BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15439
(124 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|189234898|ref|XP_967153.2| PREDICTED: similar to lim homeobox protein, partial [Tribolium
castaneum]
Length = 368
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 41/53 (77%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
CG C RPI DR+LLR+ D+SYHE+CV C CG L H+CF +++KLYCR DYD
Sbjct: 3 CGMCCRPINDRFLLRIMDVSYHEHCVQCCACGDRLHHTCFVKDSKLYCRLDYD 55
>gi|91077954|ref|XP_967240.1| PREDICTED: similar to CG32105 CG32105-PB [Tribolium castaneum]
Length = 472
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 41/53 (77%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C CG+ I DRYL+RVAD S+HE+C+ C CG LAHSC+TR KLYC++DYD
Sbjct: 128 CEGCGQKIHDRYLMRVADASWHEHCLTCSICGVQLAHSCYTRNTKLYCKADYD 180
>gi|270002859|gb|EEZ99306.1| LIM homeobox transcription factor 1, beta [Tribolium castaneum]
Length = 388
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 41/53 (77%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C CG+ I DRYL+RVAD S+HE+C+ C CG LAHSC+TR KLYC++DYD
Sbjct: 44 CEGCGQKIHDRYLMRVADASWHEHCLTCSICGVQLAHSCYTRNTKLYCKADYD 96
>gi|242007292|ref|XP_002424475.1| Insulin gene enhancer protein ISL-2, putative [Pediculus humanus
corporis]
gi|212507893|gb|EEB11737.1| Insulin gene enhancer protein ISL-2, putative [Pediculus humanus
corporis]
Length = 396
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 43/59 (72%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
M +K CG C I DRYL+RVAD+ YHE C+ C CG L+H+CFTR++KLYCR DYD
Sbjct: 1 MAELKICGICCGSICDRYLMRVADVFYHERCLLCSVCGIRLSHTCFTRDSKLYCRLDYD 59
>gi|307204532|gb|EFN83212.1| LIM homeobox transcription factor 1 beta [Harpegnathos saltator]
Length = 402
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 41/53 (77%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C CGR I D+Y++RVA+ +YHE C++C CG L+HSCF R+ KLYCRSDY+
Sbjct: 59 CAGCGRTIADKYVMRVAERNYHEECLSCTACGAMLSHSCFIRDLKLYCRSDYE 111
>gi|332025158|gb|EGI65338.1| LIM homeobox transcription factor 1-beta [Acromyrmex echinatior]
Length = 400
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 41/53 (77%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C CGR I D+Y++RVA+ +YHE C++C CG L+HSCF R+ KLYCRSDY+
Sbjct: 56 CAGCGRTIADKYVMRVAERNYHEECLSCTACGAMLSHSCFIRDLKLYCRSDYE 108
>gi|198464778|ref|XP_001353365.2| GA18112 [Drosophila pseudoobscura pseudoobscura]
gi|198149875|gb|EAL30872.2| GA18112 [Drosophila pseudoobscura pseudoobscura]
Length = 553
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
P M C C RPI+DRY++RV D S+HE C+ C C L HSC+ RE KLYCR DY+
Sbjct: 204 PPMNNCAHCCRPISDRYIMRVVDNSFHEGCLKCTACSLHLVHSCYAREGKLYCRIDYE 261
>gi|170032117|ref|XP_001843929.1| lim homeobox protein [Culex quinquefasciatus]
gi|167871878|gb|EDS35261.1| lim homeobox protein [Culex quinquefasciatus]
Length = 453
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 38/53 (71%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
CG C PI DRY+++V DISYHENC+ C C L HSCF R+ KLYCR DY+
Sbjct: 6 CGQCCSPICDRYIMKVVDISYHENCLQCTSCAIRLMHSCFMRDGKLYCRFDYE 58
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 7 CGSCGRPI-TDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYD 59
C CG I D ++R D +H C CV CG L ++++L+CR DY+
Sbjct: 66 CLGCGEKIGADELVMRALDNVFHLKCFICVVCGIRLQKGDQYVIKQSQLFCRPDYE 121
>gi|195160501|ref|XP_002021114.1| GL25001 [Drosophila persimilis]
gi|194118227|gb|EDW40270.1| GL25001 [Drosophila persimilis]
Length = 458
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
P M C C RPI+DRY++RV D S+HE C+ C C L HSC+ RE KLYCR DY+
Sbjct: 206 PPMNNCAHCCRPISDRYIMRVVDNSFHEGCLKCTACSLHLVHSCYAREGKLYCRIDYE 263
>gi|307189897|gb|EFN74141.1| LIM homeobox transcription factor 1 beta [Camponotus floridanus]
Length = 402
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 41/53 (77%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C CGR I D+Y++RVA+ +YHE C++C CG L+HSCF R+ KLYCRSDY+
Sbjct: 58 CAGCGRTIADKYVMRVAERNYHEECLSCTVCGAMLSHSCFIRDLKLYCRSDYE 110
>gi|242007294|ref|XP_002424476.1| Homeobox protein ceh-14, putative [Pediculus humanus corporis]
gi|212507894|gb|EEB11738.1| Homeobox protein ceh-14, putative [Pediculus humanus corporis]
Length = 389
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 40/53 (75%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C CG+ I DRYL+RV D S+HE+C++C CG L+HSC+TR KLYC+ DYD
Sbjct: 29 CEGCGQKIHDRYLMRVGDTSWHEHCLSCNVCGVLLSHSCYTRSGKLYCKQDYD 81
>gi|270002858|gb|EEZ99305.1| LIM homeobox transcription factor 1, beta 2 [Tribolium castaneum]
Length = 353
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 39/50 (78%)
Query: 10 CGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C RPI DR+LLR+ D+SYHE+CV C CG L H+CF +++KLYCR DYD
Sbjct: 2 CCRPINDRFLLRIMDVSYHEHCVQCCACGDRLHHTCFVKDSKLYCRLDYD 51
>gi|322785895|gb|EFZ12514.1| hypothetical protein SINV_13953 [Solenopsis invicta]
Length = 144
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C CGR I D+Y++RVA+ +YHE C++C CG L+HSCF R+ KLYCR+DY+
Sbjct: 18 CAGCGRTIADKYVMRVAERNYHEECLSCTACGAMLSHSCFIRDLKLYCRTDYE 70
