BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15437
(143 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242007292|ref|XP_002424475.1| Insulin gene enhancer protein ISL-2, putative [Pediculus humanus
corporis]
gi|212507893|gb|EEB11737.1| Insulin gene enhancer protein ISL-2, putative [Pediculus humanus
corporis]
Length = 396
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/138 (81%), Positives = 125/138 (90%), Gaps = 2/138 (1%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KKCLGCSE++ DELVMK LD+VFH++CF+CVVCG RLQRG+QFVIKQGQLFCRPDY
Sbjct: 61 LYAKKCLGCSERISADELVMKALDSVFHLRCFICVVCGVRLQRGDQFVIKQGQLFCRPDY 120
Query: 62 EKEVEMLQGYAQG--IPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
EKEVEMLQGYAQG DL+ SS++ DGRRGPKRPRTILTTQQR+AFKASFE+SPKPCR
Sbjct: 121 EKEVEMLQGYAQGDFTCDDLLPSSRNQDGRRGPKRPRTILTTQQRKAFKASFEVSPKPCR 180
Query: 120 KVREGLARDTGLSVRIVQ 137
KVRE LA+DTGLSVRIVQ
Sbjct: 181 KVREALAKDTGLSVRIVQ 198
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
D +M+ D +H +C +C VCG RL + +L+CR DY++
Sbjct: 16 DRYLMRVADVFYHERCLLCSVCGIRL--SHTCFTRDSKLYCRLDYDR 60
>gi|270002858|gb|EEZ99305.1| LIM homeobox transcription factor 1, beta 2 [Tribolium castaneum]
Length = 353
Score = 218 bits (555), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 103/138 (74%), Positives = 123/138 (89%), Gaps = 2/138 (1%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+VKKCL CSE++ P+ELVM+ +N+FH++CFVCVVCG RLQ+G+ +VIKQGQLFCR DY
Sbjct: 53 LFVKKCLACSERIAPEELVMRASENIFHLRCFVCVVCGIRLQKGDLYVIKQGQLFCRIDY 112
Query: 62 EKEVEMLQGYAQG--IPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
EKEVEM+QG+ G I +L+ SS++HDGRRGPKRPRTILTTQQRRAFKASFE+SPKPCR
Sbjct: 113 EKEVEMMQGFGHGEFICDELLPSSRAHDGRRGPKRPRTILTTQQRRAFKASFEVSPKPCR 172
Query: 120 KVREGLARDTGLSVRIVQ 137
KVRE LA+DTGLSVRIVQ
Sbjct: 173 KVREALAKDTGLSVRIVQ 190
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
D +++ +D +H C C CG RL +K +L+CR DY++
Sbjct: 8 DRFLLRIMDVSYHEHCVQCCACGDRLHH--TCFVKDSKLYCRLDYDR 52
>gi|189234898|ref|XP_967153.2| PREDICTED: similar to lim homeobox protein, partial [Tribolium
castaneum]
Length = 368
Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 103/138 (74%), Positives = 123/138 (89%), Gaps = 2/138 (1%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+VKKCL CSE++ P+ELVM+ +N+FH++CFVCVVCG RLQ+G+ +VIKQGQLFCR DY
Sbjct: 57 LFVKKCLACSERIAPEELVMRASENIFHLRCFVCVVCGIRLQKGDLYVIKQGQLFCRIDY 116
Query: 62 EKEVEMLQGYAQG--IPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
EKEVEM+QG+ G I +L+ SS++HDGRRGPKRPRTILTTQQRRAFKASFE+SPKPCR
Sbjct: 117 EKEVEMMQGFGHGEFICDELLPSSRAHDGRRGPKRPRTILTTQQRRAFKASFEVSPKPCR 176
Query: 120 KVREGLARDTGLSVRIVQ 137
KVRE LA+DTGLSVRIVQ
Sbjct: 177 KVREALAKDTGLSVRIVQ 194
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
D +++ +D +H C C CG RL +K +L+CR DY++
Sbjct: 12 DRFLLRIMDVSYHEHCVQCCACGDRLHH--TCFVKDSKLYCRLDYDR 56
>gi|312370934|gb|EFR19232.1| hypothetical protein AND_22855 [Anopheles darlingi]
Length = 919
Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats.
Identities = 99/133 (74%), Positives = 116/133 (87%), Gaps = 2/133 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
+CLGC EK+G DELVM+ LDNVFH++CF+CVVCG RLQ+G+Q+VIKQ QLFCRPDYEKEV
Sbjct: 47 RCLGCGEKIGADELVMRALDNVFHLKCFICVVCGVRLQKGDQYVIKQSQLFCRPDYEKEV 106
Query: 66 EMLQGYA-QGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
EM QGY+ D + ++ DGRRGPKRPRTILTTQQRRAFKASF+ISPKPCRK+REG
Sbjct: 107 EMFQGYSYDDYCCDDMFQTRI-DGRRGPKRPRTILTTQQRRAFKASFDISPKPCRKIREG 165
Query: 125 LARDTGLSVRIVQ 137
LA+DTGLS+RIVQ
Sbjct: 166 LAKDTGLSIRIVQ 178
>gi|157118342|ref|XP_001653180.1| lim homeobox protein [Aedes aegypti]
gi|108883303|gb|EAT47528.1| AAEL001380-PA [Aedes aegypti]
Length = 387
Score = 211 bits (537), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 102/134 (76%), Positives = 116/134 (86%), Gaps = 2/134 (1%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
+CLGC EK+G DELVM+ LDNVFH++CF+CVVCG RLQ+G+Q+VIKQ QLFCRPDYEKE
Sbjct: 184 NRCLGCGEKIGADELVMRALDNVFHLKCFICVVCGVRLQKGDQYVIKQSQLFCRPDYEKE 243
Query: 65 VEMLQGYA-QGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVRE 123
VEMLQGY D I ++ DGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK+RE
Sbjct: 244 VEMLQGYNYDDYCCDDIFQTR-IDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKIRE 302
Query: 124 GLARDTGLSVRIVQ 137
GLA+DTGLS+RIVQ
Sbjct: 303 GLAKDTGLSIRIVQ 316
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
D +MK +D +H +C C C RL ++ G+L+CR DYE+
Sbjct: 135 DRYIMKVVDISYHERCLQCTSCAIRLM--HSCFMRDGKLYCRFDYER 179
>gi|170032117|ref|XP_001843929.1| lim homeobox protein [Culex quinquefasciatus]
gi|167871878|gb|EDS35261.1| lim homeobox protein [Culex quinquefasciatus]
Length = 453
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 100/134 (74%), Positives = 115/134 (85%), Gaps = 2/134 (1%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
+CLGC EK+G DELVM+ LDNVFH++CF+CVVCG RLQ+G+Q+VIKQ QLFCRPDYEKE
Sbjct: 64 NRCLGCGEKIGADELVMRALDNVFHLKCFICVVCGIRLQKGDQYVIKQSQLFCRPDYEKE 123
Query: 65 VEMLQGYA-QGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVRE 123
VEM QGY D I ++ DGRRGPKRPRTILTTQQRRAFKASFE+SPKPCRK+RE
Sbjct: 124 VEMFQGYNYDDYCCDDIFQTRI-DGRRGPKRPRTILTTQQRRAFKASFEVSPKPCRKIRE 182
Query: 124 GLARDTGLSVRIVQ 137
GLA+DTGLS+RIVQ
Sbjct: 183 GLAKDTGLSIRIVQ 196
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
D +MK +D +H C C C RL ++ G+L+CR DYE+
Sbjct: 15 DRYIMKVVDISYHENCLQCTSCAIRLMHS--CFMRDGKLYCRFDYER 59
>gi|158292635|ref|XP_314022.4| AGAP005138-PA [Anopheles gambiae str. PEST]
gi|157017084|gb|EAA44525.4| AGAP005138-PA [Anopheles gambiae str. PEST]
Length = 456
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/137 (72%), Positives = 114/137 (83%), Gaps = 8/137 (5%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
+CLGC EK+G DELVM+ LDNVFH++CF+CVVCG RLQ+G+Q+VIKQ QLFCRPDYEKE
Sbjct: 208 NRCLGCGEKIGADELVMRALDNVFHLKCFICVVCGVRLQKGDQYVIKQSQLFCRPDYEKE 267
Query: 65 VEMLQGYAQGIPFDLITSSKSH----DGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
VEM QGY+ +D DGRRGPKRPRTILTTQQRRAFKASF+ISPKPCRK
Sbjct: 268 VEMFQGYS----YDDYCCDDMFQTRIDGRRGPKRPRTILTTQQRRAFKASFDISPKPCRK 323
Query: 121 VREGLARDTGLSVRIVQ 137
+REGLA+DTGLS+RIVQ
Sbjct: 324 IREGLAKDTGLSIRIVQ 340
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 10 CSEKLGP--DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C + GP D +MK +D +H +C C C RL ++ G+L+CR DYE+
Sbjct: 150 CGQCCGPICDRYIMKVVDITYHERCLQCTSCSIRLM--HSCFMRDGKLYCRFDYER 203
>gi|195376251|ref|XP_002046910.1| GJ12228 [Drosophila virilis]
gi|194154068|gb|EDW69252.1| GJ12228 [Drosophila virilis]
Length = 564
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/137 (69%), Positives = 113/137 (82%), Gaps = 4/137 (2%)
Query: 2 LYVK-KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
LY++ +CLGC K+ DELVM++ +N+FH++CF CVVCG+ L++GEQ+V+KQGQLFCR D
Sbjct: 268 LYLRNRCLGCGHKIAADELVMRSQENIFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFD 327
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
YEKEVEMLQGY DL DGRRGPKRPRTIL TQQRRAFKASFE+SPKPCRK
Sbjct: 328 YEKEVEMLQGYDY-YGDDLFPPKM--DGRRGPKRPRTILNTQQRRAFKASFEVSPKPCRK 384
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA+DTGLS+RIVQ
Sbjct: 385 VRENLAKDTGLSLRIVQ 401
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
D +M+ +DN FH C C C L + G+L+CR DYE+
Sbjct: 223 DRYIMRVVDNSFHEGCLKCTACS--LHLVHSCYARDGKLYCRIDYER 267
>gi|195126142|ref|XP_002007533.1| GI12337 [Drosophila mojavensis]
gi|193919142|gb|EDW18009.1| GI12337 [Drosophila mojavensis]
Length = 586
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/137 (69%), Positives = 113/137 (82%), Gaps = 4/137 (2%)
Query: 2 LYVK-KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
LY++ +CLGC K+ DELVM++ +N+FH++CF CVVCG+ L++GEQ+V+KQGQLFCR D
Sbjct: 284 LYLRNRCLGCGHKIAADELVMRSQENIFHLKCFACVVCGAVLKKGEQYVVKQGQLFCRFD 343
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
YEKEVEMLQGY DL DGRRGPKRPRTIL TQQRRAFKASFE+SPKPCRK
Sbjct: 344 YEKEVEMLQGYDY-YGDDLFPPKM--DGRRGPKRPRTILNTQQRRAFKASFEVSPKPCRK 400
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA+DTGLS+RIVQ
Sbjct: 401 VRENLAKDTGLSLRIVQ 417
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+ +C C + + D +M+ +DN FH C C C L + G+L+CR DYE+
Sbjct: 227 LNQCTYCCQPIC-DRYIMRVVDNSFHEGCLKCSACS--LHLVHSCYARDGKLYCRIDYER 283
>gi|195012862|ref|XP_001983762.1| GH16074 [Drosophila grimshawi]
gi|193897244|gb|EDV96110.1| GH16074 [Drosophila grimshawi]
Length = 583
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/137 (69%), Positives = 113/137 (82%), Gaps = 4/137 (2%)
Query: 2 LYVK-KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
LY++ +CLGC K+ DELVM++ +N+FH++CF CVVCG+ L++GEQ+V+KQGQLFCR D
Sbjct: 290 LYLRNRCLGCGHKIAGDELVMRSQENIFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFD 349
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
YEKEVEMLQGY DL DGRRGPKRPRTIL TQQRRAFKASFE+SPKPCRK
Sbjct: 350 YEKEVEMLQGY-DFYGDDLFPPKM--DGRRGPKRPRTILNTQQRRAFKASFEVSPKPCRK 406
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA+DTGLS+RIVQ
Sbjct: 407 VRENLAKDTGLSLRIVQ 423
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
D +M+ +D+ FH C C C L + G+L+CR DYE+
Sbjct: 245 DRYIMRVVDSSFHEGCLKCTACAQHLVHS--CYARDGKLYCRLDYER 289
>gi|195440768|ref|XP_002068212.1| GK12807 [Drosophila willistoni]
gi|194164297|gb|EDW79198.1| GK12807 [Drosophila willistoni]
Length = 554
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/137 (70%), Positives = 113/137 (82%), Gaps = 4/137 (2%)
Query: 2 LYVK-KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
LY++ +CLGC K+ DELVM+ +NVFH++CF CVVCGS L++GEQ+V+KQGQLFCR D
Sbjct: 262 LYIRNRCLGCGHKIAHDELVMRCHENVFHLKCFACVVCGSLLKKGEQYVVKQGQLFCRFD 321
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
YEKEVEMLQGY D I K DGRRGPKRPRTIL TQQRRAFKASFE+SPKPCRK
Sbjct: 322 YEKEVEMLQGY--DFYSDDIFPPK-MDGRRGPKRPRTILNTQQRRAFKASFEVSPKPCRK 378
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA++TGLS+RIVQ
Sbjct: 379 VRENLAKETGLSLRIVQ 395
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
D +M+ +DN FH C C C L K G+LFCR DYE+
Sbjct: 217 DRYIMRVVDNSFHESCLKCTACS--LHLVHSCYAKDGKLFCRIDYER 261
>gi|195589788|ref|XP_002084631.1| GD12730 [Drosophila simulans]
gi|194196640|gb|EDX10216.1| GD12730 [Drosophila simulans]
Length = 527
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 112/137 (81%), Gaps = 4/137 (2%)
Query: 2 LYVKK-CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
LY++ CLGC K+ DELVM+ +NVFH++CF CVVCG+ L++GEQ+V+KQGQLFCR D
Sbjct: 236 LYIRNHCLGCGLKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFD 295
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
YEKEVEMLQGY D + K DGRRGPKRPRTIL TQQRRAFKASFE+SPKPCRK
Sbjct: 296 YEKEVEMLQGY--DFYGDELFPPKL-DGRRGPKRPRTILNTQQRRAFKASFEVSPKPCRK 352
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA+DTGLS+RIVQ
Sbjct: 353 VRENLAKDTGLSLRIVQ 369
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+ +C C + + D +M+ ++N FH C C C L ++G+L+CR DYE+
Sbjct: 179 LSQCAHCCQPIC-DRYIMRVVENSFHEGCLKCTACS--LHLVHSCYAREGKLYCRVDYER 235
>gi|195327095|ref|XP_002030257.1| GM24666 [Drosophila sechellia]
gi|194119200|gb|EDW41243.1| GM24666 [Drosophila sechellia]
Length = 527
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 112/137 (81%), Gaps = 4/137 (2%)
Query: 2 LYVKK-CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
LY++ CLGC K+ DELVM+ +NVFH++CF CVVCG+ L++GEQ+V+KQGQLFCR D
Sbjct: 236 LYIRNHCLGCGLKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFD 295
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
YEKEVEMLQGY D + K DGRRGPKRPRTIL TQQRRAFKASFE+SPKPCRK
Sbjct: 296 YEKEVEMLQGY--DFYGDELFPPKL-DGRRGPKRPRTILNTQQRRAFKASFEVSPKPCRK 352
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA+DTGLS+RIVQ
Sbjct: 353 VRENLAKDTGLSLRIVQ 369
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+ +C C + + D +M+ ++N FH C C C L ++G+L+CR DYE+
Sbjct: 179 LSQCAHCCQPIC-DRYIMRVVENSFHEGCLKCTACS--LHLVHSCYAREGKLYCRVDYER 235
>gi|281366134|ref|NP_648567.2| CG4328 [Drosophila melanogaster]
gi|211938623|gb|ACJ13208.1| FI06571p [Drosophila melanogaster]
gi|272455176|gb|AAF49932.2| CG4328 [Drosophila melanogaster]
Length = 544
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 112/137 (81%), Gaps = 4/137 (2%)
Query: 2 LYVKK-CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
LY++ CLGC K+ DELVM+ +NVFH++CF CVVCG+ L++GEQ+V+KQGQLFCR D
Sbjct: 253 LYIRNHCLGCGLKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFD 312
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
YEKEVEMLQGY D + K DGRRGPKRPRTIL TQQRRAFKASFE+SPKPCRK
Sbjct: 313 YEKEVEMLQGY--DFYGDELFPPKL-DGRRGPKRPRTILNTQQRRAFKASFEVSPKPCRK 369
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA+DTGLS+RIVQ
Sbjct: 370 VRENLAKDTGLSLRIVQ 386
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+ +C C + + D +M+ ++N FH C C C L ++G+L+CR DYE+
Sbjct: 196 LSQCAHCCQPIC-DRYIMRVVENSFHEGCLKCTACS--LHLVHSCYAREGKLYCRVDYER 252
>gi|195493804|ref|XP_002094570.1| GE20130 [Drosophila yakuba]
gi|194180671|gb|EDW94282.1| GE20130 [Drosophila yakuba]
Length = 540
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 112/137 (81%), Gaps = 4/137 (2%)
Query: 2 LYVKK-CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
LY++ CLGC K+ DELVM+ +NVFH++CF CVVCG+ L++GEQ+V+KQGQLFCR D
Sbjct: 249 LYIRNHCLGCGLKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFD 308
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
YEKEVEMLQGY D + K DGRRGPKRPRTIL TQQRRAFKASFE+SPKPCRK
Sbjct: 309 YEKEVEMLQGY--DFYGDELFPPKL-DGRRGPKRPRTILNTQQRRAFKASFEVSPKPCRK 365
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA+DTGLS+RIVQ
Sbjct: 366 VRENLAKDTGLSLRIVQ 382
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+ +C C + + D +M+ ++N FH C C C L ++G+L+CR DYE+
Sbjct: 192 LSQCAHCCQPIC-DRYIMRVVENSFHEGCLKCTACS--LHLVHSCYAREGKLYCRVDYER 248
>gi|194869786|ref|XP_001972521.1| GG13839 [Drosophila erecta]
gi|190654304|gb|EDV51547.1| GG13839 [Drosophila erecta]
Length = 531
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 112/137 (81%), Gaps = 4/137 (2%)
Query: 2 LYVKK-CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
LY++ CLGC K+ DELVM+ +NVFH++CF CVVCG+ L++GEQ+V+KQGQLFCR D
Sbjct: 240 LYIRNHCLGCGLKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFD 299
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
YEKEVEMLQGY D + K DGRRGPKRPRTIL TQQRRAFKASFE+SPKPCRK
Sbjct: 300 YEKEVEMLQGY--DFYGDELFPPKL-DGRRGPKRPRTILNTQQRRAFKASFEVSPKPCRK 356
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA+DTGLS+RIVQ
Sbjct: 357 VRENLAKDTGLSLRIVQ 373
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+ +C C + + D +M+ ++N FH C C C L ++G+L+CR DYE+
Sbjct: 183 LSQCAHCCQPIC-DRYIMRVVENSFHEGCLKCTACS--LHLVHSCYAREGKLYCRVDYER 239
>gi|145587040|gb|ABP87885.1| IP01439p [Drosophila melanogaster]
Length = 467
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 112/137 (81%), Gaps = 4/137 (2%)
Query: 2 LYVKK-CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
LY++ CLGC K+ DELVM+ +NVFH++CF CVVCG+ L++GEQ+V+KQGQLFCR D
Sbjct: 176 LYIRNHCLGCGLKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFD 235
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
YEKEVEMLQGY D + K DGRRGPKRPRTIL TQQRRAFKASFE+SPKPCRK
Sbjct: 236 YEKEVEMLQGY--DFYGDELFPPKL-DGRRGPKRPRTILNTQQRRAFKASFEVSPKPCRK 292
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA+DTGLS+RIVQ
Sbjct: 293 VRENLAKDTGLSLRIVQ 309
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+ +C C + + D +M+ ++N FH C C C L ++G+L+CR DYE+
Sbjct: 119 LSQCAHCCQPIC-DRYIMRVVENSFHEGCLKCTACS--LHLVHSCYAREGKLYCRVDYER 175
>gi|195160501|ref|XP_002021114.1| GL25001 [Drosophila persimilis]
gi|194118227|gb|EDW40270.1| GL25001 [Drosophila persimilis]
Length = 458
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/137 (68%), Positives = 112/137 (81%), Gaps = 4/137 (2%)
Query: 2 LYVK-KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
LY++ +CLGC K+ DELVM+ +NVFH++CF CVVCG+ L++GEQ+V+KQGQLFCR D
Sbjct: 265 LYIRNRCLGCGHKVAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFD 324
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
YEKEVEMLQGY DL DGRRGPKRPRTIL TQQRR+FKASFE+SPKPCRK
Sbjct: 325 YEKEVEMLQGYDY-YGDDLFPPKL--DGRRGPKRPRTILNTQQRRSFKASFEVSPKPCRK 381
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA++TGLS+RIVQ
Sbjct: 382 VRENLAKETGLSLRIVQ 398
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+ C C + D +M+ +DN FH C C C L ++G+L+CR DYE+
Sbjct: 208 MNNCAHCCRPIS-DRYIMRVVDNSFHEGCLKCTACS--LHLVHSCYAREGKLYCRIDYER 264
>gi|198464778|ref|XP_001353365.2| GA18112 [Drosophila pseudoobscura pseudoobscura]
gi|198149875|gb|EAL30872.2| GA18112 [Drosophila pseudoobscura pseudoobscura]
Length = 553
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/137 (68%), Positives = 112/137 (81%), Gaps = 4/137 (2%)
Query: 2 LYVK-KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
LY++ +CLGC K+ DELVM+ +NVFH++CF CVVCG+ L++GEQ+V+KQGQLFCR D
Sbjct: 263 LYIRNRCLGCGHKVAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFD 322
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
YEKEVEMLQGY DL DGRRGPKRPRTIL TQQRR+FKASFE+SPKPCRK
Sbjct: 323 YEKEVEMLQGYDY-YGDDLFPPKL--DGRRGPKRPRTILNTQQRRSFKASFEVSPKPCRK 379
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA++TGLS+RIVQ
Sbjct: 380 VRENLAKETGLSLRIVQ 396
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+ C C + D +M+ +DN FH C C C L ++G+L+CR DYE+
Sbjct: 206 MNNCAHCCRPIS-DRYIMRVVDNSFHEGCLKCTACSLHLVHS--CYAREGKLYCRIDYER 262
>gi|194747131|ref|XP_001956006.1| GF24989 [Drosophila ananassae]
gi|190623288|gb|EDV38812.1| GF24989 [Drosophila ananassae]
Length = 554
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/137 (69%), Positives = 112/137 (81%), Gaps = 4/137 (2%)
Query: 2 LYVK-KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
LY++ +CLGC K+ DELVM+ +NVFH++CF CVVCG L++GEQ+V+KQGQLFCR D
Sbjct: 261 LYIRNRCLGCGHKIASDELVMRCHENVFHLKCFACVVCGVLLKKGEQYVVKQGQLFCRFD 320
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
YEKEVEMLQGY D + K DGRRGPKRPRTIL TQQRRAFKASFE+SPKPCRK
Sbjct: 321 YEKEVEMLQGY--DFYGDELFPPKL-DGRRGPKRPRTILNTQQRRAFKASFEVSPKPCRK 377
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA++TGLS+RIVQ
Sbjct: 378 VRENLAKETGLSLRIVQ 394
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
D +M+ ++N FH C C C L ++G+L+CR DYE+
Sbjct: 216 DRYIMRVVENSFHEGCLKCTACSLHLVHS--CFAREGKLYCRIDYER 260
>gi|328723694|ref|XP_001946328.2| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Acyrthosiphon pisum]
Length = 415
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/133 (67%), Positives = 101/133 (75%), Gaps = 3/133 (2%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
+ C C + + ELVM+ + VFH QCFVCVVCG RL G+Q+VIK QLFCRPDYEKE
Sbjct: 96 RSCGSCGDHIAAGELVMRAGECVFHEQCFVCVVCGIRLCTGDQYVIKHSQLFCRPDYEKE 155
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
V M++ D S +HDGRRGPKRPRTILTTQQRRAFKASFE+SPKPCRKVREG
Sbjct: 156 VNMMRDEINRNTGDW---SYNHDGRRGPKRPRTILTTQQRRAFKASFELSPKPCRKVREG 212
Query: 125 LARDTGLSVRIVQ 137
LA DTGLSVRIVQ
Sbjct: 213 LAHDTGLSVRIVQ 225
>gi|242007294|ref|XP_002424476.1| Homeobox protein ceh-14, putative [Pediculus humanus corporis]
gi|212507894|gb|EEB11738.1| Homeobox protein ceh-14, putative [Pediculus humanus corporis]
Length = 389
Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 83/132 (62%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C +++ P ELVM+ VFH+QCF C+ CG LQ+GEQFV+K GQLFCRPD+EKE+
Sbjct: 87 KCSRCGDRILPHELVMRAQHLVFHLQCFCCIACGQHLQKGEQFVLKAGQLFCRPDFEKEI 146
Query: 66 EMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGL 125
+L G DL + DGRRGPKRPRTILT+ QRR FKASFE+SPKPCRKVRE L
Sbjct: 147 YLLHS-PTGEDLDLDDGIRHRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKVREAL 205
Query: 126 ARDTGLSVRIVQ 137
A++TGLSVR+VQ
Sbjct: 206 AKETGLSVRVVQ 217
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC +K+ D +M+ D +H C C VCG L + G+L+C+ DY++
Sbjct: 29 CEGCGQKI-HDRYLMRVGDTSWHEHCLSCNVCGVLLSHS--CYTRSGKLYCKQDYDR 82
>gi|241811703|ref|XP_002416452.1| lim homeobox protein, putative [Ixodes scapularis]
gi|215510916|gb|EEC20369.1| lim homeobox protein, putative [Ixodes scapularis]
Length = 155
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/137 (63%), Positives = 105/137 (76%), Gaps = 7/137 (5%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC + P ELVM+ L++VFHV CF CVVCG LQ+G+QFV++ G+L+CRPD+
Sbjct: 1 LFGVKCAGCLGSIAPSELVMRALEHVFHVACFACVVCGRTLQKGDQFVVRSGRLYCRPDF 60
Query: 62 EKEVEMLQGYAQ-GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
EKE+ ++ G Q G P + DGRRGPKRPRTILTT QRRAFKASFEIS KPCRK
Sbjct: 61 EKEMALVPGAGQNGQP------AVRPDGRRGPKRPRTILTTAQRRAFKASFEISQKPCRK 114
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA++TGLSVRIVQ
Sbjct: 115 VRETLAKETGLSVRIVQ 131
>gi|270002859|gb|EEZ99306.1| LIM homeobox transcription factor 1, beta [Tribolium castaneum]
Length = 388
Score = 171 bits (433), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 82/132 (62%), Positives = 103/132 (78%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++L P E+VM+ +VFH+ CFVCVVC LQ+GEQFV++ GQLFCR D+EKE+
Sbjct: 102 KCSRCGDRLLPHEMVMRAQQHVFHLPCFVCVVCCQPLQKGEQFVLRAGQLFCRQDFEKEM 161
Query: 66 EMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGL 125
++Q + G L +S+ DGRRGPKRPRTILT+ QRR FKASFE+SPKPCRKVRE L
Sbjct: 162 YLMQQASSGDDDMLDENSRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKVREAL 221
Query: 126 ARDTGLSVRIVQ 137
A++TGLSVR+VQ
Sbjct: 222 AKETGLSVRVVQ 233
>gi|66571156|gb|AAY51543.1| IP01440p [Drosophila melanogaster]
Length = 272
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/117 (72%), Positives = 98/117 (83%), Gaps = 3/117 (2%)
Query: 21 MKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVEMLQGYAQGIPFDLI 80
M+ +NVFH++CF CVVCG+ L++GEQ+V+KQGQLFCR DYEKEVEMLQGY D +
Sbjct: 1 MRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFDYEKEVEMLQGY--DFYGDEL 58
Query: 81 TSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
K DGRRGPKRPRTIL TQQRRAFKASFE+SPKPCRKVRE LA+DTGLS+RIVQ
Sbjct: 59 FPPK-LDGRRGPKRPRTILNTQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRIVQ 114
>gi|91077954|ref|XP_967240.1| PREDICTED: similar to CG32105 CG32105-PB [Tribolium castaneum]
Length = 472
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 105/136 (77%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
++ KC C ++L P E+VM+ +VFH+ CFVCVVC LQ+GEQFV++ GQLFCR D+
Sbjct: 182 IFGVKCSRCGDRLLPHEMVMRAQQHVFHLPCFVCVVCCQPLQKGEQFVLRAGQLFCRQDF 241
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
EKE+ ++Q + G L +S+ DGRRGPKRPRTILT+ QRR FKASFE+SPKPCRKV
Sbjct: 242 EKEMYLMQQASSGDDDMLDENSRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKV 301
Query: 122 REGLARDTGLSVRIVQ 137
RE LA++TGLSVR+VQ
Sbjct: 302 REALAKETGLSVRVVQ 317
>gi|357612982|gb|EHJ68260.1| hypothetical protein KGM_10626 [Danaus plexippus]
Length = 327
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 103/136 (75%), Gaps = 2/136 (1%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C ++L P E+VM+ VFH+QCFVCV+C LQ+GEQ+VI+ GQ+FCR D+
Sbjct: 42 LFGVKCTRCGDRLLPQEMVMRAQQYVFHIQCFVCVMCCQPLQKGEQYVIRAGQIFCRQDF 101
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
EKE+ ++Q + D S + DGRRGPKRPRTILT+ QRR FKASFE+SPKPCRKV
Sbjct: 102 EKEMYLMQHAEDDMIID--DSERPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKV 159
Query: 122 REGLARDTGLSVRIVQ 137
RE LA+DTGLSVR+VQ
Sbjct: 160 REALAKDTGLSVRVVQ 175
>gi|443694945|gb|ELT95963.1| hypothetical protein CAPTEDRAFT_167213 [Capitella teleta]
Length = 352
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/141 (55%), Positives = 100/141 (70%), Gaps = 5/141 (3%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY +C C + + +ELVM+ + +VFH+QCFVCV CG +LQRG+QFV+K GQLFCR D+
Sbjct: 69 LYAARCSACVQTVPSNELVMRAVGHVFHLQCFVCVACGHQLQRGDQFVVKDGQLFCRADF 128
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPK 116
E+E M GY+ + D ++GPKRPRTILTT QRR FKASFE++PK
Sbjct: 129 EREFLMQHPDWCSGYSTKSDEESSIDENDADNQKGPKRPRTILTTSQRRKFKASFEVNPK 188
Query: 117 PCRKVREGLARDTGLSVRIVQ 137
PCRK+RE LA +TGLSVR+VQ
Sbjct: 189 PCRKIRESLASETGLSVRVVQ 209
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC + D +++ + N +H +C C C + L R +K G+L C+ DY++
Sbjct: 15 CCGCGLTI-EDRYLLRVMGNSWHERCLQCDFCRAPLTRS--CFVKNGRLLCKLDYDR 68
>gi|391346181|ref|XP_003747357.1| PREDICTED: LIM homeobox transcription factor 1-beta.1-like
[Metaseiulus occidentalis]
Length = 434
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/147 (55%), Positives = 103/147 (70%), Gaps = 11/147 (7%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C+ + P ELVMK LD V+H+ CF+C CG +LQRG+++V++ G+L+CR D+
Sbjct: 113 LFGAKCAACTGSIAPAELVMKALDQVYHLSCFLCCTCGRQLQRGDEYVLRNGRLYCRQDF 172
Query: 62 EKEVEMLQGYAQGIPFDLIT-----------SSKSHDGRRGPKRPRTILTTQQRRAFKAS 110
EKE+ +LQ G + + + DGRRGPKRPRTILTT QRRAFKAS
Sbjct: 173 EKEMHLLQQLRGGNGGGGVGGAGVPSVGTPGAGQRPDGRRGPKRPRTILTTAQRRAFKAS 232
Query: 111 FEISPKPCRKVREGLARDTGLSVRIVQ 137
FEIS KPCRKVRE LA++TGLSVRIVQ
Sbjct: 233 FEISQKPCRKVREALAKETGLSVRIVQ 259
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC E+ D +MK ++ +H C +C VC L ++ ++FC+ DY++
Sbjct: 59 CAGC-ERPIVDRYIMKVRESSWHESCLICSVCHQHL--ATSCYSRERRIFCKNDYDR 112
>gi|195012851|ref|XP_001983760.1| GH15398 [Drosophila grimshawi]
gi|193897242|gb|EDV96108.1| GH15398 [Drosophila grimshawi]
Length = 618
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 82/144 (56%), Positives = 100/144 (69%), Gaps = 11/144 (7%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLFC-RP 59
L+ KC C + P ELVM+ + N VFH+ CFVC C LQ+GEQF+++ GQLFC R
Sbjct: 309 LFGVKCAACCHAILPQELVMRPISNYVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYRH 368
Query: 60 DYEKEVEMLQGYAQGIPF------DLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEI 113
D EKE+ + AQ F DL+ + DGRRGPKRPRTILT+QQR+ FKASF+
Sbjct: 369 DLEKEMFLAAAAAQHCGFVGLDEEDLL---RPRDGRRGPKRPRTILTSQQRKQFKASFDQ 425
Query: 114 SPKPCRKVREGLARDTGLSVRIVQ 137
SPKPCRKVRE LA+DTGLSVR+VQ
Sbjct: 426 SPKPCRKVREALAKDTGLSVRVVQ 449
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC +K+ D +M D +H QC C CG LQ ++ +L+C+ DY++
Sbjct: 255 CEGCGQKIH-DRYLMNVGDANWHEQCLACCYCG--LQLHHTCYVRNSKLYCKQDYDR 308
>gi|326910973|ref|XP_003201838.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Meleagris gallopavo]
Length = 299
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/148 (54%), Positives = 101/148 (68%), Gaps = 13/148 (8%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C + + P EL+M+ L+NV+HV CF C C RLQRG++FV+K+GQL CR DY
Sbjct: 14 LFQTKCSSCLKAIAPSELIMRVLENVYHVHCFYCCECERRLQRGDEFVLKEGQLLCRSDY 73
Query: 62 EKEVEMLQGYA----QGIPFDLITSSKSH--------DGRRGPKRPRTILTTQQRRAFKA 109
EKE EML + + + + S SH D +R KRPRTILTTQQRRAFKA
Sbjct: 74 EKEKEMLSAISPTPTESVKSEDEDGSHSHGKGSEDSKDHKRS-KRPRTILTTQQRRAFKA 132
Query: 110 SFEISPKPCRKVREGLARDTGLSVRIVQ 137
SFE+S KPCRKVRE LA +TGL+VR+VQ
Sbjct: 133 SFEVSSKPCRKVRETLAAETGLTVRVVQ 160
>gi|442631924|ref|NP_001261754.1| CG32105, isoform C [Drosophila melanogaster]
gi|440215685|gb|AGB94447.1| CG32105, isoform C [Drosophila melanogaster]
Length = 639
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 82/144 (56%), Positives = 100/144 (69%), Gaps = 11/144 (7%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLFC-RP 59
L+ KC C + P ELVM+ + N VFH+ CFVC C LQ+GEQF+++ GQLFC R
Sbjct: 328 LFGVKCSSCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYRH 387
Query: 60 DYEKEVEMLQGYAQGIPF------DLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEI 113
D EKE+ + AQ F DL+ + DGRRGPKRPRTILT+QQR+ FKASF+
Sbjct: 388 DLEKEMFLAAAAAQHCGFVGLDEEDLL---RPRDGRRGPKRPRTILTSQQRKQFKASFDQ 444
Query: 114 SPKPCRKVREGLARDTGLSVRIVQ 137
SPKPCRKVRE LA+DTGLSVR+VQ
Sbjct: 445 SPKPCRKVREALAKDTGLSVRVVQ 468
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC +K+ D +M D +H QC C CG +L ++ +L+C+ DY++
Sbjct: 274 CEGCGQKIH-DRFLMNVGDANWHEQCLACCYCGMQLH--HTCYVRNSKLYCKMDYDR 327
>gi|195376257|ref|XP_002046913.1| GJ13148 [Drosophila virilis]
gi|194154071|gb|EDW69255.1| GJ13148 [Drosophila virilis]
Length = 588
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 82/144 (56%), Positives = 100/144 (69%), Gaps = 11/144 (7%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLFC-RP 59
L+ KC C + P ELVM+ + N VFH+ CFVC C LQ+GEQF+++ GQLFC R
Sbjct: 278 LFGVKCAACCHAILPQELVMRPIPNYVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYRH 337
Query: 60 DYEKEVEMLQGYAQGIPF------DLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEI 113
D EKE+ + AQ F DL+ + DGRRGPKRPRTILT+QQR+ FKASF+
Sbjct: 338 DLEKEMFLAAAAAQHCGFVGLDEEDLL---RPRDGRRGPKRPRTILTSQQRKQFKASFDQ 394
Query: 114 SPKPCRKVREGLARDTGLSVRIVQ 137
SPKPCRKVRE LA+DTGLSVR+VQ
Sbjct: 395 SPKPCRKVREALAKDTGLSVRVVQ 418
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC +K+ D +M D +H QC C CG +L ++ +L+C+ DY++
Sbjct: 224 CEGCGQKIH-DRYLMNVGDANWHEQCLACCYCGMQLH--HTCYVRNSKLYCKLDYDR 277
>gi|24663250|ref|NP_729801.1| CG32105, isoform B [Drosophila melanogaster]
gi|23093601|gb|AAF49930.2| CG32105, isoform B [Drosophila melanogaster]
gi|28316896|gb|AAO39470.1| RE70810p [Drosophila melanogaster]
Length = 640
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 82/144 (56%), Positives = 100/144 (69%), Gaps = 11/144 (7%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLFC-RP 59
L+ KC C + P ELVM+ + N VFH+ CFVC C LQ+GEQF+++ GQLFC R
Sbjct: 329 LFGVKCSSCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYRH 388
Query: 60 DYEKEVEMLQGYAQGIPF------DLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEI 113
D EKE+ + AQ F DL+ + DGRRGPKRPRTILT+QQR+ FKASF+
Sbjct: 389 DLEKEMFLAAAAAQHCGFVGLDEEDLL---RPRDGRRGPKRPRTILTSQQRKQFKASFDQ 445
Query: 114 SPKPCRKVREGLARDTGLSVRIVQ 137
SPKPCRKVRE LA+DTGLSVR+VQ
Sbjct: 446 SPKPCRKVREALAKDTGLSVRVVQ 469
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC +K+ D +M D +H QC C CG +L ++ +L+C+ DY++
Sbjct: 275 CEGCGQKIH-DRFLMNVGDANWHEQCLACCYCGMQLH--HTCYVRNSKLYCKMDYDR 328
>gi|195126146|ref|XP_002007535.1| GI13003 [Drosophila mojavensis]
gi|193919144|gb|EDW18011.1| GI13003 [Drosophila mojavensis]
Length = 607
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 82/144 (56%), Positives = 101/144 (70%), Gaps = 11/144 (7%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLFC-RP 59
L+ KC GC + P ELVM+ + N VFH+ CFVC C LQ+GEQF+++ GQLFC R
Sbjct: 298 LFGVKCAGCCHAILPQELVMRPIPNYVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYRH 357
Query: 60 DYEKEVEMLQGYAQGIPF------DLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEI 113
D +KE+ + AQ F DL+ + DGRRGPKRPRTILT+QQR+ FKASF+
Sbjct: 358 DLDKEMFLAAAAAQHCGFVGLDEEDLL---RPRDGRRGPKRPRTILTSQQRKQFKASFDQ 414
Query: 114 SPKPCRKVREGLARDTGLSVRIVQ 137
SPKPCRKVRE LA+DTGLSVR+VQ
Sbjct: 415 SPKPCRKVREALAKDTGLSVRVVQ 438
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC +K+ D +M D +H QC C CG +L ++ +L+C+ DY++
Sbjct: 244 CEGCGQKIH-DRYLMNVGDANWHEQCLACCYCGMQLH--HTCYVRNSKLYCKLDYDR 297
>gi|195589796|ref|XP_002084635.1| GD14373 [Drosophila simulans]
gi|194196644|gb|EDX10220.1| GD14373 [Drosophila simulans]
Length = 642
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 82/144 (56%), Positives = 100/144 (69%), Gaps = 11/144 (7%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLFC-RP 59
L+ KC C + P ELVM+ + N VFH+ CFVC C LQ+GEQF+++ GQLFC R
Sbjct: 331 LFGVKCSSCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYRH 390
Query: 60 DYEKEVEMLQGYAQGIPF------DLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEI 113
D EKE+ + AQ F DL+ + DGRRGPKRPRTILT+QQR+ FKASF+
Sbjct: 391 DLEKEMFLAAAAAQHCGFVGLDEEDLL---RPRDGRRGPKRPRTILTSQQRKQFKASFDQ 447
Query: 114 SPKPCRKVREGLARDTGLSVRIVQ 137
SPKPCRKVRE LA+DTGLSVR+VQ
Sbjct: 448 SPKPCRKVREALAKDTGLSVRVVQ 471
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC +K+ D +M D +H QC C CG +L ++ +L+C+ DY++
Sbjct: 277 CEGCGQKIH-DRFLMNVGDANWHEQCLACCYCGMQLH--HTCYVRNSKLYCKMDYDR 330
>gi|195440764|ref|XP_002068210.1| GK10148 [Drosophila willistoni]
gi|194164295|gb|EDW79196.1| GK10148 [Drosophila willistoni]
Length = 636
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 82/144 (56%), Positives = 100/144 (69%), Gaps = 11/144 (7%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLFC-RP 59
L+ KC C + P ELVM+ + N VFH+ CFVC C LQ+GEQF+++ GQLFC R
Sbjct: 324 LFGVKCAACCHAILPQELVMRPIPNYVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCFRH 383
Query: 60 DYEKEVEMLQGYAQGIPF------DLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEI 113
D EKE+ + AQ F DL+ + DGRRGPKRPRTILT+QQR+ FKASF+
Sbjct: 384 DLEKEMFLAAAAAQHCGFVGLDEEDLL---RPRDGRRGPKRPRTILTSQQRKQFKASFDQ 440
Query: 114 SPKPCRKVREGLARDTGLSVRIVQ 137
SPKPCRKVRE LA+DTGLSVR+VQ
Sbjct: 441 SPKPCRKVREALAKDTGLSVRVVQ 464
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC +K+ D +M + +H QC C CG +L ++ +L+C+ DY++
Sbjct: 270 CEGCGQKIH-DRYLMNVGEANWHEQCLACCYCGMQLH--HTCYVRNSKLYCKLDYDR 323
>gi|194747127|ref|XP_001956004.1| GF24815 [Drosophila ananassae]
gi|190623286|gb|EDV38810.1| GF24815 [Drosophila ananassae]
Length = 613
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 82/144 (56%), Positives = 100/144 (69%), Gaps = 11/144 (7%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLFC-RP 59
L+ KC C + P ELVM+ + N VFH+ CFVC C LQ+GEQF+++ GQLFC R
Sbjct: 303 LFGVKCASCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFLLRDGQLFCYRH 362
Query: 60 DYEKEVEMLQGYAQGIPF------DLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEI 113
D EKE+ + AQ F DL+ + DGRRGPKRPRTILT+QQR+ FKASF+
Sbjct: 363 DLEKEMFLAAAAAQHCGFVGLDEEDLL---RPRDGRRGPKRPRTILTSQQRKQFKASFDQ 419
Query: 114 SPKPCRKVREGLARDTGLSVRIVQ 137
SPKPCRKVRE LA+DTGLSVR+VQ
Sbjct: 420 SPKPCRKVREALAKDTGLSVRVVQ 443
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC +K+ D +M + +H QC C CG LQ ++ +L+C+ DY++
Sbjct: 249 CEGCGQKIH-DRFLMNVGEANWHEQCLACCYCG--LQLHHTCYVRNSKLYCKMDYDR 302
>gi|195327101|ref|XP_002030260.1| GM25340 [Drosophila sechellia]
gi|194119203|gb|EDW41246.1| GM25340 [Drosophila sechellia]
Length = 637
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 82/144 (56%), Positives = 100/144 (69%), Gaps = 11/144 (7%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLFC-RP 59
L+ KC C + P ELVM+ + N VFH+ CFVC C LQ+GEQF+++ GQLFC R
Sbjct: 328 LFGIKCSSCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYRH 387
Query: 60 DYEKEVEMLQGYAQGIPF------DLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEI 113
D EKE+ + AQ F DL+ + DGRRGPKRPRTILT+QQR+ FKASF+
Sbjct: 388 DLEKEMFLAAAAAQHCGFVGLDEEDLL---RPRDGRRGPKRPRTILTSQQRKQFKASFDQ 444
Query: 114 SPKPCRKVREGLARDTGLSVRIVQ 137
SPKPCRKVRE LA+DTGLSVR+VQ
Sbjct: 445 SPKPCRKVREALAKDTGLSVRVVQ 468
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC +K+ D +M D +H QC C CG +L ++ +L+C+ DY++
Sbjct: 274 CEGCGQKIH-DRFLMNVGDANWHEQCLACCYCGMQLH--HTCYVRNSKLYCKMDYDR 327
>gi|195160505|ref|XP_002021116.1| GL25169 [Drosophila persimilis]
gi|194118229|gb|EDW40272.1| GL25169 [Drosophila persimilis]
Length = 613
Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 82/144 (56%), Positives = 100/144 (69%), Gaps = 11/144 (7%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLFC-RP 59
L+ KC C + P ELVM+ + N VFH+ CFVC C LQ+GEQF+++ GQLFC R
Sbjct: 304 LFGVKCASCCHAILPQELVMRPIPNYVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYRH 363
Query: 60 DYEKEVEMLQGYAQGIPF------DLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEI 113
D EKE+ + AQ F DL+ + DGRRGPKRPRTILT+QQR+ FKASF+
Sbjct: 364 DLEKEMFLAAAAAQHCGFVGLDEEDLL---RPRDGRRGPKRPRTILTSQQRKQFKASFDQ 420
Query: 114 SPKPCRKVREGLARDTGLSVRIVQ 137
SPKPCRKVRE LA+DTGLSVR+VQ
Sbjct: 421 SPKPCRKVREALAKDTGLSVRVVQ 444
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC +K+ D +M + +H QC C CG +L ++ +L+C+ DY++
Sbjct: 250 CEGCGQKIH-DRYLMNVGEANWHEQCLACCYCGMQLH--HTCYVRSSKLYCKMDYDR 303
>gi|198464782|ref|XP_001353366.2| GA16684 [Drosophila pseudoobscura pseudoobscura]
gi|198149877|gb|EAL30873.2| GA16684 [Drosophila pseudoobscura pseudoobscura]
Length = 620
Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 82/144 (56%), Positives = 100/144 (69%), Gaps = 11/144 (7%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLFC-RP 59
L+ KC C + P ELVM+ + N VFH+ CFVC C LQ+GEQF+++ GQLFC R
Sbjct: 311 LFGVKCASCCHAILPQELVMRPIPNYVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYRH 370
Query: 60 DYEKEVEMLQGYAQGIPF------DLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEI 113
D EKE+ + AQ F DL+ + DGRRGPKRPRTILT+QQR+ FKASF+
Sbjct: 371 DLEKEMFLAAAAAQHCGFVGLDEEDLL---RPRDGRRGPKRPRTILTSQQRKQFKASFDQ 427
Query: 114 SPKPCRKVREGLARDTGLSVRIVQ 137
SPKPCRKVRE LA+DTGLSVR+VQ
Sbjct: 428 SPKPCRKVREALAKDTGLSVRVVQ 451
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC +K+ D +M + +H QC C CG +L ++ +L+C+ DY++
Sbjct: 257 CEGCGQKIH-DRYLMNVGEANWHEQCLACCYCGMQLH--HTCYVRSSKLYCKMDYDR 310
>gi|194869797|ref|XP_001972523.1| GG15572 [Drosophila erecta]
gi|190654306|gb|EDV51549.1| GG15572 [Drosophila erecta]
Length = 652
Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats.
Identities = 82/144 (56%), Positives = 100/144 (69%), Gaps = 11/144 (7%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLFC-RP 59
L+ KC C + P ELVM+ + N VFH+ CFVC C LQ+GEQF+++ GQLFC R
Sbjct: 337 LFGVKCSSCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYRH 396
Query: 60 DYEKEVEMLQGYAQGIPF------DLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEI 113
D EKE+ + AQ F DL+ + DGRRGPKRPRTILT+QQR+ FKASF+
Sbjct: 397 DLEKEMFLAAAAAQHCGFVGLDEEDLL---RPRDGRRGPKRPRTILTSQQRKQFKASFDQ 453
Query: 114 SPKPCRKVREGLARDTGLSVRIVQ 137
SPKPCRKVRE LA+DTGLSVR+VQ
Sbjct: 454 SPKPCRKVREALAKDTGLSVRVVQ 477
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC +K+ D +M D +H QC C CG +L ++ +L+C+ DY++
Sbjct: 283 CEGCGQKIH-DRFLMNVGDANWHEQCLACCYCGMQLH--HTCYVRNSKLYCKMDYDR 336
>gi|327277087|ref|XP_003223297.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Anolis
carolinensis]
Length = 381
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/149 (53%), Positives = 100/149 (67%), Gaps = 15/149 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC + + P E +M+ L+NV+HV CF C C RLQRG++FV+K+GQL CR DY
Sbjct: 95 LFQTKCSGCLKAVAPSEFIMRVLENVYHVHCFSCCECERRLQRGDEFVLKEGQLLCRSDY 154
Query: 62 EKEVEMLQGYAQGIPFDLI-------------TSSKSHDGRRGPKRPRTILTTQQRRAFK 108
EKE EML + P + + T + D +R KRPRTILTTQQRRAFK
Sbjct: 155 EKEREMLSAISPA-PTESVKSEDEDGNHPHGKTGEEGKDHKRS-KRPRTILTTQQRRAFK 212
Query: 109 ASFEISPKPCRKVREGLARDTGLSVRIVQ 137
ASFE+S KPCRKVRE LA +TGL+VR+VQ
Sbjct: 213 ASFEVSSKPCRKVRETLAAETGLTVRVVQ 241
>gi|195493808|ref|XP_002094572.1| GE21898 [Drosophila yakuba]
gi|194180673|gb|EDW94284.1| GE21898 [Drosophila yakuba]
Length = 642
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 82/144 (56%), Positives = 100/144 (69%), Gaps = 11/144 (7%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLFC-RP 59
L+ KC C + P ELVM+ + N VFH+ CFVC C LQ+GEQF+++ GQLFC R
Sbjct: 329 LFGVKCSSCCHAILPQELVMRPIPNYVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYRH 388
Query: 60 DYEKEVEMLQGYAQGIPF------DLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEI 113
D EKE+ + AQ F DL+ + DGRRGPKRPRTILT+QQR+ FKASF+
Sbjct: 389 DLEKEMFLAAAAAQHCGFVGLDEEDLL---RPRDGRRGPKRPRTILTSQQRKQFKASFDQ 445
Query: 114 SPKPCRKVREGLARDTGLSVRIVQ 137
SPKPCRKVRE LA+DTGLSVR+VQ
Sbjct: 446 SPKPCRKVREALAKDTGLSVRVVQ 469
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC +K+ D +M D +H QC C CG +L ++ +L+C+ DY++
Sbjct: 275 CEGCGQKIH-DRFLMNVGDANWHEQCLACCYCGMQLH--HTCYVRNSKLYCKMDYDR 328
>gi|449268911|gb|EMC79740.1| LIM homeobox transcription factor 1-alpha [Columba livia]
Length = 343
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/148 (53%), Positives = 98/148 (66%), Gaps = 13/148 (8%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C + + P EL+M+ L+NV+HV CF C C RLQRG++FV+K+GQL CR DY
Sbjct: 59 LFQTKCSSCLKAIAPSELIMRVLENVYHVHCFYCCECERRLQRGDEFVLKEGQLLCRSDY 118
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDG------------RRGPKRPRTILTTQQRRAFKA 109
EKE EML + P + + S G + KRPRTILTTQQRRAFKA
Sbjct: 119 EKEKEMLSAISPA-PTESVKSEDEDGGHSHGKGGEETKDHKRSKRPRTILTTQQRRAFKA 177
Query: 110 SFEISPKPCRKVREGLARDTGLSVRIVQ 137
SFE+S KPCRKVRE LA +TGL+VR+VQ
Sbjct: 178 SFEVSSKPCRKVRETLAAETGLTVRVVQ 205
>gi|307204532|gb|EFN83212.1| LIM homeobox transcription factor 1 beta [Harpegnathos saltator]
Length = 402
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 96/136 (70%), Gaps = 4/136 (2%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
++ KC C EK+ +LVM+ VFHV+CF+C +CG L RG F+++QGQ CR D+
Sbjct: 113 IFGVKCARCMEKISCSDLVMRVASLVFHVECFMCCMCGQPLPRGAHFILRQGQPICRRDF 172
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E E+ + DL+ ++ DGRRGPKRPRTILT+ QRR FKASFE+SPKPCRKV
Sbjct: 173 EHELYLNSPQDD----DLLDENRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKV 228
Query: 122 REGLARDTGLSVRIVQ 137
RE LA+DTGLSVR+VQ
Sbjct: 229 REALAKDTGLSVRVVQ 244
>gi|68448499|ref|NP_001020339.1| LIM homeobox transcription factor 1, beta a [Danio rerio]
gi|62461839|gb|AAX83056.1| LIM homeodomain protein [Danio rerio]
gi|190337362|gb|AAI63321.1| LIM homeobox transcription factor 1, beta 2 [Danio rerio]
gi|190339774|gb|AAI63333.1| LIM homeobox transcription factor 1, beta 2 [Danio rerio]
Length = 373
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/152 (53%), Positives = 102/152 (67%), Gaps = 17/152 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P ELVM+ L++V+H+ CF C VC RL +G++FV+K+GQL C+ DY
Sbjct: 85 LFATKCSGCLEKISPTELVMRALESVYHLSCFCCCVCERRLCKGDEFVLKEGQLLCKTDY 144
Query: 62 EKEVEM----LQGYAQGIPFDLIT------------SSKSHDGRRGPKRPRTILTTQQRR 105
E+E ++ L + DL S S D RR PKRPRTILTTQQRR
Sbjct: 145 EREKDLASPDLSDSDKSEDEDLDVKPEKGAGGQGKGSDDSKDPRR-PKRPRTILTTQQRR 203
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 204 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 235
>gi|170032119|ref|XP_001843930.1| lim homeobox protein [Culex quinquefasciatus]
gi|167871879|gb|EDS35262.1| lim homeobox protein [Culex quinquefasciatus]
Length = 400
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 99/142 (69%), Gaps = 12/142 (8%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
++C GC E++ P+E+VM+ ++VFH+ CF+C C LQ+GE F +K G+L C+ D EK+
Sbjct: 93 RECYGCGERIAPNEMVMRAKNHVFHLNCFLCYTCNRPLQKGEPFSLKSGKLICQHDLEKD 152
Query: 65 V---------EMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISP 115
+ L G + D + +S DGRRGPKRPRTILT+ QRR FKASF++SP
Sbjct: 153 MYSSLHPIHSHHLYGDDDYLMEDGL---RSRDGRRGPKRPRTILTSAQRRQFKASFDVSP 209
Query: 116 KPCRKVREGLARDTGLSVRIVQ 137
KPCRKVRE LA+DTGLSVR+VQ
Sbjct: 210 KPCRKVREALAKDTGLSVRVVQ 231
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC +K+ + + D +H QC +C +C +Q K +++C+ DY
Sbjct: 17 CEGCGQKIKDRYFMKISPDQYWHEQCLLCCICN--IQLNHSCFTKNTKVYCKDDY 69
>gi|48375213|gb|AAT42259.1| LIM homeodomain protein Lmx1b.2 [Danio rerio]
Length = 375
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/152 (53%), Positives = 102/152 (67%), Gaps = 17/152 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P ELVM+ L++V+H+ CF C VC RL +G++FV+K+GQL C+ DY
Sbjct: 87 LFATKCSGCLEKISPTELVMRALESVYHLSCFCCCVCERRLCKGDEFVLKEGQLLCKTDY 146
Query: 62 EKEVEM----LQGYAQGIPFDLIT------------SSKSHDGRRGPKRPRTILTTQQRR 105
E+E ++ L + DL S S D RR PKRPRTILTTQQRR
Sbjct: 147 EREKDLASPDLSDSDKSEDEDLDVKPEKGAGGQGKGSDDSKDPRR-PKRPRTILTTQQRR 205
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 206 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 237
>gi|291237424|ref|XP_002738638.1| PREDICTED: Lim homeobox transcription factor [Saccoglossus
kowalevskii]
Length = 441
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 102/168 (60%), Gaps = 32/168 (19%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC + + +ELVM+ L NV+H++CF C++C RLQ+G++FV++ QLFC+ DY
Sbjct: 95 LFGTKCNGCLQSITSNELVMRALCNVYHLRCFNCIICNQRLQKGDEFVVRDNQLFCKVDY 154
Query: 62 EKEVEML-----QGYAQGIPFDLI---------------------------TSSKSHDGR 89
EKE + QG+ D+I T DGR
Sbjct: 155 EKEYGSVQLSSPQGHHSEDDSDVIDEGYLDNSVSNTMDDNSGNDSDTNSTDTKGNGGDGR 214
Query: 90 RGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+GPKRPRTILTT QRRAFK SFE+S KPCRKVRE LA DTGLSVR+VQ
Sbjct: 215 KGPKRPRTILTTAQRRAFKQSFEVSQKPCRKVRESLAADTGLSVRVVQ 262
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC + + D +M+ ++N +H QC C VC S L R F K +L+C+ DYEK
Sbjct: 41 CAGCQQPI-EDRFLMRVMENSWHEQCLQCSVCQSPLSRSCYF--KDRKLYCKGDYEK 94
>gi|383792181|ref|NP_001244317.1| LIM homeobox transcription factor 1-alpha [Gallus gallus]
Length = 380
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 100/152 (65%), Gaps = 17/152 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P ELVM+ +V+H+ CF C VC RLQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCAGCLESIAPSELVMRAQQSVYHLHCFCCCVCERRLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQGYAQGI----------------PFDLITSSKSHDGRRGPKRPRTILTTQQRR 105
EKE E+L + + P + + D +R PKRPRTILTTQQRR
Sbjct: 149 EKERELLSLVSPALSDSGKSDDEDSVCKMGPASAKGAEEGKDHKR-PKRPRTILTTQQRR 207
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 208 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 239
>gi|328715997|ref|XP_001946565.2| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Acyrthosiphon pisum]
Length = 407
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/145 (58%), Positives = 104/145 (71%), Gaps = 11/145 (7%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTL-DNVFHVQCFVCVVCGSRLQRGEQFVIKQG--QLFCR 58
L+ KC C E LG ELVM+ +V+HV CF CV C LQ+G+Q+V+K G QLFCR
Sbjct: 87 LFGVKCGRCGEPLGARELVMRAGPSHVYHVGCFACVACMQPLQKGQQYVVKAGGGQLFCR 146
Query: 59 PDYEKEVEMLQ---GYAQGIPFDLIT---SSKSHDGRRGPKRPRTILTTQQRRAFKASFE 112
D+EKE+ ++Q G Q P D +T + + DGRRGPKRPRTILT+ QRR FKASFE
Sbjct: 147 TDFEKEIFLMQQTVGSPQ--PDDSLTLDENCRPRDGRRGPKRPRTILTSVQRRQFKASFE 204
Query: 113 ISPKPCRKVREGLARDTGLSVRIVQ 137
+SPKPCRKVRE LA+DTGLSVR+VQ
Sbjct: 205 VSPKPCRKVREALAKDTGLSVRVVQ 229
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC K+ D +M+ + +H QC C CG L + + + L+C+ DY++
Sbjct: 32 SCEGCGTKI-VDRFLMRVGTSSWHEQCVTCSACGVPLAKSCYY--RHNGLYCKNDYDR 86
>gi|326924822|ref|XP_003208624.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-alpha-like [Meleagris gallopavo]
Length = 367
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 100/152 (65%), Gaps = 17/152 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P ELVM+ +V+H+ CF C VC RLQ+G++FV+K+GQL C+ DY
Sbjct: 76 LFAVKCAGCLESIAPSELVMRAQQSVYHLHCFCCCVCERRLQKGDEFVLKEGQLLCKGDY 135
Query: 62 EKEVEMLQGYAQGI----------------PFDLITSSKSHDGRRGPKRPRTILTTQQRR 105
EKE E+L + + P + + D +R PKRPRTILTTQQRR
Sbjct: 136 EKERELLSLVSPALSDSGKSDDEDSVCKMGPASAKGAEEGKDHKR-PKRPRTILTTQQRR 194
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 195 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 226
>gi|449478514|ref|XP_002188995.2| PREDICTED: LIM/homeobox protein LMX-1.2-like [Taeniopygia guttata]
Length = 352
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 101/154 (65%), Gaps = 18/154 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 62 LFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDY 121
Query: 62 EKEVEML----------------QGYAQGIPFDLITSSKSHDGR--RGPKRPRTILTTQQ 103
EKE ++L G + + S DG+ R PKRPRTILTTQQ
Sbjct: 122 EKEKDLLSSVSPDDSDSVKSDDEDGDVKPTKGQVTQGKGSDDGKDPRRPKRPRTILTTQQ 181
Query: 104 RRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 182 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 215
>gi|321473071|gb|EFX84039.1| hypothetical protein DAPPUDRAFT_24627 [Daphnia pulex]
Length = 225
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/144 (54%), Positives = 100/144 (69%), Gaps = 8/144 (5%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNV-FHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+Y KC C E+L P ELVM+ ++ FH+ CF C +CG LQ+G+QFV++ GQL CR D
Sbjct: 56 VYGAKCGRCGERLYPHELVMRAGSSLAFHLPCFGCFICGRPLQKGDQFVVRAGQLLCRDD 115
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKS-------HDGRRGPKRPRTILTTQQRRAFKASFEI 113
EK++ ++Q + S + HDGRRGPKRPRTILT+ QRR FKASFEI
Sbjct: 116 LEKDLFLIQSTTNNNNNNNGDDSAADDSSRPRHDGRRGPKRPRTILTSAQRRQFKASFEI 175
Query: 114 SPKPCRKVREGLARDTGLSVRIVQ 137
SPKPCRKVRE LA++TGLSVR+VQ
Sbjct: 176 SPKPCRKVREALAKETGLSVRVVQ 199
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC + D VM+ D +H C VC +C + L + G+++CR DY++
Sbjct: 2 CEGCGLGIA-DRYVMRVADGSWHEDCLVCCICHAPLV--HSCFTRSGRVYCRQDYDR 55
>gi|1145814|gb|AAA84995.1| LIM homeodomain protein [Gallus gallus]
Length = 377
Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 101/154 (65%), Gaps = 18/154 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 87 LFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDY 146
Query: 62 EKEVEML----------------QGYAQGIPFDLITSSKSHDGR--RGPKRPRTILTTQQ 103
EKE ++L G + + S DG+ R PKRPRTILTTQQ
Sbjct: 147 EKEKDLLSSVSPDDSDSVKSDDEDGDVKPTKGQVTQGKGSDDGKDPRRPKRPRTILTTQQ 206
Query: 104 RRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 207 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|45382493|ref|NP_990689.1| LIM/homeobox protein LMX-1.2 [Gallus gallus]
gi|1708855|sp|P53413.1|LMX1B_CHICK RecName: Full=LIM/homeobox protein LMX-1.2; Short=Homeobox protein
LMX-1; Short=LIM/homeobox protein 1; Short=LMX
gi|1050198|gb|AAA96240.1| LIM1 domain bp 172-315, LIM2 domain bp 349-501, homeobox domain bp
655-831 [Gallus gallus]
Length = 377
Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 101/154 (65%), Gaps = 18/154 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 87 LFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDY 146
Query: 62 EKEVEML----------------QGYAQGIPFDLITSSKSHDGR--RGPKRPRTILTTQQ 103
EKE ++L G + + S DG+ R PKRPRTILTTQQ
Sbjct: 147 EKEKDLLSSVSPDDSDSVKSDDEDGDVKPTKGQVTQGKGSDDGKDPRRPKRPRTILTTQQ 206
Query: 104 RRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 207 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|334311511|ref|XP_003339631.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Monodelphis domestica]
Length = 401
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 100/154 (64%), Gaps = 18/154 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDY 169
Query: 62 EKEVEML----------------QGYAQGIPFDLITSSKSHDGR--RGPKRPRTILTTQQ 103
EKE ++L G + S DG+ R PKRPRTILTTQQ
Sbjct: 170 EKEKDLLSSVSPDESDSVKSDEEDGDVKPAKGQGGQGKGSDDGKDPRRPKRPRTILTTQQ 229
Query: 104 RRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 263
>gi|395505738|ref|XP_003757196.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Sarcophilus harrisii]
Length = 401
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 100/154 (64%), Gaps = 18/154 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDY 169
Query: 62 EKEVEML----------------QGYAQGIPFDLITSSKSHDGR--RGPKRPRTILTTQQ 103
EKE ++L G + S DG+ R PKRPRTILTTQQ
Sbjct: 170 EKEKDLLSSVSPDESDSVKSDEEDGDVKPAKGQGGQGKGSDDGKDPRRPKRPRTILTTQQ 229
Query: 104 RRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 263
>gi|395505736|ref|XP_003757195.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Sarcophilus harrisii]
Length = 404
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 100/154 (64%), Gaps = 18/154 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDY 169
Query: 62 EKEVEML----------------QGYAQGIPFDLITSSKSHDGR--RGPKRPRTILTTQQ 103
EKE ++L G + S DG+ R PKRPRTILTTQQ
Sbjct: 170 EKEKDLLSSVSPDESDSVKSDEEDGDVKPAKGQGGQGKGSDDGKDPRRPKRPRTILTTQQ 229
Query: 104 RRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 263
>gi|395505734|ref|XP_003757194.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Sarcophilus harrisii]
Length = 394
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 100/154 (64%), Gaps = 18/154 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDY 169
Query: 62 EKEVEML----------------QGYAQGIPFDLITSSKSHDGR--RGPKRPRTILTTQQ 103
EKE ++L G + S DG+ R PKRPRTILTTQQ
Sbjct: 170 EKEKDLLSSVSPDESDSVKSDEEDGDVKPAKGQGGQGKGSDDGKDPRRPKRPRTILTTQQ 229
Query: 104 RRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 263
>gi|334311509|ref|XP_001366137.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Monodelphis domestica]
Length = 394
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 100/154 (64%), Gaps = 18/154 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDY 169
Query: 62 EKEVEML----------------QGYAQGIPFDLITSSKSHDGR--RGPKRPRTILTTQQ 103
EKE ++L G + S DG+ R PKRPRTILTTQQ
Sbjct: 170 EKEKDLLSSVSPDESDSVKSDEEDGDVKPAKGQGGQGKGSDDGKDPRRPKRPRTILTTQQ 229
Query: 104 RRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 263
>gi|348565813|ref|XP_003468697.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Cavia
porcellus]
Length = 382
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 101/159 (63%), Gaps = 30/159 (18%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEML-----------------------QGYAQGIPFDLITSSKSHDGRRGPKRPRTI 98
EKE E+L QG +G P D K H + PKRPRTI
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSSQGAGKGTPED----GKDH---KRPKRPRTI 201
Query: 99 LTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
LTTQQRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 202 LTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|224058880|ref|XP_002190501.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Taeniopygia
guttata]
Length = 379
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 100/151 (66%), Gaps = 15/151 (9%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P ELVM+ +V+H+ CF C VC RLQ+G++FV+K+GQL C+ DY
Sbjct: 87 LFAVKCAGCLEPIAPSELVMRAQKSVYHLHCFCCCVCERRLQKGDEFVLKEGQLLCKGDY 146
Query: 62 EKEVEMLQGYAQGIP-------------FDLITSSKSHDGR--RGPKRPRTILTTQQRRA 106
EKE E+L + + + + DG+ + PKRPRTILTTQQRRA
Sbjct: 147 EKERELLSLVSPALSDSGKSDDEDSICKLGQASGKGAEDGKDHKRPKRPRTILTTQQRRA 206
Query: 107 FKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
FKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 207 FKASFEVSSKPCRKVRETLAAETGLSVRVVQ 237
>gi|449268581|gb|EMC79437.1| LIM/homeobox protein LMX-1.2, partial [Columba livia]
Length = 291
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 101/154 (65%), Gaps = 18/154 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 1 LFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDY 60
Query: 62 EKEVEML----------------QGYAQGIPFDLITSSKSHDGR--RGPKRPRTILTTQQ 103
EKE ++L G + + S DG+ R PKRPRTILTTQQ
Sbjct: 61 EKEKDLLSSVSPDDSDSVKSDDEDGDVKPTKGQVNQGKGSDDGKDPRRPKRPRTILTTQQ 120
Query: 104 RRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 121 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 154
>gi|301616969|ref|XP_002937919.1| PREDICTED: LIM/homeobox protein LMX-1.2-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 393
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 102/154 (66%), Gaps = 18/154 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDY 169
Query: 62 EKEVEML----------------QGYAQGIPFDLITSSKSHDGR--RGPKRPRTILTTQQ 103
EKE ++L +G + + S DG+ R PKRPRTILTTQQ
Sbjct: 170 EKEKDLLSSGSPDDSDSVKSDDEEGDVKPGKCHVNQGKGSDDGKDPRRPKRPRTILTTQQ 229
Query: 104 RRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 263
>gi|301616967|ref|XP_002937918.1| PREDICTED: LIM/homeobox protein LMX-1.2-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 400
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 102/154 (66%), Gaps = 18/154 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDY 169
Query: 62 EKEVEML----------------QGYAQGIPFDLITSSKSHDGR--RGPKRPRTILTTQQ 103
EKE ++L +G + + S DG+ R PKRPRTILTTQQ
Sbjct: 170 EKEKDLLSSGSPDDSDSVKSDDEEGDVKPGKCHVNQGKGSDDGKDPRRPKRPRTILTTQQ 229
Query: 104 RRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 263
>gi|410922082|ref|XP_003974512.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Takifugu
rubripes]
Length = 375
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 103/159 (64%), Gaps = 30/159 (18%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 87 LFATKCSGCMEKIAPTEFVMRALECVYHLNCFCCCVCDRQLRKGDEFVLKEGQLLCKFDY 146
Query: 62 EKEVEML-----------------------QGYAQGIPFDLITSSKSHDGRRGPKRPRTI 98
E+E ++L +G +QG D S D RR PKRPRTI
Sbjct: 147 EREKDLLSSVSPDDSDSEKSDDEELDIKQEKGISQGKGDD------SKDSRR-PKRPRTI 199
Query: 99 LTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
LTTQQRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 200 LTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 238
>gi|149058121|gb|EDM09278.1| LIM homeobox transcription factor 1 alpha (predicted) [Rattus
norvegicus]
Length = 263
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 99/152 (65%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D + KS G + PKRPRTILTTQQRR
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGASEDGKDHKRPKRPRTILTTQQRR 208
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 209 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|148227168|ref|NP_001083902.1| LIM homeobox transcription factor 1-beta.1 [Xenopus laevis]
gi|82216057|sp|Q8UVR3.1|LMX1B_XENLA RecName: Full=LIM homeobox transcription factor 1-beta.1; AltName:
Full=LIM homeobox protein 1b; Short=Xlmx1b
gi|16974694|gb|AAL32444.1|AF414086_1 LIM homeobox protein 1b [Xenopus laevis]
Length = 400
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 102/154 (66%), Gaps = 18/154 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDY 169
Query: 62 EKEVEML----------------QGYAQGIPFDLITSSKSHDGR--RGPKRPRTILTTQQ 103
EKE ++L +G + + S DG+ R PKRPRTILTTQQ
Sbjct: 170 EKEKDLLSSGSPDDSDSVKSDDEEGDVKPGKGRVNQGKGSDDGKDPRRPKRPRTILTTQQ 229
Query: 104 RRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 263
>gi|301608740|ref|XP_002933954.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Xenopus
(Silurana) tropicalis]
Length = 533
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/147 (53%), Positives = 100/147 (68%), Gaps = 12/147 (8%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C + + P EL+M+ L NV+HV CF C C RL+RG++FV+K+GQL CR DY
Sbjct: 240 LFATKCNSCLKTVLPSELIMRVLSNVYHVACFFCCECERRLERGDEFVLKEGQLLCRSDY 299
Query: 62 EKEVEMLQGYAQGIPFDLITSS---------KSHDGR--RGPKRPRTILTTQQRRAFKAS 110
E+E EML + P + S KS +G+ + KRPRTILTTQQRRAFKAS
Sbjct: 300 EREKEMLSALSL-TPSGSVKSEDEDGASLQGKSDEGKDPKRSKRPRTILTTQQRRAFKAS 358
Query: 111 FEISPKPCRKVREGLARDTGLSVRIVQ 137
FE+S KPCRKVRE LA +TGL+VR+VQ
Sbjct: 359 FEVSSKPCRKVRETLAAETGLTVRVVQ 385
>gi|328779726|ref|XP_001120677.2| PREDICTED: LIM homeobox transcription factor 1-beta-like [Apis
mellifera]
Length = 402
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 94/136 (69%), Gaps = 4/136 (2%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
++ KC C EK+ + V++T +VFHV+CF C +CG L G + ++QGQ CR DY
Sbjct: 112 IFGVKCARCMEKISCSDFVLRTPGSVFHVECFACCMCGQPLPPGAHYFLRQGQPICRRDY 171
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E E+ + DL+ ++ DGRRGPKRPRTILT+ QRR FKASFE+SPKPCRKV
Sbjct: 172 EHELYLNSPQDD----DLLDDNRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKV 227
Query: 122 REGLARDTGLSVRIVQ 137
RE LA+DTGLSVR+VQ
Sbjct: 228 REALAKDTGLSVRVVQ 243
>gi|380030211|ref|XP_003698747.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-beta-like [Apis florea]
Length = 402
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 94/136 (69%), Gaps = 4/136 (2%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
++ KC C EK+ + V++T +VFHV+CF C +CG L G + ++QGQ CR DY
Sbjct: 112 IFGVKCARCMEKISCSDFVLRTPGSVFHVECFACCMCGQPLPPGAHYXLRQGQPICRRDY 171
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E E+ + DL+ ++ DGRRGPKRPRTILT+ QRR FKASFE+SPKPCRKV
Sbjct: 172 EHELYLNSPQDD----DLLDDNRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKV 227
Query: 122 REGLARDTGLSVRIVQ 137
RE LA+DTGLSVR+VQ
Sbjct: 228 REALAKDTGLSVRVVQ 243
>gi|383861320|ref|XP_003706134.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Megachile
rotundata]
Length = 402
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 94/136 (69%), Gaps = 4/136 (2%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
++ KC C EK+ + V++T VFHV+CF C +CG L G Q+ ++QGQ CR DY
Sbjct: 112 IFGVKCARCMEKISCSDFVLRTPGLVFHVECFACCMCGQPLPPGTQYFLRQGQPICRRDY 171
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E E+ + DL+ ++ DGRRGPKRPRTILT+ QRR FKASFE+SPKPCRKV
Sbjct: 172 EHELYLNSPQDD----DLLDENRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKV 227
Query: 122 REGLARDTGLSVRIVQ 137
RE LA+DTGLSVR+VQ
Sbjct: 228 REALAKDTGLSVRVVQ 243
>gi|62461837|gb|AAX83055.1| LIM homeodomain protein [Danio rerio]
Length = 375
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/157 (50%), Positives = 99/157 (63%), Gaps = 25/157 (15%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K GQL C+ DY
Sbjct: 87 LFATKCSGCLEKIAPTEFVMRALECVYHLNCFCCCVCDRQLRKGDEFVLKDGQLLCKSDY 146
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR---------------------RGPKRPRTILT 100
E+E ++L + D S KS D R PKRPRTILT
Sbjct: 147 EREKDLL----GSVSPDDSDSEKSEDEELDIKPEKGSGGTGKGDDGKDPRRPKRPRTILT 202
Query: 101 TQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
TQQRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 203 TQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 239
>gi|311253923|ref|XP_003125689.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Sus
scrofa]
Length = 382
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 100/159 (62%), Gaps = 30/159 (18%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEML-----------------------QGYAQGIPFDLITSSKSHDGRRGPKRPRTI 98
EKE E+L G +G P D K H + PKRPRTI
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGAPED----GKDH---KRPKRPRTI 201
Query: 99 LTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
LTTQQRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 202 LTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|300797454|ref|NP_001178254.1| LIM homeobox transcription factor 1-alpha [Bos taurus]
gi|296489924|tpg|DAA32037.1| TPA: LIM homeobox transcription factor 1 alpha-like [Bos taurus]
Length = 382
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 99/152 (65%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D + KS G + PKRPRTILTTQQRR
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGASEDSKDHKRPKRPRTILTTQQRR 208
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 209 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|309243111|ref|NP_001020338.2| LIM homeobox transcription factor 1, beta 1 [Danio rerio]
gi|48375211|gb|AAT42258.1| LIM homeodomain protein Lmx1b.1 [Danio rerio]
gi|190337176|gb|AAI62952.1| LIM homeobox transcription factor 1, beta 1 [Danio rerio]
gi|190338183|gb|AAI62932.1| LIM homeobox transcription factor 1, beta 1 [Danio rerio]
Length = 375
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/157 (50%), Positives = 99/157 (63%), Gaps = 25/157 (15%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K GQL C+ DY
Sbjct: 87 LFATKCSGCLEKIAPTEFVMRALECVYHLNCFCCCVCDRQLRKGDEFVLKDGQLLCKSDY 146
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR---------------------RGPKRPRTILT 100
E+E ++L + D S KS D R PKRPRTILT
Sbjct: 147 EREKDLL----GSVSPDDSDSEKSEDEELDIKPEKGSGGTGKGDDGKDPRRPKRPRTILT 202
Query: 101 TQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
TQQRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 203 TQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 239
>gi|332220030|ref|XP_003259160.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-alpha [Nomascus leucogenys]
Length = 368
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 99/152 (65%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D + KS G + PKRPRTILTTQQRR
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGTAEEGKDHKRPKRPRTILTTQQRR 208
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 209 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|327290473|ref|XP_003229947.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like, partial
[Anolis carolinensis]
Length = 293
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 97/152 (63%), Gaps = 17/152 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C E + P + VM+ NV+HV CF C VC +LQ+G++FV+K+GQL C DY
Sbjct: 1 LFAVKCSNCFEAISPSQFVMRAQKNVYHVACFCCGVCEKQLQKGDEFVLKEGQLLCNSDY 60
Query: 62 EKEVEMLQ-----GYAQGIPFDLIT-----------SSKSHDGRRGPKRPRTILTTQQRR 105
EKE E+L G D+ S + D +R PKRPRTILTTQQRR
Sbjct: 61 EKECELLSLVSPAASDPGKSSDVENLCKMEEKTRKVSEDTKDHKR-PKRPRTILTTQQRR 119
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 120 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 151
>gi|432874756|ref|XP_004072577.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Oryzias
latipes]
Length = 398
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/153 (52%), Positives = 102/153 (66%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFATKCSGCMEKIAPTEFVMRALECVYHLNCFCCCVCDRQLRKGDEFVLKEGQLLCKVDY 169
Query: 62 EKEVEMLQGYAQGI--------------PFDLITS-SKSHDGR--RGPKRPRTILTTQQR 104
E+E ++L + P I S K DG+ R PKRPRTILTTQQR
Sbjct: 170 EREKDLLSSVSPDDSDSEKSDDEELDIKPEKGIGSQGKGDDGKDPRRPKRPRTILTTQQR 229
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 262
>gi|351696220|gb|EHA99138.1| LIM homeobox transcription factor 1-alpha [Heterocephalus glaber]
Length = 382
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 98/155 (63%), Gaps = 22/155 (14%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQ-------------------GYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQ 102
EKE E+L AQG K H + PKRPRTILTTQ
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSAQGTGKGATEDGKDH---KRPKRPRTILTTQ 205
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 206 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|348516128|ref|XP_003445591.1| PREDICTED: LIM homeobox transcription factor 1-beta.1-like
[Oreochromis niloticus]
Length = 399
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/153 (52%), Positives = 102/153 (66%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFATKCSGCMEKIAPTEFVMRALECVYHLNCFCCCVCDRQLRKGDEFVLKEGQLLCKIDY 169
Query: 62 EKEVEMLQGYAQGI--------------PFDLITS-SKSHDGR--RGPKRPRTILTTQQR 104
E+E ++L + P I S K DG+ R PKRPRTILTTQQR
Sbjct: 170 EREKDLLSSVSPDDSDSEKSDDEELDIKPEKGIGSQGKGDDGKDPRRPKRPRTILTTQQR 229
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 262
>gi|47212495|emb|CAG12709.1| unnamed protein product [Tetraodon nigroviridis]
Length = 285
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 102/159 (64%), Gaps = 30/159 (18%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 2 LFATKCSGCMEKIAPTEFVMRALECVYHLNCFCCCVCDRQLRKGDEFVLKEGQLLCKFDY 61
Query: 62 EKEVEML-----------------------QGYAQGIPFDLITSSKSHDGRRGPKRPRTI 98
E+E ++L +G QG D S D RR PKRPRTI
Sbjct: 62 EREKDLLSSVSPDDSDSEKSDDEELDIKQEKGIGQGKGDD------SKDSRR-PKRPRTI 114
Query: 99 LTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
LTTQQRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 115 LTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 153
>gi|426217051|ref|XP_004002767.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Ovis aries]
Length = 382
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 99/152 (65%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D + KS G + PKRPRTILTTQQRR
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGASEDSKDHKRPKRPRTILTTQQRR 208
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 209 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|345797790|ref|XP_851352.2| PREDICTED: LIM homeobox transcription factor 1-alpha [Canis lupus
familiaris]
Length = 382
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 99/152 (65%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D + KS G + PKRPRTILTTQQRR
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGAAEDGKDHKRPKRPRTILTTQQRR 208
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 209 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|395825137|ref|XP_003785798.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Otolemur
garnettii]
Length = 382
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 99/152 (65%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D + KS G + PKRPRTILTTQQRR
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGAAEDGKDHKRPKRPRTILTTQQRR 208
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 209 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|158187529|ref|NP_001099437.2| LIM homeobox transcription factor 1 alpha [Rattus norvegicus]
Length = 382
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 99/152 (65%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D + KS G + PKRPRTILTTQQRR
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGASEDGKDHKRPKRPRTILTTQQRR 208
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 209 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|17298670|ref|NP_387501.1| LIM homeobox transcription factor 1-alpha [Mus musculus]
gi|27923804|sp|Q9JKU8.1|LMX1A_MOUSE RecName: Full=LIM homeobox transcription factor 1-alpha; AltName:
Full=LIM/homeobox protein 1.1; Short=LMX-1.1; AltName:
Full=LIM/homeobox protein LMX1A
gi|7230571|gb|AAF43012.1|AF226662_1 lim homeodomain-containing transcription factor [Mus musculus]
gi|26336939|dbj|BAC32153.1| unnamed protein product [Mus musculus]
gi|80477081|gb|AAI09168.1| LIM homeobox transcription factor 1 alpha [Mus musculus]
gi|80478204|gb|AAI09169.1| LIM homeobox transcription factor 1 alpha [Mus musculus]
Length = 382
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 99/152 (65%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D + KS G + PKRPRTILTTQQRR
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGASEDGKDHKRPKRPRTILTTQQRR 208
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 209 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|291397514|ref|XP_002715925.1| PREDICTED: LIM homeobox transcription factor 1 alpha-like
[Oryctolagus cuniculus]
Length = 382
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 99/152 (65%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D + KS G + PKRPRTILTTQQRR
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSAHGTGKGAAEDGKDHKRPKRPRTILTTQQRR 208
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 209 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|403272543|ref|XP_003928115.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Saimiri boliviensis boliviensis]
gi|403272545|ref|XP_003928116.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Saimiri boliviensis boliviensis]
Length = 382
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 99/152 (65%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D + KS G + PKRPRTILTTQQRR
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGTAEEGKDHKRPKRPRTILTTQQRR 208
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 209 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|354486854|ref|XP_003505592.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Cricetulus griseus]
Length = 382
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 99/152 (65%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D + KS G + PKRPRTILTTQQRR
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGASEDGKDHKRPKRPRTILTTQQRR 208
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 209 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|547859|sp|Q04650.1|LMX1A_MESAU RecName: Full=LIM homeobox transcription factor 1-alpha; AltName:
Full=LIM/homeobox protein LMX1A; Short=LIM/homeobox
protein 1; Short=LMX-1
gi|587461|emb|CAA57163.1| lmx1.1 [Mesocricetus auratus]
Length = 382
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 99/152 (65%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D + KS G + PKRPRTILTTQQRR
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGTSEDGKDHKRPKRPRTILTTQQRR 208
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 209 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|28893581|ref|NP_796372.1| LIM homeobox transcription factor 1-alpha [Homo sapiens]
gi|291327513|ref|NP_001167540.1| LIM homeobox transcription factor 1-alpha [Homo sapiens]
gi|109019319|ref|XP_001084612.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Macaca mulatta]
gi|109019321|ref|XP_001084727.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 3
[Macaca mulatta]
gi|114561083|ref|XP_001174539.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2 [Pan
troglodytes]
gi|114561085|ref|XP_001174542.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 3 [Pan
troglodytes]
gi|296229940|ref|XP_002760489.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Callithrix
jacchus]
gi|397508364|ref|XP_003824628.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1 [Pan
paniscus]
gi|397508366|ref|XP_003824629.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2 [Pan
paniscus]
gi|402858034|ref|XP_003893535.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Papio anubis]
gi|402858036|ref|XP_003893536.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Papio anubis]
gi|426332555|ref|XP_004027869.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Gorilla gorilla gorilla]
gi|426332557|ref|XP_004027870.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Gorilla gorilla gorilla]
gi|27923801|sp|Q8TE12.1|LMX1A_HUMAN RecName: Full=LIM homeobox transcription factor 1-alpha; AltName:
Full=LIM/homeobox protein 1.1; Short=LMX-1.1; AltName:
Full=LIM/homeobox protein LMX1A
gi|19879681|gb|AAL82892.1| LIM homeobox transcription factor 1 alpha [Homo sapiens]
gi|119611150|gb|EAW90744.1| LIM homeobox transcription factor 1, alpha, isoform CRA_b [Homo
sapiens]
gi|182887815|gb|AAI60062.1| LIM homeobox transcription factor 1, alpha [synthetic construct]
gi|193785405|dbj|BAG54558.1| unnamed protein product [Homo sapiens]
gi|208966672|dbj|BAG73350.1| LIM homeobox transcription factor 1, alpha [synthetic construct]
gi|355558990|gb|EHH15770.1| hypothetical protein EGK_01906 [Macaca mulatta]
gi|355746154|gb|EHH50779.1| hypothetical protein EGM_01656 [Macaca fascicularis]
Length = 382
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 99/152 (65%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D + KS G + PKRPRTILTTQQRR
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGTAEEGKDHKRPKRPRTILTTQQRR 208
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 209 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|390345308|ref|XP_790548.3| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Strongylocentrotus purpuratus]
Length = 387
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 98/136 (72%), Gaps = 7/136 (5%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C + + ELVM+ L NV+H++CF CV C +L++G++FV+K+ +L+C+ DY
Sbjct: 87 LFGTKCNACFQSIPSSELVMRALSNVYHLRCFTCVTCDQQLKKGDEFVLKENRLYCKEDY 146
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
KE + + + S S DGR+GPKRPRTILTT QRRAFKASFE+S KPCRKV
Sbjct: 147 TKEHTVDTQ-------KVSSKSSSQDGRKGPKRPRTILTTSQRRAFKASFEVSSKPCRKV 199
Query: 122 REGLARDTGLSVRIVQ 137
RE LA++TGLSVR+VQ
Sbjct: 200 RETLAKETGLSVRVVQ 215
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC + D +MK +D+ +H QC C VC R++ + +L+C+ DYEK
Sbjct: 33 CAGCQRAID-DRYLMKVMDHCWHEQCLQCSVC--RIRLSHSCFARDRKLYCKLDYEK 86
>gi|440910599|gb|ELR60379.1| LIM homeobox transcription factor 1-alpha, partial [Bos grunniens
mutus]
Length = 303
Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 98/155 (63%), Gaps = 22/155 (14%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 10 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 69
Query: 62 EKEVEMLQ-------------------GYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQ 102
EKE E+L A G SK H + PKRPRTILTTQ
Sbjct: 70 EKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGASEDSKDH---KRPKRPRTILTTQ 126
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 127 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 161
>gi|301756737|ref|XP_002914217.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Ailuropoda melanoleuca]
Length = 382
Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 99/152 (65%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAVAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D + KS G + PKRPRTILTTQQRR
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGATEDGKDHKRPKRPRTILTTQQRR 208
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 209 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|344236825|gb|EGV92928.1| LIM homeobox transcription factor 1-alpha [Cricetulus griseus]
Length = 333
Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 99/152 (65%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 40 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 99
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D + KS G + PKRPRTILTTQQRR
Sbjct: 100 EKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGASEDGKDHKRPKRPRTILTTQQRR 159
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 160 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 191
>gi|149755774|ref|XP_001493379.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Equus
caballus]
Length = 382
Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 99/152 (65%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D + KS G + PKRPRTILTTQQRR
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSAHGTGKGAAEDGKDHKRPKRPRTILTTQQRR 208
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 209 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|148707230|gb|EDL39177.1| LIM homeobox transcription factor 1 alpha [Mus musculus]
Length = 352
Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 99/152 (65%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D + KS G + PKRPRTILTTQQRR
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGASEDGKDHKRPKRPRTILTTQQRR 208
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 209 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|410986575|ref|XP_003999585.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Felis catus]
Length = 382
Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/152 (52%), Positives = 100/152 (65%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKS-HDGRRG----------PKRPRTILTTQQRR 105
EKE E+L G D + KS H +G PKRPRTILTTQQRR
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSVHGAGKGAAEDGKDHKRPKRPRTILTTQQRR 208
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 209 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|344287033|ref|XP_003415260.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Loxodonta
africana]
Length = 382
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 98/152 (64%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D KS G + PKRPRTILTTQQRR
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEENLCKSAHGAGKGAAEDGKDHKRPKRPRTILTTQQRR 208
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 209 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|307189897|gb|EFN74141.1| LIM homeobox transcription factor 1 beta [Camponotus floridanus]
Length = 402
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 96/137 (70%), Gaps = 5/137 (3%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
++ KC C EK+ +LVM+ + VFHV+CF C +CG L RG ++++QGQ CR D
Sbjct: 112 IFGVKCARCMEKISCSDLVMRPVSGLVFHVECFACCMCGQPLPRGAHYILRQGQPICRRD 171
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
+E E+ + DL+ ++ DGRRGPKRPRTILT+ QRR FKASFE+SPKPCRK
Sbjct: 172 FEHELFLNSPQDD----DLLDENRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRK 227
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA+DTGLSVR+VQ
Sbjct: 228 VREALAKDTGLSVRVVQ 244
>gi|326666245|ref|XP_001922131.3| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Danio
rerio]
Length = 396
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/150 (52%), Positives = 100/150 (66%), Gaps = 15/150 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+V+KC C + +G EL+M+ L V+H+ CF C C RLQRG++FV+K+GQL CR DY
Sbjct: 114 LFVRKCSACLQAIGRSELIMRVLGQVYHLGCFSCCECERRLQRGDEFVLKEGQLLCRGDY 173
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSH------------DGR--RGPKRPRTILTTQQRRAF 107
EKE EML + P + + S DG+ + KRPRTILTTQQRRAF
Sbjct: 174 EKEREMLAAISPA-PTESVKSEDEEGGGVSVGGKAGDDGKEHKRSKRPRTILTTQQRRAF 232
Query: 108 KASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KASFE+S KPCRKVRE LA +TGL+VR+VQ
Sbjct: 233 KASFEVSSKPCRKVRETLAAETGLTVRVVQ 262
>gi|355763645|gb|EHH62200.1| LIM/homeobox protein LMX1B [Macaca fascicularis]
Length = 379
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 91 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 150
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 151 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 210
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 211 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 245
>gi|281348858|gb|EFB24442.1| hypothetical protein PANDA_002084 [Ailuropoda melanoleuca]
Length = 368
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 99/152 (65%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 75 LFAVKCGGCFEAVAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 134
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D + KS G + PKRPRTILTTQQRR
Sbjct: 135 EKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGATEDGKDHKRPKRPRTILTTQQRR 194
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 195 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 226
>gi|440898169|gb|ELR49722.1| LIM homeobox transcription factor 1-beta [Bos grunniens mutus]
Length = 392
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 100 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 159
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 160 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 219
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 220 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 254
>gi|3348118|gb|AAC27793.1| LIM homeodomain protein [Mus musculus]
Length = 372
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 87 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 146
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 147 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 206
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 207 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 241
>gi|297685372|ref|XP_002820264.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Pongo abelii]
Length = 383
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 87 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 146
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 147 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 206
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 207 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 241
>gi|219520075|gb|AAI43802.1| LMX1B protein [Homo sapiens]
Length = 383
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 87 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 146
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 147 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 206
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 207 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 241
>gi|149038965|gb|EDL93185.1| LIM homeobox transcription factor 1 beta [Rattus norvegicus]
Length = 372
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 87 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 146
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 147 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQNKGSGDDGKDPRRPKRPRTILTTQ 206
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 207 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 241
>gi|255759880|ref|NP_034855.2| LIM homeobox transcription factor 1-beta [Mus musculus]
gi|109112190|ref|XP_001097412.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Macaca mulatta]
gi|297685370|ref|XP_002820263.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Pongo abelii]
gi|395824199|ref|XP_003785358.1| PREDICTED: LIM homeobox transcription factor 1-beta [Otolemur
garnettii]
gi|403299811|ref|XP_003940668.1| PREDICTED: LIM homeobox transcription factor 1-beta [Saimiri
boliviensis boliviensis]
gi|410979114|ref|XP_003995931.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Felis catus]
gi|341940912|sp|O88609.2|LMX1B_MOUSE RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|3132909|gb|AAC39738.1| LIM homeodomain protein LMX1B [Homo sapiens]
gi|47479658|gb|AAH69601.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|85567565|gb|AAI12121.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|109731283|gb|AAI13492.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|111600533|gb|AAI19170.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|116138517|gb|AAI25470.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|119608048|gb|EAW87642.1| LIM homeobox transcription factor 1, beta, isoform CRA_b [Homo
sapiens]
gi|148676655|gb|EDL08602.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|312150934|gb|ADQ31979.1| LIM homeobox transcription factor 1, beta [synthetic construct]
gi|313882992|gb|ADR82982.1| LIM homeobox transcription factor 1, beta (LMX1B) [synthetic
construct]
Length = 372
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 87 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 146
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 147 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 206
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 207 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 241
>gi|332025158|gb|EGI65338.1| LIM homeobox transcription factor 1-beta [Acromyrmex echinatior]
