%)
Query: 110 VIHISGTKGKGSTCAYCESILRSHGFSTGFFSSPHLIEVRERIKLNGEPISYDKFTKYFW 169
V ++GT GKG+TC ESIL + G+ G +SSPHL+ ER+++ G+ + T F
Sbjct: 51 VFTVAGTNGKGTTCRTLESILMAAGYKVGVYSSPHLVRYTERVRVQGQELPESAHTASFA 110
Query: 170 TVYNALHAKRKHAEDMPAYFKFLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAV 229
+ +A + YF++ T+ + ++F + + D VI+EVG+GGR D TNI+ + V
Sbjct: 111 EIESA------RGDISLTYFEYGTLSALWLFKQAQLDVVILEVGLGGRLDATNIV-DADV 163
Query: 230 VGITSLGYDHTAVLGNTIEEITMQKAGIMK 259
+TS+ DHT LG E I + AGI +
Sbjct: 164 AVVTSIALDHTDWLGPDRESIGREXAGIFR 193
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 86/150 (57%), Gaps = 7/150 (4%)
Query: 722 VIHISGTKGKGSTCAYCESILRSHGFSTGFFSSPHLIEVRERIKLNGEPISYDKFTKYFW 781
V ++GT GKG+TC ESIL + G+ G +SSPHL+ ER+++ G+ + T F
Sbjct: 51 VFTVAGTNGKGTTCRTLESILMAAGYKVGVYSSPHLVRYTERVRVQGQELPESAHTASFA 110
Query: 782 TVYNALHAKRKHAEDMPAYFKFLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAV 841
+ +A + YF++ T+ + ++F + + D VI+EVG+GGR D TNI+ + V
Sbjct: 111 EIESA------RGDISLTYFEYGTLSALWLFKQAQLDVVILEVGLGGRLDATNIV-DADV 163
Query: 842 VGITSLGYDHTAVLGNTIEEITMQKAGIMK 871
+TS+ DHT LG E I + AGI +
Sbjct: 164 AVVTSIALDHTDWLGPDRESIGREXAGIFR 193
>pdb|1FGS|A Chain A, Folylpolyglutamate Synthetase From Lactobacillus Casei
Length = 428
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 86/158 (54%), Gaps = 4/158 (2%)
Query: 111 IHISGTKGKGSTCAYCESILRSHGFSTGFFSSPHLIEVRERIKLNGEPISYDKFTKYFWT 170
IH++GT GKGS +L + G + G ++SP ++ ERI ++ EPI
Sbjct: 42 IHVTGTNGKGSAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAF 101
Query: 171 VYNALHAKRKHAEDMPAY-FKFLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAV 229
V AL ++ D F+F+T ++++ F + + D ++EVGIGG D+TN+I T V
Sbjct: 102 VRAALERLQQQQADFNVTEFEFITALAYWYFRQRQVDVAVIEVGIGGDTDSTNVI--TPV 159
Query: 230 VGI-TSLGYDHTAVLGNTIEEITMQKAGIMKPNCIAVT 266
V + T + DH +LG+TI I KAGI+K VT
Sbjct: 160 VSVLTEVALDHQKLLGHTITAIAKHKAGIIKRGIPVVT 197
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 86/158 (54%), Gaps = 4/158 (2%)
Query: 723 IHISGTKGKGSTCAYCESILRSHGFSTGFFSSPHLIEVRERIKLNGEPISYDKFTKYFWT 782
IH++GT GKGS +L + G + G ++SP ++ ERI ++ EPI
Sbjct: 42 IHVTGTNGKGSAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAF 101
Query: 783 VYNALHAKRKHAEDMPAY-FKFLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAV 841
V AL ++ D F+F+T ++++ F + + D ++EVGIGG D+TN+I T V
Sbjct: 102 VRAALERLQQQQADFNVTEFEFITALAYWYFRQRQVDVAVIEVGIGGDTDSTNVI--TPV 159
Query: 842 VGI-TSLGYDHTAVLGNTIEEITMQKAGIMKPNCIAVT 878
V + T + DH +LG+TI I KAGI+K VT
Sbjct: 160 VSVLTEVALDHQKLLGHTITAIAKHKAGIIKRGIPVVT 197
>pdb|2GCA|A Chain A, Apo Form Of L. Casei Fpgs
Length = 428
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 85/158 (53%), Gaps = 4/158 (2%)
Query: 111 IHISGTKGKGSTCAYCESILRSHGFSTGFFSSPHLIEVRERIKLNGEPISYDKFTKYFWT 170
IH++GT GKGS +L + G + G ++SP ++ ERI ++ EPI
Sbjct: 42 IHVTGTNGKGSAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAF 101
Query: 171 VYNALHAKRKHAEDMPAY-FKFLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAV 229
V AL ++ D F+F+T + ++ F + + D ++EVGIGG D+TN+I T V
Sbjct: 102 VRAALERLQQQQADFNVTEFEFITALGYWYFRQRQVDVAVIEVGIGGDTDSTNVI--TPV 159
