BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15437
(143 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P53413|LMX1B_CHICK LIM/homeobox protein LMX-1.2 OS=Gallus gallus GN=LMX1B PE=2 SV=1
Length = 377
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 101/154 (65%), Gaps = 18/154 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 87 LFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDY 146
Query: 62 EKEVEML----------------QGYAQGIPFDLITSSKSHDGR--RGPKRPRTILTTQQ 103
EKE ++L G + + S DG+ R PKRPRTILTTQQ
Sbjct: 147 EKEKDLLSSVSPDDSDSVKSDDEDGDVKPTKGQVTQGKGSDDGKDPRRPKRPRTILTTQQ 206
Query: 104 RRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 207 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC + D +M+ ++ +H +C C VC L F + +L+C+ DY++
Sbjct: 33 CEGCQRPIS-DRFLMRVNESSWHEECLQCAVCQQALTTSCYF--RDRKLYCKQDYQQ 86
>sp|Q8UVR3|LMX1B_XENLA LIM homeobox transcription factor 1-beta.1 OS=Xenopus laevis
GN=lmx1b.1 PE=2 SV=1
Length = 400
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 102/154 (66%), Gaps = 18/154 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 110 LFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDY 169
Query: 62 EKEVEML----------------QGYAQGIPFDLITSSKSHDGR--RGPKRPRTILTTQQ 103
EKE ++L +G + + S DG+ R PKRPRTILTTQQ
Sbjct: 170 EKEKDLLSSGSPDDSDSVKSDDEEGDVKPGKGRVNQGKGSDDGKDPRRPKRPRTILTTQQ 229
Query: 104 RRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 230 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 263
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
C GC + D +M+ + +H +C C VC L F + +LFC+ DY++
Sbjct: 56 CEGCQRPIS-DRFLMRVNEASWHEECLQCTVCQQPLTTSCYF--RDRKLFCKQDYQQ 109
>sp|Q9JKU8|LMX1A_MOUSE LIM homeobox transcription factor 1-alpha OS=Mus musculus GN=Lmx1a
PE=2 SV=1
Length = 382
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 99/152 (65%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D + KS G + PKRPRTILTTQQRR
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGASEDGKDHKRPKRPRTILTTQQRR 208
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 209 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>sp|Q04650|LMX1A_MESAU LIM homeobox transcription factor 1-alpha OS=Mesocricetus auratus
GN=LMX1A PE=2 SV=1
Length = 382
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 99/152 (65%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D + KS G + PKRPRTILTTQQRR
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGTSEDGKDHKRPKRPRTILTTQQRR 208
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 209 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>sp|Q8TE12|LMX1A_HUMAN LIM homeobox transcription factor 1-alpha OS=Homo sapiens GN=LMX1A
PE=2 SV=1
Length = 382
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 99/152 (65%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC E + P+E VM+ +V+H+ CF C VC +LQ+G++FV+K+GQL C+ DY
Sbjct: 89 LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Query: 62 EKEVEMLQ-----GYAQGIPFDLITSSKSHDG-----------RRGPKRPRTILTTQQRR 105
EKE E+L G D + KS G + PKRPRTILTTQQRR
Sbjct: 149 EKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGTAEEGKDHKRPKRPRTILTTQQRR 208
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
AFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 209 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>sp|O88609|LMX1B_MOUSE LIM homeobox transcription factor 1-beta OS=Mus musculus GN=Lmx1b
PE=2 SV=2
Length = 372
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 87 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 146
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 147 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 206
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 207 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 241
>sp|Q60564|LMX1B_MESAU LIM homeobox transcription factor 1-beta (Fragment) OS=Mesocricetus