Length = 400
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 96/137 (70%), Gaps = 5/137 (3%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
++ KC C EK+ +LVM+ + +FHV+CF C +CG L RG ++++QGQ CR D
Sbjct: 110 IFGVKCARCMEKISCSDLVMRPVSGLIFHVECFACCMCGQPLPRGAHYILRQGQPICRRD 169
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
+E E+ + DL+ ++ DGRRGPKRPRTILT+ QRR FKASFE+SPKPCRK
Sbjct: 170 FEHELFLNSPQDD----DLLDENRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRK 225
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA+DTGLSVR+VQ
Sbjct: 226 VREALAKDTGLSVRVVQ 242
>gi|297271296|ref|XP_002800229.1| PREDICTED: LIM homeobox transcription factor 1-beta [Macaca
mulatta]
Length = 385
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 87 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 146
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 147 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 206
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 207 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 241
>gi|355567904|gb|EHH24245.1| LIM/homeobox protein LMX1B [Macaca mulatta]
Length = 367
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 75 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 134
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 135 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 194
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 195 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 229
>gi|344271900|ref|XP_003407775.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Loxodonta africana]
Length = 406
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 169
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 170 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 229
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 264
>gi|2497672|sp|Q60564.1|LMX1B_MESAU RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|1432087|gb|AAB62320.1| LIM-homeodomain protein [Mesocricetus auratus]
Length = 369
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 77 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 136
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 137 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGGGDDGKDPRRPKRPRTILTTQ 196
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 197 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 231
>gi|292494913|ref|NP_001167617.1| LIM homeobox transcription factor 1-beta isoform 3 [Homo sapiens]
Length = 406
Score = 148 bits (373), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 169
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 170 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 229
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 264
>gi|29500723|gb|AAO74860.1| LMX1B [Canis lupus familiaris]
Length = 309
Score = 148 bits (373), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 28 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 87
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 88 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 147
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 148 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 182
>gi|390458375|ref|XP_002743346.2| PREDICTED: LIM homeobox transcription factor 1-beta [Callithrix
jacchus]
Length = 638
Score = 148 bits (373), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 102/159 (64%), Gaps = 27/159 (16%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 346 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 405
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSH---------------------DGR--RGPKRPRTI 98
EKE ++L + D S KS DG+ R PKRPRTI
Sbjct: 406 EKEKDLLSSVSP----DESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTI 461
Query: 99 LTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
LTTQQRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 462 LTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 500
>gi|431916082|gb|ELK16336.1| LIM homeobox transcription factor 1-alpha [Pteropus alecto]
Length = 374
Score = 148 bits (373), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/152 (52%), Positives = 97/152 (63%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ V+H+ CF C VC +LQ+G++FV+K GQL CR DY
Sbjct: 81 LFAVKCGGCFEAIAPNEFVMRAQKTVYHLGCFCCCVCERQLQKGDEFVLKDGQLLCRGDY 140
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D + KS G + PKRPRTILTTQQRR
Sbjct: 141 EKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGAAEDGKDHKRPKRPRTILTTQQRR 200
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 201 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 232
>gi|292494915|ref|NP_001167618.1| LIM homeobox transcription factor 1-beta isoform 2 [Homo sapiens]
gi|301761896|ref|XP_002916366.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 1
[Ailuropoda melanoleuca]
gi|344271902|ref|XP_003407776.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Loxodonta africana]
gi|410979112|ref|XP_003995930.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Felis catus]
gi|281340079|gb|EFB15663.1| hypothetical protein PANDA_004429 [Ailuropoda melanoleuca]
Length = 402
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 169
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 170 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 229
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 264
>gi|293345851|ref|XP_001078699.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Rattus norvegicus]
gi|293357761|ref|XP_001069713.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Rattus norvegicus]
Length = 395
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 169
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 170 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQNKGSGDDGKDPRRPKRPRTILTTQ 229
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 264
>gi|292494911|ref|NP_002307.2| LIM homeobox transcription factor 1-beta isoform 1 [Homo sapiens]
gi|301761898|ref|XP_002916367.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 2
[Ailuropoda melanoleuca]
gi|344271898|ref|XP_003407774.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Loxodonta africana]
gi|306921455|dbj|BAJ17807.1| LIM homeobox transcription factor 1, beta [synthetic construct]
gi|387541732|gb|AFJ71493.1| LIM homeobox transcription factor 1-beta isoform 1 [Macaca mulatta]
Length = 395
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 169
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 170 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 229
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 264
>gi|385862228|ref|NP_001245353.1| LIM homeobox transcription factor 1-beta [Sus scrofa]
Length = 379
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 87 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 146
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 147 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 206
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 207 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 241
>gi|354507888|ref|XP_003515986.1| PREDICTED: LIM homeobox transcription factor 1-beta-like, partial
[Cricetulus griseus]
Length = 243
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 102/159 (64%), Gaps = 27/159 (16%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 43 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 102
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSH---------------------DGR--RGPKRPRTI 98
EKE ++L + D S KS DG+ R PKRPRTI
Sbjct: 103 EKEKDLL----SSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTI 158
Query: 99 LTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
LTTQQRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 159 LTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 197
>gi|8247930|sp|O60663.2|LMX1B_HUMAN RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|3335524|gb|AAC27294.1| LIM homeodomain protein [Homo sapiens]
gi|119608047|gb|EAW87641.1| LIM homeobox transcription factor 1, beta, isoform CRA_a [Homo
sapiens]
Length = 379
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 87 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 146
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 147 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 206
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 207 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 241
>gi|47480835|gb|AAH69588.1| LMX1B protein [Homo sapiens]
Length = 377
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 85 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 145 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 204
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 205 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 239
>gi|417410318|gb|JAA51634.1| Putative lim homeobox transcription factor 1-beta, partial
[Desmodus rotundus]
Length = 391
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 106 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 165
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 166 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 225
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 226 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 260
>gi|397473155|ref|XP_003808084.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-beta [Pan paniscus]
Length = 402
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 169
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 170 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 229
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 264
>gi|417410392|gb|JAA51670.1| Putative lim homeobox transcription factor 1-beta, partial
[Desmodus rotundus]
Length = 398
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 106 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 165
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 166 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 225
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 226 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 260
>gi|296482212|tpg|DAA24327.1| TPA: LIM homeobox transcription factor 1, beta-like [Bos taurus]
Length = 1019
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 102/159 (64%), Gaps = 27/159 (16%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 727 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 786
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSH---------------------DGR--RGPKRPRTI 98
EKE ++L + D S KS DG+ R PKRPRTI
Sbjct: 787 EKEKDLL----SSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTI 842
Query: 99 LTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
LTTQQRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 843 LTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 881
>gi|359070468|ref|XP_002691651.2| PREDICTED: uncharacterized protein LOC100337389 [Bos taurus]
Length = 779
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 102/159 (64%), Gaps = 27/159 (16%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 487 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 546
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSH---------------------DGR--RGPKRPRTI 98
EKE ++L + D S KS DG+ R PKRPRTI
Sbjct: 547 EKEKDLL----SSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTI 602
Query: 99 LTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
LTTQQRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 603 LTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 641
>gi|301761900|ref|XP_002916368.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 3
[Ailuropoda melanoleuca]
Length = 406
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 169
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 170 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 229
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 264
>gi|348569787|ref|XP_003470679.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Cavia
porcellus]
Length = 402
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 169
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 170 EKEKDLLSSVSPDESDSVKSEDEDGDMKPTKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 229
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 264
>gi|126306172|ref|XP_001363612.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Monodelphis
domestica]
Length = 382
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 100/159 (62%), Gaps = 30/159 (18%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEML-----------------------QGYAQGIPFDLITSSKSHDGRRGPKRPRTI 98
EKE E+L G +G+ D K H + PKRPRTI
Sbjct: 149 EKERELLSLVSPVASDSGKSDDDDSLCKAGHGAGKGVAED----GKDH---KRPKRPRTI 201
Query: 99 LTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
LTTQQRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 202 LTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|395530698|ref|XP_003767425.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Sarcophilus
harrisii]
Length = 382
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 100/159 (62%), Gaps = 30/159 (18%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEML-----------------------QGYAQGIPFDLITSSKSHDGRRGPKRPRTI 98
EKE E+L G +G+ D K H + PKRPRTI
Sbjct: 149 EKERELLSLVSPVASDSGKSDDEDSLCKAGHGTGKGVAED----GKDH---KRPKRPRTI 201
Query: 99 LTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
LTTQQRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 202 LTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|410979116|ref|XP_003995932.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Felis catus]
Length = 406
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 169
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 170 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 229
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 264
>gi|345805844|ref|XP_003435360.1| PREDICTED: LIM homeobox transcription factor 1-beta [Canis lupus
familiaris]
Length = 487
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 195 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 254
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 255 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 314
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 315 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 349
>gi|410979118|ref|XP_003995933.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 4
[Felis catus]
Length = 382
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 87 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 146
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 147 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 206
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 207 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 241
>gi|358414621|ref|XP_003582878.1| PREDICTED: LIM homeobox transcription factor 1-beta [Bos taurus]
Length = 315
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 23 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 82
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 83 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 142
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 143 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 177
>gi|114626799|ref|XP_001141606.1| PREDICTED: LIM homeobox transcription factor 1-beta [Pan
troglodytes]
Length = 623
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 102/159 (64%), Gaps = 27/159 (16%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 331 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 390
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSH---------------------DGR--RGPKRPRTI 98
EKE ++L + D S KS DG+ R PKRPRTI
Sbjct: 391 EKEKDLL----SSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTI 446
Query: 99 LTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
LTTQQRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 447 LTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 485
>gi|327291350|ref|XP_003230384.1| PREDICTED: LIM homeobox transcription factor 1-beta-like, partial
[Anolis carolinensis]
Length = 185
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 99/154 (64%), Gaps = 18/154 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 1 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKSDY 60
Query: 62 EKEVEML----------------QGYAQGIPFDLITSSKSHDGR--RGPKRPRTILTTQQ 103
EKE ++L G + DG+ R PKRPRTILTTQQ
Sbjct: 61 EKEKDLLSSVSPDDSDSVKSDDEDGDVKPTKGQTNPGKGGDDGKDPRRPKRPRTILTTQQ 120
Query: 104 RRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 121 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 154
>gi|444721284|gb|ELW62028.1| LIM homeobox transcription factor 1-beta [Tupaia chinensis]
Length = 471
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 100/159 (62%), Gaps = 27/159 (16%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 6 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 65
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHD-----------------------GRRGPKRPRTI 98
EKE ++L + D S KS D R PKRPRTI
Sbjct: 66 EKEKDLLSSVSP----DESDSVKSEDEDGDMKPAKGQGSQNKGSGDDGKDPRRPKRPRTI 121
Query: 99 LTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
LTTQQRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 122 LTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 160
>gi|157118344|ref|XP_001653181.1| lim homeobox protein [Aedes aegypti]
gi|108883304|gb|EAT47529.1| AAEL001373-PA [Aedes aegypti]
Length = 391
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 96/143 (67%), Gaps = 10/143 (6%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
+ C GC E++ P+E+VM+ V+H+ CF+C C LQ+GE F ++ G+L C+ D EK+
Sbjct: 75 RDCYGCGERIAPNEMVMRAKALVYHLNCFLCYTCNRPLQKGEPFSLRAGKLICQHDLEKD 134
Query: 65 VE-----MLQGYAQGIPFD-----LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEIS 114
+ M + Q F L +S DGRRGPKRPRTILT+ QRR FKASF++S
Sbjct: 135 MYSTLHPMHPHHNQHTLFSEDDYLLEDGLRSRDGRRGPKRPRTILTSVQRRQFKASFDVS 194
Query: 115 PKPCRKVREGLARDTGLSVRIVQ 137
PKPCRKVRE LA+DTGLSVR+VQ
Sbjct: 195 PKPCRKVREALAKDTGLSVRVVQ 217
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC +K+ + + D +H QC +C +C +Q + +K +L+C+ DY
Sbjct: 18 CEGCGQKIKDRYFMKLSPDQYWHEQCLLCCIC--HIQLNQSCYMKNTKLYCKDDY 70
>gi|332230043|ref|XP_003264196.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Nomascus leucogenys]
Length = 416
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 98/161 (60%), Gaps = 25/161 (15%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 169
Query: 62 EKEVEMLQGY-------------------------AQGIPFDLITSSKSHDGRRGPKRPR 96
EKE ++L A+G S R PKRPR
Sbjct: 170 EKEKDLLSSVSPDESDSGEAWPELGAGLRDGERRPARGAGSQSKGSGDDGKDPRRPKRPR 229
Query: 97 TILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
TILTTQQRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 TILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 270
>gi|332230041|ref|XP_003264195.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Nomascus leucogenys]
Length = 401
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 98/161 (60%), Gaps = 25/161 (15%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 169
Query: 62 EKEVEMLQGY-------------------------AQGIPFDLITSSKSHDGRRGPKRPR 96
EKE ++L A+G S R PKRPR
Sbjct: 170 EKEKDLLSSVSPDESDSGEAWPELGAGLRDGERRPARGAGSQSKGSGDDGKDPRRPKRPR 229
Query: 97 TILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
TILTTQQRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 TILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 270
>gi|351707222|gb|EHB10141.1| LIM homeobox transcription factor 1-beta [Heterocephalus glaber]
Length = 395
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 99/155 (63%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 169
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 170 EKEKDLLSSVSPDESDSVKSEDEDGDTKPTKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 229
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE A +TGLSVR+VQ
Sbjct: 230 QRRAFKASFEVSSKPCRKVRETRAAETGLSVRVVQ 264
>gi|332230039|ref|XP_003264194.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Nomascus leucogenys]
Length = 408
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 98/161 (60%), Gaps = 25/161 (15%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 169
Query: 62 EKEVEMLQGY-------------------------AQGIPFDLITSSKSHDGRRGPKRPR 96
EKE ++L A+G S R PKRPR
Sbjct: 170 EKEKDLLSSVSPDESDSGEAWPELGAGLRDGERRPARGAGSQSKGSGDDGKDPRRPKRPR 229
Query: 97 TILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
TILTTQQRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 TILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 270
>gi|156543668|ref|XP_001605174.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Nasonia
vitripennis]
Length = 419
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/144 (50%), Positives = 96/144 (66%), Gaps = 11/144 (7%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLD--------NVFHVQCFVCVVCGSRLQRGEQFVIKQG 53
+Y KC C +K+ +ELVM+ + VFHV CFVC +CG +L RG ++++ G
Sbjct: 113 IYGAKCARCRQKIESNELVMRVPNCSQSALNGPVFHVDCFVCCICGDQLLRGAHYILRHG 172
Query: 54 QLFCRPDYEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEI 113
C+ +++ ++ + DL+ S+ DGRRGPKRPRTILT+ QRR FKASFEI
Sbjct: 173 LPLCKREFQNDIYNMNSPQDD---DLLDDSRPRDGRRGPKRPRTILTSVQRRQFKASFEI 229
Query: 114 SPKPCRKVREGLARDTGLSVRIVQ 137
SPKPCRKVRE LA+DTGLSVR+VQ
Sbjct: 230 SPKPCRKVREALAKDTGLSVRVVQ 253
>gi|340711972|ref|XP_003394539.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Bombus
terrestris]
Length = 402
Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 91/132 (68%), Gaps = 4/132 (3%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C EK+ + V++ VFHV+CF C +CG L G Q+ ++QGQ CR DYE E+
Sbjct: 116 KCARCMEKISCSDFVLRAPGLVFHVECFACCMCGQPLLPGTQYFLRQGQPICRRDYEHEL 175
Query: 66 EMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGL 125
+ DL+ ++ DGRRGPKRPRTILT+ QRR FKA+FE+SPKPCRKVRE L
Sbjct: 176 YLNSPQDD----DLLDENRPRDGRRGPKRPRTILTSAQRRQFKAAFEVSPKPCRKVREAL 231
Query: 126 ARDTGLSVRIVQ 137
A++TGLSVR+VQ
Sbjct: 232 AKETGLSVRVVQ 243
>gi|350402518|ref|XP_003486514.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Bombus
impatiens]
Length = 402
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 91/132 (68%), Gaps = 4/132 (3%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C EK+ + V++ VFHV+CF C +CG L G Q+ ++QGQ CR DYE E+
Sbjct: 116 KCARCMEKISCSDFVLRAPGLVFHVECFACCMCGQPLLPGTQYFLRQGQPICRRDYEHEL 175
Query: 66 EMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGL 125
+ DL+ ++ DGRRGPKRPRTILT+ QRR FKA+FE+SPKPCRKVRE L
Sbjct: 176 YLNSPQDD----DLLDENRPRDGRRGPKRPRTILTSAQRRQFKAAFEVSPKPCRKVREAL 231
Query: 126 ARDTGLSVRIVQ 137
A++TGLSVR+VQ
Sbjct: 232 AKETGLSVRVVQ 243
>gi|301609265|ref|XP_002934210.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Xenopus
(Silurana) tropicalis]
Length = 380
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 96/149 (64%), Gaps = 13/149 (8%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C + + P E VM+ NV+H+ CF C VC +LQ+G++FV+K GQL C+ DY
Sbjct: 89 LFAVKCGTCLDTITPSEFVMRAQKNVYHLGCFCCCVCDRQLQKGDEFVLKDGQLLCKSDY 148
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDGR--------RGPKRPRTILTTQQRRAFK 108
E+E ++L G D + K D + + PKRPRTILTTQQRRAFK
Sbjct: 149 ERERDLLSLVSPAASDSGKSEDEDDAGKFDDSKGPEDGKDQKRPKRPRTILTTQQRRAFK 208
Query: 109 ASFEISPKPCRKVREGLARDTGLSVRIVQ 137
ASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 209 ASFEVSSKPCRKVRETLAAETGLSVRVVQ 237
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C GC E++ D +++ D+++H QC C C L+ + +L+CR DYEK
Sbjct: 35 CEGC-ERVICDRFLLRISDSLWHEQCAQCCTCKEPLESS--CFYRDKKLYCRNDYEK--- 88
Query: 67 MLQGYAQGIPFDLITSSK 84
L G D IT S+
Sbjct: 89 -LFAVKCGTCLDTITPSE 105
>gi|47220025|emb|CAG12173.1| unnamed protein product [Tetraodon nigroviridis]
Length = 318
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 97/150 (64%), Gaps = 15/150 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+V+KC C + +G EL+M+ V+H+ CF C C RLQRG++FV+K+GQL CR DY
Sbjct: 13 LFVRKCSSCLQVIGRSELIMRVQGQVYHLGCFTCCECERRLQRGDEFVLKEGQLLCRMDY 72
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDG--------------RRGPKRPRTILTTQQRRAF 107
EKE EML + P + + S G + KRPRTILTTQQRRAF
Sbjct: 73 EKEREMLAAISP-TPTESVKSEDEDGGVGSGGGKGVDDGKEHKRSKRPRTILTTQQRRAF 131
Query: 108 KASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KASFE+S KPCRKVRE LA +TGL+VR+VQ
Sbjct: 132 KASFEVSAKPCRKVRETLAAETGLTVRVVQ 161
>gi|432889048|ref|XP_004075119.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Oryzias
latipes]
Length = 357
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 97/151 (64%), Gaps = 15/151 (9%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E++ +LV++ L+ V+H+ CF C +C +L +G++FV+K+GQLFC+ DY
Sbjct: 120 LFSAKCSGCLERIAATDLVIRALERVYHLSCFCCCICEHQLCKGDEFVLKEGQLFCKKDY 179
Query: 62 EKEVEMLQGYAQGIPFD------------LITSSKSHDGRRGP---KRPRTILTTQQRRA 106
+KE + D +T+ K D + P KRPRTILTTQQRR
Sbjct: 180 DKERNLSSTGGDNSDSDKSRDDFEAESEHFVTAVKGSDDNKDPFRPKRPRTILTTQQRRT 239
Query: 107 FKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
FKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 240 FKASFEVSSKPCRKVRETLAAETGLSVRVVQ 270
>gi|432868110|ref|XP_004071416.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Oryzias
latipes]
Length = 398
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/153 (51%), Positives = 99/153 (64%), Gaps = 21/153 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+V+KC C + +G EL+M+ L V+H+ CF C C RLQRG++FV+K+GQL CR DY
Sbjct: 109 LFVRKCSACLQVIGRSELIMRVLGQVYHLGCFSCCECERRLQRGDEFVLKEGQLLCRMDY 168
Query: 62 EKEVEMLQGYAQGIPFDLI-----------------TSSKSHDGRRGPKRPRTILTTQQR 104
EKE EML + P + + SK H + KRPRTILTTQQR
Sbjct: 169 EKEREMLAAISP-TPTESVKSEDEDGGGGSGSGKGGDESKEH---KRSKRPRTILTTQQR 224
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RAFKASFE+S KPCRKVRE LA +TGL+VR+VQ
Sbjct: 225 RAFKASFEVSAKPCRKVRETLAAETGLTVRVVQ 257
>gi|348508944|ref|XP_003442012.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Oreochromis niloticus]
Length = 368
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 96/150 (64%), Gaps = 15/150 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+V+KC C + +G EL+M+ L V+H+ CF C C RLQRG++FV+K+GQL CR DY
Sbjct: 85 LFVRKCSACLQVIGRSELIMRVLGQVYHLGCFSCCECERRLQRGDEFVLKEGQLLCRMDY 144
Query: 62 EKEVEMLQGYAQGIPFDLI--------------TSSKSHDGRRGPKRPRTILTTQQRRAF 107
EKE EML + P + + + KRPRTILTTQQRRAF
Sbjct: 145 EKEREMLAAISP-TPTESVKSEDEDGGGGSGGGKGGDEGKEHKRSKRPRTILTTQQRRAF 203
Query: 108 KASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KASFE+S KPCRKVRE LA +TGL+VR+VQ
Sbjct: 204 KASFEVSAKPCRKVRETLAAETGLTVRVVQ 233
>gi|410902629|ref|XP_003964796.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Takifugu
rubripes]
Length = 376
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 97/150 (64%), Gaps = 15/150 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+V+KC C + +G EL+M+ V+H+ CF C C RLQRG++FV+K+GQL CR DY
Sbjct: 86 LFVRKCSSCLQVIGRSELIMRVQGQVYHLGCFTCCECERRLQRGDEFVLKEGQLLCRMDY 145
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDG--------------RRGPKRPRTILTTQQRRAF 107
EKE EML + P + + S G + KRPRTILTTQQRRAF
Sbjct: 146 EKEREMLAAISP-TPTESVKSEDEDGGVGSGGGKGVDDGKEHKRSKRPRTILTTQQRRAF 204
Query: 108 KASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KASFE+S KPCRKVRE LA +TGL+VR+VQ
Sbjct: 205 KASFEVSAKPCRKVRETLAAETGLTVRVVQ 234
>gi|312370935|gb|EFR19233.1| hypothetical protein AND_22857 [Anopheles darlingi]
Length = 411
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 97/166 (58%), Gaps = 33/166 (19%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
+ C GC E++ P ELVM+ V+H+ CF+C C LQ+GE F I+ G+L C+ D EK+
Sbjct: 70 RDCYGCGERIAPSELVMRAKHLVYHLHCFLCYTCNRPLQKGEPFSIRAGKLVCQHDLEKD 129
Query: 65 ----VEMLQ----------------GYAQGI-------------PFDLITSSKSHDGRRG 91
M Q G A G+ + L ++ DGRRG
Sbjct: 130 FYGAAAMHQHHHGAGAGATGGVTSAGGAGGLHPPLHPVHMYGEDDYLLEDGLRTRDGRRG 189
Query: 92 PKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PKRPRTILT+ QRR FKASF++SPKPCRKVRE LA+DTGLSVR+VQ
Sbjct: 190 PKRPRTILTSAQRRQFKASFDVSPKPCRKVREALAKDTGLSVRVVQ 235
>gi|326930568|ref|XP_003211418.1| PREDICTED: LIM/homeobox protein LMX-1.2-like [Meleagris gallopavo]
Length = 281
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/144 (51%), Positives = 95/144 (65%), Gaps = 18/144 (12%)
Query: 12 EKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVEMLQ-- 69
EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DYEKE ++L
Sbjct: 2 EKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDYEKEKDLLSSV 61
Query: 70 --------------GYAQGIPFDLITSSKSHDGR--RGPKRPRTILTTQQRRAFKASFEI 113
G + + S DG+ R PKRPRTILTTQQRRAFKASFE+
Sbjct: 62 SPDDSDSVKSDDEDGDVKPTKGQVTQGKGSDDGKDPRRPKRPRTILTTQQRRAFKASFEV 121
Query: 114 SPKPCRKVREGLARDTGLSVRIVQ 137
S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 122 SSKPCRKVRETLAAETGLSVRVVQ 145
>gi|3046880|gb|AAC13544.1| LIM-homeodomain protein LMX1B/LMX1.2 [Homo sapiens]
Length = 161
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 95/147 (64%), Gaps = 19/147 (12%)
Query: 10 CSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVEMLQ 69
C EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DYEKE ++L
Sbjct: 1 CMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEKEKDLLS 60
Query: 70 GYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQQRRAFKAS 110
+ + + + D + R PKRPRTILTTQQRRAFKAS
Sbjct: 61 SVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKAS 120
Query: 111 FEISPKPCRKVREGLARDTGLSVRIVQ 137
FE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 121 FEVSSKPCRKVRETLAAETGLSVRVVQ 147
>gi|348504222|ref|XP_003439661.1| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Oreochromis niloticus]
Length = 456
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 95/157 (60%), Gaps = 25/157 (15%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ +C C K+ P E VM+ LD+V+H+ CF C VC +L +G++FV+K+GQL C+ DY
Sbjct: 86 LFAVECSNCLGKIAPTEFVMRALDSVYHLSCFCCCVCQHQLCKGDEFVLKEGQLLCKTDY 145
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRG---------------------PKRPRTILT 100
E+E + + D+ S KS D PKRPRTILT
Sbjct: 146 ERERTLFNTLSP----DITDSDKSEDEDSDVKSEKILLVRKCSDDSKEPLRPKRPRTILT 201
Query: 101 TQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
T Q+RAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 202 TPQQRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 238
>gi|344235434|gb|EGV91537.1| LIM homeobox transcription factor 1-beta [Cricetulus griseus]
Length = 233
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 94/145 (64%), Gaps = 19/145 (13%)
Query: 12 EKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVEMLQGY 71
EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DYEKE ++L
Sbjct: 2 EKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEKEKDLLSSV 61
Query: 72 AQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQQRRAFKASFE 112
+ + + + D + R PKRPRTILTTQQRRAFKASFE
Sbjct: 62 SPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFE 121
Query: 113 ISPKPCRKVREGLARDTGLSVRIVQ 137
+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 122 VSSKPCRKVRETLAAETGLSVRVVQ 146
>gi|324529696|gb|ADY49033.1| LIM homeobox transcription factor 1-alpha, partial [Ascaris suum]
Length = 179
Score = 134 bits (338), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 87/136 (63%), Gaps = 5/136 (3%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ +C C L P + V + L++ +H QCF CV C L++G+Q++I GQ+ CR DY
Sbjct: 41 LFSARCARCGITLQPTDFVFRCLNSTYHAQCFSCVYCNHPLKKGDQYLILDGQVICRADY 100
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E L Q +P +S R+ PKRPRTIL TQQRRAFK +FE S KPCRKV
Sbjct: 101 E-----LLLCNQPMPHAYFDIEQSESNRKTPKRPRTILNTQQRRAFKLAFEKSAKPCRKV 155
Query: 122 REGLARDTGLSVRIVQ 137
RE LA++TGLSVR+VQ
Sbjct: 156 REQLAKETGLSVRVVQ 171
>gi|405971991|gb|EKC36790.1| LIM homeobox transcription factor 1-beta [Crassostrea gigas]
Length = 343
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C GC + P E VM+ V+H QCF C+ CG +L++G+ IK GQLFC D+EKE+
Sbjct: 70 CNGCGMFVIPTEFVMRAKGYVYHQQCFNCIECGQQLRQGDHCAIKDGQLFCGIDFEKEMN 129
Query: 67 MLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLA 126
M+ + D +S G+ PKRPRTILTT QRR FK++FE++PKPCRKVRE LA
Sbjct: 130 MMALSPRSDGSDSYEDGESDCGKH-PKRPRTILTTSQRRKFKSAFELNPKPCRKVREQLA 188
Query: 127 RDTGLSVRIVQ 137
+TGLSVR+VQ
Sbjct: 189 AETGLSVRVVQ 199
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
D +++ +D +H QC VC VC ++L R + Q +C+ DY+K
Sbjct: 19 DRFLLRVMDLPWHEQCVVCSVCQTQLTR--TCFHRNRQFYCKNDYDK 63
>gi|348505058|ref|XP_003440078.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Oreochromis niloticus]
Length = 361
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 91/150 (60%), Gaps = 14/150 (9%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFC-RPD 60
L+ +C GC+E + P ELVM+ VFH++CF C VC RLQ G++ V+++GQL C R
Sbjct: 71 LFAVRCAGCTEAISPAELVMRAGAAVFHLRCFTCSVCSCRLQTGDRCVLREGQLLCAREG 130
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGR-------------RGPKRPRTILTTQQRRAF 107
Y + + G D + GR + PKRPRTILTTQQRR F
Sbjct: 131 YHQCLASPSSSETGKSDDEDEEVEEESGRITGRKVKSDDVESKRPKRPRTILTTQQRRTF 190
Query: 108 KASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 191 KASFEVSSKPCRKVRETLAAETGLSVRVVQ 220
>gi|405971990|gb|EKC36789.1| LIM homeobox transcription factor 1-beta [Crassostrea gigas]
Length = 319
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 87/137 (63%), Gaps = 2/137 (1%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ +C GC + P ELV + N +H+ CF CV CG LQ G +F I+ GQ+FCR D+
Sbjct: 69 LFRGRCSGCGFSINPHELVRRVYSNTYHLPCFRCVECGHVLQDGNEFYIRDGQIFCRYDH 128
Query: 62 EKEVEMLQGYAQGIPFDLITSSK-SHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
+KE + ++ + D + D R KRPRTILTT QRR FK +FE +PKPCRK
Sbjct: 129 DKEFH-IPSFSPKVDEDSDSYEDFDLDVDRQAKRPRTILTTSQRRKFKQAFEANPKPCRK 187
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA +TGL++R+VQ
Sbjct: 188 VREQLAAETGLTIRVVQ 204
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
++ + C GC + D+ + K DNV+H C C +C RL K G L+C+ DY
Sbjct: 10 IHEETCAGCGYPI-RDKYLFKINDNVWHENCLQCAIC--RLSLSGTCYSKNGHLYCKSDY 66
Query: 62 EKEVEMLQGYAQGIPFDL 79
+K + +G G F +
Sbjct: 67 DK---LFRGRCSGCGFSI 81
>gi|339261154|ref|XP_003368046.1| LIM homeobox transcription factor 1 alpha [Trichinella spiralis]
gi|316964817|gb|EFV49755.1| LIM homeobox transcription factor 1 alpha [Trichinella spiralis]
Length = 260
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 88/140 (62%), Gaps = 5/140 (3%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
+Y KC C+ L P + V ++ D +FH+ CF C +CG LQ G+++V + Q+ CR D+
Sbjct: 7 IYGSKCAKCALPLNPSDFVQRSQDRIFHMNCFGCSICGKLLQPGDEYVRQNEQILCRGDF 66
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E V Y F L H ++ KRPRTILT+ QR+ FKASFE+S KPCRKV
Sbjct: 67 ESLVH--NPYEDA--FKLGPFRHGH-HKKTLKRPRTILTSHQRKTFKASFEVSAKPCRKV 121
Query: 122 REGLARDTGLSVRIVQSRPI 141
RE LA++TGLSVR+VQ + +
Sbjct: 122 REALAKETGLSVRVVQMKKL 141
>gi|410921390|ref|XP_003974166.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Takifugu
rubripes]
Length = 354
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 88/158 (55%), Gaps = 23/158 (14%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFC-RPD 60
L+ C GC+E + ELVM+ VFH+ CF C VC RLQ G++ V ++GQL C R D
Sbjct: 61 LFAVHCGGCAEAISHTELVMRAGAAVFHLHCFTCSVCSCRLQTGDRCVFREGQLLCARED 120
Query: 61 YEKEVEMLQGYAQGIPFD---------------------LITSSKSHDGRRGPKRPRTIL 99
Y + + G D + D +R PKRPRTIL
Sbjct: 121 YHRCLASPTSSYTGTSCDGDDEDEEEEKEEEEESAAAADRTARTAEQDSKR-PKRPRTIL 179
Query: 100 TTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
TTQQRR FKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 180 TTQQRRTFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 217
>gi|339247641|ref|XP_003375454.1| LIM/homeobox protein Lhx3 [Trichinella spiralis]
gi|316971202|gb|EFV55014.1| LIM/homeobox protein Lhx3 [Trichinella spiralis]
Length = 305
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 88/140 (62%), Gaps = 5/140 (3%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
+Y KC C+ L P + V ++ D +FH+ CF C +CG LQ G+++V + Q+ CR D+
Sbjct: 52 IYGSKCAKCALPLNPSDFVQRSQDRIFHMNCFGCSICGKLLQPGDEYVRQNEQILCRGDF 111
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E V Y F L H ++ KRPRTILT+ QR+ FKASFE+S KPCRKV
Sbjct: 112 ESLVH--NPYEDA--FKLGPFRHGHH-KKTLKRPRTILTSHQRKTFKASFEVSAKPCRKV 166
Query: 122 REGLARDTGLSVRIVQSRPI 141
RE LA++TGLSVR+VQ + +
Sbjct: 167 REALAKETGLSVRVVQMKKL 186
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++ N +H +C VC +CG L ++ G++ CR DY
Sbjct: 5 DRFMLNVAGNFWHERCLVCSICGLELSLAPSCFLRDGKVLCRGDY 49
>gi|432856535|ref|XP_004068463.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Oryzias
latipes]
Length = 348
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 89/148 (60%), Gaps = 12/148 (8%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFC-RPD 60
L+ C GC+E + P ELVM+ VFH+ CF C VC L+ G++ +++ G+L C R D
Sbjct: 70 LFAVHCGGCAEAISPSELVMRAGAAVFHLSCFTCSVCFHHLKTGDRCILQDGRLLCARED 129
Query: 61 YEKEVEMLQGYAQGIPFD----------LITSSKSHD-GRRGPKRPRTILTTQQRRAFKA 109
Y + G D + +SHD + PKRPRTILTTQQRR FKA
Sbjct: 130 YHQLQASPPSSDIGKSGDDEEEEPSAKVMDKPGRSHDQENKRPKRPRTILTTQQRRTFKA 189
Query: 110 SFEISPKPCRKVREGLARDTGLSVRIVQ 137
SFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 190 SFEVSSKPCRKVRETLAAETGLSVRVVQ 217
>gi|345326124|ref|XP_001508297.2| PREDICTED: hypothetical protein LOC100077000 [Ornithorhynchus
anatinus]
Length = 553
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 83/135 (61%), Gaps = 18/135 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 263 LFAAKCSGCLEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKSDY 322
Query: 62 EKEVEMLQ----------------GYAQGIPFDLITSSKSHDGR--RGPKRPRTILTTQQ 103
EKE ++L G + S DG+ R PKRPRTILTTQQ
Sbjct: 323 EKEKDLLSSVSPDESDSVKSDDEDGDVKPTKGQASQGKGSDDGKDPRRPKRPRTILTTQQ 382
Query: 104 RRAFKASFEISPKPC 118
RRAFKASFE+S KPC
Sbjct: 383 RRAFKASFEVSSKPC 397
>gi|402592128|gb|EJW86057.1| hypothetical protein WUBG_03029, partial [Wuchereria bancrofti]
Length = 218
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 84/136 (61%), Gaps = 5/136 (3%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC+ C + + V + +++H+ CF C CG ++G+ +V+ GQ+ CRPDY
Sbjct: 1 LFGVKCVRCGLPVRSTDYVYRVFASIYHLHCFKCFCCGHLFKKGDHYVLVDGQIICRPDY 60
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + + FD ++ R+ PKRPRTIL TQQR+AFK +FE + KPCRKV
Sbjct: 61 EHLLCQPPICQSHLYFD-----QNDSNRKTPKRPRTILNTQQRKAFKLAFEKTSKPCRKV 115
Query: 122 REGLARDTGLSVRIVQ 137
RE LA++T LSVR+VQ
Sbjct: 116 REQLAKETNLSVRVVQ 131
>gi|426223032|ref|XP_004005683.1| PREDICTED: LIM homeobox transcription factor 1-beta [Ovis aries]
Length = 405
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 84/141 (59%), Gaps = 19/141 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 116 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 175
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 176 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 235
Query: 103 QRRAFKASFEISPKPCRKVRE 123
QRRAFKASFE+S K C RE
Sbjct: 236 QRRAFKASFEVSSKLCLVGRE 256
>gi|312089563|ref|XP_003146293.1| hypothetical protein LOAG_10721 [Loa loa]
gi|307758541|gb|EFO17775.1| hypothetical protein LOAG_10721 [Loa loa]
Length = 212
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 80/123 (65%), Gaps = 11/123 (8%)
Query: 18 ELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK---EVEMLQGYAQG 74
+ V + +++H+ CF C CG ++G+ +++ GQ+ CRPDYE + M Q +
Sbjct: 11 DYVYRVFASIYHLHCFKCFCCGHLFKKGDHYMLLDGQIICRPDYEHLLCQAPMCQSH--- 67
Query: 75 IPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVR 134
+ FD ++ R+ PKRPRTIL TQQR+AFK +FE + KPCRKVRE LA++T LSVR
Sbjct: 68 LYFD-----QNDSNRKTPKRPRTILNTQQRKAFKLAFEKTSKPCRKVREQLAKETNLSVR 122
Query: 135 IVQ 137
+VQ
Sbjct: 123 VVQ 125
>gi|341898967|gb|EGT54902.1| CBN-LIM-6 protein [Caenorhabditis brenneri]
Length = 316
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 80/137 (58%), Gaps = 1/137 (0%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
MLY K+C C+ L P ++V + +H CF C+ C G+++ + G++FCR D
Sbjct: 97 MLYGKRCRRCTAILLPTDIVHRVHYMYYHAHCFSCLSCQGPFNLGDEYHVFDGEVFCRND 156
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
++ + P L + +S R+ PKRPRTIL QQRR FK +FE S KP RK
Sbjct: 157 FQSLCNYQNTISTADPM-LDEAVRSDIHRKTPKRPRTILNAQQRRQFKTAFERSSKPSRK 215
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA +TGLSVR+VQ
Sbjct: 216 VREQLANETGLSVRVVQ 232
>gi|157127146|ref|XP_001661055.1| lim homeobox protein [Aedes aegypti]
gi|108873020|gb|EAT37245.1| AAEL010744-PA [Aedes aegypti]
Length = 459
Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 57/136 (41%), Positives = 82/136 (60%), Gaps = 11/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC C + P ++V + DNV+H+QCF+C +C +L G++F +I+ G+L C+PDY
Sbjct: 118 YGTKCAACDLGIPPTQVVRRAQDNVYHLQCFMCSMCSRQLNTGDEFYLIEDGKLICKPDY 177
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E A+G L S S DG KRPRT +T +Q K+++ SPKP R V
Sbjct: 178 EA------AKAKG----LYLSDGSLDGESSNKRPRTTITAKQLETLKSAYNSSPKPARHV 227
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 228 REQLSQDTGLDMRVVQ 243
>gi|157115167|ref|XP_001652548.1| lim homeobox protein [Aedes aegypti]
gi|108876992|gb|EAT41217.1| AAEL007120-PA [Aedes aegypti]
Length = 459
Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 57/136 (41%), Positives = 82/136 (60%), Gaps = 11/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC C + P ++V + DNV+H+QCF+C +C +L G++F +I+ G+L C+PDY
Sbjct: 118 YGTKCAACDLGIPPTQVVRRAQDNVYHLQCFMCSMCSRQLNTGDEFYLIEDGKLICKPDY 177
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E A+G L S S DG KRPRT +T +Q K+++ SPKP R V
Sbjct: 178 EA------AKAKG----LYLSDGSLDGESSNKRPRTTITAKQLETLKSAYNSSPKPARHV 227
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 228 REQLSQDTGLDMRVVQ 243
>gi|170055943|ref|XP_001863808.1| lim homeobox protein [Culex quinquefasciatus]
gi|167875776|gb|EDS39159.1| lim homeobox protein [Culex quinquefasciatus]
Length = 456
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 56/136 (41%), Positives = 82/136 (60%), Gaps = 11/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC C + P ++V + DNV+H+QCF+C +C +L G++F +++ G+L C+PDY
Sbjct: 121 YGTKCAACDLGIPPTQVVRRAQDNVYHLQCFMCSMCSRQLNTGDEFYLMEDGKLVCKPDY 180
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E A+G L S S DG KRPRT +T +Q K+++ SPKP R V
Sbjct: 181 EA------AKAKG----LYLSDGSLDGESSNKRPRTTITAKQLETLKSAYNSSPKPARHV 230
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 231 REQLSQDTGLDMRVVQ 246
>gi|268576445|ref|XP_002643202.1| C. briggsae CBR-LIM-6 protein [Caenorhabditis briggsae]
Length = 257
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
ML+ K+C C L ++V + +H QCF C C G+++ + G++FCR D
Sbjct: 40 MLFGKRCRRCMTVLSSTDIVHRVHYMYYHAQCFNCCSCQGPFNLGDEYHVFDGEVFCRND 99
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
Y+ + G + D S+ H R+ PKRPRTIL QQRR FK +FE S KP RK
Sbjct: 100 YQAMCDF--GTSSESMLDDAVQSEIH--RKTPKRPRTILNAQQRRQFKTAFERSSKPSRK 155
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA +TGLSVR+VQ
Sbjct: 156 VREQLANETGLSVRVVQ 172
>gi|392925293|ref|NP_001256980.1| Protein LIM-6, isoform b [Caenorhabditis elegans]
gi|351020895|emb|CCD62868.1| Protein LIM-6, isoform b [Caenorhabditis elegans]
Length = 316
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 82/138 (59%), Gaps = 4/138 (2%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
MLY K+C C L P ++V + +H QCF C C G+++ + G++FCR D
Sbjct: 97 MLYGKRCRRCMTLLLPTDIVHRVHFMYYHAQCFSCCSCQRPFNLGDEYHVFDGEVFCRND 156
Query: 61 YEKEVEMLQGYAQGIPF-DLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
Y+ + Q + P + + S+ H R+ PKRPRTIL QQRR FK +FE S KP R
Sbjct: 157 YQS-ICNFQTISNPDPLMEEVVRSEIH--RKTPKRPRTILNAQQRRQFKTAFERSSKPSR 213
Query: 120 KVREGLARDTGLSVRIVQ 137
KVRE LA +TGLSVR+VQ
Sbjct: 214 KVREQLANETGLSVRVVQ 231
>gi|392925295|ref|NP_001256981.1| Protein LIM-6, isoform a [Caenorhabditis elegans]
gi|351020894|emb|CCD62867.1| Protein LIM-6, isoform a [Caenorhabditis elegans]
Length = 310
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 82/138 (59%), Gaps = 4/138 (2%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
MLY K+C C L P ++V + +H QCF C C G+++ + G++FCR D
Sbjct: 97 MLYGKRCRRCMTLLLPTDIVHRVHFMYYHAQCFSCCSCQRPFNLGDEYHVFDGEVFCRND 156
Query: 61 YEKEVEMLQGYAQGIPF-DLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
Y+ + Q + P + + S+ H R+ PKRPRTIL QQRR FK +FE S KP R
Sbjct: 157 YQ-SICNFQTISNPDPLMEEVVRSEIH--RKTPKRPRTILNAQQRRQFKTAFERSSKPSR 213
Query: 120 KVREGLARDTGLSVRIVQ 137
KVRE LA +TGLSVR+VQ
Sbjct: 214 KVREQLANETGLSVRVVQ 231
>gi|70887599|ref|NP_001020669.1| LIM homeobox transcription factor 1, alpha [Danio rerio]
Length = 366
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 95/151 (62%), Gaps = 15/151 (9%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
L+V +C GCSE + P ELVM+ + VFH++CF C VCG RLQ+G+ V++ LFC
Sbjct: 80 LFVVRCQGCSEIISPSELVMRAQGSAVFHLRCFCCCVCGCRLQKGDHCVLRGDGLFCATH 139
Query: 61 YEKEVEMLQGYAQG----------IPFDLITSSKSHDG----RRGPKRPRTILTTQQRRA 106
+ ++ G +L T+ +S+ + PKRPRTILTTQQRRA
Sbjct: 140 FHNQLASPTSSDSGKSEDIEEDNDDEDNLKTAGESNITGDVEHKRPKRPRTILTTQQRRA 199
Query: 107 FKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
FKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 200 FKASFEVSSKPCRKVRETLAAETGLSVRVVQ 230
>gi|308489722|ref|XP_003107054.1| CRE-LIM-6 protein [Caenorhabditis remanei]
gi|308252942|gb|EFO96894.1| CRE-LIM-6 protein [Caenorhabditis remanei]
Length = 314
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 78/137 (56%), Gaps = 4/137 (2%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
ML+ K+C C L P ++V + +H QCF C C G+++ + ++FCR D
Sbjct: 97 MLFGKRCRRCMILLSPTDIVHRVHYMYYHAQCFSCCSCQGPFNLGDEYHVFDSEVFCRND 156
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
Y+ G + + S+ H R+ PKRPRTIL QQRR FK +FE S KP RK
Sbjct: 157 YQAICNF--GTTSESMLEDVVRSEHH--RKTPKRPRTILNAQQRRQFKTAFERSSKPSRK 212
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA +TGLSVR+VQ
Sbjct: 213 VREQLANETGLSVRVVQ 229
>gi|258504145|gb|ACV72772.1| LIM-6 [Caenorhabditis remanei]
Length = 263
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 78/137 (56%), Gaps = 4/137 (2%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
ML+ K+C C L P ++V + +H QCF C C G+++ + ++FCR D
Sbjct: 64 MLFGKRCRRCMILLSPTDIVHRVHYMYYHAQCFSCCSCQGPFNLGDEYHVFDSEVFCRND 123
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
Y+ G + + S+ H R+ PKRPRTIL QQRR FK +FE S KP RK
Sbjct: 124 YQAICNF--GTTSESMLEDVVRSEHH--RKTPKRPRTILNAQQRRQFKTAFERSSKPSRK 179
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA +TGLSVR+VQ
Sbjct: 180 VREQLANETGLSVRVVQ 196
>gi|258504133|gb|ACV72766.1| LIM-6 [Caenorhabditis remanei]
Length = 263
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 78/137 (56%), Gaps = 4/137 (2%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
ML+ K+C C L P ++V + +H QCF C C G+++ + ++FCR D
Sbjct: 64 MLFGKRCRRCMILLSPTDIVHRVHYMYYHAQCFSCCSCQGPFNLGDEYHVFDSEVFCRND 123
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
Y+ G + + S+ H R+ PKRPRTIL QQRR FK +FE S KP RK
Sbjct: 124 YQAICNF--GTTSESMLEDVVRSEHH--RKTPKRPRTILNAQQRRQFKTAFERSSKPSRK 179
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA +TGLSVR+VQ
Sbjct: 180 VREQLANETGLSVRVVQ 196
>gi|258504135|gb|ACV72767.1| LIM-6 [Caenorhabditis remanei]
gi|258504137|gb|ACV72768.1| LIM-6 [Caenorhabditis remanei]
gi|258504139|gb|ACV72769.1| LIM-6 [Caenorhabditis remanei]
gi|258504141|gb|ACV72770.1| LIM-6 [Caenorhabditis remanei]
gi|258504143|gb|ACV72771.1| LIM-6 [Caenorhabditis remanei]
gi|258504147|gb|ACV72773.1| LIM-6 [Caenorhabditis remanei]
Length = 263
Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 78/137 (56%), Gaps = 4/137 (2%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
ML+ K+C C L P ++V + +H QCF C C G+++ + ++FCR D
Sbjct: 64 MLFGKRCRRCMILLSPTDIVHRVHYMYYHAQCFSCCSCQGPFNLGDEYHVFDSEVFCRND 123
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
Y+ G + + S+ H R+ PKRPRTIL QQRR FK +FE S KP RK
Sbjct: 124 YQAICNF--GTTSESMLEDVVRSEHH--RKTPKRPRTILNAQQRRQFKTAFERSSKPSRK 179
Query: 121 VREGLARDTGLSVRIVQ 137
VRE LA +TGLSVR+VQ
Sbjct: 180 VREQLANETGLSVRVVQ 196
>gi|449688145|ref|XP_004211659.1| PREDICTED: homeobox protein unc-4-like [Hydra magnipapillata]
Length = 352
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 81/142 (57%), Gaps = 25/142 (17%)
Query: 21 MKTLD-NVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV-----------EML 68
MK LD N+FH+ CF C CG L++GE++ K +L C+ D+ E + +
Sbjct: 1 MKVLDTNLFHIDCFKCQNCGKMLEKGEEYAFKNQKLLCKADFNTEHICDNDETKHDGDDM 60
Query: 69 QGYAQGIPFDL-------------ITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISP 115
+ I D TS S++ G KRPRTILTTQQR+ FK +FE +P
Sbjct: 61 KHDGDDIKHDADVFSSSDDSDSMSTTSPSSYEKNSGYKRPRTILTTQQRQNFKTAFEQAP 120
Query: 116 KPCRKVREGLARDTGLSVRIVQ 137
KPCRK+RE L+++TGLSVR+VQ
Sbjct: 121 KPCRKIREKLSKETGLSVRVVQ 142
>gi|158299816|ref|XP_319836.3| AGAP009088-PA [Anopheles gambiae str. PEST]
gi|157013700|gb|EAA14726.3| AGAP009088-PA [Anopheles gambiae str. PEST]
Length = 389
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 80/136 (58%), Gaps = 11/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQG-QLFCRPDY 61
Y KC C + P ++V + DNV+H+QCF+C +C +L G++F + + +L C+PDY
Sbjct: 96 YGTKCAACDLGIPPTQVVRRAQDNVYHLQCFMCSMCSRQLNTGDEFYLMEDCKLICKPDY 155
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E A+G L S S DG KRPRT +T +Q K+++ SPKP R V
Sbjct: 156 EA------AKAKG----LYLSDGSLDGESSNKRPRTTITAKQLETLKSAYNSSPKPARHV 205
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 206 REQLSQDTGLDMRVVQ 221
>gi|312374311|gb|EFR21889.1| hypothetical protein AND_16082 [Anopheles darlingi]
Length = 568
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 55/136 (40%), Positives = 80/136 (58%), Gaps = 11/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRG-EQFVIKQGQLFCRPDY 61
Y KC C + P ++V + DNV+H+QCF+C +C +L G E ++++ +L C+PDY
Sbjct: 230 YGTKCAACDLGIPPTQVVRRAQDNVYHLQCFMCSMCSRQLNTGDEYYLMEDCKLICKPDY 289
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E A+G L S S DG KRPRT +T +Q K+++ SPKP R V
Sbjct: 290 EA------AKAKG----LYLSDGSLDGESSNKRPRTTITAKQLETLKSAYNSSPKPARHV 339
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 340 REQLSQDTGLDMRVVQ 355
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+ KC GC E L D ++K D +H +C C C R+Q E+ + GQLFC+ D+ K
Sbjct: 172 IPKCGGCHE-LILDRFILKVSDRTWHAKCLQCSEC--RVQLNEKCFARNGQLFCKDDFFK 228
>gi|225581041|gb|ACN94618.1| GA10505 [Drosophila miranda]
Length = 499
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 80/136 (58%), Gaps = 12/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC C + P ++V + DNV+H+QCF+C +C L G++F +++ +L C+ DY
Sbjct: 153 YGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKRDY 212
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + A+G+ D S DG + KRPRT +T +Q K ++ SPKP R V
Sbjct: 213 E------EAKAKGLYLD-----GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHV 261
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 262 REQLSQDTGLDMRVVQ 277
>gi|442628307|ref|NP_001260559.1| Lim3, isoform G [Drosophila melanogaster]
gi|440213916|gb|AGB93094.1| Lim3, isoform G [Drosophila melanogaster]
Length = 555
Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 80/136 (58%), Gaps = 12/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC C + P ++V + DNV+H+QCF+C +C L G++F +++ +L C+ DY
Sbjct: 177 YGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKRDY 236
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + A+G+ D S DG + KRPRT +T +Q K ++ SPKP R V
Sbjct: 237 E------EAKAKGLYLD-----GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHV 285
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 286 REQLSQDTGLDMRVVQ 301
>gi|28316900|gb|AAO39472.1| RE70568p [Drosophila melanogaster]
Length = 523
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 80/136 (58%), Gaps = 12/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC C + P ++V + DNV+H+QCF+C +C L G++F +++ +L C+ DY
Sbjct: 180 YGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKRDY 239
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + A+G+ D S DG + KRPRT +T +Q K ++ SPKP R V
Sbjct: 240 E------EAKAKGLYLD-----GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHV 288
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 289 REQLSQDTGLDMRVVQ 304
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+ KC GC E L D ++K L+ +H +C C C +L ++ + GQLFC+ D+ K
Sbjct: 119 IPKCGGCHE-LILDRFILKVLERTWHAKCLQCSECHGQLN--DKCFARNGQLFCKEDFFK 175
>gi|24585132|ref|NP_724161.1| Lim3, isoform B [Drosophila melanogaster]
gi|386769865|ref|NP_001246085.1| Lim3, isoform C [Drosophila melanogaster]
gi|386769867|ref|NP_001246086.1| Lim3, isoform D [Drosophila melanogaster]
gi|386769871|ref|NP_001246088.1| Lim3, isoform F [Drosophila melanogaster]
gi|22946804|gb|AAF53758.2| Lim3, isoform B [Drosophila melanogaster]
gi|124248338|gb|ABM92789.1| FI01025p [Drosophila melanogaster]
gi|383291570|gb|AFH03759.1| Lim3, isoform C [Drosophila melanogaster]
gi|383291571|gb|AFH03760.1| Lim3, isoform D [Drosophila melanogaster]
gi|383291573|gb|AFH03762.1| Lim3, isoform F [Drosophila melanogaster]
Length = 520
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 80/136 (58%), Gaps = 12/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC C + P ++V + DNV+H+QCF+C +C L G++F +++ +L C+ DY
Sbjct: 177 YGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKRDY 236
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + A+G+ D S DG + KRPRT +T +Q K ++ SPKP R V
Sbjct: 237 E------EAKAKGLYLD-----GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHV 285
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 286 REQLSQDTGLDMRVVQ 301
>gi|195345019|ref|XP_002039073.1| GM17030 [Drosophila sechellia]
gi|194134203|gb|EDW55719.1| GM17030 [Drosophila sechellia]
Length = 523
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 80/136 (58%), Gaps = 12/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC C + P ++V + DNV+H+QCF+C +C L G++F +++ +L C+ DY
Sbjct: 182 YGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKRDY 241
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + A+G+ D S DG + KRPRT +T +Q K ++ SPKP R V
Sbjct: 242 E------EAKAKGLYLD-----GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHV 290
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 291 REQLSQDTGLDMRVVQ 306
>gi|195398039|ref|XP_002057632.1| GJ17996 [Drosophila virilis]
gi|194141286|gb|EDW57705.1| GJ17996 [Drosophila virilis]
Length = 545
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 80/136 (58%), Gaps = 12/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC C + P ++V + DNV+H+QCF+C +C L G++F +++ +L C+ DY
Sbjct: 181 YGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKRDY 240
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + A+G+ D S DG + KRPRT +T +Q K ++ SPKP R V
Sbjct: 241 E------EAKAKGLYLD-----GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHV 289
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 290 REQLSQDTGLDMRVVQ 305
>gi|402897927|ref|XP_003911988.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-beta [Papio anubis]
Length = 406
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 88/159 (55%), Gaps = 23/159 (14%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 169
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTI ++
Sbjct: 170 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTIPSSP 229
Query: 103 QRRAFKASF----EISPKPCRKVREGLARDTGLSVRIVQ 137
R A+ ++ P +VRE LA +TGLSVR+VQ
Sbjct: 230 XTRHLPAAAPGWPDLIPLSLGQVRETLAAETGLSVRVVQ 268
>gi|357611533|gb|EHJ67530.1| lim homeobox protein [Danaus plexippus]
Length = 481
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 77/136 (56%), Gaps = 15/136 (11%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC GC + + P ++V + +V+H++CF C C L G++F +++ G+L C+PDY
Sbjct: 191 YGTKCAGCGQGIPPTQVVRRAQAHVYHLRCFACAACARTLNTGDEFYLMEDGKLVCKPDY 250
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E +G S DG KRPRT +T +Q K+++ SPKP R V
Sbjct: 251 EAARAKGEG--------------SLDGDAASKRPRTTITAKQLETLKSAYSSSPKPARHV 296
Query: 122 REGLARDTGLSVRIVQ 137
RE LA+DTGL +R+VQ
Sbjct: 297 REQLAQDTGLDMRVVQ 312
>gi|194759358|ref|XP_001961916.1| GF15212 [Drosophila ananassae]
gi|190615613|gb|EDV31137.1| GF15212 [Drosophila ananassae]
Length = 444
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 80/136 (58%), Gaps = 12/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC C + P ++V + DNV+H+QCF+C +C L G++F +++ +L C+ DY
Sbjct: 97 YGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKRDY 156
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + A+G+ D S DG + KRPRT +T +Q K ++ SPKP R V
Sbjct: 157 E------EAKAKGLYLD-----GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHV 205
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 206 REQLSQDTGLDMRVVQ 221
>gi|195115252|ref|XP_002002178.1| GI17237 [Drosophila mojavensis]
gi|193912753|gb|EDW11620.1| GI17237 [Drosophila mojavensis]
Length = 449
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 80/136 (58%), Gaps = 12/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC C + P ++V + DNV+H+QCF+C +C L G++F +++ +L C+ DY
Sbjct: 97 YGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKRDY 156
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + A+G+ D S DG + KRPRT +T +Q K ++ SPKP R V
Sbjct: 157 E------EAKAKGLYLD-----GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHV 205
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 206 REQLSQDTGLDMRVVQ 221
>gi|195484367|ref|XP_002090664.1| GE12672 [Drosophila yakuba]
gi|194176765|gb|EDW90376.1| GE12672 [Drosophila yakuba]
Length = 442
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 80/136 (58%), Gaps = 12/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC C + P ++V + DNV+H+QCF+C +C L G++F +++ +L C+ DY
Sbjct: 97 YGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKRDY 156
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + A+G+ D S DG + KRPRT +T +Q K ++ SPKP R V
Sbjct: 157 E------EAKAKGLYLD-----GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHV 205
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 206 REQLSQDTGLDMRVVQ 221
>gi|194879752|ref|XP_001974294.1| GG21652 [Drosophila erecta]
gi|190657481|gb|EDV54694.1| GG21652 [Drosophila erecta]
Length = 442
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 80/136 (58%), Gaps = 12/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC C + P ++V + DNV+H+QCF+C +C L G++F +++ +L C+ DY
Sbjct: 97 YGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKRDY 156
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + A+G+ D S DG + KRPRT +T +Q K ++ SPKP R V
Sbjct: 157 E------EAKAKGLYLD-----GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHV 205
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 206 REQLSQDTGLDMRVVQ 221
>gi|195438224|ref|XP_002067037.1| GK24239 [Drosophila willistoni]
gi|194163122|gb|EDW78023.1| GK24239 [Drosophila willistoni]
Length = 448
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 80/136 (58%), Gaps = 12/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC C + P ++V + DNV+H+QCF+C +C L G++F +++ +L C+ DY
Sbjct: 97 YGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKRDY 156
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + A+G+ D S DG + KRPRT +T +Q K ++ SPKP R V
Sbjct: 157 E------EAKAKGLYLD-----GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHV 205
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 206 REQLSQDTGLDMRVVQ 221
>gi|195050066|ref|XP_001992820.1| GH13485 [Drosophila grimshawi]
gi|193899879|gb|EDV98745.1| GH13485 [Drosophila grimshawi]
Length = 451
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 80/136 (58%), Gaps = 12/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC C + P ++V + DNV+H+QCF+C +C L G++F +++ +L C+ DY
Sbjct: 97 YGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKRDY 156
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + A+G+ D S DG + KRPRT +T +Q K ++ SPKP R V
Sbjct: 157 E------EAKAKGLYLD-----GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHV 205
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 206 REQLSQDTGLDMRVVQ 221
>gi|4106560|gb|AAD02889.1| LIM homeodomain transcription factor [Drosophila melanogaster]
Length = 440
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 80/136 (58%), Gaps = 12/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC C + P ++V + DNV+H+QCF+C +C L G++F +++ +L C+ DY
Sbjct: 97 YGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKRDY 156
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + A+G+ D S DG + KRPRT +T +Q K ++ SPKP R V
Sbjct: 157 E------EAKAKGLYLD-----GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHV 205
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 206 REQLSQDTGLDMRVVQ 221
>gi|17136270|ref|NP_476606.1| Lim3, isoform A [Drosophila melanogaster]
gi|7298537|gb|AAF53756.1| Lim3, isoform A [Drosophila melanogaster]
Length = 440
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 80/136 (58%), Gaps = 12/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC C + P ++V + DNV+H+QCF+C +C L G++F +++ +L C+ DY
Sbjct: 97 YGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKRDY 156
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + A+G+ D S DG + KRPRT +T +Q K ++ SPKP R V
Sbjct: 157 E------EAKAKGLYLD-----GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHV 205
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 206 REQLSQDTGLDMRVVQ 221
>gi|195580083|ref|XP_002079885.1| GD21780 [Drosophila simulans]
gi|194191894|gb|EDX05470.1| GD21780 [Drosophila simulans]
Length = 438
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 80/136 (58%), Gaps = 12/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC C + P ++V + DNV+H+QCF+C +C L G++F +++ +L C+ DY
Sbjct: 97 YGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKRDY 156
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + A+G+ D S DG + KRPRT +T +Q K ++ SPKP R V
Sbjct: 157 E------EAKAKGLYLD-----GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHV 205
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 206 REQLSQDTGLDMRVVQ 221
>gi|198473411|ref|XP_001356286.2| GA10505 [Drosophila pseudoobscura pseudoobscura]
gi|198139444|gb|EAL33349.2| GA10505 [Drosophila pseudoobscura pseudoobscura]
Length = 491
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 52/136 (38%), Positives = 80/136 (58%), Gaps = 12/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC C + P ++V + D+V+H+QCF+C +C L G++F +++ +L C+ DY
Sbjct: 154 YGTKCSACDMGIPPTQVVRRAQDHVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKRDY 213
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + A+G+ D S DG + KRPRT +T +Q K ++ SPKP R V
Sbjct: 214 E------EAKAKGLYLD-----GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHV 262
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 263 REQLSQDTGLDMRVVQ 278
>gi|195164566|ref|XP_002023117.1| GL21131 [Drosophila persimilis]
gi|194105202|gb|EDW27245.1| GL21131 [Drosophila persimilis]
Length = 490
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 52/136 (38%), Positives = 80/136 (58%), Gaps = 12/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC C + P ++V + D+V+H+QCF+C +C L G++F +++ +L C+ DY
Sbjct: 153 YGTKCSACDMGIPPTQVVRRAQDHVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKRDY 212
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + A+G+ D S DG + KRPRT +T +Q K ++ SPKP R V
Sbjct: 213 E------EAKAKGLYLD-----GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHV 261
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 262 REQLSQDTGLDMRVVQ 277
>gi|386769869|ref|NP_001246087.1| Lim3, isoform E [Drosophila melanogaster]
gi|383291572|gb|AFH03761.1| Lim3, isoform E [Drosophila melanogaster]
Length = 405
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 79/136 (58%), Gaps = 12/136 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQG-QLFCRPDY 61
Y KC C + P ++V + DNV+H+QCF+C +C L G++F + + +L C+ DY
Sbjct: 62 YGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKRDY 121
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + A+G+ D S DG + KRPRT +T +Q K ++ SPKP R V
Sbjct: 122 E------EAKAKGLYLD-----GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHV 170
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 171 REQLSQDTGLDMRVVQ 186
>gi|270007707|gb|EFA04155.1| hypothetical protein TcasGA2_TC014400 [Tribolium castaneum]
Length = 415
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 15/136 (11%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQG-QLFCRPDY 61
+ KC GC + P ++V + DNV+H+QCF CV+C +L G++F + + +L C+PDY
Sbjct: 123 FGTKCAGCDLGIPPTQVVRRAQDNVYHLQCFSCVMCARQLNTGDEFYLMEDRKLVCKPDY 182
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E +++ DG + KRPRT +T +Q K ++ SPKP R V
Sbjct: 183 EAAKS--------------KAAECLDGDQPNKRPRTTITAKQLETLKNAYNNSPKPARHV 228
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 229 REQLSQDTGLDMRVVQ 244
>gi|189237525|ref|XP_973330.2| PREDICTED: similar to lim homeobox protein [Tribolium castaneum]
Length = 448
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQG-QLFCRPDYEKE 64
KC GC + P ++V + DNV+H+QCF CV+C +L G++F + + +L C+PDYE
Sbjct: 159 KCAGCDLGIPPTQVVRRAQDNVYHLQCFSCVMCARQLNTGDEFYLMEDRKLVCKPDYEAA 218
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
+++ DG + KRPRT +T +Q K ++ SPKP R VRE
Sbjct: 219 KS--------------KAAECLDGDQPNKRPRTTITAKQLETLKNAYNNSPKPARHVREQ 264
Query: 125 LARDTGLSVRIVQ 137
L++DTGL +R+VQ
Sbjct: 265 LSQDTGLDMRVVQ 277
>gi|345493999|ref|XP_001603795.2| PREDICTED: LIM/homeobox protein Lhx3-like [Nasonia vitripennis]
Length = 450
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 17/139 (12%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF--VIKQGQLFCRPD 60
Y KC GC + L P ++V + D +H+ CF C +C +L G++F +++ +L C+PD
Sbjct: 111 YGTKCAGCGQGLAPSQVVRRAQDFTYHLTCFSCAMCSRQLDTGDEFYLMVEDAKLVCKPD 170
Query: 61 YE--KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
YE K E+ G S DG + KRPRT +T +Q K ++ SPKP
Sbjct: 171 YEQAKAKELADG-------------GSIDGDQPNKRPRTTITAKQLETLKLAYNNSPKPA 217
Query: 119 RKVREGLARDTGLSVRIVQ 137
R VRE L++DTGL +R+VQ
Sbjct: 218 RHVREQLSQDTGLDMRVVQ 236
>gi|328708425|ref|XP_001944208.2| PREDICTED: LIM/homeobox protein Lhx3-like [Acyrthosiphon pisum]
Length = 375
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 15/136 (11%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQG-QLFCRPDY 61
Y KC GC + P ++V + D V+H+QCF CV+CG L G++F + + +L C+PDY
Sbjct: 100 YGTKCAGCDLGIPPTQIVRRAQDLVYHLQCFACVMCGRTLNTGDEFYLMEDRKLVCKPDY 159
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E G DG + KRPRT +T +Q K ++ SPKP R V
Sbjct: 160 EAAKTKEGGCL--------------DGDQPNKRPRTTITAKQLETLKMAYNNSPKPARHV 205
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 206 REQLSQDTGLDMRVVQ 221
>gi|242011200|ref|XP_002426343.1| LIM/homeobox protein Lhx4, putative [Pediculus humanus corporis]
gi|212510420|gb|EEB13605.1| LIM/homeobox protein Lhx4, putative [Pediculus humanus corporis]
Length = 366
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 79/136 (58%), Gaps = 15/136 (11%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC GC + + P ++V + +NV+H+QCF C +C +L G++F +++ +L C+PDY
Sbjct: 79 FGTKCAGCEQGIPPTQVVRRAQENVYHLQCFACAMCARQLNTGDEFYLMEDKKLVCKPDY 138
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E G+ D G + KRPRT +T +Q K+++ SPKP R V
Sbjct: 139 EAAKT-----KDGVCLD---------GDQPNKRPRTTITAKQLETLKSAYNNSPKPARHV 184
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 185 REQLSQDTGLDMRVVQ 200
>gi|307200797|gb|EFN80850.1| LIM/homeobox protein Lhx3 [Harpegnathos saltator]
Length = 421
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 79/138 (57%), Gaps = 16/138 (11%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQG-QLFCRPDY 61
+ KC GCS+ L P ++V + + V+H+ CF C +C +L G++F + + +L C+PDY
Sbjct: 143 FGTKCAGCSQGLSPSQVVRRAQELVYHLTCFSCALCSRQLDTGDEFYLMEDRKLVCKPDY 202
Query: 62 E--KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
E K E+ G S DG + KRPRT +T +Q K ++ SPKP R
Sbjct: 203 EQAKAKELADG-------------GSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPAR 249
Query: 120 KVREGLARDTGLSVRIVQ 137
VRE L++DTGL +R+VQ
Sbjct: 250 HVREQLSQDTGLDMRVVQ 267
>gi|15706308|dbj|BAB68342.1| Cs-LHX3 [Ciona savignyi]
Length = 472
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 74/136 (54%), Gaps = 18/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC GC E + P E+V + +NV+H++CF C +C +L G+QF ++ +L C+ DY
Sbjct: 133 YGTKCAGCDEAIPPTEVVRRAQENVYHLECFRCFMCNDQLGTGDQFYLLDDNRLVCKKDY 192
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E S+ D G KRPRT +T +Q K ++ SPKP R V
Sbjct: 193 E-----------------TAKSRDIDMDNGIKRPRTTITAKQLETLKLAYNQSPKPARHV 235
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ DTGL +R+VQ
Sbjct: 236 REQLSSDTGLDMRVVQ 251
>gi|237512911|dbj|BAA07578.2| LIM homeodomain protein Hr-Lhx3 a-form [Halocynthia roretzi]
Length = 690
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 18/133 (13%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + P E++ + DNV+H++CF C +C ++ G+QF +++ +L C+ DYE+
Sbjct: 340 KCTACGHGIPPTEVIRRAQDNVYHLECFCCFLCHEKMGTGDQFYLLEDNRLVCKKDYEQ- 398
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
S+ D G KRPRT +T +Q K+++ SPKP R VRE
Sbjct: 399 ----------------AKSRDADIENGVKRPRTTITAKQLETLKSAYNQSPKPARHVREQ 442
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 443 LSSETGLDMRVVQ 455
>gi|405977546|gb|EKC41989.1| LIM/homeobox protein Lhx3 [Crassostrea gigas]
Length = 432
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 52/136 (38%), Positives = 79/136 (58%), Gaps = 15/136 (11%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC GC + + P E+V + DNV+H++CF C++C +L G++F +++ +L C+ DY
Sbjct: 137 YGTKCAGCEKGIPPTEVVRRAQDNVYHLECFACLMCSRQLNTGDEFYLMEDRKLVCKADY 196
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E A+GI +D KRPRT +T +Q A K ++ SPKP R V
Sbjct: 197 E------SAKARGI--------NEYDIDAANKRPRTTITAKQLEALKRAYNESPKPARHV 242
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 243 REQLSAETGLDMRVVQ 258
>gi|395824959|ref|XP_003785717.1| PREDICTED: LIM/homeobox protein Lhx4 [Otolemur garnettii]
Length = 390
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF CV+C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACVICNRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|171916111|ref|NP_001116445.1| LIM/homeobox protein Lhx4 [Danio rerio]
Length = 391
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 78/136 (57%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF CV+C +L G++F +++ G+L C+ DY
Sbjct: 88 FGTKCASCQQGIPPTQVVRKAQDFVYHLHCFACVMCSRQLATGDEFYLMEDGRLVCKEDY 147
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K++++ SPKP R V
Sbjct: 148 E------------------TAKQNDDSETGAKRPRTTITAKQLETLKSAYKNSPKPARHV 189
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 190 REQLSSETGLDMRVVQ 205
>gi|383858395|ref|XP_003704687.1| PREDICTED: LIM/homeobox protein Lhx3-like [Megachile rotundata]
Length = 463
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 16/138 (11%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQG-QLFCRPDY 61
+ KC GC + L P ++V + + V+H+ CF C +C +L G++F + + +L C+PDY
Sbjct: 146 FGTKCAGCGQGLAPSQVVRRAQELVYHLTCFSCALCSRQLDTGDEFYLMEDRKLVCKPDY 205
Query: 62 E--KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
E K E+ G S DG + KRPRT +T +Q K ++ SPKP R
Sbjct: 206 EQAKAKELADG-------------GSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPAR 252
Query: 120 KVREGLARDTGLSVRIVQ 137
VRE L++DTGL +R+VQ
Sbjct: 253 HVREQLSQDTGLDMRVVQ 270
>gi|194210370|ref|XP_001914860.1| PREDICTED: LIM/homeobox protein Lhx4-like [Equus caballus]
Length = 390
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|73960401|ref|XP_547420.2| PREDICTED: LIM/homeobox protein Lhx4 isoform 1 [Canis lupus
familiaris]
Length = 390
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|15375314|ref|NP_203129.1| LIM/homeobox protein Lhx4 [Homo sapiens]
gi|209572644|sp|Q969G2.2|LHX4_HUMAN RecName: Full=LIM/homeobox protein Lhx4; Short=LIM homeobox protein
4
gi|14599448|gb|AAK70923.1|AF179849_1 LIM homeobox protein 4 [Homo sapiens]
gi|22094433|gb|AAM91896.1|AF405430_1 LIM homeobox protein 4 [Homo sapiens]
gi|15079940|gb|AAH11759.1| LIM homeobox 4 [Homo sapiens]
gi|123988108|gb|ABM83830.1| LIM homeobox 4 [synthetic construct]
gi|123999145|gb|ABM87154.1| LIM homeobox 4 [synthetic construct]
gi|261861646|dbj|BAI47345.1| LIM homeobox 4 [synthetic construct]
Length = 390
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|351699208|gb|EHB02127.1| LIM/homeobox protein Lhx4 [Heterocephalus glaber]
Length = 390
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|348578364|ref|XP_003474953.1| PREDICTED: LIM/homeobox protein Lhx4 [Cavia porcellus]
Length = 390
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|410986072|ref|XP_003999336.1| PREDICTED: LIM/homeobox protein Lhx4 [Felis catus]
Length = 390
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|426332930|ref|XP_004028045.1| PREDICTED: LIM/homeobox protein Lhx4 [Gorilla gorilla gorilla]
Length = 390
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|426239972|ref|XP_004013890.1| PREDICTED: LIM/homeobox protein Lhx4 [Ovis aries]
Length = 390
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|402857943|ref|XP_003893495.1| PREDICTED: LIM/homeobox protein Lhx4 [Papio anubis]
gi|355558975|gb|EHH15755.1| hypothetical protein EGK_01889 [Macaca mulatta]
Length = 390
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|109019176|ref|XP_001115086.1| PREDICTED: LIM/homeobox protein Lhx4-like isoform 2 [Macaca
mulatta]
Length = 390
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|307174398|gb|EFN64917.1| LIM/homeobox protein Lhx3 [Camponotus floridanus]
Length = 467
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 77/135 (57%), Gaps = 16/135 (11%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQG-QLFCRPDYE-- 62
KC GC + L P ++V + + V+H+ CF C +C +L G++F + + +L C+PDYE
Sbjct: 145 KCAGCGQGLAPSQVVRRAQELVYHLTCFSCALCSRQLDTGDEFYLMEDRKLVCKPDYEQA 204
Query: 63 KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
K E+ G S DG + KRPRT +T +Q K ++ SPKP R VR
Sbjct: 205 KAKELADG-------------GSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVR 251
Query: 123 EGLARDTGLSVRIVQ 137
E L++DTGL +R+VQ
Sbjct: 252 EQLSQDTGLDMRVVQ 266
>gi|148707455|gb|EDL39402.1| LIM homeobox protein 4, isoform CRA_a [Mus musculus]
Length = 329
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 24 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 83
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 84 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 125
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 126 REQLSSETGLDMRVVQ 141
>gi|119611484|gb|EAW91078.1| LIM homeobox 4 [Homo sapiens]
Length = 390
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|18026224|gb|AAL07260.1| LIM homeodomain protein [Homo sapiens]
Length = 390
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|300795912|ref|NP_001179714.1| LIM/homeobox protein Lhx4 [Bos taurus]
gi|296479119|tpg|DAA21234.1| TPA: LIM homeobox 4 [Bos taurus]
gi|440901216|gb|ELR52198.1| LIM/homeobox protein Lhx4 [Bos grunniens mutus]
Length = 390
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|190684642|ref|NP_034842.2| LIM/homeobox protein Lhx4 [Mus musculus]
gi|209572773|sp|P53776.4|LHX4_MOUSE RecName: Full=LIM/homeobox protein Lhx4; Short=LIM homeobox protein
4
gi|148707456|gb|EDL39403.1| LIM homeobox protein 4, isoform CRA_b [Mus musculus]
Length = 390
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|332018435|gb|EGI59029.1| LIM/homeobox protein Lhx3 [Acromyrmex echinatior]
Length = 467
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 77/135 (57%), Gaps = 16/135 (11%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQG-QLFCRPDYE-- 62
KC GC + L P ++V + + V+H+ CF C +C +L G++F + + +L C+PDYE
Sbjct: 145 KCAGCGQGLAPSQVVRRAQEFVYHLTCFSCALCSRQLDTGDEFYLMEDRKLVCKPDYEQA 204
Query: 63 KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
K E+ G S DG + KRPRT +T +Q K ++ SPKP R VR
Sbjct: 205 KAKELADG-------------GSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVR 251
Query: 123 EGLARDTGLSVRIVQ 137
E L++DTGL +R+VQ
Sbjct: 252 EQLSQDTGLDMRVVQ 266
>gi|29437129|gb|AAH49834.1| Lhx4 protein [Mus musculus]
Length = 390
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|432115998|gb|ELK37137.1| LIM/homeobox protein Lhx4 [Myotis davidii]
Length = 389
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 84 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 143
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 144 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 185
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 186 REQLSSETGLDMRVVQ 201
>gi|431915961|gb|ELK16215.1| LIM/homeobox protein Lhx4 [Pteropus alecto]
Length = 329
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 76/133 (57%), Gaps = 19/133 (14%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DYE
Sbjct: 27 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFYLMEDGRLVCKEDYE-- 84
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
T+ ++ D G KRPRT +T +Q K +++ SPKP R VRE
Sbjct: 85 ----------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQ 128
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 129 LSSETGLDMRVVQ 141
>gi|344278250|ref|XP_003410909.1| PREDICTED: LIM/homeobox protein Lhx4-like [Loxodonta africana]
Length = 390
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 76/133 (57%), Gaps = 19/133 (14%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DYE
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYE-- 145
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
T+ ++ D G KRPRT +T +Q K +++ SPKP R VRE
Sbjct: 146 ----------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQ 189
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 190 LSSETGLDMRVVQ 202
>gi|354475897|ref|XP_003500163.1| PREDICTED: LIM/homeobox protein Lhx4 [Cricetulus griseus]
Length = 390
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|341877265|gb|EGT33200.1| CBN-CEH-14 protein [Caenorhabditis brenneri]
Length = 358
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 74/134 (55%), Gaps = 12/134 (8%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF--VIKQGQLFCRPDYEK 63
KC CSE + PD +V K +++HV+CF C +C L+ GE+F + +L C+ DYE+
Sbjct: 107 KCAACSEGIIPDHVVRKASGHIYHVECFTCFICKRVLETGEEFYLIADDARLVCKDDYEQ 166
Query: 64 EVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVRE 123
+ L + + +G G KRPRT ++ + K +++ S KP R VRE
Sbjct: 167 ARDKLS----------LPETADSEGDGGNKRPRTTISAKSLETLKQAYQTSSKPARHVRE 216
Query: 124 GLARDTGLSVRIVQ 137
LA DTGL +R+VQ
Sbjct: 217 QLAADTGLDMRVVQ 230
>gi|297662584|ref|XP_002809779.1| PREDICTED: LIM/homeobox protein Lhx4 [Pongo abelii]
Length = 390
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|157820803|ref|NP_001101818.1| LIM/homeobox protein Lhx4 [Rattus norvegicus]
gi|149058350|gb|EDM09507.1| LIM homeobox protein 4 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 329
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 24 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 83
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 84 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 125
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 126 REQLSSETGLDMRVVQ 141
>gi|345325463|ref|XP_003430923.1| PREDICTED: hypothetical protein LOC100085508 [Ornithorhynchus
anatinus]
Length = 884
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 78/137 (56%), Gaps = 19/137 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 635 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 694
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 695 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 736
Query: 122 REGLARDTGLSVRIVQS 138
RE L+ +TGL +R+VQ+
Sbjct: 737 REQLSSETGLDMRVVQT 753
>gi|350418514|ref|XP_003491882.1| PREDICTED: LIM/homeobox protein Lhx3-like [Bombus impatiens]
Length = 463
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 78/138 (56%), Gaps = 16/138 (11%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQG-QLFCRPDY 61
+ KC GC + L P ++V + + ++H+ CF C +C +L G++F + + +L C+PDY
Sbjct: 146 FGTKCAGCGQGLAPSQVVRRAQELIYHLTCFSCALCSRQLDTGDEFYLMEDRKLVCKPDY 205
Query: 62 E--KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
E K E+ G S DG + KRPRT +T +Q K ++ SPKP R
Sbjct: 206 EQAKAKELADG-------------GSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPAR 252
Query: 120 KVREGLARDTGLSVRIVQ 137
VRE L++DTGL +R+VQ
Sbjct: 253 HVREQLSQDTGLDMRVVQ 270
>gi|340722532|ref|XP_003399658.1| PREDICTED: LIM/homeobox protein Lhx3-like [Bombus terrestris]
Length = 486
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 78/138 (56%), Gaps = 16/138 (11%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQG-QLFCRPDY 61
+ KC GC + L P ++V + + ++H+ CF C +C +L G++F + + +L C+PDY
Sbjct: 169 FGTKCAGCGQGLAPSQVVRRAQELIYHLTCFSCALCSRQLDTGDEFYLMEDRKLVCKPDY 228
Query: 62 E--KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
E K E+ G S DG + KRPRT +T +Q K ++ SPKP R
Sbjct: 229 EQAKAKELADG-------------GSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPAR 275
Query: 120 KVREGLARDTGLSVRIVQ 137
VRE L++DTGL +R+VQ
Sbjct: 276 HVREQLSQDTGLDMRVVQ 293
>gi|322793254|gb|EFZ16911.1| hypothetical protein SINV_14186 [Solenopsis invicta]
Length = 392
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 77/135 (57%), Gaps = 16/135 (11%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQG-QLFCRPDYE-- 62
KC GC + L P ++V + + V+H+ CF C +C +L G++F + + +L C+PDYE
Sbjct: 64 KCAGCGQGLAPSQVVRRAQEFVYHLTCFSCALCSRQLDTGDEFYLMEDRKLVCKPDYEQA 123
Query: 63 KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
K E+ G S DG + KRPRT +T +Q K ++ SPKP R VR
Sbjct: 124 KAKELADG-------------GSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVR 170
Query: 123 EGLARDTGLSVRIVQ 137
E L++DTGL +R+VQ
Sbjct: 171 EQLSQDTGLDMRVVQ 185
>gi|301770851|ref|XP_002920842.1| PREDICTED: LIM/homeobox protein Lhx4-like [Ailuropoda melanoleuca]
Length = 390
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF CV+C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFSCVICNRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|4809173|gb|AAD30125.1|AF135415_1 LIM-homeobox protein [Mus musculus]
Length = 367
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 76/133 (57%), Gaps = 19/133 (14%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DYE
Sbjct: 65 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYE-- 122
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
T+ ++ D G KRPRT +T +Q K +++ SPKP R VRE
Sbjct: 123 ----------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQ 166
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 167 LSSETGLDMRVVQ 179
>gi|397508667|ref|XP_003824769.1| PREDICTED: LIM/homeobox protein Lhx4 [Pan paniscus]
gi|410034179|ref|XP_524984.3| PREDICTED: LIM/homeobox protein Lhx4 [Pan troglodytes]
Length = 466
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 161 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 220
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 221 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 262
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 263 REQLSSETGLDMRVVQ 278
>gi|149058349|gb|EDM09506.1| LIM homeobox protein 4 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 376
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 71 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 130
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 131 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 172
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 173 REQLSSETGLDMRVVQ 188
>gi|291397314|ref|XP_002715058.1| PREDICTED: LIM homeobox protein 4 [Oryctolagus cuniculus]
Length = 390
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|380012090|ref|XP_003690122.1| PREDICTED: LIM/homeobox protein Lhx3-like [Apis florea]
Length = 465
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 78/138 (56%), Gaps = 16/138 (11%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQG-QLFCRPDY 61
+ KC GC + L P ++V + + ++H+ CF C +C +L G++F + + +L C+PDY
Sbjct: 148 FGTKCAGCGQGLAPSQVVRRAQELIYHLTCFSCALCSRQLDTGDEFYLMEDRKLVCKPDY 207
Query: 62 E--KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
E K E+ G S DG + KRPRT +T +Q K ++ SPKP R
Sbjct: 208 EQAKAKELADG-------------GSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPAR 254
Query: 120 KVREGLARDTGLSVRIVQ 137
VRE L++DTGL +R+VQ
Sbjct: 255 HVREQLSQDTGLDMRVVQ 272
>gi|120537751|gb|AAI29375.1| Lhx4 protein [Danio rerio]
Length = 244
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 77/133 (57%), Gaps = 19/133 (14%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V K D V+H+ CF CV+C +L G++F +++ G+L C+ DYE
