BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15438
(358 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q08603|PGTB2_RAT Geranylgeranyl transferase type-2 subunit beta OS=Rattus norvegicus
GN=Rabggtb PE=1 SV=1
Length = 331
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/350 (56%), Positives = 237/350 (67%), Gaps = 39/350 (11%)
Query: 2 RDVDLTDNLPKEFLGTKHAEYIKKYSDNKEDYEYCMSEYLRMSGMYWGITTLSLLDQLDD 61
+DV + + P L KHA+YI Y K+DYEYCMSEYLRMSG+YWG+T + L+ QL
Sbjct: 6 KDVTIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHR 65
Query: 62 MPQDTIFDFITQCIHPCGGVSASISHDPHILYTLSAVQIACLINREHELPVDKIVAYVSK 121
M ++ I FI C H CGGVSASI HDPH+LYTLSAVQI L + H + VDK+VAYV
Sbjct: 66 MNKEEILVFIKSCQHECGGVSASIGHDPHLLYTLSAVQILTLYDSIHVINVDKVVAYVQS 125
Query: 122 LQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKLDAINLSKAVEFILSCCNFDGGFGSRP 181
LQ+ DGSF GD++GE+DTRFSFCAVA L+LLGKLDAIN+ KA+EF+LSC NFDGGFG RP
Sbjct: 126 LQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRP 185
Query: 182 GSESHAGLTYCCVGFLSITGHLHEIDADKLAWWLAERQLPSGGLNGRPEKLPDVCYSWWV 241
GSESHAG YCC GFL+IT LH++++D L WWL ERQLPSGGLNGRPEKLPDVCYSWWV
Sbjct: 186 GSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWV 245
Query: 242 LASLHMLGRGTWINSAALRKFILASQVRNTFYFEMGVFSDKIPVCGVHYVDYCTQVRNRI 301
LASL ++GR WI+ LR FILA Q T F
Sbjct: 246 LASLKIIGRLHWIDREKLRSFILACQDEETGGF--------------------------- 278
Query: 302 EQGCSVRTCISDRPLDIPDPFHTLFGVAALTMLDPPTPDVLPVDPTYCMP 351
+DRP D+ DPFHTLFG+A L++L + PV P +CMP
Sbjct: 279 ----------ADRPGDMVDPFHTLFGIAGLSLLGE--EQIKPVSPVFCMP 316
>sp|P53612|PGTB2_MOUSE Geranylgeranyl transferase type-2 subunit beta OS=Mus musculus
GN=Rabggtb PE=1 SV=2
Length = 339
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/350 (56%), Positives = 237/350 (67%), Gaps = 39/350 (11%)
Query: 2 RDVDLTDNLPKEFLGTKHAEYIKKYSDNKEDYEYCMSEYLRMSGMYWGITTLSLLDQLDD 61
+DV + + P L KHA+YI Y K+DYEYCMSEYLRMSG+YWG+T + L+ QL
Sbjct: 14 KDVTIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHR 73
Query: 62 MPQDTIFDFITQCIHPCGGVSASISHDPHILYTLSAVQIACLINREHELPVDKIVAYVSK 121
M ++ I FI C H CGG+SASI HDPH+LYTLSAVQI L + H + VDK+VAYV
Sbjct: 74 MNREEILVFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSVHVINVDKVVAYVQS 133
Query: 122 LQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKLDAINLSKAVEFILSCCNFDGGFGSRP 181
LQ+ DGSF GD++GE+DTRFSFCAVA L+LLGKLDAIN+ KA+EF+LSC NFDGGFG RP
Sbjct: 134 LQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRP 193
Query: 182 GSESHAGLTYCCVGFLSITGHLHEIDADKLAWWLAERQLPSGGLNGRPEKLPDVCYSWWV 241
GSESHAG YCC GFL+IT LH++++D L WWL ERQLPSGGLNGRPEKLPDVCYSWWV
Sbjct: 194 GSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWV 253
Query: 242 LASLHMLGRGTWINSAALRKFILASQVRNTFYFEMGVFSDKIPVCGVHYVDYCTQVRNRI 301
LASL ++GR WI+ LR FILA Q T F
Sbjct: 254 LASLKIIGRLHWIDREKLRSFILACQDEETGGF--------------------------- 286
Query: 302 EQGCSVRTCISDRPLDIPDPFHTLFGVAALTMLDPPTPDVLPVDPTYCMP 351
+DRP D+ DPFHTLFG+A L++L + PV P +CMP
Sbjct: 287 ----------ADRPGDMVDPFHTLFGIAGLSLLGE--EQIKPVSPVFCMP 324
>sp|P53611|PGTB2_HUMAN Geranylgeranyl transferase type-2 subunit beta OS=Homo sapiens
GN=RABGGTB PE=1 SV=2
Length = 331
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/355 (54%), Positives = 237/355 (66%), Gaps = 39/355 (10%)
Query: 2 RDVDLTDNLPKEFLGTKHAEYIKKYSDNKEDYEYCMSEYLRMSGMYWGITTLSLLDQLDD 61
+DV + + P L KHA+YI Y K+DYEYCMSEYLRMSG+YWG+T + L+ QL
Sbjct: 6 KDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHR 65
Query: 62 MPQDTIFDFITQCIHPCGGVSASISHDPHILYTLSAVQIACLINREHELPVDKIVAYVSK 121
M ++ I FI C H CGG+SASI HDPH+LYTLSAVQI L + + + V+K+V YV
Sbjct: 66 MNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVVEYVKG 125
Query: 122 LQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKLDAINLSKAVEFILSCCNFDGGFGSRP 181
LQ+ DGSF GD++GE+DTRFSFCAVA L+LLGKLDAIN+ KA+EF+LSC NFDGGFG RP
Sbjct: 126 LQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRP 185
Query: 182 GSESHAGLTYCCVGFLSITGHLHEIDADKLAWWLAERQLPSGGLNGRPEKLPDVCYSWWV 241
GSESHAG YCC GFL+IT LH++++D L WWL ERQLPSGGLNGRPEKLPDVCYSWWV
Sbjct: 186 GSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWV 245
Query: 242 LASLHMLGRGTWINSAALRKFILASQVRNTFYFEMGVFSDKIPVCGVHYVDYCTQVRNRI 301
LASL ++GR WI+ LR FILA Q T F
Sbjct: 246 LASLKIIGRLHWIDREKLRNFILACQDEETGGF--------------------------- 278
Query: 302 EQGCSVRTCISDRPLDIPDPFHTLFGVAALTMLDPPTPDVLPVDPTYCMPVRTFH 356
+DRP D+ DPFHTLFG+A L++L + PV+P +CMP
Sbjct: 279 ----------ADRPGDMVDPFHTLFGIAGLSLLG--EEQIKPVNPVFCMPEEVLQ 321
>sp|Q5E9B3|PGTB2_BOVIN Geranylgeranyl transferase type-2 subunit beta OS=Bos taurus
GN=RABGGTB PE=2 SV=1
Length = 331
Score = 398 bits (1022), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/350 (55%), Positives = 236/350 (67%), Gaps = 39/350 (11%)
Query: 2 RDVDLTDNLPKEFLGTKHAEYIKKYSDNKEDYEYCMSEYLRMSGMYWGITTLSLLDQLDD 61
+DV + + P L KHA+YI Y K+DYEYCMSEYLRMSG+YWG+T + L+ QL
Sbjct: 6 KDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHR 65
Query: 62 MPQDTIFDFITQCIHPCGGVSASISHDPHILYTLSAVQIACLINREHELPVDKIVAYVSK 121
M ++ I FI C H CGG+SASI HDPH+LYTLSAVQI L + + + ++K+V YV
Sbjct: 66 MNREEILTFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDINKVVEYVQS 125
Query: 122 LQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKLDAINLSKAVEFILSCCNFDGGFGSRP 181
LQ+ DGSF GD++GE+DTRFSFCAVA L+LLGKLDAIN+ KA+EF+LSC NFDGGFG RP
Sbjct: 126 LQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRP 185
Query: 182 GSESHAGLTYCCVGFLSITGHLHEIDADKLAWWLAERQLPSGGLNGRPEKLPDVCYSWWV 241
GSESHAG YCC GFL+IT LH++++D L WWL ERQLPSGGLNGRPEKLPDVCYSWWV
Sbjct: 186 GSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWV 245
Query: 242 LASLHMLGRGTWINSAALRKFILASQVRNTFYFEMGVFSDKIPVCGVHYVDYCTQVRNRI 301
LASL ++GR WI+ LR FILA Q T F
Sbjct: 246 LASLKIIGRLHWIDREKLRSFILACQDEETGGF--------------------------- 278
Query: 302 EQGCSVRTCISDRPLDIPDPFHTLFGVAALTMLDPPTPDVLPVDPTYCMP 351
+DRP D+ DPFHTLFG+A L++L + PV P +CMP