Query: 230 VGI-TSLGYDHTAVLGNTIEEITMQKAGIMKPNCIAVT 266
V + T + DH +LG+TI I KAGI+K VT
Sbjct: 160 VSVLTEVALDHQKLLGHTITAIAKHKAGIIKRGIPVVT 197
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 85/158 (53%), Gaps = 4/158 (2%)
Query: 723 IHISGTKGKGSTCAYCESILRSHGFSTGFFSSPHLIEVRERIKLNGEPISYDKFTKYFWT 782
IH++GT GKGS +L + G + G ++SP ++ ERI ++ EPI
Sbjct: 42 IHVTGTNGKGSAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAF 101
Query: 783 VYNALHAKRKHAEDMPAY-FKFLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAV 841
V AL ++ D F+F+T + ++ F + + D ++EVGIGG D+TN+I T V
Sbjct: 102 VRAALERLQQQQADFNVTEFEFITALGYWYFRQRQVDVAVIEVGIGGDTDSTNVI--TPV 159
Query: 842 VGI-TSLGYDHTAVLGNTIEEITMQKAGIMKPNCIAVT 878
V + T + DH +LG+TI I KAGI+K VT
Sbjct: 160 VSVLTEVALDHQKLLGHTITAIAKHKAGIIKRGIPVVT 197
>pdb|1JBV|A Chain A, Fpgs-Amppcp Complex
pdb|1JBW|A Chain A, Fpgs-Amppcp-Folate Complex
Length = 428
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 85/158 (53%), Gaps = 4/158 (2%)
Query: 111 IHISGTKGKGSTCAYCESILRSHGFSTGFFSSPHLIEVRERIKLNGEPISYDKFTKYFWT 170
IH++GT GKGS +L + G + G ++SP ++ ERI ++ EPI
Sbjct: 42 IHVTGTNGKGSAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAF 101
Query: 171 VYNALHAKRKHAEDMPAY-FKFLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAV 229
V AL ++ D F+F+T ++++ F + + D ++EVGIGG D+TN+I T V
Sbjct: 102 VRAALERLQQQQADFNVTEFEFITALAYWYFRQRQVDVAVIEVGIGGDTDSTNVI--TPV 159
Query: 230 VGI-TSLGYDHTAVLGNTIEEITMQKAGIMKPNCIAVT 266
V + T + DH +LG+TI I AGI+K VT
Sbjct: 160 VSVLTEVALDHQKLLGHTITAIAKHXAGIIKRGIPVVT 197
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 85/158 (53%), Gaps = 4/158 (2%)
Query: 723 IHISGTKGKGSTCAYCESILRSHGFSTGFFSSPHLIEVRERIKLNGEPISYDKFTKYFWT 782
IH++GT GKGS +L + G + G ++SP ++ ERI ++ EPI
Sbjct: 42 IHVTGTNGKGSAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAF 101
Query: 783 VYNALHAKRKHAEDMPAY-FKFLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAV 841
V AL ++ D F+F+T ++++ F + + D ++EVGIGG D+TN+I T V
Sbjct: 102 VRAALERLQQQQADFNVTEFEFITALAYWYFRQRQVDVAVIEVGIGGDTDSTNVI--TPV 159
Query: 842 VGI-TSLGYDHTAVLGNTIEEITMQKAGIMKPNCIAVT 878
V + T + DH +LG+TI I AGI+K VT
Sbjct: 160 VSVLTEVALDHQKLLGHTITAIAKHXAGIIKRGIPVVT 197
>pdb|2GCB|A Chain A, G51sS52T DOUBLE MUTANT OF L. CASEI FPGS
Length = 428
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 85/158 (53%), Gaps = 4/158 (2%)
Query: 111 IHISGTKGKGSTCAYCESILRSHGFSTGFFSSPHLIEVRERIKLNGEPISYDKFTKYFWT 170
IH++GT GK + +L + G + G ++SP ++ ERI ++ EPI
Sbjct: 42 IHVTGTNGKSTAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAF 101
Query: 171 VYNALHAKRKHAEDMPAY-FKFLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAV 229
V AL ++ D F+F+T + ++ F + + D ++EVGIGG D+TN+I T V
Sbjct: 102 VRAALERLQQQQADFNVTEFEFITALGYWYFRQRQVDVAVIEVGIGGDTDSTNVI--TPV 159
Query: 230 VGI-TSLGYDHTAVLGNTIEEITMQKAGIMKPNCIAVT 266
V + TS+ DH +LG+TI I KAGI+K VT
Sbjct: 160 VSVLTSVALDHQKLLGHTITAIAKHKAGIIKRGIPVVT 197
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 85/158 (53%), Gaps = 4/158 (2%)
Query: 723 IHISGTKGKGSTCAYCESILRSHGFSTGFFSSPHLIEVRERIKLNGEPISYDKFTKYFWT 782
IH++GT GK + +L + G + G ++SP ++ ERI ++ EPI