Sbjct: 89 KCASCQQGIPPTQVVRKAQDFVYHLHCFACVMCSRQLATGDEFYLMEDGRLVCKEDYE-- 146
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
T+ ++ D G KRPRT +T +Q K++++ SPKP R VRE
Sbjct: 147 ----------------TAKQNDDSETGAKRPRTTITAKQLETLKSAYKNSPKPARHVREQ 190
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 191 LSSETGLDMRVVQ 203
>gi|14579221|gb|AAK69169.1|AF282899_1 LIM homeobox protein [Homo sapiens]
gi|15146348|dbj|BAB62817.1| LIM homeobox 4 [Homo sapiens]
Length = 367
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 62 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 121
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 122 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 163
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 164 REQLSSETGLDMRVVQ 179
>gi|355746127|gb|EHH50752.1| hypothetical protein EGM_01626, partial [Macaca fascicularis]
Length = 364
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 59 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 118
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 119 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 160
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 161 REQLSSETGLDMRVVQ 176
>gi|334321803|ref|XP_001374523.2| PREDICTED: LIM/homeobox protein Lhx4-like [Monodelphis domestica]
Length = 391
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 86 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 145
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 146 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 187
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 188 REQLSSETGLDMRVVQ 203
>gi|328782955|ref|XP_394135.3| PREDICTED: LIM/homeobox protein Lhx3 [Apis mellifera]
Length = 442
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 78/138 (56%), Gaps = 16/138 (11%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQG-QLFCRPDY 61
+ KC GC + L P ++V + + ++H+ CF C +C +L G++F + + +L C+PDY
Sbjct: 146 FGTKCAGCGQGLAPSQVVRRAQELIYHLTCFSCALCSRQLDTGDEFYLMEDRKLVCKPDY 205
Query: 62 E--KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
E K E+ G S DG + KRPRT +T +Q K ++ SPKP R
Sbjct: 206 EQAKAKELADG-------------GSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPAR 252
Query: 120 KVREGLARDTGLSVRIVQ 137
VRE L++DTGL +R+VQ
Sbjct: 253 HVREQLSQDTGLDMRVVQ 270
>gi|156393340|ref|XP_001636286.1| predicted protein [Nematostella vectensis]
gi|156223388|gb|EDO44223.1| predicted protein [Nematostella vectensis]
Length = 184
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 84/175 (48%), Gaps = 47/175 (26%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC+E + D +MK +D +H C C +C S+L R K +L+CR DYEK
Sbjct: 1 CTGCNEPI-EDRFLMKVVDEAWHESCLQCCICRSQLSRS--CFSKDRKLYCRTDYEKTFG 57
Query: 66 -------------------------------------------EMLQGYAQGIPFDLITS 82
E ++ A D
Sbjct: 58 HRTTIWHLSFAVCTDNVFEKSLCLSLPCCDVSNNTMPTERDIKEEIKTEANSDSDDSSVH 117
Query: 83 SKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
D ++GPKRPRTILT+QQR+ FK++FEIS KPCRKVRE L+R+TGLSVR+VQ
Sbjct: 118 GDDDDDKKGPKRPRTILTSQQRKVFKSAFEISSKPCRKVREELSRETGLSVRVVQ 172
>gi|281354363|gb|EFB29947.1| hypothetical protein PANDA_009642 [Ailuropoda melanoleuca]
Length = 365
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF CV+C +L G++F +++ G+L C+ DY
Sbjct: 60 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFSCVICNRQLATGDEFYLMEDGRLVCKEDY 119
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 120 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 161
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 162 REQLSSETGLDMRVVQ 177
>gi|2149584|gb|AAC53336.1| LIM-homeobox protein [Mus musculus]
Length = 190
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 76/133 (57%), Gaps = 19/133 (14%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DYE
Sbjct: 59 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYE-- 116
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
T+ ++ D G KRPRT +T +Q K +++ SPKP R VRE
Sbjct: 117 ----------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQ 160
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 161 LSSETGLDMRVVQ 173
>gi|363736513|ref|XP_001235592.2| PREDICTED: LIM/homeobox protein Lhx4 [Gallus gallus]
Length = 374
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 71 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFYLMEDGRLVCKEDY 130
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 131 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 172
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 173 REQLSSETGLDMRVVQ 188
>gi|327270281|ref|XP_003219918.1| PREDICTED: LIM/homeobox protein Lhx4-like [Anolis carolinensis]
Length = 449
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 144 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 203
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 204 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 245
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 246 REQLSSETGLDMRVVQ 261
>gi|296229653|ref|XP_002760359.1| PREDICTED: LIM/homeobox protein Lhx4 [Callithrix jacchus]
Length = 390
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICTRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|403266388|ref|XP_003925368.1| PREDICTED: LIM/homeobox protein Lhx4 [Saimiri boliviensis
boliviensis]
Length = 390
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICTRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|326924792|ref|XP_003208609.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx4-like
[Meleagris gallopavo]
Length = 384
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 82 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFYLMEDGRLVCKEDY 141
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 142 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 183
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 184 REQLSSETGLDMRVVQ 199
>gi|391327822|ref|XP_003738394.1| PREDICTED: LIM/homeobox protein Lhx3-like [Metaseiulus
occidentalis]
Length = 408
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 79/136 (58%), Gaps = 22/136 (16%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC GC + + P ++V + +NV+H+ CF C++C +L G++F +++ +L C+ DY
Sbjct: 109 YGTKCAGCEQGIPPTQVVRRAQENVYHLACFSCILCKRQLNTGDEFYLMEDNKLVCKADY 168
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K+ +G KRPRT +T +Q K+++ SPKP R V
Sbjct: 169 E-------------------AAKAREGST--KRPRTTITAKQLETLKSAYNQSPKPARHV 207
Query: 122 REGLARDTGLSVRIVQ 137
RE L+RDTGL +R+VQ
Sbjct: 208 REQLSRDTGLDMRVVQ 223
>gi|449509307|ref|XP_002191188.2| PREDICTED: LIM/homeobox protein Lhx4-like, partial [Taeniopygia
guttata]
Length = 412
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 76/133 (57%), Gaps = 19/133 (14%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DYE
Sbjct: 105 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFYLMEDGRLVCKEDYE-- 162
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
T+ ++ D G KRPRT +T +Q K +++ SPKP R VRE
Sbjct: 163 ----------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQ 206
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 207 LSSETGLDMRVVQ 219
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 76/133 (57%), Gaps = 19/133 (14%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DYE
Sbjct: 284 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFYLMEDGRLVCKEDYE-- 341
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
T+ ++ D G KRPRT +T +Q K +++ SPKP R VRE
Sbjct: 342 ----------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQ 385
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 386 LSSETGLDMRVVQ 398
>gi|195164562|ref|XP_002023115.1| GL21181 [Drosophila persimilis]
gi|194105200|gb|EDW27243.1| GL21181 [Drosophila persimilis]
Length = 436
Score = 98.2 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 50/136 (36%), Positives = 78/136 (57%), Gaps = 16/136 (11%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC C + P ++V + D+V+H+QCF+C +C L G++F +++ +L C+ DY
Sbjct: 103 YGTKCSACDMGIPPTQVVRRAQDHVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKRDY 162
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + A+G+ D G + KRPRT +T +Q K ++ SPKP R V
Sbjct: 163 E------EAKAKGLYLD---------GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHV 207
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 208 REQLSQDTGLDMRVVQ 223
>gi|335295820|ref|XP_003357609.1| PREDICTED: LIM/homeobox protein Lhx4-like [Sus scrofa]
Length = 390
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLPCFACIICNRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|241999336|ref|XP_002434311.1| lhx3, putative [Ixodes scapularis]
gi|215496070|gb|EEC05711.1| lhx3, putative [Ixodes scapularis]
Length = 252
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 78/136 (57%), Gaps = 22/136 (16%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC GC + P ++V + DNV+H+ CF C++C +L G++F +++ +L C+ DY
Sbjct: 24 YGTKCAGCELGIPPTQVVRRAQDNVYHLHCFACILCKRQLNTGDEFYLMEDNKLVCKADY 83
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K+ +G KRPRT +T +Q K+++ SPKP R V
Sbjct: 84 E-------------------AAKAREGST--KRPRTTITAKQLETLKSAYNNSPKPARHV 122
Query: 122 REGLARDTGLSVRIVQ 137
RE L++DTGL +R+VQ
Sbjct: 123 REQLSQDTGLDMRVVQ 138
>gi|432856246|ref|XP_004068425.1| PREDICTED: LIM/homeobox protein Lhx4-like [Oryzias latipes]
Length = 389
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 78/136 (57%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 86 FGTKCASCQQGIPPTQVVRKAQDFVYHLHCFACIMCSRQLATGDEFYLMEDGRLVCKVDY 145
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K++++ SPKP R V
Sbjct: 146 E------------------TAKQNDDSEAGTKRPRTTITAKQLETLKSAYKNSPKPARHV 187
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 188 REQLSSETGLDMRVVQ 203
>gi|449266486|gb|EMC77539.1| LIM/homeobox protein Lhx4, partial [Columba livia]
Length = 236
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 76/133 (57%), Gaps = 19/133 (14%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DYE
Sbjct: 63 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFYLMEDGRLVCKEDYE-- 120
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
T+ ++ D G KRPRT +T +Q K +++ SPKP R VRE
Sbjct: 121 ----------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQ 164
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 165 LSSETGLDMRVVQ 177
>gi|158292633|ref|XP_558527.3| AGAP005137-PA [Anopheles gambiae str. PEST]
gi|157017083|gb|EAL40471.3| AGAP005137-PA [Anopheles gambiae str. PEST]
Length = 432
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/54 (79%), Positives = 50/54 (92%)
Query: 84 KSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
++ DGRRGPKRPRTILT+ QRR FKASF++SPKPCRKVRE LA+DTGLSVR+VQ
Sbjct: 216 RTRDGRRGPKRPRTILTSAQRRQFKASFDVSPKPCRKVREALAKDTGLSVRVVQ 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
+ C GC E++ P E+VM+ V+H+ CF+C C LQ+GE F I+ G+L C+ D EK+
Sbjct: 102 RDCYGCGERIAPIEMVMRAKHLVYHLHCFLCYTCNRPLQKGEPFSIRAGKLICQHDLEKD 161
Score = 38.9 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC +K+ + + D +H QC +C +C R+Q + K +++C+ DY +
Sbjct: 19 CEGCGQKIKDRYFMKLSPDQFWHEQCLLCCIC--RIQLSQTCYTKNTKVYCKDDYYR 73
>gi|390335971|ref|XP_780701.3| PREDICTED: LIM/homeobox protein Lhx3-like [Strongylocentrotus
purpuratus]
Length = 545
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 77/136 (56%), Gaps = 18/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC C + + P E+V + LDNV+H+ CF C++C +L G++ F++ +L C+ DY
Sbjct: 202 FGTKCSSCEKGIAPTEIVRRALDNVYHLHCFCCIICTRQLSTGDEFFLMTDNKLVCKQDY 261
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E A+ ++ S+ KRPRT +T +Q K ++ SPKP R V
Sbjct: 262 EA--------AKARELEMDNSN---------KRPRTTITAKQLETLKTAYSNSPKPARHV 304
Query: 122 REGLARDTGLSVRIVQ 137
RE LA++TGL +R+VQ
Sbjct: 305 REQLAQETGLDMRVVQ 320
>gi|301615074|ref|XP_002937009.1| PREDICTED: LIM/homeobox protein Lhx4-like [Xenopus (Silurana)
tropicalis]
Length = 385
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 76/133 (57%), Gaps = 19/133 (14%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DYE
Sbjct: 97 KCTACQQGIPPTQVVRKAQDFVYHLHCFSCIICSRQLATGDEFYLMEDGRLVCKEDYE-- 154
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
T+ ++ D G KRPRT +T +Q K +++ SPKP R VRE
Sbjct: 155 ----------------TAKQNDDSEGGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQ 198
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 199 LSSETGLDMRVVQ 211
>gi|229619792|dbj|BAH58094.1| LIM homeobox protein 3 [Hemicentrotus pulcherrimus]
Length = 485
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 77/136 (56%), Gaps = 18/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC C + + P E+V + LDNV+H+ CF C++C +L G++ F++ +L C+ DY
Sbjct: 142 FGTKCSSCEKGIAPTEIVRRALDNVYHLHCFCCIICTRQLSTGDEFFLMTDNKLVCKQDY 201
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E A+ ++ S+ KRPRT +T +Q K ++ SPKP R V
Sbjct: 202 EA--------AKARELEMDNSN---------KRPRTTITAKQLETLKTAYSNSPKPARHV 244
Query: 122 REGLARDTGLSVRIVQ 137
RE LA++TGL +R+VQ
Sbjct: 245 REQLAQETGLDMRVVQ 260
>gi|49659006|emb|CAD37944.1| homeobox protein LHX [Suberites domuncula]
Length = 342
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 80/136 (58%), Gaps = 22/136 (16%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ +C GC++ + P ++V + +NV+H+QCF C +C +L G++F ++ +L C+ DY
Sbjct: 174 FGTRCAGCNQPIPPTQVVRRAQENVYHLQCFACFICSRQLSTGDEFYLMDDKKLVCKADY 233
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++++ DG + KRPRT +T++Q KA++ +S KP R V
Sbjct: 234 E-------------------AARAKDGNQ--KRPRTTITSKQLDTLKAAYTVSSKPSRAV 272
Query: 122 REGLARDTGLSVRIVQ 137
RE LA +TGL VR+VQ
Sbjct: 273 REQLANETGLEVRVVQ 288
>gi|321464128|gb|EFX75138.1| hypothetical protein DAPPUDRAFT_323670 [Daphnia pulex]
Length = 278
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 78/133 (58%), Gaps = 13/133 (9%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQG-QLFCRPDYEKE 64
KC C + + P ++V + +V+H++CF CV+CG +L G++F + + +L C+ DYE
Sbjct: 99 KCACCDQGIAPSQIVRRAQHHVYHLECFQCVLCGRQLDTGDEFYLMEDRKLVCKADYE-- 156
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
+G F + +G PKRPRT +T +Q K+++ SPKP R VRE
Sbjct: 157 ----SAKTKGSHFLEL------EGENPPKRPRTTITAKQLETLKSAYNASPKPARHVREQ 206
Query: 125 LARDTGLSVRIVQ 137
L++DTGL +R+VQ
Sbjct: 207 LSQDTGLDMRVVQ 219
>gi|344254045|gb|EGW10149.1| LIM/homeobox protein Lhx4 [Cricetulus griseus]
Length = 397
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 81/145 (55%), Gaps = 10/145 (6%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 65 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 124
Query: 62 EKEVE---MLQGYAQGIP--FDLITSSKS----HDGRRGPKRPRTILTTQQRRAFKASFE 112
E + + G Q P F S K D G KRPRT +T +Q K +++
Sbjct: 125 ETAKQNGCLGWGRRQRKPSCFSWANSIKVVFTVDDSEAGAKRPRTTITAKQLETLKNAYK 184
Query: 113 ISPKPCRKVREGLARDTGLSVRIVQ 137
SPKP R VRE L+ +TGL +R+VQ
Sbjct: 185 NSPKPARHVREQLSSETGLDMRVVQ 209
>gi|348504454|ref|XP_003439776.1| PREDICTED: LIM/homeobox protein Lhx4-like [Oreochromis niloticus]
Length = 387
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 86 FGTKCASCQQGIPPTQVVRKAQDFVYHLHCFACIMCSRQLATGDEFYLMEDGRLVCKVDY 145
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + ++ D G KRPRT +T +Q K++++ SPKP R V
Sbjct: 146 E------------------AAKQNDDSEAGTKRPRTTITAKQLETLKSAYKNSPKPARHV 187
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 188 REQLSSETGLDMRVVQ 203
>gi|194390004|dbj|BAG60518.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 85/156 (54%), Gaps = 18/156 (11%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 ------EKEVEMLQGYAQGIPFDLIT---------SSKSHDGRRGPKR--PRTILTTQQR 104
KE + +Q D + S+++ D G KR PRT + +Q
Sbjct: 119 LSNSSVAKENSLHSDPSQDDAKDSESANVSDKEAGSNENDDQNLGAKRRGPRTTIKAKQL 178
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQSRP 140
KA+F +PKP R +RE LA++TGL++R++Q RP
Sbjct: 179 ETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVRP 214
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPI-LDRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>gi|443711321|gb|ELU05149.1| hypothetical protein CAPTEDRAFT_228137 [Capitella teleta]
Length = 506
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 77/136 (56%), Gaps = 18/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC GC + + P ++V + DNV+H++CF C +C +L G++F ++ +L C+ DY
Sbjct: 199 FGTKCAGCEQGIPPTQVVRRAQDNVYHLECFACSMCSQQLNTGDEFYLMDDKKLVCKGDY 258
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + FDL ++K RPRT +T +Q A K ++ SPKP R V
Sbjct: 259 ESN--------KAKEFDLDNANK---------RPRTTITAKQLEALKRAYNESPKPARHV 301
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 302 REQLSAETGLDMRVVQ 317
>gi|339236721|ref|XP_003379915.1| LIM/homeobox protein Lhx3 [Trichinella spiralis]
gi|316977365|gb|EFV60475.1| LIM/homeobox protein Lhx3 [Trichinella spiralis]
Length = 262
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 21/134 (15%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVI--KQGQLFCRPDYEK 63
KC GC E + P +V K D+V+H+QCF C VC ++ G++F + G++ C+ D++
Sbjct: 8 KCSGCKEGILPQAVVRKAHDHVYHLQCFKCAVCEREMKTGDEFYLMPSDGKIVCKGDFD- 66
Query: 64 EVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVRE 123
IT +K D KRPRT ++ +Q K ++++SPKP R VRE
Sbjct: 67 ----------------ITKNKDFDNSN--KRPRTTISAKQLETLKHAYQLSPKPARHVRE 108
Query: 124 GLARDTGLSVRIVQ 137
LA DTGL +R+VQ
Sbjct: 109 RLALDTGLDMRVVQ 122
>gi|306526228|sp|Q25132.2|LHX3_HALRO RecName: Full=LIM/homeobox protein Lhx3; Short=Hr-Lhx3; Short=LIM
homeobox protein 3; AltName: Full=LIM/homeobox protein
LIM; Short=HrLIM
Length = 692
Score = 95.9 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 18/133 (13%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + P E++ + DNV+H++ F C +C ++ G+QF +++ +L C+ DYE+
Sbjct: 340 KCTACGHGIPPTEVIRRAQDNVYHLEGFCCFLCHEKMGTGDQFYLLEDNRLVCKKDYEQ- 398
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
S+ D G KRPRT +T +Q K+++ SPKP R VRE
Sbjct: 399 ----------------AKSRDADIENGVKRPRTTITAKQLETLKSAYNQSPKPARHVREQ 442
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 443 LSSETGLDMRVVQ 455
>gi|410921498|ref|XP_003974220.1| PREDICTED: LIM/homeobox protein Lhx4-like [Takifugu rubripes]
Length = 389
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 76/133 (57%), Gaps = 19/133 (14%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DYE
Sbjct: 89 KCASCQQGIPPMQVVRKAQDFVYHLHCFACIMCSRQLATGDEFYLMEDGRLVCKVDYE-- 146
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
+ ++ D G KRPRT +T +Q K++++ SPKP R VRE
Sbjct: 147 ----------------AAKQNDDSEAGTKRPRTTITAKQLETLKSAYKNSPKPARHVREQ 190
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 191 LSSETGLDMRVVQ 203
>gi|118343872|ref|NP_001071755.1| LIM/homeobox protein Lhx3a type 1 [Ciona intestinalis]
gi|70570105|dbj|BAE06537.1| transcription factor protein [Ciona intestinalis]
Length = 596
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 18/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC GC + P ++V + DNV+H++CF C +C +L G+QF ++ +L C+ DY
Sbjct: 250 FGTKCSGCELAIPPTQVVRRAQDNVYHLECFRCFMCSEQLGTGDQFYLLDDSRLVCKKDY 309
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E S+ D G KRPRT +T +Q K ++ SPKP R V
Sbjct: 310 EH-----------------AKSRDLDMDNGIKRPRTTITAKQLETLKIAYNQSPKPARHV 352
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ DTGL +R+VQ
Sbjct: 353 REQLSSDTGLDMRVVQ 368
>gi|259013380|ref|NP_001158395.1| lim domain homeobox 3/4 transcription factor [Saccoglossus
kowalevskii]
gi|90659991|gb|ABD97272.1| lim domain homeobox 3/4 transcription factor [Saccoglossus
kowalevskii]
Length = 390
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 77/133 (57%), Gaps = 13/133 (9%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V + DNV+H+QCF CV+C +L G++F ++ +L C+ DY E
Sbjct: 93 KCSACDQGIPPTQVVRRAQDNVYHLQCFACVMCNRQLATGDEFYLMNDNKLVCKGDY--E 150
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
++G G DL + + KRPRT ++ +Q K ++ SPKP R VRE
Sbjct: 151 AAKVRG---GTDSDLEMDASN-------KRPRTTISAKQLETLKTAYANSPKPARHVREQ 200
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 201 LSSETGLDMRVVQ 213
>gi|242011465|ref|XP_002426470.1| LIM/homeobox protein Lhx3, putative [Pediculus humanus corporis]
gi|212510582|gb|EEB13732.1| LIM/homeobox protein Lhx3, putative [Pediculus humanus corporis]
Length = 394
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 79/141 (56%), Gaps = 7/141 (4%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P +LV K D VFH+ CF C+VC +L GE+ +V+ + C+ DY
Sbjct: 88 YGTKCGGCLQGISPSDLVRKARDKVFHLNCFTCMVCRKQLSTGEELYVLDDNKFICKEDY 147
Query: 62 EKEVEMLQGYAQGIPF--DLITSSKS-HDGRRGPKR--PRTILTTQQRRAFKASFEISPK 116
+ G G P D T +KS DG G KR PRT + +Q K +F +PK
Sbjct: 148 LTG-KTSSGSLDGDPETRDSQTENKSPDDGNSGSKRRGPRTTIKAKQLEILKNAFSQTPK 206
Query: 117 PCRKVREGLARDTGLSVRIVQ 137
P R +RE LA++TGL +R++Q
Sbjct: 207 PTRHIREQLAKETGLPMRVIQ 227
>gi|47225657|emb|CAG08000.1| unnamed protein product [Tetraodon nigroviridis]
Length = 363
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 60 FGTKCASCQKGIPPMQVVRKAQDFVYHLHCFACIMCSRQLATGDEFYLMEDGRLVCKVDY 119
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + ++ D G KRPRT +T +Q K++++ SPKP R V
Sbjct: 120 E------------------AAKQNDDSEAGTKRPRTTITAKQLETLKSAYKNSPKPARHV 161
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 162 REQLSSETGLDMRVVQ 177
>gi|371573886|gb|AEX38313.1| Lhx3 [Mnemiopsis leidyi]
Length = 507
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 75/136 (55%), Gaps = 6/136 (4%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
Y KC C + + P ++V + +VFH+ CFVC++C L G++F + QL CR DY
Sbjct: 181 YGTKCAKCEKVIPPSQVVRRAGGHVFHMDCFVCIICSRTLNTGDEFYFVDDNQLVCRSDY 240
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
+ YA D + + +G KRPRT +T +Q K ++E SPKP R V
Sbjct: 241 DN---FKTQYANCT--DETFTDELDLENQGIKRPRTTITAKQLETLKTAYENSPKPARHV 295
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 296 REQLSSETGLDMRVVQ 311
>gi|391342697|ref|XP_003745652.1| PREDICTED: LIM/homeobox protein Lhx1-like [Metaseiulus
occidentalis]
Length = 363
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 78/136 (57%), Gaps = 6/136 (4%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH++CF C+VC +L GE+ +V+ + + C+ DY
Sbjct: 61 FGTKCAGCAQGISPTDLVRRARSKVFHLKCFTCLVCRKQLSTGEELYVLDENRFICKEDY 120
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
+ + QG ++ RRG PRT + +Q KA+F +PKP R +
Sbjct: 121 LNQRQ--QGSGPESQMNVADDGNGSQKRRG---PRTTIKAKQLETLKAAFAATPKPTRHI 175
Query: 122 REGLARDTGLSVRIVQ 137
RE LA++TGL++R++Q
Sbjct: 176 REQLAQETGLNMRVIQ 191
>gi|258504705|gb|ACV72972.1| CEH-14 [Caenorhabditis remanei]
gi|258504707|gb|ACV72973.1| CEH-14 [Caenorhabditis remanei]
gi|258504709|gb|ACV72974.1| CEH-14 [Caenorhabditis remanei]
gi|258504713|gb|ACV72976.1| CEH-14 [Caenorhabditis remanei]
gi|258504717|gb|ACV72978.1| CEH-14 [Caenorhabditis remanei]
gi|258504719|gb|ACV72979.1| CEH-14 [Caenorhabditis remanei]
gi|258504721|gb|ACV72980.1| CEH-14 [Caenorhabditis remanei]
gi|258504723|gb|ACV72981.1| CEH-14 [Caenorhabditis remanei]
gi|258504727|gb|ACV72983.1| CEH-14 [Caenorhabditis remanei]
gi|258504729|gb|ACV72984.1| CEH-14 [Caenorhabditis remanei]
gi|258504731|gb|ACV72985.1| CEH-14 [Caenorhabditis remanei]
gi|258504733|gb|ACV72986.1| CEH-14 [Caenorhabditis remanei]
Length = 304
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 75/134 (55%), Gaps = 12/134 (8%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF--VIKQGQLFCRPDYEK 63
KC C+E + PD +V K +++HV+CF C +C L+ GE+F + +L C+ DYE+
Sbjct: 91 KCASCTEGIVPDHVVRKASGHIYHVECFTCFICKRTLETGEEFYLIADDARLVCKDDYEQ 150
Query: 64 EVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVRE 123
+ L G+P + +G KRPRT ++ + K +++ S KP R VRE
Sbjct: 151 ARDKL-----GLP-----DTAESEGDGSNKRPRTTISAKSLDTLKQAYQASSKPARHVRE 200
Query: 124 GLARDTGLSVRIVQ 137
LA +TGL +R+VQ
Sbjct: 201 QLAAETGLDMRVVQ 214
>gi|258504715|gb|ACV72977.1| CEH-14 [Caenorhabditis remanei]
gi|258504725|gb|ACV72982.1| CEH-14 [Caenorhabditis remanei]
Length = 304
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 75/134 (55%), Gaps = 12/134 (8%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF--VIKQGQLFCRPDYEK 63
KC C+E + PD +V K +++HV+CF C +C L+ GE+F + +L C+ DYE+
Sbjct: 91 KCASCTEGIVPDHVVRKASGHIYHVECFTCFICKRTLETGEEFYLIADDARLVCKDDYEQ 150
Query: 64 EVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVRE 123
+ L G+P + +G KRPRT ++ + K +++ S KP R VRE
Sbjct: 151 ARDKL-----GLP-----DTAESEGDGSNKRPRTTISAKSLDTLKQAYQASSKPARHVRE 200
Query: 124 GLARDTGLSVRIVQ 137
LA +TGL +R+VQ
Sbjct: 201 QLAAETGLDMRVVQ 214
>gi|258504735|gb|ACV72987.1| CEH-14 [Caenorhabditis remanei]
Length = 304
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 75/134 (55%), Gaps = 12/134 (8%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF--VIKQGQLFCRPDYEK 63
KC C+E + PD +V K +++HV+CF C +C L+ GE+F + +L C+ DYE+
Sbjct: 91 KCASCTEGIVPDHVVRKASGHIYHVECFTCFICKRTLETGEEFYLIADDARLVCKDDYEQ 150
Query: 64 EVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVRE 123
+ L G+P + +G KRPRT ++ + K +++ S KP R VRE
Sbjct: 151 ARDKL-----GLP-----DTAESEGDGSNKRPRTTISAKSLDTLKQAYQASSKPARHVRE 200
Query: 124 GLARDTGLSVRIVQ 137
LA +TGL +R+VQ
Sbjct: 201 QLAAETGLDMRVVQ 214
>gi|118344350|ref|NP_001071998.1| transcription factor protein [Ciona intestinalis]
gi|70570117|dbj|BAE06539.1| transcription factor protein [Ciona intestinalis]
Length = 505
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 91/186 (48%), Gaps = 53/186 (28%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQ--GQLFCRP-- 59
+++C C+ + DELV + + + +HV+CF C VC +LQ G+ ++I + Q+ C+
Sbjct: 107 LQRCRRCAGVIPRDELVRRVIGHPYHVKCFSCDVCHRQLQSGDHYLIDESYNQICCKACH 166
Query: 60 --------------------DYEKEVE--------MLQGYAQGIPFD------------- 78
D EK + + G A P+
Sbjct: 167 DRDDVIFESCFGAGEEDSASDSEKSDDDVFAQPPMHMAGGAHFSPYHGPPHHMGIMRSKN 226
Query: 79 -------LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGL 131
+ S + DG+R KRPRTILTT QRR FKASFE+S KPCRKVRE LA +TGL
Sbjct: 227 GSKTSPTMQHGSVTSDGKRS-KRPRTILTTAQRRKFKASFEVSQKPCRKVRETLASETGL 285
Query: 132 SVRIVQ 137
S R+VQ
Sbjct: 286 SPRVVQ 291
>gi|395513919|ref|XP_003761169.1| PREDICTED: LIM/homeobox protein Lhx5 [Sarcophilus harrisii]
Length = 383
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 31/172 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ ++I + + C+ DY
Sbjct: 72 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDY 131
Query: 62 EKEVEMLQGYAQGIPF--------DL--------------------ITSSKSHDGRRGPK 93
+ +G + DL T++++ + G K
Sbjct: 132 LNSPSVKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETTNNENEEQNSGTK 191
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQSRPIPV 143
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q+ +P+
Sbjct: 192 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQTVFVPI 243
>gi|363740116|ref|XP_001234553.2| PREDICTED: LIM/homeobox protein Lhx5 [Gallus gallus]
Length = 402
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GCS+ + P +LV K + VFH+ CF C+VC +L GE+ ++I + + C+ DY
Sbjct: 60 FGTKCAGCSQGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDY 119
Query: 62 EKEVEMLQGYAQGIPF--------DL--------------------ITSSKSHDGRRGPK 93
+ +G + DL T++++ + G K
Sbjct: 120 LNSPSLKEGSLNSVSSCTDRSLSPDLQDPMQDDTKETDNSTSSDKETTNNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G +QGI P DL+ +++
Sbjct: 62 TKCAGCSQGISPSDLVRKARN 82
>gi|229619776|dbj|BAH58087.1| LIM homeobox protein 1 [Nematostella vectensis]
Length = 358
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 80/144 (55%), Gaps = 14/144 (9%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P+++V + VFHV CFVC C ++ G++ + I G CR DY
Sbjct: 60 YGTKCSGCDQGISPNDMVRRAKHLVFHVDCFVCSYCKRQITTGDELYYIGDGSFICRDDY 119
Query: 62 --------EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEI 113
+ ++ + + G+ DL + S RRGP RT + +Q A K++F
Sbjct: 120 YHSHPTNLDDAIDEPKDLSYGLDEDLDAALASK--RRGP---RTTIKAKQLEALKSTFAA 174
Query: 114 SPKPCRKVREGLARDTGLSVRIVQ 137
+PKP R +RE LA++TGL++R++Q
Sbjct: 175 TPKPSRNIREKLAQETGLNMRVIQ 198
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD-YE 62
V++C GC + D+ ++K LD V+H QC C C L E+ ++G+LFC+ D Y
Sbjct: 2 VQQCAGCQLPIA-DKFLLKVLDGVWHAQCVQCSDCKCPLT--ERCFSREGKLFCKTDFYR 58
Query: 63 KEVEMLQGYAQGI-PFDLITSSK 84
+ G QGI P D++ +K
Sbjct: 59 RYGTKCSGCDQGISPNDMVRRAK 81
>gi|196011854|ref|XP_002115790.1| hypothetical protein TRIADDRAFT_30033 [Trichoplax adhaerens]
gi|190581566|gb|EDV21642.1| hypothetical protein TRIADDRAFT_30033 [Trichoplax adhaerens]
Length = 292
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 78/165 (47%), Gaps = 30/165 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQ-GQLFCRPDY 61
Y KC GC + P+ELV + D+V+H++C C +CG ++ GEQ I Q Q C+ DY
Sbjct: 59 YGTKCSGCGIGIPPNELVRRARDDVYHIKCLKCAICGRQMSTGEQLYINQHNQYICQADY 118
Query: 62 ----------------------------EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPK 93
EKE E DL + + G K
Sbjct: 119 QNSISSTNTSLNDQSLTDDKEDDNSDYDEKEDETEDLLDNNNEDDLQADNDNESGNNCKK 178
Query: 94 R-PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + T+Q K +F I+PKP R +RE LA+ TGL++R++Q
Sbjct: 179 RGPRTTIKTEQLEMLKNAFAITPKPTRLIRERLAQQTGLNMRVIQ 223
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC + D+ ++ LD +H +C C C ++Q E+ + G+L+CR D+
Sbjct: 4 CAGCQLPIC-DKFLLSVLDRKWHTKCVQCSQC--KVQLSEKCFSRDGKLYCRNDF 55
>gi|324516282|gb|ADY46481.1| Homeobox protein ceh-14 [Ascaris suum]
Length = 324
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 71/134 (52%), Gaps = 19/134 (14%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVI--KQGQLFCRPDYEK 63
KC C E + PD +V + D+V+HV CF CV+C L+ GEQF + G+L C+ DYE
Sbjct: 77 KCSVCEEGICPDSVVRRANDHVYHVACFQCVICKRELRTGEQFYLIPTDGRLVCKTDYE- 135
Query: 64 EVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVRE 123
+ +K D KRPRT ++ + K +++ S KP R VRE
Sbjct: 136 ----------------MAKNKETDVDCNNKRPRTTISAKSLETLKQAYQASSKPARHVRE 179
Query: 124 GLARDTGLSVRIVQ 137
LA DTGL +R+VQ
Sbjct: 180 QLAADTGLDMRVVQ 193
>gi|149551088|ref|XP_001517055.1| PREDICTED: LIM/homeobox protein Lhx5-like, partial [Ornithorhynchus
anatinus]
Length = 231
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 82/163 (50%), Gaps = 31/163 (19%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDYEKE 64
KC GC++ + P +LV K + VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 14 KCAGCAQGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKEDYLNS 73
Query: 65 VEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPKR-- 94
+ +G + D TSS ++ + G KR
Sbjct: 74 PSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDHSTSSDKEAANNENEEQNSGTKRRG 133
Query: 95 PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 134 PRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 176
>gi|56694836|gb|AAW23080.1| Lim3 [Oikopleura dioica]
Length = 289
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 18/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC C+E + P E++ K D+ +H++CF C VC R + G+ F+++ +L C+ DY
Sbjct: 96 YGNKCASCNEGIEPSEVIQKAGDHSYHLECFHCAVCDRRFETGDHFFLLEDKRLVCKEDY 155
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + +M +G G KRPRT +T +Q K +++ S KP R V
Sbjct: 156 E-DAKMREGQDDG----------------NIKRPRTTITAKQLDVLKQAYQQSSKPARHV 198
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 199 RESLSTETGLDMRVVQ 214
>gi|236201759|dbj|BAH58772.1| LIM homeodomain protein Hr-Lhx3 b-form [Halocynthia roretzi]
Length = 611
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 18/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P E++ + DNV+H++ F C +C ++ G+QF +++ +L C+ DY
Sbjct: 256 FGTKCTACGHGIPPTEVIRRAQDNVYHLEGFCCFLCHEKMGTGDQFYLLEDNRLVCKKDY 315
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E+ S+ D G KRPRT +T +Q K+++ SPKP R V
Sbjct: 316 EQ-----------------AKSRDADIENGVKRPRTTITAKQLETLKSAYNQSPKPARHV 358
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 359 REQLSSETGLDMRVVQ 374
>gi|189238568|ref|XP_969484.2| PREDICTED: similar to LIM homeobox 1b [Tribolium castaneum]
Length = 497
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 73/138 (52%), Gaps = 17/138 (12%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P +LV K D VFH+ CF C+VC +L GE+ +V+ + C+ DY
Sbjct: 209 YGTKCGGCGQGISPSDLVRKARDKVFHLNCFTCLVCRKQLSTGEELYVLDDNKFICKDDY 268
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCR 119
L G T+ D G KR PRT + +Q K +F +PKP R
Sbjct: 269 ------LNGNK--------TNKSPDDSSAGSKRRGPRTTIKAKQLEILKTAFSQTPKPTR 314
Query: 120 KVREGLARDTGLSVRIVQ 137
+RE LA++TGL +R++Q
Sbjct: 315 HIREQLAKETGLPMRVIQ 332
>gi|260793678|ref|XP_002591838.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
gi|229277049|gb|EEN47849.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
Length = 402
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 24/139 (17%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC GC + + P ++V + D ++H+QCF C++C +L G++F +++ +L C+ DY
Sbjct: 96 FGTKCAGCGQGIPPTQVVRRAQDKIYHLQCFACIMCKRQLATGDEFYLMEDAKLVCKSDY 155
Query: 62 E--KEVEM-LQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
E K+ EM L+G KRPRT +T +Q K +++ SPKP
Sbjct: 156 EAAKQREMELEGTQ--------------------KRPRTTITAKQLETLKQAYQNSPKPA 195
Query: 119 RKVREGLARDTGLSVRIVQ 137
R VRE L+++TGL +R+VQ
Sbjct: 196 RHVREQLSQETGLDMRVVQ 214
>gi|170586684|ref|XP_001898109.1| Homeobox protein ceh-14 [Brugia malayi]
gi|158594504|gb|EDP33088.1| Homeobox protein ceh-14, putative [Brugia malayi]
Length = 319
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 71/134 (52%), Gaps = 19/134 (14%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVI--KQGQLFCRPDYEK 63
KC C E + PD +V + ++V+HV CF C++C L+ GE+F + G+L C+ DYE
Sbjct: 76 KCSMCDEGICPDMVVRRANEHVYHVSCFQCIICKRELRTGEEFYLIPTDGRLVCKSDYE- 134
Query: 64 EVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVRE 123
+ SK D KRPRT ++ + K +++ S KP R VRE
Sbjct: 135 ----------------MAKSKETDIDSNTKRPRTTISAKSLETLKQAYQASSKPARHVRE 178
Query: 124 GLARDTGLSVRIVQ 137
LA DTGL +R+VQ
Sbjct: 179 QLAADTGLDMRVVQ 192
>gi|313234650|emb|CBY10605.1| unnamed protein product [Oikopleura dioica]
Length = 289
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 18/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC C+E + P E++ K D+ +H++CF C VC R + G+ F+++ +L C+ DY
Sbjct: 96 YGNKCASCNEGIEPSEVIRKAGDHSYHLECFHCAVCDRRFETGDHFFLLEDKRLVCKEDY 155
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E + +M +G G KRPRT +T +Q K +++ S KP R V
Sbjct: 156 E-DAKMREGQDDG----------------NIKRPRTTITAKQLDVLKQAYQQSSKPARHV 198
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 199 RESLSTETGLDMRVVQ 214
>gi|20502369|dbj|BAB91364.1| LIM homeodomain protein [Branchiostoma belcheri]
Length = 402
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 24/139 (17%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC GC + + P ++V + D ++H+QCF C++C +L G++F +++ +L C+ DY
Sbjct: 96 FGTKCAGCGQGIPPTQVVRRAQDKIYHLQCFACIMCKRQLATGDEFYLMEDAKLVCKSDY 155
Query: 62 E--KEVEM-LQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
E K+ EM L+G KRPRT +T +Q K +++ SPKP
Sbjct: 156 EAAKQREMELEGTQ--------------------KRPRTTITAKQLETLKQAYQNSPKPA 195
Query: 119 RKVREGLARDTGLSVRIVQ 137
R VRE L+++TGL +R+VQ
Sbjct: 196 RHVREQLSQETGLDMRVVQ 214
>gi|358333778|dbj|GAA52242.1| LIM homeobox protein 3/4, partial [Clonorchis sinensis]
Length = 405
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 75/133 (56%), Gaps = 18/133 (13%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC GC + P E+V DNV+H+ CF CV+C L G++F +++ +L C+ D+E
Sbjct: 46 KCAGCERGIPPTEVVRTAQDNVYHMDCFACVICDRLLNTGDEFYLLRDRKLMCKYDFET- 104
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
A+ +L +++K RPRT +T +Q A K ++ SPKP R VRE
Sbjct: 105 -------AKARESELDSANK---------RPRTTITAKQLEALKRAYNESPKPVRHVREQ 148
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 149 LSAETGLDMRVVQ 161
>gi|156379960|ref|XP_001631723.1| predicted protein [Nematostella vectensis]
gi|156218768|gb|EDO39660.1| predicted protein [Nematostella vectensis]
Length = 213
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 80/144 (55%), Gaps = 14/144 (9%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P+++V + VFHV CFVC C ++ G++ + I G CR DY
Sbjct: 60 YGTKCSGCDQGISPNDMVRRAKHLVFHVDCFVCSYCKRQITTGDELYYIGDGSFICRDDY 119
Query: 62 --------EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEI 113
+ ++ + + G+ DL + S RRGP RT + +Q A K++F
Sbjct: 120 YHSHPTNLDDAIDEPKDLSYGLDEDLDAALASK--RRGP---RTTIKAKQLEALKSTFAA 174
Query: 114 SPKPCRKVREGLARDTGLSVRIVQ 137
+PKP R +RE LA++TGL++R++Q
Sbjct: 175 TPKPSRNIREKLAQETGLNMRVIQ 198
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD-YE 62
V++C GC + D+ ++K LD V+H QC C C L E+ ++G+LFC+ D Y
Sbjct: 2 VQQCAGCQLPIA-DKFLLKVLDGVWHAQCVQCSDCKCPLT--ERCFSREGKLFCKTDFYR 58
Query: 63 KEVEMLQGYAQGI-PFDLITSSK 84
+ G QGI P D++ +K
Sbjct: 59 RYGTKCSGCDQGISPNDMVRRAK 81
>gi|327282632|ref|XP_003226046.1| PREDICTED: LIM/homeobox protein Lhx5-like [Anolis carolinensis]
Length = 400
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ ++I + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARGKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDY 119
Query: 62 EKEVEMLQGYAQGIPF--------DL--------------------ITSSKSHDGRRGPK 93
+ +G + DL T++++ + G K
Sbjct: 120 LSSASLKEGSLNSVSSCTDRSLSPDLQDPMQDDPKETDNSTSSDKETTNNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLI 80
G AQGI P DL+
Sbjct: 62 TKCAGCAQGISPSDLV 77
>gi|355564712|gb|EHH21212.1| hypothetical protein EGK_04224, partial [Macaca mulatta]
Length = 293
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 31/163 (19%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDYEKE 64
KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 63 KCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYLSS 122
Query: 65 VEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPKR-- 94
+ +G + D TSS ++ + G KR
Sbjct: 123 SSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTKRRG 182
Query: 95 PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 183 PRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNL--SEKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>gi|308512223|ref|XP_003118294.1| CRE-CEH-14 protein [Caenorhabditis remanei]
gi|308238940|gb|EFO82892.1| CRE-CEH-14 protein [Caenorhabditis remanei]
Length = 409
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 16/134 (11%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF--VIKQGQLFCRPDYEK 63
KC C+E + PD +V K +++HV+CF C +C L+ GE+F + +L C+ DYE+
Sbjct: 163 KCASCTEGIVPDHVVRKASGHIYHVECFTCFICKRTLETGEEFYLIADDARLVCKDDYEQ 222
Query: 64 EVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVRE 123
+ ++G DG KRPRT ++ + K +++ S KP R VRE
Sbjct: 223 ARDKHTAESEG------------DGSN--KRPRTTISAKSLDTLKQAYQASSKPARHVRE 268
Query: 124 GLARDTGLSVRIVQ 137
LA +TGL +R+VQ
Sbjct: 269 QLAAETGLDMRVVQ 282
>gi|355786560|gb|EHH66743.1| hypothetical protein EGM_03791, partial [Macaca fascicularis]
Length = 306
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNL--SEKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>gi|260793680|ref|XP_002591839.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
gi|229277050|gb|EEN47850.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
Length = 278
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 79/136 (58%), Gaps = 24/136 (17%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYE-- 62
KC GC + + P ++V + D ++H+QCF C++C +L G++F +++ +L C+ DYE
Sbjct: 99 KCAGCGQGIPPTQVVRRAQDKIYHLQCFACIMCKRQLATGDEFYLMEDAKLVCKSDYEAA 158
Query: 63 KEVEM-LQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
K+ EM L+G KRPRT +T +Q K +++ SPKP R V
Sbjct: 159 KQREMELEGTQ--------------------KRPRTTITAKQLETLKQAYQNSPKPARHV 198
Query: 122 REGLARDTGLSVRIVQ 137
RE L+++TGL +R+VQ
Sbjct: 199 REQLSQETGLDMRVVQ 214
>gi|258504711|gb|ACV72975.1| CEH-14 [Caenorhabditis remanei]
Length = 300
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 16/134 (11%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF--VIKQGQLFCRPDYEK 63
KC C+E + PD +V K +++HV+CF C +C L+ GE+F + +L C+ DYE+
Sbjct: 91 KCASCTEGIVPDHVVRKASGHIYHVECFTCFICKRTLETGEEFYLIADDARLVCKDDYEQ 150
Query: 64 EVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVRE 123
+ ++G DG KRPRT ++ + K +++ S KP R VRE
Sbjct: 151 ARDKHTAESEG------------DG--SNKRPRTTISAKSLDTLKQAYQASSKPARHVRE 196
Query: 124 GLARDTGLSVRIVQ 137
LA +TGL +R+VQ
Sbjct: 197 QLAAETGLDMRVVQ 210
>gi|432094974|gb|ELK26382.1| LIM/homeobox protein Lhx5 [Myotis davidii]
Length = 315
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 64 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 123
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 124 LSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTK 183
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 184 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 229
>gi|109098848|ref|XP_001111705.1| PREDICTED: LIM/homeobox protein Lhx5-like [Macaca mulatta]
gi|296213013|ref|XP_002753087.1| PREDICTED: LIM/homeobox protein Lhx5 [Callithrix jacchus]
gi|297693055|ref|XP_002823842.1| PREDICTED: LIM/homeobox protein Lhx5 [Pongo abelii]
gi|402887767|ref|XP_003907254.1| PREDICTED: LIM/homeobox protein Lhx5 [Papio anubis]
Length = 402
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>gi|256079939|ref|XP_002576241.1| lim homeobox protein [Schistosoma mansoni]
gi|350644840|emb|CCD60434.1| lim homeobox protein,putative [Schistosoma mansoni]
Length = 192
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 75/133 (56%), Gaps = 17/133 (12%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK--E 64
C GC + + D ++ N +H QC C +C L ++ +++ +L+CR DY K +
Sbjct: 9 CAGCHQPIW-DPYLLCIDHNTWHEQCVTCSICHCLLH--DKCLVRNEKLYCRNDYIKMDD 65
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
E+ + S S G+ KRPRTILT QRR FKA FE +PKP RK+RE
Sbjct: 66 DELYE-----------MDSDSESGKNS-KRPRTILTANQRRRFKAVFEFNPKPTRKIREA 113
Query: 125 LARDTGLSVRIVQ 137
LA +TGL++R+VQ
Sbjct: 114 LATETGLNIRVVQ 126
>gi|281343471|gb|EFB19055.1| hypothetical protein PANDA_014809 [Ailuropoda melanoleuca]
Length = 354
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>gi|11641283|ref|NP_071758.1| LIM/homeobox protein Lhx5 [Homo sapiens]
gi|332840493|ref|XP_001153819.2| PREDICTED: LIM/homeobox protein Lhx5 [Pan troglodytes]
gi|397525022|ref|XP_003832477.1| PREDICTED: LIM/homeobox protein Lhx5 [Pan paniscus]
gi|426374256|ref|XP_004053995.1| PREDICTED: LIM/homeobox protein Lhx5 [Gorilla gorilla gorilla]
gi|18202938|sp|Q9H2C1.1|LHX5_HUMAN RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5
gi|11527289|gb|AAG36963.1|AF291181_1 LHX5 protein [Homo sapiens]
gi|80475867|gb|AAI09231.1| LIM homeobox 5 [Homo sapiens]
gi|119618466|gb|EAW98060.1| LIM homeobox 5 [Homo sapiens]
gi|261861188|dbj|BAI47116.1| LIM homeobox 5 [synthetic construct]
Length = 402
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>gi|338727662|ref|XP_001915147.2| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5-like
[Equus caballus]
Length = 403
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKANLS--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>gi|17551226|ref|NP_509273.1| Protein CEH-14 [Caenorhabditis elegans]
gi|21264444|sp|P20271.3|HM14_CAEEL RecName: Full=Homeobox protein ceh-14
gi|8572736|gb|AAF77181.1|AF244368_1 LIM homeobox protein CEH-14 [Caenorhabditis elegans]
gi|351063218|emb|CCD71294.1| Protein CEH-14 [Caenorhabditis elegans]
Length = 351
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 16/134 (11%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF--VIKQGQLFCRPDYEK 63
KC C+E + PD +V K ++V+HV+CF C +C L+ GE+F + +L C+ DYE+
Sbjct: 106 KCSSCNEGIVPDHVVRKASNHVYHVECFQCFICKRSLETGEEFYLIADDARLVCKDDYEQ 165
Query: 64 EVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVRE 123
+ +G DG KRPRT ++ + K +++ S KP R VRE
Sbjct: 166 ARDKHCNELEG------------DGSN--KRPRTTISAKSLETLKQAYQTSSKPARHVRE 211
Query: 124 GLARDTGLSVRIVQ 137
LA +TGL +R+VQ
Sbjct: 212 QLASETGLDMRVVQ 225
>gi|395833990|ref|XP_003790000.1| PREDICTED: LIM/homeobox protein Lhx5 [Otolemur garnettii]
Length = 402
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>gi|268580151|ref|XP_002645058.1| C. briggsae CBR-CEH-14 protein [Caenorhabditis briggsae]
Length = 351
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 16/134 (11%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVI--KQGQLFCRPDYEK 63
KC C + + PD +V K +++HV+CF C +C L+ GE+F + +L C+ DYE+
Sbjct: 106 KCASCEDGIVPDHVVRKASGHIYHVECFNCFICKRLLETGEEFYLIPDDARLVCKDDYEQ 165
Query: 64 EVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVRE 123
+ ++G DG G KRPRT ++ + K +++ S KP R +RE
Sbjct: 166 ARDKQSAESEG------------DG--GNKRPRTTISAKSLETLKQAYQTSSKPARHIRE 211
Query: 124 GLARDTGLSVRIVQ 137
LA +TGL +R+VQ
Sbjct: 212 QLASETGLDMRVVQ 225
>gi|311270693|ref|XP_003132949.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5-like [Sus
scrofa]
Length = 402
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|7511466|pir||T34266 LIM homeobox protein ceh-14 - Caenorhabditis elegans
Length = 348
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 16/134 (11%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF--VIKQGQLFCRPDYEK 63
KC C+E + PD +V K ++V+HV+CF C +C L+ GE+F + +L C+ DYE+
Sbjct: 103 KCSSCNEGIVPDHVVRKASNHVYHVECFQCFICKRSLETGEEFYLIADDARLVCKDDYEQ 162
Query: 64 EVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVRE 123
+ +G DG KRPRT ++ + K +++ S KP R VRE
Sbjct: 163 ARDKHCNELEG------------DGSN--KRPRTTISAKSLETLKQAYQTSSKPARHVRE 208
Query: 124 GLARDTGLSVRIVQ 137
LA +TGL +R+VQ
Sbjct: 209 QLASETGLDMRVVQ 222
>gi|351694748|gb|EHA97666.1| LIM/homeobox protein Lhx5 [Heterocephalus glaber]
Length = 402
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKEDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>gi|344295258|ref|XP_003419329.1| PREDICTED: LIM/homeobox protein Lhx5-like [Loxodonta africana]
Length = 402
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>gi|156120769|ref|NP_001095531.1| LIM/homeobox protein Lhx5 [Bos taurus]
gi|151557071|gb|AAI50044.1| LHX5 protein [Bos taurus]
gi|296478515|tpg|DAA20630.1| TPA: LIM homeobox protein 5 [Bos taurus]
Length = 402
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>gi|431914229|gb|ELK15487.1| LIM/homeobox protein Lhx5 [Pteropus alecto]
Length = 402
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>gi|403281850|ref|XP_003932386.1| PREDICTED: LIM/homeobox protein Lhx5 [Saimiri boliviensis
boliviensis]
Length = 385
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>gi|327291516|ref|XP_003230467.1| PREDICTED: LIM/homeobox protein Lhx3-like, partial [Anolis
carolinensis]
Length = 314
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 20/133 (15%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V + D V+H+ CF C+VC +L G++F +++ +L C+ DYE
Sbjct: 5 KCAACQQGIPPTQVVRRAQDFVYHLHCFSCIVCKRQLATGDEFYLMEDSRLVCKADYE-- 62
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
++K + KRPRT +T +Q K+++ SPKP R VRE
Sbjct: 63 -----------------TAKQREAESTAKRPRTTITAKQLETLKSAYNNSPKPARHVREQ 105
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 106 LSSETGLDMRVVQ 118
>gi|440898273|gb|ELR49802.1| LIM/homeobox protein Lhx5, partial [Bos grunniens mutus]
Length = 376
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>gi|345790894|ref|XP_543409.3| PREDICTED: LIM/homeobox protein Lhx5 [Canis lupus familiaris]
Length = 402
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGCERPIL-DRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>gi|354497499|ref|XP_003510857.1| PREDICTED: LIM/homeobox protein Lhx5-like [Cricetulus griseus]
gi|344257745|gb|EGW13849.1| LIM/homeobox protein Lhx5 [Cricetulus griseus]
Length = 402
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C GC E+ D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDFFRRFG 61
Query: 67 M-LQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>gi|334327218|ref|XP_001378455.2| PREDICTED: LIM/homeobox protein Lhx5-like [Monodelphis domestica]
Length = 303
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 31/163 (19%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDYEKE 64
KC GC++ + P +LV K VFH+ CF C+VC +L GE+ ++I + + C+ DY
Sbjct: 63 KCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDYLNS 122
Query: 65 VEMLQGYAQGIPF--------DL--------------------ITSSKSHDGRRGPKR-- 94
+ +G + DL T++++ + G KR
Sbjct: 123 PSVKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETTNNENEEQNSGTKRRG 182
Query: 95 PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 183 PRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>gi|6678690|ref|NP_032525.1| LIM/homeobox protein Lhx5 [Mus musculus]
gi|20514764|ref|NP_620605.1| LIM/homeobox protein Lhx5 [Rattus norvegicus]
gi|47606426|sp|P61376.1|LHX5_RAT RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5; AltName: Full=Homeobox protein LIM-2
gi|47606427|sp|P61375.1|LHX5_MOUSE RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5
gi|531220|gb|AAA62162.1| amino acid feature: homeodomain, bp 895 .. 1074; amino acid
feature: LIM1, bp 373 .. 516; amino acid feature: LIM2,
bp 550 .. 705 [Rattus norvegicus]
gi|1388183|gb|AAC52842.1| LIM/homeodomain [Mus musculus]
gi|26329557|dbj|BAC28517.1| unnamed protein product [Mus musculus]
gi|26339568|dbj|BAC33455.1| unnamed protein product [Mus musculus]
gi|34784227|gb|AAH57585.1| LIM homeobox protein 5 [Mus musculus]
gi|74148661|dbj|BAE24281.1| unnamed protein product [Mus musculus]
gi|148687827|gb|EDL19774.1| LIM homeobox protein 5 [Mus musculus]
gi|149063463|gb|EDM13786.1| LIM homeobox protein 5 [Rattus norvegicus]
Length = 402
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>gi|291407015|ref|XP_002719805.1| PREDICTED: LIM homeobox protein 5 [Oryctolagus cuniculus]
Length = 402
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARGKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKEAANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLI 80
G AQGI P DL+
Sbjct: 62 TKCAGCAQGISPSDLV 77
>gi|440808056|gb|AGC24171.1| Lhx3/4, partial [Lymnaea stagnalis]
Length = 127
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 76/133 (57%), Gaps = 18/133 (13%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQG-QLFCRPDYEKE 64
KC C + + P E+V + +NV+H+ CF C++C +L G++F + + +L C+ DYE
Sbjct: 5 KCASCDKGIPPTEVVRRAQENVYHLDCFACLMCARQLNTGDEFYLMEDRKLVCKTDYEA- 63
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
A+ +++ +S+ KRPRT +T +Q A K ++ S KP R VRE
Sbjct: 64 -------AKAREYEMDSSN---------KRPRTTITAKQLEALKRAYNESNKPARHVREQ 107
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 108 LSAETGLDMRVVQ 120
>gi|449478428|ref|XP_002187534.2| PREDICTED: LIM/homeobox protein Lhx3 [Taeniopygia guttata]
Length = 665
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 20/133 (15%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V + D V+H+ CF C+VC +L G++F +++ +L C+ DYE
Sbjct: 86 KCAACHQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCKADYE-- 143
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
++K + KRPRT +T +Q K ++ SPKP R VRE
Sbjct: 144 -----------------TAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQ 186
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 187 LSSETGLDMRVVQ 199
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 19/92 (20%)
Query: 46 EQFVIKQGQLFCRPDYEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRR 105
E ++++ +L C+ DYE ++K + KRPRT +T +Q
Sbjct: 397 EFYLMEDSRLVCKGDYE-------------------TAKQREAESTAKRPRTTITAKQLE 437
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
K ++ SPKP R VRE L+ +TGL +R+VQ
Sbjct: 438 TLKNAYNNSPKPARHVREQLSSETGLDMRVVQ 469
>gi|410976694|ref|XP_003994749.1| PREDICTED: LIM/homeobox protein Lhx5 [Felis catus]
Length = 332
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC + + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCGQGISPSDLVRKARGKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSK 84
G QGI P DL+ ++
Sbjct: 62 TKCAGCGQGISPSDLVRKAR 81
>gi|72535130|ref|NP_001025506.1| LIM/homeobox protein Lhx3 [Gallus gallus]
gi|1708828|sp|P53412.1|LHX3_CHICK RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3; AltName: Full=Homeobox protein LIM-3
gi|531185|gb|AAA62174.1| amino acid feature: LIM1, bp 82 .. 225; amino acid feature: LIM2,
bp 259 .. 414; amino acid feature: homeodomain, bp 457
.. 636 [Gallus gallus]
Length = 395
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V + D V+H+ CF C+VC +L G++F +++ +L C+ DY
Sbjct: 83 FGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCKADY 142
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K ++ SPKP R V
Sbjct: 143 E-------------------TAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHV 183
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 184 REQLSSETGLDMRVVQ 199
>gi|354497582|ref|XP_003510898.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Cricetulus griseus]
gi|344256661|gb|EGW12765.1| LIM/homeobox protein Lhx3 [Cricetulus griseus]
Length = 403
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 91 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 150
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 151 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 191
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 192 REQLSSETGLDMRVVQ 207
>gi|293345789|ref|XP_002726117.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Rattus norvegicus]
gi|293357702|ref|XP_002729190.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Rattus norvegicus]
gi|149039301|gb|EDL93521.1| rCG45383, isoform CRA_a [Rattus norvegicus]
Length = 400
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 89 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 148
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 149 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 189
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 190 REQLSSETGLDMRVVQ 205
>gi|293345787|ref|XP_001078243.2| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Rattus norvegicus]
gi|293357700|ref|XP_001059910.2| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Rattus norvegicus]
gi|149039302|gb|EDL93522.1| rCG45383, isoform CRA_b [Rattus norvegicus]
Length = 402
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 91 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 150
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 151 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 191
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 192 REQLSSETGLDMRVVQ 207
>gi|395506420|ref|XP_003757530.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Sarcophilus
harrisii]
Length = 403
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 91 FGTKCAACQQGIPPTQVVRRAQDFVYHLHCFSCVVCKRQLATGDEFYLMEDSRLVCKADY 150
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K ++ SPKP R V
Sbjct: 151 E-------------------TAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHV 191
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 192 REQLSSETGLDMRVVQ 207
>gi|354497584|ref|XP_003510899.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Cricetulus griseus]
Length = 401
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 89 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 148
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 149 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 189
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 190 REQLSSETGLDMRVVQ 205
>gi|18308156|gb|AAL67847.1|AF461699_1 LIM homeobox protein [Gallus gallus]
Length = 214
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 20/133 (15%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V + D V+H+ CF C+VC +L G++F +++ +L C+ DYE
Sbjct: 86 KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCKADYE-- 143
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
++K + KRPRT +T +Q K ++ SPKP R VRE
Sbjct: 144 -----------------TAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQ 186
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 187 LSSETGLDMRVVQ 199
>gi|126302627|ref|XP_001366305.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 2 [Monodelphis
domestica]
Length = 403
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 91 FGTKCAACQQGIPPTQVVRRAQDFVYHLHCFSCVVCKRQLATGDEFYLMEDSRLVCKADY 150
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K ++ SPKP R V
Sbjct: 151 E-------------------TAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHV 191
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 192 REQLSSETGLDMRVVQ 207
>gi|89001116|ref|NP_001034742.1| LIM/homeobox protein Lhx3 [Mus musculus]
gi|598327|gb|AAB64178.1| homeodomain protein [Mus musculus]
gi|124375774|gb|AAI32557.1| LIM homeobox protein 3 [Mus musculus]
gi|124376794|gb|AAI32555.1| LIM homeobox protein 3 [Mus musculus]
Length = 402
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 91 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 150
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 151 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 191
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 192 REQLSSETGLDMRVVQ 207
>gi|62859483|ref|NP_001016082.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|89269010|emb|CAJ81605.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|189441838|gb|AAI67665.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|213624072|gb|AAI70608.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|213624092|gb|AAI70634.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
Length = 402
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GCS + P +LV K + VFH+ CF C+VC +L GE+ ++I + + C+ DY
Sbjct: 60 FGTKCAGCSLGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ + + D TSS ++ + G K
Sbjct: 120 ASASSLKESSLNSVSSCTDRSLSPDLQDPIQDESKETDHSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC E+ D ++ LD +HV+C C C L E+ ++G+L+C+ D+
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKTDF 56
>gi|1708829|sp|P50481.1|LHX3_MOUSE RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3; AltName: Full=Homeobox protein LIM-3; AltName:
Full=Homeobox protein P-LIM
gi|575517|gb|AAA62369.1| LIM-homeoprotein [Mus musculus]
gi|187956241|gb|AAI50690.1| Lhx3 protein [Mus musculus]
Length = 400
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 89 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 148
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 149 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 189
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 190 REQLSSETGLDMRVVQ 205
>gi|332833327|ref|XP_003312450.1| PREDICTED: LIM/homeobox protein Lhx3 [Pan troglodytes]
Length = 396
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 85 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 145 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 185
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 186 REQLSSETGLDMRVVQ 201
>gi|324511990|gb|ADY44978.1| Protein lin-11 [Ascaris suum]
Length = 368
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 78/167 (46%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLF-CRPDY 61
+ +C GC+ L ++LV + D VFHVQCF C VC +L GEQ I G F C+ DY
Sbjct: 59 FGTRCAGCNVALDRNDLVRRARDKVFHVQCFQCTVCQKKLDTGEQLYILNGNRFVCKHDY 118
Query: 62 EKEVEMLQGYA-----------------------------QGIPFDLITSSKSHDGRRGP 92
E+ G Q + D + S K D
Sbjct: 119 LANPELFAGGGGTSECGSEEIDEDCDEASDDIEESNSTGHQEVNGDSVCSGKLDDLSASA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLDTLKAAFASTPKPTRHIREQLAQETGLNMRVIQ 225
>gi|148676345|gb|EDL08292.1| mCG18748, isoform CRA_b [Mus musculus]
Length = 402
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 91 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 150
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 151 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 191
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 192 REQLSSETGLDMRVVQ 207
>gi|326923371|ref|XP_003207910.1| PREDICTED: LIM/homeobox protein Lhx3-like [Meleagris gallopavo]
Length = 399
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V + D V+H+ CF C+VC +L G++F +++ +L C+ DY
Sbjct: 87 FGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCKADY 146
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K ++ SPKP R V
Sbjct: 147 E-------------------TAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHV 187
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 188 REQLSSETGLDMRVVQ 203
>gi|326205258|dbj|BAJ84011.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 386
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 75 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 134
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 135 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 175
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 176 REQLSSETGLDMRVVQ 191
>gi|148676344|gb|EDL08291.1| mCG18748, isoform CRA_a [Mus musculus]
Length = 400
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 89 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 148
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 149 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 189
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 190 REQLSSETGLDMRVVQ 205
>gi|9971753|gb|AAG10399.1| lim-homeobox transcription factor LHX3 [Homo sapiens]
Length = 397
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G+ F +++ +L C+ DY
Sbjct: 91 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDDFYLMEDSRLVCKADY 150
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 151 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 191
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 192 REQLSSETGLDMRVVQ 207
>gi|402896089|ref|XP_003911140.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 3 [Papio anubis]
Length = 373
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 62 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 121
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 122 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 162
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 163 REQLSSETGLDMRVVQ 178
>gi|395844276|ref|XP_003794888.1| PREDICTED: LIM/homeobox protein Lhx3 [Otolemur garnettii]
Length = 402
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 91 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 150
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 151 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 191
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 192 REQLSSETGLDMRVVQ 207
>gi|312075006|ref|XP_003140224.1| hypothetical protein LOAG_04639 [Loa loa]
Length = 325
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 19/134 (14%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVI--KQGQLFCRPDYEK 63
KC C E + PD +V + ++V+HV CF C++C L+ GE+F + G+L C+ DYE
Sbjct: 75 KCSMCDEGICPDMVVRRANEHVYHVSCFQCIICKRELRTGEEFYLIPTDGRLVCKSDYE- 133
Query: 64 EVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVRE 123
+ +K D KRPRT ++ + K +++ S KP R +RE
Sbjct: 134 ----------------MAKTKETDIDSNTKRPRTTISAKSLEILKQAYQASSKPARHIRE 177
Query: 124 GLARDTGLSVRIVQ 137
LA DTGL +R+VQ
Sbjct: 178 QLAADTGLDMRVVQ 191
>gi|52354701|gb|AAH82847.1| Unknown (protein for MGC:81549) [Xenopus laevis]
Length = 402
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GCS + P +LV K + VFH+ CF C+VC +L GE+ ++I + + C+ DY
Sbjct: 60 FGTKCAGCSLGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDY 119
Query: 62 EKEVEMLQGYAQGIPF--------DL--------------------ITSSKSHDGRRGPK 93
+ + + DL T++++ + G K
Sbjct: 120 TSVSSLKESSLNSVSSCTDRSLSPDLQDPIKDESKETDHSTSSDKETTNNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|395506422|ref|XP_003757531.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Sarcophilus
harrisii]
Length = 401
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 89 FGTKCAACQQGIPPTQVVRRAQDFVYHLHCFSCVVCKRQLATGDEFYLMEDSRLVCKADY 148
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K ++ SPKP R V
Sbjct: 149 E-------------------TAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHV 189
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 190 REQLSSETGLDMRVVQ 205
>gi|403301480|ref|XP_003941417.1| PREDICTED: LIM/homeobox protein Lhx3 [Saimiri boliviensis
boliviensis]
Length = 397
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 86 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 145
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 146 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|296191171|ref|XP_002743509.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 3 [Callithrix jacchus]
Length = 373
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 62 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 121
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 122 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 162
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 163 REQLSSETGLDMRVVQ 178
>gi|402896087|ref|XP_003911139.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Papio anubis]
Length = 402
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 91 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 150
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 151 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 191
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 192 REQLSSETGLDMRVVQ 207
>gi|348574776|ref|XP_003473166.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3-like
[Cavia porcellus]
Length = 403
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 91 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 150
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 151 E-------------------AAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 191
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 192 REQLSSETGLDMRVVQ 207
>gi|297685716|ref|XP_002820429.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Pongo abelii]
Length = 402
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 91 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 150
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 151 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 191
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 192 REQLSSETGLDMRVVQ 207
>gi|30023847|ref|NP_835258.1| LIM/homeobox protein Lhx3 isoform a [Homo sapiens]
gi|12643415|sp|Q9UBR4.2|LHX3_HUMAN RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3
gi|7110143|gb|AAF36808.1|AF156888_1 LIM homeobox protein 3 isoform a [Homo sapiens]
gi|16565927|gb|AAL26314.1| LIM homeobox protein 3 [Homo sapiens]
gi|119608612|gb|EAW88206.1| LIM homeobox 3, isoform CRA_b [Homo sapiens]
gi|326205254|dbj|BAJ84009.1| LIM/homeobox protein Lhx3 [Homo sapiens]
gi|326205256|dbj|BAJ84010.1| LIM/homeobox protein Lhx3 [Homo sapiens]
gi|326205264|dbj|BAJ84014.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 397
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 86 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 145
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 146 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|402896085|ref|XP_003911138.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Papio anubis]
Length = 397
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 86 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 145
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 146 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|780314|gb|AAA73902.1| PLim [Mus musculus]
Length = 400
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 89 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 148
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 149 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 189
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 190 REQLSSETGLDMRVVQ 205
>gi|326931564|ref|XP_003211898.1| PREDICTED: LIM/homeobox protein Lhx1-like [Meleagris gallopavo]
Length = 222
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 6 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 65
Query: 62 ------EKEVEMLQGYAQGIP----------------------FDLITSSKSHDGRR-GP 92
KE + P D T S +D + G
Sbjct: 66 LNNSNTAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKETGSNENDDQNLGA 125
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 126 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 172
>gi|126302625|ref|XP_001366249.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 1 [Monodelphis
domestica]
Length = 401
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 89 FGTKCAACQQGIPPTQVVRRAQDFVYHLHCFSCVVCKRQLATGDEFYLMEDSRLVCKADY 148
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K ++ SPKP R V
Sbjct: 149 E-------------------TAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHV 189
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 190 REQLSSETGLDMRVVQ 205
>gi|114627514|ref|XP_001171072.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Pan troglodytes]
Length = 397
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 86 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 145
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 146 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|296191169|ref|XP_002743508.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Callithrix jacchus]
Length = 397
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 86 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 145
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 146 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|194226030|ref|XP_001918019.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3 [Equus
caballus]
Length = 401
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 89 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 148
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 149 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 189
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 190 REQLSSETGLDMRVVQ 205
>gi|7657303|ref|NP_055379.1| LIM/homeobox protein Lhx3 isoform b [Homo sapiens]
gi|7110145|gb|AAF36809.1|AF156889_1 LIM homeobox protein 3 isoform b [Homo sapiens]
gi|119608611|gb|EAW88205.1| LIM homeobox 3, isoform CRA_a [Homo sapiens]
gi|157169604|gb|AAI52819.1| LIM homeobox 3 [synthetic construct]
gi|162318656|gb|AAI56736.1| LIM homeobox 3 [synthetic construct]
gi|307685965|dbj|BAJ20913.1| LIM homeobox 3 [synthetic construct]
gi|326205262|dbj|BAJ84013.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 402
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 91 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 150
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 151 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 191
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 192 REQLSSETGLDMRVVQ 207
>gi|6572499|gb|AAF17291.1| LHX3 protein [Homo sapiens]
gi|6572501|gb|AAF17292.1| LHX3 protein [Homo sapiens]
Length = 370
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 59 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 118
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 119 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 159
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 160 REQLSSETGLDMRVVQ 175
>gi|308235933|ref|NP_001184116.1| LIM/homeobox protein Lhx3 [Canis lupus familiaris]
gi|300837161|gb|ADK38612.1| LIM homeodomain protein 3 isoform LHX3b [Canis lupus familiaris]
Length = 403
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 91 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 150
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 151 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 191
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 192 REQLSSETGLDMRVVQ 207
>gi|114627512|ref|XP_001171089.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Pan troglodytes]
Length = 402
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 91 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 150
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 151 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 191
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 192 REQLSSETGLDMRVVQ 207
>gi|393912072|gb|EFO23845.2| hypothetical protein LOAG_04639 [Loa loa]
Length = 319
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 19/134 (14%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVI--KQGQLFCRPDYEK 63
KC C E + PD +V + ++V+HV CF C++C L+ GE+F + G+L C+ DYE
Sbjct: 69 KCSMCDEGICPDMVVRRANEHVYHVSCFQCIICKRELRTGEEFYLIPTDGRLVCKSDYE- 127
Query: 64 EVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVRE 123
+ +K D KRPRT ++ + K +++ S KP R +RE
Sbjct: 128 ----------------MAKTKETDIDSNTKRPRTTISAKSLEILKQAYQASSKPARHIRE 171
Query: 124 GLARDTGLSVRIVQ 137
LA DTGL +R+VQ
Sbjct: 172 QLAADTGLDMRVVQ 185
>gi|296191167|ref|XP_002743507.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Callithrix jacchus]
Length = 402
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 91 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 150
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 151 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 191
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 192 REQLSSETGLDMRVVQ 207
>gi|84490413|ref|NP_001033709.1| LIM/homeobox protein Lhx3 [Bos taurus]
gi|62952823|gb|AAY23167.1| LIM homeodomain 3 protein b isoform [Bos taurus]
gi|62952825|gb|AAY23168.1| LIM homeodomain 3 protein b isoform [Bos taurus]
gi|296482071|tpg|DAA24186.1| TPA: LIM homeobox protein 3 [Bos taurus]
Length = 403
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 91 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 150
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 151 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 191
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 192 REQLSSETGLDMRVVQ 207
>gi|426222898|ref|XP_004005617.1| PREDICTED: LIM/homeobox protein Lhx3 [Ovis aries]
Length = 401
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 89 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 148
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 149 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 189
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 190 REQLSSETGLDMRVVQ 205
>gi|25453086|sp|O97581.1|LHX3_PIG RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3; AltName: Full=Homeobox protein LIM-3; AltName:
Full=Homeobox protein P-LIM
gi|4091889|gb|AAC99331.1| LIM homeodomain transcription factor [Sus scrofa]
Length = 383
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 71 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 130
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 131 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 171
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 172 REQLSSETGLDMRVVQ 187
>gi|109109777|ref|XP_001096075.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Macaca mulatta]
Length = 397
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 86 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 145
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 146 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|109109779|ref|XP_001096188.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Macaca mulatta]
Length = 402
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 91 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 150
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 151 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 191
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 192 REQLSSETGLDMRVVQ 207
>gi|351701911|gb|EHB04830.1| LIM/homeobox protein Lhx3 [Heterocephalus glaber]
Length = 448
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 137 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 196
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 197 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNASPKPARHV 237
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 238 REQLSSETGLDMRVVQ 253
>gi|410903464|ref|XP_003965213.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 3 [Takifugu
rubripes]
Length = 390
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 20/133 (15%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V + D V+H+ CF C+VC +L G+++ +++ +L C+ DYE
Sbjct: 77 KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKTDYE-- 134
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
++K + KRPRT +T +Q K ++ SPKP R VRE
Sbjct: 135 -----------------TAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQ 177
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 178 LSSETGLDMRVVQ 190
>gi|47218680|emb|CAG12404.1| unnamed protein product [Tetraodon nigroviridis]
Length = 444
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 20/133 (15%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V + D V+H+ CF C+VC +L G+++ +++ +L C+ DYE
Sbjct: 63 KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKTDYE-- 120
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
++K + KRPRT +T +Q K ++ SPKP R VRE
Sbjct: 121 -----------------TAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQ 163
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 164 LSSETGLDMRVVQ 176
>gi|348535047|ref|XP_003455013.1| PREDICTED: LIM/homeobox protein Lhx3-like [Oreochromis niloticus]
Length = 400
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V + D V+H+ CF C+VC +L G+++ +++ +L C+ DY
Sbjct: 83 FGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKADY 142
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K ++ SPKP R V
Sbjct: 143 E-------------------TAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHV 183
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 184 REQLSSETGLDMRVVQ 199
>gi|344308350|ref|XP_003422840.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Loxodonta africana]
Length = 401
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 89 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 148
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 149 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNNSPKPARHV 189
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 190 REQLSSETGLDMRVVQ 205
>gi|190336903|gb|AAI62627.1| LIM homeobox 3 [Danio rerio]
Length = 398
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 20/133 (15%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V + D V+H+ CF C+VC +L G+++ +++ +L C+ DYE
Sbjct: 86 KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKADYE-- 143
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
++K + KRPRT +T +Q K ++ SPKP R VRE
Sbjct: 144 -----------------TAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQ 186
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 187 LSTETGLDMRVVQ 199
>gi|18858975|ref|NP_571283.1| LIM/homeobox protein Lhx3 [Danio rerio]
gi|2497671|sp|Q90421.1|LHX3_DANRE RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3; AltName: Full=Homeobox protein LIM-3
gi|1000342|gb|AAA76714.1| LIM homeobox protein [Danio rerio]
Length = 398
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 20/133 (15%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V + D V+H+ CF C+VC +L G+++ +++ +L C+ DYE
Sbjct: 86 KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKADYE-- 143
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
++K + KRPRT +T +Q K ++ SPKP R VRE
Sbjct: 144 -----------------TAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQ 186
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 187 LSTETGLDMRVVQ 199
>gi|410903462|ref|XP_003965212.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 2 [Takifugu
rubripes]
Length = 406
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 20/133 (15%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V + D V+H+ CF C+VC +L G+++ +++ +L C+ DYE
Sbjct: 93 KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKTDYE-- 150
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
++K + KRPRT +T +Q K ++ SPKP R VRE
Sbjct: 151 -----------------TAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQ 193
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 194 LSSETGLDMRVVQ 206
>gi|410903460|ref|XP_003965211.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 1 [Takifugu
rubripes]
Length = 399
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 20/133 (15%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V + D V+H+ CF C+VC +L G+++ +++ +L C+ DYE
Sbjct: 86 KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKTDYE-- 143
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
++K + KRPRT +T +Q K ++ SPKP R VRE
Sbjct: 144 -----------------TAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQ 186
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 187 LSSETGLDMRVVQ 199
>gi|344308352|ref|XP_003422841.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Loxodonta africana]
Length = 403
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 91 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 150
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 151 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNNSPKPARHV 191
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 192 REQLSSETGLDMRVVQ 207
>gi|301611522|ref|XP_002935283.1| PREDICTED: LIM/homeobox protein Lhx3-like [Xenopus (Silurana)
tropicalis]
Length = 362
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 20/133 (15%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V + + V+H+ CF C+VC +L G++F +++ +L C+ DYE
Sbjct: 53 KCAACQQGIPPTQVVRRAQEFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCKGDYE-- 110
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
++K + KRPRT +T +Q K ++ SPKP R VRE
Sbjct: 111 -----------------TAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQ 153
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 154 LSSETGLDMRVVQ 166
>gi|148232304|ref|NP_001081623.1| LIM/homeobox protein Lhx3 [Xenopus laevis]
gi|547856|sp|P36200.1|LHX3_XENLA RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3; AltName: Full=Homeobox protein LIM-3; Short=xLIM-3
gi|407072|emb|CAA80402.1| Xlim-3 [Xenopus laevis]
gi|213623314|gb|AAI69580.1| Xlim-3 protein [Xenopus laevis]
Length = 395
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 20/133 (15%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V + + V+H+ CF C+VC +L G++F +++ +L C+ DYE
Sbjct: 86 KCAACQQGIPPTQVVRRAQEFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCKADYE-- 143
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
++K + KRPRT +T +Q K ++ SPKP R VRE
Sbjct: 144 -----------------TAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQ 186
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 187 LSSETGLDMRVVQ 199
>gi|157412000|gb|ABV54626.1| Lim homeobox protein 3 splice variant [Salmo salar]
Length = 379
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V + D V+H+ CF C+VC +L G+++ +++ +L C+ DY
Sbjct: 67 FGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKADY 126
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K ++ SPKP R V
Sbjct: 127 E-------------------TAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHV 167
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 168 REQLSSETGLDMRVVQ 183
>gi|209489466|gb|ACI49225.1| hypothetical protein Csp3_JD05.010 [Caenorhabditis angaria]
Length = 344
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 76/163 (46%), Gaps = 28/163 (17%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLF------ 56
Y ++C GC L +ELV + D VFH+QCF C VC L G+Q I +G F
Sbjct: 59 YGQRCAGCDGNLDKEELVRRARDKVFHIQCFQCSVCQRLLATGDQLYILEGNRFVCQTDF 118
Query: 57 ---------------------CRPDYEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKR- 94
C D E++ + I D++ S D +R
Sbjct: 119 QNATKTSTPTSSHRPLSNGSDCASDIEEDTICDEFQVDEIDGDMMGKDNSDDSNSAKRRG 178
Query: 95 PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PRT + +Q K++F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 PRTTIKAKQLETLKSAFAATPKPTRHIREQLAQETGLNMRVIQ 221
>gi|171544941|ref|NP_001116387.1| LIM/homeobox protein Lhx3 [Oryzias latipes]
gi|157410515|gb|ABV53980.1| LIM/homeobox protein Lhx3 [Oryzias latipes]
Length = 401
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V + D V+H+ CF C+VC +L G+++ +++ +L C+ DY
Sbjct: 86 FGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKTDY 145
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K ++ SPKP R V
Sbjct: 146 E-------------------TAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>gi|211971017|ref|NP_001130018.1| LIM/homeobox protein Lhx3 [Salmo salar]
gi|157412002|gb|ABV54627.1| Lim homeobox protein 3 [Salmo salar]
Length = 395
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V + D V+H+ CF C+VC +L G+++ +++ +L C+ DY
Sbjct: 83 FGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKADY 142
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K ++ SPKP R V
Sbjct: 143 E-------------------TAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHV 183
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 184 REQLSSETGLDMRVVQ 199
>gi|260828933|ref|XP_002609417.1| LIM class homeodomain transcription factor, Lhx6/8 subclass
[Branchiostoma floridae]