Sbjct: 279 ----------ADRPGDMVDPFHTLFGIAGLSLLG--EEQIKPVSPVFCMP 316
>sp|P41992|GGTB2_CAEEL Probable geranylgeranyl transferase type-2 subunit beta
OS=Caenorhabditis elegans GN=ggtb-1 PE=3 SV=2
Length = 335
Score = 316 bits (809), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/352 (46%), Positives = 209/352 (59%), Gaps = 39/352 (11%)
Query: 2 RDVDLTDNLPKEFLGTKHAEYIKKYSDNKEDYEYCMSEYLRMSGMYWGITTLSLLDQLDD 61
+DVDL N P E L HA +I +Y NK Y Y M+E+LR+SG+YW + + L QL+
Sbjct: 12 KDVDLPQNSPNELLKDLHANFINQYEKNKNSYHYIMAEHLRVSGIYWCVNAMDLSKQLER 71
Query: 62 MPQDTIFDFITQCIHPCGGVSASISHDPHILYTLSAVQIACLINREHELPVDKIVAYVSK 121
M + I +++ C + GG + HD H+L+TL AVQ + N + D I YV
Sbjct: 72 MSTEEIVNYVLGCRNTDGGYGPAPGHDSHLLHTLCAVQTLIIFNSIEKADADTISEYVKG 131
Query: 122 LQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKLDAINLSKAVEFILSCCNFDGGFGSRP 181
LQQ DGSF GD+ GEVDTRF+ C++A LLG+L +N+ AV F++ C N DGGFG+RP
Sbjct: 132 LQQEDGSFCGDLSGEVDTRFTLCSLATCHLLGRLSTLNIDSAVRFLMRCYNTDGGFGTRP 191
Query: 182 GSESHAGLTYCCVGFLSITGHLHEIDADKLAWWLAERQLPSGGLNGRPEKLPDVCYSWWV 241
GSESH+G YCCVG L+I G L EID D+ A WLA RQ SGGLNGRPEKLPDVCYSWWV
Sbjct: 192 GSESHSGQIYCCVGALAIAGRLDEIDRDRTAEWLAFRQCDSGGLNGRPEKLPDVCYSWWV 251
Query: 242 LASLHMLGRGTWINSAALRKFILASQVRNTFYFEMGVFSDKIPVCGVHYVDYCTQVRNRI 301
LASL +LGR +I+S A++KFI A Q T F
Sbjct: 252 LASLAILGRLNFIDSDAMKKFIYACQDDETGGF--------------------------- 284
Query: 302 EQGCSVRTCISDRPLDIPDPFHTLFGVAALTMLDPPTPDVLPVDPTYCMPVR 353
+DRP D DPFHT+FG+AAL++ T + VDP +CM R
Sbjct: 285 ----------ADRPGDCADPFHTVFGIAALSLFGDDTLE--SVDPIFCMTKR 324
>sp|B0G172|PGTB2_DICDI Probable geranylgeranyl transferase type-2 subunit beta
OS=Dictyostelium discoideum GN=rabggtb PE=3 SV=1
Length = 339
Score = 305 bits (781), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/365 (43%), Positives = 214/365 (58%), Gaps = 50/365 (13%)
Query: 6 LTDNLPKE-------------FLGTKHAEYIKKYSDNKEDYEYCMSEYLRMSGMYWGITT 52
+TDN+ KE L KH EYI K K+ +EY ++E++RM+GMYWG+++
Sbjct: 1 MTDNINKESTTTTTTIDHTTNLLIDKHVEYIVKLGSKKDSFEYWVTEHIRMNGMYWGLSS 60
Query: 53 LSLLDQLDDMPQDTIFDFITQCIHPCGGVSASISHDPHILYTLSAVQIACLINREHELPV 112
L LL LD + ++ + ++ C GG + SHD H+L TLSAVQI + ++ +
Sbjct: 61 LYLLKSLDKLDKNEVIQWLLSCQKSNGGFGGNTSHDDHLLSTLSAVQILIQYDALDKIDI 120
Query: 113 DKIVAYVSKLQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKLDAINLSKAVEFILSCCN 172
+ +V YV KLQ+ DGSF GD +GEVDTRFS+ A+ CLSLL LD IN KAVE+ILSC N
Sbjct: 121 NSVVDYVVKLQREDGSFVGDQWGEVDTRFSYAAIMCLSLLKSLDKINCEKAVEYILSCQN 180
Query: 173 FDGGFGSRPGSESHAGLTYCCVGFLSITGHLHEIDADKLAWWLAERQLPSGGLNGRPEKL 232
FDGGFGS PG+ESHAG + CVG LSI +++ID DKL WWL+ERQLP+GGLNGRPEK
Sbjct: 181 FDGGFGSIPGAESHAGQIFTCVGALSILNEINKIDIDKLGWWLSERQLPNGGLNGRPEKS 240
Query: 233 PDVCYSWWVLASLHMLGRGTWINSAALRKFILASQVRNTFYFEMGVFSDKIPVCGVHYVD 292
DVCYSWWVL++L + R WI++ L+ +IL Q T
Sbjct: 241 SDVCYSWWVLSALSAIDRLHWIDNDKLKSYILKCQDNET--------------------- 279
Query: 293 YCTQVRNRIEQGCSVRTCISDRPLDIPDPFHTLFGVAALTMLDPPTPDVLPVDPTYCMPV 352
I+D+P DIPD FHT FG+ L+++ + +DP Y +
Sbjct: 280 ----------------GGIADKPGDIPDVFHTFFGICGLSLMGYFKDQIESIDPVYALGT 323
Query: 353 RTFHS 357
+T
Sbjct: 324 KTLQK 328
>sp|P20133|PGTB2_YEAST Geranylgeranyl transferase type-2 subunit beta OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=BET2 PE=1
SV=3
Length = 325
Score = 256 bits (654), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/345 (40%), Positives = 194/345 (56%), Gaps = 46/345 (13%)
Query: 14 FLGTKHAEYIKKYSDNKEDYEYCMSEYLRMSGMYWGITTLSLLDQLDDMPQDTIFDFITQ 73
L KH YI+ K ++EY ++E+LR++G+YWG+T L +LD + ++ + F+
Sbjct: 7 LLKEKHIRYIESLDTKKHNFEYWLTEHLRLNGIYWGLTALCVLDSPETFVKEEVISFVLS 66
Query: 74 CIHPCGGVSASI-SHDPHILYTLSAVQIACLINREHELPVDK---IVAYVSKLQQPDGSF 129
C G A HD H+L TLSAVQI + L D+ +++++ Q DGSF
Sbjct: 67 CWDDKYGAFAPFPRHDAHLLTTLSAVQILATYDALDVLGKDRKVRLISFIRGNQLEDGSF 126
Query: 130 FGDMYGEVDTRFSFCAVACLSLLGKLDAINLSKAVEFILSCCNFDGGFGSRPGSESHAGL 189
GD +GEVDTRF + A++ LS+LG+L + + AV+F+L C NFDGGFG P +ESHA
Sbjct: 127 QGDRFGEVDTRFVYTALSALSILGELTSEVVDPAVDFVLKCYNFDGGFGLCPNAESHAAQ 186
Query: 190 TYCCVGFLSITGHLHEIDADKL---AWWLAERQLPSGGLNGRPEKLPDVCYSWWVLASLH 246
+ C+G L+I L + D+L WWL ERQLP GGLNGRP KLPDVCYSWWVL+SL
Sbjct: 187 AFTCLGALAIANKLDMLSDDQLEEIGWWLCERQLPEGGLNGRPSKLPDVCYSWWVLSSLA 246
Query: 247 MLGRGTWINSAALRKFILASQVRNTFYFEMGVFSDKIPVCGVHYVDYCTQVRNRIEQGCS 306
++GR WIN L +FIL Q
Sbjct: 247 IIGRLDWINYEKLTEFILKCQDEK------------------------------------ 270
Query: 307 VRTCISDRPLDIPDPFHTLFGVAALTMLDPPTPDVLPVDPTYCMP 351
+ ISDRP + D FHT+FGVA L+++ +++P+DP YCMP
Sbjct: 271 -KGGISDRPENEVDVFHTVFGVAGLSLMG--YDNLVPIDPIYCMP 312
>sp|O93830|PGTB2_CANAX Geranylgeranyl transferase type-2 subunit beta OS=Candida albicans
GN=BET2 PE=3 SV=1
Length = 341
Score = 253 bits (646), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/368 (40%), Positives = 197/368 (53%), Gaps = 60/368 (16%)
Query: 9 NLPKE-----FLGTKHAEYIKKYSDNKEDYEYCMSEYLRMSGMYWGITTLSLLDQLDDMP 63
NLP + F +KH +YI + ++ +EY +SE+LRM+G+YWG+T L +++L +
Sbjct: 3 NLPPDEKVILFDKSKHVQYIVEQESHRS-FEYWLSEHLRMNGLYWGVTALITMNELSALA 61
Query: 64 QDTIFDFITQCIHPCGGVSASI-SHDPHILYTLSAVQIACLINREHELPVD--------- 113
Q + D+I C G S HD HIL TLSA+Q+ + ++E + D
Sbjct: 62 QQDVIDYIMLCWDDKTGAFGSFPKHDGHILSTLSALQVLKIYDQELTVLNDNNESSNGNK 121
Query: 114 --KIVAYVSKLQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKLDAINLSKAVEFILSCC 171
+++ +++ LQ PDGSF GD YGEVDTRF + AV+ LSLL L A FI+ C
Sbjct: 122 RERLIKFITGLQLPDGSFQGDKYGEVDTRFVYTAVSSLSLLNALTDSIADTASAFIMQCF 181
Query: 172 NFDGGFGSRPGSESHAGLTYCCVGFLSITGHLHEIDAD----KLAWWLAERQ-LPSGGLN 226
NFDGGFG PGSESHA + CVG L+I L +D + KL WL ERQ LPSGG N
Sbjct: 182 NFDGGFGLIPGSESHAAQVFTCVGALAIMNKLDLLDVENKKVKLIDWLTERQVLPSGGFN 241
Query: 227 GRPEKLPDVCYSWWVLASLHMLGRGTWINSAALRKFILASQVRNTFYFEMGVFSDKIPVC 286
GRPEKLPDVCYSWWVL+SL +L R W++ L FIL Q
Sbjct: 242 GRPEKLPDVCYSWWVLSSLSILKRKNWVDLKILENFILTCQ------------------- 282
Query: 287 GVHYVDYCTQVRNRIEQGCSVRTCISDRPLDIPDPFHTLFGVAALTMLDPPTPDVLPVDP 346