Sbjct: 42 IHVTGTNGKSTAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAF 101
Query: 783 VYNALHAKRKHAEDMPAY-FKFLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAV 841
V AL ++ D F+F+T + ++ F + + D ++EVGIGG D+TN+I T V
Sbjct: 102 VRAALERLQQQQADFNVTEFEFITALGYWYFRQRQVDVAVIEVGIGGDTDSTNVI--TPV 159
Query: 842 VGI-TSLGYDHTAVLGNTIEEITMQKAGIMKPNCIAVT 878
V + TS+ DH +LG+TI I KAGI+K VT
Sbjct: 160 VSVLTSVALDHQKLLGHTITAIAKHKAGIIKRGIPVVT 197
>pdb|2GC6|A Chain A, S73a Mutant Of L. Casei Fpgs
Length = 428
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 84/158 (53%), Gaps = 4/158 (2%)
Query: 111 IHISGTKGKGSTCAYCESILRSHGFSTGFFSSPHLIEVRERIKLNGEPISYDKFTKYFWT 170
IH++GT GKGS +L + G + G +++P ++ ERI ++ EPI
Sbjct: 42 IHVTGTNGKGSAANAIAHVLEASGLTVGLYTAPFIMRFNERIMIDHEPIPDAALVNAVAF 101
Query: 171 VYNALHAKRKHAEDMPAY-FKFLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAV 229
V AL ++ D F+F+T + ++ F + + D ++EVGIGG D+TN+I T V
Sbjct: 102 VRAALERLQQQQADFNVTEFEFITALGYWYFRQRQVDVAVIEVGIGGDTDSTNVI--TPV 159
Query: 230 VGI-TSLGYDHTAVLGNTIEEITMQKAGIMKPNCIAVT 266
V + T + DH +LG+TI I AGI+K VT
Sbjct: 160 VSVLTEVALDHQKLLGHTITAIAKHXAGIIKRGIPVVT 197
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 84/158 (53%), Gaps = 4/158 (2%)
Query: 723 IHISGTKGKGSTCAYCESILRSHGFSTGFFSSPHLIEVRERIKLNGEPISYDKFTKYFWT 782
IH++GT GKGS +L + G + G +++P ++ ERI ++ EPI
Sbjct: 42 IHVTGTNGKGSAANAIAHVLEASGLTVGLYTAPFIMRFNERIMIDHEPIPDAALVNAVAF 101
Query: 783 VYNALHAKRKHAEDMPAY-FKFLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAV 841
V AL ++ D F+F+T + ++ F + + D ++EVGIGG D+TN+I T V
Sbjct: 102 VRAALERLQQQQADFNVTEFEFITALGYWYFRQRQVDVAVIEVGIGGDTDSTNVI--TPV 159
Query: 842 VGI-TSLGYDHTAVLGNTIEEITMQKAGIMKPNCIAVT 878
V + T + DH +LG+TI I AGI+K VT
Sbjct: 160 VSVLTEVALDHQKLLGHTITAIAKHXAGIIKRGIPVVT 197
>pdb|2GC5|A Chain A, G51s Mutant Of L. Casei Fpgs
Length = 428
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 4/158 (2%)
Query: 111 IHISGTKGKGSTCAYCESILRSHGFSTGFFSSPHLIEVRERIKLNGEPISYDKFTKYFWT 170
IH++GT GK S +L + G + G ++SP ++ ERI ++ EPI
Sbjct: 42 IHVTGTNGKSSAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAF 101
Query: 171 VYNALHAKRKHAEDMPAY-FKFLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAV 229
V AL ++ D F+F+T + ++ F + + D ++EVGIGG D+TN+I T V
Sbjct: 102 VRAALERLQQQQADFNVTEFEFITALGYWYFRQRQVDVAVIEVGIGGDTDSTNVI--TPV 159
Query: 230 VGI-TSLGYDHTAVLGNTIEEITMQKAGIMKPNCIAVT 266
V + T + DH +LG+TI I AGI+K VT
Sbjct: 160 VSVLTEVALDHQKLLGHTITAIAKHXAGIIKRGIPVVT 197
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 4/158 (2%)
Query: 723 IHISGTKGKGSTCAYCESILRSHGFSTGFFSSPHLIEVRERIKLNGEPISYDKFTKYFWT 782
IH++GT GK S +L + G + G ++SP ++ ERI ++ EPI
Sbjct: 42 IHVTGTNGKSSAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAF 101
Query: 783 VYNALHAKRKHAEDMPAY-FKFLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAV 841
V AL ++ D F+F+T + ++ F + + D ++EVGIGG D+TN+I T V
Sbjct: 102 VRAALERLQQQQADFNVTEFEFITALGYWYFRQRQVDVAVIEVGIGGDTDSTNVI--TPV 159
Query: 842 VGI-TSLGYDHTAVLGNTIEEITMQKAGIMKPNCIAVT 878
V + T + DH +LG+TI I AGI+K VT
Sbjct: 160 VSVLTEVALDHQKLLGHTITAIAKHXAGIIKRGIPVVT 197