gi|229294773|gb|EEN65427.1| LIM class homeodomain transcription factor, Lhx6/8 subclass
[Branchiostoma floridae]
Length = 292
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C + ++ V + +V+H+ CF C C +L GE+F + G++ C+ Y
Sbjct: 108 FGTKCAKCCRNIQSNDWVRRAKTHVYHLACFACDACKRQLSTGEEFALHDGKVLCKSHYL 167
Query: 63 KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
+ ++ G G D + S +S G PKR RT T +Q R +A+F I P +
Sbjct: 168 EAMDAAAGSGNGSDCDSLYSGESGSGGHRPKRVRTTFTEEQLRVLQANFNIDSNPDGQDL 227
Query: 123 EGLARDTGLSVRIVQ 137
E +A+ TGLS R+ Q
Sbjct: 228 ERIAQITGLSKRVTQ 242
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 7 CLGCSEKLGP--DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC GP D+ ++K + +HV+C C VC + L R ++ +FC+ DY
Sbjct: 51 CTGCG---GPIQDKFLLKVGERQWHVKCLRCSVCQTPLGRHTTCYTREADVFCKADY 104
>gi|147902022|ref|NP_001084038.1| LIM/homeobox protein Lhx5 [Xenopus laevis]
gi|1708831|sp|P37137.2|LHX5_XENLA RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5; AltName: Full=Homeobox protein LIM-5; Short=xLIM-5;
AltName: Full=xLIM-2A
gi|840658|gb|AAA99464.1| LIM class homeodomain protein [Xenopus laevis]
gi|54311470|gb|AAH84744.1| Lim5/Lhx5 protein [Xenopus laevis]
Length = 402
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GCS + P +LV K + VFH+ CF C+VC +L GE+ ++I + + C+ DY
Sbjct: 60 FGTKCAGCSLGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ + + D TSS ++ + G K
Sbjct: 120 ISASSLKESSLNSVSSCTDRSLSPDIQDPIQDESKETDHSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFIATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
+ C GC E+ D ++ LD +HV+C C C L E+ ++G+L+C+ D+
Sbjct: 2 MAHCAGC-ERPILDRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKTDF 56
>gi|27652286|gb|AAO17712.1| homeodomain protein LMX1b [Rattus norvegicus]
Length = 105
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 64/105 (60%), Gaps = 27/105 (25%)
Query: 42 LQRGEQFVIKQGQLFCRPDYEKEVEMLQGYAQGIPFDLITSSKSHD-------------- 87
L++G++FV+K+GQL C+ DYEKE ++L + D S KS D
Sbjct: 4 LRKGDEFVLKEGQLLCKGDYEKEKDLLSS----VSPDESDSVKSEDEDGDMKPAKGQGSQ 59
Query: 88 -------GR--RGPKRPRTILTTQQRRAFKASFEISPKPCRKVRE 123
G+ R PKRPRTILTTQQRRAFKASFE+S KPCRKVRE
Sbjct: 60 NKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRE 104
>gi|395531962|ref|XP_003768042.1| PREDICTED: LIM/homeobox protein Lhx1 [Sarcophilus harrisii]
Length = 406
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 ------EKEVEMLQGYAQGIP----------------------FDLITSSKSHDGRR-GP 92
KE + P D T S +D + G
Sbjct: 119 LSNSSAAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKETGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>gi|45382269|ref|NP_990744.1| LIM/homeobox protein Lhx1 [Gallus gallus]
gi|1708826|sp|P53411.1|LHX1_CHICK RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1
gi|531183|gb|AAA62173.1| amino acid feature: homeodomain, bp 674 .. 853; amino acid feature:
LIM2, bp 326 .. 481; amino acid feature: LIM1, bp 149
..292 [Gallus gallus]
Length = 406
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 ------EKEVEMLQGYAQGIP----------------------FDLITSSKSHDGRR-GP 92
KE + P D T S +D + G
Sbjct: 119 LNNSNTAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKETGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>gi|18858973|ref|NP_571291.1| LIM/homeobox protein Lhx1 [Danio rerio]
gi|2497670|sp|Q90476.1|LHX1_DANRE RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1
gi|577525|gb|AAA92157.1| homeodomain protein [Danio rerio]
gi|190336961|gb|AAI62664.1| LIM homeobox 1a [Danio rerio]
gi|190339482|gb|AAI62396.1| LIM homeobox 1a [Danio rerio]
Length = 405
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P++LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPNDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKDDY 118
Query: 62 -----EKEVEMLQGYAQGIP----------------------FDLITSSKSHDGRR-GPK 93
K+ +L A P D T + +D + G K
Sbjct: 119 LSNTNGKDSNLLSVTACSDPSLSPDSQDQLQDDVKDAEIANLSDKETGNNENDDQNLGGK 178
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 224
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C GC E+ D ++ LD +H++C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRRFG 60
Query: 67 M-LQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPNDLVRRARS 81
>gi|348532229|ref|XP_003453609.1| PREDICTED: LIM/homeobox protein Lhx1-like [Oreochromis niloticus]
Length = 407
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 33/168 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GCS+ + P++LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCGGCSQGISPNDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKDDY 118
Query: 62 -----EKEVEMLQGYAQGIPF-----------DLI--------------TSSKSHDGRRG 91
K+ +L A P D++ ++++ D G
Sbjct: 119 LNNTSVKDTNLLSVTACSDPSLSPDSQDQLQDDVVLKDTEIATLSDKETVNNENDDQNLG 178
Query: 92 PKR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 GKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 226
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGC-ERPILDRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGRLYCKNDFFRRFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G +QGI P DL+ ++S
Sbjct: 61 TKCGGCSQGISPNDLVRRARS 81
>gi|371573888|gb|AEX38314.1| Lmx [Mnemiopsis leidyi]
Length = 428
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 81/142 (57%), Gaps = 13/142 (9%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIK-QGQLFCRP 59
+L C C+ + ++LV + +++H++CF C C S L++G+++V+ G L C+
Sbjct: 121 ILDASTCCTCNGSINANDLVYRVHGSLYHIRCFTCTRCSSSLRKGDEYVMHGNGDLVCKT 180
Query: 60 DYEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRR----AFKASFEISP 115
+ + L+ + F L RR KRPRT+L++ QR+ FK +F+ +P
Sbjct: 181 CSD---DGLRDH-----FYLGVDPSCRRDRREVKRPRTVLSSVQRKEHLSVFKEAFDRTP 232
Query: 116 KPCRKVREGLARDTGLSVRIVQ 137
+PCRK RE L+ TGLSVR+VQ
Sbjct: 233 RPCRKEREKLSSQTGLSVRVVQ 254
>gi|391759011|dbj|BAM22649.1| LIM homeobox 3/4, partial [Eptatretus burgeri]
Length = 205
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 71/136 (52%), Gaps = 18/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC GC + + P + V K + VFH+ CF C +CG +L G+ F ++ +L C+ DY
Sbjct: 87 FGTKCAGCRQGIPPSQAVRKAQERVFHLHCFACSLCGRQLATGDLFYLLDDARLVCQHDY 146
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
T+ + + KRPRT +T +Q K +++ SPKP R V
Sbjct: 147 PG-----------------TAHRDSEVDGAAKRPRTTITAKQLETLKNAYKSSPKPARHV 189
Query: 122 REGLARDTGLSVRIVQ 137
RE LA +TGL +R+VQ
Sbjct: 190 REQLASETGLDMRVVQ 205
>gi|348535371|ref|XP_003455174.1| PREDICTED: LIM/homeobox protein Lhx5-like [Oreochromis niloticus]
Length = 396
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 85/166 (51%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC + + P++LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCLQGISPNDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 E-----KEVEM--------------LQGYAQGI--PFDLITSS-------KSHDGRRGPK 93
KEV + LQ Q D TSS ++ + G K
Sbjct: 120 LSSGAIKEVNLNSVSSCTDRSLSPDLQDPIQDDIKETDNSTSSDKETNNIENEEQNSGAK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|432885359|ref|XP_004074682.1| PREDICTED: LIM/homeobox protein Lhx5-like [Oryzias latipes]
Length = 396
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC + + P++LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCLQGISPNDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKEDY 119
Query: 62 E-----KEVEML-------QGYAQGIP---------FDLITSS-------KSHDGRRGPK 93
KEV + + + +P D TSS ++ + G K
Sbjct: 120 LSPGSIKEVSLNSVSSCTDRSLSPDLPDPTQDDIKETDNSTSSDKETNNIENEEQNSGAK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|154147696|ref|NP_001093698.1| LIM homeobox 1 [Xenopus (Silurana) tropicalis]
gi|138519843|gb|AAI35732.1| lhx1 protein [Xenopus (Silurana) tropicalis]
Length = 409
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 35/170 (20%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 EKEVEMLQGYAQGIPFDLITSS--------------------------------KSHDGR 89
A+ F +T S ++ D
Sbjct: 119 LNNNNNNNNAAKENSFISVTGSDPSLSPESQDPLQDDAKDSESANISDKEAGVNENDDQN 178
Query: 90 RGPKR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
G KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 228
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGC-ERPILDRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRRFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>gi|62020648|gb|AAH20470.1| LHX1 protein, partial [Homo sapiens]
Length = 260
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 32/164 (19%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY--- 61
KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 62 KCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLSN 121
Query: 62 ---EKEVEMLQGYAQGIPF-----------------------DLITSSKSHDGRRGPKR- 94
KE + P S+++ D G KR
Sbjct: 122 SSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEAGSNENDDQNLGAKRR 181
Query: 95 -PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 182 GPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPI-LDRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>gi|351696664|gb|EHA99582.1| LIM/homeobox protein Lhx1 [Heterocephalus glaber]
Length = 406
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 32/171 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 EKEVEM-----LQGYAQGIPFDLIT------------------------SSKSHDGRRGP 92
+ L G L S+++ D G
Sbjct: 119 LSNSNVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQSRPI 141
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q R +
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVRAL 229
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 67 M-LQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>gi|391342699|ref|XP_003745653.1| PREDICTED: LIM/homeobox protein Lhx1-like [Metaseiulus
occidentalis]
Length = 405
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC + + P +LV + VFH++CF C+VC +L GE+ +V+ + + C+ DY
Sbjct: 61 FGTKCAGCGQGISPTDLVRRARSKVFHLKCFTCLVCRKQLSTGEELYVLDENRFICKEDY 120
Query: 62 ----EKEVEMLQGYAQ----GIPFDLIT--------------------SSKSHDGRRGPK 93
++E L ++ G+P ++ ++ DG G K
Sbjct: 121 LNQRQQEKNSLNIISRCNDAGLPPNIEDPALPGLKRPDSGGSGPESGQANAPDDGSGGQK 180
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 181 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 226
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C GC + D ++ LD +H +C C C R E+ + G+L+CR D+ K
Sbjct: 6 CAGCERPI-LDRFLLHVLDRSWHAKCVQCTDC--RCSLIEKCFSRDGKLYCRSDFYKRFG 62
Query: 67 M-LQGYAQGI-PFDLITSSKS 85
G QGI P DL+ ++S
Sbjct: 63 TKCAGCGQGISPTDLVRRARS 83
>gi|18858979|ref|NP_571282.1| LIM homeobox 1b [Danio rerio]
gi|2155289|gb|AAB58796.1| LIM class homeodomain protein [Danio rerio]
gi|190336839|gb|AAI62280.1| LIM homeobox 1b [Danio rerio]
gi|190340149|gb|AAI62303.1| LIM homeobox 1b [Danio rerio]
Length = 402
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 30/165 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC++ + P +LV K VFH+ CF C++C +L GE+ +++ + + C+ DY
Sbjct: 59 YGTKCGGCAQGISPSDLVRKARSKVFHLNCFTCIMCNKQLSTGEELYILDEYKFVCKEDY 118
Query: 62 -----EKEVEML---------------------QGYAQGIPFDLITSSKSHDGRR-GPKR 94
K+ +L + G D T + +D + G KR
Sbjct: 119 LNNSNGKDTNLLSITTCSDPSLSPESQDPQDDYKDSESGPMSDKETCNNENDEQNLGGKR 178
Query: 95 --PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 223
>gi|30410785|ref|NP_005559.2| LIM/homeobox protein Lhx1 [Homo sapiens]
gi|60416412|sp|P48742.2|LHX1_HUMAN RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1; Short=hLim-1
gi|75517203|gb|AAI01675.1| LIM homeobox 1 [Homo sapiens]
gi|85565997|gb|AAI11937.1| LIM homeobox 1 [Homo sapiens]
gi|119577978|gb|EAW57574.1| LIM homeobox 1 [Homo sapiens]
gi|167773161|gb|ABZ92015.1| LIM homeobox 1 [synthetic construct]
gi|208966670|dbj|BAG73349.1| LIM homeobox 1 [synthetic construct]
Length = 406
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 ------EKEVEMLQGYAQGIPF-----------------------DLITSSKSHDGRRGP 92
KE + P S+++ D G
Sbjct: 119 LSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEAGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>gi|2641222|gb|AAB86860.1| homeobox protein LIM-3 [Danio rerio]
Length = 374
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 20/133 (15%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V + D V+H+ C C+VC +L G+++ +++ +L C+ DYE
Sbjct: 62 KCAACQQGIPPTQVVRRAQDFVYHLHCNACIVCKRQLATGDEYYLMEDSRLVCKADYE-- 119
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
++K + KRPRT +T +Q K ++ SPKP R VRE
Sbjct: 120 -----------------TAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQ 162
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 163 LSTETGLDMRVVQ 175
>gi|432113616|gb|ELK35898.1| LIM/homeobox protein Lhx1 [Myotis davidii]
Length = 272
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 ------EKEVEMLQGYAQGIPF----------DLITSSKS-------------HDGRRGP 92
KE + P D S+S D G
Sbjct: 119 LSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPI-LDRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>gi|1621629|gb|AAD12189.1| putative transcription factor LIM-6 [Caenorhabditis elegans]
Length = 101
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 62/104 (59%), Gaps = 4/104 (3%)
Query: 28 FHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVEMLQGYAQGIPF-DLITSSKSH 86
+H QCF C C G+++ + G++FCR DY+ + Q + P + + S+ H
Sbjct: 1 YHAQCFSCCSCQRPFNLGDEYHVFDGEVFCRNDYQS-ICNFQTISNPDPLMEEVVRSEIH 59
Query: 87 DGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTG 130
R+ PKRPRTIL QQRR FK +FE S KP RKVRE LA +TG
Sbjct: 60 --RKTPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETG 101
>gi|190361014|gb|ACE76893.1| Lim1, partial [Emys orbicularis]
Length = 261
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 32/164 (19%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY--- 61
KC GC++ + P LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 28 KCAGCAQGISPSNLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLNN 87
Query: 62 ---EKEVEMLQGYAQGIPF----------DLITSSKS-------------HDGRRGPKR- 94
KE + P D S+S D G KR
Sbjct: 88 SNTAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEAGNNENDDQNLGAKRR 147
Query: 95 -PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 148 GPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 191
>gi|348525932|ref|XP_003450475.1| PREDICTED: LIM/homeobox protein Lhx1-like [Oreochromis niloticus]
Length = 399
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 29/164 (17%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF CV+C +L GE+ +++ + + C+ DY
Sbjct: 59 FGTKCAGCAQGILPSDLVRRAKSKVFHLNCFTCVMCNKQLSTGEELYILDEFKFVCKEDY 118
Query: 62 E----KEVEML---------------------QGYAQGIPFDLITSSKSHDGRR--GPKR 94
E K+ +L + G D T S +D + G +R
Sbjct: 119 ENNSGKDTILLSVTTCSDPSLSPDSQDPQDDGKDSENGHLSDKDTCSNENDEQSAVGKRR 178
Query: 95 -PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PRT + +Q KA+F +PKP R +RE L+R+TGL++R++Q
Sbjct: 179 GPRTTIKAKQLETLKAAFAATPKPTRHIREQLSRETGLNMRVIQ 222
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
+C C EK D ++K LD +H++C C C L E+ ++G+L+C+ D+ ++
Sbjct: 3 QCASC-EKPILDRFLLKVLDRPWHIKCVQCCDCKCSLT--EKCFSREGKLYCKNDFFRKF 59
Query: 66 -EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ +KS
Sbjct: 60 GTKCAGCAQGILPSDLVRRAKS 81
>gi|344285733|ref|XP_003414614.1| PREDICTED: LIM/homeobox protein Lhx1-like [Loxodonta africana]
Length = 406
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 EKEVEM-----LQGYAQGIPFDLIT------------------------SSKSHDGRRGP 92
+ L G L S+++ D G
Sbjct: 119 LSNSSLAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 67 M-LQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>gi|46394864|gb|AAS91588.1| Lim1 [Oryctolagus cuniculus]
Length = 348
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 1 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 60
Query: 62 ------EKEVEMLQGYAQGIPF----------DLITSSKS-------------HDGRRGP 92
KE + P D S+S D G
Sbjct: 61 LSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGA 120
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 121 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 167
>gi|8248965|gb|AAC60669.2| lateral and intermediate mesoderm differentiation and neurogenesis
protein [Mus sp.]
Length = 407
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 EKEVEM-----LQGYAQGIPFDLIT------------------------SSKSHDGRRGP 92
+ L G L S+++ D G
Sbjct: 119 LSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|332258740|ref|XP_003278453.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1 [Nomascus
leucogenys]
Length = 374
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 EKEVEM-----LQGYAQGIPFDLIT------------------------SSKSHDGRRGP 92
+ L G L S+++ D G
Sbjct: 119 LSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 67 M-LQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>gi|296201935|ref|XP_002748333.1| PREDICTED: LIM/homeobox protein Lhx1 [Callithrix jacchus]
Length = 406
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 EKEVEM-----LQGYAQGIPFDLIT------------------------SSKSHDGRRGP 92
+ L G L S+++ D G
Sbjct: 119 LSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>gi|449479889|ref|XP_004177057.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1
[Taeniopygia guttata]
Length = 419
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 32/172 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + + DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVDKEDY 118
Query: 62 ------EKEVEMLQGYAQGIPF----------------------DLITSSKSHDGRR-GP 92
KE + P D T S +D + G
Sbjct: 119 LNNSNTAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKETGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQSRPIP 142
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q P P
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVPPPP 230
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 67 M-LQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>gi|291405647|ref|XP_002719296.1| PREDICTED: LIM homeobox protein 5 [Oryctolagus cuniculus]
Length = 406
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 EKEVEM-----LQGYAQGIPFDLIT------------------------SSKSHDGRRGP 92
+ L G L S+++ D G
Sbjct: 119 LSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>gi|157428018|ref|NP_001098917.1| LIM/homeobox protein Lhx1 [Bos taurus]
gi|358417202|ref|XP_003583582.1| PREDICTED: LIM/homeobox protein Lhx1-like [Bos taurus]
gi|157279406|gb|AAI53213.1| LHX1 protein [Bos taurus]
gi|296477035|tpg|DAA19150.1| TPA: LIM homeobox protein 1 [Bos taurus]
gi|440905066|gb|ELR55504.1| LIM/homeobox protein Lhx1 [Bos grunniens mutus]
Length = 406
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 EKEVEM-----LQGYAQGIPFDLIT------------------------SSKSHDGRRGP 92
+ L G L S+++ D G
Sbjct: 119 LSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>gi|74187870|dbj|BAE24561.1| unnamed protein product [Mus musculus]
Length = 406
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 EKEVEM-----LQGYAQGIPFDLIT------------------------SSKSHDGRRGP 92
+ L G L S+++ D G
Sbjct: 119 LSNSSVAKENSLNSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D L++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRLLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>gi|148225925|ref|NP_001084128.1| LIM/homeobox protein Lhx1 [Xenopus laevis]
gi|267419|sp|P29674.1|LHX1_XENLA RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1; Short=Xlim1;
Short=x-Lhx1; Short=xLIM-1
gi|64830|emb|CAA45353.1| homeobox protein [Xenopus laevis]
gi|213623130|gb|AAI69338.1| Homeobox protein [Xenopus laevis]
gi|213623134|gb|AAI69340.1| Homeobox protein [Xenopus laevis]
Length = 403
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 -----------------------EKEVEMLQGYAQGIPFDLITS-----SKSHDGRRGPK 93
+ + LQ A+ ++ +++ D G K
Sbjct: 119 LNNNNAAKENSFISVTGSDPSLSPESQDPLQDDAKDSESANVSDKEAGINENDDQNLGAK 178
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 224
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGC-ERPILDRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRRFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>gi|76573889|ref|NP_001029088.1| LIM/homeobox protein Lhx1 [Pan troglodytes]
gi|297700651|ref|XP_002827352.1| PREDICTED: LIM/homeobox protein Lhx1 [Pongo abelii]
gi|311267821|ref|XP_003131754.1| PREDICTED: LIM/homeobox protein Lhx1-like [Sus scrofa]
gi|348567695|ref|XP_003469634.1| PREDICTED: LIM/homeobox protein Lhx1-like [Cavia porcellus]
gi|359320451|ref|XP_003639347.1| PREDICTED: LIM/homeobox protein Lhx1-like [Canis lupus familiaris]
gi|397494263|ref|XP_003818003.1| PREDICTED: LIM/homeobox protein Lhx1 [Pan paniscus]
gi|402899902|ref|XP_003912923.1| PREDICTED: LIM/homeobox protein Lhx1 [Papio anubis]
gi|403274736|ref|XP_003929119.1| PREDICTED: LIM/homeobox protein Lhx1 [Saimiri boliviensis
boliviensis]
gi|410980542|ref|XP_003996636.1| PREDICTED: LIM/homeobox protein Lhx1 [Felis catus]
gi|426348609|ref|XP_004041924.1| PREDICTED: LIM/homeobox protein Lhx1 [Gorilla gorilla gorilla]
gi|60389888|sp|Q5IS44.1|LHX1_PANTR RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1
gi|60389889|sp|Q5IS89.1|LHX1_SAIBB RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1
gi|56122252|gb|AAV74277.1| LIM homeobox protein 1 [Saimiri boliviensis]
gi|56122342|gb|AAV74322.1| LIM homeobox protein 1 [Pan troglodytes]
gi|355568607|gb|EHH24888.1| LIM/homeobox protein Lhx1 [Macaca mulatta]
gi|444720995|gb|ELW61755.1| LIM/homeobox protein Lhx1 [Tupaia chinensis]
Length = 406
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 EKEVEM-----LQGYAQGIPFDLIT------------------------SSKSHDGRRGP 92
+ L G L S+++ D G
Sbjct: 119 LSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>gi|6678688|ref|NP_032524.1| LIM/homeobox protein Lhx1 [Mus musculus]
gi|94400804|ref|NP_665887.3| LIM/homeobox protein Lhx1 [Rattus norvegicus]
gi|354477124|ref|XP_003500772.1| PREDICTED: LIM/homeobox protein Lhx1-like [Cricetulus griseus]
gi|51702761|sp|P63007.1|LHX1_RAT RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1; Short=Rlim
gi|51702763|sp|P63006.1|LHX1_MOUSE RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1
gi|51702764|sp|P63008.1|LHX1_MESAU RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein LMX-2; AltName:
Full=Homeobox protein Lim-1
gi|2144068|pir||I58187 homeotic protein lim-1 - rat
gi|425217|emb|CAA81797.1| lim1 [Mus musculus]
gi|559636|gb|AAC60696.1| transcription factor [Rattus sp.]
gi|587463|emb|CAA57164.1| lmx2 [Mesocricetus auratus]
gi|4104801|gb|AAD02169.1| homeobox protein Lim1 [Mus musculus]
gi|62201098|gb|AAH92374.1| Lhx1 protein [Mus musculus]
gi|148683791|gb|EDL15738.1| LIM homeobox protein 1 [Mus musculus]
gi|149053699|gb|EDM05516.1| LIM homeobox protein 1 [Rattus norvegicus]
Length = 406
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 EKEVEM-----LQGYAQGIPFDLIT------------------------SSKSHDGRRGP 92
+ L G L S+++ D G
Sbjct: 119 LSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>gi|431890885|gb|ELK01764.1| LIM/homeobox protein Lhx1 [Pteropus alecto]
Length = 406
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 EKEVEM-----LQGYAQGIPFDLIT------------------------SSKSHDGRRGP 92
+ L G L S+++ D G
Sbjct: 119 LSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>gi|55846812|gb|AAV67410.1| LIM homeobox protein 1 [Macaca fascicularis]
Length = 403
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 56 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 115
Query: 62 EKEVEM-----LQGYAQGIPFDLIT------------------------SSKSHDGRRGP 92
+ L G L S+++ D G
Sbjct: 116 LSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGA 175
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 176 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 222
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 1 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 57
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 58 TKCAGCAQGISPSDLVRRARS 78
>gi|167859587|gb|ACA04748.1| Lim3 [Amphimedon queenslandica]
Length = 338
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 21/133 (15%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
+C GC + + P ++V + +NV+H+QCF C +C +L G++F ++ +L C+ DYE
Sbjct: 151 RCAGCQQPIPPTQVVRRAQENVYHLQCFACFICQRQLSTGDEFYLMDDRKLVCKADYE-- 208
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
+ DG + KRPRT ++ +Q K ++ +SPKP R VR+
Sbjct: 209 ----------------AAKARADGSQ--KRPRTTISQKQLDLLKTAYCVSPKPSRHVRQE 250
Query: 125 LARDTGLSVRIVQ 137
L+ TGL +R+VQ
Sbjct: 251 LSDKTGLDMRVVQ 263
>gi|301776020|ref|XP_002923422.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1-like
[Ailuropoda melanoleuca]
Length = 405
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 EKEVEM-----LQGYAQGIPFDLIT------------------------SSKSHDGRRGP 92
+ L G L S+++ D G
Sbjct: 119 LSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>gi|340376253|ref|XP_003386648.1| PREDICTED: LIM/homeobox protein Lhx3-like [Amphimedon
queenslandica]
Length = 338
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 21/133 (15%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
+C GC + + P ++V + +NV+H+QCF C +C +L G++F ++ +L C+ DYE
Sbjct: 151 RCAGCQQPIPPTQVVRRAQENVYHLQCFACFICQRQLSTGDEFYLMDDRKLVCKADYE-- 208
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
+ DG + KRPRT ++ +Q K ++ +SPKP R VR+
Sbjct: 209 ----------------AAKARADGSQ--KRPRTTISQKQLDLLKTAYCVSPKPSRHVRQE 250
Query: 125 LARDTGLSVRIVQ 137
L+ TGL +R+VQ
Sbjct: 251 LSDKTGLDMRVVQ 263
>gi|37789883|gb|AAP04274.1| ScLim1 [Scyliorhinus canicula]
Length = 237
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 31/163 (19%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDYEKE 64
KC GC + + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ D+
Sbjct: 6 KCAGCYQGISPSDLVRRARSKVFHLNCFTCMICNKQLSTGEELYIIDENKFVCKDDFLNS 65
Query: 65 VEMLQGYA----------------------------QGIPFDLITSSKSHDGRRGPKR-- 94
+ A I S+++ + G KR
Sbjct: 66 NNSRENGALSVTACSDQSLSPDSQDHLQDDTKDSESANISDKETASNENEEQNLGAKRRG 125
Query: 95 PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 126 PRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 168
>gi|297662848|ref|XP_002809900.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-alpha [Pongo abelii]
Length = 489
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/57 (75%), Positives = 49/57 (85%), Gaps = 1/57 (1%)
Query: 81 TSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
T+ + D +R PKRPRTILTTQQRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 292 TAEEGKDHKR-PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 347
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ G++FV+K+ R DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQXGDEFVLKRAAALQR-DY 147
Query: 62 EKEVEML 68
EKE E+L
Sbjct: 148 EKERELL 154
>gi|426247330|ref|XP_004017439.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5 [Ovis
aries]
Length = 386
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 15/150 (10%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQGYAQGIP--FDLITSSKSHDG-RRGPKRPRTILTTQQRRA-----------F 107
+ +G + D S D + PK ++ + A
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNLETL 179
Query: 108 KASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 KAAFAATPKPTRHIREQLAQETGLNMRVIQ 209
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C GC E+ D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDFFRRFG 61
Query: 67 M-LQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>gi|410903918|ref|XP_003965440.1| PREDICTED: LIM/homeobox protein Lhx5-like [Takifugu rubripes]
Length = 396
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 83/166 (50%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC + + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ D+
Sbjct: 60 FGTKCAGCLQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKEDF 119
Query: 62 -----EKEVEM--------------LQGYAQGI--PFDLITSS-------KSHDGRRGPK 93
KE + LQ Q D TSS ++ + G K
Sbjct: 120 LSSGATKEANLNSVSSCTDRSLSPDLQDPTQDDIKETDNSTSSDKETNNIENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|47228451|emb|CAG05271.1| unnamed protein product [Tetraodon nigroviridis]
Length = 579
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC + + P++LV K VFH+ CF C+VC +L GE+ +VI + + C+ D+
Sbjct: 219 FGTKCAGCLQGISPNDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKEDF 278
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ + + D TSS ++ + G K
Sbjct: 279 LSSGAIKEANLNSVSSCTDRSLSPDLQDPTQDDIKETDNSTSSDKETNNIENEEQNSGTK 338
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 339 RRGPRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQ 384
>gi|18858977|ref|NP_571293.1| LIM/homeobox protein Lhx5 [Danio rerio]
gi|1708830|sp|P52889.1|LHX5_DANRE RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5; AltName: Full=Homeobox protein LIM-5
gi|840664|gb|AAA99465.1| LIM class homeodomain protein [Danio rerio]
gi|68534671|gb|AAH98523.1| LIM homeobox 5 [Danio rerio]
Length = 399
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 37/169 (21%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC + + P +LV + VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCLQGISPSDLVRRARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKEDY 119
Query: 62 E-----KEVEML-------QGYAQGIPFDLITSSKSHDG--------------------- 88
KEV + + + +P + +K D
Sbjct: 120 LSASAIKEVNLNSVSSCTDRSLSPDLPDQIQDDTKETDNSTSSDKDTNNNENEEQNSCTK 179
Query: 89 RRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRG PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRG---PRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|431898835|gb|ELK07205.1| LIM homeobox transcription factor 1-beta, partial [Pteropus alecto]
Length = 291
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 50/67 (74%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 64 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 123
Query: 62 EKEVEML 68
EKE ++L
Sbjct: 124 EKEKDLL 130
>gi|432095417|gb|ELK26616.1| LIM homeobox transcription factor 1-beta [Myotis davidii]
Length = 227
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 47/53 (88%), Gaps = 2/53 (3%)
Query: 87 DGR--RGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
DG+ R PKRPRTILTTQQRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 53 DGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 105
>gi|345324971|ref|XP_001508423.2| PREDICTED: hypothetical protein LOC100077160 [Ornithorhynchus
anatinus]
Length = 352
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 60/104 (57%), Gaps = 19/104 (18%)
Query: 34 VCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPK 93
+C +CG R D E + G +G + + D +R PK
Sbjct: 84 ICAICGDRASGKSD------------DEEARSKPGPGAGKG------SGEEGKDHKR-PK 124
Query: 94 RPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RPRTILTTQQRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 125 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 168
>gi|410930167|ref|XP_003978470.1| PREDICTED: LIM/homeobox protein Lhx1-like [Takifugu rubripes]
Length = 408
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 33/168 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC + + P++LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCGGCFQGISPNDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 -----EKEVEMLQGYAQGIPF-----------DLI--------------TSSKSHDGRRG 91
K+ +L P D++ ++++ D G
Sbjct: 119 LSNSNGKDTNLLSVTTCSDPSLSPDSQDQLQDDVVLKDTEIAALSDKETVNNENDDQNLG 178
Query: 92 PKR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 GKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 226
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGC-ERPILDRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGRLYCKNDFFRRFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G QGI P DL+ ++S
Sbjct: 61 TKCGGCFQGISPNDLVRRARS 81
>gi|47224946|emb|CAG06516.1| unnamed protein product [Tetraodon nigroviridis]
Length = 408
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 33/168 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC + + P++LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCGGCFQGISPNDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 ------------------------------EKEVEMLQGYAQGIPFDLITSSKSHDGRRG 91
+ +V + + ++++ D G
Sbjct: 119 LSNSNVKDTNLLSVTTCSDPSLSPDSQDQLQDDVVLKDTEIAALSDKETVNNENDDQNLG 178
Query: 92 PKR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 GKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 226
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGC-ERPILDRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGRLYCKNDFFRRFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G QGI P DL+ ++S
Sbjct: 61 TKCGGCFQGISPNDLVRRARS 81
>gi|291408327|ref|XP_002720473.1| PREDICTED: LIM homeobox transcription factor 1, beta [Oryctolagus
cuniculus]
Length = 115
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 51/71 (71%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 37 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 96
Query: 62 EKEVEMLQGYA 72
EKE ++L +
Sbjct: 97 EKEKDLLSSVS 107
>gi|268567057|ref|XP_002639879.1| C. briggsae CBR-LIN-11 protein [Caenorhabditis briggsae]
Length = 411
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 28/163 (17%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C GC KL ++LV + D VFH++CF C VC L G+Q I +G C+ D++
Sbjct: 130 YGHRCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIMEGNRMCQNDFQ 189
Query: 63 KEVE------MLQGYAQG------IPFDLITS---------------SKSHDGRRGPKR- 94
+ M + + G I D + + S D +R
Sbjct: 190 TATKTSTPTSMHRPISNGSECNSDIEEDNVDACDEGGLDDVDGDCGKDNSDDSNSAKRRG 249
Query: 95 PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PRT + +Q K +F +PKP R +RE LA +TGL++R++Q
Sbjct: 250 PRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQ 292
>gi|449282069|gb|EMC88978.1| LIM/homeobox protein Lhx1 [Columba livia]
Length = 400
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 32/161 (19%)
Query: 9 GCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY------ 61
GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 GCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLNNSNT 118
Query: 62 EKEVEMLQGYAQGIP----------------------FDLITSSKSHDGRR-GPKR--PR 96
KE + P D T S +D + G KR PR
Sbjct: 119 AKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKETGSNENDDQNLGAKRRGPR 178
Query: 97 TILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
T + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 TTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 219
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFR--- 57
Query: 67 MLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 58 --AGCAQGISPSDLVRRARS 75
>gi|444730606|gb|ELW70984.1| LIM homeobox transcription factor 1-alpha [Tupaia chinensis]
Length = 265
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEML 68
EKE E+L
Sbjct: 149 EKERELL 155
>gi|118343866|ref|NP_001071756.1| transcription factor protein [Ciona intestinalis]
gi|70570111|dbj|BAE06538.1| transcription factor protein [Ciona intestinalis]
Length = 625
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 46/53 (86%), Gaps = 1/53 (1%)
Query: 85 SHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
S DG+R KRPRTIL QRRAFKA+FE++PKPCRKVRE LA+DTGL+VR+VQ
Sbjct: 386 SKDGKRS-KRPRTILNAVQRRAFKAAFEVTPKPCRKVRETLAKDTGLTVRVVQ 437
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 5 KKCLGCSEKLGPDELVMK--TLDNVFHVQCFVCVVCGSRLQRGEQFVIK 51
KKC GC K+ +ELVM+ T V+HV CF CV C L++G++FV+
Sbjct: 222 KKCSGCGSKIESEELVMRVATSGYVYHVGCFACVTCKRLLRKGDEFVMN 270
>gi|549846|gb|AAA21644.1| LIM domain transcription factor LIM-1 [Homo sapiens]
Length = 404
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC + + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCRQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 ------EKEVEMLQGYAQGIPF-----------------------DLITSSKSHDGRRGP 92
KE + P S+++ D G
Sbjct: 119 LSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEAGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR P T + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPGTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 67 M-LQGYAQGI-PFDLITSSKS 85
G QGI P DL+ ++S
Sbjct: 61 TKCAGCRQGISPSDLVRRARS 81
>gi|157137279|ref|XP_001663969.1| arrowhead [Aedes aegypti]
gi|108869747|gb|EAT33972.1| AAEL013765-PA [Aedes aegypti]
Length = 201
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 64/135 (47%), Gaps = 7/135 (5%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC CS + P + V K D VFH+ CF C CG +L GEQF + ++ C+ Y
Sbjct: 9 FGAKCSKCSRTIAPSDWVRKARDLVFHLACFSCDTCGRQLSTGEQFALIDDKVMCKIHYM 68
Query: 63 KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
+ G D +KS KR RT T +Q +A+F+I P +
Sbjct: 69 DNADDSNSSDDGCSTDGFNKNKS-------KRVRTTFTEEQLHILQANFQIDSNPDGQDL 121
Query: 123 EGLARDTGLSVRIVQ 137
E +A+ TGLS R+ Q
Sbjct: 122 ERIAQLTGLSKRVTQ 136
>gi|157128769|ref|XP_001661512.1| arrowhead [Aedes aegypti]
gi|108872464|gb|EAT36689.1| AAEL011247-PA [Aedes aegypti]
Length = 271
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 7/132 (5%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC CS + P + V K D VFH+ CF C CG +L GEQF + ++ C+ Y
Sbjct: 82 KCSKCSRTIAPSDWVRKARDLVFHLACFSCDTCGRQLSTGEQFALIDDKVMCKIHYMDNA 141
Query: 66 EMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGL 125
+ G D +KS KR RT T +Q +A+F+I P + E +
Sbjct: 142 DDSNSSDDGCSTDGFNKNKS-------KRVRTTFTEEQLHILQANFQIDSNPDGQDLERI 194
Query: 126 ARDTGLSVRIVQ 137
A+ TGLS R+ Q
Sbjct: 195 AQLTGLSKRVTQ 206
>gi|432899669|ref|XP_004076609.1| PREDICTED: LIM/homeobox protein Lhx1-like [Oryzias latipes]
Length = 402
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 29/164 (17%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GCS+ + P +LV + VFH+ CF CV+C +L GE+ +++ + + C+ DY
Sbjct: 59 FGTKCGGCSQGILPSDLVRRAKSKVFHLNCFTCVMCNKQLSTGEELYILDEFKFVCKEDY 118
Query: 62 E----KEVEMLQGYAQGIPF-----------------------DLITSSKSHDGRRGPKR 94
+ K+ +L P D + G +R
Sbjct: 119 QNSNGKDTILLSVTTCSEPSLSPDSQDPQDDGKDSESGHLSDKDACGNDNDEQSAVGKRR 178
Query: 95 -PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PRT + +Q KA+F +PKP R +RE L+R+TGL++R++Q
Sbjct: 179 GPRTTIKAKQLETLKAAFAATPKPTRHIREQLSRETGLNMRVIQ 222
>gi|258504101|gb|ACV72756.1| LIN-11 [Caenorhabditis remanei]
gi|258504105|gb|ACV72758.1| LIN-11 [Caenorhabditis remanei]
Length = 383
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 29/164 (17%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLF-CRPDY 61
Y +C GC KL ++LV + D VFH++CF C VC L G+Q I +G F C+ D+
Sbjct: 118 YGHRCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIMEGNRFMCQNDF 177
Query: 62 EKEVEMLQGYAQGIPF------------DLITS---------------SKSHDGRRGPKR 94
+ + + P D + + S D +R
Sbjct: 178 QTATKTSTPTSMHRPISNGSECNSDMEEDAVDACDDVGLDDGEGDCGKDNSDDSNSAKRR 237
Query: 95 -PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PRT + +Q K +F +PKP R +RE LA +TGL++R++Q
Sbjct: 238 GPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQ 281
>gi|258504089|gb|ACV72750.1| LIN-11 [Caenorhabditis remanei]
gi|258504091|gb|ACV72751.1| LIN-11 [Caenorhabditis remanei]
gi|258504093|gb|ACV72752.1| LIN-11 [Caenorhabditis remanei]
gi|258504099|gb|ACV72755.1| LIN-11 [Caenorhabditis remanei]
gi|258504113|gb|ACV72762.1| LIN-11 [Caenorhabditis remanei]
gi|258504115|gb|ACV72763.1| LIN-11 [Caenorhabditis remanei]
Length = 383
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 29/164 (17%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLF-CRPDY 61
Y +C GC KL ++LV + D VFH++CF C VC L G+Q I +G F C+ D+
Sbjct: 118 YGHRCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIMEGNRFMCQNDF 177
Query: 62 EKEVEMLQGYAQGIPF------------DLITS---------------SKSHDGRRGPKR 94
+ + + P D + + S D +R
Sbjct: 178 QTATKTSTPTSMHRPISNGSECNSDMEEDAVDACDDVGLDDGEGDCGKDNSDDSNSAKRR 237
Query: 95 -PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PRT + +Q K +F +PKP R +RE LA +TGL++R++Q
Sbjct: 238 GPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQ 281
>gi|258504095|gb|ACV72753.1| LIN-11 [Caenorhabditis remanei]
gi|258504097|gb|ACV72754.1| LIN-11 [Caenorhabditis remanei]
gi|258504103|gb|ACV72757.1| LIN-11 [Caenorhabditis remanei]
gi|258504107|gb|ACV72759.1| LIN-11 [Caenorhabditis remanei]
gi|258504109|gb|ACV72760.1| LIN-11 [Caenorhabditis remanei]
gi|258504111|gb|ACV72761.1| LIN-11 [Caenorhabditis remanei]
gi|258504117|gb|ACV72764.1| LIN-11 [Caenorhabditis remanei]
gi|258504119|gb|ACV72765.1| LIN-11 [Caenorhabditis remanei]
Length = 383
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 29/164 (17%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLF-CRPDY 61
Y +C GC KL ++LV + D VFH++CF C VC L G+Q I +G F C+ D+
Sbjct: 118 YGHRCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIMEGNRFMCQNDF 177
Query: 62 EKEVEMLQGYAQGIPF------------DLITS---------------SKSHDGRRGPKR 94
+ + + P D + + S D +R
Sbjct: 178 QTATKTSTPTSMHRPISNGSECNSDMEEDAVDACDDVGLDDGEGDCGKDNSDDSNSAKRR 237
Query: 95 -PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PRT + +Q K +F +PKP R +RE LA +TGL++R++Q
Sbjct: 238 GPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQ 281
>gi|308485364|ref|XP_003104881.1| CRE-LIN-11 protein [Caenorhabditis remanei]
gi|308257579|gb|EFP01532.1| CRE-LIN-11 protein [Caenorhabditis remanei]
Length = 415
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 29/164 (17%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLF-CRPDY 61
Y +C GC KL ++LV + D VFH++CF C VC L G+Q I +G F C+ D+
Sbjct: 133 YGHRCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIMEGNRFMCQNDF 192
Query: 62 EKEVEMLQGYAQGIPF------------DLITS---------------SKSHDGRRGPKR 94
+ + + P D + + S D +R
Sbjct: 193 QTATKTSTPTSMHRPISNGSECNSDMEEDAVDACDDVGLDDGEGDCGKDNSDDSNSAKRR 252
Query: 95 -PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PRT + +Q K +F +PKP R +RE LA +TGL++R++Q
Sbjct: 253 GPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQ 296
>gi|195998992|ref|XP_002109364.1| hypothetical protein TRIADDRAFT_20649 [Trichoplax adhaerens]
gi|190587488|gb|EDV27530.1| hypothetical protein TRIADDRAFT_20649 [Trichoplax adhaerens]
Length = 208
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 18/134 (13%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIK-QGQLFCRPDYEK 63
+KC GC+ + PDE+V + + +H+ C +C+VC + + G+++ I +G+ C+ DY+
Sbjct: 69 RKCQGCNLGILPDEMVYRLHGSCYHINCLLCIVCSRQFKVGDKYYISDEGKPICKEDYDV 128
Query: 64 EVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVRE 123
+ Q + + KRPRT +T QQ + + + I P+P R RE
Sbjct: 129 AIMYFQLHHPNL-----------------KRPRTSITQQQLKMLNSVYRIKPRPSRITRE 171
Query: 124 GLARDTGLSVRIVQ 137
+A GL +R+VQ
Sbjct: 172 MIATKVGLDLRVVQ 185
>gi|47219374|emb|CAG01537.1| unnamed protein product [Tetraodon nigroviridis]
Length = 390
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 29/164 (17%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ +++ + + C+ DY
Sbjct: 52 FGTKCDGCAQGILPSDLVRRAKSKVFHLNCFTCMICNKQLSTGEELYILDEFKFVCKEDY 111
Query: 62 E----KEVEMLQGYAQGIPF-----------------------DLITSSKSHDGRRGPKR 94
K+ +L + P D + G G +R
Sbjct: 112 HNCNGKDTILLSVTSCSDPSMSPDSQDPQDDGKDSETGHLSDKDACGNENDEQGAVGKRR 171
Query: 95 -PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PRT + +Q KA+F +PKP R +RE L+++TGL++R++Q
Sbjct: 172 GPRTTIKAKQLETLKAAFAATPKPTRHIREQLSQETGLNMRVIQ 215
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV-EMLQGYAQGI 75
D ++K LD +HV+C C C L E+ ++G+L+C+ D+ + G AQGI
Sbjct: 6 DRFLLKVLDRPWHVKCVHCCECKCTLS--EKCFSREGKLYCKNDFFRRFGTKCDGCAQGI 63
Query: 76 -PFDLITSSKS 85
P DL+ +KS
Sbjct: 64 LPSDLVRRAKS 74
>gi|395845905|ref|XP_003795658.1| PREDICTED: LIM/homeobox protein Lhx1 [Otolemur garnettii]
Length = 407
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 33/168 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 EKEVEM-----LQGYAQGIPFDLIT------------------------SSKSHDGRRGP 92
+ L G L S+++ D G
Sbjct: 119 LSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRA-FKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 226
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>gi|17508255|ref|NP_492696.1| Protein LIN-11 [Caenorhabditis elegans]
gi|2506818|sp|P20154.2|LIN11_CAEEL RecName: Full=Protein lin-11; AltName: Full=Abnormal cell lineage
protein 11
gi|3881427|emb|CAB02310.1| Protein LIN-11 [Caenorhabditis elegans]
Length = 405
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 29/164 (17%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLF-CRPDY 61
Y ++C GC KL ++LV + D VFH++CF C VC L G+Q I +G F C+ D+
Sbjct: 123 YSQRCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIMEGNRFVCQSDF 182
Query: 62 EKEVEMLQGYAQGIPF------------DLITS---------------SKSHDGRRGPKR 94
+ + + P D + + S D +R
Sbjct: 183 QTATKTSTPTSIHRPVSNGSECNSDVEEDNVDACDEVGLDDGEGDCGKDNSDDSNSAKRR 242
Query: 95 -PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PRT + +Q K +F +PKP R +RE LA +TGL++R++Q
Sbjct: 243 GPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQ 286
>gi|829167|emb|CAA38240.1| lin-11 protein [Caenorhabditis elegans]
gi|226840|prf||1608206A lin-11 gene
Length = 382
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 29/164 (17%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLF-CRPDY 61
Y ++C GC KL ++LV + D VFH++CF C VC L G+Q I +G F C+ D+
Sbjct: 100 YSQRCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIMEGNRFVCQSDF 159
Query: 62 EKEVEMLQGYAQGIPF------------DLITS---------------SKSHDGRRGPKR 94
+ + + P D + + S D +R
Sbjct: 160 QTATKTSTPTSIHRPVSNGSECNSDVEEDNVDACDEVGLDDGEGDCGKDNSDDSNSAKRR 219
Query: 95 -PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PRT + +Q K +F +PKP R +RE LA +TGL++R++Q
Sbjct: 220 GPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQ 263
>gi|410915338|ref|XP_003971144.1| PREDICTED: LIM/homeobox protein Lhx1-like [Takifugu rubripes]
Length = 397
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 29/164 (17%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ +V+ + + C+ DY
Sbjct: 59 FGTKCDGCAQGILPSDLVRRAKSKVFHLNCFTCMMCNKQLSTGEELYVLDEFKFVCKEDY 118
Query: 62 E----KEVEMLQGYAQGIPF-----------------------DLITSSKSHDGRRGPKR 94
K+ +L + P D + G G +R
Sbjct: 119 HNSSGKDTILLSVTSCSDPSMSPDSQDPQDDGKDSETGHLSDKDACGNENDEQGAVGKRR 178
Query: 95 -PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PRT + +Q KA+F +PKP R +RE L+++TGL++R++Q
Sbjct: 179 GPRTTIKAKQLETLKAAFAATPKPTRHIREQLSQETGLNMRVIQ 222
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
+C C EK D ++K LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 3 QCTSC-EKPILDRFLLKVLDRPWHVKCVQCCDCKCTLS--EKCFSREGKLYCKNDFFRRF 59
Query: 66 -EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ +KS
Sbjct: 60 GTKCDGCAQGILPSDLVRRAKS 81
>gi|426238599|ref|XP_004013238.1| PREDICTED: LIM/homeobox protein Lhx1 [Ovis aries]
Length = 388
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 32/161 (19%)
Query: 9 GCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDYEKEVEM 67
GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY +
Sbjct: 65 GCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLSNSSV 124
Query: 68 -----LQGYAQGIPFDLIT------------------------SSKSHDGRRGPKR--PR 96
L G L S+++ D G KR PR
Sbjct: 125 AKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGAKRRGPR 184
Query: 97 TILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
T + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 185 TTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRRFG 60
Query: 67 M-LQGYAQGI-PFDLITSSKS 85
+ + G AQGI P DL+ ++S
Sbjct: 61 LCVSGCAQGISPSDLVRRARS 81
>gi|209489337|gb|ACI49110.1| hypothetical protein Cbre_JD13.012 [Caenorhabditis brenneri]
Length = 369
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 29/164 (17%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLF-CRPDY 61
Y +C GC KL ++LV + D VFH++CF C VC L G+Q I +G F C+ D+
Sbjct: 87 YGHRCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIMEGNRFMCQNDF 146
Query: 62 EKEVEMLQGYAQGIPF------------DLITS---------------SKSHDGRRGPKR 94
+ + + P D + + S D +R
Sbjct: 147 QTATKTSTPTSMHRPVSNGSECNSDMEEDNVDACDDVGLDDVDGDCGKDNSDDSNSAKRR 206
Query: 95 -PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PRT + +Q K +F +PKP R +RE LA +TGL++R++Q
Sbjct: 207 GPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQ 250
>gi|341889206|gb|EGT45141.1| CBN-LIN-11 protein [Caenorhabditis brenneri]
Length = 372
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 29/164 (17%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLF-CRPDY 61
Y +C GC KL ++LV + D VFH++CF C VC L G+Q I +G F C+ D+
Sbjct: 130 YGHRCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIMEGNRFMCQNDF 189
Query: 62 ---------------------------EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKR 94
E V+ S D +R
Sbjct: 190 QTATKTSTPTSMHRPVSNGSECNSDMEEDNVDACDDVGLDDVDGDCGKDNSDDSNSAKRR 249
Query: 95 -PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PRT + +Q K +F +PKP R +RE LA +TGL++R++Q
Sbjct: 250 GPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQ 293
>gi|170034026|ref|XP_001844876.1| LIM/homeobox protein Awh [Culex quinquefasciatus]
gi|167875284|gb|EDS38667.1| LIM/homeobox protein Awh [Culex quinquefasciatus]
Length = 198
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ + KC CS + P + V K D VFH+ CF C CG +L GEQF + ++ C+
Sbjct: 2 LTFGAKCSKCSRSIAPSDWVRKARDLVFHLACFSCDTCGRQLSTGEQFALIDDKVMCKIH 61
Query: 61 YEKE-VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
Y+ E G D +KS KR RT T +Q +A+F+I P
Sbjct: 62 YQDTGDEASNSSDDGCSTDGFNKNKS-------KRVRTTFTEEQLHILQANFQIDSNPDG 114
Query: 120 KVREGLARDTGLSVRIVQ 137
+ E +A+ TGLS R+ Q
Sbjct: 115 QDLERIAQLTGLSKRVTQ 132
>gi|110339247|gb|ABG67887.1| LMX, partial [Nematostella vectensis]
Length = 60
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 43/46 (93%)
Query: 92 PKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PKRPRTILT+QQR+ FK++FEIS KPCRKVRE L+R+TGLSVR+VQ
Sbjct: 1 PKRPRTILTSQQRKVFKSAFEISSKPCRKVREELSRETGLSVRVVQ 46
>gi|441636332|ref|XP_003259172.2| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx4 [Nomascus
leucogenys]
Length = 415
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 35/135 (25%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C + + P ++V K D V+H+ CF C++C +L G++F
Sbjct: 129 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYXX----------- 177
Query: 63 KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
D G KRPRT +T +Q K +++ SPKP R VR
Sbjct: 178 ------------------------DSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVR 213
Query: 123 EGLARDTGLSVRIVQ 137
E L+ +TGL +R+VQ
Sbjct: 214 EQLSSETGLDMRVVQ 228
>gi|170034028|ref|XP_001844877.1| arrowhead [Culex quinquefasciatus]
gi|167875285|gb|EDS38668.1| arrowhead [Culex quinquefasciatus]
Length = 213
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC CS + P + V K D VFH+ CF C CG +L GEQF + ++ C+ Y+
Sbjct: 21 FGAKCSKCSRSIAPSDWVRKARDLVFHLACFSCDTCGRQLSTGEQFALIDDKVMCKIHYQ 80
Query: 63 KE-VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E G D +KS KR RT T +Q +A+F+I P +
Sbjct: 81 DTGDEASNSSDDGCSTDGFNKNKS-------KRVRTTFTEEQLHILQANFQIDSNPDGQD 133
Query: 122 REGLARDTGLSVRIVQ 137
E +A+ TGLS R+ Q
Sbjct: 134 LERIAQLTGLSKRVTQ 149
>gi|339252326|ref|XP_003371386.1| LIM/homeobox protein Lhx1 [Trichinella spiralis]
gi|316968365|gb|EFV52646.1| LIM/homeobox protein Lhx1 [Trichinella spiralis]
Length = 309
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 79/182 (43%), Gaps = 47/182 (25%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC CS+ +LV + FH+ CF C +C RL G+Q ++I C+ DY
Sbjct: 67 YGAKCSRCSQNFSRGDLVRYARNKAFHIDCFCCTICQKRLNTGDQLYIINDSTFVCKTDY 126
Query: 62 EK----------EVEML-----QGYAQGIP---------------------------FDL 79
K E ++L Q +A P DL
Sbjct: 127 MKTSHAQKAILEEQDVLSPADEQHFASSSPDSCCSQEQAKLSKNDDSINGISNGSNGADL 186
Query: 80 ITSSKSHDG--RRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRI 135
++ + G G KR PRT + +Q KA+F +PKP R +RE LA++TGL++R+
Sbjct: 187 AATTGTSVGTSSNGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRV 246
Query: 136 VQ 137
+Q
Sbjct: 247 IQ 248
>gi|330858350|gb|AEC46867.1| LIM homeobox 1 protein [Coturnix japonica]
Length = 151
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 32/143 (22%)
Query: 27 VFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY------EKEVEMLQGYAQGIPF-- 77
VFH+ CF C++C RL GE+ ++I + + C+ DY KE + P
Sbjct: 3 VFHLNCFTCMMCNKRLSTGEELYIIDENKFVCKEDYLNNSNTAKENSLHSATTGSDPSLS 62
Query: 78 --------------------DLITSSKSHDGRR-GPKR--PRTILTTQQRRAFKASFEIS 114
D T S +D + G KR PRT + +Q KA+F +
Sbjct: 63 PDSQDPSQDDAKDSESANVSDKETGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAAT 122
Query: 115 PKPCRKVREGLARDTGLSVRIVQ 137
PKP R +RE LA++TGL++R++Q
Sbjct: 123 PKPARHIREQLAQETGLNMRVIQ 145
>gi|170586966|ref|XP_001898250.1| LIM homeobox transcription factor 1 alpha [Brugia malayi]
gi|158594645|gb|EDP33229.1| LIM homeobox transcription factor 1 alpha, putative [Brugia malayi]
Length = 177
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 42/50 (84%)
Query: 88 GRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R+ PKRPRTIL TQQR+AFK +FE + KPCRKVRE LA++T LSVR+VQ
Sbjct: 40 NRKTPKRPRTILNTQQRKAFKLAFEKTSKPCRKVREQLAKETNLSVRVVQ 89
>gi|156390719|ref|XP_001635417.1| predicted protein [Nematostella vectensis]
gi|156222511|gb|EDO43354.1| predicted protein [Nematostella vectensis]
Length = 253
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 76/161 (47%), Gaps = 29/161 (18%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
VKKC CS+ + ELVM+ D V+HV CF C C L GE F ++ +++C+ DYE+
Sbjct: 68 VKKCSSCSQAISSKELVMRARDQVYHVNCFACDRCKRMLATGEYFGMRGIRIYCKEDYEE 127
Query: 64 EVE-------MLQGYAQGIP----------------FDLITS----SKSHDGRRGPKRPR 96
+ + ++G P +DL + DGR PKR R
Sbjct: 128 LLREESRNPTKINSLSKGRPRKRRIATAIESITNLGYDLSDRPGELTTGADGR--PKRVR 185
Query: 97 TILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
T Q RA K F ++ P K + L++ TGL+ R++Q
Sbjct: 186 TSFKHHQLRAMKTYFAMNHNPDAKDLKQLSQKTGLTKRVLQ 226
>gi|397492168|ref|XP_003817000.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Pan paniscus]
Length = 390
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 26/141 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 75 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 134
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRP-----RTILTTQQRRAFKASFEISPK 116
E ++K RG +RP +T +Q K+++ SPK
Sbjct: 135 E-------------------TAKQRGQPRG-RRPXXXXXXXXITAKQLETLKSAYNTSPK 174
Query: 117 PCRKVREGLARDTGLSVRIVQ 137
P R VRE L+ +TGL +R+VQ
Sbjct: 175 PARHVREQLSSETGLDMRVVQ 195
>gi|397492166|ref|XP_003816999.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Pan paniscus]
Length = 401
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 26/141 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 86 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 145
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRP-----RTILTTQQRRAFKASFEISPK 116
E ++K RG +RP +T +Q K+++ SPK
Sbjct: 146 E-------------------TAKQRGQPRG-RRPXXXXXXXXITAKQLETLKSAYNTSPK 185
Query: 117 PCRKVREGLARDTGLSVRIVQ 137
P R VRE L+ +TGL +R+VQ
Sbjct: 186 PARHVREQLSSETGLDMRVVQ 206
>gi|397492170|ref|XP_003817001.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 3 [Pan paniscus]
Length = 377
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 26/141 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 62 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 121
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRP-----RTILTTQQRRAFKASFEISPK 116
E ++K RG +RP +T +Q K+++ SPK
Sbjct: 122 E-------------------TAKQRGQPRG-RRPXXXXXXXXITAKQLETLKSAYNTSPK 161
Query: 117 PCRKVREGLARDTGLSVRIVQ 137
P R VRE L+ +TGL +R+VQ
Sbjct: 162 PARHVREQLSSETGLDMRVVQ 182
>gi|56694840|gb|AAW23082.1| Islet [Oikopleura dioica]
Length = 381
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 10/138 (7%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY++ C C L P +LV K + FHV CF C C L G++F++ + +LFCRP +
Sbjct: 101 LYMEHCAKCDHALQPTDLVHKVKNCTFHVDCFSCSSCVRVLVSGDEFLLIETRLFCRPCH 160
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPK--RPRTILTTQQRRAFKASFEISPKPCR 119
E E E ++ F + + R PK R RT+L +Q + ++ +P+P
Sbjct: 161 ELESEQ----SRQNQF----RCREMERRNKPKTTRVRTVLNEKQLHTLRTCYQANPRPDA 212
Query: 120 KVREGLARDTGLSVRIVQ 137
++E L TGLS R+++
Sbjct: 213 LMKEQLVEMTGLSPRVIR 230
>gi|395501088|ref|XP_003754930.1| PREDICTED: insulin gene enhancer protein ISL-2 [Sarcophilus
harrisii]
Length = 335
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ +NV+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 59 LFGIKCAKCKVGFSSSDLVMRARENVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 118
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSH------DGRRGPKRP------------RTILTTQQ 103
++ + P L +S H GR+ RP RT+L +Q
Sbjct: 119 SLLLDRASAESPRSPGHLASSRSLHLSAEPGSGRQPSLRPHVHKQTEKTTRVRTVLNEKQ 178
Query: 104 RRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
+ + +P+P ++E L TGLS R++
Sbjct: 179 LHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 211
>gi|156398319|ref|XP_001638136.1| predicted protein [Nematostella vectensis]
gi|156225254|gb|EDO46073.1| predicted protein [Nematostella vectensis]
Length = 329
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 18/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC CS ++ VM+ + ++H+ CF CV C +L G++F +++ LFC+ D+
Sbjct: 74 LFGTKCAKCSLNFSKNDFVMRARNKIYHIDCFRCVACSRQLVPGDEFALREDGLFCKADH 133
Query: 62 EKEVEMLQGYAQ--------------GIPFDLITSSKSHDGRRGPKRP---RTILTTQQR 104
E VE AQ G + T+ S +R RP RT+L +Q
Sbjct: 134 EI-VEKATATAQATHVRNNGQRSSQSGGQTNGQTTPDSTPSKRKTDRPTRVRTVLNEKQL 192
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 193 HTLRTCYNANPRPDAMMKEQLVEMTGLSPRVIR 225
>gi|432852914|ref|XP_004067448.1| PREDICTED: insulin gene enhancer protein ISL-3-like [Oryzias
latipes]
Length = 284
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 18/154 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C+ +LVM+ DNV+H++CF C +C +L G++F +++G L CR D+
Sbjct: 30 LFGIKCAKCNLGFSSSDLVMRARDNVYHIECFRCSMCSRQLLPGDEFSLQEGDLLCRADH 89
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDG------RRGPKRP------------RTILTTQQ 103
+E + P + ++ H R+ P R RT+L +Q
Sbjct: 90 SMLLERTSAGSPISPGHIHSNRPLHMAADPVTVRQAPHRNHVHKQSEKTTRVRTVLNEKQ 149
Query: 104 RRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 150 LHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 183
>gi|1708565|sp|P53409.1|ISL3_ONCTS RecName: Full=Insulin gene enhancer protein ISL-3; Short=Islet-3
Length = 363
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C+ +LVM+ DNV+H++CF C VC +L G++F ++ +L CR D+
Sbjct: 84 LFGIKCAKCNLGFSSSDLVMRARDNVYHIECFRCSVCSRQLLPGDEFSLRDEELLCRADH 143
Query: 62 EKEVEMLQG---------------YAQGIPFDLITSSKSHDGRRGPK--RPRTILTTQQR 104
+E + P + ++H ++ K R RT+L +Q
Sbjct: 144 SLLMERTSAGSPISPGHIHSNRSLHLAAEPVTVRAPHRNHVHKQSEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P +RE L TGLS R+++
Sbjct: 204 HTLRTCYNANPRPDALMREQLVEMTGLSPRVIR 236
>gi|444723048|gb|ELW63713.1| LIM/homeobox protein Lhx5 [Tupaia chinensis]
Length = 610
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 31/156 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 170 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 229
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 230 LSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTK 289
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLAR 127
R PRT + +Q KA+F +PKP R +R LA+
Sbjct: 290 RRGPRTTIKAKQLETLKAAFAATPKPTRHIRAQLAQ 325
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQG 70
+ +G
Sbjct: 120 LSSSSLKEG 128
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>gi|443701940|gb|ELU00130.1| hypothetical protein CAPTEDRAFT_97456 [Capitella teleta]
Length = 269
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 75/170 (44%), Gaps = 36/170 (21%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ +C C L P +LV + LD V+H+QCF C+VC +L GE+ FV+ + C+ DY
Sbjct: 60 FATQCGVCKRDLSPSDLVRRALDRVYHLQCFTCLVCRRQLDTGEEYFVLDTTRFMCKKDY 119
Query: 62 EKEVEMLQGYAQ-----------------GIPFDL---------------ITSSKSHDGR 89
E+E G G P D S DG
Sbjct: 120 -MEIEGKCGKPSGRAPGSCPACGPGTRPPGAPQDSEDDDATTQVSSAEQDAPESNGGDGT 178
Query: 90 RGPK--RPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
G K RPRT++ Q + A+F + P +K RE L TGLS+R++Q
Sbjct: 179 PGSKKSRPRTVIKDDQLKVLHAAFTANHLPTKKEREDLVERTGLSMRVIQ 228
>gi|307195464|gb|EFN77350.1| LIM/homeobox protein Awh [Harpegnathos saltator]
Length = 291
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ + KC C +G + V + + V+H+ CF C C +L GEQF + +L C+
Sbjct: 58 LTFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAH 117
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKS-HDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
Y VE D S+S H G KR RT T +Q +A+F++ P
Sbjct: 118 YLDVVE-----GNNTSSDEGGDSESGHKGGNKAKRVRTTFTEEQLSVLQANFQLDSNPDG 172
Query: 120 KVREGLARDTGLSVRIVQ 137
+ E +A TGLS R+ Q
Sbjct: 173 QDLERIAHVTGLSKRVTQ 190
>gi|322787264|gb|EFZ13400.1| hypothetical protein SINV_02203 [Solenopsis invicta]
Length = 333
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ + KC C +G + V + + V+H+ CF C C +L GEQF + +L C+
Sbjct: 99 LAFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAH 158
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKS-HDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
Y VE D S+S H G KR RT T +Q +A+F++ P
Sbjct: 159 YLDVVE-----GNNTSSDEGGDSESGHKGGNKAKRVRTTFTEEQLSVLQANFQLDSNPDG 213
Query: 120 KVREGLARDTGLSVRIVQ 137
+ E +A TGLS R+ Q
Sbjct: 214 QDLERIAHVTGLSKRVTQ 231
>gi|143347423|gb|ABO93221.1| Islet [Platynereis dumerilii]
Length = 414
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 32/166 (19%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C+E ++ VM+ + ++H+ CF CV C +L G++F ++ LFC+ D+
Sbjct: 79 LFGTKCARCTESFSKNDFVMRARNKIYHIDCFRCVACSRQLIPGDEFALRDDGLFCKSDH 138
Query: 62 EKEVEMLQGYAQGIP----------------------FDLITSSKSHDGRRG-------- 91
E +E Q A P + + H RRG
Sbjct: 139 EV-LERAQNGATPTPENNNNNVNALNNNEKEIKTEKTGSIKSGQAEHGSRRGNSGHKSEH 197
Query: 92 -PKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
P R RT+L +Q + + +P+P ++E L TGLS R++
Sbjct: 198 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLTEMTGLSPRVI 243
>gi|332029130|gb|EGI69141.1| LIM/homeobox protein Awh [Acromyrmex echinatior]
Length = 292
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C +G + V + + V+H+ CF C C +L GEQF + +L C+ Y
Sbjct: 60 FGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAHYL 119
Query: 63 KEVE-MLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
VE A+G S H G KR RT T +Q +A+F++ P +
Sbjct: 120 DVVEGNNNSSAEGGD-----SESGHKGGNKAKRVRTTFTEEQLSVLQANFQLDSNPDGQD 174
Query: 122 REGLARDTGLSVRIVQ 137
E +A TGLS RI Q
Sbjct: 175 LERIAHVTGLSKRITQ 190
>gi|379698940|ref|NP_001243941.1| arrowhead PA [Bombyx mori]
gi|346223348|dbj|BAK78925.1| arrowhead PA [Bombyx mori]
Length = 274
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 6/135 (4%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C + + V K + V+H+ CF C CG +L GEQF + + ++ C+P Y
Sbjct: 65 FGAKCSKCCRGISSSDWVRKAREQVYHLACFACDACGRQLSTGEQFALHEDRVLCKPHY- 123
Query: 63 KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
+E L G + I D S+ + + KR RT T +Q + +A+F++ P +
Sbjct: 124 --LETLDGGS--ISSDDGCDSEGYHKSKA-KRVRTTFTEEQLQVLQANFQLDSNPDGQDL 178
Query: 123 EGLARDTGLSVRIVQ 137
E +A+ TGLS R+ Q
Sbjct: 179 ERIAQVTGLSKRVTQ 193
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+ C C E + D +++ +H C C VC +L R ++ Q++C+ DY K
Sbjct: 6 RTCCACGEPIA-DRFLLEVGGAAWHTGCLRCCVCAVQLDRHPSCFLRDRQVYCKQDYAK 63
>gi|157137277|ref|XP_001663968.1| arrowhead [Aedes aegypti]
gi|108869746|gb|EAT33971.1| AAEL013763-PA, partial [Aedes aegypti]
Length = 211
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 20/144 (13%)
Query: 3 YVKK----CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCR 58
Y+KK C CS + P + V + D VFH+ CF C CG +L GEQF I ++ C+
Sbjct: 66 YIKKFKASCAKCSRSISPSDWVRRARDFVFHLACFACDSCGRQLSTGEQFAIIDDRVLCK 125
Query: 59 PDYEKEVEMLQGYAQGIPFDLITSSKS-----HDGRRGPKRPRTILTTQQRRAFKASFEI 113
Y + ++ D TSS+ + + KR RT T +Q + +A+F+I
Sbjct: 126 THYMELID-----------DGTTSSEDGCDAEGNSKNKTKRIRTTFTEEQIQILQANFQI 174
Query: 114 SPKPCRKVREGLARDTGLSVRIVQ 137
P + E +A TGLS R+ Q
Sbjct: 175 DSNPDGQDLERIALATGLSKRVTQ 198
>gi|158296015|ref|XP_316574.4| AGAP006536-PA [Anopheles gambiae str. PEST]
gi|157016309|gb|EAA11386.5| AGAP006536-PA [Anopheles gambiae str. PEST]
Length = 291
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
++ KC C + + V K D VFH+ CF C CG +L GEQF + ++ C+ Y
Sbjct: 92 MFGAKCSKCCRTIAASDWVRKARDLVFHLACFSCDTCGRQLSTGEQFALIDDKVMCKIHY 151
Query: 62 EKEVEMLQGYA-QGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
VE + G D +KS KR RT T +Q + +A+F+I P +
Sbjct: 152 MDTVEDGSNSSDDGCSSDGYNKNKS-------KRVRTTFTEEQLQVLQANFQIDSNPDGQ 204
Query: 121 VREGLARDTGLSVRIVQ 137
E +A+ TGLS R+ Q
Sbjct: 205 DLERIAQLTGLSKRVTQ 221
>gi|307182931|gb|EFN69941.1| LIM/homeobox protein Awh [Camponotus floridanus]
Length = 258
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C +G + V + + V+H+ CF C C +L GEQF + +L C+ Y V
Sbjct: 29 KCAKCRRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALVDARLLCKAHYLDVV 88
Query: 66 EMLQGYAQGIPFDLITSSKS-HDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
E D S+S H G KR RT T +Q +A+F++ P + E
Sbjct: 89 E-----GNNTSSDEGGDSESGHKGGNKAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLER 143
Query: 125 LARDTGLSVRIVQ 137
+A TGLS R+ Q
Sbjct: 144 IAHVTGLSKRVTQ 156
>gi|345492348|ref|XP_001601137.2| PREDICTED: LIM/homeobox protein Awh-like [Nasonia vitripennis]
Length = 300
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
+C CS +G + V + D V+H+ CF C C +L GEQF + +L C+ Y +
Sbjct: 151 RCAKCSRSIGSGDWVRRARDRVYHLACFACDACSRQLSTGEQFALIDAKLLCKAHY---L 207
Query: 66 EMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGL 125
+ ++G D S S G + KR RT T +Q +A+F++ P + E +
Sbjct: 208 DAVEGNNTSSSED-CDSEHSCKGNK-TKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERI 265
Query: 126 ARDTGLSVRIVQ 137
A TGLS R+ Q
Sbjct: 266 AHVTGLSKRVTQ 277
>gi|170034024|ref|XP_001844875.1| arrowhead [Culex quinquefasciatus]
gi|167875283|gb|EDS38666.1| arrowhead [Culex quinquefasciatus]
Length = 257
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 20/144 (13%)
Query: 3 YVKK----CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCR 58
Y+KK C CS + P + V + D VFH+ CF C C +L GEQF I ++ C+
Sbjct: 61 YIKKYKAACTKCSRSISPSDWVRRARDFVFHLACFSCDTCSRQLSTGEQFAIIDDRVLCK 120
Query: 59 PDYEKEVEMLQGYAQGIPFDLITSSK-----SHDGRRGPKRPRTILTTQQRRAFKASFEI 113
Y + ++ D TSS+ G+ KR RT T +Q + +A+F+I
Sbjct: 121 AHYMELID-----------DGTTSSEDGCDVDGTGKNKTKRIRTTFTEEQIQILQANFQI 169
Query: 114 SPKPCRKVREGLARDTGLSVRIVQ 137
P + E +A TGLS R+ Q
Sbjct: 170 DSNPDGQDLERIALATGLSKRVTQ 193
>gi|47206964|emb|CAF90481.1| unnamed protein product [Tetraodon nigroviridis]
Length = 281
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/45 (80%), Positives = 39/45 (86%)
Query: 93 KRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
K PRTILT QQRR FKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 92 KAPRTILTKQQRRTFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 136
>gi|289541370|gb|ADD09808.1| LIM-homeodomain transcription factor islet protein [Branchiostoma
belcheri]
Length = 250
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC CS ++ VM+ + ++H+ CF CV C +L G++F +++ LFC+ D+
Sbjct: 34 LFGTKCAKCSLGFTKNDFVMRARNKIYHIDCFRCVACSRQLIPGDEFALREDGLFCKTDH 93
Query: 62 E------KEVEMLQGYAQG-IPFDLITSSKSH---DGRR---------GPKRPRTILTTQ 102
E V+ + G ++ T +SH D RR P R RT+L +
Sbjct: 94 EVLERASNNVDSNGRASLGSTDLEMATRPESHGRSDQRRPQVHKQDGHKPTRVRTVLNEK 153
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
Q + + +P+P ++E L TGLS R+++
Sbjct: 154 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 188
>gi|260829945|ref|XP_002609922.1| LIM class homeodomain transcription factor, islet subclass
[Branchiostoma floridae]
gi|229295284|gb|EEN65932.1| LIM class homeodomain transcription factor, islet subclass
[Branchiostoma floridae]
Length = 430
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC CS ++ VM+ + ++H+ CF CV C +L G++F +++ LFC+ D+
Sbjct: 83 LFGTKCAKCSLGFTKNDFVMRARNKIYHIDCFRCVACSRQLIPGDEFALREDGLFCKADH 142
Query: 62 E------KEVEMLQGYAQG-IPFDLITSSKSH-------------DGRRGPKRPRTILTT 101
E V+ + G ++ T +SH DG + P R RT+L
Sbjct: 143 EVLERASNNVDSNGRASLGSTDLEMATRPESHGRSDQRRPQVHKQDGHK-PTRVRTVLNE 201
Query: 102 QQRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
+Q + + +P+P ++E L TGLS R++
Sbjct: 202 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 236
>gi|6980082|gb|AAF34717.1|AF226616_1 LIM-homeodomain transcription factor islet [Branchiostoma floridae]
Length = 419
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC CS ++ VM+ + ++H+ CF CV C +L G++F +++ LFC+ D+
Sbjct: 72 LFGTKCAKCSLGFTKNDFVMRAKNKIYHIDCFRCVACSRQLIPGDEFALREDGLFCKADH 131
Query: 62 E------KEVEMLQGYAQG-IPFDLITSSKSH-------------DGRRGPKRPRTILTT 101
E V+ + G ++ T +SH DG + P R RT+L
Sbjct: 132 EVLERASNNVDSNGRASLGSTDLEMATRPESHGRSDQRRPQVHKQDGHK-PTRVRTVLNE 190
Query: 102 QQRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
+Q + + +P+P ++E L TGLS R++
Sbjct: 191 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 225
>gi|357605400|gb|EHJ64588.1| hypothetical protein KGM_21596 [Danaus plexippus]
Length = 406
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 7/134 (5%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C + + V K + V+H+ CF C CG +L GEQF + + ++ C+P Y +
Sbjct: 198 KCSKCCRGISSSDWVRKAREQVYHLACFACDACGRQLSTGEQFALHEDRVLCKPHY---L 254
Query: 66 EMLQGYAQGIPFDLITSSKSHDG--RRGPKRPRTILTTQQRRAFKASFEISPKPCRKVRE 123
E L G + I D + +G + KR RT T +Q + +A+F++ P + E
Sbjct: 255 ETLDGGS--ISSDGKCNGCDSEGYHKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 312
Query: 124 GLARDTGLSVRIVQ 137
+A+ TGLS R+ Q
Sbjct: 313 RIAQVTGLSKRVTQ 326
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+ C C E + D +++ +H C C VC +L R ++ Q++C+ DY K
Sbjct: 136 RTCCACGEPIA-DRFLLEVGGGAWHTGCLRCCVCAVQLDRHPSCFLRDRQVYCKQDYAK 193
>gi|348500124|ref|XP_003437623.1| PREDICTED: insulin gene enhancer protein ISL-3-like [Oreochromis
niloticus]
Length = 360
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 18/154 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C+ +LVM+ DNV+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 84 LFGIKCAKCNLGFSSSDLVMRARDNVYHIECFRCSVCSRQLLPGDEFSLREEELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDG------RRGPKRP------------RTILTTQQ 103
+E + P + ++ H R+ P R RT+L +Q
Sbjct: 144 SLLLERSSAGSPVSPGHIHSNRPLHLAADPVTVRQAPHRNHVHKQSEKTTRVRTVLNEKQ 203
Query: 104 RRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 204 LHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 237
>gi|322787267|gb|EFZ13403.1| hypothetical protein SINV_03010 [Solenopsis invicta]
Length = 334
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 15/142 (10%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ + KC C +G + V + D V+H+ CF C C +L GEQF + +L C+
Sbjct: 114 LTFGAKCAKCGRSVGAGDWVRRAKDRVYHLACFACDACSRQLSTGEQFALLDARLLCKAH 173
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRG-----PKRPRTILTTQQRRAFKASFEISP 115
Y +++++G + +SS+ D G KR RT T +Q +A+F++
Sbjct: 174 Y---LDVVEG-------NNTSSSEDCDSEHGGKGSKTKRVRTTFTEEQLAVLQANFQMDS 223
Query: 116 KPCRKVREGLARDTGLSVRIVQ 137
P + E +A+ TGLS R+ Q
Sbjct: 224 NPDGQDLERIAQVTGLSKRVTQ 245
>gi|50344739|ref|NP_001002043.1| islet1, like [Danio rerio]
gi|37682137|gb|AAQ97995.1| ISL1 transcription factor, LIM/homeodomain [Danio rerio]
Length = 323
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L KC C + E VM++ N++HVQCF C C L G+++V++ GQL C +
Sbjct: 76 LSTSKCAKCDKAFISKEFVMRSQVNIYHVQCFRCEGCNRPLLSGDEYVLQDGQLLCTDHH 135
Query: 62 EK--EVEMLQGYAQGIPFDLITSSKSHDG--RRGPK--RPRTILTTQQRRAFKASFEISP 115
K + Q G P + I S+ S RR + R RT+L+ Q + + +P
Sbjct: 136 NKLMSASINQQKEAGDPSEEIKSTLSWSSMQRRSERATRVRTVLSETQLCMLQTCYTANP 195
Query: 116 KPCRKVREGLARDTGLSVRIV 136
+P ++E L TGLS R++
Sbjct: 196 RPDALMKEQLVEMTGLSPRVI 216
>gi|1708558|sp|P50212.1|ISL2B_ONCTS RecName: Full=Insulin gene enhancer protein ISL-2B; Short=Islet-2B
gi|64209|emb|CAA46102.1| isl-1 [Oncorhynchus tshawytscha]
gi|1094403|prf||2106150A LIM domain homeobox protein
Length = 340
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C+ +LVM+ DNV+H++CF C VC +L G++F ++ +L CR D+
Sbjct: 66 LFGIKCAKCNIGFCSSDLVMRARDNVYHMECFRCSVCSRQLVPGDEFSLRDEELLCRADH 125
Query: 62 EKEVEMLQGYAQGIPFDLITSS--------------KSHDGRRGPK--RPRTILTTQQRR 105
+E + P ++++ S ++H ++ K R RT+L +Q
Sbjct: 126 GLLLERASAGSPISPGNILSRSFHIADPVSVRQPPHRNHVHKQSEKTTRVRTVLNEKQLH 185
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 186 TLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 217
>gi|126272190|ref|XP_001362509.1| PREDICTED: insulin gene enhancer protein ISL-2 [Monodelphis
domestica]
Length = 359
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ +NV+H++CF C VC +L G++F ++ +L CR D+
Sbjct: 84 LFGIKCAKCKVGFSSSDLVMRARENVYHIECFRCSVCSRQLLPGDEFSLRDHELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGP-----------------KRPRTILTTQQR 104
++ G + P L +S H G R RT+L +Q
Sbjct: 144 SLLLDRASGESPRSPGHLPSSRGLHLSEPGSGRQPSLRAHVHKQAEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
+ + +P+P ++E L TGLS R++
Sbjct: 204 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 235
>gi|380013153|ref|XP_003690632.1| PREDICTED: LIM/homeobox protein Awh-like [Apis florea]
Length = 332
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 6/138 (4%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ + KC C +G + V + + V+H+ CF C C +L GEQF + +L C+
Sbjct: 97 LTFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAH 156
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKS-HDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
Y VE D S+S H KR RT T +Q +A+F++ P
Sbjct: 157 YLDVVE-----GNNTSSDEGGDSESGHKSGNKAKRVRTTFTEEQLSVLQANFQLDSNPDG 211
Query: 120 KVREGLARDTGLSVRIVQ 137
+ E +A TGLS R+ Q
Sbjct: 212 QDLERIAHVTGLSKRVTQ 229
>gi|328708271|ref|XP_001949712.2| PREDICTED: LIM/homeobox protein Awh-like [Acyrthosiphon pisum]
Length = 346
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C CS+ + V K D+V+H+ CF C C +L GE+F + +G++ C+P Y ++
Sbjct: 122 CSKCSKGISASHWVRKARDHVYHLACFRCDACDRQLNTGEEFALHEGRVLCKPHY---LD 178
Query: 67 MLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLA 126
++ G S+S+ + KR RT T +Q + +A+F++ P + E +A
Sbjct: 179 IVDGGT--TSSSEGGDSESYHSKNKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 236
Query: 127 RDTGLSVRIVQ 137
+ TGLS R+ Q
Sbjct: 237 QITGLSKRVTQ 247
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 3 YVK----KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCR 58
YVK +C GCS+ + D ++K D ++HV C C VC L+ IK ++CR
Sbjct: 53 YVKTESLQCRGCSDPI-TDRFLLKVSDKIWHVSCLRCCVCNLVLEDEPSCFIKDDSIYCR 111
Query: 59 PDYEK 63
DY +
Sbjct: 112 QDYAR 116
>gi|291410745|ref|XP_002721643.1| PREDICTED: ISL LIM homeobox 2 [Oryctolagus cuniculus]
Length = 359
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C G +LVM+ D+V+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 84 LFGIKCAKCQVGFGSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGP-----------------KRPRTILTTQQR 104
+E + P L + H GP R RT+L +Q
Sbjct: 144 GLLLERAAAGSPRSPGPLPGARGLHLPDPGPGRQPTLRPHVHKQAEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 204 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 236
>gi|383857877|ref|XP_003704430.1| PREDICTED: LIM/homeobox protein Awh-like [Megachile rotundata]
Length = 371
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 6/138 (4%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ + KC C +G + V + + V+H+ CF C C +L GEQF + +L C+
Sbjct: 137 LTFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAH 196
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKS-HDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
Y VE D S+S H KR RT T +Q +A+F++ P
Sbjct: 197 YLDVVE-----GNNTSSDEGGDSESGHKSGNKAKRVRTTFTEEQLSVLQANFQLDSNPDG 251
Query: 120 KVREGLARDTGLSVRIVQ 137
+ E +A TGLS R+ Q
Sbjct: 252 QDLERIAHVTGLSKRVTQ 269
>gi|91078266|ref|XP_971202.1| PREDICTED: similar to GA10520-PA [Tribolium castaneum]
Length = 343
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 20/139 (14%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC CS + + V K D+V+H+ CF C C +L GE+F + + ++ C+ Y +
Sbjct: 143 KCSVCSRGISSSDWVRKARDHVYHLACFACAACHRQLSTGEEFALHEDRVLCKAHY---L 199
Query: 66 EMLQGYAQGIPFDLITSSKSHDG-------RRGPKRPRTILTTQQRRAFKASFEISPKPC 118
E L G ++ S DG + KR RT T +Q + +A+F++ P
Sbjct: 200 ETLDG----------GTTSSDDGCDAEGYHKNKAKRVRTTFTEEQLQVLQANFQLDSNPD 249
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ E +A+ TGLS R+ Q
Sbjct: 250 GQDLERIAQITGLSKRVTQ 268
>gi|328781496|ref|XP_001121365.2| PREDICTED: LIM/homeobox protein Awh-like [Apis mellifera]
Length = 332
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 6/138 (4%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ + KC C +G + V + + V+H+ CF C C +L GEQF + +L C+
Sbjct: 97 LTFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAH 156
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKS-HDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
Y VE D S+S H KR RT T +Q +A+F++ P
Sbjct: 157 YLDVVE-----GNNTSSDEGGDSESGHKSGNKAKRVRTTFTEEQLSVLQANFQLDSNPDG 211
Query: 120 KVREGLARDTGLSVRIVQ 137
+ E +A TGLS R+ Q
Sbjct: 212 QDLERIAHVTGLSKRVTQ 229
>gi|340721611|ref|XP_003399211.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus terrestris]
gi|350404711|ref|XP_003487194.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus impatiens]
Length = 334
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 6/138 (4%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ + KC C +G + V + + V+H+ CF C C +L GEQF + +L C+
Sbjct: 99 LTFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAH 158
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKS-HDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
Y VE D S+S H KR RT T +Q +A+F++ P
Sbjct: 159 YLDVVE-----GNNTSSDEGGDSESGHKSGNKAKRVRTTFTEEQLSVLQANFQLDSNPDG 213
Query: 120 KVREGLARDTGLSVRIVQ 137
+ E +A TGLS R+ Q
Sbjct: 214 QDLERIAHVTGLSKRVTQ 231
>gi|270004863|gb|EFA01311.1| arrowhead [Tribolium castaneum]
Length = 349
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 20/139 (14%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC CS + + V K D+V+H+ CF C C +L GE+F + + ++ C+ Y +
Sbjct: 129 KCSVCSRGISSSDWVRKARDHVYHLACFACAACHRQLSTGEEFALHEDRVLCKAHY---L 185
Query: 66 EMLQGYAQGIPFDLITSSKSHDG-------RRGPKRPRTILTTQQRRAFKASFEISPKPC 118
E L G ++ S DG + KR RT T +Q + +A+F++ P
Sbjct: 186 ETLDG----------GTTSSDDGCDAEGYHKNKAKRVRTTFTEEQLQVLQANFQLDSNPD 235
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ E +A+ TGLS R+ Q
Sbjct: 236 GQDLERIAQITGLSKRVTQ 254
>gi|18858909|ref|NP_571039.1| insulin gene enhancer protein isl-2b [Danio rerio]
gi|1708564|sp|P53407.1|ISL2B_DANRE RecName: Full=Insulin gene enhancer protein isl-2b; Short=Islet-2B;
AltName: Full=Insulin gene enhancer protein isl-3;
Short=Islet-3
gi|1037168|dbj|BAA07485.1| zfIsl-3 [Danio rerio]
gi|55962547|emb|CAI11499.1| islet 3 [Danio rerio]
gi|63100507|gb|AAH95011.1| Islet2b [Danio rerio]
Length = 358
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C+ +LVM+ D+V+H++CF C VC +L G++F ++ +L CR D+
Sbjct: 84 LFGIKCAKCTLGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSVRDEELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLI---------------TSSKSHDGRRGPK--RPRTILTTQQR 104
+E G + P ++ T ++H ++ K R RT+L +Q
Sbjct: 144 GLALERGPGGSPLSPGNIHTRGLHMAADPVSVRQTPHRNHVHKQSEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 204 HTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 236
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C+GC ++ ++ + D +H C CV C L ++ G+ +C+ DY
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCVECNQYLDETCTCFVRDGKTYCKRDY 81
>gi|444725137|gb|ELW65716.1| Insulin enhancer protein ISL-1 [Tupaia chinensis]
Length = 308
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 21/155 (13%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
MLY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D
Sbjct: 29 MLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRAD 88
Query: 61 YEKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTT 101
+ +V G P L +++ R+ RP RT+L
Sbjct: 89 H--DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 146
Query: 102 QQRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
+Q + + +P+P ++E L TGLS R++
Sbjct: 147 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 181
>gi|595301|gb|AAA80275.1| LIM domain homeobox protein, partial [Danio rerio]
Length = 167
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C+ +LVM+ D+V+H++CF C VC +L G++F ++ +L CR D+
Sbjct: 14 LFGIKCAKCTLGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSVRDEELLCRADH 73
Query: 62 EKEVEMLQGYAQGIPFDLITS---------------SKSHDGRRGPK--RPRTILTTQQR 104
+E G + P ++ T ++H ++ K R RT+L +Q
Sbjct: 74 GLALERGPGGSPLSPGNIHTRGLHMAADPVSVRQTPHRNHVHKQSEKTTRVRTVLNEKQL 133
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 134 HTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 166
>gi|402874959|ref|XP_003901290.1| PREDICTED: insulin gene enhancer protein ISL-2 [Papio anubis]
Length = 350
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ D+V+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 75 LFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 134
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSH-----DGRRGPKRP------------RTILTTQQR 104
+E + P L S H GR+ RP RT+L +Q
Sbjct: 135 GLLLERAAAGSPRSPGPLPGSRGLHLPDAGSGRQPALRPHVHKQTEKTTRVRTVLNEKQL 194
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 195 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 227
>gi|443703132|gb|ELU00843.1| hypothetical protein CAPTEDRAFT_221751 [Capitella teleta]
Length = 241
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 11/132 (8%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C + + V + +NV+H+ CF C C +L GE+F +++ ++ C+ Y + +
Sbjct: 48 KCAKCCRNIQATDWVRRARENVYHLACFACDACKRQLSTGEEFALQENRVLCKTHYVEAI 107
Query: 66 EMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGL 125
E G P S ++ + ++ KR RT T +Q + +A+F++ P + E +
Sbjct: 108 E-------GGP----GSDENSNQKQKTKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 156
Query: 126 ARDTGLSVRIVQ 137
A+ TGLS R+ Q
Sbjct: 157 AQITGLSKRVTQ 168
>gi|109081997|ref|XP_001105068.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Macaca
mulatta]
Length = 359
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ D+V+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 84 LFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSH-----DGRRGPKRP------------RTILTTQQR 104
+E + P L S H GR+ RP RT+L +Q
Sbjct: 144 GLLLERAAAGSPRSPGPLPGSRGLHLPDAGSGRQPALRPHVHKQTEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
+ + +P+P ++E L TGLS R++
Sbjct: 204 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 235
>gi|410908008|ref|XP_003967483.1| PREDICTED: insulin gene enhancer protein ISL-2A-like [Takifugu
rubripes]
Length = 359
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 23/156 (14%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C+ +LVM+ D+V+H++CF C VC L G++F +++ +L CR D+
Sbjct: 84 LFGIKCAKCNMGFCSSDLVMRARDSVYHMECFRCSVCCRHLLPGDEFSLREDELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPF-------------DLIT-----SSKSHDGRRGPK--RPRTILTT 101
+++ + G P D +T ++H ++ K R RT+LT
Sbjct: 144 ---CLLMERASAGSPLSPGTIHSRPLHISDAVTVRHPPHHRNHGHKQSEKTTRIRTVLTE 200
Query: 102 QQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+Q + + +P+P ++E L TGLS R+V+
Sbjct: 201 KQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVVR 236
>gi|391340116|ref|XP_003744391.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Metaseiulus
occidentalis]
Length = 460
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 31/163 (19%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C + VM+ +FH+ CF C+ C +L G++F I++ +LFC+ D+
Sbjct: 161 LFGAKCSKCGLSFSRSDFVMRARGKIFHIDCFRCIACSRQLIPGDEFAIREDELFCKADH 220
Query: 62 EKEVEMLQGYAQGIP-----------------------FDLITSSKSHDGRRG----PKR 94
++L G+P S+ H G RG P R
Sbjct: 221 ----DVLGPRGNGLPSLGGNGAGGGGGGPGGGGGGGSAGGGSVRSQGHKGGRGGEHKPTR 276
Query: 95 PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RT+L +Q + + +P+P ++E L TGLS R+++
Sbjct: 277 VRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 319
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+ C+GC ++ ++ + D +H C CV C L +++G+ +C+ DY +
Sbjct: 101 ISLCVGCGSQIQDQYILRVSPDLEWHASCLKCVECLQFLDESCTCFVREGKTYCKSDYHR 160
>gi|390339027|ref|XP_781774.3| PREDICTED: insulin gene enhancer protein ISL-1-like
[Strongylocentrotus purpuratus]
Length = 402
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC CS+ ++ VM+ + ++H+ CF CV C +L G++F +++ LFC+ D+
Sbjct: 108 LFGTKCAKCSQGFTKNDFVMRARNKIYHIDCFRCVACSRQLIPGDEFALREDGLFCKADH 167
Query: 62 E--------KEVEMLQ--GY-----AQGIPFDLITSSKSH-DGRRGPKRPRTILTTQQRR 105
E +V + Y A+ +P + +S +SH + P R RT+L +Q
Sbjct: 168 EVMERPGDRDQVPNVNHRNYINATRAEPMP-NRTSSGRSHVHKQEKPTRVRTVLNEKQLH 226
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L T LS R+++
Sbjct: 227 TLRTCYAANPRPDALMKEQLVEMTQLSPRVIR 258
>gi|391339813|ref|XP_003744241.1| PREDICTED: sodium-coupled monocarboxylate transporter 1-like
[Metaseiulus occidentalis]
Length = 707
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