+E G SDRP + D +HT F +A L+++D +DP
Sbjct: 283 -------------DLENG-----GFSDRPGNQTDVYHTCFAIAGLSLIDYKKYGFKEIDP 324
Query: 347 TYCMPVRT 354
YCMPV
Sbjct: 325 VYCMPVEV 332
>sp|P46960|PGTB2_SCHPO Geranylgeranyl transferase type-2 subunit beta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ptb1 PE=3 SV=1
Length = 311
Score = 243 bits (620), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 185/341 (54%), Gaps = 39/341 (11%)
Query: 14 FLGTKHAEYIKKYSDNKEDYEYCMSEYLRMSGMYWGITTLSLLDQLDDMPQDTIFDFITQ 73
L KH Y+ + ++ ++ + E+L +S +YW + LL + D + ++ I F+
Sbjct: 4 LLRDKHISYLHDIGNRTDELDFWLKEHLHVSAIYWSCMSFWLLKKKDQIDKERIVSFLLS 63
Query: 74 CIHPCGGVSASISHDPHILYTLSAVQIACLINREHELPVDKIVAYVSKLQQPDGSFFGDM 133
C+ GG + HD HI T+ AVQ+ +++ H + DK+ +Y+ LQ DGS GD
Sbjct: 64 CLTESGGFACYPGHDDHITNTVYAVQVLAMLDSLHVVDKDKVASYIIGLQNEDGSMKGDR 123
Query: 134 YGEVDTRFSFCAVACLSLLGKLDAINLSKAVEFILSCCNFDGGFGSRPGSESHAGLTYCC 193
+GE+D RF + + CL++LGKLD +N + AV++++ C NFDGGFG PG+ESH + + C
Sbjct: 124 WGEIDARFLYSGINCLAILGKLDYLNKNTAVDWLMKCYNFDGGFGLCPGAESHGAMVFTC 183
Query: 194 VGFLSITGHLHEIDADKLAWWLAERQLPSGGLNGRPEKLPDVCYSWWVLASLHMLGRGTW 253
V L I L ID + L WW++ERQ+ GGLNGRPEKLPD CY WW L+ L ++G+ W
Sbjct: 184 VAALKILNKLDLIDEELLGWWISERQVKGGGLNGRPEKLPDSCYGWWDLSPLAIIGKLDW 243
Query: 254 INSAALRKFILASQVRNTFYFEMGVFSDKIPVCGVHYVDYCTQVRNRIEQGCSVRTCISD 313
I+ L F+L +Q ++ F +D
Sbjct: 244 IDRNQLIDFLLGTQDADSGGF-------------------------------------AD 266
Query: 314 RPLDIPDPFHTLFGVAALTMLDPPTPDVLPVDPTYCMPVRT 354
R D D +HT F +A L++L P++ PVDP +C+P+
Sbjct: 267 RKEDATDVYHTCFSLAGLSLL--QFPNIEPVDPRFCLPLEV 305
>sp|Q04903|FNTB_PEA Protein farnesyltransferase subunit beta OS=Pisum sativum GN=FTB
PE=2 SV=1
Length = 419
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 111/208 (53%), Gaps = 4/208 (1%)
Query: 47 YWGITTLSLL-DQLDDMPQDTIFDFITQCIHPCGGVSASISHDPHILYTLSAVQIACLIN 105
YW I +++LL + +DD +D DF+ +C P GG + PH+ T +AV +
Sbjct: 50 YWIIHSIALLGESIDDDLEDNTVDFLNRCQDPNGGYAGGPGQMPHLATTYAAVNTLITLG 109
Query: 106 REHELPV---DKIVAYVSKLQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKLDAINLSK 162
E L +K+ ++ +++QP+G F GE+D R + A++ S+L LD +
Sbjct: 110 GEKSLASINRNKLYGFMRRMKQPNGGFRMHDEGEIDVRACYTAISVASVLNILDDELIKN 169
Query: 163 AVEFILSCCNFDGGFGSRPGSESHAGLTYCCVGFLSITGHLHEIDADKLAWWLAERQLPS 222
+FILSC ++GG PGSE+H G T+C + + + G ++ +D +L W+ RQ
Sbjct: 170 VGDFILSCQTYEGGLAGEPGSEAHGGYTFCGLAAMILIGEVNRLDLPRLLDWVVFRQGKE 229
Query: 223 GGLNGRPEKLPDVCYSWWVLASLHMLGR 250
G GR KL D CYS+W ++ +L R
Sbjct: 230 CGFQGRTNKLVDGCYSFWQGGAVALLQR 257
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 88/224 (39%), Gaps = 27/224 (12%)
Query: 47 YWGITTLSLLDQLDDMPQDTIFDFITQCIHPCGGVSASISHDPHILYTLSAVQIACLINR 106
Y I+ S+L+ LDD + DFI C GG++ + H YT + LI
Sbjct: 150 YTAISVASVLNILDDELIKNVGDFILSCQTYEGGLAGEPGSEAHGGYTFCGLAAMILIGE 209
Query: 107 EHELPVDKIVAYVSKLQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKLDAI---NLSKA 163
+ L + +++ +V Q + F G VD +SF ++LL +L +I +++A
Sbjct: 210 VNRLDLPRLLDWVVFRQGKECGFQGRTNKLVDGCYSFWQGGAVALLQRLHSIIDEQMAEA 269
Query: 164 VEFIL--------SCCNFDGGFGSRPGSESHAGLTYCCVGFLSITGH------------L 203
+F+ C DG H G+ C + G+
Sbjct: 270 SQFVTVSDAPEEKEC--LDGTSSHATSHIRHEGMNESCSSDVKNIGYNFISEWRQSEPLF 327
Query: 204 HEIDADKLAWWLAERQLPSGGLNGRPEKLPDVCYSWWVLASLHM 247
H I + ++ Q GGL +P K D +S + L+ L +
Sbjct: 328 HSIALQQYILLCSQEQ--DGGLRDKPGKRRDHYHSCYCLSGLSL 369
>sp|Q55D51|FNTB_DICDI Protein farnesyltransferase subunit beta OS=Dictyostelium
discoideum GN=fntB PE=3 SV=1
Length = 500
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 90/158 (56%), Gaps = 3/158 (1%)
Query: 86 SHDPHILYTLSAVQIACLINREHELPV---DKIVAYVSKLQQPDGSFFGDMYGEVDTRFS 142
SH H++ T +AV +I E + + ++ +++ +G+F + GE D+R +
Sbjct: 143 SHTSHVVSTFAAVSALYVIGTEESYKTIDREAMYKFLMRMKTKEGAFTSEDGGEYDSRTT 202
Query: 143 FCAVACLSLLGKLDAINLSKAVEFILSCCNFDGGFGSRPGSESHAGLTYCCVGFLSITGH 202
+CA+A S+L L A V+F+LSC ++GGFG+ P +E+H G T+C V LSI
Sbjct: 203 YCAIAVASMLNILTAELERGVVDFLLSCQTYEGGFGAYPFNEAHGGYTFCSVAALSILNS 262
Query: 203 LHEIDADKLAWWLAERQLPSGGLNGRPEKLPDVCYSWW 240
LH+ID + L W+ RQ GG GR KL D CYS+W
Sbjct: 263 LHKIDMNSLHRWITYRQSNDGGFEGRTNKLVDTCYSYW 300
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%)
Query: 47 YWGITTLSLLDQLDDMPQDTIFDFITQCIHPCGGVSASISHDPHILYTLSAVQIACLINR 106
Y I S+L+ L + + DF+ C GG A ++ H YT +V ++N
Sbjct: 203 YCAIAVASMLNILTAELERGVVDFLLSCQTYEGGFGAYPFNEAHGGYTFCSVAALSILNS 262
Query: 107 EHELPVDKIVAYVSKLQQPDGSFFGDMYGEVDTRFSF 143
H++ ++ + +++ Q DG F G VDT +S+
Sbjct: 263 LHKIDMNSLHRWITYRQSNDGGFEGRTNKLVDTCYSY 299
>sp|O13782|FNTB_SCHPO Protein farnesyltransferase subunit beta OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cpp1 PE=1 SV=1
Length = 382
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 155/334 (46%), Gaps = 32/334 (9%)
Query: 6 LTDNLPKEFLGTKHAEYIKKYSDNKEDYEYCMSEYLRMSGMYWGITTLSLLDQLDDMPQD 65
L + + F KH +Y+ K D + + + R +YW +++L++L +LD +
Sbjct: 21 LLNGESQSFNLQKHLKYLTKMLDPLPS-PFTVLDASRAWMVYWELSSLAILGKLDSSVCE 79
Query: 66 TIFDFITQCIHPCGGVSASISHDPHILYTLSAVQIACLINREHELPV---DKIVAYVSKL 122
+ Q P GG D H+L T +++ CL + + D++ ++ L
Sbjct: 80 RAISSVRQLKGPSGGFCGGNGQDEHLLSTYASILSICLCDSTDAYSLIERDRLYDWLFSL 139
Query: 123 QQPDGSFFGDMYGEVDTRFSFCAVACLSLLG-KLDAINLSKAVEFILSCCNFDGGFGSRP 181
+ PDGSF + GE D R + AV SL+G +D ++++ C ++GG P
Sbjct: 140 KNPDGSFRVNNEGESDARSVYAAVCVSSLVGISMDDPLFEGTLQWLCKCQTYEGGLSGVP 199
Query: 182 GSESHAGLTYCCVGFLSITGHLHEIDADKLAWWLAERQLPS-GGLNGRPEKLPDVCYSWW 240
+E+H G T+C + +++ G L ++ KL+ WL +RQ P+ G +GR KL D CYSWW
Sbjct: 200 YAEAHGGYTFCALAAIALLGGLDNLNEIKLSTWLVQRQDPALYGFSGRSNKLVDGCYSWW 259
Query: 241 VLASLHMLGRGTWINSAALRKFILASQVRNTFYFEMGVFSDKIPVCGVHYVDYCTQVRNR 300
V AS ++ G SA+ + + N FY P + Y+ C Q
Sbjct: 260 VGASHVIVASG--YGSASHKS------LPNLFY---------NPEKLLGYILQCCQ---- 298
Query: 301 IEQGCSVRTCISDRPLDIPDPFHTLFGVAALTML 334
S + D+P PD +HT + + L+ +
Sbjct: 299 -----STSGGLRDKPPKRPDQYHTCYCLLGLSSI 327