>pdb|2VOR|A Chain A, Crystal Structures Of Mycobacterium Tuberculosis
Folylpolyglutamate Synthase Complexed With Adp And
Amppcp
Length = 487
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 111 IHISGTKGKGSTCAYCESILRSHGFSTGFFSSPHLIEVRERIKLNGEPISYDKFTKYFWT 170
IHI+GT GK S ++++ + TG +SPHL ERI ++G+PIS ++ +
Sbjct: 67 IHIAGTNGKTSVARMVDALVTALHRRTGRTTSPHLQSPVERISIDGKPISPAQYVATYRE 126
Query: 171 V--YNALHAKRKHA---EDMPAYFKF--LTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNI 223
+ AL ++ A + PA KF LT M+F F D ++EVG+GGR+D TN+
Sbjct: 127 IEPLVALIDQQSQASAGKGGPAMSKFEVLTAMAFAAFADAPVDVAVVEVGMGGRWDATNV 186
Query: 224 IPNTAVVGITSLGYDHTAVLGNTIEEITMQKAGIM------KPNCIAVTSANQRGPCKQI 277
I N V IT + DH LG I I +KAGI+ P+ +AV + +
Sbjct: 187 I-NAPVAVITPISIDHVDYLGADIAGIAGEKAGIITRAPDGSPDTVAVIGRQVPKVMEVL 245
Query: 278 LLETSRALNCVLLE 291
L E+ RA V E
Sbjct: 246 LAESVRADASVARE 259
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 723 IHISGTKGKGSTCAYCESILRSHGFSTGFFSSPHLIEVRERIKLNGEPISYDKFTKYFWT 782
IHI+GT GK S ++++ + TG +SPHL ERI ++G+PIS ++ +
Sbjct: 67 IHIAGTNGKTSVARMVDALVTALHRRTGRTTSPHLQSPVERISIDGKPISPAQYVATYRE 126
Query: 783 V--YNALHAKRKHA---EDMPAYFKF--LTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNI 835
+ AL ++ A + PA KF LT M+F F D ++EVG+GGR+D TN+
Sbjct: 127 IEPLVALIDQQSQASAGKGGPAMSKFEVLTAMAFAAFADAPVDVAVVEVGMGGRWDATNV 186
Query: 836 IPNTAVVGITSLGYDHTAVLGNTIEEITMQKAGIM------KPNCIAVTSANQRGPCKQI 889
I N V IT + DH LG I I +KAGI+ P+ +AV + +
Sbjct: 187 I-NAPVAVITPISIDHVDYLGADIAGIAGEKAGIITRAPDGSPDTVAVIGRQVPKVMEVL 245
Query: 890 LLETSRALNCVLLE 903
L E+ RA V E
Sbjct: 246 LAESVRADASVARE 259
>pdb|2VOS|A Chain A, Mycobacterium Tuberculosis Folylpolyglutamate Synthase
Complexed With Adp
Length = 487
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 96/194 (49%), Gaps = 14/194 (7%)
Query: 111 IHISGTKGKGSTCAYCESILRSHGFSTGFFSSPHLIEVRERIKLNGEPISYDKFTKYFWT 170
IHI+GT GK S ++++ + TG +SPHL ERI ++G+PIS ++ +
Sbjct: 67 IHIAGTNGKTSVARXVDALVTALHRRTGRTTSPHLQSPVERISIDGKPISPAQYVATYRE 126
Query: 171 V--YNALHAKRKHA---EDMPAYFKF--LTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNI 223
+ AL ++ A + PA KF LT +F F D ++EVG GGR+D TN+
Sbjct: 127 IEPLVALIDQQSQASAGKGGPAXSKFEVLTAXAFAAFADAPVDVAVVEVGXGGRWDATNV 186
Query: 224 IPNTAVVGITSLGYDHTAVLGNTIEEITMQKAGIM------KPNCIAVTSANQRGPCKQI 277
I N V IT + DH LG I I +KAGI+ P+ +AV + +
Sbjct: 187 I-NAPVAVITPISIDHVDYLGADIAGIAGEKAGIITRAPDGSPDTVAVIGRQVPKVXEVL 245
Query: 278 LLETSRALNCVLLE 291
L E+ RA V E
Sbjct: 246 LAESVRADASVARE 259
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 96/194 (49%), Gaps = 14/194 (7%)
Query: 723 IHISGTKGKGSTCAYCESILRSHGFSTGFFSSPHLIEVRERIKLNGEPISYDKFTKYFWT 782
IHI+GT GK S ++++ + TG +SPHL ERI ++G+PIS ++ +
Sbjct: 67 IHIAGTNGKTSVARXVDALVTALHRRTGRTTSPHLQSPVERISIDGKPISPAQYVATYRE 126
Query: 783 V--YNALHAKRKHA---EDMPAYFKF--LTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNI 835
+ AL ++ A + PA KF LT +F F D ++EVG GGR+D TN+
Sbjct: 127 IEPLVALIDQQSQASAGKGGPAXSKFEVLTAXAFAAFADAPVDVAVVEVGXGGRWDATNV 186
Query: 836 IPNTAVVGITSLGYDHTAVLGNTIEEITMQKAGIM------KPNCIAVTSANQRGPCKQI 889
I N V IT + DH LG I I +KAGI+ P+ +AV + +