+C C+ + + V + D V+H+ CF C C +L GE+F + G++ C+ +
Sbjct: 515 RCSKCTRGIQSSDWVRRARDQVYHLACFACEECKRQLSTGEEFALHDGRVLCKIHF---C 571
Query: 66 EMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGL 125
E++ +Q + + + H+ R KR RT T +Q + +A+F + P + E +
Sbjct: 572 ELIDPGSQSTDDN---ADQDHNPRAKTKRVRTTFTEEQLQVLQANFNLDSNPDGQDLERI 628
Query: 126 ARDTGLSVRIVQ 137
A+ TGLS R+ Q
Sbjct: 629 AQITGLSKRVTQ 640
Score = 35.8 bits (81), Expect = 6.7, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNV-FHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
C GC + + E V +DN +HV C C VC L++ + ++C+ DY ++
Sbjct: 455 CGGCGQLIL--ERVQLQVDNCSWHVDCLRCCVCDCLLEKDSTCFFRDNNVYCKQDYARQ 511
>gi|1708562|sp|P53410.1|ISL2_CHICK RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|531181|gb|AAA62172.1| sequence encoding 37 predicted 5' amino acids has not been
determined, partial [Gallus gallus]
Length = 319
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 13/148 (8%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ D+V+H++CF C CG +L G+QF +++ L CR D+
Sbjct: 47 LFGIKCAQCRAAFSSSDLVMRARDHVYHLECFRCAACGRQLLPGDQFCLRERDLLCRADH 106
Query: 62 EKEVEMLQGYAQGIP-------------FDLITSSKSHDGRRGPKRPRTILTTQQRRAFK 108
+ P +SH R RT+L +Q +
Sbjct: 107 GPPPDGAAARGPRSPAPPPAHLAEPVPGRPPGPRPQSHKAAEKTTRVRTVLNEKQLHTLR 166
Query: 109 ASFEISPKPCRKVREGLARDTGLSVRIV 136
+ +P+P ++E L TGLS R++
Sbjct: 167 TCYAANPRPDALMKEQLVEMTGLSPRVI 194
>gi|158296017|ref|XP_001237835.2| AGAP006537-PA [Anopheles gambiae str. PEST]
gi|157016310|gb|EAU76621.2| AGAP006537-PA [Anopheles gambiae str. PEST]
Length = 271
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 20/144 (13%)
Query: 3 YVKK----CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCR 58
Y+KK C C+ + + V + + VFH+ CF C CG +L GEQF I + ++ C+
Sbjct: 61 YIKKFKTSCAKCARSISATDWVRRAREYVFHLACFACDSCGRQLSTGEQFAICEDRVLCK 120
Query: 59 PDYEKEVEMLQGYAQGIPFDLITSSK-----SHDGRRGPKRPRTILTTQQRRAFKASFEI 113
Y + ++ D TSS+ +G+ KR RT T +Q + +A+F++
Sbjct: 121 THYMELID-----------DGTTSSEDGLDADGNGKNKTKRIRTTFTEEQIQILQANFQV 169
Query: 114 SPKPCRKVREGLARDTGLSVRIVQ 137
P + E +A TGLS R+ Q
Sbjct: 170 DSNPDGQDLERIALATGLSKRVTQ 193
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
K C C+E + D + + + +H C C VC L+R ++ G ++C+ DY K+
Sbjct: 6 KTCGSCAEPI-TDRYIFEVNGSAWHGSCLRCTVCFCPLERQVSCYLRDGDMYCKSDYIKK 64
>gi|321477982|gb|EFX88940.1| hypothetical protein DAPPUDRAFT_4176 [Daphnia pulex]
Length = 199
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 66/139 (47%), Gaps = 15/139 (10%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC CS + + V + ++V+H+ CF C C +L GE+F + +G++ C+ Y
Sbjct: 58 FGAKCARCSRSISAADWVRRAREHVYHLACFACDACRRQLSTGEEFALHEGRVLCKTHY- 116
Query: 63 KEVEMLQGYAQGIPFDLITSSKSHD----GRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
L G G TSS D GR KR RT T +Q +A+F + P
Sbjct: 117 -----LDGLDAG-----STSSDETDPEGGGRSKSKRVRTTFTEEQLHVLQANFLLDSNPD 166
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ E +A TGLS R+ Q
Sbjct: 167 GQDLERIANLTGLSKRVTQ 185
>gi|487805|gb|AAA80274.1| LIM domain homeobox protein, partial [Danio rerio]
Length = 167
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C+ +LVM+ DNV+H++CF C VC L G++F ++ +L CR D+
Sbjct: 14 LFGIKCAKCNIGFCSSDLVMRARDNVYHMECFRCSVCSRHLLPGDEFSLRDEELLCRADH 73
Query: 62 EKEVEMLQGYAQGIPFDLITS---------------SKSHDGRRGPK--RPRTILTTQQR 104
+E + P ++ +S ++H ++ K R RT+L +Q
Sbjct: 74 GLLMERASAGSPISPGNIHSSRPLHIPEPVPVRQPPHRNHVHKQSEKTTRVRTVLNEKQL 133
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 134 HTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 166
>gi|313233722|emb|CBY09892.1| unnamed protein product [Oikopleura dioica]
Length = 403
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY++ C C L P +LV K + FHV CF C C L G++F++ + +LFCRP +
Sbjct: 101 LYMEHCAKCDHALQPTDLVHKVKNCTFHVDCFSCSSCVRVLVSGDEFLLIETRLFCRPCH 160
Query: 62 EKEVEMLQ-----------------GYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQR 104
E E E + G + + +T SK +R RT+L +Q
Sbjct: 161 ELESEQSRIGSRYITRTAGETDRKYGAPEQAENNKVT-SKFFSMSSYFRRVRTVLNEKQL 219
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ ++ +P+P ++E L TGLS R+++
Sbjct: 220 HTLRTCYQANPRPDALMKEQLVEMTGLSPRVIR 252
>gi|149691761|ref|XP_001490268.1| PREDICTED: insulin gene enhancer protein ISL-2 [Equus caballus]
Length = 359
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ D+V+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 84 LFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSH-----DGRRGPKRP------------RTILTTQQR 104
+E + P L + H GR+ RP RT+L +Q
Sbjct: 144 GLLLERAAAGSPRSPGPLPGARGLHLPDPGAGRQASLRPHVHKQTEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 204 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 236
>gi|328781528|ref|XP_001121397.2| PREDICTED: LIM/homeobox protein Awh [Apis mellifera]
Length = 352
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ + KC C +G + V + + V+H+ CF C C +L GEQF + +L C+
Sbjct: 132 LTFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAH 191
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRG-----PKRPRTILTTQQRRAFKASFEISP 115
Y +++++G + +SS+ D G KR RT T +Q +A+F++
Sbjct: 192 Y---LDVVEG-------NNTSSSEDCDSEHGGKGSKTKRVRTTFTEEQLSVLQANFQLDS 241
Query: 116 KPCRKVREGLARDTGLSVRIVQ 137
P + E +A TGLS R+ Q
Sbjct: 242 NPDGQDLERIAHVTGLSKRVTQ 263
>gi|380013576|ref|XP_003690828.1| PREDICTED: LIM/homeobox protein Awh-like [Apis florea]
Length = 351
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ + KC C +G + V + + V+H+ CF C C +L GEQF + +L C+
Sbjct: 131 LTFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAH 190
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRG-----PKRPRTILTTQQRRAFKASFEISP 115
Y +++++G + +SS+ D G KR RT T +Q +A+F++
Sbjct: 191 Y---LDVVEG-------NNTSSSEDCDSEHGGKGSKTKRVRTTFTEEQLSVLQANFQLDS 240
Query: 116 KPCRKVREGLARDTGLSVRIVQ 137
P + E +A TGLS R+ Q
Sbjct: 241 NPDGQDLERIAHVTGLSKRVTQ 262
>gi|312371799|gb|EFR19895.1| hypothetical protein AND_21633 [Anopheles darlingi]
Length = 284
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 6/132 (4%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC CS + + V + D +FH+ CF C CG +L GEQF + ++ C+ Y +
Sbjct: 50 KCARCSRTISATDWVRRARDLIFHLACFACDSCGRQLSTGEQFALVDDKVLCKTHYSEMF 109
Query: 66 EMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGL 125
+ G D + + KR RT T +Q + +A+F I P + E +
Sbjct: 110 DC------GTSSDDGCEADGYQKNSKTKRVRTTFTEEQLQILQANFNIDSNPDGQDLERI 163
Query: 126 ARDTGLSVRIVQ 137
A TGLS R+ Q
Sbjct: 164 ASVTGLSKRVTQ 175
>gi|410912158|ref|XP_003969557.1| PREDICTED: insulin gene enhancer protein ISL-3-like [Takifugu
rubripes]
Length = 359
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C+ +LVM+ D+V+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 84 LFGIKCAKCNLGFSSSDLVMRARDHVYHIECFRCSVCSRQLLPGDEFSLREEELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLIT---------------SSKSHDGRRGPK--RPRTILTTQQR 104
+E + P L + + ++H ++ K R RT+L +Q
Sbjct: 144 SILLEKSSAGSPISPGHLHSNRALHLTDPVSMRQATHRNHVHKQSEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 204 HTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 236
>gi|340721085|ref|XP_003398956.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus terrestris]
Length = 329
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ + KC C +G + V + + V+H+ CF C C +L GEQF + +L C+
Sbjct: 109 LTFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAH 168
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRG-----PKRPRTILTTQQRRAFKASFEISP 115
Y +++++G + +SS+ D G KR RT T +Q +A+F++
Sbjct: 169 Y---LDVVEG-------NNTSSSEDCDSEHGGKGSKTKRVRTTFTEEQLSVLQANFQLDS 218
Query: 116 KPCRKVREGLARDTGLSVRIVQ 137
P + E +A TGLS R+ Q
Sbjct: 219 NPDGQDLERIAHVTGLSKRVTQ 240
>gi|350404762|ref|XP_003487212.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus impatiens]
Length = 331
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ + KC C +G + V + + V+H+ CF C C +L GEQF + +L C+
Sbjct: 111 LTFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAH 170
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRG-----PKRPRTILTTQQRRAFKASFEISP 115
Y +++++G + +SS+ D G KR RT T +Q +A+F++
Sbjct: 171 Y---LDVVEG-------NNTSSSEDCDSEHGGKGSKTKRVRTTFTEEQLSVLQANFQLDS 220
Query: 116 KPCRKVREGLARDTGLSVRIVQ 137
P + E +A TGLS R+ Q
Sbjct: 221 NPDGQDLERIAHVTGLSKRVTQ 242
>gi|158296021|ref|XP_316578.4| AGAP006540-PA [Anopheles gambiae str. PEST]
gi|157016312|gb|EAA11207.4| AGAP006540-PA [Anopheles gambiae str. PEST]
Length = 334
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 6/135 (4%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC CS + + V + D +FH+ CF C CG +L GEQF + ++ C+ Y
Sbjct: 80 FGTKCARCSRTISATDWVRRARDLIFHLACFACDSCGRQLSTGEQFALVDDKVLCKTHYS 139
Query: 63 KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
+ + G D + + KR RT T +Q + +A+F I P +
Sbjct: 140 EMFDC------GTSSDDGCEADGYQKNNKTKRVRTTFTEEQLQILQANFNIDSNPDGQDL 193
Query: 123 EGLARDTGLSVRIVQ 137
E +A TGLS R+ Q
Sbjct: 194 ERIASVTGLSKRVTQ 208
>gi|47225812|emb|CAF98292.1| unnamed protein product [Tetraodon nigroviridis]
Length = 360
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 23/152 (15%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C+ +LVM+ DNV+H++CF C VC L G++F +++ +L CR D+
Sbjct: 88 KCAKCNVGFCSSDLVMRARDNVYHMECFRCSVCCRHLLPGDEFSLREDELLCRADH---C 144
Query: 66 EMLQGYAQGIPF-------------DLIT-----SSKSHDGRRGPK--RPRTILTTQQRR 105
+++ + G P D ++ ++H ++ K R RT+LT +Q
Sbjct: 145 LLMERASAGSPLSPGPIHSRPLHISDAVSVRHPPHHRNHVHKQSEKTTRIRTVLTEKQLH 204
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+V+
Sbjct: 205 TLRTCYNANPRPDALMKEQLVEMTGLSPRVVR 236
>gi|301623765|ref|XP_002941184.1| PREDICTED: LIM/homeobox protein Lhx6-like [Xenopus (Silurana)
tropicalis]
Length = 389
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 156 KCARCGRQIYASDWVRRARGNAYHLACFACYSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 215
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ GI + S+ + KR RT T +Q + +A F P +
Sbjct: 216 ENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 275
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 276 QKLADMTGLSRRVIQ 290
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 105 DRYLLKVNNLIWHVRCLECSVCRTSLRQHNSCYIKNKEIFCKMDY 149
>gi|170034020|ref|XP_001844873.1| arrowhead [Culex quinquefasciatus]
gi|167875281|gb|EDS38664.1| arrowhead [Culex quinquefasciatus]
Length = 304
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC CS + + V + +FH+ CF C CG +L GEQF + ++ C+ Y
Sbjct: 67 FGAKCARCSRSISASDWVRRARKMIFHLACFACDSCGRQLSTGEQFALADDKVLCKKHYS 126
Query: 63 KEVEMLQGYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
+ + G D L S+KS KR RT T +Q + +A+F I P +
Sbjct: 127 EFFDCGTSSDDGCEADGLQKSNKS-------KRVRTTFTEEQLQILQANFNIDSNPDGQD 179
Query: 122 REGLARDTGLSVRIVQ 137
E +A TGLS R+ Q
Sbjct: 180 LERIASVTGLSKRVTQ 195
>gi|18858907|ref|NP_571045.1| insulin gene enhancer protein isl-2a [Danio rerio]
gi|1708561|sp|P53406.1|ISL2A_DANRE RecName: Full=Insulin gene enhancer protein isl-2a; Short=Islet-2A;
AltName: Full=Insulin gene enhancer protein isl-2;
Short=Islet-2
gi|871001|emb|CAA61283.1| Islet-2 protein [Danio rerio]
gi|1037166|dbj|BAA07484.1| zfIsl-2 [Danio rerio]
gi|190336908|gb|AAI62631.1| Islet2a [Danio rerio]
gi|190339440|gb|AAI62833.1| Islet2a [Danio rerio]
Length = 359
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C+ +LVM+ DNV+H++CF C VC L G++F ++ +L CR D+
Sbjct: 84 LFGIKCAKCNIGFCSSDLVMRARDNVYHMECFRCSVCSRHLLPGDEFSLRDEELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLITS---------------SKSHDGRRGPK--RPRTILTTQQR 104
+E + P ++ +S ++H ++ K R RT+L +Q
Sbjct: 144 GLLMERASAGSPISPGNIHSSRPLHIPEPVPVRQPPHRNHVHKQSEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 204 HTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 236
>gi|307182932|gb|EFN69942.1| LIM/homeobox protein Awh [Camponotus floridanus]
Length = 458
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C +G + V + D V+H+ CF C C +L GEQF + +L C+ Y +
Sbjct: 244 KCAKCGRSMGAGDWVRRAKDRVYHLACFACDACSRQLSTGEQFALLDARLLCKAHY---L 300
Query: 66 EMLQGYAQGIPFDLITSSKSHDGRRG-----PKRPRTILTTQQRRAFKASFEISPKPCRK 120
++++G + +SS+ D G KR RT T +Q +A+F++ P +
Sbjct: 301 DVVEG-------NNTSSSEDCDSEHGGKGSKTKRVRTTFTEEQLAVLQANFQMDSNPDGQ 353
Query: 121 VREGLARDTGLSVRIVQ 137
E +A+ TGLS R+ Q
Sbjct: 354 DLERIAQVTGLSKRVTQ 370
>gi|195016322|ref|XP_001984389.1| GH16430 [Drosophila grimshawi]
gi|193897871|gb|EDV96737.1| GH16430 [Drosophila grimshawi]
Length = 239
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C + + V + D VFH+ CF C CG +L GEQF + ++ C+ Y + V
Sbjct: 32 KCSKCCRSISASDWVRRARDLVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHYLETV 91
Query: 66 E-MLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
E G D SK+ KR RT T +Q + +A+F+I P + E
Sbjct: 92 EGGTTSSDDGCDGDGYHKSKT-------KRVRTTFTEEQLQVLQANFQIDSNPDGQDLER 144
Query: 125 LARDTGLSVRIVQ 137
+A TGLS R+ Q
Sbjct: 145 IASVTGLSKRVTQ 157
>gi|332250744|ref|XP_003274511.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5 [Nomascus
leucogenys]
Length = 323
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 17/145 (11%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY-EKEV 65
C GC + D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGCERPIL-DRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDFFRPDA 61
Query: 66 EMLQGYAQGIP-FDLITSSKSHDG----------RRGPKR--PRTILTTQQRRAFKASFE 112
+ A+ + FD +S S D G KR PRT + +Q KA+F
Sbjct: 62 PNIAVLAKRLMIFDKTDNSTSSDKETANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFA 121
Query: 113 ISPKPCRKVREGLARDTGLSVRIVQ 137
+PKP R +RE LA++TGL++R++Q
Sbjct: 122 ATPKPTRHIREQLAQETGLNMRVIQ 146
>gi|300795417|ref|NP_001178166.1| insulin gene enhancer protein ISL-2 [Bos taurus]
Length = 359
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ D+V+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 84 LFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSH-----DGRRGPKRP------------RTILTTQQR 104
+E + P L + H GR+ RP RT+L +Q
Sbjct: 144 GLLLERAAAGSPRSPGPLPGARGLHLPDPGSGRQPSLRPHVHKQTEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 204 HTLRTCYAANPRPDALMKEHLVEMTGLSPRVIR 236
>gi|383857875|ref|XP_003704429.1| PREDICTED: LIM/homeobox protein Awh-like [Megachile rotundata]
Length = 358
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ + KC C +G + V + + V+H+ CF C C +L GEQF + +L C+
Sbjct: 138 LTFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAH 197
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRG-----PKRPRTILTTQQRRAFKASFEISP 115
Y +++++G + +SS+ D G KR RT T +Q +A+F++
Sbjct: 198 Y---LDVVEG-------NNTSSSEDCDSEHGGKGSKTKRVRTTFTEEQLSVLQANFQLDS 247
Query: 116 KPCRKVREGLARDTGLSVRIVQ 137
P + E +A TGLS R+ Q
Sbjct: 248 NPDGQDLERIAHVTGLSKRVTQ 269
>gi|195161060|ref|XP_002021388.1| GL25299 [Drosophila persimilis]
gi|198465223|ref|XP_001353549.2| GA10520 [Drosophila pseudoobscura pseudoobscura]
gi|194118501|gb|EDW40544.1| GL25299 [Drosophila persimilis]
gi|198150064|gb|EAL31062.2| GA10520 [Drosophila pseudoobscura pseudoobscura]
Length = 275
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C + + V + D VFH+ CF C CG +L GEQF + ++ C+ Y
Sbjct: 65 FGAKCSKCCRGISASDWVRRARDLVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHYL 124
Query: 63 KEVE-MLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
+ VE +G D SK+ KR RT T +Q + +A+F+I P +
Sbjct: 125 ETVEGGTTSSDEGCDGDGYHKSKT-------KRVRTTFTEEQLQVLQANFQIDSNPDGQD 177
Query: 122 REGLARDTGLSVRIVQ 137
E +A TGLS R+ Q
Sbjct: 178 LERIASVTGLSKRVTQ 193
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
++ C C E + D ++ +H C C +C L R + I++ Q++C+ DY K
Sbjct: 5 LRSCAACGEPI-SDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSK 63
Query: 64 E 64
Sbjct: 64 N 64
>gi|403304937|ref|XP_003943035.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 359
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ D+V+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 84 LFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSH-----DGRRGPKRP------------RTILTTQQR 104
+E + P L + H GR+ RP RT+L +Q
Sbjct: 144 GLLLERAAAGSPRSPGPLPGARGLHLPDPGSGRQPALRPHVHKQTEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 204 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 236
>gi|432095418|gb|ELK26617.1| LIM homeobox transcription factor 1-beta [Myotis davidii]
Length = 76
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 44/57 (77%)
Query: 12 EKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVEML 68
EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DYEKE ++L
Sbjct: 2 EKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEKEKDLL 58
>gi|345329744|ref|XP_001512364.2| PREDICTED: LIM/homeobox protein Lhx6 [Ornithorhynchus anatinus]
Length = 364
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 131 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 190
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ GI + S+ + KR RT T +Q + +A F P +
Sbjct: 191 ENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 250
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 251 QKLADMTGLSRRVIQ 265
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 80 DRYLLKVNNLIWHVRCLECSVCRTSLRQQSSCYIKNKEIFCKVDY 124
>gi|431920332|gb|ELK18367.1| Insulin protein enhancer protein ISL-2 [Pteropus alecto]
Length = 306
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ D+V+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 88 LFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 147
Query: 62 EKEVEMLQGYAQGIPFDLIT--------------SSKSHDGRRGPK--RPRTILTTQQRR 105
+E + P L + + H ++ K R RT+L +Q
Sbjct: 148 GLLLERAAATSPSSPGPLPARGLHLPDPGAGRQPAPRPHAHKQAEKTTRVRTVLNEKQLH 207
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 208 TLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 239
>gi|426248250|ref|XP_004017877.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein ISL-2
[Ovis aries]
Length = 366
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ D+V+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 84 LFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSH-----DGRRGPKRP------------RTILTTQQR 104
+E + P L + H GR+ RP RT+L +Q
Sbjct: 144 GLLLERAAAGSPRSPGPLPGARGLHLPDPGSGRQPSLRPHVHKQTEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
+ + +P+P ++E L TGLS R++
Sbjct: 204 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 235
>gi|21956641|ref|NP_665804.1| insulin gene enhancer protein ISL-2 [Homo sapiens]
gi|114658283|ref|XP_001147206.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Pan
troglodytes]
gi|297697192|ref|XP_002825752.1| PREDICTED: insulin gene enhancer protein ISL-2 [Pongo abelii]
gi|426379888|ref|XP_004056619.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Gorilla
gorilla gorilla]
gi|20978495|sp|Q96A47.1|ISL2_HUMAN RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|15080438|gb|AAH11967.1| ISL LIM homeobox 2 [Homo sapiens]
gi|15082435|gb|AAH12136.1| ISL LIM homeobox 2 [Homo sapiens]
gi|119619626|gb|EAW99220.1| ISL2 transcription factor, LIM/homeodomain, (islet-2) [Homo
sapiens]
gi|167773881|gb|ABZ92375.1| ISL LIM homeobox 2 [synthetic construct]
gi|193785483|dbj|BAG50849.1| unnamed protein product [Homo sapiens]
Length = 359
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ D+V+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 84 LFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSH-----DGRRGPKRP------------RTILTTQQR 104
+E + P L + H GR+ RP RT+L +Q
Sbjct: 144 GLLLERAAAGSPRSPGPLPGARGLHLPDAGSGRQPALRPHVHKQTEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 204 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 236
>gi|71361857|gb|AAZ30032.1| LIM homeodomain protein, partial [Gallus gallus]
Length = 235
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 90 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 149
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ GI + S+ + KR RT T +Q + +A F P +
Sbjct: 150 ENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 209
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 210 QKLADMTGLSRRVIQ 224
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 39 DRYLLKVNNLIWHVRCLECSVCRTSLRQQHSCYIKNKEIFCKMDY 83
>gi|296475432|tpg|DAA17547.1| TPA: ISL LIM homeobox 2 [Bos taurus]
gi|440909295|gb|ELR59218.1| Insulin enhancer protein ISL-2 [Bos grunniens mutus]
Length = 359
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ D+V+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 84 LFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSH-----DGRRGPKRP------------RTILTTQQR 104
+E + P L + H GR+ RP RT+L +Q
Sbjct: 144 GLLLERAAAGSPRSPGPLPGARGLHLPDPGSGRQPSLRPHVHKQTEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 204 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 236
>gi|348555669|ref|XP_003463646.1| PREDICTED: insulin gene enhancer protein ISL-2-like [Cavia
porcellus]
Length = 371
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ D+VFHV+CF C VC +L G++F +++ +L CR D+
Sbjct: 84 LFGIKCAKCQVGFSSSDLVMRARDSVFHVECFRCAVCSRQLLPGDEFSLREHELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSH-----DGRRGPKRP------------RTILTTQQR 104
+E + P + + H G++ RP RT+L +Q
Sbjct: 144 GLLLERAAAGSPRSPGPIPGARALHLPEPVPGQQPALRPHVHKQAEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 204 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 236
>gi|296236843|ref|XP_002763501.1| PREDICTED: insulin gene enhancer protein ISL-2 [Callithrix jacchus]
Length = 359
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ D+V+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 84 LFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSH-----DGRRGPKRP------------RTILTTQQR 104
+E + P L + H GR+ RP RT+L +Q
Sbjct: 144 GLLLERAAADSPRSPGPLPGARGLHLSDPGSGRQPTLRPHVHKQTEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
+ + +P+P ++E L TGLS R++
Sbjct: 204 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 235
>gi|312385469|gb|EFR29961.1| hypothetical protein AND_00756 [Anopheles darlingi]
Length = 344
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ + KC C + + V K D VFH+ CF C CG +L GEQF + ++ CR
Sbjct: 111 LTFGAKCSKCCRTIAASDWVRKARDLVFHLACFSCDTCGRQLSTGEQFALIDDKVMCRSH 170
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
Y V+ + +K+ KR RT T +Q + +A+F+I P +
Sbjct: 171 YMDTVDDGSNSSDDGCSSSDGYNKN-----KSKRVRTTFTEEQLQVLQANFQIDSNPDGQ 225
Query: 121 VREGLARDTGLSVRIVQ 137
E +A+ TGLS R+ Q
Sbjct: 226 DLERIAQLTGLSKRVTQ 242
>gi|3319761|emb|CAA04011.1| Lhx6 protein [Mus musculus]
Length = 361
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C + GE+FV+ + ++FCR Y+ +
Sbjct: 148 KCALCGRQIYASDWVRRARGNAYHLACFACFSCKRHVSTGEEFVLVEEKVFCRIHYDTMI 207
Query: 66 EMLQGYAQG---IPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ + + S+ + KR RT T +Q + +A F P +
Sbjct: 208 ENLKRAAENGNVLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 267
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 268 QKLADMTGLSRRVIQ 282
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + + HV+C C VC + L++ IK +++C+ DY
Sbjct: 97 DRYLLKVNNLICHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 141
>gi|334311482|ref|XP_001364897.2| PREDICTED: LIM/homeobox protein Lhx6 [Monodelphis domestica]
Length = 391
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 158 KCARCGRQIFASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 217
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ GI + S+ + KR RT T +Q + +A F P +
Sbjct: 218 ENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 277
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 278 QKLADMTGLSRRVIQ 292
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 107 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 151
>gi|1708557|sp|P53408.1|ISL2A_ONCTS RecName: Full=Insulin gene enhancer protein ISL-2A; Short=Islet-2A
Length = 358
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C+ +LVM+ DNV+H++CF C VC L G++F ++ +L CR D+
Sbjct: 84 LFGIKCANCNIGFCSSDLVMRARDNVYHMECFRCSVCSRHLLPGDEFSLRDEELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFD--LITSSKSHDG-----RRGPKRP------------RTILTTQ 102
+++ + G P +I S H R+ P R RT+L +
Sbjct: 144 GL---LMEQASAGSPLSPGIIHSRSLHIADPVSVRQPPHRNHVHKQSEKTTRVRTVLNEK 200
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
Q + + +P+P ++E L TGLS R+++
Sbjct: 201 QLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 235
>gi|449478466|ref|XP_002188127.2| PREDICTED: LIM/homeobox protein Lhx6 [Taeniopygia guttata]
Length = 421
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 185 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 244
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ GI + S+ + KR RT T +Q + +A F P
Sbjct: 245 TMIENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 304
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 305 QTLQKLADMTGLSRRVIQ 322
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 137 DRYLLKVNNLIWHVRCLECSVCRTSLRQQHSCYIKNKEIFCKMDY 181
>gi|51571915|ref|NP_001004015.1| LIM/homeobox protein Lhx6 [Danio rerio]
gi|50953777|gb|AAT90495.1| Lhx6 [Danio rerio]
gi|190336767|gb|AAI62225.1| LIM homeobox 6 [Danio rerio]
Length = 375
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ V
Sbjct: 157 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMV 216
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 217 ENLKRAAESGSGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 276
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 277 QKLADMTGLSRRVIQ 291
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 106 DRYLLKVNNLIWHVRCLECSVCRTSLRQHSSCYIKNKEIFCKMDY 150
>gi|403304939|ref|XP_003943036.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 360
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 18/154 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ D+V+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 84 LFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSH------DGRRGPKRP------------RTILTTQQ 103
+E + P L + H GR+ RP RT+L +Q
Sbjct: 144 GLLLERAAAGSPRSPGPLPGARGLHLPADPGSGRQPALRPHVHKQTEKTTRVRTVLNEKQ 203
Query: 104 RRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 204 LHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 237
>gi|395505631|ref|XP_003757143.1| PREDICTED: LIM/homeobox protein Lhx6 [Sarcophilus harrisii]
Length = 363
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 127 FGTKCARCGRQIFASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 186
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ GI + S+ + KR RT T +Q + +A F P
Sbjct: 187 TMIENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 246
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 247 QTLQKLADMTGLSRRVIQ 264
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 79 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|195375542|ref|XP_002046559.1| GJ12418 [Drosophila virilis]
gi|194153717|gb|EDW68901.1| GJ12418 [Drosophila virilis]
Length = 239
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C + + V + D VFH+ CF C CG +L GEQF + ++ C+ Y + V
Sbjct: 32 KCSKCCRGISASDWVRRARDLVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHYLETV 91
Query: 66 E-MLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
E G D SK+ KR RT T +Q + +A+F+I P + E
Sbjct: 92 EGGTTSSDDGCDGDGYHKSKT-------KRVRTTFTEEQLQVLQANFQIDSNPDGQDLER 144
Query: 125 LARDTGLSVRIVQ 137
+A TGLS R+ Q
Sbjct: 145 IASVTGLSKRVTQ 157
>gi|61287134|dbj|BAD91092.1| transcription factor Lmx1b [Danio rerio]
Length = 119
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 10 CSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVEMLQ 69
C EK+ P E VM+ L+ V+H+ CF C VC + ++G++FV+K GQL C+ DYE+E ++L
Sbjct: 1 CMEKIAPTEFVMRALECVYHLNCFCCCVCDRQQRKGDEFVLKDGQLXCKSDYEREKDLL- 59
Query: 70 GYAQGIPFDLITSSKSHD 87
+ D S KS D
Sbjct: 60 ---GSVSPDDSDSEKSED 74
>gi|195125467|ref|XP_002007199.1| GI12512 [Drosophila mojavensis]
gi|193918808|gb|EDW17675.1| GI12512 [Drosophila mojavensis]
Length = 239
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C + + V + D VFH+ CF C CG +L GEQF + ++ C+ Y + V
Sbjct: 32 KCSKCCRGISASDWVRRARDLVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHYLETV 91
Query: 66 E-MLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
E G D SK+ KR RT T +Q + +A+F+I P + E
Sbjct: 92 EGGTTSSDDGCDGDGYHKSKT-------KRVRTTFTEEQLQVLQANFQIDSNPDGQDLER 144
Query: 125 LARDTGLSVRIVQ 137
+A TGLS R+ Q
Sbjct: 145 IASVTGLSKRVTQ 157
>gi|332844416|ref|XP_003314842.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Pan
troglodytes]
gi|426379890|ref|XP_004056620.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Gorilla
gorilla gorilla]
Length = 360
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 18/154 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ D+V+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 84 LFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSH------DGRRGPKRP------------RTILTTQQ 103
+E + P L + H GR+ RP RT+L +Q
Sbjct: 144 GLLLERAAAGSPRSPGPLPGARGLHLPADAGSGRQPALRPHVHKQTEKTTRVRTVLNEKQ 203
Query: 104 RRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 204 LHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 237
>gi|348513701|ref|XP_003444380.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oreochromis niloticus]
Length = 375
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ V
Sbjct: 157 KCARCGRQIYASDWVRRARGNAYHLACFACYSCKRQLSTGEEFGLVEEKVLCRIHYDTMV 216
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ GI + ++ + KR RT T +Q + +A F P +
Sbjct: 217 ENLKRAAESGNGITLEGAVPTEQDSQPKPAKRARTSFTAEQLQIMQAQFAQDNNPDAQTL 276
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 277 QKLADMTGLSRRVIQ 291
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 106 DRYLLKVNNLIWHVRCLECSVCRTSLRQHSSCYIKNKEIFCKMDY 150
>gi|363740595|ref|XP_001235421.2| PREDICTED: LIM/homeobox protein Lhx6 [Gallus gallus]
Length = 562
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 326 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 385
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ GI + S+ + KR RT T +Q + +A F P
Sbjct: 386 TMIENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 445
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 446 QTLQKLADMTGLSRRVIQ 463
>gi|432887976|ref|XP_004075005.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oryzias latipes]
Length = 366
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ V
Sbjct: 148 KCARCGRQIYASDWVRRARGNAYHLACFACYSCKRQLSTGEEFGLVEEKVLCRIHYDTMV 207
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ GI + ++ + KR RT T +Q + +A F P +
Sbjct: 208 ENLKRAAESGNGITLEGAVPTEQDSQPKPAKRARTSFTAEQLQIMQAQFAQDNNPDAQTL 267
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 268 QKLADMTGLSRRVIQ 282
>gi|308097158|gb|ADO14133.1| ISL1 transcription factor [Notophthalmus viridescens]
Length = 349
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC C+ ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCNIGFSKNDFVMRARSKVYHIECFSCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGI-------PFDLITSSKS----------HDGRRGPKRPRTILTTQQR 104
+ G A + P + S H R RT+L +Q
Sbjct: 134 DVVERASLGAADPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEKQL 193
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
+ + +P+P ++E L TGLS R++
Sbjct: 194 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 225
>gi|195441498|ref|XP_002068546.1| GK20529 [Drosophila willistoni]
gi|194164631|gb|EDW79532.1| GK20529 [Drosophila willistoni]
Length = 275
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C + + V + D VFH+ CF C CG +L GEQF + ++ C+ Y
Sbjct: 65 FGAKCSKCCRGISASDWVRRARDLVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHYL 124
Query: 63 KEVE-MLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
+ VE G D SK+ KR RT T +Q + +A+F+I P +
Sbjct: 125 ETVEGGTTSSDDGCDGDGYHKSKT-------KRVRTTFTEEQLQVLQANFQIDSNPDGQD 177
Query: 122 REGLARDTGLSVRIVQ 137
E +A TGLS R+ Q
Sbjct: 178 LERIASVTGLSKRVTQ 193
>gi|194749355|ref|XP_001957104.1| GF24228 [Drosophila ananassae]
gi|190624386|gb|EDV39910.1| GF24228 [Drosophila ananassae]
Length = 275
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C + + V + D VFH+ CF C CG +L GEQF + ++ C+ Y
Sbjct: 65 FGAKCSKCCRGISASDWVRRARDLVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHYL 124
Query: 63 KEVE-MLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
+ VE G D SK+ KR RT T +Q + +A+F+I P +
Sbjct: 125 ETVEGGTTSSDDGCDGDGYHKSKT-------KRVRTTFTEEQLQVLQANFQIDSNPDGQD 177
Query: 122 REGLARDTGLSVRIVQ 137
E +A TGLS R+ Q
Sbjct: 178 LERIASVTGLSKRVTQ 193
>gi|444724034|gb|ELW64656.1| LIM/homeobox protein Lhx6 [Tupaia chinensis]
Length = 336
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 108 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 167
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 168 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 227
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 228 QKLADMTGLSRRVIQ 242
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 57 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 101
>gi|348505840|ref|XP_003440468.1| PREDICTED: insulin gene enhancer protein isl-2a-like [Oreochromis
niloticus]
Length = 359
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C+ +LVM+ DNV+H++CF C VC L G++F ++ +L CR D+
Sbjct: 84 LFGIKCAKCNMGFCSSDLVMRARDNVYHMECFRCSVCSRHLLPGDEFSLRDDELLCRADH 143
Query: 62 EKEVE-------MLQGYAQGIPFDLITS----------SKSHDGRRGPKRPRTILTTQQR 104
+E + G P + + H R RT+L +Q
Sbjct: 144 GLMMERASAGSPLSPGNIHNRPLHISDPVSVRHPPHHRNHVHKPSEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 204 HTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 236
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/60 (21%), Positives = 27/60 (45%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+ C+GC ++ ++ + D +H C C C L ++ G+ +C+ DY +
Sbjct: 24 IAMCVGCGSQIHDQYILRVSPDLEWHAACLKCAECNQHLDETCTCFVRDGKTYCKRDYAR 83
>gi|44194074|gb|AAS46773.1| insulin enhancer binding protein [Rattus norvegicus]
Length = 326
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 21/155 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 134 --DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
Q + + +P+P ++E L TGLS R+++
Sbjct: 192 QLHTLRTRYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|449269080|gb|EMC79889.1| LIM/homeobox protein Lhx3, partial [Columba livia]
Length = 342
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 18/146 (12%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C GC++ + D ++K LD +H +C C C ++L E+ + ++C+ D+ K V
Sbjct: 4 CAGCNQHI-VDRFILKVLDRHWHSKCLKCSDCQTQL--AEKCFSRGDGVYCKEDFFKCVG 60
Query: 67 M----LQGYAQGIPFDLITSS-----------KSHDGRRGPKRPRTILTTQQRRAFKASF 111
G +G L+ S K + KRPRT +T +Q K ++
Sbjct: 61 TGRGETDGRTRGGTVWLVEDSRLVCKADYETAKQREAESTAKRPRTTITAKQLETLKNAY 120
Query: 112 EISPKPCRKVREGLARDTGLSVRIVQ 137
SPKP R VRE L+ +TGL +R+VQ
Sbjct: 121 NNSPKPARHVREQLSSETGLDMRVVQ 146
>gi|26355418|dbj|BAC41153.1| unnamed protein product [Mus musculus]
Length = 349
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 134 --DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
Q + + +P+P ++E L TGLS R++
Sbjct: 192 QLHTLRTWYAANPRPDALMKEQLVEMTGLSPRVI 225
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 27/58 (46%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
+ C+GC ++ ++ + D +H C C C L +++ G+ +C+ DY
Sbjct: 14 ISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCLVRDGKTYCKRDY 71
>gi|410922098|ref|XP_003974520.1| PREDICTED: insulin gene enhancer protein isl-1-like [Takifugu
rubripes]
Length = 331
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 21/155 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC C+ ++ VM+ V+H++CF CV C +L G++F ++ LFCR D+
Sbjct: 74 LYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALRDDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V A G P L +++ R RP RT+L +
Sbjct: 134 --DVVERASLASGDPLSPLHPARPLQMAAEPVSARTPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
Q + + +P+P ++E L TGLS R+++
Sbjct: 192 QLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 226
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
V C+GC ++ ++ + D +H C C C L ++ G+ +C+ DY
Sbjct: 14 VSLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDESCTCFVRDGKTYCKRDY 71
>gi|533419|gb|AAA81946.1| ISL-1 [Homo sapiens]
Length = 346
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 71 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 130
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 131 --DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 188
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
Q + + +P+P ++E L TGLS R++
Sbjct: 189 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 222
>gi|358336024|dbj|GAA54597.1| LIM homeobox transcription factor 1-beta [Clonorchis sinensis]
Length = 412
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
Query: 77 FDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
FDL + S S + KRPRTILT+ QRR FK+ FE++PKP RK+RE LA +TGL++R+V
Sbjct: 120 FDLDSDSGSG---KNSKRPRTILTSSQRRRFKSVFEMNPKPARKLRETLASETGLNIRVV 176
Query: 137 Q 137
Q
Sbjct: 177 Q 177
>gi|426246540|ref|XP_004017051.1| PREDICTED: insulin gene enhancer protein ISL-1 [Ovis aries]
Length = 349
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 21/154 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGIPFDLITSSKS-------------------HDGRRGPKRPRTILTTQ 102
+V G P + ++ H R RT+L +
Sbjct: 134 --DVVERASLGAGDPLSPLNPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
Q + + +P+P ++E L TGLS R++
Sbjct: 192 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 225
>gi|440908077|gb|ELR58138.1| Insulin enhancer protein ISL-1, partial [Bos grunniens mutus]
Length = 359
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 84 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 143
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 144 --DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 201
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
Q + + +P+P ++E L TGLS R++
Sbjct: 202 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 235
>gi|410927794|ref|XP_003977325.1| PREDICTED: LIM/homeobox protein Lhx6-like, partial [Takifugu
rubripes]
Length = 223
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ V
Sbjct: 5 KCARCGRQIYASDWVRRARGNAYHLACFACYSCKRQLSTGEEFGLVEEKVLCRIHYDTMV 64
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ GI + ++ + KR RT T +Q + +A F P +
Sbjct: 65 ENLKRAAESGNGITLEGAVPTEQDSQPKPAKRARTSFTAEQLQIMQAQFAQDNNPDAQTL 124
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 125 QKLADMTGLSRRVIQ 139
>gi|431908581|gb|ELK12174.1| Insulin protein enhancer protein ISL-1 [Pteropus alecto]
Length = 383
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 108 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 167
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 168 --DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 225
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
Q + + +P+P ++E L TGLS R++
Sbjct: 226 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 259
>gi|123981310|gb|ABM82484.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [synthetic
construct]
Length = 349
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 21/155 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 134 --DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
Q + + +P+P ++E L TGLS R+++
Sbjct: 192 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|158254920|dbj|BAF83431.1| unnamed protein product [Homo sapiens]
Length = 349
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 134 --DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
Q + + +P+P ++E L TGLS R++
Sbjct: 192 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 225
>gi|345304657|ref|XP_001508080.2| PREDICTED: insulin gene enhancer protein ISL-1-like
[Ornithorhynchus anatinus]
Length = 382
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 21/155 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 107 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 166
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 167 --DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 224
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
Q + + +P+P ++E L TGLS R+++
Sbjct: 225 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 259
>gi|133892051|ref|NP_001076596.1| LIM/homeobox protein Lhx6 isoform 4 [Mus musculus]
gi|148676720|gb|EDL08667.1| LIM homeobox protein 6, isoform CRA_a [Mus musculus]
Length = 348
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 130 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 189
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 190 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 249
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 250 QKLADMTGLSRRVIQ 264
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK +++C+ DY
Sbjct: 79 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 123
>gi|148676721|gb|EDL08668.1| LIM homeobox protein 6, isoform CRA_b [Mus musculus]
Length = 380
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 162 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 221
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 222 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 281
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 282 QKLADMTGLSRRVIQ 296
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK +++C+ DY
Sbjct: 111 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 155
>gi|410904301|ref|XP_003965630.1| PREDICTED: LIM/homeobox protein Lhx6-like [Takifugu rubripes]
Length = 373
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ V
Sbjct: 155 KCARCGRQIYASDWVRRARGNAYHLACFACYSCKRQLSTGEEFGLVEEKVLCRIHYDTMV 214
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ GI + ++ + KR RT T +Q + +A F P +
Sbjct: 215 ENLKRAAESGNGITLEGAVPTEQDSQPKPAKRARTSFTAEQLQIMQAQFAQDNNPDAQTL 274
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 275 QKLADMTGLSRRVIQ 289
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C C +++ D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 93 NTCASCGQEIL-DRYLLKVNNLIWHVRCLECSVCRTSLRQHSSCYIKNKEIFCKMDY 148
>gi|148676722|gb|EDL08669.1| LIM homeobox protein 6, isoform CRA_c [Mus musculus]
Length = 395
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 162 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 221
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 222 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 281
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 282 QKLADMTGLSRRVIQ 296
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK +++C+ DY
Sbjct: 111 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 155
>gi|94400881|ref|NP_059035.3| insulin gene enhancer protein ISL-1 [Rattus norvegicus]
gi|115387114|ref|NP_002193.2| insulin gene enhancer protein ISL-1 [Homo sapiens]
gi|149642655|ref|NP_001092600.1| insulin gene enhancer protein ISL-1 [Bos taurus]
gi|162287065|ref|NP_067434.3| insulin gene enhancer protein ISL-1 [Mus musculus]
gi|291395329|ref|XP_002714072.1| PREDICTED: islet-1 [Oryctolagus cuniculus]
gi|311273676|ref|XP_003133982.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Sus scrofa]
gi|332254884|ref|XP_003276562.1| PREDICTED: insulin gene enhancer protein ISL-1 [Nomascus
leucogenys]
gi|332821395|ref|XP_001150633.2| PREDICTED: insulin gene enhancer protein ISL-1 isoform 2 [Pan
troglodytes]
gi|344272509|ref|XP_003408074.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Loxodonta
africana]
gi|345799577|ref|XP_853721.2| PREDICTED: insulin gene enhancer protein ISL-1 isoform 1 [Canis
lupus familiaris]
gi|348568904|ref|XP_003470238.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Cavia
porcellus]
gi|354472426|ref|XP_003498440.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Cricetulus
griseus]
gi|395818859|ref|XP_003782831.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Otolemur
garnettii]
gi|397514229|ref|XP_003827396.1| PREDICTED: insulin gene enhancer protein ISL-1 [Pan paniscus]
gi|402871509|ref|XP_003899703.1| PREDICTED: insulin gene enhancer protein ISL-1 [Papio anubis]
gi|403267625|ref|XP_003925922.1| PREDICTED: insulin gene enhancer protein ISL-1 [Saimiri boliviensis
boliviensis]
gi|410949527|ref|XP_003981473.1| PREDICTED: insulin gene enhancer protein ISL-1 [Felis catus]
gi|47606422|sp|P61374.1|ISL1_RAT RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606423|sp|P61371.1|ISL1_HUMAN RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606424|sp|P61372.1|ISL1_MOUSE RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606425|sp|P61373.1|ISL1_MESAU RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|2137056|pir||I67418 transcription factor isl-1 - hamster
gi|4261764|gb|AAD14064.1|S70721_1 homeobox [Homo sapiens]
gi|545787|gb|AAB30128.1| homeobox [Rattus sp.]
gi|4469284|emb|CAB38446.1| Lim-homeodomain protein Islet1 [Mus musculus]
gi|22658390|gb|AAH31213.1| ISL LIM homeobox 1 [Homo sapiens]
gi|30065750|gb|AAP20776.1| Isl-1 [Cricetulus sp.]
gi|119575256|gb|EAW54861.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [Homo
sapiens]
gi|123996141|gb|ABM85672.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [synthetic
construct]
gi|124298178|gb|AAI32264.1| ISL1 transcription factor, LIM/homeodomain [Mus musculus]
gi|124375804|gb|AAI32610.1| ISL1 transcription factor, LIM/homeodomain [Mus musculus]
gi|148686421|gb|EDL18368.1| ISL1 transcription factor, LIM/homeodomain, isoform CRA_b [Mus
musculus]
gi|148877422|gb|AAI46164.1| ISL1 protein [Bos taurus]
gi|149059388|gb|EDM10395.1| ISL1 transcription factor, LIM/homeodomain 1 [Rattus norvegicus]
gi|157928248|gb|ABW03420.1| ISL LIM homeobox 1 [synthetic construct]
gi|261861196|dbj|BAI47120.1| ISL LIM homeobox 1 [synthetic construct]
gi|296475787|tpg|DAA17902.1| TPA: islet-1 [Bos taurus]
gi|351712707|gb|EHB15626.1| Insulin gene enhancer protein ISL-1 [Heterocephalus glaber]
gi|355691298|gb|EHH26483.1| Insulin gene enhancer protein ISL-1 [Macaca mulatta]
gi|226841|prf||1608207A insulin gene enhancer binding protein Isl-1
Length = 349
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 134 --DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
Q + + +P+P ++E L TGLS R++
Sbjct: 192 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 225
>gi|431900754|gb|ELK08195.1| LIM/homeobox protein Lhx6 [Pteropus alecto]
Length = 272
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 22 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 81
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 82 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 141
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 142 QKLADMTGLSRRVIQ 156
>gi|61200414|gb|AAX39779.1| ISL1 transcription factor, partial [Ovis aries]
Length = 243
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 21/155 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 32 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 91
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 92 --DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 149
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
Q + + +P+P ++E L TGLS R+++
Sbjct: 150 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 184
>gi|390458307|ref|XP_002806566.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Callithrix jacchus]
Length = 363
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 130 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 189
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 190 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 249
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 250 QKLADMTGLSRRVIQ 264
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 79 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|301768533|ref|XP_002919684.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Ailuropoda
melanoleuca]
Length = 349
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 134 --DVVERASLGTGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
Q + + +P+P ++E L TGLS R++
Sbjct: 192 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 225
>gi|395510266|ref|XP_003759400.1| PREDICTED: insulin gene enhancer protein ISL-1 isoform 2
[Sarcophilus harrisii]
Length = 354
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 134 --DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
Q + + +P+P ++E L TGLS R++
Sbjct: 192 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 225
>gi|410978995|ref|XP_003995872.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Felis catus]
Length = 363
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 130 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 189
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 190 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 249
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 250 QKLADMTGLSRRVIQ 264
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 79 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|344271981|ref|XP_003407815.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Loxodonta africana]
Length = 392
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 159 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 218
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 219 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 278
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 279 QKLADMTGLSRRVIQ 293
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 108 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|296482369|tpg|DAA24484.1| TPA: LIM homeobox 6 isoform 2 [Bos taurus]
Length = 377
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 156 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 215
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 216 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 275
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 276 QTLQKLADMTGLSRRVIQ 293
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 108 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|281342386|gb|EFB17970.1| hypothetical protein PANDA_008333 [Ailuropoda melanoleuca]
Length = 340
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 65 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 124
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 125 --DVVERASLGTGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 182
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
Q + + +P+P ++E L TGLS R++
Sbjct: 183 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 216
>gi|133892446|ref|NP_001076595.1| LIM/homeobox protein Lhx6 isoform 3 [Mus musculus]
gi|341940899|sp|Q9R1R0.2|LHX6_MOUSE RecName: Full=LIM/homeobox protein Lhx6; Short=LIM homeobox protein
6; AltName: Full=LIM/homeobox protein Lhx6.1
gi|40787713|gb|AAH65077.1| Lhx6 protein [Mus musculus]
Length = 363
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 130 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 189
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 190 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 249
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 250 QKLADMTGLSRRVIQ 264
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK +++C+ DY
Sbjct: 79 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 123
>gi|5738958|dbj|BAA83422.1| LIM-homeodomain (LHX) protein 6.1a [Homo sapiens]
Length = 363
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 130 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 189
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 190 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 249
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 250 QKLADMTGLSRRVIQ 264
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 79 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|28569978|dbj|BAC57891.1| transcription factor islet-1 isoform beta [Mus musculus]
gi|148686420|gb|EDL18367.1| ISL1 transcription factor, LIM/homeodomain, isoform CRA_a [Mus
musculus]
Length = 326
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 21/155 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 134 --DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
Q + + +P+P ++E L TGLS R+++
Sbjct: 192 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|348570158|ref|XP_003470864.1| PREDICTED: LIM/homeobox protein Lhx6-like [Cavia porcellus]
Length = 363
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 130 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 189
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 190 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 249
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 250 QKLADMTGLSRRVIQ 264
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 79 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|344284256|ref|XP_003413884.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein
ISL-2-like [Loxodonta africana]
Length = 356
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C +LVM+ D+V+H++CF C VC +L G++F +++ +L CR D+ +
Sbjct: 85 KCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADHGLLL 144
Query: 66 EMLQGYAQGIPFDLITSSKSH-----DGRRGPKRP------------RTILTTQQRRAFK 108
E + P L + H GR+ RP RT+L +Q +
Sbjct: 145 ERAAAGSPRSPGPLPGARGLHLPDPGAGRQPSLRPHVHKQTEKTTRVRTVLNEKQLHTLR 204
Query: 109 ASFEISPKPCRKVREGLARDTGLSVRIV 136
+ +P+P ++E L TGLS R++
Sbjct: 205 TCYAANPRPDALMKEQLVEMTGLSPRVI 232
>gi|126315044|ref|XP_001365199.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Monodelphis
domestica]
gi|395510264|ref|XP_003759399.1| PREDICTED: insulin gene enhancer protein ISL-1 isoform 1
[Sarcophilus harrisii]
Length = 349
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 134 --DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
Q + + +P+P ++E L TGLS R++
Sbjct: 192 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 225
>gi|390458311|ref|XP_003732089.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Callithrix jacchus]
Length = 381
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 148 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 207
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 208 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 267
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 268 QKLADMTGLSRRVIQ 282
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 97 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|344271983|ref|XP_003407816.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Loxodonta africana]
Length = 377
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 156 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 215
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 216 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 275
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 276 QTLQKLADMTGLSRRVIQ 293
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 108 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|57613|emb|CAA37349.1| insulin gene enhancer binding protein [Rattus rattus]
Length = 313
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 21/155 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 71 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 130
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 131 --DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 188
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
Q + + +P+P ++E L TGLS R+++
Sbjct: 189 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 223
>gi|344241263|gb|EGV97366.1| LIM/homeobox protein Lhx6 [Cricetulus griseus]
Length = 363
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 130 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 189
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 190 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 249
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 250 QKLADMTGLSRRVIQ 264
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK +++C+ DY
Sbjct: 79 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 123
>gi|300797193|ref|NP_001179777.1| LIM/homeobox protein Lhx6 [Bos taurus]
gi|296482368|tpg|DAA24483.1| TPA: LIM homeobox 6 isoform 1 [Bos taurus]
Length = 392
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 159 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 218
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 219 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 278
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 279 QKLADMTGLSRRVIQ 293
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 108 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|440906624|gb|ELR56864.1| LIM/homeobox protein Lhx6, partial [Bos grunniens mutus]
Length = 360
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 129 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 188
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 189 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 248
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 249 QTLQKLADMTGLSRRVIQ 266
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 81 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 125
>gi|345806127|ref|XP_548475.3| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Canis lupus
familiaris]
Length = 363
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 130 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 189
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 190 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 249
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 250 QKLADMTGLSRRVIQ 264
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 79 DRDLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|334191691|ref|NP_001229263.1| LIM/homeobox protein Lhx6 isoform 4 [Homo sapiens]
gi|90185239|sp|Q9UPM6.2|LHX6_HUMAN RecName: Full=LIM/homeobox protein Lhx6; Short=LIM homeobox protein
6; AltName: Full=LIM/homeobox protein Lhx6.1
gi|7018428|emb|CAB66505.1| hypothetical protein [Homo sapiens]
gi|74353529|gb|AAI03938.1| LIM homeobox 6 [Homo sapiens]
gi|117646920|emb|CAL37575.1| hypothetical protein [synthetic construct]
gi|119607922|gb|EAW87516.1| LIM homeobox 6, isoform CRA_b [Homo sapiens]
gi|119607923|gb|EAW87517.1| LIM homeobox 6, isoform CRA_b [Homo sapiens]
gi|158260677|dbj|BAF82516.1| unnamed protein product [Homo sapiens]
gi|189054037|dbj|BAG36544.1| unnamed protein product [Homo sapiens]
Length = 363
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 130 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 189
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 190 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 249
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 250 QKLADMTGLSRRVIQ 264
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 79 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|354500655|ref|XP_003512414.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Cricetulus griseus]
Length = 366
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 148 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 207
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 208 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 267
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 268 QKLADMTGLSRRVIQ 282
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK +++C+ DY
Sbjct: 97 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 141
>gi|402896489|ref|XP_003911330.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx6 [Papio
anubis]
Length = 390
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 159 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 218
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 219 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 278
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 279 QKLADMTGLSRRVIQ 293
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 108 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|134284359|ref|NP_055183.2| LIM/homeobox protein Lhx6 isoform 1 [Homo sapiens]
gi|297685270|ref|XP_002820218.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Pongo abelii]
gi|221042862|dbj|BAH13108.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 159 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 218
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 219 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 278
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 279 QKLADMTGLSRRVIQ 293
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 108 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|133891794|ref|NP_032526.2| LIM/homeobox protein Lhx6 isoform 1 [Mus musculus]
Length = 392
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 159 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 218
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 219 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 278
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 279 QKLADMTGLSRRVIQ 293
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK +++C+ DY
Sbjct: 108 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 152
>gi|390458313|ref|XP_003732090.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 4 [Callithrix jacchus]
Length = 366
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 145 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 204
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 205 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 264
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 265 QTLQKLADMTGLSRRVIQ 282
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 97 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|410043123|ref|XP_003312314.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Pan troglodytes]
Length = 348
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 127 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 186
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 187 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 246
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 247 QTLQKLADMTGLSRRVIQ 264
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 79 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|344271985|ref|XP_003407817.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Loxodonta africana]
Length = 366
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 145 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 204
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 205 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 264
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 265 QTLQKLADMTGLSRRVIQ 282
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 97 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|281337700|gb|EFB13284.1| hypothetical protein PANDA_004030 [Ailuropoda melanoleuca]
Length = 360
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 132 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 191
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 192 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 251
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 252 QKLADMTGLSRRVIQ 266
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 81 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 125
>gi|167773589|gb|ABZ92229.1| LIM homeobox 6 [synthetic construct]
Length = 363
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 130 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 189
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 190 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 249
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 250 QKLADMTGLSRRVIQ 264
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 79 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|149038911|gb|EDL93131.1| LIM homeobox protein 6 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 373
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 155 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 214
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 215 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 274
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 275 QKLADMTGLSRRVIQ 289
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK +++C+ DY
Sbjct: 104 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 148
>gi|403266045|ref|XP_003925208.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 366
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 145 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 204
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 205 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 264
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 265 QTLQKLADMTGLSRRVIQ 282
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 97 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|403266043|ref|XP_003925207.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 381
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 145 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 204
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 205 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 264
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 265 QTLQKLADMTGLSRRVIQ 282
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 97 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|354500651|ref|XP_003512412.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Cricetulus griseus]
Length = 392
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 159 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 218
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 219 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 278
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 279 QKLADMTGLSRRVIQ 293
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK +++C+ DY
Sbjct: 108 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 152
>gi|332832786|ref|XP_001135172.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Pan troglodytes]
Length = 392
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 159 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 218
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 219 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 278
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 279 QKLADMTGLSRRVIQ 293
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 108 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|297270222|ref|XP_001089041.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Macaca mulatta]
Length = 392
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 159 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 218
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 219 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 278
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 279 QKLADMTGLSRRVIQ 293
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 108 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|117645548|emb|CAL38240.1| hypothetical protein [synthetic construct]
Length = 363
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 130 KCARCGRQIYASDWVRRARGNAYHLACFTCFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 189
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 190 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 249
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 250 QKLADMTGLSRRVIQ 264
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 79 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|297270226|ref|XP_002800034.1| PREDICTED: LIM/homeobox protein Lhx6 [Macaca mulatta]
Length = 366
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 145 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 204
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 205 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 264
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 265 QTLQKLADMTGLSRRVIQ 282
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 97 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|157821727|ref|NP_001101307.1| LIM/homeobox protein Lhx6 [Rattus norvegicus]
gi|149038910|gb|EDL93130.1| LIM homeobox protein 6 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 388
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 155 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 214
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 215 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 274
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 275 QKLADMTGLSRRVIQ 289
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK +++C+ DY
Sbjct: 104 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 148
>gi|149041730|gb|EDL95571.1| insulin related protein 2 (islet 2) [Rattus norvegicus]
Length = 359
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 17/152 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ D+V+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 84 LFGIKCAQCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLI---------------TSSKSHDGRRGPK--RPRTILTTQQR 104
+E + P L +S ++H ++ K R RT+L +Q
Sbjct: 144 GLLLERAAAGSPRSPGPLPGARGLHLPDAGSGRQSSLRTHVHKQAEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
+ + +P+P ++E L TGLS R++
Sbjct: 204 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 235
>gi|148676723|gb|EDL08670.1| LIM homeobox protein 6, isoform CRA_d [Mus musculus]
Length = 388
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 155 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 214
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 215 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 274
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 275 QKLADMTGLSRRVIQ 289
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK +++C+ DY
Sbjct: 104 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 148
>gi|133893073|ref|NP_001076594.1| LIM/homeobox protein Lhx6 isoform 2 [Mus musculus]
Length = 377
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 156 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 215
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 216 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 275
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 276 QTLQKLADMTGLSRRVIQ 293
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK +++C+ DY
Sbjct: 108 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 152
>gi|74355622|gb|AAI03937.1| LIM homeobox 6 [Homo sapiens]
gi|119607921|gb|EAW87515.1| LIM homeobox 6, isoform CRA_a [Homo sapiens]
Length = 348
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 127 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 186
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 187 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 246
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 247 QTLQKLADMTGLSRRVIQ 264
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 79 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|334191689|ref|NP_001229262.1| LIM/homeobox protein Lhx6 isoform 3 [Homo sapiens]
gi|221041678|dbj|BAH12516.1| unnamed protein product [Homo sapiens]
Length = 366
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 145 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 204
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 205 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 264
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 265 QTLQKLADMTGLSRRVIQ 282
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 97 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|390458309|ref|XP_003732088.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Callithrix jacchus]
Length = 348
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 130 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 189
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 190 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 249
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 250 QKLADMTGLSRRVIQ 264
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 79 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|301760410|ref|XP_002916006.1| PREDICTED: LIM/homeobox protein Lhx6-like [Ailuropoda melanoleuca]
Length = 390
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 154 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 213
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 214 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 273
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 274 QTLQKLADMTGLSRRVIQ 291
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 106 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 150
>gi|5738960|dbj|BAA83423.1| LIM-homeodomain (LHX) protein 6.1b [Homo sapiens]
Length = 348
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 127 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 186
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 187 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 246
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 247 QTLQKLADMTGLSRRVIQ 264
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 79 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|345806125|ref|XP_003435390.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Canis lupus
familiaris]
Length = 392
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 159 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 218
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 219 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 278
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 279 QKLADMTGLSRRVIQ 293
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 108 DRDLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|395824115|ref|XP_003785316.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Otolemur garnettii]
Length = 392
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 159 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 218
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 219 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 278
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 279 QKLADMTGLSRRVIQ 293
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 108 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|354500653|ref|XP_003512413.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Cricetulus griseus]
Length = 377
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 159 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 218
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 219 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 278
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 279 QKLADMTGLSRRVIQ 293
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK +++C+ DY
Sbjct: 108 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 152
>gi|397526998|ref|XP_003833397.1| PREDICTED: LIM/homeobox protein Lhx6 [Pan paniscus]
Length = 377
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 141 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 200
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 201 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 260
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 261 QTLQKLADMTGLSRRVIQ 278
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 93 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 137
>gi|395824119|ref|XP_003785318.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Otolemur garnettii]
Length = 366
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 145 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 204
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 205 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 264
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 265 QTLQKLADMTGLSRRVIQ 282
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 97 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|395824117|ref|XP_003785317.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Otolemur garnettii]
Length = 377
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 156 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 215
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 216 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 275
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 276 QTLQKLADMTGLSRRVIQ 293
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 108 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|134284361|ref|NP_954629.2| LIM/homeobox protein Lhx6 isoform 2 [Homo sapiens]
gi|297685272|ref|XP_002820219.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Pongo abelii]
Length = 377
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 156 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 215
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 216 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 275
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 276 QTLQKLADMTGLSRRVIQ 293
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 108 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|297685274|ref|XP_002820220.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Pongo abelii]
Length = 366
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 145 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 204
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 205 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 264
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 265 QTLQKLADMTGLSRRVIQ 282
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 97 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|410043125|ref|XP_003951564.1| PREDICTED: LIM/homeobox protein Lhx6 [Pan troglodytes]
Length = 366
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 145 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 204
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 205 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 264
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 265 QTLQKLADMTGLSRRVIQ 282
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 97 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|297270224|ref|XP_001088818.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Macaca mulatta]
Length = 377
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 156 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 215
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 216 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 275
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 276 QTLQKLADMTGLSRRVIQ 293
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 108 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|209737368|gb|ACI69553.1| Insulin gene enhancer protein isl-1 [Salmo salar]
Length = 356
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC C+ ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGI-------PFDLITSSKS----------HDGRRGPKRPRTILTTQQR 104
+ G + P + S H R RT+L +Q
Sbjct: 134 DVVERATMGSGDPLSPLHPARPLQMAADPISARQPALRPHVHKQPEKTTRVRTVLNEKQL 193
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
+ + +P+P ++E L TGLS R++
Sbjct: 194 HTLRTCYNANPRPDALMKEQLVEMTGLSPRVI 225
>gi|432915645|ref|XP_004079190.1| PREDICTED: LIM/homeobox protein Lhx8-like [Oryzias latipes]
Length = 314
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + + FH+ CF C C +L GE+ + + ++FCRP Y+
Sbjct: 92 YGTRCARCGRNIHSTDWVRRAKGSTFHLACFSCASCKRQLSTGEECGLFENRVFCRPHYD 151
Query: 63 KEVEML---QGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L + Q P D + +S R KR RT T Q + + F P
Sbjct: 152 VAMENLKRSKENEQPQPEDRSANKESSTVGRPAKRARTSFTVDQLQVMQTQFAKDNNPDA 211
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 212 QTLQKLAEKTGLSRRVIQ 229
>gi|56694834|gb|AAW23079.1| Lmx-b [Oikopleura dioica]
gi|313239052|emb|CBY14034.1| unnamed protein product [Oikopleura dioica]
Length = 419
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 36/47 (76%)
Query: 91 GPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KRPRTIL QRR FK +FE +PKPCRKVRE LA +TGLS R+VQ
Sbjct: 236 AAKRPRTILNQAQRRRFKEAFETTPKPCRKVREKLAEETGLSQRVVQ 282
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVI 50
C C E + + +MKT +VFH CF C +C ++L+ GE++ I
Sbjct: 64 CDACKEVITQGDYIMKTESSVFHWSCFKCTICSTKLESGERYSI 107
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
C C E L E V FH +C C C + L GE+ +K +L+C+ DYE
Sbjct: 5 CFACRESLTAMENVSTISGYTFHNECLNCSNCSAGL--GERCYLKGTKLYCKNDYE 58
>gi|18858905|ref|NP_571037.1| insulin gene enhancer protein isl-1 [Danio rerio]
gi|1708559|sp|P53405.1|ISL1_DANRE RecName: Full=Insulin gene enhancer protein isl-1; Short=Islet-1
gi|497898|dbj|BAA04670.1| insulin gene enhancer binding protein [Danio rerio]
gi|38173895|gb|AAH60892.1| Isl1 protein [Danio rerio]
Length = 349
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC C+ ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGI-------PFDLITSSKS----------HDGRRGPKRPRTILTTQQR 104
+ G + P + S H R RT+L +Q
Sbjct: 134 DVVERATMGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEKQL 193
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
+ + +P+P ++E L TGLS R++
Sbjct: 194 HTLRTCYNANPRPDALMKEQLVEMTGLSPRVI 225
>gi|17945534|gb|AAL48819.1| RE24382p [Drosophila melanogaster]
Length = 275
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C + + V + + VFH+ CF C CG +L GEQF + ++ C+ Y
Sbjct: 65 FGAKCSKCCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHYL 124
Query: 63 KEVE-MLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
+ VE +G D SK+ KR RT T +Q + +A+F+I P +
Sbjct: 125 ETVEGGTTSSDEGCDGDGYHKSKT-------KRVRTTFTEEQLQVLQANFQIDSNPDDQD 177
Query: 122 REGLARDTGLSVRIVQ 137
E +A TGLS R+ Q
Sbjct: 178 LERIASVTGLSKRVTQ 193
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
++ C C E + D ++ +H C C +C L R + I++ Q++C+ DY K
Sbjct: 5 LRSCAACGEPI-SDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSK 63
Query: 64 E 64
Sbjct: 64 N 64
>gi|12851555|dbj|BAB29088.1| unnamed protein product [Mus musculus]
Length = 359
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 17/152 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ D+V+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 84 LFGIKCAQCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLI---------------TSSKSHDGRRGPK--RPRTILTTQQR 104
+E + P L S ++H ++ K R RT+L +Q
Sbjct: 144 GLLLERAAAGSPRTPGPLPGARGLHLPDAGSGRQPSLRTHVDKQAEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
+ + +P+P ++E L TGLS R++
Sbjct: 204 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 235
>gi|45382271|ref|NP_990745.1| insulin gene enhancer protein ISL-1 [Gallus gallus]
gi|1708560|sp|P50211.1|ISL1_CHICK RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|531179|gb|AAA62171.1| amino acid feature: LIM1, bp 331 .. 483; amino acid feature: LIM2,
bp 517 .. 669; amino acid feature: homeodomain, bp 820
.. 999 [Gallus gallus]
Length = 349
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARAKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 134 --DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
Q + + +P+P ++E L TGLS R++
Sbjct: 192 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 225
>gi|432853477|ref|XP_004067726.1| PREDICTED: LIM/homeobox protein Lhx8 [Oryzias latipes]
Length = 338
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y C C + + V + NV+H+ CF C C +L GE+F + +G++ CR Y+
Sbjct: 112 YGTWCACCGRNIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEGKVLCRIHYD 171
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGP-KRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ + G+ + ++ + P KR RT T Q + +A F P
Sbjct: 172 CMLDNLKRAVEKGTGVNMEGAVPTEQEINQPKPSKRARTSFTADQLQVMQAQFAQDNNPD 231
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA +TGLS R++Q
Sbjct: 232 AQTLQKLAEETGLSRRVIQ 250
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C C+E++ D+ ++K D +HV+C C VC + L IK+ ++FC+ DY
Sbjct: 55 CANCNEEI-VDKYLLKVNDLCWHVRCLSCSVCQTSLGSHASCYIKEKEIFCKLDY 108
>gi|224090443|ref|XP_002197098.1| PREDICTED: insulin gene enhancer protein ISL-1 [Taeniopygia
guttata]
Length = 349
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARAKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 E-KEVEMLQGYAQGIPFD----LITSSKSHDGRRGPKRP------------RTILTTQQR 104
+ E L G P L +++ R+ RP RT+L +Q
Sbjct: 134 DVVERASLGGGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEKQL 193
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
+ + +P+P ++E L TGLS R++
Sbjct: 194 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 225
>gi|9994171|ref|NP_065204.1| insulin gene enhancer protein ISL-2 [Rattus norvegicus]
gi|1708563|sp|P50480.1|ISL2_RAT RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|531218|gb|AAA62161.1| amino acid feature: homeodomain, bp 647 .. 826; amino acid feature:
LIM1, bp 155 .. 307; amino acid feature: LIM2, bp 341 ..