>sp|Q02293|FNTB_RAT Protein farnesyltransferase subunit beta OS=Rattus norvegicus
GN=Fntb PE=1 SV=1
Length = 437
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 116/241 (48%), Gaps = 10/241 (4%)
Query: 18 KHAEYIKKYSDNKEDYEYCMSEYLRMSGMYWGITTLSLLDQLDDMPQDTIFD---FITQC 74
KH Y+K+ D C+ + R YW + +L LLD + +PQ D F+ C
Sbjct: 77 KHFHYLKRGLRQLTDAYECL-DASRPWLCYWILHSLELLD--EPIPQIVATDVCQFLELC 133
Query: 75 IHPCGGVSASISHDPHILYTLSAVQIACLINREHELPV---DKIVAYVSKLQQPDGSFFG 131
P GG PH+ T +AV C+I E V +K++ Y+ L+QPDGSF
Sbjct: 134 QSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYNVINREKLLQYLYSLKQPDGSFLM 193
Query: 132 DMYGEVDTRFSFCAVACLSLLGKLDAINLSKAVEFILSCCNFDGGFGSRPGSESHAGLTY 191
+ GEVD R ++CA + SL + E+I C N++GG G PG E+H G T+
Sbjct: 194 HVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTF 253
Query: 192 CCVGFLSITGHLHEIDADKLAWWLAERQLP-SGGLNGRPEKLPDVCYSWWVLASLHMLGR 250
C + L I ++ L W+ RQ+ GG GR KL D CYS+W L +L R
Sbjct: 254 CGLAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHR 313
Query: 251 G 251
Sbjct: 314 A 314
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 8/167 (4%)
Query: 111 PVDKIVA-----YVSKLQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKLDA---INLSK 162
P+ +IVA ++ Q PDG F G ++ AV L ++G +A IN K
Sbjct: 117 PIPQIVATDVCQFLELCQSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYNVINREK 176
Query: 163 AVEFILSCCNFDGGFGSRPGSESHAGLTYCCVGFLSITGHLHEIDADKLAWWLAERQLPS 222
++++ S DG F G E YC S+T + + A W+A Q
Sbjct: 177 LLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWE 236
Query: 223 GGLNGRPEKLPDVCYSWWVLASLHMLGRGTWINSAALRKFILASQVR 269
GG+ G P Y++ LA+L +L + +N +L +++ + Q+R
Sbjct: 237 GGIGGVPGMEAHGGYTFCGLAALVILKKERSLNLKSLLQWVTSRQMR 283
>sp|Q8K2I1|FNTB_MOUSE Protein farnesyltransferase subunit beta OS=Mus musculus GN=Fntb
PE=1 SV=1
Length = 437
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 116/241 (48%), Gaps = 10/241 (4%)
Query: 18 KHAEYIKKYSDNKEDYEYCMSEYLRMSGMYWGITTLSLLDQLDDMPQDTIFD---FITQC 74
KH Y+K+ D C+ + R YW + +L LLD + +PQ D F+ C
Sbjct: 77 KHFHYLKRGLRQLTDAYECL-DASRPWLCYWILHSLELLD--EPIPQIVATDVCQFLELC 133
Query: 75 IHPCGGVSASISHDPHILYTLSAVQIACLINREHELPV---DKIVAYVSKLQQPDGSFFG 131
P GG PH+ T +AV C+I E V +K++ Y+ L+QPDGSF
Sbjct: 134 QSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYNVINREKLLQYLYSLKQPDGSFLM 193
Query: 132 DMYGEVDTRFSFCAVACLSLLGKLDAINLSKAVEFILSCCNFDGGFGSRPGSESHAGLTY 191
+ GEVD R ++CA + SL + E+I C N++GG G PG E+H G T+
Sbjct: 194 HVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTF 253
Query: 192 CCVGFLSITGHLHEIDADKLAWWLAERQLP-SGGLNGRPEKLPDVCYSWWVLASLHMLGR 250
C + L I ++ L W+ RQ+ GG GR KL D CYS+W L +L R
Sbjct: 254 CGLAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHR 313
Query: 251 G 251
Sbjct: 314 A 314
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 8/167 (4%)
Query: 111 PVDKIVA-----YVSKLQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKLDA---INLSK 162
P+ +IVA ++ Q PDG F G ++ AV L ++G +A IN K
Sbjct: 117 PIPQIVATDVCQFLELCQSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYNVINREK 176
Query: 163 AVEFILSCCNFDGGFGSRPGSESHAGLTYCCVGFLSITGHLHEIDADKLAWWLAERQLPS 222
++++ S DG F G E YC S+T + + A W+A Q
Sbjct: 177 LLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWE 236
Query: 223 GGLNGRPEKLPDVCYSWWVLASLHMLGRGTWINSAALRKFILASQVR 269
GG+ G P Y++ LA+L +L + +N +L +++ + Q+R
Sbjct: 237 GGIGGVPGMEAHGGYTFCGLAALVILKKERSLNLKSLLQWVTSRQMR 283
>sp|P49356|FNTB_HUMAN Protein farnesyltransferase subunit beta OS=Homo sapiens GN=FNTB
PE=1 SV=1
Length = 437
Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 116/241 (48%), Gaps = 10/241 (4%)
Query: 18 KHAEYIKKYSDNKEDYEYCMSEYLRMSGMYWGITTLSLLDQLDDMPQDTIFD---FITQC 74
KH Y+K+ D C+ + R YW + +L LLD + +PQ D F+ C
Sbjct: 77 KHFHYLKRGLRQLTDAYECL-DASRPWLCYWILHSLELLD--EPIPQIVATDVCQFLELC 133
Query: 75 IHPCGGVSASISHDPHILYTLSAVQIACLINREHELPV---DKIVAYVSKLQQPDGSFFG 131
P GG PH+ T +AV C+I E + +K++ Y+ L+QPDGSF
Sbjct: 134 QSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSFLM 193
Query: 132 DMYGEVDTRFSFCAVACLSLLGKLDAINLSKAVEFILSCCNFDGGFGSRPGSESHAGLTY 191
+ GEVD R ++CA + SL + E+I C N++GG G PG E+H G T+
Sbjct: 194 HVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTF 253
Query: 192 CCVGFLSITGHLHEIDADKLAWWLAERQLP-SGGLNGRPEKLPDVCYSWWVLASLHMLGR 250
C + L I ++ L W+ RQ+ GG GR KL D CYS+W L +L R
Sbjct: 254 CGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHR 313
Query: 251 G 251
Sbjct: 314 A 314
>sp|P49355|FNTB_BOVIN Protein farnesyltransferase subunit beta OS=Bos taurus GN=FNTB PE=2
SV=1
Length = 437
Score = 121 bits (304), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 114/239 (47%), Gaps = 6/239 (2%)
Query: 18 KHAEYIKKYSDNKEDYEYCMSEYLRMSGMYWGITTLSLLDQ-LDDMPQDTIFDFITQCIH 76
KH Y+K+ D C+ + R YW + +L LLD+ + M + F+ C
Sbjct: 77 KHFHYLKRGLRQLTDAYECL-DASRPWLCYWILHSLELLDEPIPQMVATDVCQFLELCQS 135
Query: 77 PCGGVSASISHDPHILYTLSAVQIACLINREHELPV---DKIVAYVSKLQQPDGSFFGDM 133
P GG PH+ T +AV C+I E V +K++ Y+ L+QPDGSF
Sbjct: 136 PEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDVINREKLLQYLYSLKQPDGSFLMHD 195
Query: 134 YGEVDTRFSFCAVACLSLLGKLDAINLSKAVEFILSCCNFDGGFGSRPGSESHAGLTYCC 193
GEVD R ++CA + SL + E+I C N++GG G PG E+H G T+C
Sbjct: 196 GGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCG 255
Query: 194 VGFLSITGHLHEIDADKLAWWLAERQLP-SGGLNGRPEKLPDVCYSWWVLASLHMLGRG 251
+ L I ++ L W+ RQ+ GG GR KL D CYS+W L +L R
Sbjct: 256 LAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRA 314
>sp|Q38920|FNTB_ARATH Protein farnesyltransferase subunit beta OS=Arabidopsis thaliana
GN=FTB PE=1 SV=3
Length = 482
Score = 104 bits (260), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 47 YWGITTLSLLDQ-LDDMPQDTIFDFITQCIHPCGGVSASISHDPHILYTLSAVQIACLIN 105
YW + +++LL + +DD + DF+ +C GG PH+ T +AV +
Sbjct: 113 YWILHSIALLGETVDDELESNAIDFLGRCQGSEGGYGGGPGQLPHLATTYAAVNALVTLG 172
Query: 106 REHELPV---DKIVAYVSKLQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKLDAINLSK 162