>gi|391342699|ref|XP_003745653.1| PREDICTED: LIM/homeobox protein Lhx1-like [Metaseiulus
occidentalis]
Length = 405
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/58 (53%), Positives = 37/58 (63%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D S+H CV C +C SL CF+R+ KLYCRSD+ R
Sbjct: 3 MVHCAGCERPILDRFLLHVLDRSWHAKCVQCTDCRCSLIEKCFSRDGKLYCRSDFYKR 60
>gi|157118342|ref|XP_001653180.1| lim homeobox protein [Aedes aegypti]
gi|108883303|gb|EAT47528.1| AAEL001380-PA [Aedes aegypti]
Length = 387
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 38/57 (66%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
N CG C PI DRY+++V DISYHE C+ C C L HSCF R+ KLYCR DY+
Sbjct: 122 NTTLCGQCCSPICDRYIMKVVDISYHERCLQCTSCAIRLMHSCFMRDGKLYCRFDYE 178
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 7 CGSCGRPI-TDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYD 59
C CG I D ++R D +H C CV CG L ++++L+CR DY+
Sbjct: 186 CLGCGEKIGADELVMRALDNVFHLKCFICVVCGVRLQKGDQYVIKQSQLFCRPDYE 241
>gi|195012851|ref|XP_001983760.1| GH15398 [Drosophila grimshawi]
gi|193897242|gb|EDV96108.1| GH15398 [Drosophila grimshawi]
Length = 618
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 39/57 (68%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
N + C CG+ I DRYL+ V D ++HE C+AC CG L H+C+ R +KLYC+ DYD
Sbjct: 251 NYELCEGCGQKIHDRYLMNVGDANWHEQCLACCYCGLQLHHTCYVRNSKLYCKQDYD 307
>gi|345132131|gb|AEN75258.1| Lim1 [Neanthes arenaceodentata]
Length = 498
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 37/58 (63%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV CVEC +L CF+R+ KLYCR D+ R
Sbjct: 23 MVMCAGCERPILDRFLLNVLDRAWHAKCVQCVECRSNLTDKCFSRDGKLYCREDFFRR 80
>gi|195376257|ref|XP_002046913.1| GJ13148 [Drosophila virilis]
gi|194154071|gb|EDW69255.1| GJ13148 [Drosophila virilis]
Length = 588
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 39/57 (68%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
N + C CG+ I DRYL+ V D ++HE C+AC CG L H+C+ R +KLYC+ DYD
Sbjct: 220 NYELCEGCGQKIHDRYLMNVGDANWHEQCLACCYCGMQLHHTCYVRNSKLYCKLDYD 276
>gi|194869797|ref|XP_001972523.1| GG15572 [Drosophila erecta]
gi|190654306|gb|EDV51549.1| GG15572 [Drosophila erecta]
Length = 652
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
N + C CG+ I DR+L+ V D ++HE C+AC CG L H+C+ R +KLYC+ DYD
Sbjct: 279 NFELCEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHHTCYVRNSKLYCKMDYD 335
>gi|195493808|ref|XP_002094572.1| GE21898 [Drosophila yakuba]
gi|194180673|gb|EDW94284.1| GE21898 [Drosophila yakuba]
Length = 642
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
N + C CG+ I DR+L+ V D ++HE C+AC CG L H+C+ R +KLYC+ DYD
Sbjct: 271 NFELCEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHHTCYVRNSKLYCKMDYD 327
>gi|195126146|ref|XP_002007535.1| GI13003 [Drosophila mojavensis]
gi|193919144|gb|EDW18011.1| GI13003 [Drosophila mojavensis]
Length = 607
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 39/57 (68%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
N + C CG+ I DRYL+ V D ++HE C+AC CG L H+C+ R +KLYC+ DYD
Sbjct: 240 NYELCEGCGQKIHDRYLMNVGDANWHEQCLACCYCGMQLHHTCYVRNSKLYCKLDYD 296
>gi|195327101|ref|XP_002030260.1| GM25340 [Drosophila sechellia]
gi|194119203|gb|EDW41246.1| GM25340 [Drosophila sechellia]
Length = 637
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
N + C CG+ I DR+L+ V D ++HE C+AC CG L H+C+ R +KLYC+ DYD
Sbjct: 270 NFELCEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHHTCYVRNSKLYCKMDYD 326
>gi|195589796|ref|XP_002084635.1| GD14373 [Drosophila simulans]
gi|194196644|gb|EDX10220.1| GD14373 [Drosophila simulans]
Length = 642
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
N + C CG+ I DR+L+ V D ++HE C+AC CG L H+C+ R +KLYC+ DYD
Sbjct: 273 NFELCEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHHTCYVRNSKLYCKMDYD 329
>gi|24663250|ref|NP_729801.1| CG32105, isoform B [Drosophila melanogaster]
gi|23093601|gb|AAF49930.2| CG32105, isoform B [Drosophila melanogaster]
gi|28316896|gb|AAO39470.1| RE70810p [Drosophila melanogaster]
Length = 640
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
N + C CG+ I DR+L+ V D ++HE C+AC CG L H+C+ R +KLYC+ DYD
Sbjct: 271 NFELCEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHHTCYVRNSKLYCKMDYD 327
>gi|442631924|ref|NP_001261754.1| CG32105, isoform C [Drosophila melanogaster]
gi|440215685|gb|AGB94447.1| CG32105, isoform C [Drosophila melanogaster]
Length = 639
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
N + C CG+ I DR+L+ V D ++HE C+AC CG L H+C+ R +KLYC+ DYD
Sbjct: 270 NFELCEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHHTCYVRNSKLYCKMDYD 326
>gi|195440764|ref|XP_002068210.1| GK10148 [Drosophila willistoni]
gi|194164295|gb|EDW79196.1| GK10148 [Drosophila willistoni]
Length = 636
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
N + C CG+ I DRYL+ V + ++HE C+AC CG L H+C+ R +KLYC+ DYD
Sbjct: 266 NYELCEGCGQKIHDRYLMNVGEANWHEQCLACCYCGMQLHHTCYVRNSKLYCKLDYD 322
>gi|281366134|ref|NP_648567.2| CG4328 [Drosophila melanogaster]
gi|211938623|gb|ACJ13208.1| FI06571p [Drosophila melanogaster]