493 [Rattus norvegicus]
Length = 360
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 24/156 (15%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ D+V+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 84 LFGIKCAQCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLI-------------------TSSKSHDGRRGPK--RPRTILT 100
+L+ A G P S ++H ++ K R RT+L
Sbjct: 144 GL---LLERAAAGSPRSPGPLPGTPPGLHLPDAGSGQQVSLRTHVHKQAEKTTRVRTVLN 200
Query: 101 TQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
+Q + + +P+P ++E L TGLS R++
Sbjct: 201 EKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 236
>gi|442630036|ref|NP_001261379.1| arrowhead, isoform C [Drosophila melanogaster]
gi|440215263|gb|AGB94074.1| arrowhead, isoform C [Drosophila melanogaster]
Length = 287
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C + + V + + VFH+ CF C CG +L GEQF + ++ C+ Y
Sbjct: 65 FGAKCSKCCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHYL 124
Query: 63 KEVE-MLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
+ VE +G D SK+ KR RT T +Q + +A+F+I P +
Sbjct: 125 ETVEGGTTSSDEGCDGDGYHKSKT-------KRVRTTFTEEQLQVLQANFQIDSNPDGQD 177
Query: 122 REGLARDTGLSVRIVQ 137
E +A TGLS R+ Q
Sbjct: 178 LERIASVTGLSKRVTQ 193
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
++ C C E + D ++ +H C C +C L R + I++ Q++C+ DY K
Sbjct: 5 LRSCAACGEPI-SDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSK 63
Query: 64 E 64
Sbjct: 64 N 64
>gi|24656992|ref|NP_728906.1| arrowhead, isoform B [Drosophila melanogaster]
gi|194866170|ref|XP_001971791.1| GG15164 [Drosophila erecta]
gi|195491511|ref|XP_002093592.1| GE21383 [Drosophila yakuba]
gi|62510367|sp|Q8IRC7.1|AWH_DROME RecName: Full=LIM/homeobox protein Awh; AltName: Full=Protein
arrowhead
gi|23092944|gb|AAN11572.1| arrowhead, isoform B [Drosophila melanogaster]
gi|94400621|gb|ABF17921.1| FI01007p [Drosophila melanogaster]
gi|190653574|gb|EDV50817.1| GG15164 [Drosophila erecta]
gi|194179693|gb|EDW93304.1| GE21383 [Drosophila yakuba]
Length = 275
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C + + V + + VFH+ CF C CG +L GEQF + ++ C+ Y
Sbjct: 65 FGAKCSKCCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHYL 124
Query: 63 KEVE-MLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
+ VE +G D SK+ KR RT T +Q + +A+F+I P +
Sbjct: 125 ETVEGGTTSSDEGCDGDGYHKSKT-------KRVRTTFTEEQLQVLQANFQIDSNPDGQD 177
Query: 122 REGLARDTGLSVRIVQ 137
E +A TGLS R+ Q
Sbjct: 178 LERIASVTGLSKRVTQ 193
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
++ C C E + D ++ +H C C +C L R + I++ Q++C+ DY K
Sbjct: 5 LRSCAACGEPI-SDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSK 63
Query: 64 E 64
Sbjct: 64 N 64
>gi|405973461|gb|EKC38176.1| LIM/homeobox protein Awh [Crassostrea gigas]
Length = 278
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C + + V + +NV+H+ CF C C +L GE+F + ++ C+ Y +
Sbjct: 105 KCAKCYRTIQSTDWVRRARENVYHLACFACDSCKRQLSTGEEFALHGDRVLCKSHY---M 161
Query: 66 EMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGL 125
E+L+G G D S KS KR RT T Q + +A+F++ P + E +
Sbjct: 162 ELLEG---GSSKDSECSQKS-----KAKRVRTTFTEDQLQVLQANFQLDSNPDGQDLERI 213
Query: 126 ARDTGLSVRIVQ 137
A+ TGLS R+ Q
Sbjct: 214 AQITGLSKRVTQ 225
>gi|380690603|gb|AFD93370.1| apterous, partial [Cydia pomonella]
Length = 231
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 77/196 (39%), Gaps = 59/196 (30%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
M VK+C C + +ELVM+ D V+H+ CF C CGS L +G+ F ++ ++CRP
Sbjct: 35 MFCVKRCARCGAGITANELVMRARDAVYHLTCFSCAACGSLLSKGDVFGMRDNLVYCRPH 94
Query: 61 YEKEVEMLQGY------AQGIPF------------------------------------- 77
YE+E + Y ++G P
Sbjct: 95 YEQEYDDDSVYRCQEMDSEGSPSQFYGGPSQKGRPRKRKLAQSPDDMQVQTMRMASTALE 154
Query: 78 -----DLITSSKSHDGRRGPKRP-----------RTILTTQQRRAFKASFEISPKPCRKV 121
DL +S +S G P RT Q R K+ F ++ P K
Sbjct: 155 ILHRGDLSSSMESLAYDSGAASPGSVSSTRTKRMRTSFKHHQLRTMKSYFAVNQNPDAKD 214
Query: 122 REGLARDTGLSVRIVQ 137
+ LA+ TGLS R++Q
Sbjct: 215 LKQLAQKTGLSKRVLQ 230
>gi|395822580|ref|XP_003784594.1| PREDICTED: insulin gene enhancer protein ISL-2 [Otolemur garnettii]
Length = 359
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ D+V+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 84 LFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSH-----DGRRGPKRP------------RTILTTQQR 104
+E + P L + H R+ RP RT+L +Q
Sbjct: 144 GLLLERAAAGSPRSPGQLPGARGLHLPDPGSARQPSLRPHVHKQTEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
+ + +P+P ++E L TGLS R++
Sbjct: 204 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 235
>gi|195337236|ref|XP_002035235.1| GM14592 [Drosophila sechellia]
gi|194128328|gb|EDW50371.1| GM14592 [Drosophila sechellia]
Length = 275
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C + + V + + VFH+ CF C CG +L GEQF + ++ C+ Y
Sbjct: 65 FGAKCSKCCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHYL 124
Query: 63 KEVE-MLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
+ VE +G D SK+ KR RT T +Q + +A+F+I P +
Sbjct: 125 ETVEGGTTSSDEGCDGDGYHKSKT-------KRVRTTFTEEQLQVLQANFQIDSNPDGQD 177
Query: 122 REGLARDTGLSVRIVQ 137
E +A TGLS R+ Q
Sbjct: 178 LERIASVTGLSKRVTQ 193
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
++ C C E + D ++ +H C C +C L R + I++ Q++C+ DY K
Sbjct: 5 LRSCAACGEPI-SDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSK 63
Query: 64 E 64
Sbjct: 64 N 64
>gi|410978997|ref|XP_003995873.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Felis catus]
Length = 404
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 145 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 204
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 205 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 264
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 265 QTLQKLADMTGLSRRVIQ 282
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 97 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|291240697|ref|XP_002740254.1| PREDICTED: LIM class homeodomain transcription factor, Lhx6/8
subclass-like [Saccoglossus kowalevskii]
Length = 283
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 6/141 (4%)
Query: 1 MLYVK----KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLF 56
M Y++ KC C + ++ V K ++V+H+ CF C C +L GE+F +++ ++
Sbjct: 73 MDYIRQFGTKCSRCMRNIQSNDWVRKAKNHVYHLACFACDNCKRQLSTGEEFAMQENKVL 132
Query: 57 CRPDYEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPK 116
C+ Y + +E ++ L H+ R KR RT T +Q + +A+F +
Sbjct: 133 CKTHYLELLENSSDCSETKEGMLQNGHSRHNPR--TKRVRTTFTEEQLQVLQANFNVDSN 190
Query: 117 PCRKVREGLARDTGLSVRIVQ 137
P + E +A+ TGLS R+ Q
Sbjct: 191 PDGQDLERIAQITGLSKRVTQ 211
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
CLGC+ + D ++K +HV+C C +C + L + K ++C+ DY
Sbjct: 22 CLGCTSPI-QDRYLLKVGTRSWHVRCLRCCICQTGLGGQQSCFTKDDNIYCKMDY 75
>gi|442630038|ref|NP_001261380.1| arrowhead, isoform D [Drosophila melanogaster]
gi|440215264|gb|AGB94075.1| arrowhead, isoform D [Drosophila melanogaster]
Length = 271
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C + + V + + VFH+ CF C CG +L GEQF + ++ C+ Y
Sbjct: 65 FGAKCSKCCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHYL 124
Query: 63 KEVE-MLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
+ VE +G D SK+ KR RT T +Q + +A+F+I P +
Sbjct: 125 ETVEGGTTSSDEGCDGDGYHKSKT-------KRVRTTFTEEQLQVLQANFQIDSNPDGQD 177
Query: 122 REGLARDTGLSVRIVQ 137
E +A TGLS R+ Q
Sbjct: 178 LERIASVTGLSKRVTQ 193
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
++ C C E + D ++ +H C C +C L R + I++ Q++C+ DY K
Sbjct: 5 LRSCAACGEPI-SDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSK 63
Query: 64 E 64
Sbjct: 64 N 64
>gi|355749907|gb|EHH54245.1| Insulin gene enhancer protein ISL-1 [Macaca fascicularis]
Length = 349
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGIPFDLITSSKS-------------------HDGRRGPKRPRTILTTQ 102
+V G P + ++ H R RT+L +
Sbjct: 134 --DVVERASLGAGDPLSPLHPARPLQMAGTPLPGSXXXLRPHVHKQPEKTTRVRTVLNEK 191
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
Q + + +P+P ++E L TGLS R+++
Sbjct: 192 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|5738954|dbj|BAA83420.1| LIM-homeodomain (LHX) protein 6.1b [Mus musculus]
Length = 348
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 130 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 189
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 190 ENLKKAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 249
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TG S R++Q
Sbjct: 250 QKLADMTGFSRRVIQ 264
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK +++C+ DY
Sbjct: 79 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 123
>gi|5738956|dbj|BAA83421.1| LIM-homeodomain (LHX) protein 6.1a [Mus musculus]
Length = 363
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 130 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 189
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 190 ENLKKAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 249
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TG S R++Q
Sbjct: 250 QKLADMTGFSRRVIQ 264
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK +++C+ DY
Sbjct: 79 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 123
>gi|348539204|ref|XP_003457079.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 1
[Oreochromis niloticus]
Length = 349
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 21/155 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC C+ ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 134 --DVVERASLGPGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
Q + + +P+P ++E L TGLS R+++
Sbjct: 192 QLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|328925124|dbj|BAK19077.1| apterous B alpha [Bombyx mori]
Length = 349
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
VK+C C + +ELVM+ D V+H+ CF CV CG++L +G+ F +K G ++CRP Y+
Sbjct: 77 VKRCGRCCNGITANELVMRARDLVYHLNCFTCVACGTQLSKGDVFGMKGGLVYCRPHYDT 136
Query: 64 -------EVEMLQGYAQGIPFDLITSSKSHDGRRGPK-RPR 96
+ EM GY + S + + G PK RPR
Sbjct: 137 ACLDDYCDEEMTNGYRCQDMHNGGNSPQYYSGGSTPKGRPR 177
>gi|348539206|ref|XP_003457080.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 2
[Oreochromis niloticus]
Length = 357
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 21/155 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC C+ ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 134 --DVVERASLGPGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
Q + + +P+P ++E L TGLS R+++
Sbjct: 192 QLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|110748616|gb|ABG89861.1| Lhx6, partial [Astyanax mexicanus]
Length = 303
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 3/134 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ V
Sbjct: 170 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMV 229
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 230 ENLKRAAESGSGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 289
Query: 123 EGLARDTGLSVRIV 136
+ LA TGLS R++
Sbjct: 290 QKLADMTGLSRRVI 303
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++H +C C VC + L++ IK ++FC+ DY
Sbjct: 119 DRYLLKVNNLIWHXRCLECSVCRTSLRQHSSCYIKNKEIFCKMDY 163
>gi|312385468|gb|EFR29960.1| hypothetical protein AND_00755 [Anopheles darlingi]
Length = 339
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 9/139 (6%)
Query: 3 YVKK----CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCR 58
Y+KK C C+ + + V + + VFH+ CF C CG +L GEQF I + ++ C+
Sbjct: 127 YIKKFKTSCAKCARSISATDWVRRAREYVFHLACFACDSCGRQLSTGEQFAICEDRVLCK 186
Query: 59 PDYEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
Y + ++ ++ D + S G + KR RT T +Q + +A+F+I P
Sbjct: 187 THYMELIDDGTTSSE----DGCDADGSGKGSK-TKRIRTTFTEEQIQILQANFQIDSNPD 241
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ E +A TGLS R+ Q
Sbjct: 242 GQDLERIALATGLSKRVTQ 260
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
K C GCSE++ D + + +H C C VC L+R ++ G ++C+ DY K+
Sbjct: 72 KACGGCSEQI-TDRYIFEVNGASWHGSCLRCSVCYCPLERQASCFLRDGDVYCKADYIKK 130
>gi|154146254|ref|NP_081673.2| insulin gene enhancer protein ISL-2 [Mus musculus]
gi|408360153|sp|Q9CXV0.2|ISL2_MOUSE RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|148693907|gb|EDL25854.1| insulin related protein 2 (islet 2) [Mus musculus]
gi|183396835|gb|AAI65972.1| Insulin related protein 2 (islet 2) [synthetic construct]
Length = 359
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 17/152 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ D+V+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 84 LFGIKCAQCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLI---------------TSSKSHDGRRGPK--RPRTILTTQQR 104
+E + P L S ++H ++ K R RT+L +Q
Sbjct: 144 GLLLERAAAGSPRSPGPLPGARGLHLPDAGSGRQPSLRTHVHKQAEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
+ + +P+P ++E L TGLS R++
Sbjct: 204 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 235
>gi|24656997|ref|NP_523907.2| arrowhead, isoform A [Drosophila melanogaster]
gi|23092945|gb|AAF47800.2| arrowhead, isoform A [Drosophila melanogaster]
Length = 214
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C + + V + + VFH+ CF C CG +L GEQF + ++ C+ Y
Sbjct: 65 FGAKCSKCCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHYL 124
Query: 63 KEVE-MLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
+ VE +G D SK+ KR RT T +Q + +A+F+I P +
Sbjct: 125 ETVEGGTTSSDEGCDGDGYHKSKT-------KRVRTTFTEEQLQVLQANFQIDSNPDGQD 177
Query: 122 REGLARDTGLSVRIVQ 137
E +A TGLS R+ Q
Sbjct: 178 LERIASVTGLSKRVTQ 193
>gi|327262855|ref|XP_003216239.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Anolis
carolinensis]
Length = 349
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC C+ ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 134 --DVVERASLGPGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
Q + + +P+P ++E L TGLS R++
Sbjct: 192 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 225
>gi|194223906|ref|XP_001916580.1| PREDICTED: insulin gene enhancer protein ISL-1 [Equus caballus]
Length = 349
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 21/154 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCR--A 131
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
E +V G P L +++ R+ RP RT+L +
Sbjct: 132 EHDVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
Q + + +P+P ++E L TGLS R++
Sbjct: 192 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 225
>gi|449477358|ref|XP_004176635.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5
[Taeniopygia guttata]
Length = 328
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 27/161 (16%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY-EKEV 65
C GC + D ++ LD +H++C C C L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGCERPIL-DRFLLNVLDRAWHIKCVQCCECKCNLT--EKCFSREGKLYCKNDFFQYRS 61
Query: 66 EMLQGYAQGIPFDL--------------------ITSSKSHDGRRGPKR--PRTILTTQQ 103
+ + + DL T++++ + G KR PRT + +Q
Sbjct: 62 RVSSCTDRSLSPDLQDPMQDDTKETDNSTSSDKETTNNENEEQNSGTKRRGPRTTIKAKQ 121
Query: 104 RRAFKASFEISPKPCRKVREGLARDTGLSVRIVQS-RPIPV 143
KA+F +PKP R +RE LA++TGL++R++QS PIP
Sbjct: 122 LETLKAAFAATPKPTRHIREQLAQETGLNMRVIQSYTPIPA 162
>gi|350579610|ref|XP_003480648.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx6-like [Sus
scrofa]
Length = 332
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 156 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 215
Query: 63 KEVEMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+E L+ A+ G+ + S+ + KR RT T +Q + +A F P
Sbjct: 216 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQVNNPDA 275
Query: 120 KVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 276 QTLQKLADMTGLSRRVLQ 293
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 108 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|50253600|gb|AAT72002.1| isl1, partial [Xenopus (Silurana) tropicalis]
Length = 268
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC C+ ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGI-------PFDLITSSKS----------HDGRRGPKRPRTILTTQQR 104
+ G + + P + S H R RT+L +Q
Sbjct: 134 DVVERASLGASDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEKQL 193
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 194 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|348505012|ref|XP_003440055.1| PREDICTED: LIM/homeobox protein Lhx8-like [Oreochromis niloticus]
Length = 338
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y C C + + V + NV+H+ CF C C +L GE+F + +G++ CR Y+
Sbjct: 112 YGTWCACCGRNIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEGKVLCRVHYD 171
Query: 63 KEVEMLQ-GYAQGIPFDL---ITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ +G ++ + + + + + KR RT T Q + +A F P
Sbjct: 172 CMLDNLKRAVEKGNSVNMEGAVPTEQEINQPKPSKRARTSFTADQLQVMQAQFAQDNNPD 231
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 232 AQTLQKLAEQTGLSRRVIQ 250
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C C+E++ D+ ++K D +HV+C C VC + L IK+ ++FC+ DY
Sbjct: 55 CASCNEEI-VDKYLLKVNDLCWHVRCLSCSVCQTSLGSHTSCYIKEKEVFCKLDY 108
>gi|339236177|ref|XP_003379643.1| LIM/homeobox protein Awh [Trichinella spiralis]
gi|316977684|gb|EFV60755.1| LIM/homeobox protein Awh [Trichinella spiralis]
Length = 902
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 14/132 (10%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C++ + + V + V+H+ CF C C +L GE+F ++ ++ C+ Y +
Sbjct: 683 KCDRCNQVIQSNHWVRRARQYVYHLACFACDSCQRQLSTGEEFALQDSRVLCKQHY---M 739
Query: 66 EMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGL 125
E+L+G + K H ++ KR RT T +Q + +A+F+I P + E +
Sbjct: 740 ELLEG----------DNGKVHH-KQKTKRVRTTFTEEQLQILQANFQIDSNPDGQDLERI 788
Query: 126 ARDTGLSVRIVQ 137
A+ TGLS R+ Q
Sbjct: 789 AQGTGLSKRVTQ 800
>gi|156364672|ref|XP_001626470.1| predicted protein [Nematostella vectensis]
gi|156213347|gb|EDO34370.1| predicted protein [Nematostella vectensis]
Length = 304
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 6/138 (4%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C + ++ V + + V+H+ CF C C +L GE+F +K G + C+ Y + +
Sbjct: 88 KCARCGRSIHANDWVRRAKNCVYHLACFACDNCKRQLSTGEEFALKDGHVLCKLHYLEAL 147
Query: 66 EML---QGYAQGIPFDLITSSKSH---DGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+ + Y + D+ + GR KR RT T Q + +A+F I P
Sbjct: 148 DTSPAERDYQEVFSPDVDGDDSPNSLKSGRHKAKRVRTTFTEDQLQILQANFNIDSNPDG 207
Query: 120 KVREGLARDTGLSVRIVQ 137
+ E +A+ TGLS R+ Q
Sbjct: 208 QDLERIAQLTGLSKRVTQ 225
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
++C+GC K+ D ++K +H +C C +C L R K G+++C+ DY ++
Sbjct: 26 ERCVGCEAKI-VDRYLVKVSGRAWHTKCLKCCLCSDELGREATCYTKDGKIYCKADYARQ 84
>gi|183985542|gb|AAI66037.1| isl1 protein [Xenopus (Silurana) tropicalis]
Length = 335
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC C+ ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGI-------PFDLITSSKS----------HDGRRGPKRPRTILTTQQR 104
+ G + + P + S H R RT+L +Q
Sbjct: 134 DVVERASLGASDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEKQL 193
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 194 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|160420135|ref|NP_001104188.1| ISL LIM homeobox 1 [Xenopus laevis]
gi|115528275|gb|AAI24895.1| LOC100126604 protein [Xenopus laevis]
gi|144952770|gb|ABP04039.1| islet-1 [Xenopus laevis]
gi|213626865|gb|AAI70282.1| Islet-1 [Xenopus laevis]
Length = 354
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC C+ ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 E-------KEVEMLQGYAQGIPFDLITS----------SKSHDGRRGPKRPRTILTTQQR 104
+ + L G P + H R RT+L +Q
Sbjct: 134 DVVERASLGGSDPLSPLHPGRPLQMAAEPICARQPALRPHVHKQPEKTTRVRTVLNEKQL 193
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 194 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|193575711|ref|XP_001949543.1| PREDICTED: LIM/homeobox protein Lhx2-like [Acyrthosiphon pisum]
Length = 356
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ +K+C C +G +LVM+ D V+HV+CF C CG+ L +G+ + ++ G +FCRPD
Sbjct: 79 LFSIKRCARCQGGIGACDLVMRAKDLVYHVECFACYACGAVLCKGDYYGVRDGAVFCRPD 138
Query: 61 YEK 63
YE+
Sbjct: 139 YER 141
>gi|94039292|dbj|BAE93505.1| LIM homeobox protein 4 [Bos taurus]
Length = 181
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 38 CGSRLQRGEQF-VIKQGQLFCRPDYEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPR 96
C +L G++F +++ G+L C+ DYE T+ ++ D G KRPR
Sbjct: 1 CNRQLATGDEFYLMEDGRLVCKEDYE------------------TAKQNDDSEAGAKRPR 42
Query: 97 TILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
T +T +Q K +++ SPKP R VRE L+ +TGL +R+VQ
Sbjct: 43 TTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQ 83
>gi|242023959|ref|XP_002432398.1| Ultrabithorax, putative [Pediculus humanus corporis]
gi|212517821|gb|EEB19660.1| Ultrabithorax, putative [Pediculus humanus corporis]
Length = 305
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
M +K+C C + ELVM+ D VFHV CF C VC S L +G+ F ++ G ++CR
Sbjct: 1 MFVMKRCARCQAAISSSELVMRARDFVFHVHCFTCTVCNSTLTKGDHFGLRDGAIYCRTH 60
Query: 61 YE 62
Y+
Sbjct: 61 YD 62
>gi|307209962|gb|EFN86739.1| Insulin gene enhancer protein ISL-1 [Harpegnathos saltator]
Length = 407
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 78/182 (42%), Gaps = 50/182 (27%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC CS+ ++ VM+ ++HV+CF C C RL+ G++F ++Q LFCR D+
Sbjct: 62 LFGTKCDKCSQCFSKNDYVMRAKTKIYHVECFRCCACMRRLETGDEFALRQDGLFCRHDH 121
Query: 62 EKEVEMLQG-----YAQGIP------------------------FDLITSSKSHDGRRG- 91
++L+G A GIP D + S SH G
Sbjct: 122 ----DVLEGGKHCTGATGIPGSENNNNASLTNNNHHLHPNDGSMSDSGSESGSHKAGVGG 177
Query: 92 ----------------PKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRI 135
P R RT+L +Q + + +P+P ++E L TGLS R+
Sbjct: 178 VRGSGSHKSGGGSDGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRV 237
Query: 136 VQ 137
++
Sbjct: 238 IR 239
>gi|432861700|ref|XP_004069695.1| PREDICTED: insulin gene enhancer protein isl-2a-like [Oryzias
latipes]
Length = 358
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 24/156 (15%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C+ +LVM+ + V+H++CF C VC L G++F +++ +L CR ++
Sbjct: 84 LFGIKCAKCNTGFCSSDLVMRAREKVYHMECFRCSVCSRHLLPGDEFSLREDELLCRANH 143
Query: 62 EKEVEMLQGYAQGIPF-------------DLI-----TSSKSHDGRRGPK--RPRTILTT 101
++L+ + G P D I + ++H ++ K R RT+L
Sbjct: 144 ----DLLERASAGSPLSPDNLHKRTLHISDPISVRHPSHHRNHVHKQSEKTTRVRTVLNE 199
Query: 102 QQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+Q + + +P+P ++E L TGLS R+++
Sbjct: 200 KQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 235
>gi|307184076|gb|EFN70611.1| Insulin gene enhancer protein ISL-1 [Camponotus floridanus]
Length = 408
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 78/182 (42%), Gaps = 50/182 (27%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC CS+ ++ VM+ ++HV+CF C C RL+ G++F ++Q LFCR D+
Sbjct: 62 LFGTKCDKCSQCFSKNDYVMRAKTKIYHVECFRCCACMRRLETGDEFALRQDGLFCRHDH 121
Query: 62 EKEVEMLQG-----YAQGIP------------------------FDLITSSKSHDGRRG- 91
++L+G A GIP D + S SH G
Sbjct: 122 ----DVLEGGKHCTGAAGIPGSENNNNASLTNNNHHLHPNDGSMSDSGSESGSHKAGVGG 177
Query: 92 ----------------PKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRI 135
P R RT+L +Q + + +P+P ++E L TGLS R+
Sbjct: 178 VRGSGGHKSGGGSDGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRV 237
Query: 136 VQ 137
++
Sbjct: 238 IR 239
>gi|324509239|gb|ADY43889.1| Insulin enhancer protein isl-2b [Ascaris suum]
Length = 427
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 73/182 (40%), Gaps = 46/182 (25%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C G +LVM+ V+HV CF C+ C RL GE+F+IK +L+CR D
Sbjct: 95 LFATKCSRCDGTFGRTDLVMRARHLVYHVNCFTCLSCEKRLVPGEEFIIKDDELYCRADC 154
Query: 62 E-------------------------KEVEMLQGYAQGIP---------FDLITS----- 82
E + L + P ++IT+
Sbjct: 155 EPTNIEQPSSIKTDIFGRDEDDCWDSSTLTSLDMHMAATPPLSLHSPKSDEVITTTFHNS 214
Query: 83 -------SKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRI 135
+K H + R RT+L +Q K + + +P ++E L TGLS R+
Sbjct: 215 SSSSSGSTKKHKKDKQTTRVRTVLNEKQLMTLKTCYAANARPDALMKEQLVEMTGLSARV 274
Query: 136 VQ 137
++
Sbjct: 275 IR 276
>gi|157134682|ref|XP_001663345.1| arrowhead [Aedes aegypti]
gi|108870378|gb|EAT34603.1| AAEL013168-PA, partial [Aedes aegypti]
Length = 306
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 6/135 (4%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C + + V + + FH+ CF C CG +L GEQF + ++ C+ Y
Sbjct: 65 FGAKCARCCRSISASDWVRRARELTFHLACFACDSCGRQLSTGEQFALVDDKVLCKTHYS 124
Query: 63 KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
+ + G D S KR RT T +Q + +A+F I P +
Sbjct: 125 EMFDCGTSSDDGCEADGFQKSNK------TKRVRTTFTEEQLQILQANFNIDSNPDGQDL 178
Query: 123 EGLARDTGLSVRIVQ 137
E +A TGLS R+ Q
Sbjct: 179 ERIASVTGLSKRVTQ 193
>gi|326668246|ref|XP_685757.4| PREDICTED: LIM/homeobox protein Lhx6 [Danio rerio]
Length = 270
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ ++ + + ++++H+ CF C C +L GE+F + + Q+ CR Y+ +
Sbjct: 93 KCARCGHQVSANDWIRRAGNDIYHLACFACFFCKRQLSTGEEFGLMENQVLCRVHYDITL 152
Query: 66 EMLQGYA-QGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
LQ + G L + + KRPRT T++Q + + F P +
Sbjct: 153 LNLQQLSDNGNLIHLDGALPIQYLPKASKRPRTSFTSEQIQIMQTHFIRDKNPDAATLQR 212
Query: 125 LARDTGLSVRIVQ 137
LA TGLS R++Q
Sbjct: 213 LADTTGLSRRVIQ 225
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+L V C GCS ++ D V+K +H++C C VC L I+ ++FCR D
Sbjct: 27 ILPVFICTGCSTEIF-DRYVLKVNGLTWHLRCLQCSVCAVSLGHQNSCFIRNKEIFCRTD 85
Query: 61 YEK 63
Y
Sbjct: 86 YNS 88
>gi|47221465|emb|CAG08127.1| unnamed protein product [Tetraodon nigroviridis]
Length = 535
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + +V+H+ CF C C +L GE+F + +G++ CR Y+ +
Sbjct: 79 KCAQCGRQVYASDWVRRARGSVYHLACFACFSCKRQLSTGEEFGLVEGRVLCRSHYDIML 138
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
+ L+ A+ G+ + S + KR RT T +Q + ++ F P +
Sbjct: 139 DNLRRAAENGTGLTLEGALPSDQDCQPKPAKRARTSFTAEQLQVMQSQFAQDNNPDAQTL 198
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 199 QKLAEMTGLSRRVIQ 213
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
+C C + D ++K + +H+ C C VC + L++ +K ++FC+ DY
Sbjct: 17 NQCASCGMDI-QDRYLLKVNNLNWHLGCLECSVCRASLRQHNSCYVKNKEIFCKLDY 72
>gi|348551170|ref|XP_003461403.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5-like
[Cavia porcellus]
Length = 404
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 31/146 (21%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKP 117
R PRT + +Q KA+F +P P
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPSP 205
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGCERPIL-DRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>gi|34733869|gb|AAQ81867.1| islet 2 [Ambystoma mexicanum]
Length = 361
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 25/157 (15%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ + V+H++CF C +C +L G++F +++ +L CR ++
Sbjct: 84 LFGVKCAQCGLGFSSSDLVMRARERVYHMECFRCSLCNRQLLPGDEFCLREHELLCRAEH 143
Query: 62 EK-------------EVEMLQGYAQGIPFDLI-------TSSKSHDGRRGPK--RPRTIL 99
LQG G P L TS + H ++ K R RT+L
Sbjct: 144 SHLDREAAGSPPSPTSPGPLQG---GRPLHLADSVSGRQTSLRPHAHKQAEKTTRVRTVL 200
Query: 100 TTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
+Q + + +P+P ++E L TGLS R++
Sbjct: 201 NEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 237
>gi|312073118|ref|XP_003139376.1| mechanosensory protein 3 [Loa loa]
Length = 248
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 41/171 (23%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVF-HVQCFVCVVCGSRLQRGEQFVIKQ----------- 52
+C GC + + P E++ K N+F H+ C C+ CG ++ +GEQ I +
Sbjct: 13 NRCAGCWQGIAPTEMIYKIKSNIFYHITCHRCIQCGRKISQGEQICINKISKSIACIAHT 72
Query: 53 ---GQLFCRPDYEKEVEMLQGYAQGIPFDLITS----------SKSHDG----------- 88
LF P V +L+ G+ D ++ S SH+
Sbjct: 73 VCSDNLFTIPTPTTAVCILETDDGGLLSDAVSRELDYSSTNLFSHSHETYGYEQSDEANF 132
Query: 89 --RRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRG PRT + Q F +PKP + VR LA +TGLS+R++Q
Sbjct: 133 FKRRG---PRTTIKQYQLDVLNRMFTSTPKPSKHVRAKLALETGLSMRVIQ 180
>gi|393910486|gb|EFO24691.2| mechanosensory protein 3 [Loa loa]
Length = 221
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 41/171 (23%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVF-HVQCFVCVVCGSRLQRGEQFVIKQ----------- 52
+C GC + + P E++ K N+F H+ C C+ CG ++ +GEQ I +
Sbjct: 13 NRCAGCWQGIAPTEMIYKIKSNIFYHITCHRCIQCGRKISQGEQICINKISKSIACIAHT 72
Query: 53 ---GQLFCRPDYEKEVEMLQGYAQGIPFDLITS----------SKSHDG----------- 88
LF P V +L+ G+ D ++ S SH+
Sbjct: 73 VCSDNLFTIPTPTTAVCILETDDGGLLSDAVSRELDYSSTNLFSHSHETYGYEQSDEANF 132
Query: 89 --RRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRG PRT + Q F +PKP + VR LA +TGLS+R++Q
Sbjct: 133 FKRRG---PRTTIKQYQLDVLNRMFTSTPKPSKHVRAKLALETGLSMRVIQ 180
>gi|410923575|ref|XP_003975257.1| PREDICTED: LIM/homeobox protein Lhx6-like [Takifugu rubripes]
Length = 310
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + +V+H+ CF C C +L GE+F + +G++ CR Y+ +
Sbjct: 92 KCAQCGRQVYASDWVRRARGSVYHLACFACFSCKRQLSTGEEFGLVEGRVLCRSHYDIML 151
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
+ L+ A+ G+ + S + KR RT T +Q + ++ F P +
Sbjct: 152 DNLRRAAENGTGLTLEGALPSDQDCQPKPAKRARTSFTAEQLQVMQSQFAQDNNPDAQTL 211
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 212 QKLAEMTGLSRRVIQ 226
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
+C C ++ D ++K + +H+ C C VC + L++ +K ++FC+ DY
Sbjct: 30 NQCASCGMEIQ-DRYLLKVNNLNWHLGCLECSVCRASLRQHNSCYVKNKEIFCKLDY 85
>gi|432872837|ref|XP_004072149.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oryzias latipes]
Length = 346
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + +V+H+ CF C C +L GE+F + +G++ CR Y+ +
Sbjct: 128 KCAQCGRQVYASDWVRRARGSVYHLACFACFSCKRQLSTGEEFGLVEGRVLCRSHYDIML 187
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
+ L+ A+ G+ + S + KR RT T++Q + + F P +
Sbjct: 188 DNLRRAAESGTGLTLEGALPSDQDCQPKPAKRARTSFTSEQLQVMQTQFAQDNNPDAQTL 247
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 248 QKLAEMTGLSRRVIQ 262
>gi|410924249|ref|XP_003975594.1| PREDICTED: LIM/homeobox protein Lhx8-like [Takifugu rubripes]
Length = 338
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + + FH+ CF C C +L GE+ + + ++FCRP YE
Sbjct: 115 YGTRCTRCGRNINSSDWVRRVRGSTFHLACFSCSSCKRQLSTGEECGLLENRVFCRPHYE 174
Query: 63 KEVEMLQ-GYAQGIPF-----DLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPK 116
VE ++ G P D+ ++ R KR RT T Q + + F
Sbjct: 175 MVVENIKRAKKNGEPDSNDGEDMGDKEEASTTARPAKRARTSFTVDQLQVMQTQFAKDSN 234
Query: 117 PCRKVREGLARDTGLSVRIVQ 137
P + + L+ TGLS R++Q
Sbjct: 235 PDAQTLQRLSDRTGLSRRVIQ 255
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C C++ + D ++K D +HV+C C VC + L R IK+ Q+FC+ DY
Sbjct: 58 CTSCNKDI-VDRYLLKVNDLCWHVRCLSCTVCKTSLGRHVSCYIKEKQVFCKLDY 111
>gi|196000228|ref|XP_002109982.1| hypothetical protein TRIADDRAFT_14836 [Trichoplax adhaerens]
gi|190588106|gb|EDV28148.1| hypothetical protein TRIADDRAFT_14836, partial [Trichoplax
adhaerens]
Length = 215
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE--- 62
KC C+ + P E VMK + +H CF+C C L+ GE+F ++ +L+C+ ++
Sbjct: 64 KCPTCNSGISPKEHVMKAREYAYHCSCFICHTCNRLLKTGEEFAMRGCKLYCKEHFQSIT 123
Query: 63 ---KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCR 119
+ G D S+ D KR RT Q R K F ++ P
Sbjct: 124 SDHRHSHHSNKDNSGENHDSSNSNDITDEHGRSKRIRTSFKQPQLRTMKTYFALNHNPDS 183
Query: 120 KVREGLARDTGLSVRIVQ 137
K + L+ TGL+ R++Q
Sbjct: 184 KDLKQLSIKTGLNKRVLQ 201
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 7 CLGCSEKLGPDE-LVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC + E L ++ D +H+QC C C L + + +KQG +FCR DY
Sbjct: 1 CAGCGRSIMDQEYLGIQKTDKKWHIQCLRCYDCNEPLDKDQSCYVKQGNIFCRTDY 56
>gi|328793255|ref|XP_003251852.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Apis
mellifera]
Length = 418
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 42/178 (23%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC CSE D+ VM+ ++H++CF C C +L G++F ++Q LFCR D+
Sbjct: 70 LFGTKCDKCSECFSKDDYVMRARSKIYHIKCFRCSACMRQLVPGDEFALRQDGLFCRHDH 129
Query: 62 EK-EVEMLQGYAQGIP------------------------FDLITSSKSHDGRRG----- 91
+ E L G+P D + S SH G
Sbjct: 130 DVLEGGKLCSGPGGVPGSENNNNASLMNNNHHLHPNDGSISDSGSESGSHKAGMGGTRGS 189
Query: 92 ------------PKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
P R RT+L +Q + + +P+P ++E L TGLS R+++
Sbjct: 190 GSHKSGGGSDGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 247
>gi|348533440|ref|XP_003454213.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oreochromis niloticus]
Length = 392
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + +V+H+ CF C C +L GE+F + +G++ CR Y+ +
Sbjct: 174 KCAQCGRQVYASDWVRRARGSVYHLACFACFSCKRQLSTGEEFGLVEGRVLCRSHYDIML 233
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
+ L+ A+ G+ + S + KR RT T +Q + + F P +
Sbjct: 234 DNLRRAAENGTGLTLEGALPSDQDCQPKPAKRARTSFTAEQLQVMQTQFAQDNNPDAQTL 293
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 294 QKLAEMTGLSRRVIQ 308
>gi|380018327|ref|XP_003693083.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Apis florea]
Length = 419
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 42/178 (23%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC CSE D+ VM+ ++H++CF C C +L G++F ++Q LFCR D+
Sbjct: 71 LFGTKCDKCSECFSKDDYVMRARSKIYHIKCFRCSACMRQLVPGDEFALRQDGLFCRHDH 130
Query: 62 E-KEVEMLQGYAQGIP------------------------FDLITSSKSHDGRRG----- 91
+ E L G+P D + S SH G
Sbjct: 131 DVLEGGKLCSGPGGVPGSENNNNASLMNNNHHLHPNDGSISDSGSESGSHKAGMGGTRGS 190
Query: 92 ------------PKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
P R RT+L +Q + + +P+P ++E L TGLS R+++
Sbjct: 191 GSHKSGGGSDGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 248
>gi|14587199|gb|AAK70500.1|AF390073_1 homeodomain protein LMX1B [Rattus norvegicus]
Length = 38
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 34/37 (91%)
Query: 101 TQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
TQQRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 1 TQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 37
>gi|195587560|ref|XP_002083529.1| GD13784 [Drosophila simulans]
gi|194195538|gb|EDX09114.1| GD13784 [Drosophila simulans]
Length = 278
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 10 CSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE-ML 68
C + + V + + VFH+ CF C CG +L GEQF + ++ C+ Y + VE
Sbjct: 75 CCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHYLETVEGGT 134
Query: 69 QGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARD 128
+G D SK+ KR RT T +Q + +A+F+I P + E +A
Sbjct: 135 TSSDEGCDGDGYHKSKT-------KRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASV 187
Query: 129 TGLSVRIVQ 137
TGLS R+ Q
Sbjct: 188 TGLSKRVTQ 196
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
++ C C E + D ++ +H C C +C L R + I++ Q++C+ DY K
Sbjct: 5 LRSCAACGEPI-SDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSK 63
Query: 64 E 64
Sbjct: 64 N 64
>gi|395536948|ref|XP_003770470.1| PREDICTED: LIM/homeobox protein Lhx8-like [Sarcophilus harrisii]
Length = 362
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 138 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 197
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + S + + + KR RT T Q + +A F P
Sbjct: 198 CMMDNLKREVENGNGISVEGALLSEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 257
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 258 AQTLQKLAERTGLSRRVIQ 276
>gi|259013450|ref|NP_001158468.1| ISL LIM homeobox 1 [Saccoglossus kowalevskii]
gi|197320557|gb|ACH68440.1| islet homeobox protein [Saccoglossus kowalevskii]
Length = 383
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C+ ++ VM+ + +FH+ CF CV C +L G++F ++ LFC+ D+
Sbjct: 73 LFGTKCAKCNLGFSKNDFVMRARNKIFHIDCFRCVACSRQLIPGDEFALRDDGLFCKADH 132
Query: 62 EKEVEMLQGYAQGIPFDLI---TSSKSH-----DGRRGPKRP--------------RTIL 99
+ VE G G + T SH + R G RP RT+L
Sbjct: 133 DV-VERASGEVNGNNNNNNNHRTYMASHAEPMNNNRSGSLRPHVHKQETHHKTTRVRTVL 191
Query: 100 TTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+Q + + +P+P ++E L T LS R+++
Sbjct: 192 NEKQLHTLRTCYNANPRPDALMKEQLTEMTNLSPRVIR 229
>gi|46276323|gb|AAS86420.1| lhx7 [Oryzias latipes]
Length = 191
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y C C + + V + NV+H+ CF C C +L GE+F + +G++ CR Y+
Sbjct: 44 YGTWCACCGRNIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEGKVLCRIHYD 103
Query: 63 KEVEMLQ-GYAQGIPFDL---ITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ +G ++ + + + + + KR RT Q + +A F P
Sbjct: 104 CMLDNLKRAVEKGTGVNMEGAVPTEREINQPKPSKRARTSFPADQLQVMQAQFAQDNNPD 163
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA +TGLS R++Q
Sbjct: 164 AQTLQKLAEETGLSRRVIQ 182
>gi|125823566|ref|XP_001339831.1| PREDICTED: LIM/homeobox protein Lhx8-like [Danio rerio]
Length = 356
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C C E L + V + NV+H+ CF C C +L GE+F + +L CR Y ++
Sbjct: 147 CSCCRETLHSSDWVHRAKGNVYHLACFSCFSCKRQLSTGEEFALVGEKLLCRIHYSSMLD 206
Query: 67 MLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVRE 123
L A+ + + ++ ++ KR RT T Q + +A F P ++ +
Sbjct: 207 KLNRPAEKGKSVSPEKALAAGCEIKQKPSKRARTSFTADQLQVMQAQFVQDNNPDAQMLQ 266
Query: 124 GLARDTGLSVRIVQ 137
LA TGLS R++Q
Sbjct: 267 SLAEQTGLSRRVIQ 280
>gi|157119548|ref|XP_001659418.1| lim homeobox protein [Aedes aegypti]
gi|108875286|gb|EAT39511.1| AAEL008685-PA [Aedes aegypti]
Length = 345
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 74/192 (38%), Gaps = 59/192 (30%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
++C C + ELVM+ D +FHV CF C +CG L+ G+ I+ G++FC Y+ +
Sbjct: 76 RRCARCGSGISASELVMRAKDLIFHVNCFSCTICGQLLRGGDTAGIRDGRIFCGEHYDTD 135
Query: 65 V---EMLQGYAQ-----------------GIPFDLITSSK-------------------- 84
V M Y G P ++K
Sbjct: 136 VLSINMTPDYGSCPDVNPYRHLFRKVLLGGNPMARFGANKVVHRLGTIRKTRIPLAMTAG 195
Query: 85 -------SHDGRRGP------------KRPRTILTTQQRRAFKASFEISPKPCRKVREGL 125
S+DG + P KR RT Q R K+ F I+ P K + L
Sbjct: 196 PSSLDLSSYDGSQSPGSGGTLTPNCRTKRMRTSFKHHQLRTMKSYFAINQNPDAKDLKQL 255
Query: 126 ARDTGLSVRIVQ 137
A+ TGLS R++Q
Sbjct: 256 AQKTGLSKRVLQ 267
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
+KC GC + D + D +H QC C C + L+ ++G ++C+ DY +
Sbjct: 14 EKCAGCGISI-RDRYYLLVADRAWHNQCLRCCKCLANLETELSCYAREGNIYCKDDYYRH 72
>gi|51571947|ref|NP_001003980.1| LIM/homeobox protein Lhx8 [Danio rerio]
gi|50953779|gb|AAT90496.1| Lhx7 [Danio rerio]
gi|108742021|gb|AAI17602.1| LIM homeobox 8 [Danio rerio]
Length = 332
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + ++ V + N +H+ CF C C +L GE+F + ++ CR Y+
Sbjct: 108 YGTRCAHCGRNIHSNDWVRRAKGNTYHLACFACFSCKRQLSTGEEFALVDERVLCRVHYD 167
Query: 63 KEVEMLQ---GYAQGIPFDLITSSKSHDGRRGP-KRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ +G+ + S+ + P KR RT T Q + +A F P
Sbjct: 168 CMLDNLKRAMENGKGVNVEGAVPSEQEVNQPKPAKRARTSFTADQLQVMQAQFAQDNNPD 227
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 228 AQTLQKLAERTGLSRRVIQ 246
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C C ++ D+ ++K D +HV+C C VC + L R IK+ ++FC+ DY
Sbjct: 51 CTSCGTEIV-DKYLLKVNDMCWHVRCLSCSVCQTSLGRHISCYIKEKEIFCKLDY 104
>gi|332023208|gb|EGI63464.1| Insulin gene enhancer protein ISL-1 [Acromyrmex echinatior]
Length = 432
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 50/182 (27%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC CS ++ VM+ ++HV+CF C C RL+ G++F ++Q LFCR D+
Sbjct: 86 LFGTKCDKCSRCFSKNDYVMRAKTKIYHVECFRCCACSRRLETGDEFALRQDGLFCRLDH 145
Query: 62 EKEVEMLQGYAQ-----GIP------------------------FDLITSSKSHDGRRG- 91
++L+G GIP D + S SH G
Sbjct: 146 ----DVLEGGKHCTGGVGIPGSENNNNASLTNNNHHLHPNDGSMSDSGSESGSHKAGVGG 201
Query: 92 ----------------PKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRI 135
P R RT+L +Q + + +P+P ++E L TGLS R+
Sbjct: 202 VRGSGGHKSGGGSDGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRV 261
Query: 136 VQ 137
++
Sbjct: 262 IR 263
>gi|225543484|ref|NP_001139388.1| apterous [Tribolium castaneum]
gi|224459214|gb|ACN43342.1| apterous b [Tribolium castaneum]
Length = 361
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
M V +C C + +ELVM+ D+V+H+ CF C CG L +G+ F ++ G ++CRP
Sbjct: 86 MFAVTRCGRCQAGISANELVMRARDSVYHLHCFSCTSCGMPLSKGDHFGMRDGLIYCRPH 145
Query: 61 YE 62
YE
Sbjct: 146 YE 147
>gi|444727546|gb|ELW68032.1| LIM/homeobox protein Lhx8 [Tupaia chinensis]
Length = 348
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 124 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 183
Query: 63 KEVEMLQ-----GYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKP 117
++ L+ G + L+T + + KR RT T Q + +A F P
Sbjct: 184 CMLDNLKREVENGNGISVEGALLTDQDVNHPKPA-KRARTSFTADQLQVMQAQFAQDNNP 242
Query: 118 CRKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 243 DAQTLQKLAERTGLSRRVIQ 262
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 76 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 120
>gi|345321290|ref|XP_003430404.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Ornithorhynchus
anatinus]
Length = 347
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 123 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 182
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 183 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 242
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 243 AQTLQKLAERTGLSRRVIQ 261
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 75 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 119
>gi|324508533|gb|ADY43602.1| Insulin gene enhancer protein isl-2b [Ascaris suum]
Length = 452
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 46/182 (25%), Positives = 69/182 (37%), Gaps = 46/182 (25%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C G +LVM+ V+HV CF C+ C RL GE+F+IK +L+CR D
Sbjct: 95 LFATKCSRCDGTFGRTDLVMRARHLVYHVNCFTCLSCEKRLVPGEEFIIKDDELYCRADC 154
Query: 62 E----------------------------------------------KEVEMLQGYAQGI 75
E K E++
Sbjct: 155 EPTNIEQPSSIKTDIFGRDEDDCWDSSTLTSLDMHMAATPPLSLHSPKSDEVITTTFHNS 214
Query: 76 PFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRI 135
S+K H + R RT+L +Q K + + +P ++E L TGLS R+
Sbjct: 215 SSSSSGSTKKHKKDKQTTRVRTVLNEKQLMTLKTCYAANARPDALMKEQLVEMTGLSARV 274
Query: 136 VQ 137
++
Sbjct: 275 IR 276
>gi|327276679|ref|XP_003223095.1| PREDICTED: LIM/homeobox protein Lhx8-like [Anolis carolinensis]
Length = 379
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 10/142 (7%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 155 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 214
Query: 63 -------KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISP 115
+EVE G + L+T + + KR RT T Q + +A F
Sbjct: 215 CMLDNLKREVE--NGNGISVEGALLTEQDVNHPKPA-KRARTSFTADQLQVMQAQFAQDN 271
Query: 116 KPCRKVREGLARDTGLSVRIVQ 137
P + + LA TGLS R++Q
Sbjct: 272 NPDAQTLQKLAERTGLSRRVIQ 293
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 107 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 151
>gi|351696280|gb|EHA99198.1| LIM/homeobox protein Lhx8 [Heterocephalus glaber]
Length = 348
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 124 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 183
Query: 63 KEVEMLQ-----GYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKP 117
++ L+ G + L+T + + KR RT T Q + +A F P
Sbjct: 184 FMLDNLKREVENGNGISVEGALLTEQDVNHPKPA-KRARTSFTADQLQVMQAQFAQDNNP 242
Query: 118 CRKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 243 DAQTLQKLAERTGLSRRVIQ 262
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K +HV+C C VC + L R IK +FC+ DY
Sbjct: 76 DKYLLKVNGLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 120
>gi|17508249|ref|NP_491668.1| Protein LIM-7 [Caenorhabditis elegans]
gi|1658400|gb|AAB18328.1| CeLIM-7, partial [Caenorhabditis elegans]
gi|351020974|emb|CCD62964.1| Protein LIM-7 [Caenorhabditis elegans]
Length = 452
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 74/198 (37%), Gaps = 62/198 (31%)
Query: 2 LYVKKCLGCSEKLGPDELVMKT-LDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCR-- 58
L+ +C C +LVM+ NVFH+ CF CV C RLQ GE+F IK L+CR
Sbjct: 113 LFTTRCSRCHGDFDKTDLVMRAGPQNVFHLNCFACVACEKRLQTGEEFQIKNNSLYCRSD 172
Query: 59 -------------PDYEK-----------------EVEMLQGYAQGIPFDLITS----SK 84
PDY K E E + + D TS S
Sbjct: 173 CRGLDNPDTSASVPDYSKLNNNNNNDNNNSSSNFDEDEWDEERSTLTSLDNNTSSPLGSP 232
Query: 85 SHDGRRGP-------------------------KRPRTILTTQQRRAFKASFEISPKPCR 119
DG R P R RT+L Q + + + I+ +P
Sbjct: 233 KSDGVRTPLFGHHNSGSGGSTSSCGKKKKDKQATRVRTVLNENQLKILRDCYSINSRPDA 292
Query: 120 KVREGLARDTGLSVRIVQ 137
++E L TGLS R+++
Sbjct: 293 TLKERLVEMTGLSARVIR 310
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 7 CLGCSEKLGPDELVMKTLDNV-FHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC ++ D ++ N+ FH QC CV C L + +K GQ +CR DY +
Sbjct: 56 CAGCRLEIS-DRYFLRVNPNLEFHAQCLKCVQCSRPLDENQTAFVKNGQTYCRDDYRR 112
>gi|410967547|ref|XP_003990280.1| PREDICTED: LIM/homeobox protein Lhx8 [Felis catus]
Length = 346
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 122 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 181
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 182 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 241
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 242 AQTLQKLAERTGLSRRVIQ 260
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 74 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 118
>gi|440907910|gb|ELR57994.1| LIM/homeobox protein Lhx8 [Bos grunniens mutus]
Length = 375
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 151 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 210
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 211 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 270
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 271 AQTLQKLAERTGLSRRVIQ 289
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 103 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 147
>gi|355745377|gb|EHH50002.1| hypothetical protein EGM_00758, partial [Macaca fascicularis]
Length = 320
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 96 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 155
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 156 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 215
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 216 AQTLQKLAERTGLSRRVIQ 234
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 48 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 92
>gi|297473064|ref|XP_002686347.1| PREDICTED: LIM/homeobox protein Lhx8 [Bos taurus]
gi|296489244|tpg|DAA31357.1| TPA: LIM domain family member (lim-4)-like [Bos taurus]
Length = 346
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 122 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 181
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 182 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 241
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 242 AQTLQKLAERTGLSRRVIQ 260
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 74 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 118
>gi|395821904|ref|XP_003784270.1| PREDICTED: LIM/homeobox protein Lhx8 [Otolemur garnettii]
Length = 346
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 10/142 (7%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 122 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 181
Query: 63 -------KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISP 115
+EVE G + L+T + + KR RT T Q + +A F
Sbjct: 182 CMLDNLKREVE--NGNGISVEGALLTEQDVNHPKPA-KRARTSFTADQLQVMQAQFAQDN 238
Query: 116 KPCRKVREGLARDTGLSVRIVQ 137
P + + LA TGLS R++Q
Sbjct: 239 NPDAQTLQKLAERTGLSRRVIQ 260
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 74 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 118
>gi|261490776|ref|NP_001159787.1| LIM/homeobox protein Lhx8 [Sus scrofa]
gi|238683613|gb|ACR54090.1| LIM homeobox 8 [Sus scrofa]
Length = 295
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 71 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 130
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 131 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 190
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 191 AQTLQKLAERTGLSRRVIQ 209
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 23 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 67
>gi|224058535|ref|XP_002189228.1| PREDICTED: LIM/homeobox protein Lhx8 [Taeniopygia guttata]
Length = 347
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 10/142 (7%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 123 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 182
Query: 63 -------KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISP 115
+EVE G + L+T + + KR RT T Q + +A F
Sbjct: 183 CMLDNLKREVE--NGNGISVEGALLTEQDVNHPKPA-KRARTSFTADQLQVMQAQFAQDN 239
Query: 116 KPCRKVREGLARDTGLSVRIVQ 137
P + + LA TGLS R++Q
Sbjct: 240 NPDAQTLQKLAERTGLSRRVIQ 261
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 75 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 119
>gi|403257739|ref|XP_003921454.1| PREDICTED: LIM/homeobox protein Lhx8 [Saimiri boliviensis
boliviensis]
Length = 346
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 122 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 181
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 182 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 241
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 242 AQTLQKLAERTGLSRRVIQ 260
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 74 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 118
>gi|345321288|ref|XP_001521123.2| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Ornithorhynchus
anatinus]
Length = 347
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 10/142 (7%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 123 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 182
Query: 63 -------KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISP 115
+EVE G + L+T + + KR RT T Q + +A F
Sbjct: 183 CMLDNLKREVE--NGNGISVEGALLTEQDVNHPKPA-KRARTSFTADQLQVMQAQFAQDN 239
Query: 116 KPCRKVREGLARDTGLSVRIVQ 137
P + + LA TGLS R++Q
Sbjct: 240 NPDAQTLQKLAERTGLSRRVIQ 261
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 75 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 119
>gi|50083287|ref|NP_001001933.1| LIM/homeobox protein Lhx8 isoform 1 [Homo sapiens]
gi|114557210|ref|XP_524738.2| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Pan troglodytes]
gi|297664648|ref|XP_002810744.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Pongo abelii]
gi|397521070|ref|XP_003830626.1| PREDICTED: LIM/homeobox protein Lhx8 [Pan paniscus]
gi|426330048|ref|XP_004026038.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Gorilla gorilla
gorilla]
gi|296434566|sp|Q68G74.2|LHX8_HUMAN RecName: Full=LIM/homeobox protein Lhx8; Short=LIM homeobox protein
8
Length = 356
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 132 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 191
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 192 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 251
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 252 AQTLQKLAERTGLSRRVIQ 270
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 84 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 128
>gi|358411510|ref|XP_589896.5| PREDICTED: LIM/homeobox protein Lhx8 [Bos taurus]
Length = 443
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 229 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 288
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 289 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 348
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 349 AQTLQKLAERTGLSRRVIQ 367
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 181 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 225
>gi|402854983|ref|XP_003892129.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Papio anubis]
Length = 346
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 10/142 (7%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 122 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 181
Query: 63 -------KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISP 115
+EVE G + L+T + + KR RT T Q + +A F
Sbjct: 182 CMLDNLKREVE--NGNGISVEGALLTEQDVNHPKPA-KRARTSFTADQLQVMQAQFAQDN 238
Query: 116 KPCRKVREGLARDTGLSVRIVQ 137
P + + LA TGLS R++Q
Sbjct: 239 NPDAQTLQKLAERTGLSRRVIQ 260
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 74 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 118
>gi|313232524|emb|CBY19194.1| unnamed protein product [Oikopleura dioica]
Length = 281
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 17/147 (11%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
K+CLGC + ++ + FH +C V C + +G F G++ C +
Sbjct: 66 KRCLGCQGDINMNDWIQTFAAGTFHHRCIVYKCCNCAVPKGAPFHFVNGEIICPTHMKIS 125
Query: 65 VEMLQGYAQGIP--------------FDLITSSKSHDGRRGPKRPRTILTTQQRRAFKAS 110
Q ++G P + I S S RRGP RT + +Q K +
Sbjct: 126 NPQEQPASEGDPESSPESTDAQEEAANEKIEISPSKTKRRGP---RTTIKAKQLEILKNA 182
Query: 111 FEISPKPCRKVREGLARDTGLSVRIVQ 137
F +PKP R +RE L+ +TGLS+R++Q
Sbjct: 183 FLAAPKPTRHMREKLSTETGLSMRVIQ 209
>gi|368711326|ref|NP_001243043.1| LIM/homeobox protein Lhx8 isoform 2 [Homo sapiens]
gi|395730366|ref|XP_003775714.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Pongo abelii]
gi|410033125|ref|XP_003949492.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Pan troglodytes]
gi|426330050|ref|XP_004026039.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Gorilla gorilla
gorilla]
gi|441637563|ref|XP_004090066.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Nomascus
leucogenys]
Length = 346
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 122 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 181
Query: 63 KEVEMLQ-----GYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKP 117
++ L+ G + L+T + + KR RT T Q + +A F P
Sbjct: 182 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPA-KRARTSFTADQLQVMQAQFAQDNNP 240
Query: 118 CRKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 241 DAQTLQKLAERTGLSRRVIQ 260
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 74 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 118
>gi|344278994|ref|XP_003411276.1| PREDICTED: LIM/homeobox protein Lhx8 [Loxodonta africana]
Length = 346
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 122 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 181
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 182 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 241
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 242 AQTLQKLAERTGLSRRVIQ 260
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 74 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 118
>gi|301763072|ref|XP_002916962.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx8-like
[Ailuropoda melanoleuca]
Length = 574
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 10/142 (7%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 360 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 419
Query: 63 -------KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISP 115
+EVE G + L+T + + KR RT T Q + +A F
Sbjct: 420 CMLDNLKREVE--NGNGISVEGALLTEQDVNHPKPA-KRARTSFTADQLQVMQAQFAQDN 476
Query: 116 KPCRKVREGLARDTGLSVRIVQ 137
P + + LA TGLS R++Q
Sbjct: 477 NPDAQTLQKLAERTGLSRRVIQ 498
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 312 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 356
>gi|390466088|ref|XP_002751019.2| PREDICTED: LIM/homeobox protein Lhx8 [Callithrix jacchus]
Length = 346
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 122 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 181
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 182 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 241
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 242 AQTLQKLAERTGLSRRVIQ 260
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 74 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 118
>gi|51494804|gb|AAH40321.1| LIM homeobox 8 [Homo sapiens]
gi|312150920|gb|ADQ31972.1| LIM homeobox 8 [synthetic construct]
Length = 356
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 132 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 191
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 192 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 251
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 252 AQTLQKLAERTGLSRRVIQ 270
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 84 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 128
>gi|332222205|ref|XP_003260257.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Nomascus
leucogenys]
Length = 356
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 132 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 191
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 192 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 251
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 252 AQTLQKLAERTGLSRRVIQ 270
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 84 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 128
>gi|291398678|ref|XP_002715959.1| PREDICTED: LIM homeobox 8 [Oryctolagus cuniculus]
Length = 371
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 153 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 212
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 213 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 272
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 273 AQTLQKLAERTGLSRRVIQ 291
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 105 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 149
>gi|281354377|gb|EFB29961.1| hypothetical protein PANDA_005098 [Ailuropoda melanoleuca]
Length = 351
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 127 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 186
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 187 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 246
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 247 AQTLQKLAERTGLSRRVIQ 265
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 79 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 123
>gi|297278964|ref|XP_001097664.2| PREDICTED: LIM/homeobox protein Lhx8-like [Macaca mulatta]
gi|402854981|ref|XP_003892128.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Papio anubis]
Length = 356
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 132 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 191
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 192 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 251
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 252 AQTLQKLAERTGLSRRVIQ 270
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 84 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 128
>gi|426218775|ref|XP_004003612.1| PREDICTED: LIM/homeobox protein Lhx8 [Ovis aries]
Length = 442
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 218 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 277
Query: 63 KEVEMLQ-----GYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKP 117
++ L+ G + L+T + + KR RT T Q + +A F P
Sbjct: 278 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPA-KRARTSFTADQLQVMQAQFAQDNNP 336
Query: 118 CRKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 337 DAQTLQKLAERTGLSRRVIQ 356
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 170 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 214
>gi|313221147|emb|CBY31973.1| unnamed protein product [Oikopleura dioica]
gi|313242468|emb|CBY34611.1| unnamed protein product [Oikopleura dioica]
Length = 281
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 17/147 (11%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
K+CLGC + ++ + FH +C V C + +G F G++ C +
Sbjct: 66 KRCLGCQGDINLNDWIQTFAAGTFHHRCIVYKCCNCAVPKGAPFHFVNGEIICPTHMKIS 125
Query: 65 VEMLQGYAQGIP--------------FDLITSSKSHDGRRGPKRPRTILTTQQRRAFKAS 110
Q ++G P + I S S RRGP RT + +Q K +
Sbjct: 126 NPQEQPASEGDPESSPESTDAQEEAANEKIEISPSKTKRRGP---RTTIKAKQLEILKNA 182
Query: 111 FEISPKPCRKVREGLARDTGLSVRIVQ 137
F +PKP R +RE L+ +TGLS+R++Q
Sbjct: 183 FLAAPKPTRHMREKLSTETGLSMRVIQ 209
>gi|47215186|emb|CAG01452.1| unnamed protein product [Tetraodon nigroviridis]
Length = 272
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 69 YGTWCACCGRNIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 128
Query: 63 KEVEMLQ-GYAQGIPFDL---ITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ +G ++ + + + + + KR RT T Q + +A F P
Sbjct: 129 CMLDNLKRAVEKGNSVNMEGAVPTEQEINQPKPSKRARTSFTADQLQVMQAQFAQDNNPD 188
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 189 AQTLQKLAEQTGLSRRVIQ 207
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C CSE++ D+ ++K D +HV+C C VC + L IK+ ++FC+ DY
Sbjct: 12 CASCSEEI-VDKYLLKVNDLCWHVRCLSCSVCHTSLSSHTSCYIKEKEVFCKLDY 65
>gi|348586764|ref|XP_003479138.1| PREDICTED: LIM/homeobox protein Lhx8-like [Cavia porcellus]
Length = 485
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 272 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 331
Query: 63 KEVEMLQ-----GYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKP 117
++ L+ G + L+T + + KR RT T Q + +A F P
Sbjct: 332 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPA-KRARTSFTADQLQVMQAQFAQDNNP 390
Query: 118 CRKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 391 DAQTLQKLAERTGLSRRVIQ 410
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 224 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 268
>gi|74096249|ref|NP_001027767.1| LIM homeodomain protein [Ciona intestinalis]
gi|3150146|emb|CAA06919.1| LIM homeodomain protein [Ciona intestinalis]
Length = 381
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 27/163 (16%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C ++ VM+ D ++H+QCF CV C +L G++F ++ LFC+ D+
Sbjct: 76 LFGTKCNKCGLCFSKNDFVMRARDKIYHIQCFKCVACSRQLIPGDEFALRDDGLFCKADH 135
Query: 62 E---------KEVEMLQGYAQG-IPFDLITS-----------SKSHDG--RRG----PKR 94
E + M+ G Q P +I+ S H G RR R
Sbjct: 136 EVATSGDMMVHDGHMIPGIPQTPNPQGVISPQMGGERVISHRSGGHSGGQRRSKDAKTTR 195
Query: 95 PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RT+L +Q + + + +P ++E L TGLS R+++
Sbjct: 196 VRTVLNEKQLHTLRTCYAANCRPDALMKEQLTEMTGLSSRVIR 238
>gi|70570020|dbj|BAE06522.1| transcription factor protein [Ciona intestinalis]
Length = 402
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 27/163 (16%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C ++ VM+ D ++H+QCF CV C +L G++F ++ LFC+ D+
Sbjct: 97 LFGTKCNKCGLCFSKNDFVMRARDKIYHIQCFKCVACSRQLIPGDEFALRDDGLFCKADH 156
Query: 62 E---------KEVEMLQGYAQG-IPFDLITS-----------SKSHDG--RRG----PKR 94
E + M+ G Q P +I+ S H G RR R
Sbjct: 157 EVATSGDMMVHDGHMIPGIPQTPNPQGVISPQMGGERVISHRSGGHSGGQRRSKDAKTTR 216
Query: 95 PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RT+L +Q + + + +P ++E L TGLS R+++
Sbjct: 217 VRTVLNEKQLHTLRTCYAANCRPDALMKEQLTEMTGLSSRVIR 259
>gi|410921222|ref|XP_003974082.1| PREDICTED: LIM/homeobox protein Lhx8-like [Takifugu rubripes]
Length = 324
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 112 YGTWCACCGRNIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 171
Query: 63 KEVEMLQ-GYAQGIPFDL---ITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ +G ++ + + + + + KR RT T Q + +A F P
Sbjct: 172 CMLDNLKRAVEKGNSVNMEGAVPTEQEINQPKPSKRARTSFTADQLQVMQAQFAQDNNPD 231
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 232 AQTLQKLAEQTGLSRRVIQ 250
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C C E++ D+ ++K D +HV+C C VC + L IK+ ++FC+ DY
Sbjct: 55 CANCGEEI-VDKYLLKVNDLCWHVRCLSCSVCHTSLGSHTSCYIKEKEVFCKMDY 108
>gi|431897001|gb|ELK06265.1| LIM/homeobox protein Lhx8 [Pteropus alecto]
Length = 306
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 153 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 212
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 213 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 272
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 273 AQTLQKLAERTGLSRRVIQ 291
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 105 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 149
>gi|345802215|ref|XP_547330.3| PREDICTED: LIM/homeobox protein Lhx8 [Canis lupus familiaris]
Length = 462
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 248 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 307
Query: 63 KEVEMLQ-----GYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKP 117
++ L+ G + L+T + + KR RT T Q + +A F P
Sbjct: 308 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPA-KRARTSFTADQLQVMQAQFAQDNNP 366
Query: 118 CRKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 367 DAQTLQKLAERTGLSRRVIQ 386
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 200 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 244
>gi|94957756|ref|NP_001035556.1| LIM/homeobox protein Lhx8 [Gallus gallus]
gi|71800649|gb|AAZ41374.1| LIM homeodomain protein [Gallus gallus]
Length = 347
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 123 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 182
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ G+ + + + + + + KR RT T Q + A F P
Sbjct: 183 CMLDNLKREVENGNGVSMEGALLTEQDVNHPKPAKRARTSFTADQLQVMXAQFAQDNNPD 242
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 243 AQTLQKLAERTGLSRRVIQ 261
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 75 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 119
>gi|357622661|gb|EHJ74087.1| apterous [Danaus plexippus]
Length = 359
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
VK+C C + +ELVM+ D VFH+ CF CV CG+ L +G+ F ++ ++CRP Y+
Sbjct: 77 VKRCARCGNGITANELVMRARDMVFHLTCFTCVACGTLLSKGDVFGMRNSLVYCRPHYD 135
>gi|156552953|ref|XP_001603153.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Nasonia
vitripennis]
Length = 458
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 42/178 (23%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C + ++ VM+ ++H++CF C C +L G++F ++ LFCR D+
Sbjct: 104 LFGTKCDKCRQSFNKNDFVMRAKTKIYHLECFRCSACMRQLVPGDEFALRSDGLFCRHDH 163
Query: 62 EK-EVEML--QGYAQGIP------------------------FDLITSSKSH---DGRRG 91
+ E E + G GIP D + S SH G RG
Sbjct: 164 DALEGEKICGGGVPAGIPGNENNNNANLTNNNHHLHPNDGSLSDSGSESGSHKTVGGARG 223
Query: 92 ------------PKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
P R RT+L +Q + + +P+P ++E L TGLS R+++
Sbjct: 224 AAGHKGGGSDGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 281
>gi|380806555|gb|AFE75153.1| LIM/homeobox protein Lhx6 isoform 4, partial [Macaca mulatta]
Length = 188
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Query: 18 ELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVEMLQGYAQ---G 74
+ V + N +H+ CF C C +L GE+F + + ++ CR Y+ +E L+ A+ G
Sbjct: 7 DWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMIENLKRAAENGNG 66
Query: 75 IPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVR 134
+ + S+ + KR RT T +Q + +A F P + + LA TGLS R
Sbjct: 67 LTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRR 126
Query: 135 IVQ 137
++Q
Sbjct: 127 VIQ 129
>gi|23893425|emb|CAD12363.1| apterous-1 [Cupiennius salei]
Length = 253
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
M VK+C C + P ELVM+ ++V+H+ CF C C L +GE F +K ++CR
Sbjct: 2 MFSVKRCTRCHLSISPSELVMRAREHVYHLHCFTCATCNKPLTKGEYFGLKDDVIYCRQH 61
Query: 61 YEKEVEMLQGYAQ 73
YE ++ + Y
Sbjct: 62 YEMLLQYERPYVH 74
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%)
Query: 82 SSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
SS S + PKR RT Q RA K+ F I+ P K + L++ TGLS R++Q
Sbjct: 196 SSTSSEHLARPKRMRTSFKHHQLRAMKSYFAINHNPDAKDLKQLSQKTGLSKRVLQ 251
>gi|270004609|gb|EFA01057.1| hypothetical protein TcasGA2_TC003974 [Tribolium castaneum]
Length = 218
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
M V +C C + +ELVM+ D+V+H+ CF C CG L +G+ F ++ G ++CRP
Sbjct: 86 MFAVTRCGRCQAGISANELVMRARDSVYHLHCFSCTSCGIPLSKGDHFGMRDGLIYCRPH 145
Query: 61 YE--------KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKR 94
YE VEM+ ++ P ++ H R KR
Sbjct: 146 YELLDFCDTSDPVEMMFRGSESPPGYFANAAPQHHKGRPRKR 187
>gi|313226340|emb|CBY21484.1| unnamed protein product [Oikopleura dioica]
Length = 482
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/53 (60%), Positives = 41/53 (77%), Gaps = 3/53 (5%)
Query: 86 HDGRRGPKRPRTILTTQQRRAFKASFEI-SPKPCRKVREGLARDTGLSVRIVQ 137
H+G+ PKRPRTILTT+QR+ FKA F+ KP RK+RE LA +TGL+ R+VQ
Sbjct: 248 HNGK--PKRPRTILTTEQRKKFKAYFDSGGEKPSRKIREKLAAETGLTARVVQ 298
>gi|371573882|gb|AEX38311.1| islet [Mnemiopsis leidyi]
Length = 321
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C + ++ VM+ +N+FH+ CF C +C +L GE+F + L C +
Sbjct: 68 FGAKCHRCDQGFSSNDFVMRVRENIFHLSCFRCNMCSRQLVPGEEFALLPEGLICGT-HI 126
Query: 63 KEVEMLQGYAQGIPFDLITSSKSHDGRRGPK---RPRTILTTQQRRAFKASFEISPKPCR 119
K+ Q P ++ G G + R RT+L +Q R + + +P+P
Sbjct: 127 KQQHHQQAPLPNEPLPESKPRSTNTGSSGEQKTTRVRTVLNDRQLRILRTCYNNNPRPDA 186
Query: 120 KVREGLARDTGLSVRIVQ 137
++E + + TGLS R+++
Sbjct: 187 LMKEQMTKLTGLSARVIR 204
>gi|383858654|ref|XP_003704814.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Megachile
rotundata]
Length = 416
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 42/178 (23%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC CSE D+ VM+ ++H++CF C C +L G++F ++Q LFCR D+
Sbjct: 68 LFGTKCDKCSECFSKDDYVMRAKSKIYHIKCFRCSACMRQLVPGDEFALRQDGLFCRHDH 127
Query: 62 EK-EVEMLQGYAQGIP------------------------FDLITSSKSHDGRRG----- 91
+ E L G+P D + S SH G
Sbjct: 128 DVLEGGKLCSGPGGVPGSENNNNASLMNNNHHLHPNDGSISDSGSESGSHKAGVGGTRGS 187
Query: 92 ------------PKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
P R RT+L +Q + + +P+P ++E L TGLS R+++
Sbjct: 188 GGHKSGGGSDGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 245
>gi|148679946|gb|EDL11893.1| LIM homeobox protein 8, isoform CRA_a [Mus musculus]
Length = 291
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR ++
Sbjct: 82 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHFD 141
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 142 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 201
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 202 AQTLQKLAERTGLSRRVIQ 220
>gi|340717324|ref|XP_003397134.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Bombus
terrestris]
gi|350407611|ref|XP_003488142.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Bombus
impatiens]
Length = 458
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 42/178 (23%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC CSE D+ VM+ ++H++CF C C +L G++F ++Q LFCR D+
Sbjct: 110 LFGTKCDKCSECFSKDDYVMRARSKIYHIKCFRCSACMRQLVPGDEFALRQDGLFCRHDH 169
Query: 62 EK-EVEMLQGYAQGIP------------------------FDLITSSKSHDGRRG----- 91