auratus GN=LMX1B PE=2 SV=1
Length = 369
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 77 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 136
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 137 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGGGDDGKDPRRPKRPRTILTTQ 196
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 197 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 231
>sp|O60663|LMX1B_HUMAN LIM homeobox transcription factor 1-beta OS=Homo sapiens GN=LMX1B
PE=1 SV=2
Length = 379
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 19/155 (12%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC GC EK+ P E VM+ L+ V+H+ CF C VC +L++G++FV+K+GQL C+ DY
Sbjct: 87 LFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 146
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGR-------------------RGPKRPRTILTTQ 102
EKE ++L + + + + D + R PKRPRTILTTQ
Sbjct: 147 EKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQ 206
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
QRRAFKASFE+S KPCRKVRE LA +TGLSVR+VQ
Sbjct: 207 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 241
>sp|Q969G2|LHX4_HUMAN LIM/homeobox protein Lhx4 OS=Homo sapiens GN=LHX4 PE=1 SV=2
Length = 390
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>sp|P53776|LHX4_MOUSE LIM/homeobox protein Lhx4 OS=Mus musculus GN=Lhx4 PE=1 SV=4
Length = 390
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 19/136 (13%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V K D V+H+ CF C++C +L G++F +++ G+L C+ DY
Sbjct: 85 FGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 144
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E T+ ++ D G KRPRT +T +Q K +++ SPKP R V
Sbjct: 145 E------------------TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>sp|Q25132|LHX3_HALRO LIM/homeobox protein Lhx3 OS=Halocynthia roretzi GN=LHX3 PE=2 SV=2
Length = 692
Score = 95.9 bits (237), Expect = 7e-20, Method: Composition-based stats.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 18/133 (13%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + P E++ + DNV+H++ F C +C ++ G+QF +++ +L C+ DYE+
Sbjct: 340 KCTACGHGIPPTEVIRRAQDNVYHLEGFCCFLCHEKMGTGDQFYLLEDNRLVCKKDYEQ- 398
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
S+ D G KRPRT +T +Q K+++ SPKP R VRE
Sbjct: 399 ----------------AKSRDADIENGVKRPRTTITAKQLETLKSAYNQSPKPARHVREQ 442
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 443 LSSETGLDMRVVQ 455
>sp|Q9H2C1|LHX5_HUMAN LIM/homeobox protein Lhx5 OS=Homo sapiens GN=LHX5 PE=2 SV=1
Length = 402
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>sp|P20271|HM14_CAEEL Homeobox protein ceh-14 OS=Caenorhabditis elegans GN=ceh-14 PE=2
SV=3
Length = 351
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 16/134 (11%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF--VIKQGQLFCRPDYEK 63
KC C+E + PD +V K ++V+HV+CF C +C L+ GE+F + +L C+ DYE+
Sbjct: 106 KCSSCNEGIVPDHVVRKASNHVYHVECFQCFICKRSLETGEEFYLIADDARLVCKDDYEQ 165
Query: 64 EVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVRE 123
+ +G DG KRPRT ++ + K +++ S KP R VRE
Sbjct: 166 ARDKHCNELEG------------DGSN--KRPRTTISAKSLETLKQAYQTSSKPARHVRE 211
Query: 124 GLARDTGLSVRIVQ 137
LA +TGL +R+VQ
Sbjct: 212 QLASETGLDMRVVQ 225
>sp|P61376|LHX5_RAT LIM/homeobox protein Lhx5 OS=Rattus norvegicus GN=Lhx5 PE=2 SV=1
Length = 402
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>sp|P61375|LHX5_MOUSE LIM/homeobox protein Lhx5 OS=Mus musculus GN=Lhx5 PE=2 SV=1
Length = 402
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV K VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ +G + D TSS ++ + G K
Sbjct: 120 LSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +H++C C C + L E+ ++G+L+C+ D+ +
Sbjct: 5 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDFFRRFG 61