gi|272455176|gb|AAF49932.2| CG4328 [Drosophila melanogaster]
Length = 544
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
P + +C C +PI DRY++RV + S+HE C+ C C L HSC+ RE KLYCR DY+
Sbjct: 194 PQLSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCRVDYE 251
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 7 CGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRKK 63
C CG I D ++R + +H C ACV CG L ++ +L+CR DY+ K+
Sbjct: 259 CLGCGLKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFDYE--KE 316
Query: 64 GSQLVTVLFYS 74
L FY
Sbjct: 317 VEMLQGYDFYG 327
>gi|296482212|tpg|DAA24327.1| TPA: LIM homeobox transcription factor 1, beta-like [Bos taurus]
Length = 1019
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 668 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 724
>gi|195160505|ref|XP_002021116.1| GL25169 [Drosophila persimilis]
gi|194118229|gb|EDW40272.1| GL25169 [Drosophila persimilis]
Length = 613
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
N + C CG+ I DRYL+ V + ++HE C+AC CG L H+C+ R +KLYC+ DYD
Sbjct: 246 NFELCEGCGQKIHDRYLMNVGEANWHEQCLACCYCGMQLHHTCYVRSSKLYCKMDYD 302
>gi|198464782|ref|XP_001353366.2| GA16684 [Drosophila pseudoobscura pseudoobscura]
gi|198149877|gb|EAL30873.2| GA16684 [Drosophila pseudoobscura pseudoobscura]
Length = 620
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
N + C CG+ I DRYL+ V + ++HE C+AC CG L H+C+ R +KLYC+ DYD
Sbjct: 253 NFELCEGCGQKIHDRYLMNVGEANWHEQCLACCYCGMQLHHTCYVRSSKLYCKMDYD 309
>gi|145587040|gb|ABP87885.1| IP01439p [Drosophila melanogaster]
Length = 467
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
P + +C C +PI DRY++RV + S+HE C+ C C L HSC+ RE KLYCR DY+
Sbjct: 117 PQLSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCRVDYE 174
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 7 CGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRKK 63
C CG I D ++R + +H C ACV CG L ++ +L+CR DY+ K+
Sbjct: 182 CLGCGLKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFDYE--KE 239
Query: 64 GSQLVTVLFYS 74
L FY
Sbjct: 240 VEMLQGYDFYG 250
>gi|194869786|ref|XP_001972521.1| GG13839 [Drosophila erecta]
gi|190654304|gb|EDV51547.1| GG13839 [Drosophila erecta]
Length = 531
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
P + +C C +PI DRY++RV + S+HE C+ C C L HSC+ RE KLYCR DY+
Sbjct: 181 PQLSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCRVDYE 238
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 7 CGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRKK 63
C CG I D ++R + +H C ACV CG L ++ +L+CR DY+ K+
Sbjct: 246 CLGCGLKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFDYE--KE 303
Query: 64 GSQLVTVLFYS 74
L FY
Sbjct: 304 VEMLQGYDFYG 314
>gi|158292635|ref|XP_314022.4| AGAP005138-PA [Anopheles gambiae str. PEST]
gi|157017084|gb|EAA44525.4| AGAP005138-PA [Anopheles gambiae str. PEST]
Length = 456
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 37/53 (69%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
CG C PI DRY+++V DI+YHE C+ C C L HSCF R+ KLYCR DY+
Sbjct: 150 CGQCCGPICDRYIMKVVDITYHERCLQCTSCSIRLMHSCFMRDGKLYCRFDYE 202
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 7 CGSCGRPI-TDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYD 59
C CG I D ++R D +H C CV CG L ++++L+CR DY+
Sbjct: 210 CLGCGEKIGADELVMRALDNVFHLKCFICVVCGVRLQKGDQYVIKQSQLFCRPDYE 265
>gi|195589788|ref|XP_002084631.1| GD12730 [Drosophila simulans]
gi|194196640|gb|EDX10216.1| GD12730 [Drosophila simulans]
Length = 527
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
P + +C C +PI DRY++RV + S+HE C+ C C L HSC+ RE KLYCR DY+
Sbjct: 177 PQLSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCRVDYE 234
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 7 CGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRKK 63
C CG I D ++R + +H C ACV CG L ++ +L+CR DY+ K+
Sbjct: 242 CLGCGLKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFDYE--KE 299
Query: 64 GSQLVTVLFYS 74
L FY
Sbjct: 300 VEMLQGYDFYG 310
>gi|195327095|ref|XP_002030257.1| GM24666 [Drosophila sechellia]
gi|194119200|gb|EDW41243.1| GM24666 [Drosophila sechellia]
Length = 527
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
P + +C C +PI DRY++RV + S+HE C+ C C L HSC+ RE KLYCR DY+
Sbjct: 177 PQLSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCRVDYE 234
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 7 CGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRKK 63
C CG I D ++R + +H C ACV CG L ++ +L+CR DY+ K+
Sbjct: 242 CLGCGLKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFDYE--KE 299
Query: 64 GSQLVTVLFYS 74
L FY
Sbjct: 300 VEMLQGYDFYG 310
>gi|195493804|ref|XP_002094570.1| GE20130 [Drosophila yakuba]
gi|194180671|gb|EDW94282.1| GE20130 [Drosophila yakuba]
Length = 540
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
P + +C C +PI DRY++RV + S+HE C+ C C L HSC+ RE KLYCR DY+
Sbjct: 190 PQLSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCRVDYE 247
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 7 CGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRKK 63
C CG I D ++R + +H C ACV CG L ++ +L+CR DY+ K+