+ E L G+P D + S SH G
Sbjct: 170 DVLEGGKLCSGPGGVPGSENNNNASLMNNNHHLHPNDGSISDSGSESGSHKAGVGGTRGS 229
Query: 92 ------------PKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
P R RT+L +Q + + +P+P ++E L TGLS R+++
Sbjct: 230 GGHKSGGGSDGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 287
>gi|242023961|ref|XP_002432399.1| LIM/homeobox protein Lhx2, putative [Pediculus humanus corporis]
gi|212517822|gb|EEB19661.1| LIM/homeobox protein Lhx2, putative [Pediculus humanus corporis]
Length = 383
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ +K+C C + ELVM+ D VFH+ CF C CG L +G+ F ++ G ++C P
Sbjct: 87 LFAIKRCSRCQTGISASELVMRAKDMVFHINCFTCTSCGIPLSKGDHFGMRNGLVYCHPH 146
Query: 61 YE 62
YE
Sbjct: 147 YE 148
>gi|158299279|ref|XP_319393.4| AGAP010209-PA [Anopheles gambiae str. PEST]
gi|157014289|gb|EAA13793.5| AGAP010209-PA [Anopheles gambiae str. PEST]
Length = 451
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 41/176 (23%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQ-GQLFCRPD 60
L+ KC C ++ VM+ ++H++CF C C +L G++F ++ G L+C+ D
Sbjct: 113 LFGTKCDKCGSSFSKNDFVMRAKTKIYHIECFRCSACARQLIPGDEFALRDGGSLYCKED 172
Query: 61 YEK-EVEMLQGYAQG-----------------------------IPFDLITSSKSHDGRR 90
++ E G QG + + + S SH R
Sbjct: 173 HDHLEKSSQNGLVQGAGKQERRIQKNNKHTNKRQSSPSNANVVHVNQNSGSESGSHKSLR 232
Query: 91 G----------PKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
G P R RT+L +Q + + +P+P ++E L TGLS R++
Sbjct: 233 GKGPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVI 288
>gi|260447067|ref|NP_001159513.1| ISL LIM homeobox 2 [Xenopus (Silurana) tropicalis]
gi|257043811|gb|ACV33233.1| islet 2 [Xenopus (Silurana) tropicalis]
Length = 333
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 9/136 (6%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ +C C L ELVM+ + V+H CF C VC RL GE+ ++ L C ++
Sbjct: 84 LFSARCPRCQGTLPRSELVMRVGERVYHTDCFRCSVCSRRLLPGEEISLRDQDLLCGAEH 143
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
G P L S H R RT+L +Q + + +P+P +
Sbjct: 144 NLS-------DSGRPSSL--RSHIHKQTEKTTRVRTVLNEKQLHTLRTCYAANPRPDALM 194
Query: 122 REGLARDTGLSVRIVQ 137
+E L TGLS R+++
Sbjct: 195 KEQLVEMTGLSPRVIR 210
>gi|149026292|gb|EDL82535.1| rCG29002 [Rattus norvegicus]
Length = 367
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR ++
Sbjct: 153 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHFD 212
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 213 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 272
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 273 AQTLQKLAERTGLSRRVIQ 291
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 105 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 149
>gi|113195680|ref|NP_034843.2| LIM/homeobox protein Lhx8 [Mus musculus]
gi|341941136|sp|O35652.4|LHX8_MOUSE RecName: Full=LIM/homeobox protein Lhx8; Short=LIM homeobox protein
8; AltName: Full=L3; AltName: Full=LIM/homeobox protein
Lhx7; Short=LIM homeobox protein 7
gi|3172042|dbj|BAA28628.1| LIM-homeodomain protein [Mus musculus]
gi|74227158|dbj|BAE38359.1| unnamed protein product [Mus musculus]
gi|116138618|gb|AAI25284.1| LIM homeobox protein 8 [Mus musculus]
gi|116138795|gb|AAI25282.1| LIM homeobox protein 8 [Mus musculus]
gi|148679947|gb|EDL11894.1| LIM homeobox protein 8, isoform CRA_b [Mus musculus]
gi|219519204|gb|AAI44769.1| LIM homeobox protein 8 [Mus musculus]
gi|1587483|prf||2206477A LIM homeo domain transcription factor
Length = 367
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR ++
Sbjct: 153 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHFD 212
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 213 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 272
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 273 AQTLQKLAERTGLSRRVIQ 291
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 105 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 149
>gi|344237493|gb|EGV93596.1| LIM/homeobox protein Lhx8 [Cricetulus griseus]
Length = 230
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 12/143 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY- 61
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR +
Sbjct: 29 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHFI 88
Query: 62 ------EKEVEMLQGYAQGIPFDLITSSK-SHDGRRGPKRPRTILTTQQRRAFKASFEIS 114
++EVE G + L+T SH + KR RT T Q + +A F
Sbjct: 89 CMLDNLKREVE--NGNGISVEGALLTEQDVSHP--KPAKRARTSFTADQLQVMQAQFAQD 144
Query: 115 PKPCRKVREGLARDTGLSVRIVQ 137
P + + LA TGLS R++Q
Sbjct: 145 NNPDAQTLQKLAERTGLSRRVIQ 167
>gi|56694832|gb|AAW23078.1| Lmx-a, partial [Oikopleura dioica]
Length = 325
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 41/53 (77%), Gaps = 3/53 (5%)
Query: 86 HDGRRGPKRPRTILTTQQRRAFKASFEI-SPKPCRKVREGLARDTGLSVRIVQ 137
H+G+ PKRPRTILTT+QR+ FKA F+ KP RK+RE LA +TGL+ R+VQ
Sbjct: 91 HNGK--PKRPRTILTTEQRKKFKAYFDSGGEKPSRKIREKLAAETGLTARVVQ 141
>gi|2435404|gb|AAB71337.1| arrowhead [Drosophila melanogaster]
Length = 214
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC + + V + + VFH+ CF C CG +L GEQF + ++ C+ Y
Sbjct: 65 FGAKCSKSCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHYL 124
Query: 63 KEVE-MLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
+ VE +G D SK+ KR RT T +Q + +A+F+I P +
Sbjct: 125 ETVEGGTTSSDEGCDGDGYHKSKT-------KRVRTTFTEEQLQVLQANFQIDSNPDGQD 177
Query: 122 REGLARDTGLSVRIVQ 137
E +A TGLS R+ +
Sbjct: 178 LERIASVTGLSKRVTE 193
>gi|313219547|emb|CBY30470.1| unnamed protein product [Oikopleura dioica]
Length = 313
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 41/53 (77%), Gaps = 3/53 (5%)
Query: 86 HDGRRGPKRPRTILTTQQRRAFKASFEI-SPKPCRKVREGLARDTGLSVRIVQ 137
H+G+ PKRPRTILTT+QR+ FKA F+ KP RK+RE LA +TGL+ R+VQ
Sbjct: 248 HNGK--PKRPRTILTTEQRKKFKAYFDSGGEKPSRKIREKLAAETGLTARVVQ 298
>gi|260794979|ref|XP_002592484.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
gi|229277704|gb|EEN48495.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
Length = 330
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 69/173 (39%), Gaps = 39/173 (22%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V++C C + E+VM+ D+V+H+ CF CV C L G++F ++ ++CR YE
Sbjct: 74 VQRCGRCHLGITAREMVMRARDSVYHLACFTCVTCDKALTTGDEFGMQGSAIYCRYHYET 133
Query: 64 --EVEMLQGYAQG---IPFDLITSS----------------------------------K 84
E G A G +P S
Sbjct: 134 FMRSEGRYGAAMGSKPLPHSPYYHSPGGVSYRGRPRKRGDSDSYCSVPGSSDNENDLDLN 193
Query: 85 SHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
H G KR RT Q R K+ F I+ P K + LA+ TGL+ R++Q
Sbjct: 194 GHGGATKTKRIRTSFKHHQLRTLKSYFAINHNPDSKDLQQLAQKTGLTKRVLQ 246
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC EK+ D + +D +H C C C RL K G+++CR DY +
Sbjct: 15 CGGCGEKI-QDRFFLHAVDRQWHSACLKCCECDVRLDCELTCFSKDGRIYCREDYYR 70
>gi|402591028|gb|EJW84958.1| hypothetical protein WUBG_04132 [Wuchereria bancrofti]
Length = 220
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVF-HVQCFVCVVCGSRLQRGEQFVIKQ----------- 52
+C GC + + P E++ K +++F H+ C C+ CG R+ +GEQ I +
Sbjct: 13 NRCAGCRQGIAPTEMIYKVKNDIFYHITCHRCIQCGKRISQGEQICINEISKSIACIAHT 72
Query: 53 ---GQLFCRPDYEKEVEMLQGYAQGIPFDL---ITSSKS-------------HDGRRGPK 93
LF + + +L+ G+ D + SS S +D K
Sbjct: 73 ICSDDLFSIATSTEALCILETDDNGLLSDASRKLNSSTSFFTHSHETYGYEQNDENNFLK 132
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + Q F +PKP + VR LA +TGLS+R++Q
Sbjct: 133 RRGPRTTIKQYQLDVLNRMFMSTPKPSKHVRAKLALETGLSMRVIQ 178
>gi|58866006|ref|NP_001012219.1| LIM/homeobox protein Lhx8 [Rattus norvegicus]
gi|58476609|gb|AAH90011.1| LIM homeobox 8 [Rattus norvegicus]
Length = 336
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR ++
Sbjct: 122 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHFD 181
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 182 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 241
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 242 AQTLQKLAERTGLSRRVIQ 260
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 74 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 118
>gi|405961382|gb|EKC27193.1| LIM/homeobox protein Lhx9 [Crassostrea gigas]
Length = 415
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 71/188 (37%), Gaps = 54/188 (28%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE- 62
VK+C C + + +ELVM+ D VFH+ CF C C L G+QF ++ ++CR DYE
Sbjct: 121 VKRCTRCHQGITANELVMRAKDLVFHINCFTCASCNKTLTTGDQFGMQDDLIYCRTDYEI 180
Query: 63 -------------------KEVEMLQGYA----QGIPFDLITSSKSHDG---------RR 90
+ G +G P HDG
Sbjct: 181 IFQGDYFSRMHPALPCPNNGHIPFYNGVGTAVQKGRPRKRKNHVIDHDGCPPGMGLGHGD 240
Query: 91 GPKR----------------PR-----TILTTQQRRAFKASFEISPKPCRKVREGLARDT 129
GP R PR T Q R K+ F ++ P K + LA+ T
Sbjct: 241 GPDRGGDLMRQDGGYGSQPPPRQKRVRTSFKHHQLRTMKSYFALNHNPDAKDLKQLAQKT 300
Query: 130 GLSVRIVQ 137
GLS R++Q
Sbjct: 301 GLSKRVLQ 308
>gi|2285798|dbj|BAA21649.1| LIM-homeodomain protein [Mus musculus]
Length = 426
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR ++
Sbjct: 212 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHFD 271
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 272 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 331
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 332 AQTLQKLAERTGLSRRVIQ 350
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 164 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 208
>gi|3319763|emb|CAA04012.1| Lhx7 protein [Mus musculus]
Length = 365
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR ++
Sbjct: 152 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHFD 211
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 212 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 271
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 272 AQTLQKLAERTGLSRRVIQ 290
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 104 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 148
>gi|354468096|ref|XP_003496503.1| PREDICTED: LIM/homeobox protein Lhx8-like [Cricetulus griseus]
Length = 344
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 12/143 (8%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY- 61
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR +
Sbjct: 130 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHFI 189
Query: 62 ------EKEVEMLQGYAQGIPFDLITSSK-SHDGRRGPKRPRTILTTQQRRAFKASFEIS 114
++EVE G + L+T SH + KR RT T Q + +A F
Sbjct: 190 CMLDNLKREVE--NGNGISVEGALLTEQDVSHP--KPAKRARTSFTADQLQVMQAQFAQD 245
Query: 115 PKPCRKVREGLARDTGLSVRIVQ 137
P + + LA TGLS R++Q
Sbjct: 246 NNPDAQTLQKLAERTGLSRRVIQ 268
>gi|348536383|ref|XP_003455676.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Oreochromis
niloticus]
Length = 333
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 72/188 (38%), Gaps = 50/188 (26%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCR----- 58
V++C C + E+VM+ D+V+H+ CF C C L G+ F +K ++CR
Sbjct: 132 VQRCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDSLVYCRLHFET 191
Query: 59 ----PDYEKEVEMLQGYAQGIPFDLITSSKSHDGRRG----------------------- 91
PDY ++ + A+G L + + ++G
Sbjct: 192 LVQGPDYHPQLNFAELAAKGGGLTLPYFNGTGTAQKGRPRKRKSPAMGIDIPSYNTGCNE 251
Query: 92 ------------------PKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSV 133
KR RT Q R K+ F I+ P K + LA+ TGL+
Sbjct: 252 NDTDHLDRDQQAYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTK 311
Query: 134 RIVQSRPI 141
R++Q I
Sbjct: 312 RVLQGEQI 319
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 73 CAGCGGKIS-DRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 126
>gi|380027052|ref|XP_003697250.1| PREDICTED: LIM/homeobox protein Lhx9-like [Apis florea]
Length = 390
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ +C C + ELVM+ D V+HV CF C CG+ L +G+ F + G ++CRP Y
Sbjct: 94 LFAGRCSRCRAGISATELVMRARDLVYHVACFTCASCGTPLNKGDHFGQRDGLVYCRPHY 153
Query: 62 E 62
E
Sbjct: 154 E 154
>gi|383850874|ref|XP_003700999.1| PREDICTED: LIM/homeobox protein Lhx9-like [Megachile rotundata]
Length = 391
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ V +C C + ELVM+ D V+HV CF C CG+ L +G+ F + G ++CRP
Sbjct: 94 LFAVSRCSRCRAGISASELVMRARDLVYHVACFTCASCGTPLNKGDHFGQRDGLVYCRPH 153
Query: 61 YE 62
YE
Sbjct: 154 YE 155
>gi|62859451|ref|NP_001015899.1| LIM homeobox 8 [Xenopus (Silurana) tropicalis]
gi|89268071|emb|CAJ83129.1| LIM homeobox 7/8 [Xenopus (Silurana) tropicalis]
gi|110645724|gb|AAI18740.1| LIM homeobox 8 [Xenopus (Silurana) tropicalis]
Length = 374
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR Y+
Sbjct: 150 YGTRCSRCGRHIHATDWVRRAKGNVYHLACFACYSCKRQLSTGEEFALVEEKVLCRVHYD 209
Query: 63 KEVEMLQ-----GYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKP 117
++ L+ G + L+T + + KR RT T Q + +A F P
Sbjct: 210 CMLDNLKRAVENGNRVSVEGALLTEQDINQPKPA-KRARTSFTADQLQVMQAQFAQDNNP 268
Query: 118 CRKVREGLARDTGLSVRIVQ 137
+ + L+ TGLS R++Q
Sbjct: 269 DAQTLQKLSERTGLSRRVIQ 288
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK ++C+ DY
Sbjct: 102 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIYCKLDY 146
>gi|410921836|ref|XP_003974389.1| PREDICTED: LIM/homeobox protein Lhx9-like [Takifugu rubripes]
Length = 506
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 71/184 (38%), Gaps = 50/184 (27%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCR----- 58
V++C C + E+VM+ D+V+H+ CF C C L G+ F +K ++CR
Sbjct: 239 VQRCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDSLVYCRLHFET 298
Query: 59 ----PDYEKEVEMLQGYAQGIPFDLITSSKSHDGRRG----------------------- 91
PDY ++ + A+G L + + ++G
Sbjct: 299 LVQGPDYHAQLNFAELAAKGGGLSLPYFNGTGTAQKGRPRKRKSPAMGIDISSYNTGCNE 358
Query: 92 ------------------PKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSV 133
KR RT Q R K+ F I+ P K + LA+ TGL+
Sbjct: 359 NDTDHLDRDQQAYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTK 418
Query: 134 RIVQ 137
R++Q
Sbjct: 419 RVLQ 422
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 180 CAGCGGKIS-DRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 233
>gi|328708276|ref|XP_001946004.2| PREDICTED: protein apterous-like [Acyrthosiphon pisum]
Length = 556
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+++C C + P ELVM+ D VFHV CF C VC + L +G+QF ++ G +FC+ Y++
Sbjct: 244 IRRCGRCHAGISPSELVMRARDTVFHVPCFSCTVCLAVLTKGDQFGMRDGAVFCQHHYQQ 303
>gi|443696308|gb|ELT97041.1| hypothetical protein CAPTEDRAFT_43751, partial [Capitella teleta]
Length = 271
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ +K+C GC + +ELVMK D+V+H+ CF C C L GE F +K+ ++CR
Sbjct: 58 LFAIKRCSGCHLAISANELVMKARDSVYHMNCFTCASCHKLLITGEHFGMKENLIYCRMH 117
Query: 61 YEKEVE 66
YE V+
Sbjct: 118 YEMVVQ 123
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC EK+ D ++ ++ +H C C C L + G +FC+ DY
Sbjct: 2 CAGCGEKI-TDRYYLQAVERAWHANCLRCAQCKLPLDSEVTCYARDGSIFCKEDY 55
>gi|345487079|ref|XP_001599685.2| PREDICTED: LIM/homeobox protein Lhx9-like [Nasonia vitripennis]
Length = 406
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ V +C C + ELVM+ D V+HV CF C CG+ L +G+ F + G ++CRP
Sbjct: 102 LFAVSRCSRCRAGISATELVMRARDLVYHVACFTCASCGTPLNKGDHFGQRDGLVYCRPH 161
Query: 61 YE 62
YE
Sbjct: 162 YE 163
>gi|290753132|dbj|BAI79511.1| apterous [Pedetontus unimaculatus]
Length = 222
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ +K+C C + ELVM+ D+VFHV CF CV C L +G+ F +++ +FCR
Sbjct: 12 LFGIKRCSRCHAAISSSELVMRARDHVFHVPCFTCVTCNVALTKGDHFGMQENAVFCRLH 71
Query: 61 YE 62
YE
Sbjct: 72 YE 73
>gi|74213688|dbj|BAE35644.1| unnamed protein product [Mus musculus]
Length = 367
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + NV+H+ CF C C +L GE+F + + ++ CR ++
Sbjct: 153 YGTRCSRCGRHIHSIDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHFD 212
Query: 63 KEVEMLQ---GYAQGIPFD-LITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
++ L+ GI + + + + + + KR RT T Q + +A F P
Sbjct: 213 CMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPD 272
Query: 119 RKVREGLARDTGLSVRIVQ 137
+ + LA TGLS R++Q
Sbjct: 273 AQTLQKLAERTGLSRRVIQ 291
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D+ ++K D +HV+C C VC + L R IK +FC+ DY
Sbjct: 105 DKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 149
>gi|291232097|ref|XP_002736028.1| PREDICTED: lim 1/5-like [Saccoglossus kowalevskii]
Length = 498
Score = 62.4 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GCS + P++LV + + VFH++CF C+VC +L GE+ +V+ + Q C+ DY
Sbjct: 60 YGTKCAGCSHGIAPNDLVRRARNKVFHLKCFTCMVCSKQLSTGEELYVVDENQYICKDDY 119
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Query: 89 RRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRGP RT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 267 RRGP---RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 312
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V+ C GC + D ++ LD +HV+C C C L ++ ++G+L+CR D+ +
Sbjct: 2 VQLCAGCDRPI-LDRFLLNVLDRAWHVKCVQCSDCNCTLS--DKCYSREGKLYCRTDFVR 58
Query: 64 EV-EMLQGYAQGI-PFDLITSSKS 85
G + GI P DL+ +++
Sbjct: 59 RYGTKCAGCSHGIAPNDLVRRARN 82
>gi|443694943|gb|ELT95961.1| hypothetical protein CAPTEDRAFT_92150, partial [Capitella teleta]
Length = 60
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 101 TQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
T QRR FKA+FE++PKPCRKVRE LA +TGL+VR+VQ
Sbjct: 1 TSQRRKFKAAFEVNPKPCRKVRESLAAETGLTVRVVQ 37
>gi|308220078|gb|ADO22611.1| LIM class homeobox transcription factor Lmx [Mnemiopsis leidyi]
Length = 1123
Score = 62.4 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 39/53 (73%), Gaps = 4/53 (7%)
Query: 89 RRGPKRPRTILTTQQRR----AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RR KRPRT+L++ QR+ FK +F+ +P+PCRK RE L+ TGLSVR+VQ
Sbjct: 914 RREVKRPRTVLSSVQRKEHLSVFKEAFDRTPRPCRKEREKLSSQTGLSVRVVQ 966
>gi|348536381|ref|XP_003455675.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Oreochromis
niloticus]
Length = 399
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 71/184 (38%), Gaps = 50/184 (27%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCR----- 58
V++C C + E+VM+ D+V+H+ CF C C L G+ F +K ++CR
Sbjct: 132 VQRCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDSLVYCRLHFET 191
Query: 59 ----PDYEKEVEMLQGYAQGIPFDLITSSKSHDGRRG----------------------- 91
PDY ++ + A+G L + + ++G
Sbjct: 192 LVQGPDYHPQLNFAELAAKGGGLTLPYFNGTGTAQKGRPRKRKSPAMGIDIPSYNTGCNE 251
Query: 92 ------------------PKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSV 133
KR RT Q R K+ F I+ P K + LA+ TGL+
Sbjct: 252 NDTDHLDRDQQAYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTK 311
Query: 134 RIVQ 137
R++Q
Sbjct: 312 RVLQ 315
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 73 CAGCGGKIS-DRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 126
>gi|82524343|ref|NP_001032320.1| LIM/homeobox protein Lhx9 isoform 2 [Danio rerio]
gi|76667071|dbj|BAE45355.1| LIM homeodomain type transcription factor Lhx9 [Danio rerio]
Length = 395
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 70/182 (38%), Gaps = 48/182 (26%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V++C C + E+VM+ D+V+H+ CF C C L G+ F +K ++CR +E
Sbjct: 130 VQRCAHCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCRVHFET 189
Query: 64 EVE----------MLQGYAQGIPFDLITSSKSHDG----RRGP----------------- 92
++ L A G+ + + G R+ P
Sbjct: 190 LIQGEYHPQLNYAELAAKAGGLALPYFNGTGTRKGRPRKRKSPAMGIDIGSYSSGCNEND 249
Query: 93 -----------------KRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRI 135
KR RT Q R K+ F I+ P K + LA+ TGL+ R+
Sbjct: 250 ADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRV 309
Query: 136 VQ 137
+Q
Sbjct: 310 LQ 311
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 71 CAGCGGKIS-DRYYLHAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 124
>gi|47217395|emb|CAG00755.1| unnamed protein product [Tetraodon nigroviridis]
Length = 343
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 72/184 (39%), Gaps = 50/184 (27%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCR----- 58
V++C C + E+VM+ D+V+H+ CF C C L G+ F +K ++CR
Sbjct: 71 VQRCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDSLVYCRLHFES 130
Query: 59 ----PDYEKEVEMLQGYAQ--GIPFDLITSSKSHD-----GRRGP--------------- 92
PDY ++ + A+ G+P + + R+ P
Sbjct: 131 LVQGPDYHAQLNFAELAAKGGGLPLPYFNGTGTAQKGRPRKRKSPAMGIDISGYSTGCNE 190
Query: 93 -------------------KRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSV 133
KR RT Q R K+ F I+ P K + LA+ TGL+
Sbjct: 191 NDTDHLDRDQQAYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTK 250
Query: 134 RIVQ 137
R++Q
Sbjct: 251 RVLQ 254
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 12 CAGCGGKIS-DRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 65
>gi|328787166|ref|XP_003250891.1| PREDICTED: LIM/homeobox protein Lhx9-like [Apis mellifera]
Length = 390
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ +C C + ELVM+ D V+HV CF C CG+ L +G+ F + G ++CRP Y
Sbjct: 94 LFAGRCSRCRAGISATELVMRARDLVYHVACFTCASCGTPLNKGDYFGQRDGLVYCRPHY 153
Query: 62 E 62
E
Sbjct: 154 E 154
>gi|196013287|ref|XP_002116505.1| hypothetical protein TRIADDRAFT_30944 [Trichoplax adhaerens]
gi|190581096|gb|EDV21175.1| hypothetical protein TRIADDRAFT_30944 [Trichoplax adhaerens]
Length = 265
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 19/156 (12%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
ML+ +C C+ P E +M+ N +H+ CF C C +L G+++ + L+C+
Sbjct: 73 MLFHNRCTKCNRIFEPSEFIMRAKGNPYHIDCFRCHSCMRKLIPGDRYGVDTYILYCKEH 132
Query: 61 YEKEVE-----------MLQGYAQGIPFDLITSSKSH------DGRRGPK--RPRTILTT 101
Y ++ M Q S +H R+G K R RT+L
Sbjct: 133 YLNKMSSSSNHDTLQSTMADSDWQNSDNTDTKSQSTHAKSKQLTSRKGMKGTRIRTVLNE 192
Query: 102 QQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+Q + ++ + +P+P V+E L TGL+ R+++
Sbjct: 193 KQLQTLRSYYASNPRPDSTVKEKLVELTGLNPRVIR 228
>gi|46276325|gb|AAS86421.1| lhx9 [Oryzias latipes]
Length = 237
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 73/184 (39%), Gaps = 50/184 (27%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCR----- 58
V++C C + E+VM+ D+V+H+ CF C C L G+ F +K ++CR
Sbjct: 45 VQRCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDSLVYCRLHFET 104
Query: 59 ----PDYEKEVEMLQGYAQG----IPF--------------------------------- 77
PDY ++ + A+G +P+
Sbjct: 105 LVQGPDYHPQLNFAELAAKGGGLALPYFNGTGTTQKGRPRKRKSPAMGIDIPSYNTGCNE 164
Query: 78 ----DLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSV 133
L +++ + KR RT Q R K+ F I+ P K + LA+ TGL+
Sbjct: 165 NDTDHLDRDQQAYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTK 224
Query: 134 RIVQ 137
R++Q
Sbjct: 225 RVLQ 228
>gi|74355157|gb|AAI03939.1| LIM homeobox 6 [Homo sapiens]
Length = 362
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 4/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ F C C +L GE+F + + ++ CR Y+ +
Sbjct: 130 KCARCGRQIYASDWVRRARGNAYHLA-FACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 188
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 189 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 248
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 249 QKLADMTGLSRRVIQ 263
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 79 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|348536385|ref|XP_003455677.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 3 [Oreochromis
niloticus]
Length = 320
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 71/184 (38%), Gaps = 50/184 (27%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCR----- 58
V++C C + E+VM+ D+V+H+ CF C C L G+ F +K ++CR
Sbjct: 131 VQRCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDSLVYCRLHFET 190
Query: 59 ----PDYEKEVEMLQGYAQGIPFDLITSSKSHDGRRG----------------------- 91
PDY ++ + A+G L + + ++G
Sbjct: 191 LVQGPDYHPQLNFAELAAKGGGLTLPYFNGTGTAQKGRPRKRKSPAMGIDIPSYNTGCNE 250
Query: 92 ------------------PKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSV 133
KR RT Q R K+ F I+ P K + LA+ TGL+
Sbjct: 251 NDTDHLDRDQQAYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTK 310
Query: 134 RIVQ 137
R++Q
Sbjct: 311 RVLQ 314
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 73 CAGCGGKIS-DRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 126
>gi|328705917|ref|XP_001945631.2| PREDICTED: LIM/homeobox protein Lhx5-like [Acyrthosiphon pisum]
Length = 555
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KKC GC++ + P +LV K D VFH+ CF C++C +L GE+ +V++ + C+ DY
Sbjct: 172 YGKKCNGCAQGISPTDLVRKARDKVFHLNCFTCMICRKQLSTGEELYVLEDNKFICKDDY 231
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHD 87
+ QGI D +T S S D
Sbjct: 232 -----ISGKNGQGI--DSLTYSGSED 250
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 63 KEVEMLQGYAQGIP--FDLITSSKS-HDGRRGPKR--PRTILTTQQRRAFKASFEISPKP 117
KE QG G P D T +KS DG G KR PRT + +Q K +F +PKP
Sbjct: 309 KEDSEDQGSLDGDPETRDSQTENKSPDDGNSGSKRRGPRTTIKAKQLEILKTAFSQTPKP 368
Query: 118 CRKVREGLARDTGLSVRIVQ 137
R +RE LA++T L +R++Q
Sbjct: 369 TRHIREQLAKETSLPMRVIQ 388
>gi|432854590|ref|XP_004067976.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Oryzias latipes]
Length = 378
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 73/184 (39%), Gaps = 50/184 (27%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCR----- 58
V++C C + E+VM+ D+V+H+ CF C C L G+ F +K ++CR
Sbjct: 111 VQRCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDSLVYCRLHFET 170
Query: 59 ----PDYEKEVEMLQGYAQG----IPF--------------------------------- 77
PDY ++ + A+G +P+
Sbjct: 171 LVQGPDYHPQLNFAELAAKGGGLALPYFNGTGTTQKGRPRKRKSPAMGIDIPSYNTGCNE 230
Query: 78 ----DLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSV 133
L +++ + KR RT Q R K+ F I+ P K + LA+ TGL+
Sbjct: 231 NDTDHLDRDQQAYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTK 290
Query: 134 RIVQ 137
R++Q
Sbjct: 291 RVLQ 294
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 52 CAGCGGKIS-DRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 105
>gi|322785895|gb|EFZ12514.1| hypothetical protein SINV_13953 [Solenopsis invicta]
Length = 144
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
KC C EK+ +LVM+ + +FHV+CF C +CG L RG ++++QGQ CR D+E E
Sbjct: 76 KCARCMEKISCSDLVMRPVSGLIFHVECFACCMCGQSLPRGAHYILRQGQPICRRDFEHE 135
Query: 65 V 65
+
Sbjct: 136 L 136
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC + D+ VM+ + +H +C C CG+ L I+ +L+CR DYE+
Sbjct: 18 CAGCGRTIA-DKYVMRVAERNYHEECLSCTACGAMLS--HSCFIRDLKLYCRTDYER 71
>gi|308461174|ref|XP_003092882.1| CRE-LIM-7 protein [Caenorhabditis remanei]
gi|308252088|gb|EFO96040.1| CRE-LIM-7 protein [Caenorhabditis remanei]
Length = 462
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 2 LYVKKCLGCSEKLGPDELVMKT-LDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
L+ +C GC + +LVMK NVFH++CF C C RLQ GE+F IK L+CR D
Sbjct: 122 LFTTRCSGCQGEFDKTDLVMKAGPHNVFHLRCFSCTACEKRLQTGEEFQIKNNSLYCRGD 181
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 7 CLGCSEKLGPDELVMKTLDNV-FHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC ++ D M+ N+ FH C CV C L + ++ G +CR DY
Sbjct: 65 CAGCRLEIA-DRYFMRVNPNLEFHTHCLKCVQCSRPLDENQTTFVRNGLTYCRDDY 119
>gi|170592735|ref|XP_001901120.1| Homeobox domain containing protein [Brugia malayi]
gi|158591187|gb|EDP29800.1| Homeobox domain containing protein [Brugia malayi]
Length = 212
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 23/157 (14%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVI--KQGQLFCRPD- 60
KKC+ C E + ++VMK +H CF C C +L GE+FV ++ + CR D
Sbjct: 10 AKKCIRCKEYISKTDMVMKIRTLTYHAACFSCSSCEKKLTVGEEFVFREREDDVLCRVDC 69
Query: 61 ---------------YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPK-----RPRTILT 100
Y +E E + D SS R PK R RT+L
Sbjct: 70 DATNIEQPSSIKTDIYGREDEDGWDGSTLTSLDNQMSSTPPLSLRSPKSDESTRVRTVLN 129
Query: 101 TQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+Q KA + + +P ++E L TGLS R+++
Sbjct: 130 EKQLMTLKACYAANARPDAMMKEHLVEMTGLSPRVIR 166
>gi|357622660|gb|EHJ74086.1| apterous a [Danaus plexippus]
Length = 397
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
K+C C+ + ELVM+ D VFHV CF C +C +RL +G+ F I+ ++CR YE
Sbjct: 123 KRCSRCNTTISASELVMRARDLVFHVHCFSCALCSARLTKGDTFGIRDSAVYCRLHYE 180
>gi|215276334|gb|ACJ65031.1| LHX9 [Xenopus laevis]
Length = 399
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 49/183 (26%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCR----- 58
VK+C C + E+VM+ ++V+H+ CF C C L G+QF +K+ ++CR
Sbjct: 132 VKRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLSTGDQFGMKENLVYCRIHFEL 191
Query: 59 ---PDYEKEVEMLQGYAQG-----IPF-----------------------DLITSS---- 83
D+ +++ + A+G +P+ D++ S
Sbjct: 192 LVQGDFHQQLNYTELSAKGGGIAALPYFSNGTGTVQKGRPRKRKSPALGVDIMNYSSGCN 251
Query: 84 ---------KSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVR 134
+++ + KR RT Q R K+ F I+ P K + LA+ TGL+ R
Sbjct: 252 ENETDLDRDQTYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKR 311
Query: 135 IVQ 137
++Q
Sbjct: 312 VLQ 314
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 73 CAGCGGKIS-DRYYLLAVDKQWHLRCLKCCECKLTLESELTCFAKDGSIYCKEDY 126
>gi|432854592|ref|XP_004067977.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Oryzias latipes]
Length = 380
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 73/186 (39%), Gaps = 52/186 (27%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCR----- 58
V++C C + E+VM+ D+V+H+ CF C C L G+ F +K ++CR
Sbjct: 111 VQRCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDSLVYCRLHFET 170
Query: 59 ----PDYEKEVEMLQGYAQG----IPF--------------------------------- 77
PDY ++ + A+G +P+
Sbjct: 171 LVQGPDYHPQLNFAELAAKGGGLALPYFNGTGTTQKGRPRKRKSPAMGIDIPSYNTALRC 230
Query: 78 ------DLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGL 131
L +++ + KR RT Q R K+ F I+ P K + LA+ TGL
Sbjct: 231 NENDTDHLDRDQQAYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGL 290
Query: 132 SVRIVQ 137
+ R++Q
Sbjct: 291 TKRVLQ 296
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 52 CAGCGGKIS-DRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 105
>gi|340721020|ref|XP_003398925.1| PREDICTED: LIM/homeobox protein Lhx9-like [Bombus terrestris]
Length = 391
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ V +C C + ELVM+ D V+HV CF C CG+ L +G+ F + G ++CRP
Sbjct: 94 LFAVSRCSRCRAGIFATELVMRARDLVYHVACFTCASCGTPLNKGDHFGQRDGLVYCRPH 153
Query: 61 YE 62
YE
Sbjct: 154 YE 155
>gi|268565351|ref|XP_002639418.1| C. briggsae CBR-LIM-7 protein [Caenorhabditis briggsae]
Length = 458
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 75/198 (37%), Gaps = 61/198 (30%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLD-NVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCR- 58
+ +C C + +LVM+ D NVFH+ CF CV C RLQ GE+F IK ++CR
Sbjct: 115 IFKTTRCTRCHGEFDKSDLVMRAGDLNVFHLHCFSCVACEKRLQTGEEFQIKNNNVYCRA 174
Query: 59 --------------PDYEK----------------EVEMLQGYAQGIPFDLITS----SK 84
PD+ K E E + + D TS S
Sbjct: 175 DCQGIERPDRSDSLPDFSKLSNNNNDTNNSSSNFDEDEWDEERSTLTSLDNNTSSPLGSP 234
Query: 85 SHDGRRGP-------------------------KRPRTILTTQQRRAFKASFEISPKPCR 119
DG + P R RT+L QQ + K + + +P
Sbjct: 235 KSDGVQTPLYGHHNSGSGGSSSSCGKKKKDKQATRVRTVLNEQQLKILKDCYSCNSRPDA 294
Query: 120 KVREGLARDTGLSVRIVQ 137
++E L TGL+ R+++
Sbjct: 295 SLKEKLVEMTGLNARVIR 312
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 22/55 (40%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC ++ + D FH C C C L + +K G +C+ DY
Sbjct: 58 CAGCRLEIADRYFLRVHPDMEFHAHCLKCAQCARPLDENQTAFVKDGHTYCKDDY 112
>gi|402593440|gb|EJW87367.1| homeobox domain-containing protein [Wuchereria bancrofti]
Length = 197
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 23/157 (14%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVI--KQGQLFCRPD- 60
KKC+ C E + ++VMK +H CF C C +L GE+FV ++ + CR D
Sbjct: 10 AKKCIRCKEYISKTDMVMKIRTLTYHAACFSCSSCEKKLTVGEEFVFREREDDVLCRVDC 69
Query: 61 ---------------YEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPK-----RPRTILT 100
Y +E E + D SS R PK R RT+L
Sbjct: 70 DTTNIEQPSSIKTDIYGREDEDGWDGSTLTSLDNQMSSTPPLSLRSPKSDESTRVRTVLN 129
Query: 101 TQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+Q KA + + +P ++E L TGLS R+++
Sbjct: 130 EKQLMTLKACYAANARPDAMMKEHLVEMTGLSPRVIR 166
>gi|148224455|ref|NP_001087527.1| LIM/homeobox protein Lhx9 [Xenopus laevis]
gi|82198794|sp|Q68EY3.1|LHX9_XENLA RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|51258697|gb|AAH80067.1| Lhx9 protein [Xenopus laevis]
Length = 331
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 49/183 (26%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCR----- 58
VK+C C + E+VM+ ++V+H+ CF C C L G+QF +K+ ++CR
Sbjct: 131 VKRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLSTGDQFGMKENLVYCRIHFEL 190
Query: 59 ---PDYEKEVEMLQGYAQG-----IPF-----------------------DLITSS---- 83
D+ +++ + A+G +P+ D++ S
Sbjct: 191 LVQGDFHQQLNYTELSAKGGGIAALPYFSNGTGTVQKGRPRKRKSPALGVDIMNYSSGCN 250
Query: 84 ---------KSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVR 134
+++ + KR RT Q R K+ F I+ P K + LA+ TGL+ R
Sbjct: 251 ENETDLDRDQTYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKR 310
Query: 135 IVQ 137
++Q
Sbjct: 311 VLQ 313
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 73 CAGCGGKIS-DRYYLLAVDKQWHLRCLKCCECKLTLESELTCFAKDGSIYCKEDY 126
>gi|307166312|gb|EFN60494.1| LIM/homeobox protein Lhx9 [Camponotus floridanus]
Length = 487
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ V +C C + ELVM+ D V+HV CF C CG+ L +G+ F + G ++CRP
Sbjct: 193 LFAVSRCSRCRAGISASELVMRARDLVYHVACFTCASCGTPLNKGDHFGQRNGLVYCRPH 252
Query: 61 YE 62
YE
Sbjct: 253 YE 254
>gi|170053181|ref|XP_001862556.1| insulin protein enhancer protein isl [Culex quinquefasciatus]
gi|167873811|gb|EDS37194.1| insulin protein enhancer protein isl [Culex quinquefasciatus]
Length = 438
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 73/192 (38%), Gaps = 57/192 (29%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQ-GQLFCRPD 60
L+ KC C ++ VM+ ++H++CF C +C LQ G++F ++ G L+C+ D
Sbjct: 84 LFGTKCDKCGNSFSKNDFVMRAKSKIYHIECFRCSLCMKHLQPGDEFALRDGGALYCKED 143
Query: 61 YEKEVEMLQGYAQGIP-------------------------------------------- 76
++ + Q G+
Sbjct: 144 HDHLEKTSQSLGPGVEPNNNVSNANANQNSSSNNNNNNNSSSNNNNNISLSNNNHSSELG 203
Query: 77 --FDLITSSKSHDGRRG----------PKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
D + S SH RG P R RT+L +Q + + + +P+P ++E
Sbjct: 204 SMSDSGSESGSHKSMRGKGPTGPSDGKPTRVRTVLNEKQLQTLRTCYNANPRPDALMKEQ 263
Query: 125 LARDTGLSVRIV 136
L TGLS R++
Sbjct: 264 LVEMTGLSPRVI 275
>gi|348531406|ref|XP_003453200.1| PREDICTED: LIM/homeobox protein Lhx8-like [Oreochromis niloticus]
Length = 386
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 16/145 (11%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
Y +C C + + V + + FH+ CF C C +L GE+ + + ++FCRP Y+
Sbjct: 163 YGTRCARCGRNIHSSDWVRRARGSTFHLACFSCTSCKRQLSTGEECGLLENRVFCRPHYD 222
Query: 63 KEVEMLQ----------GYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFE 112
+E L+ G + + + K KR RT T Q + + F
Sbjct: 223 IMIENLKRAKENSECMNGQGSDLNYSKLILPKP------AKRARTSFTVDQLQVMQTQFA 276
Query: 113 ISPKPCRKVREGLARDTGLSVRIVQ 137
P + + LA TGLS R++Q
Sbjct: 277 KDNNPDAQTLQKLADRTGLSRRVIQ 301
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + +HV+C C VC + L R I+ ++FC+ DY
Sbjct: 115 DRYLLKVNNLCWHVRCLSCSVCKTSLGRHVSCYIRDKEVFCKLDY 159
>gi|432092293|gb|ELK24915.1| LIM/homeobox protein Lhx9, partial [Myotis davidii]
Length = 420
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 72/183 (39%), Gaps = 49/183 (26%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V++C C + E+VM+ D V+H+ CF C C L G+ F +K G ++CR +E
Sbjct: 71 VQRCARCHLGISASEMVMRARDAVYHLSCFTCSTCSKTLATGDHFGMKDGLVYCRAHFES 130
Query: 64 EVE------------MLQGYAQGIPF----------------------DLIT-SSKSHDG 88
+ +G +P+ D++ SS ++
Sbjct: 131 LLHGEFPAPLSYTELAAKGGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYSSGCNEN 190
Query: 89 RRGP--------------KRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVR 134
P KR RT Q R K+ F I+ P K + LA+ TGL+ R
Sbjct: 191 EADPLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKR 250
Query: 135 IVQ 137
++Q
Sbjct: 251 VLQ 253
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C GC K+ D + +D +H++C C C L+ K G ++C+ DY +
Sbjct: 12 CAGCGGKIA-DRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFS 70
Query: 67 M 67
+
Sbjct: 71 V 71
>gi|326912347|ref|XP_003202514.1| PREDICTED: hypothetical protein LOC100545049, partial [Meleagris
gallopavo]
Length = 391
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 322 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 381
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 382 -MKEGYA 387
>gi|90193535|gb|ABD92360.1| LIM/homeobox protein 6 [Astyanax mexicanus]
Length = 136
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 18 ELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVEMLQGYAQ---G 74
+ V + N + + CF C C +L GE+F + + ++ CR Y+ VE L+ A+ G
Sbjct: 5 DWVRRARGNAYRLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMVENLKRAAESGSG 64
Query: 75 IPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVR 134
+ + S+ + KR RT T +Q + +A F P + + LA TGLS R
Sbjct: 65 LTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRR 124
Query: 135 IVQ 137
++Q
Sbjct: 125 VIQ 127
>gi|170048222|ref|XP_001870660.1| lim homeobox protein [Culex quinquefasciatus]
gi|167870354|gb|EDS33737.1| lim homeobox protein [Culex quinquefasciatus]
Length = 338
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
++C C + ELVM+ D +FHV CF C +CG L+ G+ I++G+LFC Y+ +
Sbjct: 14 RRCARCGSGINASELVMRAKDLIFHVNCFSCAICGQLLRGGDTAGIREGRLFCGEHYDTD 73
Query: 65 V 65
V
Sbjct: 74 V 74
>gi|313239000|emb|CBY13986.1| unnamed protein product [Oikopleura dioica]
Length = 201
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
+C C + P E+ + FH CF CVVC + ++ G+QF++ + +
Sbjct: 40 NQCTRCGFPIKPGEMFQTAKFSKFHWNCFCCVVCNTPIKSGDQFMLTSDSFLTCMAHTNQ 99
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
G +D + S D R KR RT Q A K +F++ P P +
Sbjct: 100 F-WPPSSQDGSHYDYKSIRASFDPRYKQKRIRTSFKNYQINAMKRAFQMKPNPDASDLKT 158
Query: 125 LARDTGLSVRIVQ 137
LA +TGL+ R++Q
Sbjct: 159 LAVETGLTKRVLQ 171
>gi|345132129|gb|AEN75257.1| apterous [Neanthes arenaceodentata]
Length = 420
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
VK+C C + + +ELVM+ ++VFH+ CF C C L G+ F +K ++CR YE
Sbjct: 120 VKRCSRCHQAISANELVMRAREHVFHIGCFTCASCSKALTTGDYFGMKDHLIYCRSHYE- 178
Query: 64 EVEMLQGYAQGIPFDLITSSKSHDGRRGP 92
++QG G P S SH G P
Sbjct: 179 --HIMQGAFIGSP---PPPSLSHGGPMSP 202
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H+ C C C L K G++FC+ DY
Sbjct: 61 CAGCGGKI-IDRYYLLAVDKQWHINCLKCADCHLPLDSELTCFAKDGEIFCKEDY 114
>gi|403286719|ref|XP_003934625.1| PREDICTED: LIM domain only protein 3 [Saimiri boliviensis
boliviensis]
Length = 163
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 94 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 153
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 154 -MKEGYA 159
>gi|260794981|ref|XP_002592485.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
gi|229277705|gb|EEN48496.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
Length = 452
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/190 (27%), Positives = 75/190 (39%), Gaps = 59/190 (31%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
VK+C C + E+VM+ D VFH+ CF+C C L G+Q+ ++ ++CR DYE
Sbjct: 119 VKRCARCHLGISASEMVMRARDLVFHLNCFMCETCNRPLTTGDQYGMRGDTVYCRYDYET 178
Query: 64 ----EVEML----------------------------------------QGYAQGIPFDL 79
E L GY QG D
Sbjct: 179 LVHGEASHLPLGAACSPPQTPTSPTGAQFYNGVGAIHKGRPRKRKSPEPNGYMQG---DN 235
Query: 80 ITSSKSHD-----GRRGP-------KRPRTILTTQQRRAFKASFEISPKPCRKVREGLAR 127
+ + SH+ G P KR RT Q RA K+ F ++ P K + LA+
Sbjct: 236 DSDTSSHNDGYQQGGNSPGHQPQRQKRMRTSFKHHQLRAMKSYFALNHNPDAKDLKQLAQ 295
Query: 128 DTGLSVRIVQ 137
TGL+ R++Q
Sbjct: 296 KTGLTKRVLQ 305
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC ++ D + +D +H+ C C C RL+ K G ++C+ DY +
Sbjct: 60 CAGCGGRI-VDRYYLLAVDKQWHLHCLKCCECKLRLESELTCFAKDGSIYCKQDYYR 115
>gi|345792348|ref|XP_866550.2| PREDICTED: LIM domain only protein 3 isoform 6 [Canis lupus
familiaris]
Length = 163
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 94 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 153
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 154 -MKEGYA 159
>gi|259013283|ref|NP_001158443.1| lim homeobox 2/9 protein [Saccoglossus kowalevskii]
gi|197320559|gb|ACH68441.1| lim homeobox 2/9 protein [Saccoglossus kowalevskii]
Length = 402
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 67/186 (36%), Gaps = 52/186 (27%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
VK+C C + E+VM+ D V+H+ CF C C L G+ F +K ++CR YE
Sbjct: 118 VKRCARCHLGISASEMVMRARDLVYHLSCFTCATCNKALATGDHFGMKDAMVYCRSHYEA 177
Query: 64 --EVEMLQGYA---------------QGIPF----------------------DLITSSK 84
E + G + Q P+ D T
Sbjct: 178 MLHTEHVMGLSPYHHQPSPMPGASPTQHTPYYNGVGAVQKGRPRKRKSPNLENDYHTQGY 237
Query: 85 SHDGRRG-------------PKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGL 131
H+ KR RT Q R K+ F ++ P K + LA+ TGL
Sbjct: 238 PHNDSENHQDLNSDQYTQQRTKRMRTSFKHHQLRTMKSYFALNHNPDAKDLKQLAQKTGL 297
Query: 132 SVRIVQ 137
+ R++
Sbjct: 298 TKRVLH 303
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC ++ D + +D +H+QC C C RL K G ++C+ DY
Sbjct: 59 CAGCGGRI-LDRYYLLAVDKQWHMQCLKCCECKLRLDSELTCFAKDGSIYCKDDY 112
>gi|395850545|ref|XP_003797844.1| PREDICTED: LIM domain only protein 3 [Otolemur garnettii]
Length = 163
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 94 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 153
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 154 -MKEGYA 159
>gi|350404759|ref|XP_003487211.1| PREDICTED: LIM/homeobox protein Lhx9-like [Bombus impatiens]
Length = 441
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ V +C C + ELVM+ D V+HV CF C CG+ L +G+ F + G ++CRP
Sbjct: 144 LFAVSRCSRCRAGIFATELVMRARDLVYHVACFTCASCGTPLNKGDHFGQRDGLVYCRPH 203
Query: 61 YE 62
YE
Sbjct: 204 YE 205
>gi|343790984|ref|NP_001230541.1| LIM domain only protein 3 isoform 3 [Homo sapiens]
gi|332232844|ref|XP_003265612.1| PREDICTED: LIM domain only protein 3-like [Nomascus leucogenys]
gi|332838730|ref|XP_003313578.1| PREDICTED: uncharacterized protein LOC465319 [Pan troglodytes]
gi|397491239|ref|XP_003816580.1| PREDICTED: LIM domain only protein 3-like [Pan paniscus]
gi|426371876|ref|XP_004052866.1| PREDICTED: LIM domain only protein 3-like [Gorilla gorilla gorilla]
gi|194377506|dbj|BAG57701.1| unnamed protein product [Homo sapiens]
gi|221045430|dbj|BAH14392.1| unnamed protein product [Homo sapiens]
Length = 163
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 94 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 153
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 154 -MKEGYA 159
>gi|426225424|ref|XP_004006866.1| PREDICTED: LIM domain only protein 3 [Ovis aries]
Length = 165
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 96 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 155
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 156 -MKEGYA 161
>gi|301766676|ref|XP_002918759.1| PREDICTED: LIM domain only protein 3-like [Ailuropoda melanoleuca]
Length = 163
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 94 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 153
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 154 -MKEGYA 159
>gi|395538520|ref|XP_003771227.1| PREDICTED: LIM domain only protein 3 isoform 2 [Sarcophilus
harrisii]
Length = 163
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 94 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 153
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 154 -MKEGYA 159
>gi|338725822|ref|XP_003365206.1| PREDICTED: LOW QUALITY PROTEIN: LIM domain only protein 3-like
[Equus caballus]
Length = 168
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 99 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 158
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 159 -MKEGYA 164
>gi|426225422|ref|XP_004006865.1| PREDICTED: LIM domain only protein 3 [Ovis aries]
Length = 170
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 101 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 160
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 161 -MKEGYA 166
>gi|443701941|gb|ELU00131.1| hypothetical protein CAPTEDRAFT_168913 [Capitella teleta]
Length = 481
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC+E + P++LV + + VFH++CF C+VC +L GE+ +V+ + + C+ DY
Sbjct: 61 YGTKCGGCAEGISPNDLVRRARNKVFHLKCFTCMVCRKQLSTGEELYVLDENKFICKSDY 120
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 76 PFDLITSSKSHDGR----RGPKR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDT 129
P D+ + + DG +G K+ PRT + +Q K++F +PKP R +RE LA++T
Sbjct: 242 PGDVNKENATEDGEATGGKGSKKRGPRTTIKAKQLEVLKSAFAATPKPTRHIREQLAKET 301
Query: 130 GLSVRIVQ 137
GL +R++Q
Sbjct: 302 GLPMRVIQ 309
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD-YEKEV 65
C GC + + ++ LD +H QC +CV C + L ++ + G+L+CR D Y +
Sbjct: 6 CAGCDRPI-IERFLLTVLDRAWHAQCVLCVDCQAPLT--DKCFSRDGRLYCRQDFYRRYG 62
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G A+GI P DL+ +++
Sbjct: 63 TKCGGCAEGISPNDLVRRARN 83
>gi|441669898|ref|XP_004092149.1| PREDICTED: LIM domain only protein 3-like [Nomascus leucogenys]
Length = 167
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 98 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 157
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 158 -MKEGYA 163
>gi|390356846|ref|XP_785118.3| PREDICTED: LIM/homeobox protein Awh-like [Strongylocentrotus
purpuratus]
Length = 335
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 2/137 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C + + V + +N++H+ CF C C +L GE+F + + ++ C+ Y
Sbjct: 95 FGTKCARCLRNIDASDWVRRARENIYHLACFACDNCKRQLSTGEEFAMIENRVLCKSHYL 154
Query: 63 KEVEMLQGYAQGIPFDLITSSKSHDGR--RGPKRPRTILTTQQRRAFKASFEISPKPCRK 120
+ VE S R + KR RT T +Q +A+F + P +
Sbjct: 155 ELVEATCRSNGDGSGSEYGGEGSGSERPQQKTKRIRTTFTEEQLEVLQANFNVDSNPDGQ 214
Query: 121 VREGLARDTGLSVRIVQ 137
E +A+ TGLS R+ Q
Sbjct: 215 DLERIAQITGLSKRVTQ 231
>gi|296210850|ref|XP_002752233.1| PREDICTED: LIM domain only protein 3-like isoform 1 [Callithrix
jacchus]
Length = 167
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 98 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 157
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 158 -MKEGYA 163
>gi|170579121|ref|XP_001894687.1| Mechanosensory protein 3 [Brugia malayi]
gi|158598615|gb|EDP36477.1| Mechanosensory protein 3, putative [Brugia malayi]
Length = 247
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 72/169 (42%), Gaps = 39/169 (23%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVF-HVQCFVCVVCGSRLQRGEQFVIKQ----------- 52
+C GC + + P E++ K ++F H+ C C+ CG R+ +GEQ I +
Sbjct: 13 NRCAGCQQGIAPTEMIYKVKGDIFYHITCHRCIQCGKRISQGEQICINEISKSIACITHT 72
Query: 53 ---GQLFCRPDYEKEVEMLQGYAQGI------PFDLITS--SKSHDG------------- 88
LF + + + + G+ D TS + SH+
Sbjct: 73 ICSDDLFSIATSTEALCIFETDDSGLLSDASRKLDSSTSFFTHSHETYCYEQSDENNFLK 132
Query: 89 RRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRG PRT + Q F +PKP + VR LA +TGLS+R++Q
Sbjct: 133 RRG---PRTTIKQYQLDVLNRMFMSTPKPSKHVRAKLALETGLSMRVIQ 178
>gi|410046368|ref|XP_003952176.1| PREDICTED: uncharacterized protein LOC465319 [Pan troglodytes]
Length = 167
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 98 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 157
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 158 -MKEGYA 163
>gi|293339636|gb|ADE44110.1| tailup [Megaselia abdita]
Length = 348
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 35/169 (20%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQ-LFCRPD 60
L+ KC C ++ VM+ +FH+ CF C C +L+ G++F ++ G L+C+ D
Sbjct: 46 LFRAKCDKCGNSFSRNDYVMRARTKIFHMDCFRCNTCAIQLKPGQEFALRDGGVLYCKED 105
Query: 61 YE--------------------KEVEMLQGYAQGIPFDLITSSKSH------------DG 88
++ G D + S SH DG
Sbjct: 106 HDILEKSHSQTNISSIETNNNTNLNNNNHSSELGSLSDSGSESGSHKSIREKRPSGPSDG 165
Query: 89 RRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ P R RT+L +Q + + +P+P ++E L TGLS R+++
Sbjct: 166 K--PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 212
>gi|195163209|ref|XP_002022444.1| GL13034 [Drosophila persimilis]
gi|194104436|gb|EDW26479.1| GL13034 [Drosophila persimilis]
Length = 332
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P +LV K D VFH+ CF C +C +L GEQ +V+ + C+ DY
Sbjct: 79 YGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDY 138
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 69 QGYAQGIP---FDLITSSKSHDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVRE 123
QG G P D +KS D G KR PRT + +Q K +F +PKP R +RE
Sbjct: 216 QGSLDGDPDGRGDSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIRE 275
Query: 124 GLARDTGLSVRIVQ 137
LA++TGL +R++Q
Sbjct: 276 QLAKETGLPMRVIQ 289
>gi|170578520|ref|XP_001894442.1| homeobox domain containing protein [Brugia malayi]
gi|158598966|gb|EDP36714.1| homeobox domain containing protein [Brugia malayi]
Length = 248
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 30/165 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIK-QGQLFCRPDY 61
Y K+C C+ L +++VM+ D +FH++CF C VC LQ E F++ G L+C +
Sbjct: 27 YGKRCERCAIILCDEDIVMRANDAIFHLECFTCYVCSIPLQPSELFIMGCNGTLYCNAHF 86
Query: 62 ----------------EKEVEMLQGYAQGIPF-----DLITSSKSHDG--------RRGP 92
E+ ++ G + + D+ +++ S D
Sbjct: 87 GAINPTNDDNSLRTTASSEISLIGGKERCRKWRKSTDDIESTTDSIDCVEEEALSITHKS 146
Query: 93 KRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR RT Q R K+ F ++ P K + LA+ TGL+ R++Q
Sbjct: 147 KRMRTSFKHHQLRTMKSYFNLNHNPDAKDLKQLAQRTGLTKRVLQ 191
>gi|348569402|ref|XP_003470487.1| PREDICTED: LIM domain only protein 3-like [Cavia porcellus]
Length = 156
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 87 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 146
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 147 -MKEGYA 152
>gi|343790987|ref|NP_001230542.1| LIM domain only protein 3 isoform 4 [Homo sapiens]
gi|426371886|ref|XP_004052871.1| PREDICTED: LIM domain only protein 3-like [Gorilla gorilla gorilla]
gi|194378890|dbj|BAG57996.1| unnamed protein product [Homo sapiens]
Length = 167
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 98 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 157
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 158 -MKEGYA 163
>gi|397491241|ref|XP_003816581.1| PREDICTED: LIM domain only protein 3-like [Pan paniscus]
Length = 167
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 98 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 157
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 158 -MKEGYA 163
>gi|56694828|gb|AAW23076.1| Lhx2/9, partial [Oikopleura dioica]
Length = 229
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
+C C + P E+ + FH CF CVVC + ++ G+QF++ + +
Sbjct: 70 NQCTRCGFLIKPGEMFQTAKFSKFHWNCFCCVVCNTPIKSGDQFMLTSDSFLTCMAHTNQ 129
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
G +D + S D R KR RT Q A K +F++ P P +
Sbjct: 130 F-WPPSSQDGSHYDYKSIRASFDPRYKQKRIRTSFKNYQINAMKRAFQMKPNPDASDLKT 188
Query: 125 LARDTGLSVRIVQ 137
LA +TGL+ R++Q
Sbjct: 189 LAVETGLTKRVLQ 201
>gi|395850543|ref|XP_003797843.1| PREDICTED: LIM domain only protein 3 [Otolemur garnettii]
Length = 156
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 87 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 146
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 147 -MKEGYA 152
>gi|307196006|gb|EFN77731.1| LIM/homeobox protein Lhx9 [Harpegnathos saltator]
Length = 433
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ V +C C + ELVM+ + V+HV CF C CG+ L +G+ F + G ++CRP
Sbjct: 114 LFAVSRCSRCRAGISASELVMRARELVYHVACFTCASCGTPLNKGDHFGQRDGLVYCRPH 173
Query: 61 YE 62
YE
Sbjct: 174 YE 175
>gi|343790981|ref|NP_001230540.1| LIM domain only protein 3 isoform 2 [Homo sapiens]
gi|224096300|ref|XP_002196668.1| PREDICTED: LIM domain only protein 3 isoform 2 [Taeniopygia
guttata]
gi|296210852|ref|XP_002752234.1| PREDICTED: LIM domain only protein 3-like isoform 2 [Callithrix
jacchus]
gi|332232836|ref|XP_003265608.1| PREDICTED: LIM domain only protein 3-like [Nomascus leucogenys]
gi|332838722|ref|XP_520773.3| PREDICTED: uncharacterized protein LOC465319 [Pan troglodytes]
gi|345792350|ref|XP_003433617.1| PREDICTED: LIM domain only protein 3 [Canis lupus familiaris]
gi|363728014|ref|XP_416410.3| PREDICTED: LIM domain only protein 3 [Gallus gallus]
gi|395538518|ref|XP_003771226.1| PREDICTED: LIM domain only protein 3 isoform 1 [Sarcophilus
harrisii]
gi|397491237|ref|XP_003816579.1| PREDICTED: LIM domain only protein 3-like [Pan paniscus]
gi|403286717|ref|XP_003934624.1| PREDICTED: LIM domain only protein 3 [Saimiri boliviensis
boliviensis]
gi|410963922|ref|XP_003988507.1| PREDICTED: LIM domain only protein 3 isoform 1 [Felis catus]
gi|426225414|ref|XP_004006861.1| PREDICTED: LIM domain only protein 3 [Ovis aries]
gi|426371864|ref|XP_004052860.1| PREDICTED: LIM domain only protein 3-like [Gorilla gorilla gorilla]
gi|62148930|dbj|BAD93349.1| hypothetical protein [Homo sapiens]
gi|355564057|gb|EHH20557.1| hypothetical protein EGK_03435 [Macaca mulatta]
gi|355785943|gb|EHH66126.1| hypothetical protein EGM_03045 [Macaca fascicularis]
Length = 156
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 87 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 146
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 147 -MKEGYA 152
>gi|21754884|dbj|BAC04582.1| unnamed protein product [Homo sapiens]
Length = 145
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 76 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 135
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 136 -MKEGYA 141
>gi|449271287|gb|EMC81748.1| LIM domain only protein 3, partial [Columba livia]
Length = 147
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 78 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 137
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 138 -MKEGYA 143
>gi|21361802|ref|NP_061110.2| LIM domain only protein 3 isoform 1 [Homo sapiens]
gi|46402195|ref|NP_997105.1| LIM domain only protein 3 [Mus musculus]
gi|47778935|ref|NP_001001395.1| LIM domain only protein 3 isoform 1 [Homo sapiens]
gi|114052438|ref|NP_001039802.1| LIM domain only protein 3 [Bos taurus]
gi|162951801|ref|NP_001106155.1| LIM domain only protein 3 [Sus scrofa]
gi|205830463|ref|NP_001127650.2| LIM domain only protein 3 isoform 2 [Pongo abelii]
gi|205830488|ref|NP_001125415.1| LIM domain only protein 3 isoform 1 [Pongo abelii]
gi|343790975|ref|NP_001230538.1| LIM domain only protein 3 isoform 1 [Homo sapiens]
gi|343790979|ref|NP_001230539.1| LIM domain only protein 3 isoform 1 [Homo sapiens]
gi|388453193|ref|NP_001253235.1| LIM domain only protein 3 [Macaca mulatta]
gi|73997103|ref|XP_866536.1| PREDICTED: LIM domain only protein 3 isoform 5 [Canis lupus
familiaris]
gi|224096294|ref|XP_002196644.1| PREDICTED: LIM domain only protein 3 isoform 1 [Taeniopygia
guttata]
gi|224096298|ref|XP_002196694.1| PREDICTED: LIM domain only protein 3 isoform 3 [Taeniopygia
guttata]
gi|291392560|ref|XP_002712669.1| PREDICTED: LIM domain only 3 [Oryctolagus cuniculus]
gi|296210858|ref|XP_002752237.1| PREDICTED: LIM domain only protein 3-like isoform 5 [Callithrix
jacchus]
gi|296210864|ref|XP_002752240.1| PREDICTED: LIM domain only protein 3-like isoform 8 [Callithrix
jacchus]
gi|327282546|ref|XP_003226003.1| PREDICTED: LIM domain only protein 3-like [Anolis carolinensis]
gi|332232834|ref|XP_003265607.1| PREDICTED: LIM domain only protein 3-like [Nomascus leucogenys]
gi|332232838|ref|XP_003265609.1| PREDICTED: LIM domain only protein 3-like [Nomascus leucogenys]
gi|332232840|ref|XP_003265610.1| PREDICTED: LIM domain only protein 3-like [Nomascus leucogenys]
gi|332232842|ref|XP_003265611.1| PREDICTED: LIM domain only protein 3-like [Nomascus leucogenys]
gi|332232846|ref|XP_003265613.1| PREDICTED: LIM domain only protein 3-like [Nomascus leucogenys]
gi|332232848|ref|XP_003265614.1| PREDICTED: LIM domain only protein 3-like [Nomascus leucogenys]
gi|332232850|ref|XP_003265615.1| PREDICTED: LIM domain only protein 3-like [Nomascus leucogenys]
gi|332838720|ref|XP_003313574.1| PREDICTED: uncharacterized protein LOC465319 [Pan troglodytes]
gi|332838724|ref|XP_003313575.1| PREDICTED: uncharacterized protein LOC465319 [Pan troglodytes]
gi|332838726|ref|XP_003313576.1| PREDICTED: uncharacterized protein LOC465319 [Pan troglodytes]
gi|332838728|ref|XP_003313577.1| PREDICTED: uncharacterized protein LOC465319 [Pan troglodytes]
gi|332838732|ref|XP_003313579.1| PREDICTED: uncharacterized protein LOC465319 [Pan troglodytes]
gi|332838734|ref|XP_003339274.1| PREDICTED: uncharacterized protein LOC465319 [Pan troglodytes]
gi|332838736|ref|XP_003313580.1| PREDICTED: uncharacterized protein LOC465319 [Pan troglodytes]
gi|334348292|ref|XP_001366731.2| PREDICTED: LIM domain only protein 3-like [Monodelphis domestica]
gi|354477495|ref|XP_003500955.1| PREDICTED: LIM domain only protein 3-like [Cricetulus griseus]
gi|392347749|ref|XP_003749911.1| PREDICTED: LIM domain only protein 3-like [Rattus norvegicus]
gi|402885348|ref|XP_003906123.1| PREDICTED: LIM domain only protein 3 [Papio anubis]
gi|410046363|ref|XP_003952174.1| PREDICTED: uncharacterized protein LOC465319 [Pan troglodytes]
gi|410046365|ref|XP_003952175.1| PREDICTED: uncharacterized protein LOC465319 [Pan troglodytes]
gi|410963924|ref|XP_003988508.1| PREDICTED: LIM domain only protein 3 isoform 2 [Felis catus]
gi|410963926|ref|XP_003988509.1| PREDICTED: LIM domain only protein 3 isoform 3 [Felis catus]
gi|426225412|ref|XP_004006860.1| PREDICTED: LIM domain only protein 3 [Ovis aries]
gi|426225416|ref|XP_004006862.1| PREDICTED: LIM domain only protein 3 [Ovis aries]
gi|426225418|ref|XP_004006863.1| PREDICTED: LIM domain only protein 3 [Ovis aries]
gi|426225420|ref|XP_004006864.1| PREDICTED: LIM domain only protein 3 [Ovis aries]
gi|426371866|ref|XP_004052861.1| PREDICTED: LIM domain only protein 3-like [Gorilla gorilla gorilla]
gi|426371868|ref|XP_004052862.1| PREDICTED: LIM domain only protein 3-like [Gorilla gorilla gorilla]
gi|426371870|ref|XP_004052863.1| PREDICTED: LIM domain only protein 3-like [Gorilla gorilla gorilla]
gi|426371872|ref|XP_004052864.1| PREDICTED: LIM domain only protein 3-like [Gorilla gorilla gorilla]
gi|426371874|ref|XP_004052865.1| PREDICTED: LIM domain only protein 3-like [Gorilla gorilla gorilla]
gi|426371878|ref|XP_004052867.1| PREDICTED: LIM domain only protein 3-like [Gorilla gorilla gorilla]
gi|426371880|ref|XP_004052868.1| PREDICTED: LIM domain only protein 3-like [Gorilla gorilla gorilla]
gi|426371882|ref|XP_004052869.1| PREDICTED: LIM domain only protein 3-like [Gorilla gorilla gorilla]
gi|426371884|ref|XP_004052870.1| PREDICTED: LIM domain only protein 3-like [Gorilla gorilla gorilla]
gi|441669886|ref|XP_004092147.1| PREDICTED: LIM domain only protein 3-like [Nomascus leucogenys]
gi|441669892|ref|XP_004092148.1| PREDICTED: LIM domain only protein 3-like [Nomascus leucogenys]
gi|449482200|ref|XP_004174330.1| PREDICTED: LIM domain only protein 3 [Taeniopygia guttata]
gi|34098514|sp|Q8BZL8.1|LMO3_MOUSE RecName: Full=LIM domain only protein 3; Short=LMO-3; AltName:
Full=Neuronal-specific transcription factor DAT1
gi|34098603|sp|Q8TAP4.1|LMO3_HUMAN RecName: Full=LIM domain only protein 3; Short=LMO-3; AltName:
Full=Neuronal-specific transcription factor DAT1;
AltName: Full=Rhombotin-3
gi|75070808|sp|Q5RBW7.1|LMO3_PONAB RecName: Full=LIM domain only protein 3; Short=LMO-3
gi|108860786|sp|Q2KIA3.1|LMO3_BOVIN RecName: Full=LIM domain only protein 3; Short=LMO-3
gi|20070930|gb|AAH26311.1| LIM domain only 3 (rhombotin-like 2) [Homo sapiens]
gi|26329757|dbj|BAC28617.1| unnamed protein product [Mus musculus]
gi|34784567|gb|AAH57086.1| Lmo3 protein [Mus musculus]
gi|55727608|emb|CAH90559.1| hypothetical protein [Pongo abelii]
gi|55727981|emb|CAH90743.1| hypothetical protein [Pongo abelii]
gi|55730077|emb|CAH91763.1| hypothetical protein [Pongo abelii]
gi|55730911|emb|CAH92174.1| hypothetical protein [Pongo abelii]
gi|55733334|emb|CAH93349.1| hypothetical protein [Pongo abelii]
gi|55733457|emb|CAH93407.1| hypothetical protein [Pongo abelii]
gi|62148932|dbj|BAD93350.1| hypothetical protein [Homo sapiens]
gi|71052099|gb|AAH50085.1| LMO3 protein [Homo sapiens]
gi|86438236|gb|AAI12713.1| LIM domain only 3 (rhombotin-like 2) [Bos taurus]
gi|119616777|gb|EAW96371.1| LIM domain only 3 (rhombotin-like 2), isoform CRA_b [Homo sapiens]
gi|119616778|gb|EAW96372.1| LIM domain only 3 (rhombotin-like 2), isoform CRA_b [Homo sapiens]
gi|119616781|gb|EAW96375.1| LIM domain only 3 (rhombotin-like 2), isoform CRA_b [Homo sapiens]
gi|119616782|gb|EAW96376.1| LIM domain only 3 (rhombotin-like 2), isoform CRA_b [Homo sapiens]
gi|119616783|gb|EAW96377.1| LIM domain only 3 (rhombotin-like 2), isoform CRA_b [Homo sapiens]
gi|160858220|dbj|BAF93843.1| LIM domain only 3 [Sus scrofa]
gi|167773937|gb|ABZ92403.1| LIM domain only 3 (rhombotin-like 2) [synthetic construct]
gi|168279025|dbj|BAG11392.1| LIM domain only protein 3 [synthetic construct]
gi|296487271|tpg|DAA29384.1| TPA: LIM domain only protein 3 [Bos taurus]
gi|380783249|gb|AFE63500.1| LIM domain only protein 3 isoform 1 [Macaca mulatta]
gi|380783251|gb|AFE63501.1| LIM domain only protein 3 isoform 1 [Macaca mulatta]
Length = 145
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 76 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 135
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 136 -MKEGYA 141
>gi|344251414|gb|EGW07518.1| LIM domain only protein 3 [Cricetulus griseus]
Length = 149
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 80 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 139
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 140 -MKEGYA 145
>gi|281352404|gb|EFB27988.1| hypothetical protein PANDA_007272 [Ailuropoda melanoleuca]
Length = 149
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 80 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 139
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 140 -MKEGYA 145
>gi|34098349|sp|Q99MB5.2|LMO3_RAT RecName: Full=LIM domain only protein 3; Short=LMO-3; AltName:
Full=Neuronal-specific transcription factor DAT1
Length = 145
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 76 NCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 135
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 136 -MKEGYA 141
>gi|405975209|gb|EKC39790.1| LIM/homeobox protein Lhx5 [Crassostrea gigas]
Length = 471
Score = 59.7 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
KC GC++ + P++LV + + VFH++CF C++C +L GE+ +V+ + + C+ DY
Sbjct: 62 KCAGCTQGISPNDLVRRARNKVFHLKCFTCIICRKQLSTGEELYVMDENRFICKEDY 118
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 59 PDYEKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPC 118
PD ++ E + G SS + RRGP RT + +Q KA+F +PKP
Sbjct: 235 PDGDRSGEEMNDNTNG-------SSNAGAKRRGP---RTTIKAKQLETLKAAFAATPKPT 284
Query: 119 RKVREGLARDTGLSVRIVQ 137
R +RE LA++TGL++R++Q
Sbjct: 285 RHIREQLAQETGLNMRVIQ 303
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
+C C + D ++ LD +H +C C C + L ++ + G+LFCR D+ +
Sbjct: 3 QCAACDRPI-LDRFLLNVLDRAWHAKCVQCSDCKTTLT--DKCFSRDGKLFCRNDFFRRF 59
Query: 66 -EMLQGYAQGI-PFDLITSSKS 85
G QGI P DL+ +++
Sbjct: 60 GTKCAGCTQGISPNDLVRRARN 81
>gi|198469300|ref|XP_001354984.2| GA10943 [Drosophila pseudoobscura pseudoobscura]
gi|198146805|gb|EAL32040.2| GA10943 [Drosophila pseudoobscura pseudoobscura]
Length = 528
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P +LV K D VFH+ CF C +C +L GEQ +V+ + C+ DY
Sbjct: 82 YGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDY 141
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 69 QGYAQGIP---FDLITSSKSHDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVRE 123
QG G P D +KS D G KR PRT + +Q K +F +PKP R +RE
Sbjct: 219 QGSLDGDPDGRGDSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIRE 278
Query: 124 GLARDTGLSVRIVQ 137
LA++TGL +R++Q
Sbjct: 279 QLAKETGLPMRVIQ 292
>gi|341880444|gb|EGT36379.1| CBN-MEC-3 protein [Caenorhabditis brenneri]
Length = 305
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 70/178 (39%), Gaps = 44/178 (24%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLF--CRPD 60
+C GC + + P ++V K VFHV+C C +CG L GEQ ++ + C
Sbjct: 69 AHRCAGCKKGVSPTDMVYKLKAGLVFHVECHFCTLCGRHLSPGEQILVDDTMMTVSCMTH 128
Query: 61 YEKEVE-----------------------------MLQGY---------AQGIPFDLITS 82
Y ++E M G+ A G F+ +
Sbjct: 129 YPPQIEDSCGSTSIVGPSEVPSCSSDASAVVAPYPMDDGFPFQVKKEVDAYGYNFEHYSF 188
Query: 83 SK-SHDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
S D R KR PRT + Q F +PKP + R LA +TGLS+R++Q
Sbjct: 189 SDFCDDDSRMLKRRGPRTTIKQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQ 246
>gi|301605176|ref|XP_002932201.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 398
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 49/183 (26%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCR----- 58
V++C C + E+VM+ ++V+H+ CF C C L G+ F +K+ ++CR
Sbjct: 131 VQRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLSTGDHFGMKENLVYCRIHFEL 190
Query: 59 ---PDYEKEVEMLQGYAQG-----IPF-----------------------DLITSS---- 83
D+ +++ + A+G +P+ D+I S
Sbjct: 191 LVQGDFHQQLNYTELSAKGGGIATLPYFSNGTGTVQKGRPRKRKSPALGVDIINYSSGCN 250
Query: 84 ---------KSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVR 134
+++ + KR RT Q R K+ F I+ P K + LA+ TGL+ R
Sbjct: 251 ENETDLDRDQTYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKR 310
Query: 135 IVQ 137
++Q
Sbjct: 311 VLQ 313
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 72 CAGCGGKIS-DRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 125
>gi|195456664|ref|XP_002075233.1| GK16904 [Drosophila willistoni]
gi|194171318|gb|EDW86219.1| GK16904 [Drosophila willistoni]
Length = 506
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P +LV K D VFH+ CF C +C +L GEQ +V+ + C+ DY
Sbjct: 82 YGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDY 141
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 69 QGYAQGIP---FDLITSSKSHDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVRE 123
QG G P D +KS D G KR PRT + +Q K +F +PKP R +RE
Sbjct: 219 QGSLDGDPDGRGDSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIRE 278
Query: 124 GLARDTGLSVRIVQ 137
LA++TGL +R++Q
Sbjct: 279 QLAKETGLPMRVIQ 292
>gi|21706633|gb|AAH34128.1| Lmo3 protein, partial [Mus musculus]
Length = 112
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 43 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 102
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 103 -MKEGYA 108
>gi|13569715|gb|AAK31207.1|AF353304_1 neuronal specific transcription factor DAT1 [Rattus norvegicus]
Length = 155
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 86 NCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 145
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 146 -MKEGYA 151
>gi|195480019|ref|XP_002101106.1| GE17432 [Drosophila yakuba]
gi|194188630|gb|EDX02214.1| GE17432 [Drosophila yakuba]
Length = 500
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P +LV K D VFH+ CF C +C +L GEQ +V+ + C+ DY
Sbjct: 82 YGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDY 141
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 69 QGYAQGIP---FDLITSSKSHDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVRE 123
QG G P D +KS D G KR PRT + +Q K +F +PKP R +RE
Sbjct: 219 QGSLDGDPDGRGDSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIRE 278
Query: 124 GLARDTGLSVRIVQ 137
LA++TGL +R++Q
Sbjct: 279 QLAKETGLPMRVIQ 292
>gi|195049216|ref|XP_001992673.1| GH24084 [Drosophila grimshawi]
gi|193893514|gb|EDV92380.1| GH24084 [Drosophila grimshawi]
Length = 501
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P +LV K D VFH+ CF C +C +L GEQ +V+ + C+ DY
Sbjct: 82 YGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDY 141
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 69 QGYAQGIP---FDLITSSKSHDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVRE 123
QG G P D +KS D G KR PRT + +Q K +F +PKP R +RE
Sbjct: 219 QGSLDGDPDGRGDSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIRE 278
Query: 124 GLARDTGLSVRIVQ 137
LA++TGL +R++Q
Sbjct: 279 QLAKETGLPMRVIQ 292
>gi|194890894|ref|XP_001977402.1| GG19023 [Drosophila erecta]
gi|190649051|gb|EDV46329.1| GG19023 [Drosophila erecta]
Length = 504
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P +LV K D VFH+ CF C +C +L GEQ +V+ + C+ DY
Sbjct: 82 YGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDY 141
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 69 QGYAQGIP---FDLITSSKSHDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVRE 123
QG G P D +KS D G KR PRT + +Q K +F +PKP R +RE
Sbjct: 219 QGSLDGDPDGRGDSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIRE 278
Query: 124 GLARDTGLSVRIVQ 137
LA++TGL +R++Q
Sbjct: 279 QLAKETGLPMRVIQ 292
>gi|194769270|ref|XP_001966729.1| GF19125 [Drosophila ananassae]
gi|190618250|gb|EDV33774.1| GF19125 [Drosophila ananassae]
Length = 500
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P +LV K D VFH+ CF C +C +L GEQ +V+ + C+ DY
Sbjct: 82 YGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDY 141
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 69 QGYAQGIP---FDLITSSKSHDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVRE 123
QG G P D +KS D G KR PRT + +Q K +F +PKP R +RE
Sbjct: 219 QGSLDGDPDGRGDSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIRE 278
Query: 124 GLARDTGLSVRIVQ 137
LA++TGL +R++Q
Sbjct: 279 QLAKETGLPMRVIQ 292
>gi|18858205|ref|NP_572505.1| Lim1, isoform A [Drosophila melanogaster]
gi|39841014|gb|AAD55417.2|AF181631_1 GH04929p [Drosophila melanogaster]
gi|6252420|dbj|BAA86224.1| dLim1 [Drosophila melanogaster]
gi|22833027|gb|AAF46413.2| Lim1, isoform A [Drosophila melanogaster]
gi|220943666|gb|ACL84376.1| Lim1-PA [synthetic construct]
gi|220953602|gb|ACL89344.1| Lim1-PA [synthetic construct]
Length = 505
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P +LV K D VFH+ CF C +C +L GEQ +V+ + C+ DY
Sbjct: 82 YGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDY 141
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 69 QGYAQGIP---FDLITSSKSHDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVRE 123
QG G P D +KS D G KR PRT + +Q K +F +PKP R +RE
Sbjct: 219 QGSLDGDPDGRGDSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIRE 278
Query: 124 GLARDTGLSVRIVQ 137
LA++TGL +R++Q
Sbjct: 279 QLAKETGLPMRVIQ 292
>gi|195400977|ref|XP_002059092.1| GJ15180 [Drosophila virilis]
gi|194141744|gb|EDW58161.1| GJ15180 [Drosophila virilis]
Length = 498