+ L +K+ ++ +++ G F GE+D R + A++ S+L +D
Sbjct: 173 GDKALSSINREKMSCFLRRMKDTSGGFRMHDMGEMDVRACYTAISVASILNIMDDELTQG 232
Query: 163 AVEFILSCCNFDGGFGSRPGSESHAGLTYCCVGFLSITGHLHEIDADKLAWWLAERQLPS 222
++ILSC ++GG G PGSE+H G TYC + + + + ++ D L W RQ
Sbjct: 233 LGDYILSCQTYEGGIGGEPGSEAHGGYTYCGLAAMILINEVDRLNLDSLMNWAVHRQGVE 292
Query: 223 GGLNGRPEKLPDVCYSWWVLASLHMLGR 250
G GR KL D CY++W A +L R
Sbjct: 293 MGFQGRTNKLVDGCYTFWQAAPCVLLQR 320
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%)
Query: 47 YWGITTLSLLDQLDDMPQDTIFDFITQCIHPCGGVSASISHDPHILYTLSAVQIACLINR 106
Y I+ S+L+ +DD + D+I C GG+ + H YT + LIN
Sbjct: 213 YTAISVASILNIMDDELTQGLGDYILSCQTYEGGIGGEPGSEAHGGYTYCGLAAMILINE 272
Query: 107 EHELPVDKIVAYVSKLQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKLDAIN 159
L +D ++ + Q + F G VD ++F A LL +L + N
Sbjct: 273 VDRLNLDSLMNWAVHRQGVEMGFQGRTNKLVDGCYTFWQAAPCVLLQRLYSTN 325
>sp|P53610|PGTB1_RAT Geranylgeranyl transferase type-1 subunit beta OS=Rattus norvegicus
GN=Pggt1b PE=1 SV=1
Length = 377
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 135/291 (46%), Gaps = 39/291 (13%)
Query: 13 EFLGTKHAEYIKKYSDNKEDYEYCMSEYLRMSGMYWGITTLSLLDQLDDMPQDTIFDFI- 71
+FL +H + ++ + Y E R++ ++ ++ L +LD LD + +D I ++I
Sbjct: 19 DFLRDRHVRFFQRCLQVLPE-RYSSLETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIY 77
Query: 72 ---------TQCIHPCG-------GVSASISHDP---------HILYTLSAVQIACLINR 106
+ CG G+ + S +P HI T + ++CLI
Sbjct: 78 SLQVLPTEDRSNLDRCGFRGSSYLGIPFNPSKNPGTAHPYDSGHIAMTYTG--LSCLIIL 135
Query: 107 EHELP-VDK--IVAYVSKLQQPDGSFFGDMYG-EVDTRFSFCAVACLSLLGKLDAINLSK 162
+L VDK +A + LQ DGSF G E D RF +CA +L +++ K
Sbjct: 136 GDDLSRVDKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKK 195
Query: 163 AVEFILSCCNFDGGFGSRPGSESHAGLTYCCVGFLSITGHLHEI----DADKLAWWLAER 218
A+ +I ++D G G ESH G T+C + L + G L E+ + +++ W R
Sbjct: 196 AISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEKELNRIKRWCIMR 255
Query: 219 QLPSGGLNGRPEKLPDVCYSWWVLASLHMLGRGTWINSAALRKFILASQVR 269
Q G +GRP K D CYS+WV A+L +L + N R +IL++Q R
Sbjct: 256 Q--QNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQDR 304
>sp|Q8BUY9|PGTB1_MOUSE Geranylgeranyl transferase type-1 subunit beta OS=Mus musculus
GN=Pggt1b PE=2 SV=1
Length = 377
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 135/291 (46%), Gaps = 39/291 (13%)
Query: 13 EFLGTKHAEYIKKYSDNKEDYEYCMSEYLRMSGMYWGITTLSLLDQLDDMPQDTIFDFI- 71
+FL +H + ++ + Y E R++ ++ ++ L +LD LD + +D I ++I
Sbjct: 19 DFLRDRHVRFFQRCLQVLPE-RYSSLETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIY 77
Query: 72 ---------TQCIHPCG-------GVSASISHDP---------HILYTLSAVQIACLINR 106
+ CG G+ + S +P HI T + ++CLI
Sbjct: 78 SLQVLPTEDRSNLSRCGFRGSSYLGIPFNPSKNPGAAHPYDSGHIAMTYTG--LSCLIIL 135
Query: 107 EHEL-PVDK--IVAYVSKLQQPDGSFFGDMYG-EVDTRFSFCAVACLSLLGKLDAINLSK 162
+L VDK +A + LQ DGSF G E D RF +CA +L +++ K
Sbjct: 136 GDDLGRVDKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKK 195
Query: 163 AVEFILSCCNFDGGFGSRPGSESHAGLTYCCVGFLSITGHLHEI----DADKLAWWLAER 218
A+ +I ++D G G ESH G T+C + L + G L E+ + +++ W R
Sbjct: 196 AISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEKELNRIKRWCIMR 255
Query: 219 QLPSGGLNGRPEKLPDVCYSWWVLASLHMLGRGTWINSAALRKFILASQVR 269
Q G +GRP K D CYS+WV A+L +L + N R +IL++Q R
Sbjct: 256 Q--QNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQDR 304
>sp|Q5EAD5|PGTB1_BOVIN Geranylgeranyl transferase type-1 subunit beta OS=Bos taurus
GN=PGGT1B PE=2 SV=1
Length = 377
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 136/291 (46%), Gaps = 39/291 (13%)
Query: 13 EFLGTKHAEYIKKYSDNKEDYEYCMSEYLRMSGMYWGITTLSLLDQLDDMPQDTIFDFI- 71
+FL +H + ++ + Y E R++ ++ ++ L +LD LD + +D I ++I
Sbjct: 19 DFLRDRHVRFFQRCLQVLPE-RYSSLETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIY 77
Query: 72 ---------TQCIHPCG-------GVSASISHDP---------HILYTLSAVQIACLINR 106
++ CG G+ + S +P HI T + ++CL+
Sbjct: 78 SLQVLPTEDRSNLNRCGFRGSSYLGIPFNPSKNPGTAHPYDSGHIAMTYTG--LSCLVIL 135
Query: 107 EHELP-VDK--IVAYVSKLQQPDGSFFGDMYG-EVDTRFSFCAVACLSLLGKLDAINLSK 162
+L V+K +A + LQ DGSF G E D RF +CA +L +++ K
Sbjct: 136 GDDLSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKK 195
Query: 163 AVEFILSCCNFDGGFGSRPGSESHAGLTYCCVGFLSITGHLHEI----DADKLAWWLAER 218
A+ +I ++D G G ESH G T+C + L + G L E+ + +++ W R
Sbjct: 196 AINYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEKELNRIKRWCIMR 255
Query: 219 QLPSGGLNGRPEKLPDVCYSWWVLASLHMLGRGTWINSAALRKFILASQVR 269
Q G +GRP K D CYS+WV A+L +L + N R +IL++Q R
Sbjct: 256 Q--QNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQDR 304
>sp|P22007|FNTB_YEAST Protein farnesyltransferase subunit beta OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RAM1 PE=1
SV=2
Length = 431
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 110/231 (47%), Gaps = 12/231 (5%)
Query: 46 MYWGITTLSLLDQ--LDDMPQDTIFDFITQCIHPCGGVSASISHDPHILYTLSAVQIACL 103
+YW +L ++D+ L D + I D + G H+ T +A+ L
Sbjct: 110 LYWIANSLKVMDRDWLSDDTKRKIVDKLFTISPSGGPFGGGPGQLSHLASTYAAINALSL 169
Query: 104 INR----EHELPVDKIVAYVSKLQQPDGSFFGDM-YGEVDTRFSFCAVACLSLLGKLDAI 158
+ + I ++ L++P+G F + GEVDTR +CA++ +LL L
Sbjct: 170 CDNIDGCWDRIDRKGIYQWLISLKEPNGGFKTCLEVGEVDTRGIYCALSIATLLNILTEE 229
Query: 159 NLSKAVEFILSCCNFDGGFGSRPG-SESHAGLTYCCVGFLSITGHLHEIDADKLAWWLAE 217
+ ++ +C N++GGFGS P E+H G T+C L+I + +I+ +KL W +
Sbjct: 230 LTEGVLNYLKNCQNYEGGFGSCPHVDEAHGGYTFCATASLAILRSMDQINVEKLLEWSSA 289
Query: 218 RQL-PSGGLNGRPEKLPDVCYSWWVLAS---LHMLGRGTWINSAALRKFIL 264
RQL G GR KL D CYS+WV S L G G N ALR +IL
Sbjct: 290 RQLQEERGFCGRSNKLVDGCYSFWVGGSAAILEAFGYGQCFNKHALRDYIL 340
>sp|P53609|PGTB1_HUMAN Geranylgeranyl transferase type-1 subunit beta OS=Homo sapiens
GN=PGGT1B PE=1 SV=2
Length = 377
Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 158/354 (44%), Gaps = 51/354 (14%)
Query: 13 EFLGTKHAEYIKKYSDNKEDYEYCMSEYLRMSGMYWGITTLSLLDQLDDMPQDTIFDFI- 71
+FL +H + ++ + Y E R++ ++ ++ L +LD LD + +D I ++I