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 62 TKCAGCAQGISPSDLVRKARS 82
>sp|P53412|LHX3_CHICK LIM/homeobox protein Lhx3 OS=Gallus gallus GN=LHX3 PE=2 SV=1
Length = 395
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + + P ++V + D V+H+ CF C+VC +L G++F +++ +L C+ DY
Sbjct: 83 FGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCKADY 142
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K ++ SPKP R V
Sbjct: 143 E-------------------TAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHV 183
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 184 REQLSSETGLDMRVVQ 199
>sp|P50481|LHX3_MOUSE LIM/homeobox protein Lhx3 OS=Mus musculus GN=Lhx3 PE=1 SV=1
Length = 400
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 89 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 148
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 149 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 189
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 190 REQLSSETGLDMRVVQ 205
>sp|Q9UBR4|LHX3_HUMAN LIM/homeobox protein Lhx3 OS=Homo sapiens GN=LHX3 PE=1 SV=2
Length = 397
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 86 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 145
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 146 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 186
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 187 REQLSSETGLDMRVVQ 202
>sp|O97581|LHX3_PIG LIM/homeobox protein Lhx3 (Fragment) OS=Sus scrofa GN=LHX3 PE=2
SV=1
Length = 383
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDY 61
+ KC C + P ++V + D V+H+ CF CVVC +L G++F +++ +L C+ DY
Sbjct: 71 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 130
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
E ++K + KRPRT +T +Q K+++ SPKP R V
Sbjct: 131 E-------------------TAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHV 171
Query: 122 REGLARDTGLSVRIVQ 137
RE L+ +TGL +R+VQ
Sbjct: 172 REQLSSETGLDMRVVQ 187
>sp|Q90421|LHX3_DANRE LIM/homeobox protein Lhx3 OS=Danio rerio GN=lhx3 PE=2 SV=1
Length = 398
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 20/133 (15%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V + D V+H+ CF C+VC +L G+++ +++ +L C+ DYE
Sbjct: 86 KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKADYE-- 143
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
++K + KRPRT +T +Q K ++ SPKP R VRE
Sbjct: 144 -----------------TAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQ 186
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 187 LSTETGLDMRVVQ 199
>sp|P36200|LHX3_XENLA LIM/homeobox protein Lhx3 OS=Xenopus laevis GN=lhx3 PE=1 SV=1
Length = 395
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 20/133 (15%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQF-VIKQGQLFCRPDYEKE 64
KC C + + P ++V + + V+H+ CF C+VC +L G++F +++ +L C+ DYE
Sbjct: 86 KCAACQQGIPPTQVVRRAQEFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCKADYE-- 143
Query: 65 VEMLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREG 124
++K + KRPRT +T +Q K ++ SPKP R VRE
Sbjct: 144 -----------------TAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQ 186
Query: 125 LARDTGLSVRIVQ 137
L+ +TGL +R+VQ
Sbjct: 187 LSSETGLDMRVVQ 199
>sp|P37137|LHX5_XENLA LIM/homeobox protein Lhx5 OS=Xenopus laevis GN=lhx5 PE=1 SV=2
Length = 402
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GCS + P +LV K + VFH+ CF C+VC +L GE+ ++I + + C+ DY
Sbjct: 60 FGTKCAGCSLGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDY 119
Query: 62 EKEVEMLQGYAQGIP---------------------FDLITSS-------KSHDGRRGPK 93
+ + + D TSS ++ + G K
Sbjct: 120 ISASSLKESSLNSVSSCTDRSLSPDIQDPIQDESKETDHSTSSDKETANNENEEQNSGTK 179
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRGPRTTIKAKQLETLKAAFIATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