Sbjct: 187 I-NAPVAVITPISIDHVDYLGADIAGIAGEKAGIITRAPDGSPDTVAVIGRQVPKVXEVL 245
Query: 890 LLETSRALNCVLLE 903
L E+ RA V E
Sbjct: 246 LAESVRADASVARE 259
>pdb|1PWX|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With Bromide
pdb|1PWX|B Chain B, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With Bromide
pdb|1PWX|C Chain C, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With Bromide
pdb|1PWX|D Chain D, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With Bromide
pdb|1PWZ|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With (R)-Styrene Oxide And Chloride
pdb|1PWZ|B Chain B, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With (R)-Styrene Oxide And Chloride
pdb|1PX0|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With The Haloalcohol Mimic (R)-1-Para-Nitro-
Phenyl-2-Azido-Ethanol
pdb|1PX0|B Chain B, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With The Haloalcohol Mimic (R)-1-Para-Nitro-
Phenyl-2-Azido-Ethanol
pdb|1PX0|C Chain C, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With The Haloalcohol Mimic (R)-1-Para-Nitro-
Phenyl-2-Azido-Ethanol
pdb|1PX0|D Chain D, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With The Haloalcohol Mimic (R)-1-Para-Nitro-
Phenyl-2-Azido-Ethanol
pdb|1ZMT|A Chain A, Structure Of Haloalcohol Dehalogenase Hhec Of Agrobacterium
Radiobacter Ad1 In Complex With (R)-Para-Nitro Styrene
Oxide, With A Water Molecule In The Halide-Binding Site
pdb|1ZMT|B Chain B, Structure Of Haloalcohol Dehalogenase Hhec Of Agrobacterium
Radiobacter Ad1 In Complex With (R)-Para-Nitro Styrene
Oxide, With A Water Molecule In The Halide-Binding Site
pdb|1ZMT|C Chain C, Structure Of Haloalcohol Dehalogenase Hhec Of Agrobacterium
Radiobacter Ad1 In Complex With (R)-Para-Nitro Styrene
Oxide, With A Water Molecule In The Halide-Binding Site
pdb|1ZMT|D Chain D, Structure Of Haloalcohol Dehalogenase Hhec Of Agrobacterium
Radiobacter Ad1 In Complex With (R)-Para-Nitro Styrene
Oxide, With A Water Molecule In The Halide-Binding Site
pdb|1ZO8|A Chain A, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|B Chain B, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|C Chain C, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|D Chain D, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|E Chain E, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|F Chain F, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|G Chain G, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|H Chain H, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|I Chain I, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|J Chain J, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|K Chain K, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|L Chain L, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|M Chain M, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|N Chain N, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|O Chain O, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|P Chain P, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
Length = 254