Sbjct: 19 DFLRDRHVRFFQRCLQVLPE-RYSSLETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIY 77
Query: 72 ---------TQCIHPCG-------GVSASISHDP---------HILYTLSAVQIACLINR 106
++ CG G+ + S P HI T + ++CL+
Sbjct: 78 SLQVLPTEDRSNLNRCGFRGSSYLGIPFNPSKAPGTAHPYDSGHIAMTYTG--LSCLVIL 135
Query: 107 EHELP-VDK--IVAYVSKLQQPDGSFFGDMYG-EVDTRFSFCAVACLSLLGKLDAINLSK 162
+L V+K +A + LQ DGSF G E D RF +CA +L +++ K
Sbjct: 136 GDDLSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKK 195
Query: 163 AVEFILSCCNFDGGFGSRPGSESHAGLTYCCVGFLSITGHLHEI----DADKLAWWLAER 218
A+ +I ++D G G ESH G T+C + L + G L E+ + +++ W R
Sbjct: 196 AITYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEKELNRIKRWCIMR 255
Query: 219 QLPSGGLNGRPEKLPDVCYSWWVLASLHMLGRGTWINSAALRKFILASQVRNTFYFEMGV 278
Q G +GRP K D CYS+WV A+L +L + N R +IL++Q R F
Sbjct: 256 Q--QNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQDRLVGGF--AK 311
Query: 279 FSDKIP--------VCGVHYVDYCTQVRNRIEQGCSVRTCISDRPLDIPDPFHT 324
+ D P +CG+ ++ ++ +V T S+R LD+ + T
Sbjct: 312 WPDSHPDALHAYFGICGLSLMEESGIC--KVHPALNVSTRTSERLLDLHQSWKT 363
>sp|Q55DA3|PGTB1_DICDI Geranylgeranyl transferase type-1 subunit beta OS=Dictyostelium
discoideum GN=pggt1b PE=2 SV=1
Length = 352
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 85/150 (56%), Gaps = 5/150 (3%)
Query: 121 KLQQPDGSFFGD-MYGEVDTRFSFCAVACLSLLGKLDAINLSKAVEFILSCCNFDGGFGS 179
+ ++ DG+ G G+ D R F A A +L AIN A+++I SC +++ FG
Sbjct: 147 RQRESDGAISGSPNVGDYDLRHLFSACAISFILDDWSAINKESAIDYIKSCLSYEFAFGQ 206
Query: 180 RPGSESHAGLTYCCVGFLSITGHLHEID--ADKLAWWLAERQLPSGGLNGRPEKLPDVCY 237
P E+H G TYC + LS+ G L ++ ++L +WL ++Q+ G GR K PD CY
Sbjct: 207 TPQQEAHGGPTYCAIASLSLLGRLDVLEPFKEQLTFWLVKKQIT--GFCGRTNKDPDTCY 264
Query: 238 SWWVLASLHMLGRGTWINSAALRKFILASQ 267
++W+ ASL M+ R I+ A++ FI ++Q
Sbjct: 265 AFWIGASLMMIDRYDLIDFASINAFIGSAQ 294
>sp|P32434|PGTB1_SCHPO Geranylgeranyl transferase type-1 subunit beta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cwg2 PE=3 SV=1
Length = 355
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 17/119 (14%)
Query: 163 AVEFILSCCNFDGGFGSRPGSESHAGLTYCCVGF------------LSITGHLHEI---- 206
++++I SC ++GGF P E+HAG T+C + L+ + + +
Sbjct: 172 SIQYIKSCQRYEGGFSLLPYGEAHAGATFCALASWSLILKMIPNSSLNTSNQSYNLMDCV 231
Query: 207 -DADKLAWWLAERQLPSGGLNGRPEKLPDVCYSWWVLASLHMLGRGTWINSAALRKFIL 264
++L WLA RQL SGGLNGR K D CY++WVL+SL +L +I+ L K++L
Sbjct: 232 PKVERLIRWLASRQLSSGGLNGRTNKDVDTCYAYWVLSSLKLLDALPFIDGGELEKYLL 290
>sp|P18898|PGTB1_YEAST Geranylgeranyl transferase type-1 subunit beta OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CDC43 PE=1
SV=2
Length = 376
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 117/279 (41%), Gaps = 84/279 (30%)
Query: 42 RMSGMYWGITTLSLLDQ---------------------LDDMPQDTIFDFITQCIHPCGG 80
RM+ +++ I+ LS+ D LDD I F+ G
Sbjct: 38 RMAIIFYSISGLSIFDVNVSAKYGDHLGWMRKHYIKTVLDDTENTVISGFV-------GS 90
Query: 81 VSASISHD-----PHILYTLSAVQIACLINREHE-----LPVDKIVAYVSKLQQPD-GSF 129
+ +I H P+ L+ L ++ ++ R++E L + +VSK Q+PD GSF
Sbjct: 91 LVMNIPHATTINLPNTLFAL----LSMIMLRDYEYFETILDKRSLARFVSKCQRPDRGSF 146
Query: 130 F---------GDMYGEVDTRFSFCAVACLSLLG---KLD---AINLSKAVEFILSCCNFD 174
G D RF + AVA L + G K D I+ K + +I+S ++
Sbjct: 147 VSCLDYKTNCGSSVDSDDLRFCYIAVAILYICGCRSKEDFDEYIDTEKLLGYIMSQQCYN 206
Query: 175 GGFGSRPGSESHAGLTYCCVGFLSITGHLHEIDADKLA----WWLAERQLPS-------- 222
G FG+ +E H+G T C + L++ L ++ +DK WL RQ+ S
Sbjct: 207 GAFGAH--NEPHSGYTSCALSTLALLSSLEKL-SDKFKEDTITWLLHRQVSSHGCMKFES 263
Query: 223 -----------GGLNGRPEKLPDVCYSWWVLASLHMLGR 250
GG GR K D CY++W L SLH+L +
Sbjct: 264 ELNASYDQSDDGGFQGRENKFADTCYAFWCLNSLHLLTK 302
>sp|Q9FJV8|PEN5_ARATH Marneral synthase OS=Arabidopsis thaliana GN=MRN1 PE=1 SV=1
Length = 761
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 106 REHELPVDKIVAYVSKLQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKL--DAINLSKA 163
+E E + K + Y+ LQ PDGS++G+ +G T + AV L+ GK ++ + +A
Sbjct: 587 KEIEKLIKKGLKYIEDLQMPDGSWYGN-WGVCFTYGTLFAVRGLAAAGKTFGNSEAIRRA 645
Query: 164 VEFILSCCNFDGGFGS 179
V+FIL+ N +GG+G
Sbjct: 646 VQFILNTQNAEGGWGE 661
>sp|O82146|BAMS2_PANGI Beta-Amyrin Synthase 2 OS=Panax ginseng GN=OSCPNY2 PE=2 SV=1
Length = 761
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 94 TLSAVQIACLINR--------EHELPVDKIVAYVSKLQQPDGSFFGDMYGEVDTRFSFCA 145
T SA+Q + + E E+ + V Y+ +Q PDGS++G+ +G T ++ A
Sbjct: 564 TSSAIQAMVMFKKLYPGHRKKEIEVSITNAVQYLEDIQMPDGSWYGN-WGVCFTYGTWFA 622
Query: 146 VACLSLLGKL--DAINLSKAVEFILSCCNFDGGFGS 179
+ L+ GK + L KAV+F++ DGG+G
Sbjct: 623 MGGLTAAGKTYNNCQTLHKAVDFLIKSQRSDGGWGE 658
>sp|E7DN63|BAMS_SOLLC Beta-amyrin synthase OS=Solanum lycopersicum GN=TTS1 PE=1 SV=1
Length = 761
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 12/105 (11%)
Query: 85 ISHDPHILYTLSAVQIACLINR--------EHELPVDKIVAYVSKLQQPDGSFFGDMYGE 136
I H+ ++ T S++Q L + E + +D V Y+ +Q PDGS++G+ +G
Sbjct: 556 IEHE-YVECTASSIQALVLFKKLYPGHRTKEINIFIDNAVKYLEDVQMPDGSWYGN-WGV 613
Query: 137 VDTRFSFCAVACLSLLGKL--DAINLSKAVEFILSCCNFDGGFGS 179
T S+ A+ L GK ++ + K VEF+L DGG+G
Sbjct: 614 CFTYGSWFALGGLVAAGKSYNNSAAVRKGVEFLLRTQRSDGGWGE 658
>sp|Q9SYN1|PEN6_ARATH Seco-amyrin synthase OS=Arabidopsis thaliana GN=PEN6 PE=1 SV=1
Length = 767
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 13/82 (15%)
Query: 105 NREHELPVDKIVAYVSKLQQPDGSFFGD-----MYGEVDTRFSFCAVACLSLLGKL--DA 157
E E + V Y+ Q PDGS++G+ MYG +F AV L GK +
Sbjct: 591 REEVEKFIKNAVKYIESFQMPDGSWYGNWGVCFMYG------TFFAVRGLVAAGKTYQNC 644
Query: 158 INLSKAVEFILSCCNFDGGFGS 179
+ KAV+FIL N +GG+G
Sbjct: 645 EPIRKAVQFILETQNVEGGWGE 666
>sp|Q948R6|IMFS_LUFCY Isomultiflorenol synthase OS=Luffa cylindrica GN=IMS1 PE=1 SV=1
Length = 759
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 70 FITQCIHPCGGVSASISHDPHILYTLSAVQIACLI------NREHELP--VDKIVAYVSK 121
+ + ++P + I H+ T SA+Q L +R E+ ++K V ++
Sbjct: 538 YWMEWLNPVEFLEDLIIEHQHVECTSSALQAILLFRKQYPGHRRKEINNFINKAVQFLQD 597
Query: 122 LQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKL--DAINLSKAVEFILSCCNFDGGFGS 179