+ C GC E+ D ++ LD +HV+C C C L E+ ++G+L+C+ D+
Sbjct: 2 MAHCAGC-ERPILDRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKTDF 56
>sp|P53411|LHX1_CHICK LIM/homeobox protein Lhx1 OS=Gallus gallus GN=LHX1 PE=2 SV=1
Length = 406
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 ------EKEVEMLQGYAQGIP----------------------FDLITSSKSHDGRR-GP 92
KE + P D T S +D + G
Sbjct: 119 LNNSNTAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKETGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>sp|Q90476|LHX1_DANRE LIM/homeobox protein Lhx1 OS=Danio rerio GN=lhx1a PE=2 SV=1
Length = 405
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P++LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPNDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKDDY 118
Query: 62 -----EKEVEMLQGYAQGIP----------------------FDLITSSKSHDGRR-GPK 93
K+ +L A P D T + +D + G K
Sbjct: 119 LSNTNGKDSNLLSVTACSDPSLSPDSQDQLQDDVKDAEIANLSDKETGNNENDDQNLGGK 178
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 224
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEVE 66
C GC E+ D ++ LD +H++C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRRFG 60
Query: 67 M-LQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPNDLVRRARS 81
>sp|P48742|LHX1_HUMAN LIM/homeobox protein Lhx1 OS=Homo sapiens GN=LHX1 PE=1 SV=2
Length = 406
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 ------EKEVEMLQGYAQGIPF-----------------------DLITSSKSHDGRRGP 92
KE + P S+++ D G
Sbjct: 119 LSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEAGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>sp|P29674|LHX1_XENLA LIM/homeobox protein Lhx1 OS=Xenopus laevis GN=lhx1 PE=1 SV=1
Length = 403
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 31/166 (18%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 -----------------------EKEVEMLQGYAQGIPFDLITS-----SKSHDGRRGPK 93
+ + LQ A+ ++ +++ D G K
Sbjct: 119 LNNNNAAKENSFISVTGSDPSLSPESQDPLQDDAKDSESANVSDKEAGINENDDQNLGAK 178
Query: 94 R--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
R PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 224
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC E+ D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGC-ERPILDRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRRFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>sp|Q5IS89|LHX1_SAIBB LIM/homeobox protein Lhx1 OS=Saimiri boliviensis boliviensis
GN=LHX1 PE=2 SV=1
Length = 406
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 EKEVEM-----LQGYAQGIPFDLIT------------------------SSKSHDGRRGP 92
+ L G L S+++ D G
Sbjct: 119 LSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>sp|P63007|LHX1_RAT LIM/homeobox protein Lhx1 OS=Rattus norvegicus GN=Lhx1 PE=2 SV=1
Length = 406
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 EKEVEM-----LQGYAQGIPFDLIT------------------------SSKSHDGRRGP 92
+ L G L S+++ D G
Sbjct: 119 LSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>sp|Q5IS44|LHX1_PANTR LIM/homeobox protein Lhx1 OS=Pan troglodytes GN=LHX1 PE=2 SV=1
Length = 406
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 EKEVEM-----LQGYAQGIPFDLIT------------------------SSKSHDGRRGP 92
+ L G L S+++ D G
Sbjct: 119 LSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>sp|P63006|LHX1_MOUSE LIM/homeobox protein Lhx1 OS=Mus musculus GN=Lhx1 PE=1 SV=1
Length = 406
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 EKEVEM-----LQGYAQGIPFDLIT------------------------SSKSHDGRRGP 92
+ L G L S+++ D G
Sbjct: 119 LSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>sp|P63008|LHX1_MESAU LIM/homeobox protein Lhx1 OS=Mesocricetus auratus GN=Lhx1 PE=2 SV=1
Length = 406
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC++ + P +LV + VFH+ CF C++C +L GE+ ++I + + C+ DY
Sbjct: 59 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118