Sbjct: 255 CLGCGLKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFDYE--KE 312
Query: 64 GSQLVTVLFYS 74
L FY
Sbjct: 313 VEMLQGYDFYG 323
>gi|359070468|ref|XP_002691651.2| PREDICTED: uncharacterized protein LOC100337389 [Bos taurus]
Length = 779
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 428 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 484
>gi|345790894|ref|XP_543409.3| PREDICTED: LIM/homeobox protein Lhx5 [Canis lupus familiaris]
Length = 402
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRR 59
>gi|354497499|ref|XP_003510857.1| PREDICTED: LIM/homeobox protein Lhx5-like [Cricetulus griseus]
gi|344257745|gb|EGW13849.1| LIM/homeobox protein Lhx5 [Cricetulus griseus]
Length = 402
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRR 59
>gi|340711972|ref|XP_003394539.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Bombus
terrestris]
Length = 402
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C CGR I D+Y+++VA +YHE C++C C L HSCF RE KLYCR+DY+
Sbjct: 58 CAGCGRTIVDKYVMQVAGRNYHEECLSCAACATPLTHSCFIRELKLYCRNDYE 110
>gi|351694748|gb|EHA97666.1| LIM/homeobox protein Lhx5 [Heterocephalus glaber]
Length = 402
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRR 59
>gi|311270693|ref|XP_003132949.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5-like
[Sus scrofa]
Length = 402
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECXTNLSEKCFSREGKLYCKNDFFRR 59
>gi|291407015|ref|XP_002719805.1| PREDICTED: LIM homeobox protein 5 [Oryctolagus cuniculus]
Length = 402
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRR 59
>gi|431914229|gb|ELK15487.1| LIM/homeobox protein Lhx5 [Pteropus alecto]
Length = 402
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRR 59
>gi|395833990|ref|XP_003790000.1| PREDICTED: LIM/homeobox protein Lhx5 [Otolemur garnettii]
Length = 402
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRR 59
>gi|6678690|ref|NP_032525.1| LIM/homeobox protein Lhx5 [Mus musculus]
gi|20514764|ref|NP_620605.1| LIM/homeobox protein Lhx5 [Rattus norvegicus]
gi|47606426|sp|P61376.1|LHX5_RAT RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox
protein 5; AltName: Full=Homeobox protein LIM-2
gi|47606427|sp|P61375.1|LHX5_MOUSE RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox
protein 5
gi|531220|gb|AAA62162.1| amino acid feature: homeodomain, bp 895 .. 1074; amino acid
feature: LIM1, bp 373 .. 516; amino acid feature: LIM2,
bp 550 .. 705 [Rattus norvegicus]
gi|1388183|gb|AAC52842.1| LIM/homeodomain [Mus musculus]
gi|26329557|dbj|BAC28517.1| unnamed protein product [Mus musculus]
gi|26339568|dbj|BAC33455.1| unnamed protein product [Mus musculus]
gi|34784227|gb|AAH57585.1| LIM homeobox protein 5 [Mus musculus]
gi|74148661|dbj|BAE24281.1| unnamed protein product [Mus musculus]
gi|148687827|gb|EDL19774.1| LIM homeobox protein 5 [Mus musculus]
gi|149063463|gb|EDM13786.1| LIM homeobox protein 5 [Rattus norvegicus]
Length = 402
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRR 59
>gi|348551170|ref|XP_003461403.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5-like
[Cavia porcellus]
Length = 404
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRR 59
>gi|194747127|ref|XP_001956004.1| GF24815 [Drosophila ananassae]
gi|190623286|gb|EDV38810.1| GF24815 [Drosophila ananassae]
Length = 613
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 39/57 (68%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
N + C CG+ I DR+L+ V + ++HE C+AC CG L H+C+ R +KLYC+ DYD
Sbjct: 245 NFELCEGCGQKIHDRFLMNVGEANWHEQCLACCYCGLQLHHTCYVRNSKLYCKMDYD 301
>gi|47228451|emb|CAG05271.1| unnamed protein product [Tetraodon nigroviridis]
Length = 579
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 36/58 (62%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L CF+R+ KLYC+ D+ R
Sbjct: 161 MVHCAGCERPILDRFLLNVLDRAWHAKCVQCCECSCNLTEKCFSRDGKLYCKMDFFRR 218
>gi|109098848|ref|XP_001111705.1| PREDICTED: LIM/homeobox protein Lhx5-like [Macaca mulatta]
gi|296213013|ref|XP_002753087.1| PREDICTED: LIM/homeobox protein Lhx5 [Callithrix jacchus]
gi|297693055|ref|XP_002823842.1| PREDICTED: LIM/homeobox protein Lhx5 [Pongo abelii]
gi|402887767|ref|XP_003907254.1| PREDICTED: LIM/homeobox protein Lhx5 [Papio anubis]
Length = 402
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRR 59
>gi|344295258|ref|XP_003419329.1| PREDICTED: LIM/homeobox protein Lhx5-like [Loxodonta africana]
Length = 402
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRR 59
>gi|156120769|ref|NP_001095531.1| LIM/homeobox protein Lhx5 [Bos taurus]
gi|151557071|gb|AAI50044.1| LHX5 protein [Bos taurus]
gi|296478515|tpg|DAA20630.1| TPA: LIM homeobox protein 5 [Bos taurus]
Length = 402
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRR 59
>gi|11641283|ref|NP_071758.1| LIM/homeobox protein Lhx5 [Homo sapiens]
gi|332840493|ref|XP_001153819.2| PREDICTED: LIM/homeobox protein Lhx5 [Pan troglodytes]
gi|397525022|ref|XP_003832477.1| PREDICTED: LIM/homeobox protein Lhx5 [Pan paniscus]
gi|426374256|ref|XP_004053995.1| PREDICTED: LIM/homeobox protein Lhx5 [Gorilla gorilla gorilla]