Score = 30.8 bits (68), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 1090 ERDPTKLLSPLLQSNQFEYILVTPNILTNEIRWRGQPLD----EDWKSTVQSINI-SLAI 1144
E++P +L+ + + +LV+ +I E QP+D ED++ V+++ I A+
Sbjct: 56 EQEPAELIEAVTSAYGQVDVLVSNDIFAPEF----QPIDKYAVEDYRGAVEALQIRPFAL 111
Query: 1145 QLAYLWMFRMNKSAELKRNQSSLPMGPHFEIDPKTYRGIKAC 1186
A + KS + S+ P GP E+ T AC
Sbjct: 112 VNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGAC 153
>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase
(Apo Form) From Fungus Cochliobolus Lunatus
pdb|3QWF|A Chain A, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|B Chain B, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|C Chain C, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|D Chain D, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|E Chain E, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|F Chain F, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|G Chain G, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|H Chain H, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWI|A Chain A, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|B Chain B, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|C Chain C, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|D Chain D, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWH|A Chain A, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|B Chain B, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|C Chain C, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|D Chain D, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
Length = 270
Score = 30.4 bits (67), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 635 LVTGSLHLVGAFLNVLITPHASRSNKEIPQSYVDAIKQLNTLQSNIRTIRESKLRKDPVE 694
LVTGS +GA + V H R ++ +Y ++ K + S I+ + +
Sbjct: 22 LVTGSGRGIGAAVAV----HLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADI 77
Query: 695 MQAVQV----DQVVQYLGHLNITLDDIKKLNVIHI 725
Q ++ DQ V + GHL+I + + ++ H+
Sbjct: 78 RQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHL 112
>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid
Dehydrogenase (Y167f Mutated Form) From Fungus
Cochliobolus Lunatus
Length = 270
Score = 30.0 bits (66), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 635 LVTGSLHLVGAFLNVLITPHASRSNKEIPQSYVDAIKQLNTLQSNIRTIRESKLRKDPVE 694
LVTGS +GA + V H R ++ +Y ++ K + S I+ + +
Sbjct: 22 LVTGSGRGIGAAVAV----HLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADI 77
Query: 695 MQAVQV----DQVVQYLGHLNITLDDIKKLNVIHI 725
Q ++ DQ V + GHL+I + + ++ H+
Sbjct: 78 RQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHL 112
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,637,965
Number of Sequences: 62578
Number of extensions: 1516596
Number of successful extensions: 3420
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3352
Number of HSP's gapped (non-prelim): 31
length of query: 1255
length of database: 14,973,337
effective HSP length: 110
effective length of query: 1145
effective length of database: 8,089,757
effective search space: 9262771765
effective search space used: 9262771765
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)