Query: 62 EKEVEM-----LQGYAQGIPFDLIT------------------------SSKSHDGRRGP 92
+ L G L S+++ D G
Sbjct: 119 LSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGA 178
Query: 93 KR--PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
KR PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 179 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV- 65
C GC + D ++ LD +HV+C C C L E+ ++G+L+C+ D+ +
Sbjct: 4 CAGCKRPIL-DRFLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDFFRCFG 60
Query: 66 EMLQGYAQGI-PFDLITSSKS 85
G AQGI P DL+ ++S
Sbjct: 61 TKCAGCAQGISPSDLVRRARS 81
>sp|P52889|LHX5_DANRE LIM/homeobox protein Lhx5 OS=Danio rerio GN=lhx5 PE=2 SV=1
Length = 399
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 37/169 (21%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQ-FVIKQGQLFCRPDY 61
+ KC GC + + P +LV + VFH+ CF C+VC +L GE+ +VI + + C+ DY
Sbjct: 60 FGTKCAGCLQGISPSDLVRRARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKEDY 119
Query: 62 E-----KEVEML-------QGYAQGIPFDLITSSKSHDG--------------------- 88
KEV + + + +P + +K D
Sbjct: 120 LSASAIKEVNLNSVSSCTDRSLSPDLPDQIQDDTKETDNSTSSDKDTNNNENEEQNSCTK 179
Query: 89 RRGPKRPRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
RRG PRT + +Q KA+F +PKP R +RE LA++TGL++R++Q
Sbjct: 180 RRG---PRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQ 225
>sp|P20154|LIN11_CAEEL Protein lin-11 OS=Caenorhabditis elegans GN=lin-11 PE=1 SV=2
Length = 405
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 29/164 (17%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLF-CRPDY 61
Y ++C GC KL ++LV + D VFH++CF C VC L G+Q I +G F C+ D+
Sbjct: 123 YSQRCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIMEGNRFVCQSDF 182
Query: 62 EKEVEMLQGYAQGIPF------------DLITS---------------SKSHDGRRGPKR 94
+ + + P D + + S D +R
Sbjct: 183 QTATKTSTPTSIHRPVSNGSECNSDVEEDNVDACDEVGLDDGEGDCGKDNSDDSNSAKRR 242
Query: 95 -PRTILTTQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
PRT + +Q K +F +PKP R +RE LA +TGL++R++Q
Sbjct: 243 GPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQ 286
>sp|P53409|ISL3_ONCTS Insulin gene enhancer protein ISL-3 OS=Oncorhynchus tschawytscha
GN=isl3 PE=2 SV=1
Length = 363
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C+ +LVM+ DNV+H++CF C VC +L G++F ++ +L CR D+
Sbjct: 84 LFGIKCAKCNLGFSSSDLVMRARDNVYHIECFRCSVCSRQLLPGDEFSLRDEELLCRADH 143
Query: 62 EKEVEMLQG---------------YAQGIPFDLITSSKSHDGRRGPK--RPRTILTTQQR 104
+E + P + ++H ++ K R RT+L +Q
Sbjct: 144 SLLMERTSAGSPISPGHIHSNRSLHLAAEPVTVRAPHRNHVHKQSEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P +RE L TGLS R+++
Sbjct: 204 HTLRTCYNANPRPDALMREQLVEMTGLSPRVIR 236
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 25/55 (45%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C+GC ++ ++ + D +H C C C L ++ G+ +C+ DY
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>sp|P50212|ISL2B_ONCTS Insulin gene enhancer protein ISL-2B (Fragment) OS=Oncorhynchus
tschawytscha GN=isl2b PE=2 SV=1
Length = 340
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 16/152 (10%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C+ +LVM+ DNV+H++CF C VC +L G++F ++ +L CR D+
Sbjct: 66 LFGIKCAKCNIGFCSSDLVMRARDNVYHMECFRCSVCSRQLVPGDEFSLRDEELLCRADH 125
Query: 62 EKEVEMLQGYAQGIPFDLITSS--------------KSHDGRRGPK--RPRTILTTQQRR 105
+E + P ++++ S ++H ++ K R RT+L +Q
Sbjct: 126 GLLLERASAGSPISPGNILSRSFHIADPVSVRQPPHRNHVHKQSEKTTRVRTVLNEKQLH 185
Query: 106 AFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 186 TLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 217
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 25/58 (43%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
+ C+GC ++ ++ D +H C C C L ++ G+ +C+ DY
Sbjct: 6 IAMCVGCGSQIHDQYILRVAPDLEWHAACLKCSECSQYLDETCTCFVRDGKTYCKRDY 63
>sp|P53407|ISL2B_DANRE Insulin gene enhancer protein isl-2b OS=Danio rerio GN=isl2b PE=2