gi|18202938|sp|Q9H2C1.1|LHX5_HUMAN RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox
protein 5
gi|11527289|gb|AAG36963.1|AF291181_1 LHX5 protein [Homo sapiens]
gi|80475867|gb|AAI09231.1| LIM homeobox 5 [Homo sapiens]
gi|119618466|gb|EAW98060.1| LIM homeobox 5 [Homo sapiens]
gi|261861188|dbj|BAI47116.1| LIM homeobox 5 [synthetic construct]
Length = 402
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRR 59
>gi|405975209|gb|EKC39790.1| LIM/homeobox protein Lhx5 [Crassostrea gigas]
Length = 471
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M +C +C RPI DR+LL V D ++H CV C +C +L CF+R+ KL+CR+D+ R
Sbjct: 1 MVQCAACDRPILDRFLLNVLDRAWHAKCVQCSDCKTTLTDKCFSRDGKLFCRNDFFRR 58
>gi|114626799|ref|XP_001141606.1| PREDICTED: LIM homeobox transcription factor 1-beta [Pan
troglodytes]
Length = 623
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 272 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 328
>gi|158287501|ref|XP_309513.3| AGAP011134-PA [Anopheles gambiae str. PEST]
gi|157019681|gb|EAA05265.3| AGAP011134-PA [Anopheles gambiae str. PEST]
Length = 501
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C +PI D++LL V + +H CV C EC LA CF+RE+KLYCR+D+ R
Sbjct: 27 CAGCNKPILDKFLLNVLERGWHATCVRCCECHQPLADKCFSRESKLYCRNDFFRR 81
>gi|440898273|gb|ELR49802.1| LIM/homeobox protein Lhx5, partial [Bos grunniens mutus]
Length = 376
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRR 59
>gi|390458375|ref|XP_002743346.2| PREDICTED: LIM homeobox transcription factor 1-beta [Callithrix
jacchus]
Length = 638
Score = 70.9 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 287 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 343
>gi|126307650|ref|XP_001371228.1| PREDICTED: LIM/homeobox protein Lhx1-like [Monodelphis domestica]
Length = 412
Score = 70.9 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|338727662|ref|XP_001915147.2| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5-like
[Equus caballus]
Length = 403
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKANLSEKCFSREGKLYCKNDFFRR 59
>gi|321473071|gb|EFX84039.1| hypothetical protein DAPPUDRAFT_24627 [Daphnia pulex]
Length = 225
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 37/53 (69%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C CG I DRY++RVAD S+HE+C+ C C L HSCFTR ++YCR DYD
Sbjct: 2 CEGCGLGIADRYVMRVADGSWHEDCLVCCICHAPLVHSCFTRSGRVYCRQDYD 54
>gi|403281850|ref|XP_003932386.1| PREDICTED: LIM/homeobox protein Lhx5 [Saimiri boliviensis
boliviensis]
Length = 385
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRR 59
>gi|426247330|ref|XP_004017439.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5 [Ovis
aries]
Length = 386
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRR 59
>gi|410921390|ref|XP_003974166.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Takifugu rubripes]
Length = 354
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 35/58 (60%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LLRV D +HE CV C CG +L SCF R KLYC+ DY
Sbjct: 1 MDQRAVCAGCQRPIRDRFLLRVTDCLWHEACVRCAACGDALKKSCFVRGRKLYCKQDY 58
>gi|328779726|ref|XP_001120677.2| PREDICTED: LIM homeobox transcription factor 1-beta-like [Apis
mellifera]
Length = 402
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C CGR I D+Y+++VA +YHE C++C C L HSCF RE KLYCR+DY+
Sbjct: 58 CAGCGRTIVDKYVMQVAGRNYHEECLSCAACATPLIHSCFIRELKLYCRTDYE 110
>gi|45382269|ref|NP_990744.1| LIM/homeobox protein Lhx1 [Gallus gallus]
gi|1708826|sp|P53411.1|LHX1_CHICK RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1
gi|531183|gb|AAA62173.1| amino acid feature: homeodomain, bp 674 .. 853; amino acid
feature: LIM2, bp 326 .. 481; amino acid feature: LIM1,
bp 149 ..292 [Gallus gallus]
Length = 406
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|380030211|ref|XP_003698747.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-beta-like [Apis florea]
Length = 402
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C CGR I D+Y+++VA +YHE C++C C L HSCF RE KLYCR+DY+
Sbjct: 58 CAGCGRTIVDKYVMQVAGRNYHEECLSCAACATPLIHSCFIRELKLYCRTDYE 110
>gi|426238599|ref|XP_004013238.1| PREDICTED: LIM/homeobox protein Lhx1 [Ovis aries]
Length = 388
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 37/58 (63%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+ R
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRR 58
>gi|148225925|ref|NP_001084128.1| LIM/homeobox protein Lhx1 [Xenopus laevis]
gi|267419|sp|P29674.1|LHX1_XENLA RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1;
Short=Xlim1; Short=x-Lhx1; Short=xLIM-1
gi|64830|emb|CAA45353.1| homeobox protein [Xenopus laevis]
gi|213623130|gb|AAI69338.1| Homeobox protein [Xenopus laevis]
gi|213623134|gb|AAI69340.1| Homeobox protein [Xenopus laevis]
Length = 403
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 37/58 (63%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+ R
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRR 58
>gi|154147696|ref|NP_001093698.1| LIM homeobox 1 [Xenopus (Silurana) tropicalis]
gi|138519843|gb|AAI35732.1| lhx1 protein [Xenopus (Silurana) tropicalis]