+Q PDGS++G+ +G T ++ A+ LS+ GK + + K F+ N +GGFG
Sbjct: 598 IQLPDGSWYGN-WGICYTYGTWFALKALSMAGKTYENCEAVRKGANFLRKIQNPEGGFGE 656
>sp|O82140|BAMS1_PANGI Beta-Amyrin Synthase 1 OS=Panax ginseng GN=OSCPNY1 PE=1 SV=1
Length = 763
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 12/105 (11%)
Query: 85 ISHDPHILYTLSAVQIACLI------NREHELP--VDKIVAYVSKLQQPDGSFFGDMYGE 136
I H+ ++ T SA+Q L +R+ E+ + V Y+ Q PDGS++G+ +G
Sbjct: 558 IEHE-YVECTSSAIQALVLFKKLYPGHRKKEIDNFITNAVRYLEDTQMPDGSWYGN-WGV 615
Query: 137 VDTRFSFCAVACLSLLGK--LDAINLSKAVEFILSCCNFDGGFGS 179
T S+ A+ L+ GK + + KAVEF+L DGG+G
Sbjct: 616 CFTYGSWFALGGLAAAGKTYYNCAAVRKAVEFLLKSQMDDGGWGE 660
>sp|Q9LS68|PEN7_ARATH Putative pentacyclic triterpene synthase 7 OS=Arabidopsis thaliana
GN=PEN7 PE=5 SV=3
Length = 761
Score = 40.0 bits (92), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 106 REHELPVDKIVAYVSKLQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKL--DAINLSKA 163
+E E + K V Y+ LQ DGS++G+ +G +F AV L GK + +A
Sbjct: 587 KEIETFIAKAVKYIESLQMADGSWYGN-WGVCFIYATFFAVRGLVAAGKTYQSYEPIRRA 645
Query: 164 VEFILSCCNFDGGFGS 179
V+F+L N +GG+G
Sbjct: 646 VQFLLKIQNDEGGWGE 661
>sp|Q9C5M3|LUP1_ARATH Lupeol synthase 1 OS=Arabidopsis thaliana GN=LUP1 PE=1 SV=1
Length = 757
Score = 39.7 bits (91), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 77/192 (40%), Gaps = 39/192 (20%)
Query: 105 NREHELPVDKIVAYVSKLQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKL--DAINLSK 162
+E ++K V ++ Q PDGS++G+ +G ++ A+ L+ G+ D + +
Sbjct: 582 KKEINRSIEKAVQFIQDNQTPDGSWYGN-WGVCFIYATWFALGGLAAAGETYNDCLAMRN 640
Query: 163 AVEFILSCCNFDGGFGSRPGSESHAGLTYCCVGFLSITGHLHEIDADKLAWWLAERQLPS 222
V F+L+ DGG+G +LS + +R +PS
Sbjct: 641 GVHFLLTTQRDDGGWGE---------------SYLSCS---------------EQRYIPS 670
Query: 223 GGLNGRPEKLPDVCYSWWVLASLHM-LGRGTWINSAALRKFILASQVRNTFYFEMGVFSD 281
G E+ V SW ++A +H I K I+ SQ+ N + + +
Sbjct: 671 EG-----ERSNLVQTSWAMMALIHTGQAERDLIPLHRAAKLIINSQLENGDFPQQEIVGA 725
Query: 282 KIPVCGVHYVDY 293
+ C +HY Y
Sbjct: 726 FMNTCMLHYATY 737
>sp|E7DN64|DAMS_SOLLC Delta-amyrin synthase OS=Solanum lycopersicum GN=TTS2 PE=1 SV=1
Length = 763
Score = 39.3 bits (90), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 26/112 (23%)
Query: 85 ISHDPHILYTLSAVQIACLINR--------EHELPVDKIVAYVSKLQQPDGSFFGDMYGE 136
I H+ H+ T SA+Q + E + ++ V Y+ +Q+PDGS++G+
Sbjct: 556 IEHE-HVECTSSAIQALVRFKKLYPGHRTTEVDNFINNGVKYIEDVQEPDGSWYGN---- 610
Query: 137 VDTRFSFCAV-ACLSLLGKLDAINLS--------KAVEFILSCCNFDGGFGS 179
+ C + A LG L A+ LS K+VEF+L DGG+G
Sbjct: 611 ----WGVCFIYASWFALGGLAAVGLSYSNCAAVRKSVEFLLRTQRSDGGWGE 658
>sp|E2IUA9|LUPS_KALDA Lupeol synthase OS=Kalanchoe daigremontiana PE=1 SV=1
Length = 765
Score = 39.3 bits (90), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 12/105 (11%)
Query: 85 ISHDPHILYTLSAVQIACLINREHELPVDKIV--------AYVSKLQQPDGSFFGDMYGE 136
I H+ ++ T SAVQ L + + L K V Y+ +Q PDGS++G+ +G
Sbjct: 557 IEHE-YVECTSSAVQALVLFKKLYPLHRRKEVERFITNGAKYLEDIQMPDGSWYGN-WGV 614
Query: 137 VDTRFSFCAVACLSLLGKL--DAINLSKAVEFILSCCNFDGGFGS 179
T ++ A+ LS GK + + K V+F+L+ DGG+G
Sbjct: 615 CFTYGAWFALEGLSAAGKTYNNCAAVRKGVDFLLNIQLEDGGWGE 659
>sp|E2IUA8|FRIES_KALDA Friedelin synthase OS=Kalanchoe daigremontiana PE=1 SV=1
Length = 767
Score = 39.3 bits (90), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 12/105 (11%)
Query: 85 ISHDPHILYTLSAVQIACLINREHELPVDKIV--------AYVSKLQQPDGSFFGDMYGE 136
I H+ ++ T SAVQ L + + L K V Y+ +Q PDGS++G+ +G
Sbjct: 557 IEHE-YVECTSSAVQALVLFKKLYPLHRRKEVERFITNGAKYLEDIQMPDGSWYGN-WGV 614
Query: 137 VDTRFSFCAVACLSLLGKL--DAINLSKAVEFILSCCNFDGGFGS 179
T ++ A+ LS GK + + K V+F+L+ DGG+G
Sbjct: 615 CFTYGAWFALEGLSAAGKTYNNCAAVRKGVDFLLNIQLEDGGWGE 659
>sp|A8CDT3|LUPS_BRUGY Lupeol synthase OS=Bruguiera gymnorhiza GN=LUS PE=1 SV=1
Length = 761
Score = 38.9 bits (89), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 106 REHELPVDKIVAYVSKLQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGK--LDAINLSKA 163
+E E+ + V + ++QQPDGS++G+ +G ++ + L+ GK + + K
Sbjct: 584 KEIEIFILNAVRFTEEIQQPDGSWYGN-WGICFLSGTWFGLKGLAAAGKTYYNCTAVRKG 642
Query: 164 VEFILSCCNFDGGFGS 179
VEF+L DGG+G
Sbjct: 643 VEFLLQTQRDDGGWGE 658
>sp|Q9FZI2|LUP5_ARATH Lupeol synthase 5 OS=Arabidopsis thaliana GN=LUP5 PE=2 SV=1
Length = 763
Score = 38.9 bits (89), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 45/194 (23%)
Query: 106 REHELPVDKIVAYVSKLQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKL--DAINLSKA 163
+E ++K V ++ Q DGS++G +G T ++ A+ L+ +GK + +++
Sbjct: 586 KEITKSIEKAVQFIESKQLRDGSWYGS-WGICFTYGTWFALCGLAAIGKTYNNCLSMRDG 644
Query: 164 VEFILSCCNFDGGFGSRPGSESHAGLTYCCVGFLSITGHLHEIDADKLAWWLAERQLPSG 223
V F+L+ N DGG+G ES+ +R +P
Sbjct: 645 VHFLLNIQNEDGGWG-----ESYMSCP-------------------------EQRYIPLE 674
Query: 224 GLNGRPEKLPDVCYSWWVLASLHMLGRGTW----INSAALRKFILASQVRNTFYFEMGVF 279
G +V + W + +L G+ ++SAA KFI+ SQ+ N + + +
Sbjct: 675 G------NRSNVVQTAWAMMALIHAGQAKRDLIPLHSAA--KFIITSQLENGDFPQQELL 726
Query: 280 SDKIPVCGVHYVDY 293
+ C +HY Y
Sbjct: 727 GASMSTCMLHYSTY 740
>sp|A8C980|GERS_RHISY Germanicol synthase OS=Rhizophora stylosa GN=M1 PE=1 SV=1
Length = 759
Score = 38.9 bits (89), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 105 NREHELPVDKIVAYVSKLQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKL--DAINLSK 162
+E E + K V ++ +Q DG+++G+ +G T ++ A+ L+ GK + + K
Sbjct: 584 KKEIEDFIAKSVRFLESIQTSDGTWYGN-WGVCFTYGTWFALGGLAAAGKTYNSCLAMRK 642
Query: 163 AVEFILSCCNFDGGFGSR----------PGSESHAGLTYCCVGFLSITGHLHEIDAD 209
AV+F+L DGG+G P +H+ L + +++ H ++D D
Sbjct: 643 AVDFLLRIQKDDGGWGESYLSCPEKKYVPLEANHSNLVHTAWAMMALV-HAGQMDRD 698
>sp|Q8W3Z1|BAMS_BETPL Beta-amyrin synthase OS=Betula platyphylla GN=OSCBPY PE=1 SV=1
Length = 779
Score = 38.5 bits (88), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 12/105 (11%)
Query: 85 ISHDPHILYTLSAVQIACLINR--------EHELPVDKIVAYVSKLQQPDGSFFGDMYGE 136
I H+ +I T SA+Q L + E E + ++ +Q PDGS++G+ +G