SV=1
Length = 358
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C+ +LVM+ D+V+H++CF C VC +L G++F ++ +L CR D+
Sbjct: 84 LFGIKCAKCTLGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSVRDEELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLI---------------TSSKSHDGRRGPK--RPRTILTTQQR 104
+E G + P ++ T ++H ++ K R RT+L +Q
Sbjct: 144 GLALERGPGGSPLSPGNIHTRGLHMAADPVSVRQTPHRNHVHKQSEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 204 HTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 236
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C+GC ++ ++ + D +H C CV C L ++ G+ +C+ DY
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCVECNQYLDETCTCFVRDGKTYCKRDY 81
>sp|P53410|ISL2_CHICK Insulin gene enhancer protein ISL-2 (Fragment) OS=Gallus gallus
GN=ISL2 PE=2 SV=1
Length = 319
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 13/148 (8%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ D+V+H++CF C CG +L G+QF +++ L CR D+
Sbjct: 47 LFGIKCAQCRAAFSSSDLVMRARDHVYHLECFRCAACGRQLLPGDQFCLRERDLLCRADH 106
Query: 62 EKEVEMLQGYAQGIP-------------FDLITSSKSHDGRRGPKRPRTILTTQQRRAFK 108
+ P +SH R RT+L +Q +
Sbjct: 107 GPPPDGAAARGPRSPAPPPAHLAEPVPGRPPGPRPQSHKAAEKTTRVRTVLNEKQLHTLR 166
Query: 109 ASFEISPKPCRKVREGLARDTGLSVRIV 136
+ +P+P ++E L TGLS R++
Sbjct: 167 TCYAANPRPDALMKEQLVEMTGLSPRVI 194
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 19 LVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK--EVEMLQGYAQGIP 76
L+ + D +HV C C CG L ++ G+ +C+ DY + ++ Q A
Sbjct: 2 LLRVSPDLEWHVACLKCAECGQPLDETCTCFLRDGKAYCKRDYGRLFGIKCAQCRAAFSS 61
Query: 77 FDLITSSKSH 86
DL+ ++ H
Sbjct: 62 SDLVMRARDH 71
>sp|P53406|ISL2A_DANRE Insulin gene enhancer protein isl-2a OS=Danio rerio GN=isl2a PE=2
SV=1
Length = 359
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C+ +LVM+ DNV+H++CF C VC L G++F ++ +L CR D+
Sbjct: 84 LFGIKCAKCNIGFCSSDLVMRARDNVYHMECFRCSVCSRHLLPGDEFSLRDEELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLITS---------------SKSHDGRRGPK--RPRTILTTQQR 104
+E + P ++ +S ++H ++ K R RT+L +Q
Sbjct: 144 GLLMERASAGSPISPGNIHSSRPLHIPEPVPVRQPPHRNHVHKQSEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 204 HTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 236
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
+ C+GC ++ ++ + D +H C C C L ++ G+ +C+ DY
Sbjct: 24 IAMCVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>sp|Q96A47|ISL2_HUMAN Insulin gene enhancer protein ISL-2 OS=Homo sapiens GN=ISL2 PE=1
SV=1
Length = 359
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 17/153 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ D+V+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 84 LFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLITSSKSH-----DGRRGPKRP------------RTILTTQQR 104
+E + P L + H GR+ RP RT+L +Q
Sbjct: 144 GLLLERAAAGSPRSPGPLPGARGLHLPDAGSGRQPALRPHVHKQTEKTTRVRTVLNEKQL 203
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
+ + +P+P ++E L TGLS R+++
Sbjct: 204 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 236
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 25/55 (45%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C+GC ++ ++ + D +H C C C L ++ G+ +C+ DY
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>sp|P53408|ISL2A_ONCTS Insulin gene enhancer protein ISL-2A OS=Oncorhynchus tschawytscha
GN=isl2a PE=2 SV=1
Length = 358
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C+ +LVM+ DNV+H++CF C VC L G++F ++ +L CR D+
Sbjct: 84 LFGIKCANCNIGFCSSDLVMRARDNVYHMECFRCSVCSRHLLPGDEFSLRDEELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFD--LITSSKSHDG-----RRGPKRP------------RTILTTQ 102
+++ + G P +I S H R+ P R RT+L +
Sbjct: 144 GL---LMEQASAGSPLSPGIIHSRSLHIADPVSVRQPPHRNHVHKQSEKTTRVRTVLNEK 200
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIVQ 137
Q + + +P+P ++E L TGLS R+++