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P +LV K D VFH+ CF C +C +L GEQ +V+ + C+ DY
Sbjct: 82 YGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDY 141
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 69 QGYAQGIP---FDLITSSKSHDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVRE 123
QG G P D +KS D G KR PRT + +Q K +F +PKP R +RE
Sbjct: 219 QGSLDGDPDGRGDSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIRE 278
Query: 124 GLARDTGLSVRIVQ 137
LA++TGL +R++Q
Sbjct: 279 QLAKETGLPMRVIQ 292
>gi|195130757|ref|XP_002009817.1| GI15570 [Drosophila mojavensis]
gi|193908267|gb|EDW07134.1| GI15570 [Drosophila mojavensis]
Length = 503
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P +LV K D VFH+ CF C +C +L GEQ +V+ + C+ DY
Sbjct: 82 YGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDY 141
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 69 QGYAQGIP---FDLITSSKSHDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVRE 123
QG G P D +KS D G KR PRT + +Q K +F +PKP R +RE
Sbjct: 219 QGSLDGDPDGRGDSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIRE 278
Query: 124 GLARDTGLSVRIVQ 137
LA++TGL +R++Q
Sbjct: 279 QLAKETGLPMRVIQ 292
>gi|7963882|gb|AAF71368.1|AF258348_1 neuronal specific transcription factor DAT1 [Homo sapiens]
Length = 125
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 56 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 115
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 116 -MKEGYA 121
>gi|432876050|ref|XP_004072952.1| PREDICTED: LIM/homeobox protein Lhx2-like [Oryzias latipes]
Length = 380
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 71/189 (37%), Gaps = 55/189 (29%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V++C C + E+VM+ D V+H+ CF C CG L G+ F +K ++CR +E
Sbjct: 133 VQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCGKMLTTGDHFGMKDSLVYCRLHFET 192
Query: 64 ----EVEMLQGYAQGIP----------------------------------------FDL 79
E + +A +P ++
Sbjct: 193 LIQGEYQTNFNHADIVPHKGLGPANTLGLSYFNGLGTVQKGRPRKRKSPGPGAELAAYNA 252
Query: 80 ITSSKSHDGR-----------RGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARD 128
S +DG + KR RT Q R K+ F I+ P K + LA+
Sbjct: 253 ALSCNENDGESMDRDSQYSSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQK 312
Query: 129 TGLSVRIVQ 137
TGL+ R++Q
Sbjct: 313 TGLTKRVLQ 321
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
V C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 71 VALCAGCGRKIA-DRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 127
>gi|351710230|gb|EHB13149.1| LIM domain only protein 3 [Heterocephalus glaber]
Length = 163
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 94 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 153
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 154 -MKEGYA 159
>gi|301605174|ref|XP_002932200.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 331
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 49/183 (26%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCR----- 58
V++C C + E+VM+ ++V+H+ CF C C L G+ F +K+ ++CR
Sbjct: 131 VQRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLSTGDHFGMKENLVYCRIHFEL 190
Query: 59 ---PDYEKEVEMLQGYAQG-----IPF-----------------------DLITSS---- 83
D+ +++ + A+G +P+ D+I S
Sbjct: 191 LVQGDFHQQLNYTELSAKGGGIATLPYFSNGTGTVQKGRPRKRKSPALGVDIINYSSGCN 250
Query: 84 ---------KSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVR 134
+++ + KR RT Q R K+ F I+ P K + LA+ TGL+ R
Sbjct: 251 ENETDLDRDQTYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKR 310
Query: 135 IVQ 137
++Q
Sbjct: 311 VLQ 313
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 72 CAGCGGKI-SDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 125
>gi|443694942|gb|ELT95960.1| hypothetical protein CAPTEDRAFT_39289, partial [Capitella teleta]
Length = 118
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLD---NVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCR 58
LY +C GC + + +LVM++ D V+H CF C+ CG +L +G+Q+ I+ G+LFC+
Sbjct: 57 LYSVRCSGCGQAVTGGQLVMRSGDVGGRVYHASCFCCIACGHQLSKGDQYYIRDGRLFCQ 116
Query: 59 PD 60
D
Sbjct: 117 LD 118
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC + + D ++K +H +C C CG +L K G+L C+ DY +
Sbjct: 1 SACFGCGQAI-ADRFLLKAAGRSWHEECLSCNACGVQLT--SSCFAKDGRLLCKADYAR 56
>gi|270009219|gb|EFA05667.1| lim1 [Tribolium castaneum]
Length = 511
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P +LV K D VFH+ CF C+VC +L GE+ +V+ + C+ DY
Sbjct: 133 YGTKCGGCGQGISPSDLVRKARDKVFHLNCFTCLVCRKQLSTGEELYVLDDNKFICKDDY 192
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 78 DLITSSKS-HDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVR 134
D T +KS D G KR PRT + +Q K +F +PKP R +RE LA++TGL +R
Sbjct: 284 DSQTENKSPDDSSAGSKRRGPRTTIKAKQLEILKTAFSQTPKPTRHIREQLAKETGLPMR 343
Query: 135 IVQ 137
++Q
Sbjct: 344 VIQ 346
>gi|270004905|gb|EFA01353.1| apterous [Tribolium castaneum]
Length = 386
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+K+C C + ELVM+ D VFHV CF C VC S L +G+ F ++ G + CR +E
Sbjct: 52 MKRCARCQATIISSELVMRARDLVFHVHCFSCAVCNSPLTKGDHFGMRDGAVLCRLHFEM 111
Query: 64 EV 65
V
Sbjct: 112 PV 113
>gi|224994808|ref|NP_001139341.1| apterous a [Tribolium castaneum]
gi|224459212|gb|ACN43341.1| apterous a [Tribolium castaneum]
Length = 465
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ +K+C C + ELVM+ D VFHV CF C VC S L +G+ F ++ G + CR
Sbjct: 186 LFGMKRCARCQATIISSELVMRARDLVFHVHCFSCAVCNSPLTKGDHFGMRDGAVLCRLH 245
Query: 61 YEKEV 65
+E V
Sbjct: 246 FEMPV 250
>gi|345132131|gb|AEN75258.1| Lim1 [Neanthes arenaceodentata]
Length = 498
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GCS+ + P++LV + + VFH++CF C+VC +L GE+ +V+ + + C+ DY
Sbjct: 81 FGTKCGGCSQGISPNDLVRRARNKVFHLKCFTCMVCRKQLSTGEELYVLDENKFICKEDY 140
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Query: 89 RRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRGP RT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 299 RRGP---RTTIKAKQLEVLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 344
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C GC + D ++ LD +H +C CV C S L ++ + G+L+CR D+ +
Sbjct: 26 CAGCERPIL-DRFLLNVLDRAWHAKCVQCVECRSNLT--DKCFSRDGKLYCREDFFRRFG 82
Query: 67 M-LQGYAQGI-PFDLITSSKS 85
G +QGI P DL+ +++
Sbjct: 83 TKCGGCSQGISPNDLVRRARN 103
>gi|157119485|ref|XP_001653405.1| insulinprotein enhancer protein isl [Aedes aegypti]
gi|108883188|gb|EAT47413.1| AAEL001500-PA, partial [Aedes aegypti]
Length = 398
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 72/182 (39%), Gaps = 47/182 (25%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQ-GQLFCRPD 60
L+ KC C ++ VM+ ++H++CF C C +L G++F ++ G L+C+ D
Sbjct: 64 LFGTKCDKCGSSFSKNDFVMRAKTKIYHIECFRCSACARQLIPGDEFALRDGGALYCKED 123
Query: 61 YE-----KEVEMLQGYAQ-------------------------------GIPFDLITSSK 84
++ + ++Q G D + S
Sbjct: 124 HDHLEKSNQNSLIQSVEPNNNISSNTNQNSTSNNNNNTSLSNNNHSSELGSMSDSGSESG 183
Query: 85 SHDGRRG----------PKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVR 134
SH RG P R RT+L +Q + + +P+P ++E L TGLS R
Sbjct: 184 SHKSMRGKGPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPR 243
Query: 135 IV 136
++
Sbjct: 244 VI 245
>gi|299115102|dbj|BAJ09782.1| apterous 1 [Daphnia magna]
Length = 468
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V++C C LG +ELVM+ D VFH+ CF C C L +G+ F ++ G ++CR Y
Sbjct: 66 VRRCNRCCLPLGSNELVMRARDAVFHLACFTCAACNQPLTKGDIFGMRDGIVYCRLHY-- 123
Query: 64 EVEMLQ 69
EMLQ
Sbjct: 124 --EMLQ 127
>gi|221104339|ref|XP_002156835.1| PREDICTED: LIM/homeobox protein Awh-like [Hydra magnipapillata]
Length = 203
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 18/146 (12%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC CS + + + + NV+H+ CF C +C +L GE+F + + C+ Y + +
Sbjct: 18 KCSSCSRPIQLTDWIRRAKQNVYHLACFSCDICKRQLSTGEEFAFIEDSILCKLHYVEHL 77
Query: 66 EMLQGYAQGIPFDLITSSKSHDG--------------RRGPKRPRTILTTQQRRAFKASF 111
E+ P L SS + KR RT T +Q +A+F
Sbjct: 78 EL----PASCPVLLTNSSVMENSPELIVDEDQMWIKHENKNKRVRTSFTDEQVLILQANF 133
Query: 112 EISPKPCRKVREGLARDTGLSVRIVQ 137
++ P E +A D L R+ Q
Sbjct: 134 DLDANPDSNELERIAADVSLPKRVTQ 159
>gi|432942706|ref|XP_004083043.1| PREDICTED: LIM domain only protein 3-like [Oryzias latipes]
Length = 156
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 87 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 146
Query: 66 EMLQGYA 72
M GYA
Sbjct: 147 -MKDGYA 152
>gi|225708026|gb|ACO09859.1| LIM/homeobox protein Lhx9 [Osmerus mordax]
Length = 317
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 69/183 (37%), Gaps = 49/183 (26%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V++C C + E+VM+ D+V+H+ CF C C L G+ F +K ++CR +E
Sbjct: 129 VQRCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDSLVYCRVHFET 188
Query: 64 EVE----------MLQGYAQGIPFDLITSSKSHD-----GRRGP---------------- 92
V+ L G G+ + + R+ P
Sbjct: 189 LVQGDYHPQLNYAELAGKGAGLSLPYFNGTGTAQKGRPRKRKSPAMGIDIASYNSGCNEN 248
Query: 93 ------------------KRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVR 134
KR RT Q R K+ F I+ P K + LA+ TGL+ R
Sbjct: 249 EADHLDRDQQSYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKR 308
Query: 135 IVQ 137
++Q
Sbjct: 309 VLQ 311
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 71 CAGCGGKI-SDRYYLLAVDKRWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 124
>gi|321454678|gb|EFX65839.1| hypothetical protein DAPPUDRAFT_65174 [Daphnia pulex]
Length = 291
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
V++C C LG +ELVM+ D VFH+ CF C C L +G+ F ++ G ++CR YE
Sbjct: 77 VRRCNRCCLPLGSNELVMRARDAVFHLACFTCAACNQPLAKGDIFGMRDGIVYCRLHYE 135
>gi|345497659|ref|XP_001601152.2| PREDICTED: LIM/homeobox protein Lhx5-like [Nasonia vitripennis]
Length = 475
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GCS+ + P +LV K D VFH+ CF C+VC ++ GE+ +V+ C+ DY
Sbjct: 60 YGTKCGGCSQGINPSDLVRKARDKVFHLNCFTCLVCRKQMSTGEELYVLDDNTFVCKEDY 119
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 89 RRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRGP RT + +Q K +F +PKP R +RE LA++TGL +R++Q
Sbjct: 241 RRGP---RTTIKAKQLEILKTAFSQTPKPTRHIREQLAKETGLPMRVIQ 286
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C GC + + D+ + LD +H C C C + LQ E+ ++ +LFCR D+ K
Sbjct: 5 CAGCDKPI-MDKFLFNVLDRAWHADCVRCCDCRNPLQ--EKCFSREAKLFCRNDFFKRYG 61
Query: 67 M-LQGYAQGI-PFDLITSSKS 85
G +QGI P DL+ ++
Sbjct: 62 TKCGGCSQGINPSDLVRKARD 82
>gi|324511084|gb|ADY44626.1| LIM/homeobox protein Awh [Ascaris suum]
Length = 384
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C + P + V + V+H+ CF C C +L GE+F ++ +L C+ Y
Sbjct: 176 FGTKCSSCRRLIQPTDWVRRARSFVYHLACFACDQCKRQLSTGEEFALQDCRLLCKQHY- 234
Query: 63 KEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
VE+++G ++ + KR RT +Q + F+I P
Sbjct: 235 --VELVEG-------------ETGQQKAKTKRVRTTFAEEQLAVLQTHFQIDSNPDGADL 279
Query: 123 EGLARDTGLSVRIVQ 137
E +A TGLS R+ Q
Sbjct: 280 ERIATMTGLSKRVTQ 294
>gi|268578911|ref|XP_002644438.1| C. briggsae CBR-LIM-4 protein [Caenorhabditis briggsae]
Length = 346
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 14/131 (10%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C C K+G + V + + V+H+ CF C C +L GE++ +++ L C+ Y +E
Sbjct: 160 CASCGRKIGAADWVRRARNFVYHLACFACNQCKRQLSTGEEYSLQEEHLLCKQHY---LE 216
Query: 67 MLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLA 126
+++G D SS+ + KR RT Q + F P E +A
Sbjct: 217 LVEG-------DSGVSSQ----KAKTKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKIA 265
Query: 127 RDTGLSVRIVQ 137
TGLS R+ Q
Sbjct: 266 NMTGLSKRVTQ 276
>gi|324520352|gb|ADY47616.1| LIM domain only protein 3 [Ascaris suum]
Length = 163
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C C + + ELVM+ NV+H+QCF C +C R G+++ + ++ C+ DYE+ +
Sbjct: 70 CAACDKNIPAFELVMRAKSNVYHLQCFACHICNHRFCIGDKYYLCDNKILCQYDYEERMT 129
Query: 67 MLQGYAQGIPFDLITSS 83
LQ F IT +
Sbjct: 130 FLQAAYNNQSFTEITKN 146
>gi|195354923|ref|XP_002043945.1| GM13699 [Drosophila sechellia]
gi|194129190|gb|EDW51233.1| GM13699 [Drosophila sechellia]
Length = 424
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P +LV K D VFH+ CF C +C +L GEQ +V+ + C+ DY
Sbjct: 82 YGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDY 141
>gi|34733871|gb|AAQ81868.1| LIM homeobox gene protein 2 [Ambystoma mexicanum]
Length = 398
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 72/195 (36%), Gaps = 64/195 (32%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V++C C + E+VM+ D V+H+ CF C C L G+ F +K ++CR +E
Sbjct: 112 VQRCARCHLGISASEMVMRARDLVYHLNCFTCSTCNKMLTTGDHFGMKDSLVYCRLHFE- 170
Query: 64 EVEMLQGYAQ-----------------------GIPF----------------------- 77
++QG Q G+P+
Sbjct: 171 --SLIQGEYQVHFNHTDGGSGKGPGLGGGHNALGLPYYNGVGTXQKGRPRKRKSPGPGAD 228
Query: 78 ---------------DLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
D + +S+ + KR RT Q R K+ F I+ P K
Sbjct: 229 LAAYNAALSCNENDGDHMDRDQSYSSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDL 288
Query: 123 EGLARDTGLSVRIVQ 137
+ LA+ TGL+ R++Q
Sbjct: 289 KQLAQKTGLTKRVLQ 303
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 53 CAGCGGKIS-DRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|328787176|ref|XP_392622.4| PREDICTED: protein apterous [Apis mellifera]
Length = 560
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+K+C C + ELVM+ D VFHV+CF C C L +G+ F ++ G + CR YE
Sbjct: 248 MKRCARCHAAILASELVMRARDLVFHVRCFSCAACAVPLTKGDHFGMRDGAVLCRLHYEM 307
Query: 64 EVEM 67
E+
Sbjct: 308 GAEL 311
>gi|410918403|ref|XP_003972675.1| PREDICTED: LIM domain only protein 3-like [Takifugu rubripes]
Length = 156
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE +
Sbjct: 88 CAACSKLIPAFEMVMRAKDNVYHLDCFACQLCSQRFCVGDKFFLKNNLILCQTDYEDGM- 146
Query: 67 MLQGYA 72
M +GYA
Sbjct: 147 MKEGYA 152
>gi|306020805|gb|ADM79456.1| islet [Cupiennius salei]
Length = 249
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 69/168 (41%), Gaps = 32/168 (19%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C+ L + VM+ ++H+ CF C+ C +L G++F +K+ L C+ ++
Sbjct: 14 LFGIKCARCNVSLSKSDFVMRARSQIYHIDCFRCIACARQLLPGDEFALKEDGLCCKSEH 73
Query: 62 ----------------------EKEVEMLQGYAQGIPFDLITSSKSHDGRR--------- 90
LQ + + + ++ D R
Sbjct: 74 CTLAITDKKPNGHPTPNGHNGTTTNGTTLQMAGNPANAESMQTGRNRDSVRPQVHKQGSD 133
Query: 91 -GPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
P R RT+L +Q + + +P+P ++E L TGLS R+++
Sbjct: 134 HKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 181
>gi|189065489|dbj|BAG35328.1| unnamed protein product [Homo sapiens]
Length = 145
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 76 NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRSCVGDKFFLKNNMILCQTDYEEGL 135
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 136 -MKEGYA 141
>gi|350404757|ref|XP_003487210.1| PREDICTED: protein apterous-like [Bombus impatiens]
Length = 550
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+K+C C + ELVM+ D VFHV+CF C C L +G+ F ++ G + CR YE
Sbjct: 235 MKRCARCHAAILASELVMRARDLVFHVRCFSCAACAVPLTKGDHFGMRDGAVLCRLHYEM 294
Query: 64 EVEM 67
E+
Sbjct: 295 GAEL 298
>gi|322789289|gb|EFZ14609.1| hypothetical protein SINV_08936 [Solenopsis invicta]
Length = 161
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC CS+ ++ VM+ ++HV+CF C C RL+ G++F ++Q LFCR D+
Sbjct: 40 LFGTKCDKCSQCFSKNDYVMRAKTKIYHVECFRCCACMRRLETGDEFALRQDGLFCRHDH 99
Query: 62 EKEVEMLQG-----YAQGIP 76
++L+G A GIP
Sbjct: 100 ----DVLEGGKHCTGAAGIP 115
>gi|383850854|ref|XP_003700989.1| PREDICTED: protein apterous-like [Megachile rotundata]
Length = 620
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+K+C C + ELVM+ D VFHV+CF C C L +G+ F ++ G + CR YE
Sbjct: 305 MKRCARCQAAILASELVMRARDLVFHVRCFSCAACAVPLTKGDHFGMRDGAVLCRLHYEM 364
Query: 64 EVEM 67
E+
Sbjct: 365 GAEL 368
>gi|328925120|dbj|BAK19075.1| Bmptp-Z and Bmap-A fusion protein beta [Bombyx mori]
Length = 444
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
K+C C+ + ELVM+ D VFHV CF C +C + L +G+ + I+ ++CR YE
Sbjct: 192 KRCARCNTVISASELVMRARDLVFHVHCFSCALCNTPLNKGDTYGIRDAAVYCRLHYETM 251
Query: 65 VE 66
E
Sbjct: 252 PE 253
>gi|405976917|gb|EKC41395.1| LIM/homeobox protein Awh [Crassostrea gigas]
Length = 280
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 11/132 (8%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C K+ + V + +NV+H+ CF C C +L GE+F + QL C Y V
Sbjct: 112 KCSKCYRKIQATDWVRRARENVYHLACFACDSCQRQLSTGEEFALSGDQLLCLRHYTSLV 171
Query: 66 EMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGL 125
E D SSK KR R+ T +Q + +A+F I P + +
Sbjct: 172 EG------DTDKDSELSSKPK-----AKRVRSSFTEEQLQILQANFRIESNPDSQELNRI 220
Query: 126 ARDTGLSVRIVQ 137
A G+S R+ Q
Sbjct: 221 AITAGVSRRVAQ 232
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
+ C GC E + D + +H C C VC S L++ E +K ++CR DY E
Sbjct: 50 QACEGCQEVIA-DRYFLHVNGACWHTDCLRCCVCCSSLEQEESCFVKDENIYCRRDYISE 108
>gi|290753134|dbj|BAI79512.1| apterous [Ephoron eophilum]
Length = 248
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+++C C + ELVM+ + VFHVQCF C VC S L +G+ F + +FC+ YE
Sbjct: 15 MRRCGRCQAAIHASELVMRARELVFHVQCFTCSVCNSALTKGDHFGMHGSNVFCQHHYE 73
>gi|158287501|ref|XP_309513.3| AGAP011134-PA [Anopheles gambiae str. PEST]
gi|157019681|gb|EAA05265.3| AGAP011134-PA [Anopheles gambiae str. PEST]
Length = 501
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P +LV K D VFH+ CF C +C ++ GEQ +V+ + C+ DY
Sbjct: 82 YGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQISTGEQLYVLDDNKFICKDDY 141
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 69 QGYAQGIP---FDLITSSKSHDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVRE 123
QG G P D +KS D G KR PRT + +Q K +F +PKP R +RE
Sbjct: 216 QGSLDGDPDCRGDSQAENKSPDDGAGSKRRGPRTTIKAKQLEVLKNAFSQTPKPTRHIRE 275
Query: 124 GLARDTGLSVRIVQ 137
LA++TGL +R++Q
Sbjct: 276 QLAKETGLPMRVIQ 289
>gi|194758653|ref|XP_001961576.1| GF14867 [Drosophila ananassae]
gi|190615273|gb|EDV30797.1| GF14867 [Drosophila ananassae]
Length = 550
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 69/177 (38%), Gaps = 44/177 (24%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQ-GQLFCRPD 60
L+ KC C ++ VM+ +FH++CF C C +L G++F ++ G L+C+ D
Sbjct: 113 LFGTKCDKCGNSFSKNDFVMRAKTKIFHIECFRCSACARQLLPGDEFALRDAGALYCKED 172
Query: 61 YE-----------------------------KEVEMLQGYAQGIPFDLITSSKSH----- 86
++ G D + S SH
Sbjct: 173 HDVLEKSSQSSLTSSSVESNNNISSSNNNNTNLSNNNHSSELGSMSDSGSESGSHKSIRE 232
Query: 87 -------DGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
DG+ P R RT+L +Q + + +P+P ++E L TGLS R++
Sbjct: 233 KRPSGPSDGK--PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVI 287
>gi|328925128|dbj|BAK19079.1| apterous A splicing isoform type B [Bombyx mori]
Length = 398
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
K+C C+ + ELVM+ D VFHV CF C +C + L +G+ + I+ ++CR YE
Sbjct: 124 KRCARCNTVISASELVMRARDLVFHVHCFSCALCNTPLNKGDTYGIRDAAVYCRLHYETM 183
Query: 65 VE 66
E
Sbjct: 184 PE 185
>gi|312074868|ref|XP_003140163.1| Lhx2 protein [Loa loa]
gi|307764674|gb|EFO23908.1| Lhx2 protein [Loa loa]
Length = 372
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 30/165 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIK-QGQLFC---- 57
Y K+C C+ L +++VM+ + +FH++CF C VC + L+ E F++ G L+C
Sbjct: 94 YGKRCERCAAILCDEDIVMRVNEAIFHLECFTCYVCSAPLRPSELFMMGCNGTLYCHVHF 153
Query: 58 ------------RPDYEKEVEMLQGYAQGIPF-----DLITSSKSHDG--------RRGP 92
R E+ +L+G + + D+ +++ S D
Sbjct: 154 GAINITSDDSSLRTTDSSEISVLRGKERCRKWKKSTDDIESTTDSIDCIEEETLNITHKS 213
Query: 93 KRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR RT Q R K+ F ++ P K + LA+ TGL+ R++Q
Sbjct: 214 KRMRTSFKHHQLRTMKSYFNLNHNPDAKDLKQLAQRTGLTKRVLQ 258
>gi|170577993|ref|XP_001894217.1| Homeobox domain containing protein [Brugia malayi]
gi|158599257|gb|EDP36927.1| Homeobox domain containing protein [Brugia malayi]
Length = 452
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 16/132 (12%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C + + V + + V+H+ CF C C +L GE+F ++ +L C+ Y +
Sbjct: 261 KCSSCQRLIHATDWVRRARNFVYHLACFACDQCKRQLSTGEEFALQDCRLLCKQHY---M 317
Query: 66 EMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGL 125
E+++G + + KR RT +Q + F+I P E +
Sbjct: 318 ELIEG-------------ECGQQKAKTKRVRTTFAEEQLAVLQTHFQIDSNPDGADLERI 364
Query: 126 ARDTGLSVRIVQ 137
A TGLS R+ Q
Sbjct: 365 ATMTGLSKRVTQ 376
>gi|258504074|gb|ACV72749.1| MEC-3 [Caenorhabditis remanei]
Length = 291
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 42/175 (24%)
Query: 5 KKCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLF--CRPDY 61
++C GC + + P ++V K VFHV+C C +CG L GEQ ++ + C Y
Sbjct: 72 QRCAGCKKGVSPTDMVYKLKAGLVFHVECHCCSLCGRHLSPGEQILVDDTMMTVSCMTHY 131
Query: 62 EKEVE-------------------------MLQGY-----------AQGIPFDLITSSK- 84
+++ M +G+ A G F+ + S
Sbjct: 132 PPQMDDSCGPPAGTSEVPSCSSDSAIAPYPMDEGFPSAFQVKKEVDAYGYNFEHYSFSDF 191
Query: 85 SHDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
D R KR PRT + Q F +PKP + R LA +TGLS+R++Q
Sbjct: 192 CDDDSRMLKRRGPRTTIKQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQ 246
>gi|258504052|gb|ACV72738.1| MEC-3 [Caenorhabditis remanei]
gi|258504072|gb|ACV72748.1| MEC-3 [Caenorhabditis remanei]
Length = 291
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 42/175 (24%)
Query: 5 KKCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLF--CRPDY 61
++C GC + + P ++V K VFHV+C C +CG L GEQ ++ + C Y
Sbjct: 72 QRCAGCKKGVSPTDMVYKLKAGLVFHVECHCCSLCGRHLSPGEQILVDDTMMTVSCMTHY 131
Query: 62 EKEVE-------------------------MLQGY-----------AQGIPFDLITSSK- 84
+++ M +G+ A G F+ + S
Sbjct: 132 PPQMDDSCGPPAGASEVPSCSSDSAIAPYPMDEGFPSAFQVKKEVDAYGYNFEHYSFSDF 191
Query: 85 SHDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
D R KR PRT + Q F +PKP + R LA +TGLS+R++Q
Sbjct: 192 CDDDSRMLKRRGPRTTIKQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQ 246
>gi|258504064|gb|ACV72744.1| MEC-3 [Caenorhabditis remanei]
gi|258504070|gb|ACV72747.1| MEC-3 [Caenorhabditis remanei]
Length = 274
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 42/174 (24%)
Query: 6 KCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLF--CRPDYE 62
+C GC + + P ++V K VFHV+C C +CG L GEQ ++ + C Y
Sbjct: 56 RCAGCKKGVSPTDMVYKLKAGLVFHVECHCCSLCGRHLSPGEQILVDDTMMTVSCMTHYP 115
Query: 63 KEVE-------------------------MLQGY-----------AQGIPFDLITSSK-S 85
+++ M +G+ A G F+ + S
Sbjct: 116 PQMDDSCGPPAGASEVPSCSSDSAIAPYPMDEGFPSAFQVKKEVDAYGYNFEHYSFSDFC 175
Query: 86 HDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
D R KR PRT + Q F +PKP + R LA +TGLS+R++Q
Sbjct: 176 DDDSRMLKRRGPRTTIKQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQ 229
>gi|328925130|dbj|BAK19080.1| apterous A splicing isoform type C [Bombyx mori]
Length = 385
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
K+C C+ + ELVM+ D VFHV CF C +C + L +G+ + I+ ++CR YE
Sbjct: 124 KRCARCNTVISASELVMRARDLVFHVHCFSCALCNTPLNKGDTYGIRDAAVYCRLHYETM 183
Query: 65 VE 66
E
Sbjct: 184 PE 185
>gi|195114382|ref|XP_002001746.1| GI17017 [Drosophila mojavensis]
gi|193912321|gb|EDW11188.1| GI17017 [Drosophila mojavensis]
Length = 533
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 69/177 (38%), Gaps = 44/177 (24%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQ-GQLFCRPD 60
L+ KC C ++ VM+ +FH++CF C C +L G++F ++ G L+C+ D
Sbjct: 119 LFGTKCDKCGNSFSKNDFVMRAKTKIFHIECFRCSACARQLLPGDEFALRDAGALYCKED 178
Query: 61 YE-----------------------------KEVEMLQGYAQGIPFDLITSSKSH----- 86
++ G D + S SH
Sbjct: 179 HDVLEKSSQSSLTSSSVESNNNISSSNNNNTNLSNNNHSSELGSMSDSGSESGSHKSIRD 238
Query: 87 -------DGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
DG+ P R RT+L +Q + + +P+P ++E L TGLS R++
Sbjct: 239 KRPSGPSDGK--PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVI 293
>gi|328925116|dbj|BAK19073.1| apterous A splicing isoform type A [Bombyx mori]
Length = 376
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
K+C C+ + ELVM+ D VFHV CF C +C + L +G+ + I+ ++CR YE
Sbjct: 124 KRCARCNTVISASELVMRARDLVFHVHCFSCALCNTPLNKGDTYGIRDAAVYCRLHYETM 183
Query: 65 VE 66
E
Sbjct: 184 PE 185
>gi|296194639|ref|XP_002745038.1| PREDICTED: insulin gene enhancer protein ISL-1 [Callithrix jacchus]
Length = 348
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 22/154 (14%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC S ++ VM+ V+H++CF CV + G++F +++ LFCR D+
Sbjct: 74 LYGIKCAXXSIGFSKNDFVMRARSKVYHIECFRCVA-AAPAHPGDEFALREDGLFCRADH 132
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+ V G P L +++ R+ RP RT+L +
Sbjct: 133 D--VVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 190
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
Q + + +P+P ++E L TGLS R++
Sbjct: 191 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 224
>gi|318052393|ref|NP_001187844.1| LIM domain only protein 3 [Ictalurus punctatus]
gi|308324124|gb|ADO29197.1| lim domain only protein 3 [Ictalurus punctatus]
Length = 156
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ +NV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 87 NCAACSKLIPAFEMVMRAKENVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 146
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 147 -MKEGYA 152
>gi|348536393|ref|XP_003455681.1| PREDICTED: LIM domain only protein 3-like [Oreochromis niloticus]
Length = 156
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ +NV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 87 NCAACSKLIPAFEMVMRAKENVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 146
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 147 -MKEGYA 152
>gi|321454677|gb|EFX65838.1| hypothetical protein DAPPUDRAFT_13685 [Daphnia pulex]
Length = 266
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 42/175 (24%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY--- 61
K+C C E L PDELVM+ +++FH +CF C VC + L +G F + +FC+ Y
Sbjct: 63 KQCAKCCETLQPDELVMRGREHLFHTRCFSCHVCQTHLIKGSTFGMVGALIFCQQHYQPG 122
Query: 62 ----------------EKEVEMLQGYAQ---GIP----FDLITSSKSHDGR--------- 89
+ VE G+ Q G P + + + G+
Sbjct: 123 SSAPSGFNGQPLAASQQPPVETYMGHHQEPFGSPRPFEHHALHQQQHYHGQMVNSTGLQQ 182
Query: 90 -------RGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ KR RT Q R K+ F + P K + L++ T LS R++Q
Sbjct: 183 VSSQQQQQKTKRLRTSFKHHQLRMLKSYFATNHNPDAKDLKQLSQKTTLSKRVLQ 237
>gi|395735796|ref|XP_003776642.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein ISL-1
[Pongo abelii]
Length = 382
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 31/165 (18%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 77 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 136
Query: 62 EKEVEMLQGYAQGIPF----------------DLITSSKSHDGRRGPKRP---------- 95
+V G P L +++ R+ RP
Sbjct: 137 --DVVERASLGAGDPLSPLHPCRXLQPSASRRSLFPAAEPISARQPALRPHVHKQPEKTT 194
Query: 96 --RTILTTQQRRAFKASFEISPK-PCRKVREGLARDTGLSVRIVQ 137
RT+L +Q + + + P ++E L TGLS R+++
Sbjct: 195 RVRTVLNEKQLHTLRTCYASKTRGPDALMKEQLVEMTGLSPRVIR 239
>gi|291230776|ref|XP_002735341.1| PREDICTED: LIM domain only 1-like [Saccoglossus kowalevskii]
Length = 311
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C C++ + E+VM+ DNV+H++CF C C R G++F ++ ++ C DYE +
Sbjct: 113 CAACAKVIPAFEMVMRARDNVYHLECFACQQCNHRFCVGDKFYLRNNKILCEEDYEDAMM 172
Query: 67 MLQGY 71
+ G+
Sbjct: 173 LAMGH 177
>gi|332022879|gb|EGI63151.1| LIM/homeobox protein Lhx1 [Acromyrmex echinatior]
Length = 548
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P +LV K D VFH+ CF C+VC ++ GE+ +V+ + C+ DY
Sbjct: 69 YGTKCGGCLQGINPQDLVRKARDKVFHLNCFTCLVCRKQMSTGEELYVLDDNKFVCKQDY 128
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 89 RRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRGP RT + +Q K +F +PKP R +RE LA++TGL +R++Q
Sbjct: 254 RRGP---RTTIKAKQLEILKTAFSSTPKPTRHIREQLAKETGLPMRVIQ 299
>gi|321469905|gb|EFX80883.1| hypothetical protein DAPPUDRAFT_50562 [Daphnia pulex]
Length = 315
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIK-QGQLFCRPD 60
L+ KC C + VM+ ++H++CF C +C +L G++F ++ G LFC+ D
Sbjct: 58 LFGAKCDKCGLGFSRSDFVMRAKSKIYHIECFRCALCQRQLVPGDEFALRDDGNLFCKDD 117
Query: 61 YEKE-----------------VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQ 103
+++ G G DG+ P R RT+L +Q
Sbjct: 118 HDQTNNNNNNSSNQNNNNNNNNGGGMGGVGGSGGVSGGGGGGSDGK--PTRVRTVLNEKQ 175
Query: 104 RRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 176 LHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 209
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C+GC + ++ D +H C CV CG L ++ G+ FCR DY
Sbjct: 1 CVGCGSPIQDQYILRVAPDLEWHASCLKCVECGIFLDENCTCFVRDGKTFCRRDY 55
>gi|47217221|emb|CAF96744.1| unnamed protein product [Tetraodon nigroviridis]
Length = 157
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ DNV+H+ CF C +C R G++F +K + C+ DYE +
Sbjct: 88 NCAVCSKLIPAFEMVMRARDNVYHLDCFACQLCSQRFCVGDKFFLKNNLILCQTDYEDGI 147
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 148 -MKEGYA 153
>gi|258504046|gb|ACV72735.1| MEC-3 [Caenorhabditis remanei]
gi|258504056|gb|ACV72740.1| MEC-3 [Caenorhabditis remanei]
Length = 291
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 42/174 (24%)
Query: 6 KCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLF--CRPDYE 62
+C GC + + P ++V K VFHV+C C +CG L GEQ ++ + C Y
Sbjct: 73 RCAGCKKGVSPTDMVYKLKAGLVFHVECHCCSLCGRHLSPGEQILVDDTMMTVSCMTHYP 132
Query: 63 KEVE-------------------------MLQGY-----------AQGIPFDLITSSK-S 85
+++ M +G+ A G F+ + S
Sbjct: 133 PQMDDSCGPPAGASEVPSCSSDSVIAPYPMDEGFPSAFQVKKEVDAYGYNFEHYSFSDFC 192
Query: 86 HDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
D R KR PRT + Q F +PKP + R LA +TGLS+R++Q
Sbjct: 193 DDDSRMLKRRGPRTTIKQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQ 246
>gi|23893429|emb|CAD12364.1| apterous-2 [Cupiennius salei]
Length = 217
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ VK+C C + +ELVM+ D V+H+ CF C C + L +G+ F ++ ++CR
Sbjct: 2 LFAVKRCARCQRGIFANELVMRARDLVYHLHCFTCAWCNTALTQGDYFGLRDNLVYCRAH 61
Query: 61 YEKEVEMLQGYAQGI 75
YE M+ G G+
Sbjct: 62 YEL---MMHGENFGV 73
>gi|228432|prf||1804264A homeobox protein
Length = 320
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 42/174 (24%)
Query: 6 KCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLF--CRPDYE 62
+C GC + + P ++V K VFHV+C C +CG L GEQ ++ + C Y
Sbjct: 88 RCAGCKKGVSPTDMVYKLKAGLVFHVECHCCSLCGRHLSPGEQILVDDTMMTVSCMTHYP 147
Query: 63 KEVE-------------------------MLQGY-----------AQGIPFDLITSSK-S 85
+++ M +G+ A G F+ + S
Sbjct: 148 PQMDDSCGPPAGTSEVPSCSSDSSIAPYPMDEGFPSAFQVKKEVDAYGYNFEHYSFSDFC 207
Query: 86 HDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
D R KR PRT + Q F +PKP + R LA +TGLS+R++Q
Sbjct: 208 DDDSRMLKRRGPRTTIKQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQ 261
>gi|308492800|ref|XP_003108590.1| CRE-MEC-3 protein [Caenorhabditis remanei]
gi|308248330|gb|EFO92282.1| CRE-MEC-3 protein [Caenorhabditis remanei]
Length = 320
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 42/174 (24%)
Query: 6 KCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLF--CRPDYE 62
+C GC + + P ++V K VFHV+C C +CG L GEQ ++ + C Y
Sbjct: 88 RCAGCKKGVSPTDMVYKLKAGLVFHVECHCCSLCGRHLSPGEQILVDDTMMTVSCMTHYP 147
Query: 63 KEVE-------------------------MLQGY-----------AQGIPFDLITSSK-S 85
+++ M +G+ A G F+ + S
Sbjct: 148 PQMDDSCGPPAGTSEVPSCSSDSAIAPYPMDEGFPSAFQVKKEVDAYGYNFEHYSFSDFC 207
Query: 86 HDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
D R KR PRT + Q F +PKP + R LA +TGLS+R++Q
Sbjct: 208 DDDSRMLKRRGPRTTIKQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQ 261
>gi|444730493|gb|ELW70875.1| LIM/homeobox protein Lhx4 [Tupaia chinensis]
Length = 768
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF CV+C +L G++F +++ G+L C+ DY
Sbjct: 364 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACVICNRQLATGDEFYLMEDGRLVCKEDY 423
Query: 62 E 62
E
Sbjct: 424 E 424
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 87 DGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
D G KRPRT +T +Q K +++ SPKP R VRE L+ +TGL +R+VQ
Sbjct: 530 DSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQ 580
>gi|344240688|gb|EGV96791.1| Insulin gene enhancer protein ISL-1 [Cricetulus griseus]
Length = 257
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 21/135 (15%)
Query: 21 MKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVEMLQGYAQGIPFD-- 78
M+ V+H++CF CV C +L G++F +++ LFCR D+ +V G P
Sbjct: 1 MRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH--DVVERASLGAGDPLSPL 58
Query: 79 -----LITSSKSHDGRRGPKRP------------RTILTTQQRRAFKASFEISPKPCRKV 121
L +++ R+ RP RT+L +Q + + +P+P +
Sbjct: 59 HPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALM 118
Query: 122 REGLARDTGLSVRIV 136
+E L TGLS R++
Sbjct: 119 KEQLVEMTGLSPRVI 133
>gi|195386470|ref|XP_002051927.1| GJ24442 [Drosophila virilis]
gi|194148384|gb|EDW64082.1| GJ24442 [Drosophila virilis]
Length = 529
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/176 (22%), Positives = 68/176 (38%), Gaps = 40/176 (22%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQ-GQLFCRPD 60
L+ KC C ++ VM+ +FH++CF C C +L G++F ++ G L+C+ D
Sbjct: 111 LFGTKCDKCGNSFSKNDFVMRAKTKIFHIECFRCSACARQLLPGDEFALRDAGALYCKED 170
Query: 61 YE-----------------------------KEVEMLQGYAQGIPFDLITSSKSHDGRR- 90
++ G D + S SH R
Sbjct: 171 HDVLEKSSQSSLTSSSVESNNNISSNNNNNTNLSNNNHSSELGSMSDSGSESGSHKSIRE 230
Query: 91 ---------GPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
P R RT+L +Q + + +P+P ++E L TGLS R+++
Sbjct: 231 KRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 286
>gi|258504044|gb|ACV72734.1| MEC-3 [Caenorhabditis remanei]
gi|258504062|gb|ACV72743.1| MEC-3 [Caenorhabditis remanei]
Length = 291
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 42/174 (24%)
Query: 6 KCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLF--CRPDYE 62
+C GC + + P ++V K VFHV+C C +CG L GEQ ++ + C Y
Sbjct: 73 RCAGCKKGVSPTDMVYKLKAGLVFHVECHCCSLCGRHLSPGEQILVDDTMMTVSCMTHYP 132
Query: 63 KEVE-------------------------MLQGY-----------AQGIPFDLITSSK-S 85
+++ M +G+ A G F+ + S
Sbjct: 133 PQMDDSCGPPAGTSEVPSCSSDSVIAPYPMDEGFPSAFQVKKEVDAYGYNFEHYSFSDFC 192
Query: 86 HDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
D R KR PRT + Q F +PKP + R LA +TGLS+R++Q
Sbjct: 193 DDDSRMLKRRGPRTTIKQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQ 246
>gi|395530909|ref|XP_003767529.1| PREDICTED: uncharacterized protein LOC100914829 [Sarcophilus
harrisii]
Length = 659
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 85 SHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
S D G KRPRT +T +Q K +++ SPKP R VRE L+ +TGL +R+VQ
Sbjct: 419 SDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQ 471
>gi|258504048|gb|ACV72736.1| MEC-3 [Caenorhabditis remanei]
gi|258504054|gb|ACV72739.1| MEC-3 [Caenorhabditis remanei]
gi|258504060|gb|ACV72742.1| MEC-3 [Caenorhabditis remanei]
gi|258504066|gb|ACV72745.1| MEC-3 [Caenorhabditis remanei]
Length = 291
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 42/174 (24%)
Query: 6 KCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLF--CRPDYE 62
+C GC + + P ++V K VFHV+C C +CG L GEQ ++ + C Y
Sbjct: 73 RCAGCKKGVSPTDMVYKLKAGLVFHVECHCCSLCGRHLSPGEQILVDDTMMTVSCMTHYP 132
Query: 63 KEVE-------------------------MLQGY-----------AQGIPFDLITSSK-S 85
+++ M +G+ A G F+ + S
Sbjct: 133 PQMDDSCGPPAGASEVPSCSSDSAIAPYPMDEGFPSAFQVKKEVDAYGYNFEHYSFSDFC 192
Query: 86 HDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
D R KR PRT + Q F +PKP + R LA +TGLS+R++Q
Sbjct: 193 DDDSRMLKRRGPRTTIKQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQ 246
>gi|258504050|gb|ACV72737.1| MEC-3 [Caenorhabditis remanei]
gi|258504068|gb|ACV72746.1| MEC-3 [Caenorhabditis remanei]
Length = 291
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 42/174 (24%)
Query: 6 KCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLF--CRPDYE 62
+C GC + + P ++V K VFHV+C C +CG L GEQ ++ + C Y
Sbjct: 73 RCAGCKKGVSPTDMVYKLKAGLVFHVECHCCSLCGRHLSPGEQILVDDTMMTVSCMTHYP 132
Query: 63 KEVE-------------------------MLQGY-----------AQGIPFDLITSSK-S 85
+++ M +G+ A G F+ + S
Sbjct: 133 PQMDDSCGPPAGTSEVPSCSSDSAIAPYPMDEGFPSAFQVKKEVDAYGYNFEHYSFSDFC 192
Query: 86 HDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
D R KR PRT + Q F +PKP + R LA +TGLS+R++Q
Sbjct: 193 DDDSRMLKRRGPRTTIKQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQ 246
>gi|258504058|gb|ACV72741.1| MEC-3 [Caenorhabditis remanei]
Length = 291
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 42/174 (24%)
Query: 6 KCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLF--CRPDYE 62
+C GC + + P ++V K VFHV+C C +CG L GEQ ++ + C Y
Sbjct: 73 RCAGCKKGVSPTDMVYKLKAGLVFHVECHCCSLCGRHLSPGEQILVDDTMMTVSCMTHYP 132
Query: 63 KEVE-------------------------MLQGY-----------AQGIPFDLITSSK-S 85
+++ M +G+ A G F+ + S
Sbjct: 133 PQMDDCCGPPAGTSEVPSCSSDSAIAPYPMDEGFPSAFQVKKEVDAYGYNFEHYSFSDFC 192
Query: 86 HDGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
D R KR PRT + Q F +PKP + R LA +TGLS+R++Q
Sbjct: 193 DDDSRMLKRRGPRTTIKQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQ 246
>gi|66472234|ref|NP_001018575.1| LIM domain only protein 3 [Danio rerio]
gi|82228853|sp|Q503U0.1|LMO3_DANRE RecName: Full=LIM domain only protein 3; Short=LMO-3
gi|63101819|gb|AAH95186.1| LIM domain only 3 [Danio rerio]
Length = 145
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ +NV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 76 NCAACSKLIPAFEMVMRAKENVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 135
Query: 66 EMLQGYA 72
M +GYA
Sbjct: 136 -MKEGYA 141
>gi|71985881|ref|NP_001023112.1| Protein MEC-3, isoform b [Caenorhabditis elegans]
gi|156364|gb|AAA28108.1| mec-3 protein [Caenorhabditis elegans]
gi|33300085|emb|CAE17755.1| Protein MEC-3, isoform b [Caenorhabditis elegans]
Length = 313
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 69/177 (38%), Gaps = 43/177 (24%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLF--CRPD 60
+ +C GC + + P ++V K VFHV+C C +CG L GEQ ++ + C
Sbjct: 78 IHRCAGCKKGVSPTDMVYKLKAGLVFHVECHCCSLCGRHLSPGEQILVDDTMMTVSCMSH 137
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSH---------------------------------- 86
Y +++ A G D+ + S +
Sbjct: 138 YPPQMDDNAPGAIGSAVDIPSCSTENPIAPYPIDESFSSAFQVKKEVDAYGYNFEHYSFS 197
Query: 87 ----DGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
D R KR PRT + Q F +PKP + R LA +TGLS+R++Q
Sbjct: 198 DFCDDDSRMLKRRGPRTTIKQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQ 254
>gi|295656539|gb|ADG26732.1| Lhx1/5 [Platynereis dumerilii]
Length = 291
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GCS+ + P++LV + + VFH++CF C+VC +L GE+ +V+ + + C+ DY
Sbjct: 59 FGTKCGGCSQGISPNDLVRRARNKVFHLKCFTCMVCRKQLSTGEELYVLDENKFICKEDY 118
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +H QC C C + L ++ ++G+L+CR D+ +
Sbjct: 4 CAGCDRPIL-DRFLLNVLDRAWHAQCVQCTECKAHLT--DKCFSREGKLYCRDDFFRRFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G +QGI P DL+ +++
Sbjct: 61 TKCGGCSQGISPNDLVRRARN 81
>gi|71985875|ref|NP_001023111.1| Protein MEC-3, isoform a [Caenorhabditis elegans]
gi|462587|sp|P09088.2|MEC3_CAEEL RecName: Full=Mechanosensory protein 3
gi|156489|gb|AAA50614.1| homeoprotein [Caenorhabditis elegans]
gi|14530395|emb|CAB02885.3| Protein MEC-3, isoform a [Caenorhabditis elegans]
Length = 321
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 69/177 (38%), Gaps = 43/177 (24%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLF--CRPD 60
+ +C GC + + P ++V K VFHV+C C +CG L GEQ ++ + C
Sbjct: 86 IHRCAGCKKGVSPTDMVYKLKAGLVFHVECHCCSLCGRHLSPGEQILVDDTMMTVSCMSH 145
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSH---------------------------------- 86
Y +++ A G D+ + S +
Sbjct: 146 YPPQMDDNAPGAIGSAVDIPSCSTENPIAPYPIDESFSSAFQVKKEVDAYGYNFEHYSFS 205
Query: 87 ----DGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
D R KR PRT + Q F +PKP + R LA +TGLS+R++Q
Sbjct: 206 DFCDDDSRMLKRRGPRTTIKQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQ 262
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKE 64
KC C+E++ D + + + +H C C +C S L E+ K G+++C Y K+
Sbjct: 27 NKCNCCNEQIY-DRYIYRMDNRSYHENCVKCTICESPL--AEKCFWKNGRIYCSQHYYKD 83
Query: 65 --VEMLQGYAQGI-PFDLITSSKS 85
+ G +G+ P D++ K+
Sbjct: 84 HSIHRCAGCKKGVSPTDMVYKLKA 107
>gi|212645986|ref|NP_001129852.1| Protein MEC-3, isoform c [Caenorhabditis elegans]
gi|189310688|emb|CAQ58102.1| Protein MEC-3, isoform c [Caenorhabditis elegans]
Length = 278
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 69/177 (38%), Gaps = 43/177 (24%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDN-VFHVQCFVCVVCGSRLQRGEQFVIKQGQLF--CRPD 60
+ +C GC + + P ++V K VFHV+C C +CG L GEQ ++ + C
Sbjct: 43 IHRCAGCKKGVSPTDMVYKLKAGLVFHVECHCCSLCGRHLSPGEQILVDDTMMTVSCMSH 102
Query: 61 YEKEVEMLQGYAQGIPFDLITSSKSH---------------------------------- 86
Y +++ A G D+ + S +
Sbjct: 103 YPPQMDDNAPGAIGSAVDIPSCSTENPIAPYPIDESFSSAFQVKKEVDAYGYNFEHYSFS 162
Query: 87 ----DGRRGPKR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
D R KR PRT + Q F +PKP + R LA +TGLS+R++Q
Sbjct: 163 DFCDDDSRMLKRRGPRTTIKQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQ 219
>gi|56185681|gb|AAV84105.1| apterous [Euprymna scolopes]
Length = 423
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 72/183 (39%), Gaps = 47/183 (25%)
Query: 1 MLYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPD 60
+ ++C C+ + +LVM+ ++V+H+ CF C C LQ G+ F +++ ++C+
Sbjct: 148 LFSTQRCARCNMGIQSTDLVMRARNHVYHLTCFTCFTCNKALQAGDTFGLREHLVYCQVH 207
Query: 61 YEKEV---------EMLQG---YAQGI--------------------------------- 75
YE +M G Y G+
Sbjct: 208 YENSYHAEYIALSPDMNAGQMPYYNGVGTLQKGRPRKRRSPNISSDEFAHNIGLGADSLD 267
Query: 76 -PFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVR 134
D+I + R KR RT Q R K+ F ++ P K + LA+ TGL+ R
Sbjct: 268 RAGDMIDRDTYQNAPR-QKRMRTSFKHHQLRTLKSYFAVNHNPGAKDLKHLAQKTGLTKR 326
Query: 135 IVQ 137
++Q
Sbjct: 327 VLQ 329
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC + L + + +N +H C C C S L + G +CR DY++
Sbjct: 92 CAGCGD-LITERYYLNVANNAWHFNCLKCYECKSTLDTERSCYERMGNYYCRDDYQR 147
>gi|410929509|ref|XP_003978142.1| PREDICTED: LIM/homeobox protein Lhx2-like [Takifugu rubripes]
Length = 417
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 70/189 (37%), Gaps = 55/189 (29%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V++C C + E+VM+ D V+H+ CF C C L G+ F +K ++CR +E
Sbjct: 133 VQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCSKMLTTGDHFGMKDSLVYCRLHFET 192
Query: 64 ----EVEMLQGYAQGIP----------------------------------------FDL 79
E + +A +P ++
Sbjct: 193 LVQGEYQTHFNHADVVPHKGLGPANTLGLSYFNGVGTVQKGRPRKRKSPGPGAELAAYNA 252
Query: 80 ITSSKSHDGR-----------RGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARD 128
S +DG + KR RT Q R K+ F I+ P K + LA+
Sbjct: 253 ALSCNENDGESMDRDSQYSSTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQK 312
Query: 129 TGLSVRIVQ 137
TGL+ R++Q
Sbjct: 313 TGLTKRVLQ 321
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
V C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 71 VALCAGCGRKI-VDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 127
>gi|17568917|ref|NP_508669.1| Protein LIM-4 [Caenorhabditis elegans]
gi|1621631|gb|AAB17273.1| putative transcription factor LIM-4 [Caenorhabditis elegans]
gi|351063300|emb|CCD71434.1| Protein LIM-4 [Caenorhabditis elegans]
Length = 355
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 14/132 (10%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C + + V + + V+H+ CF C C +L GE++ +++G L C+ + + V
Sbjct: 167 KCASCDRTIQATDWVRRARNYVYHLACFSCNQCKRQLSTGEEYALQEGNLLCKQHFLELV 226
Query: 66 EMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGL 125
E G ++S K+ KR RT Q + F P E +
Sbjct: 227 EGDSG---------VSSQKAK-----TKRVRTTFAEDQLSVLQTYFNRDSNPDGADLEKI 272
Query: 126 ARDTGLSVRIVQ 137
A TGLS R+ Q
Sbjct: 273 ASMTGLSKRVTQ 284
>gi|431921900|gb|ELK19103.1| LIM/homeobox protein Lhx9 [Pteropus alecto]
Length = 479
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 55/186 (29%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V++C C + E+VM+ D+V+H+ CF C C L G+ F +K ++CR +E
Sbjct: 212 VQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCRAHFET 271
Query: 64 EVEMLQG-------YAQ--------GIPF----------------------DLITSSK-- 84
+LQG Y + +P+ D++ S
Sbjct: 272 ---LLQGEYPPQLSYTELAAKSGGLALPYFNGAGTVQKGRPRKRKSPALGVDIVNYSSGC 328
Query: 85 -----SHDGRRGP--------KRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGL 131
H R P KR RT Q R K+ F I+ P K + LA+ TGL
Sbjct: 329 NENEAEHLDRDQPPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGL 388
Query: 132 SVRIVQ 137
+ R++Q
Sbjct: 389 TKRVLQ 394
>gi|356577835|ref|XP_003557027.1| PREDICTED: insulin gene enhancer protein isl-1-like, partial
[Glycine max]
Length = 289
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 52/182 (28%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQ-GQLFCRPD 60
L+ KC C ++ VM+ +FH++CF C C +L G++F ++ G L+C+ D
Sbjct: 64 LFGTKCDKCGNSFSKNDFVMRAKTKIFHIECFRCSSCARQLLPGDEFALRDGGALYCKED 123
Query: 61 YEKEVEMLQGYAQ---------------------------------GIPFDLITSSKSH- 86
+ +ML+ +Q G D + S SH
Sbjct: 124 H----DMLEKSSQSSLTSSSVESNNNISSSNNNNTNLSNNNHSSELGSMSDSGSESGSHK 179
Query: 87 -----------DGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRI 135
DG+ P R RT+L +Q + + +P+P ++E L TGLS R+
Sbjct: 180 SIREKRPSGPSDGK--PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRV 237
Query: 136 VQ 137
++
Sbjct: 238 IR 239
>gi|426384765|ref|XP_004058922.1| PREDICTED: insulin gene enhancer protein ISL-1 [Gorilla gorilla
gorilla]
Length = 393
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 E 62
+
Sbjct: 134 D 134
>gi|45382441|ref|NP_990220.1| LIM/homeobox protein Lhx2 [Gallus gallus]
gi|2340819|dbj|BAA21846.1| LIM homeodomain [Gallus gallus]
Length = 400
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 73/196 (37%), Gaps = 65/196 (33%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V++C C + E+VM+ D V+H+ CF C C L G+ F +K ++CR +E
Sbjct: 113 VQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDNLVYCRLHFET 172
Query: 64 EVEMLQGYAQ------------------------GIPF---------------------- 77
++QG Q G+P+
Sbjct: 173 ---LIQGEYQVHFNHSDVAAGKGPALGAGSANTLGLPYYNGVGTVQKGRPRKRKSPGPGA 229
Query: 78 DLIT-----SSKSHDG-----------RRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
DL S +DG + KR RT Q R K+ F I+ P K
Sbjct: 230 DLAAYNAALSCNENDGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKD 289
Query: 122 REGLARDTGLSVRIVQ 137
+ LA+ TGL+ R++Q
Sbjct: 290 LKQLAQKTGLTKRVLQ 305
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 54 CAGCGGKIS-DRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 107
>gi|190338019|gb|AAI62549.1| LIM homeobox 2 [Danio rerio]
Length = 396
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 71/192 (36%), Gaps = 61/192 (31%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V++C C + E+VM+ D V+H+ CF C C L G+ F +K ++CR +E
Sbjct: 112 VQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCRLHFET 171
Query: 64 EVEMLQG--------------------------YAQGI---------------------P 76
++QG Y G+
Sbjct: 172 ---LIQGDFPTHFNHTDVAPNKGLSSTGPLGLSYYNGVNTVQKGRPRKRKSPGPGADLAA 228
Query: 77 FDLITSSKSHDG-----------RRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGL 125
++ S +DG + KR RT Q R K+ F I+ P K + L
Sbjct: 229 YNAALSCNENDGDAMDRDSQYSSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQL 288
Query: 126 ARDTGLSVRIVQ 137
A+ TGL+ R++Q
Sbjct: 289 AQKTGLTKRVLQ 300
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
V C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 50 VALCAGCGGKIS-DRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|308512521|ref|XP_003118443.1| CRE-LIM-4 protein [Caenorhabditis remanei]
gi|308239089|gb|EFO83041.1| CRE-LIM-4 protein [Caenorhabditis remanei]
Length = 355
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 14/132 (10%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C + + V + + V+H+ CF C C +L GE++ +++G L C+ + +
Sbjct: 167 KCASCERLIQSTDWVRRARNYVYHLACFACNQCKRQLSTGEEYALQEGNLLCKQHF---L 223
Query: 66 EMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGL 125
E+++G D SS+ + KR RT Q + F P E +
Sbjct: 224 ELVEG-------DSGVSSQ----KAKTKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKI 272
Query: 126 ARDTGLSVRIVQ 137
A TGLS R+ Q
Sbjct: 273 ATMTGLSKRVTQ 284
>gi|295798064|emb|CBL87029.1| lim3 protein [Tribolium castaneum]
Length = 223
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 87 DGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
DG + KRPRT +T +Q K ++ SPKP R VRE L++DTGL +R+VQ
Sbjct: 3 DGDQPNKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSQDTGLDMRVVQ 53
>gi|307196005|gb|EFN77730.1| Protein apterous [Harpegnathos saltator]
Length = 319
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+K+C C + ELVM+ + VFHV+CF C C L +G+ F ++ G + CR YE
Sbjct: 5 MKRCARCQAAILASELVMRARELVFHVRCFSCAACAVPLTKGDHFGMRDGAVLCRLHYEM 64
Query: 64 EVEM 67
E+
Sbjct: 65 GAEL 68
>gi|340710825|ref|XP_003393984.1| PREDICTED: LIM/homeobox protein Lhx5-like [Bombus terrestris]
Length = 479
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P +LV K D VFH+ CF C+VC ++ GE+ +V+ + C+ DY
Sbjct: 60 YGTKCSGCLQGISPQDLVRKARDKVFHLNCFTCLVCRKQMSTGEELYVLDDNKFVCKQDY 119
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Query: 89 RRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRGP RT + +Q K++F +PKP R +RE LA++TGL +R++Q
Sbjct: 245 RRGP---RTTIKAKQLEILKSAFSSTPKPTRHIREQLAKETGLPMRVIQ 290
>gi|449268595|gb|EMC79451.1| LIM/homeobox protein Lhx2 [Columba livia]
Length = 416
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 73/196 (37%), Gaps = 65/196 (33%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V++C C + E+VM+ D V+H+ CF C C L G+ F +K ++CR +E
Sbjct: 129 VQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDNLVYCRLHFET 188
Query: 64 EVEMLQGYAQ------------------------GIPF---------------------- 77
++QG Q G+P+
Sbjct: 189 ---LIQGEYQVHFNHADVAAGKGPALGAGSASTLGLPYYNGVGTVQKGRPRKRKSPGPGA 245
Query: 78 DLIT-----SSKSHDG-----------RRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
DL S +DG + KR RT Q R K+ F I+ P K
Sbjct: 246 DLAAYNAALSCNENDGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKD 305
Query: 122 REGLARDTGLSVRIVQ 137
+ LA+ TGL+ R++Q
Sbjct: 306 LKQLAQKTGLTKRVLQ 321
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 53 CAGCGGKIS-DRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|383853574|ref|XP_003702297.1| PREDICTED: LIM/homeobox protein Lhx5-like [Megachile rotundata]
Length = 485
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P +LV K D VFH+ CF C+VC ++ GE+ +V+ + C+ DY
Sbjct: 60 YGTKCSGCLQGISPQDLVRKARDKVFHLNCFTCLVCRKQMSTGEELYVLDDNKFVCKQDY 119
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Query: 89 RRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRGP RT + +Q K++F +PKP R +RE LA++TGL +R++Q
Sbjct: 252 RRGP---RTTIKAKQLEILKSAFSSTPKPTRHIREQLAKETGLPMRVIQ 297
>gi|47214973|emb|CAG01307.1| unnamed protein product [Tetraodon nigroviridis]
Length = 396
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 70/189 (37%), Gaps = 55/189 (29%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V++C C + E+VM+ D V+H+ CF C C L G+ F +K ++CR +E
Sbjct: 112 VQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCSKMLTTGDHFGMKDSLVYCRLHFET 171
Query: 64 EVE-----------------------MLQGYAQGI---------------------PFDL 79
V+ + Y G+ ++
Sbjct: 172 LVQGEYQTHFSHADVVAHKGLGPANTLGLSYFNGVGTVQKGRPRKRKSPGPGAELAAYNA 231
Query: 80 ITSSKSHDGR-----------RGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARD 128
S +DG + KR RT Q R K+ F I+ P K + LA+
Sbjct: 232 ALSCNENDGESMDRDSQYSSTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQK 291
Query: 129 TGLSVRIVQ 137
TGL+ R++Q
Sbjct: 292 TGLTKRVLQ 300
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 53 CAGCGRKI-VDRYYLLAVDKQWHMRCLRCCECKLHLESELTCFSKDGSIYCKEDY 106
>gi|322778971|gb|EFZ09382.1| hypothetical protein SINV_12440 [Solenopsis invicta]
Length = 322
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+K+C C + ELVM+ + VFHV+CF C C L +G+ F ++ G + CR YE
Sbjct: 6 MKRCARCQAAILASELVMRARELVFHVRCFSCAACAVLLTKGDHFGMRDGAVLCRLHYEM 65
Query: 64 EVEM 67
E+
Sbjct: 66 GAEL 69
>gi|402589676|gb|EJW83607.1| beadex/dLMO protein [Wuchereria bancrofti]
Length = 101
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C C + + ELVM+ DNV+H++CF C VC R G++F + + ++ C+ D+E+ V
Sbjct: 18 CAACDKNIPAFELVMRAKDNVYHLRCFACQVCNQRFCIGDKFYLCENKILCQYDFEERVT 77
Query: 67 MLQG 70
Q
Sbjct: 78 FHQA 81
>gi|258504166|gb|ACV72777.1| LIM-4 [Caenorhabditis remanei]
gi|258504168|gb|ACV72778.1| LIM-4 [Caenorhabditis remanei]
gi|258504170|gb|ACV72779.1| LIM-4 [Caenorhabditis remanei]
gi|258504174|gb|ACV72781.1| LIM-4 [Caenorhabditis remanei]
gi|258504176|gb|ACV72782.1| LIM-4 [Caenorhabditis remanei]
gi|258504178|gb|ACV72783.1| LIM-4 [Caenorhabditis remanei]
gi|258504180|gb|ACV72784.1| LIM-4 [Caenorhabditis remanei]
gi|258504182|gb|ACV72785.1| LIM-4 [Caenorhabditis remanei]
gi|258504188|gb|ACV72788.1| LIM-4 [Caenorhabditis remanei]
gi|258504190|gb|ACV72789.1| LIM-4 [Caenorhabditis remanei]
Length = 285
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 14/132 (10%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C + + V + + V+H+ CF C C +L GE++ +++G L C+ + + V
Sbjct: 137 KCASCERLIQSTDWVRRARNYVYHLACFACNQCKRQLSTGEEYALQEGNLLCKQHFLELV 196
Query: 66 EMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGL 125
E G ++S K+ KR RT Q + F P E +
Sbjct: 197 EGDSG---------VSSQKAK-----TKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKI 242
Query: 126 ARDTGLSVRIVQ 137
A TGLS R+ Q
Sbjct: 243 ATMTGLSKRVTQ 254
>gi|449478340|ref|XP_004175607.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Taeniopygia
guttata]
Length = 399
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 73/196 (37%), Gaps = 65/196 (33%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V++C C + E+VM+ D V+H+ CF C C L G+ F +K ++CR +E
Sbjct: 112 VQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDNLVYCRLHFET 171
Query: 64 EVEMLQGYAQ------------------------GIPF---------------------- 77
++QG Q G+P+
Sbjct: 172 ---LIQGEYQVHFNHSDVAAGKGPALGAGSANTLGLPYYNGVGTVQKGRPRKRKSPGPGA 228
Query: 78 DLIT-----SSKSHDG-----------RRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
DL S +DG + KR RT Q R K+ F I+ P K
Sbjct: 229 DLAAYNAALSCNENDGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKD 288
Query: 122 REGLARDTGLSVRIVQ 137
+ LA+ TGL+ R++Q
Sbjct: 289 LKQLAQKTGLTKRVLQ 304
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 53 CAGCGGKIS-DRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|56694838|gb|AAW23081.1| Lim1, partial [Oikopleura dioica]
Length = 272
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 38/168 (22%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFC------- 57
K+CLGC + ++ + FH +C V C + +G F G++ C
Sbjct: 36 KRCLGCQGDINLNDWIQTFAAGTFHHRCIVYKCCNCAVPKGAPFHFVNGEIICPTHMKIS 95
Query: 58 ---------RPDYEKEVEML-----QGYAQGIP--------------FDLITSSKSHDGR 89
+ ++ +++ + Q ++G P + I S S R
Sbjct: 96 NPQARRLFSKQNFLRKITKISRKQEQPASEGDPESSPESTDAQEEAANEKIEISPSKTKR 155
Query: 90 RGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RGP RT + +Q K +F +PKP R +RE L+ +TGLS+R++Q
Sbjct: 156 RGP---RTTIKAKQLEILKNAFLAAPKPTRHMREKLSTETGLSMRVIQ 200
>gi|187171273|ref|NP_001035099.3| LIM/homeobox protein Lhx2 [Danio rerio]
Length = 427
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 71/192 (36%), Gaps = 61/192 (31%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V++C C + E+VM+ D V+H+ CF C C L G+ F +K ++CR +E
Sbjct: 143 VQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCRLHFET 202
Query: 64 EVEMLQG--------------------------YAQGI---------------------P 76
++QG Y G+
Sbjct: 203 ---LIQGDFPTHFNHTDVAPNKGLSSTGPLGLSYYNGVNTVQKGRPRKRKSPGPGADLAA 259
Query: 77 FDLITSSKSHDG-----------RRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGL 125
++ S +DG + KR RT Q R K+ F I+ P K + L
Sbjct: 260 YNAALSCNENDGDPMDRDSQYSSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQL 319
Query: 126 ARDTGLSVRIVQ 137
A+ TGL+ R++Q
Sbjct: 320 AQKTGLTKRVLQ 331
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
V C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 81 VALCAGCGGKIS-DRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 137
>gi|75993708|gb|ABA33890.1| lim homeobox transcription factor 2 [Danio rerio]
Length = 396
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 71/192 (36%), Gaps = 61/192 (31%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V++C C + E+VM+ D V+H+ CF C C L G+ F +K ++CR +E
Sbjct: 112 VQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCRLHFET 171
Query: 64 EVEMLQG--------------------------YAQGI---------------------P 76
++QG Y G+
Sbjct: 172 ---LIQGDFPTHFNHTDVAPNKGLSSTGPLGLSYYNGVNTVQKGRPRKRKSPGPGADLAA 228
Query: 77 FDLITSSKSHDG-----------RRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGL 125
++ S +DG + KR RT Q R K+ F I+ P K + L
Sbjct: 229 YNAALSCNENDGDPMDRDSQYSSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQL 288
Query: 126 ARDTGLSVRIVQ 137
A+ TGL+ R++Q
Sbjct: 289 AQKTGLTKRVLQ 300
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
V C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 50 VALCAGCGGKIS-DRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|258504160|gb|ACV72774.1| LIM-4 [Caenorhabditis remanei]
gi|258504162|gb|ACV72775.1| LIM-4 [Caenorhabditis remanei]
gi|258504164|gb|ACV72776.1| LIM-4 [Caenorhabditis remanei]
gi|258504184|gb|ACV72786.1| LIM-4 [Caenorhabditis remanei]
gi|258504186|gb|ACV72787.1| LIM-4 [Caenorhabditis remanei]
Length = 285
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 14/132 (10%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C + + V + + V+H+ CF C C +L GE++ +++G L C+ + + V
Sbjct: 137 KCASCERLIQSTDWVRRARNYVYHLACFACNQCKRQLSTGEEYALQEGNLLCKQHFLELV 196
Query: 66 EMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGL 125
E G ++S K+ KR RT Q + F P E +
Sbjct: 197 EGDSG---------VSSQKAK-----TKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKI 242
Query: 126 ARDTGLSVRIVQ 137
A TGLS R+ Q
Sbjct: 243 ATMTGLSKRVTQ 254
>gi|224493113|sp|A2I8Z7.1|LHX9_ASTFA RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|121531644|gb|ABM55505.1| LIM/homeobox protein 9 [Astyanax mexicanus]
Length = 377
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 49/183 (26%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V++C C + E+VM+ D+V+H+ CF C C L G+ F +++ ++CR +E
Sbjct: 111 VQRCARCHLGISASEMVMRARDSVYHLSCFTCTSCNKTLTTGDHFGMRENLVYCRAHFES 170
Query: 64 EVE------------MLQGYAQGIPF----------------------DLIT-------S 82
V+ +G +P+ D+ T +
Sbjct: 171 LVQGEYHAPLNYAELAAKGGGLALPYFNGASAVQKGRPRKRKSPAMGIDINTYNSGCNEN 230
Query: 83 SKSH-DGRRGPKRP-------RTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVR 134
H D + P P RT Q R K+ F I+ P K + LA+ TGL+ R
Sbjct: 231 DADHLDRDQQPYPPSQKTKXMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKR 290
Query: 135 IVQ 137
++Q
Sbjct: 291 VLQ 293
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 52 CAGCGSKIS-DRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 105
>gi|172087190|ref|XP_001913137.1| LIM 5 [Oikopleura dioica]
gi|18029264|gb|AAL56442.1| LIM 5-like protein [Oikopleura dioica]
Length = 327
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 68/168 (40%), Gaps = 38/168 (22%)
Query: 5 KKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFC------- 57
K+CLGC + ++ + FH +C V C + +G F G++ C
Sbjct: 36 KRCLGCQGDINLNDWIQTFAAGTFHHRCIVYKCCNCAVPKGAPFHFVNGEIICPTHMKIS 95
Query: 58 ------------------RPDYEKEVEMLQGYAQGIP----------FDLITSSKSHDGR 89
+ +KE +G + P + I S S R
Sbjct: 96 NPQARRLFSKQNFLRKRTKISRKKEQPASEGDPESSPESTDAQEEAANEKIEISPSKTKR 155
Query: 90 RGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RGP RT + +Q K +F +PKP R +RE L+ +TGLS+R++Q
Sbjct: 156 RGP---RTTIKAKQLEILKNAFLAAPKPTRHMREKLSTETGLSMRVIQ 200
>gi|13509267|emb|CAC35214.1| Lhx9 protein [Xenopus laevis]
Length = 217
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 71/181 (39%), Gaps = 49/181 (27%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE- 62
V++C C + E+VM+ ++V+H+ CF C C L G+ F +K+ ++CR +E
Sbjct: 37 VQRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLSTGDHFGMKENLVYCRIHFEL 96
Query: 63 ------------KEVEMLQGYAQGIPF-----------------------DLITSS---- 83
E+ G +P+ D+I S
Sbjct: 97 LVQGDFHQQLNYSELSAKGGGLAALPYFSNGTGTVQKGRPRKRKSQALGVDIINYSSGCN 156
Query: 84 ---------KSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVR 134
+++ + KR RT Q R K+ F I+ P K + LA+ TGL+ R
Sbjct: 157 ENETDLDRDQTYPPSQKSKRMRTSFKHNQLRTMKSYFAINHNPDAKGLKQLAQKTGLTKR 216
Query: 135 I 135
+
Sbjct: 217 V 217
>gi|350396477|ref|XP_003484565.1| PREDICTED: LIM/homeobox protein Lhx5-like [Bombus impatiens]
Length = 419
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P +LV K D VFH+ CF C+VC ++ GE+ +V+ + C+ DY
Sbjct: 60 YGTKCSGCLQGISPQDLVRKARDKVFHLNCFTCLVCRKQMSTGEELYVLDDNKFVCKQDY 119
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Query: 89 RRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRGP RT + +Q K++F +PKP R +RE LA++TGL +R++Q
Sbjct: 238 RRGP---RTTIKAKQLEILKSAFSSTPKPTRHIREQLAKETGLPMRVIQ 283
>gi|147902408|ref|NP_001084116.1| LIM domain only protein 3 [Xenopus laevis]
gi|82225303|sp|Q9YH16.1|LMO3_XENLA RecName: Full=LIM domain only protein 3; Short=LMO-3; AltName:
Full=LIM domain only protein 1; Short=LMO-1; Short=xLMO1
gi|4100164|gb|AAD00763.1| transcription factor XLMO1 [Xenopus laevis]
Length = 156
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ +NV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 87 NCAACSKLIPAFEMVMRAKENVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 146
Query: 66 EMLQGYAQGI 75
M +GY+ +
Sbjct: 147 -MKEGYSAQV 155
>gi|167859076|gb|ACA04473.1| Lim1 [Strongylocentrotus purpuratus]
Length = 480
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P +LV + VFH+ CF C+VC +L GE+ +V+ + Q C+ DY
Sbjct: 60 YGTKCAGCLQGILPSDLVRRARSKVFHLNCFTCMVCRKQLSTGEELYVVDENQFICKEDY 119
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Query: 89 RRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRGP RT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 232 RRGP---RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 277
Score = 42.0 bits (97), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V+ C GC + D ++ LD +HV+C C C ++L E+ ++G+LFC+ D+ +
Sbjct: 2 VQVCAGCERPIL-DRFLLNVLDRPWHVKCVQCCECKAKLT--EKCFSREGKLFCKNDFFR 58
Query: 64 EV-EMLQGYAQGI-PFDLITSSKS 85
G QGI P DL+ ++S
Sbjct: 59 RYGTKCAGCLQGILPSDLVRRARS 82
>gi|47551255|ref|NP_999810.1| Lim homeodomain transcription factor 1 [Strongylocentrotus
purpuratus]
gi|33286229|gb|AAQ01662.1| Lim homeodomain transcription factor 1 [Strongylocentrotus
purpuratus]
Length = 480
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P +LV + VFH+ CF C+VC +L GE+ +V+ + Q C+ DY
Sbjct: 60 YGTKCAGCLQGILPSDLVRRARSKVFHLNCFTCMVCRKQLSTGEELYVVDENQFICKEDY 119
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Query: 89 RRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRGP RT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 232 RRGP---RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 277
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V+ C GC + D ++ LD +HV+C C C ++L E+ ++G+LFC+ D+ +
Sbjct: 2 VQVCAGCERPIL-DRFLLNVLDRPWHVKCVQCCECKAKLT--EKCFSREGKLFCKNDFFR 58
Query: 64 EV-EMLQGYAQGI-PFDLITSSKS 85
G QGI P DL+ ++S
Sbjct: 59 RYGTKCAGCLQGILPSDLVRRARS 82
>gi|10257388|dbj|BAB13725.1| transcription factor HpLim1 [Hemicentrotus pulcherrimus]
Length = 480
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
Y KC GC + + P +LV + VFH+ CF C+VC +L GE+ +V+ + Q C+ DY
Sbjct: 60 YGTKCAGCLQGILPSDLVRRARSKVFHLNCFTCMVCRKQLSTGEELYVVDENQFICKEDY 119
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Query: 89 RRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRGP RT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 232 RRGP---RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 277
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V+ C GC + D ++ LD +HV+C C C ++L E+ ++G+LFC+ D+ +
Sbjct: 2 VQVCAGCERPIL-DRFLLNVLDRPWHVKCVQCCECKAKLT--EKCFSREGKLFCKNDFFR 58
Query: 64 EV-EMLQGYAQGI-PFDLITSSKS 85
G QGI P DL+ ++S
Sbjct: 59 RYGTKCAGCLQGILPSDLVRRARS 82
>gi|443690540|gb|ELT92649.1| hypothetical protein CAPTEDRAFT_219057 [Capitella teleta]
Length = 432
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 37/61 (60%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC CS+ ++ VM+ + ++H+ CF C+ C +L G++F ++ LFC+ D+
Sbjct: 74 LFGTKCARCSQSFSKNDFVMRAKNKIYHIDCFRCIACSRQLIPGDEFALRDDGLFCKADH 133
Query: 62 E 62
+
Sbjct: 134 D 134
>gi|50924940|gb|AAH79734.1| XLMO1 protein [Xenopus laevis]
Length = 145
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
C CS+ + E+VM+ +NV+H+ CF C +C R G++F +K + C+ DYE+ +
Sbjct: 76 NCAACSKLIPAFEMVMRAKENVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEEGL 135
Query: 66 EMLQGYAQGI 75
M +GY+ +
Sbjct: 136 -MKEGYSAQV 144
>gi|62955397|ref|NP_001017710.1| LIM/homeobox protein Lhx9 isoform 1 [Danio rerio]
gi|62205415|gb|AAH93258.1| LIM homeobox 9 [Danio rerio]
Length = 330
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 69/187 (36%), Gaps = 49/187 (26%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V++C C + E+VM+ D+V+H+ CF C C L G+ F +K ++CR +E
Sbjct: 130 VQRCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCRVHFET 189
Query: 64 EVE------------MLQGYAQGIPFDLITSSKSHDGRRGPKRP---------------- 95
++ +G +P+ T + R K P
Sbjct: 190 LIQGEYHPQLNYAELAAKGGGLALPYFNGTGTVQKGRPRKRKSPAMGIDIGSYSSGCNEN 249
Query: 96 ---------------------RTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVR 134
RT Q R K+ F I+ P K + LA+ TGL+ R
Sbjct: 250 DADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKR 309
Query: 135 IVQSRPI 141
++Q I
Sbjct: 310 VLQGEQI 316
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 71 CAGCGGKIS-DRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 124
>gi|405963181|gb|EKC28778.1| LIM domain transcription factor LMO4.1 [Crassostrea gigas]
Length = 165
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC + + +E+VM+T NV+H++CF C C L G++F + G + C DY K
Sbjct: 85 SCAGCGQSIPANEMVMRTQGNVYHLKCFNCYTCNMPLSPGDRFGVVNGNIICENDYSK 142
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+K C GC ++ D ++ ++ +H C C C + L++ + G + C+ DY +
Sbjct: 20 IKACAGCGSRI-SDRFLLHAMERFWHTACLKCSCCQTNLEQLGSCFTRAGMILCKNDYMR 78
Query: 64 ---EVEMLQGYAQGIPFD 78
G Q IP +
Sbjct: 79 LFCSGGSCAGCGQSIPAN 96
>gi|301618805|ref|XP_002938795.1| PREDICTED: LIM/homeobox protein Lhx2-like [Xenopus (Silurana)
tropicalis]
Length = 419
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 64/195 (32%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V++C C + E+VM+ D V+H+ CF C C L G+ F +K ++CR +E
Sbjct: 133 VQRCARCHLGISASEMVMRARDLVYHLNCFTCNTCNKMLTTGDHFGMKDNLVYCRLHFET 192
Query: 64 EVEMLQGYAQ-----------------------GIPF----------------------D 78
++QG Q G+P+ D
Sbjct: 193 ---LIQGEYQVHFSHSDVASGKGSGLGTGAASLGLPYYNGVGTVQKGRPRKRKSPGPGAD 249
Query: 79 LIT-----SSKSHDG-----------RRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
L S +DG + KR RT Q R K+ F I+ P K
Sbjct: 250 LAAYNAALSCNENDGDHMDRDQQYTPNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDL 309
Query: 123 EGLARDTGLSVRIVQ 137
+ LA+ TGL+ R++Q
Sbjct: 310 KQLAQKTGLTKRVLQ 324
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 74 CAGCGGKIS-DRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 127
>gi|291290877|ref|NP_001167469.1| LIM homeobox 2 [Xenopus laevis]
gi|37720481|gb|AAN41461.1| LIM homeobox protein 2 [Xenopus laevis]
Length = 419
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 64/195 (32%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
V++C C + E+VM+ D V+H+ CF C C L G+ F +K ++CR +E
Sbjct: 133 VQRCARCHLGISASEMVMRARDLVYHLNCFTCNTCNKMLTTGDHFGMKDNLVYCRLHFET 192
Query: 64 EVEMLQGYAQ-----------------------GIPF----------------------D 78
++QG Q G+P+ D
Sbjct: 193 ---LIQGEYQVHFNHSDVASGKGSGLGTGAASLGLPYYNGVGTVQKGRPRKRKSPGSGAD 249
Query: 79 LIT-----SSKSHDG-----------RRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
L S +DG + KR RT Q R K+ F I+ P K
Sbjct: 250 LAAYNAALSCNENDGDHMDRDQQYTSNQKSKRMRTSFKHHQLRTMKSYFAINHNPDAKDL 309
Query: 123 EGLARDTGLSVRIVQ 137
+ LA+ TGL+ R++Q
Sbjct: 310 KQLAQKTGLTKRVLQ 324
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C GC K+ D + +D +H++C C C L+ K G ++C+ DY
Sbjct: 74 CAGCGGKI-SDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 127
>gi|380027050|ref|XP_003697249.1| PREDICTED: protein apterous-like [Apis florea]
Length = 555
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
+K+C C + ELVM+ + VFHV+CF C C L +G+ F ++ G + CR YE
Sbjct: 246 MKRCARCHAAILASELVMRARELVFHVRCFSCAACAVPLTKGDHFGMRDGAVLCRLHYEM 305
Query: 64 EVEM 67
E+
Sbjct: 306 GAEL 309
>gi|358335730|dbj|GAA54362.1| LIM domain transcription factor LMO4-B [Clonorchis sinensis]
Length = 303
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE---- 62
C C +K+ PDELVM+ ++V+HV+CF C C ++L G++ + +G LFC ++
Sbjct: 69 CAKCRQKIPPDELVMRCQESVYHVRCFCCFHCHAQLNPGDKVCLVEGNLFCELEFPQLFS 128
Query: 63 ----KEVEMLQGYAQGIPFDLITSSKSHDGRRG 91
K ++ Q I L+TS+ D R
Sbjct: 129 TTTVKWSPTMKPPNQAISNLLMTSTNQTDLLRN 161
>gi|392927445|ref|NP_001257168.1| Protein TTX-3, isoform a [Caenorhabditis elegans]
gi|2795770|gb|AAB97099.1| putative transcription factor TTX-3 [Caenorhabditis elegans]
gi|13548319|emb|CAB03956.3| Protein TTX-3, isoform a [Caenorhabditis elegans]
Length = 409
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 66/171 (38%), Gaps = 36/171 (21%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIK-QGQLFCRPDY 61
Y K C C L +++VMK + +FH CFVC +CG +L G+ + + QG L+C Y
Sbjct: 167 YQKCCRKCEIPLNREDMVMKAKEMIFHHACFVCFICGIKLNPGDYYTMSPQGHLYCHAHY 226
Query: 62 EK----------------------------EVEMLQGYAQGIPFDLITSSKSH------- 86
+ P + T +++
Sbjct: 227 NAVRSTVLCEEAAVATVPAVVAPPPPPPTTTTAPPPAAPEQPPREASTEAEASTDEDGNG 286
Query: 87 DGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
G + KR RT Q RA K F ++ P K + LA T L+ R++Q
Sbjct: 287 SGSQRSKRMRTSFKHHQLRAMKTYFALNHNPDAKDLKQLAAKTNLTKRVLQ 337
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.140 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,100,894,809
Number of Sequences: 23463169
Number of extensions: 75942249
Number of successful extensions: 210531
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2008
Number of HSP's successfully gapped in prelim test: 2374
Number of HSP's that attempted gapping in prelim test: 202240
Number of HSP's gapped (non-prelim): 9132
length of query: 143
length of database: 8,064,228,071
effective HSP length: 107
effective length of query: 36
effective length of database: 9,848,636,284
effective search space: 354550906224
effective search space used: 354550906224
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 71 (32.0 bits)