Length = 409
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 37/58 (63%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+ R
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRR 58
>gi|195126142|ref|XP_002007533.1| GI12337 [Drosophila mojavensis]
gi|193919142|gb|EDW18009.1| GI12337 [Drosophila mojavensis]
Length = 586
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
P + +C C +PI DRY++RV D S+HE C+ C C L HSC+ R+ KLYCR DY+
Sbjct: 225 PGLNQCTYCCQPICDRYIMRVVDNSFHEGCLKCSACSLHLVHSCYARDGKLYCRIDYE 282
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 7 CGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYD 59
C CG I D ++R + +H C ACV CG L ++ +L+CR DY+
Sbjct: 290 CLGCGHKIAADELVMRSQENIFHLKCFACVVCGAVLKKGEQYVVKQGQLFCRFDYE 345
>gi|345326124|ref|XP_001508297.2| PREDICTED: hypothetical protein LOC100077000 [Ornithorhynchus
anatinus]
Length = 553
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C RPI+DR+LLRV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 209 CEGCQRPISDRFLLRVNEASWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 260
>gi|195376251|ref|XP_002046910.1| GJ12228 [Drosophila virilis]
gi|194154068|gb|EDW69252.1| GJ12228 [Drosophila virilis]
Length = 564
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
P + +C C +PI DRY++RV D S+HE C+ C C L HSC+ R+ KLYCR DY+
Sbjct: 209 PALNQCTFCCQPICDRYIMRVVDNSFHEGCLKCTACSLHLVHSCYARDGKLYCRIDYE 266
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 7 CGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYD 59
C CG I D ++R + +H C ACV CG L ++ +L+CR DY+
Sbjct: 274 CLGCGHKIAADELVMRSQENIFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFDYE 329
>gi|301776020|ref|XP_002923422.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1-like
[Ailuropoda melanoleuca]
Length = 405
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|444723048|gb|ELW63713.1| LIM/homeobox protein Lhx5 [Tupaia chinensis]
Length = 610
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRR 59
>gi|549846|gb|AAA21644.1| LIM domain transcription factor LIM-1 [Homo sapiens]
Length = 404
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|344285733|ref|XP_003414614.1| PREDICTED: LIM/homeobox protein Lhx1-like [Loxodonta africana]
Length = 406
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|291405647|ref|XP_002719296.1| PREDICTED: LIM homeobox protein 5 [Oryctolagus cuniculus]
Length = 406
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|157428018|ref|NP_001098917.1| LIM/homeobox protein Lhx1 [Bos taurus]
gi|358417202|ref|XP_003583582.1| PREDICTED: LIM/homeobox protein Lhx1-like [Bos taurus]
gi|157279406|gb|AAI53213.1| LHX1 protein [Bos taurus]
gi|296477035|tpg|DAA19150.1| TPA: LIM homeobox protein 1 [Bos taurus]
gi|440905066|gb|ELR55504.1| LIM/homeobox protein Lhx1 [Bos grunniens mutus]
Length = 406
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|76573889|ref|NP_001029088.1| LIM/homeobox protein Lhx1 [Pan troglodytes]
gi|297700651|ref|XP_002827352.1| PREDICTED: LIM/homeobox protein Lhx1 [Pongo abelii]
gi|311267821|ref|XP_003131754.1| PREDICTED: LIM/homeobox protein Lhx1-like [Sus scrofa]
gi|348567695|ref|XP_003469634.1| PREDICTED: LIM/homeobox protein Lhx1-like [Cavia porcellus]
gi|359320451|ref|XP_003639347.1| PREDICTED: LIM/homeobox protein Lhx1-like [Canis lupus
familiaris]
gi|397494263|ref|XP_003818003.1| PREDICTED: LIM/homeobox protein Lhx1 [Pan paniscus]
gi|402899902|ref|XP_003912923.1| PREDICTED: LIM/homeobox protein Lhx1 [Papio anubis]
gi|403274736|ref|XP_003929119.1| PREDICTED: LIM/homeobox protein Lhx1 [Saimiri boliviensis
boliviensis]
gi|410980542|ref|XP_003996636.1| PREDICTED: LIM/homeobox protein Lhx1 [Felis catus]
gi|426348609|ref|XP_004041924.1| PREDICTED: LIM/homeobox protein Lhx1 [Gorilla gorilla gorilla]
gi|60389888|sp|Q5IS44.1|LHX1_PANTR RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1
gi|60389889|sp|Q5IS89.1|LHX1_SAIBB RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1
gi|56122252|gb|AAV74277.1| LIM homeobox protein 1 [Saimiri boliviensis]
gi|56122342|gb|AAV74322.1| LIM homeobox protein 1 [Pan troglodytes]
gi|355568607|gb|EHH24888.1| LIM/homeobox protein Lhx1 [Macaca mulatta]
gi|444720995|gb|ELW61755.1| LIM/homeobox protein Lhx1 [Tupaia chinensis]
Length = 406
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|6678688|ref|NP_032524.1| LIM/homeobox protein Lhx1 [Mus musculus]
gi|94400804|ref|NP_665887.3| LIM/homeobox protein Lhx1 [Rattus norvegicus]
gi|354477124|ref|XP_003500772.1| PREDICTED: LIM/homeobox protein Lhx1-like [Cricetulus griseus]
gi|51702761|sp|P63007.1|LHX1_RAT RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1;
Short=Rlim
gi|51702763|sp|P63006.1|LHX1_MOUSE RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1
gi|51702764|sp|P63008.1|LHX1_MESAU RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein LMX-2;
AltName: Full=Homeobox protein Lim-1
gi|2144068|pir||I58187 homeotic protein lim-1 - rat
gi|425217|emb|CAA81797.1| lim1 [Mus musculus]
gi|559636|gb|AAC60696.1| transcription factor [Rattus sp.]