Sbjct: 201 QLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 235
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 25/58 (43%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
+ C+GC ++ ++ D +H C C C L ++ G+ +C+ DY
Sbjct: 24 IAMCVGCGSQIHDQYILRVAPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>sp|P61374|ISL1_RAT Insulin gene enhancer protein ISL-1 OS=Rattus norvegicus GN=Isl1
PE=2 SV=1
Length = 349
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 134 --DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
Q + + +P+P ++E L TGLS R++
Sbjct: 192 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 225
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
+ C+GC ++ ++ + D +H C C C L ++ G+ +C+ DY
Sbjct: 14 ISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
>sp|P61372|ISL1_MOUSE Insulin gene enhancer protein ISL-1 OS=Mus musculus GN=Isl1 PE=1
SV=1
Length = 349
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 134 --DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
Q + + +P+P ++E L TGLS R++
Sbjct: 192 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 225
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
+ C+GC ++ ++ + D +H C C C L ++ G+ +C+ DY
Sbjct: 14 ISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
>sp|P61373|ISL1_MESAU Insulin gene enhancer protein ISL-1 OS=Mesocricetus auratus GN=ISL1
PE=2 SV=1
Length = 349
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 134 --DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
Q + + +P+P ++E L TGLS R++
Sbjct: 192 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 225
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
+ C+GC ++ ++ + D +H C C C L ++ G+ +C+ DY
Sbjct: 14 ISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
>sp|P61371|ISL1_HUMAN Insulin gene enhancer protein ISL-1 OS=Homo sapiens GN=ISL1 PE=1
SV=1
Length = 349
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 134 --DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
Q + + +P+P ++E L TGLS R++
Sbjct: 192 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 225
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
+ C+GC ++ ++ + D +H C C C L ++ G+ +C+ DY
Sbjct: 14 ISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
>sp|Q9R1R0|LHX6_MOUSE LIM/homeobox protein Lhx6 OS=Mus musculus GN=Lhx6 PE=1 SV=2
Length = 363
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 130 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 189
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 190 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 249
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 250 QKLADMTGLSRRVIQ 264
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK +++C+ DY
Sbjct: 79 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 123
>sp|Q9UPM6|LHX6_HUMAN LIM/homeobox protein Lhx6 OS=Homo sapiens GN=LHX6 PE=2 SV=2
Length = 363
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 6 KCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEKEV 65
KC C ++ + V + N +H+ CF C C +L GE+F + + ++ CR Y+ +
Sbjct: 130 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI 189
Query: 66 EMLQGYAQ---GIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKVR 122
E L+ A+ G+ + S+ + KR RT T +Q + +A F P +
Sbjct: 190 ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTL 249
Query: 123 EGLARDTGLSVRIVQ 137
+ LA TGLS R++Q
Sbjct: 250 QKLADMTGLSRRVIQ 264
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 17 DELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
D ++K + ++HV+C C VC + L++ IK ++FC+ DY
Sbjct: 79 DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>sp|P53405|ISL1_DANRE Insulin gene enhancer protein isl-1 OS=Danio rerio GN=isl1 PE=2
SV=1
Length = 349
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC C+ ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGI-------PFDLITSSKS----------HDGRRGPKRPRTILTTQQR 104