Sbjct: 557 IEHE-YIECTASAMQTLVLFKKLYPGHRKKEIENFIKNAAQFLQVIQMPDGSWYGN-WGV 614
Query: 137 VDTRFSFCAVACLSLLGKL--DAINLSKAVEFILSCCNFDGGFGS 179
T ++ A+ L+ +GK + + + +AV+F+L +GG+G
Sbjct: 615 CFTYGTWFALGGLAAVGKTYNNCLAVRRAVDFLLRAQRDNGGWGE 659
>sp|E2IUB0|CASS_KALDA Cycloartenol synthase OS=Kalanchoe daigremontiana PE=1 SV=1
Length = 764
Score = 38.1 bits (87), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 25/159 (15%)
Query: 89 PHILYTLSAVQIACLINREH--------ELPVDKIVAYVSKLQQPDGSFFGDMYGEVDTR 140
P++ T +A+Q L + H EL + K A++ K+Q+ DGS++G + T
Sbjct: 559 PYVECTSAALQSLVLFKKLHPEHRKEEVELCIKKAAAFIEKIQESDGSWYGS-WAVCFTY 617
Query: 141 FSFCAVACLSLLGK--LDAINLSKAVEFILSCCNFDGGFGSR------------PGSESH 186
++ V L G+ ++ ++ KA +F+LS GG+G PG SH
Sbjct: 618 GTWFGVLGLVAAGRNYKNSPSIRKACDFLLSKQLASGGWGESYLSCQNKVYTNIPGGRSH 677
Query: 187 AGLTYCCVGFLSITGHLHE--IDADKLAWWLAERQLPSG 223
T + L G + + A +L E QL +G
Sbjct: 678 VVNTGWAMLALIGAGQAERDPVPLHRAAKFLIESQLENG 716
>sp|E2IUA7|GLUTS_KALDA Glutinol synthase OS=Kalanchoe daigremontiana PE=1 SV=1
Length = 767
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 12/105 (11%)
Query: 85 ISHDPHILYTLSAVQIACLINREH--------ELPVDKIVAYVSKLQQPDGSFFGDMYGE 136
I H+ ++ T SAVQ L + H E + Y+ +Q PDG+++G+ +G
Sbjct: 557 IEHE-YVECTSSAVQALVLFKKLHPGHRRKEVERFITNGAKYIEDIQMPDGAWYGN-WGV 614
Query: 137 VDTRFSFCAVACLSLLGKL--DAINLSKAVEFILSCCNFDGGFGS 179
T ++ A+ L+ GK + + K V+F+L DGG+G
Sbjct: 615 CFTYGAWFALGGLAAAGKTYNNCAAVRKGVDFLLRIQLEDGGWGE 659
>sp|O23390|BARS1_ARATH Baruol synthase OS=Arabidopsis thaliana GN=BARS1 PE=1 SV=2
Length = 759
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 105 NREHELPVDKIVAYVSKLQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKL--DAINLSK 162
E E + K V Y+ LQ DGS++G+ +G +F AV L GK + + +
Sbjct: 585 KEEVERFITKGVKYIEDLQMVDGSWYGN-WGVCFIYGTFFAVRGLVAAGKCYNNCEAIRR 643
Query: 163 AVEFILSCCNFDGGFGS 179
AV FIL N +GG+G
Sbjct: 644 AVRFILDTQNTEGGWGE 660
>sp|Q764T8|LUPS_GLYGL Lupeol synthase OS=Glycyrrhiza glabra GN=LUS1 PE=1 SV=1
Length = 758
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 112 VDKIVAYVSKLQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGK--LDAINLSKAVEFILS 169
+ K + Y+ +Q PDGS++G +G T ++ AV L+ GK ++++L KA +F+LS
Sbjct: 588 IAKAIRYIENMQNPDGSWYG-CWGICYTYGTWFAVEGLTACGKNCHNSLSLRKACQFLLS 646
Query: 170 CCNFDGGFG 178
+ G+G
Sbjct: 647 KQLPNAGWG 655
>sp|Q08IT1|DADIS_PANGI Dammarenediol II synthase OS=Panax ginseng GN=PNA PE=1 SV=1
Length = 769
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 105 NREHELPVDKIVAYVSKLQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKL--DAINLSK 162
+E E V K + Y+ + Q PDGS++G +G +F ++ + G+ ++ + K
Sbjct: 588 QKEIEDSVAKAIRYLERNQMPDGSWYG-FWGICFLYGTFFTLSGFASAGRTYDNSEAVRK 646
Query: 163 AVEFILSCCNFDGGFGS 179
V+F LS N +GG+G
Sbjct: 647 GVKFFLSTQNEEGGWGE 663
>sp|Q9MB42|BAMS_GLYGL Beta-amyrin synthase OS=Glycyrrhiza glabra GN=GgbAS1 PE=1 SV=1
Length = 765
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 94 TLSAVQIACLINR--------EHELPVDKIVAYVSKLQQPDGSFFGDMYGEVDTRFSFCA 145
T SA+Q L + E E + V ++ Q DGS++G+ +G T S+ A
Sbjct: 565 TGSAIQALVLFKKLYPGHRKKEIENFIANAVRFLEDTQTADGSWYGN-WGVCFTYGSWFA 623
Query: 146 VACLSLLGKLDA--INLSKAVEFILSCCNFDGGFGS 179
+ L+ GK A + KAV+F+L+ DGG+G
Sbjct: 624 LGGLAAAGKTFANCAAIRKAVKFLLTTQREDGGWGE 659
>sp|F8WQD0|SHS1_ASTTA Shionone synthase OS=Aster tataricus GN=SHS1 PE=1 SV=1
Length = 761
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 106 REHELPVDKIVAYVSKLQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKL--DAINLSKA 163
+E E + Y+ Q PDGS++G+ +G T ++ A+ L+ + K + ++ KA
Sbjct: 584 KEVESFLTNAARYLDNTQMPDGSWYGE-WGICFTYGTYYALGGLAAIEKTYENCQSIRKA 642
Query: 164 VEFILSCCNFDGGFGS 179
V F+L DGG+G
Sbjct: 643 VRFLLKTQGEDGGWGE 658
>sp|P33990|SQHC_ZYMMO Squalene--hopene cyclase OS=Zymomonas mobilis subsp. mobilis
(strain ATCC 31821 / ZM4 / CP4) GN=shc PE=3 SV=2
Length = 658
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 23/125 (18%)
Query: 116 VAYVSKLQQPDGSFFGD-----MYGEVDTRFSFCAVACLSLLGKLDAINLSKAVEFILSC 170
V Y+ K Q+ DGS+FG +YG T + CA+ +L D + + KAV ++ +
Sbjct: 490 VDYLLKEQEEDGSWFGRWGVNYIYG---TWSALCALNVAAL--PHDHLAIQKAVAWLKTI 544
Query: 171 CNFDGGFGS------------RPGSESHAGLTYCCVGFLSITGHLHEIDADKLAWWLAER 218
N DGG+G P + + + +G +++ G + K WLA+
Sbjct: 545 QNEDGGWGENCDSYALDYSGYEPMDSTASQTAWALLGLMAV-GEANSEAVTKGINWLAQN 603
Query: 219 QLPSG 223
Q G
Sbjct: 604 QDEEG 608
>sp|P54924|SQHC_BRAJA Squalene--hopene cyclase OS=Bradyrhizobium japonicum (strain USDA
110) GN=shc PE=3 SV=2
Length = 660
Score = 36.6 bits (83), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 116 VAYVSKLQQPDGSFFGDMYGEVDTRFSFCAVACLSLLG-KLDAINLSKAVEFILSCCNFD 174
VAY+ K Q P+GS++G +G ++ + L++ G + D + KA +++ S N D
Sbjct: 492 VAYLRKTQHPEGSWYG-RWGMNFIYGTWSVLCALNMAGVRHDDPMIRKAADWLASIQNKD 550
Query: 175 GGFGS 179
GG+G
Sbjct: 551 GGWGE 555
>sp|Q9FI37|PEN4_ARATH Thalianol synthase OS=Arabidopsis thaliana GN=THAS1 PE=1 SV=2
Length = 766
Score = 36.6 bits (83), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 99 QIACLINREHELPVDKIVAYVSKLQQPDGSFFGDMYGEVDTRFSFCAVACLSLLGKL--D 156
Q N E + + K Y+ +Q DGS++G+ +G +F AV L GK +
Sbjct: 584 QFPGYKNVEVKRFITKAAKYIEDMQTVDGSWYGN-WGVCFIYGTFFAVRGLVAAGKTYSN 642
Query: 157 AINLSKAVEFILSCCNFDGGFGS 179
+ KAV F+L N +GG+G
Sbjct: 643 CEAIRKAVRFLLDTQNPEGGWGE 665
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.456
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143,692,745
Number of Sequences: 539616
Number of extensions: 6181333
Number of successful extensions: 15250
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 15027
Number of HSP's gapped (non-prelim): 124
length of query: 358
length of database: 191,569,459
effective HSP length: 119
effective length of query: 239
effective length of database: 127,355,155
effective search space: 30437882045
effective search space used: 30437882045
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 62 (28.5 bits)