gi|587463|emb|CAA57164.1| lmx2 [Mesocricetus auratus]
gi|4104801|gb|AAD02169.1| homeobox protein Lim1 [Mus musculus]
gi|62201098|gb|AAH92374.1| Lhx1 protein [Mus musculus]
gi|148683791|gb|EDL15738.1| LIM homeobox protein 1 [Mus musculus]
gi|149053699|gb|EDM05516.1| LIM homeobox protein 1 [Rattus norvegicus]
Length = 406
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|350402518|ref|XP_003486514.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Bombus
impatiens]
Length = 402
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C CGR I D+Y+++V+ +YHE C++C C L HSCF RE KLYCR+DY+
Sbjct: 58 CAGCGRTIVDKYVMQVSGRNYHEECLSCAACATPLTHSCFIRELKLYCRNDYE 110
>gi|431890885|gb|ELK01764.1| LIM/homeobox protein Lhx1 [Pteropus alecto]
Length = 406
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|395531962|ref|XP_003768042.1| PREDICTED: LIM/homeobox protein Lhx1 [Sarcophilus harrisii]
Length = 406
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|88954018|gb|ABD59002.1| LIM-homeodomain protein AmphiLim1/5 [Branchiostoma floridae]
Length = 464
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 35/55 (63%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C RP+ DR+LL V D ++H CV C +C L CFTR++KLYCR D+ R
Sbjct: 5 CAGCERPVLDRFLLNVLDRAWHAKCVRCSDCSCRLTEKCFTRDSKLYCREDFFRR 59
>gi|30410785|ref|NP_005559.2| LIM/homeobox protein Lhx1 [Homo sapiens]
gi|60416412|sp|P48742.2|LHX1_HUMAN RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1;
Short=hLim-1
gi|75517203|gb|AAI01675.1| LIM homeobox 1 [Homo sapiens]
gi|85565997|gb|AAI11937.1| LIM homeobox 1 [Homo sapiens]
gi|119577978|gb|EAW57574.1| LIM homeobox 1 [Homo sapiens]
gi|167773161|gb|ABZ92015.1| LIM homeobox 1 [synthetic construct]
gi|208966670|dbj|BAG73349.1| LIM homeobox 1 [synthetic construct]
Length = 406
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|410979118|ref|XP_003995933.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 4
[Felis catus]
Length = 382
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 28 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 84
>gi|296201935|ref|XP_002748333.1| PREDICTED: LIM/homeobox protein Lhx1 [Callithrix jacchus]
Length = 406
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|332258740|ref|XP_003278453.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1
[Nomascus leucogenys]
Length = 374
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|395845905|ref|XP_003795658.1| PREDICTED: LIM/homeobox protein Lhx1 [Otolemur garnettii]
Length = 407
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|194747131|ref|XP_001956006.1| GF24989 [Drosophila ananassae]
gi|190623288|gb|EDV38812.1| GF24989 [Drosophila ananassae]
Length = 554
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
+C C +PI DRY++RV + S+HE C+ C C L HSCF RE KLYCR DY+
Sbjct: 206 QCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCFAREGKLYCRIDYE 259
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 7 CGSCGRPI-TDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRKK 63
C CG I +D ++R + +H C ACV CG L ++ +L+CR DY+ K+
Sbjct: 267 CLGCGHKIASDELVMRCHENVFHLKCFACVVCGVLLKKGEQYVVKQGQLFCRFDYE--KE 324
Query: 64 GSQLVTVLFYS 74
L FY
Sbjct: 325 VEMLQGYDFYG 335
>gi|410903918|ref|XP_003965440.1| PREDICTED: LIM/homeobox protein Lhx5-like [Takifugu rubripes]
Length = 396
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 36/58 (62%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L CF+R+ KLYC+ D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHAKCVQCCECNCNLTEKCFSRDGKLYCKMDFFRR 59
>gi|195012862|ref|XP_001983762.1| GH16074 [Drosophila grimshawi]
gi|193897244|gb|EDV96110.1| GH16074 [Drosophila grimshawi]
Length = 583
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C +PI DRY++RV D S+HE C+ C C L HSC+ R+ KLYCR DY+
Sbjct: 236 CAYCCQPICDRYIMRVVDSSFHEGCLKCTACAQHLVHSCYARDGKLYCRLDYE 288
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 7 CGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRKK 63
C CG I D ++R + +H C ACV CG L ++ +L+CR DY+ K+
Sbjct: 296 CLGCGHKIAGDELVMRSQENIFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFDYE--KE 353
Query: 64 GSQLVTVLFYS 74
L FY
Sbjct: 354 VEMLQGYDFYG 364
>gi|351696664|gb|EHA99582.1| LIM/homeobox protein Lhx1 [Heterocephalus glaber]
Length = 406
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|432856535|ref|XP_004068463.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Oryzias latipes]
Length = 348
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 37/54 (68%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
C C R ITDR+LLRVAD +HE CV C CG +L +SCF E KLYC+ DY S
Sbjct: 16 CVGCQRRITDRFLLRVADGLWHERCVRCAACGDALRNSCFLLERKLYCKRDYSS 69
>gi|397473155|ref|XP_003808084.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-beta [Pan paniscus]
Length = 402
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 51 PHPAVCXGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 107
>gi|402897927|ref|XP_003911988.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-beta [Papio anubis]
Length = 406
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 51 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 107
>gi|351707222|gb|EHB10141.1| LIM homeobox transcription factor 1-beta [Heterocephalus glaber]
Length = 395
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 51 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 107
>gi|47480835|gb|AAH69588.1| LMX1B protein [Homo sapiens]
Length = 377
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 26 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 82
>gi|8247930|sp|O60663.2|LMX1B_HUMAN RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|3335524|gb|AAC27294.1| LIM homeodomain protein [Homo sapiens]
gi|119608047|gb|EAW87641.1| LIM homeobox transcription factor 1, beta, isoform CRA_a [Homo
sapiens]
Length = 379
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 28 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 84
>gi|410979116|ref|XP_003995932.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Felis catus]
Length = 406
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 51 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 107
>gi|301761900|ref|XP_002916368.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 3
[Ailuropoda melanoleuca]
Length = 406
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 51 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 107
>gi|297685372|ref|XP_002820264.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Pongo abelii]
Length = 383
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 28 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 84
>gi|293345851|ref|XP_001078699.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Rattus norvegicus]
gi|293357761|ref|XP_001069713.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Rattus norvegicus]
Length = 395
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 51 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 107
>gi|219520075|gb|AAI43802.1| LMX1B protein [Homo sapiens]
Length = 383
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 28 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 84
>gi|292494915|ref|NP_001167618.1| LIM homeobox transcription factor 1-beta isoform 2 [Homo sapiens]