+ G + P + S H R RT+L +Q
Sbjct: 134 DVVERATMGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEKQL 193
Query: 105 RAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
+ + +P+P ++E L TGLS R++
Sbjct: 194 HTLRTCYNANPRPDALMKEQLVEMTGLSPRVI 225
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
+ C+GC ++ ++ + D +H C C C L ++ G+ +C+ DY
Sbjct: 14 ISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
>sp|P50211|ISL1_CHICK Insulin gene enhancer protein ISL-1 OS=Gallus gallus GN=ISL1 PE=2
SV=1
Length = 349
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
LY KC CS ++ VM+ V+H++CF CV C +L G++F +++ LFCR D+
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARAKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
Query: 62 EKEVEMLQGYAQGIPFD-------LITSSKSHDGRRGPKRP------------RTILTTQ 102
+V G P L +++ R+ RP RT+L +
Sbjct: 134 --DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 103 QRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
Q + + +P+P ++E L TGLS R++
Sbjct: 192 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 225
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
+ C+GC ++ ++ + D +H C C C L ++ G+ +C+ DY
Sbjct: 14 ISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDY 71
>sp|P50480|ISL2_RAT Insulin gene enhancer protein ISL-2 OS=Rattus norvegicus GN=Isl2
PE=1 SV=1
Length = 360
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 24/156 (15%)
Query: 2 LYVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
L+ KC C +LVM+ D+V+H++CF C VC +L G++F +++ +L CR D+
Sbjct: 84 LFGIKCAQCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143
Query: 62 EKEVEMLQGYAQGIPFDLI-------------------TSSKSHDGRRGPK--RPRTILT 100
+L+ A G P S ++H ++ K R RT+L
Sbjct: 144 GL---LLERAAAGSPRSPGPLPGTPPGLHLPDAGSGQQVSLRTHVHKQAEKTTRVRTVLN 200
Query: 101 TQQRRAFKASFEISPKPCRKVREGLARDTGLSVRIV 136
+Q + + +P+P ++E L TGLS R++
Sbjct: 201 EKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 236
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 25/55 (45%)
Query: 7 CLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDY 61
C+GC ++ ++ + D +H C C C L ++ G+ +C+ DY
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>sp|Q8IRC7|AWH_DROME LIM/homeobox protein Awh OS=Drosophila melanogaster GN=Awh PE=1
SV=1
Length = 275
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 3 YVKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYE 62
+ KC C + + V + + VFH+ CF C CG +L GEQF + ++ C+ Y
Sbjct: 65 FGAKCSKCCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHYL 124
Query: 63 KEVE-MLQGYAQGIPFDLITSSKSHDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKV 121
+ VE +G D SK+ KR RT T +Q + +A+F+I P +
Sbjct: 125 ETVEGGTTSSDEGCDGDGYHKSKT-------KRVRTTFTEEQLQVLQANFQIDSNPDGQD 177
Query: 122 REGLARDTGLSVRIVQ 137
E +A TGLS R+ Q
Sbjct: 178 LERIASVTGLSKRVTQ 193
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 4 VKKCLGCSEKLGPDELVMKTLDNVFHVQCFVCVVCGSRLQRGEQFVIKQGQLFCRPDYEK 63
++ C C E + D ++ +H C C +C L R + I++ Q++C+ DY K
Sbjct: 5 LRSCAACGEPI-SDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSK 63
Query: 64 E 64
Sbjct: 64 N 64
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.140 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,129,978
Number of Sequences: 539616
Number of extensions: 1906680
Number of successful extensions: 5657
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 114
Number of HSP's that attempted gapping in prelim test: 5065
Number of HSP's gapped (non-prelim): 609
length of query: 143
length of database: 191,569,459
effective HSP length: 106
effective length of query: 37
effective length of database: 134,370,163
effective search space: 4971696031
effective search space used: 4971696031
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)