gi|301761896|ref|XP_002916366.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 1
[Ailuropoda melanoleuca]
gi|344271902|ref|XP_003407776.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Loxodonta africana]
gi|410979112|ref|XP_003995930.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Felis catus]
gi|281340079|gb|EFB15663.1| hypothetical protein PANDA_004429 [Ailuropoda melanoleuca]
Length = 402
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 51 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 107
>gi|345805844|ref|XP_003435360.1| PREDICTED: LIM homeobox transcription factor 1-beta [Canis lupus
familiaris]
Length = 487
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 136 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 192
>gi|297271296|ref|XP_002800229.1| PREDICTED: LIM homeobox transcription factor 1-beta [Macaca
mulatta]
Length = 385
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 28 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 84
>gi|410915338|ref|XP_003971144.1| PREDICTED: LIM/homeobox protein Lhx1-like [Takifugu rubripes]
Length = 397
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M +C SC +PI DR+LL+V D +H CV C +C +L+ CF+RE KLYC++D+ R
Sbjct: 1 MLQCTSCEKPILDRFLLKVLDRPWHVKCVQCCDCKCTLSEKCFSREGKLYCKNDFFRR 58
>gi|417410392|gb|JAA51670.1| Putative lim homeobox transcription factor 1-beta, partial
[Desmodus rotundus]
Length = 398
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 47 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 103
>gi|292494913|ref|NP_001167617.1| LIM homeobox transcription factor 1-beta isoform 3 [Homo sapiens]
Length = 406
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 51 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 107
>gi|292494911|ref|NP_002307.2| LIM homeobox transcription factor 1-beta isoform 1 [Homo sapiens]
gi|301761898|ref|XP_002916367.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 2
[Ailuropoda melanoleuca]
gi|344271898|ref|XP_003407774.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Loxodonta africana]
gi|306921455|dbj|BAJ17807.1| LIM homeobox transcription factor 1, beta [synthetic construct]
gi|387541732|gb|AFJ71493.1| LIM homeobox transcription factor 1-beta isoform 1 [Macaca mulatta]
Length = 395
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 51 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 107
>gi|417410318|gb|JAA51634.1| Putative lim homeobox transcription factor 1-beta, partial
[Desmodus rotundus]
Length = 391
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 47 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 103
>gi|195400977|ref|XP_002059092.1| GJ15180 [Drosophila virilis]
gi|194141744|gb|EDW58161.1| GJ15180 [Drosophila virilis]
Length = 498
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C +PI D++LL V + ++H +CV C EC L CF+RE+KLYCR+D+ R
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRR 81
>gi|195130757|ref|XP_002009817.1| GI15570 [Drosophila mojavensis]
gi|193908267|gb|EDW07134.1| GI15570 [Drosophila mojavensis]
Length = 503
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C +PI D++LL V + ++H +CV C EC L CF+RE+KLYCR+D+ R
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRR 81
>gi|348535371|ref|XP_003455174.1| PREDICTED: LIM/homeobox protein Lhx5-like [Oreochromis niloticus]
Length = 396
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 36/58 (62%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L CF+R+ KLYC+ D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHAKCVQCCECNCNLTEKCFSRDGKLYCKIDFFRR 59
>gi|195049216|ref|XP_001992673.1| GH24084 [Drosophila grimshawi]
gi|193893514|gb|EDV92380.1| GH24084 [Drosophila grimshawi]
Length = 501
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C +PI D++LL V + ++H +CV C EC L CF+RE+KLYCR+D+ R
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRR 81
>gi|195480019|ref|XP_002101106.1| GE17432 [Drosophila yakuba]
gi|194188630|gb|EDX02214.1| GE17432 [Drosophila yakuba]
Length = 500
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C +PI D++LL V + ++H +CV C EC L CF+RE+KLYCR+D+ R
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRR 81
>gi|194890894|ref|XP_001977402.1| GG19023 [Drosophila erecta]
gi|190649051|gb|EDV46329.1| GG19023 [Drosophila erecta]
Length = 504
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C +PI D++LL V + ++H +CV C EC L CF+RE+KLYCR+D+ R
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRR 81
>gi|18858205|ref|NP_572505.1| Lim1, isoform A [Drosophila melanogaster]
gi|39841014|gb|AAD55417.2|AF181631_1 GH04929p [Drosophila melanogaster]
gi|6252420|dbj|BAA86224.1| dLim1 [Drosophila melanogaster]
gi|22833027|gb|AAF46413.2| Lim1, isoform A [Drosophila melanogaster]
gi|220943666|gb|ACL84376.1| Lim1-PA [synthetic construct]
gi|220953602|gb|ACL89344.1| Lim1-PA [synthetic construct]
Length = 505
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C +PI D++LL V + ++H +CV C EC L CF+RE+KLYCR+D+ R
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRR 81
>gi|195456664|ref|XP_002075233.1| GK16904 [Drosophila willistoni]
gi|194171318|gb|EDW86219.1| GK16904 [Drosophila willistoni]
Length = 506
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C +PI D++LL V + ++H +CV C EC L CF+RE+KLYCR+D+ R
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRR 81
>gi|270009219|gb|EFA05667.1| lim1 [Tribolium castaneum]
Length = 511
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C +C +PI D++LL V + ++H +CV C +C L CF+RENKL+CR+D+ R
Sbjct: 78 CAACDKPILDKFLLNVLERTWHADCVRCFDCHAPLTDKCFSRENKLFCRNDFFRR 132
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDY 58
+CG CG+ I+ L+R A D +H NC C+ C L+ +NK C+ DY
Sbjct: 136 KCGGCGQGISPSDLVRKARDKVFHLNCFTCLVCRKQLSTGEELYVLDDNKFICKDDY 192
>gi|194769270|ref|XP_001966729.1| GF19125 [Drosophila ananassae]
gi|190618250|gb|EDV33774.1| GF19125 [Drosophila ananassae]
Length = 500
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C +PI D++LL V + ++H +CV C EC L CF+RE+KLYCR+D+ R
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRR 81
>gi|426223032|ref|XP_004005683.1| PREDICTED: LIM homeobox transcription factor 1-beta [Ovis aries]
Length = 405
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 51 PPPAGCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 107
>gi|344271900|ref|XP_003407775.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Loxodonta africana]
Length = 406
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 51 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 107
>gi|449479889|ref|XP_004177057.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1
[Taeniopygia guttata]
Length = 419
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|348516128|ref|XP_003445591.1| PREDICTED: LIM homeobox transcription factor 1-beta.1-like
[Oreochromis niloticus]
Length = 399
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C RPI+DR+L+RV D S+HE C+ C C L +SC+ RE KLYC+ DY
Sbjct: 56 CEGCQRPISDRFLMRVNDSSWHEECLQCTVCQQPLTNSCYFRERKLYCKHDY 107
>gi|189238568|ref|XP_969484.2| PREDICTED: similar to LIM homeobox 1b [Tribolium castaneum]
Length = 497
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C +C +PI D++LL V + ++H +CV C +C L CF+RENKL+CR+D+ R
Sbjct: 154 CAACDKPILDKFLLNVLERTWHADCVRCFDCHAPLTDKCFSRENKLFCRNDFFRR 208
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDY 58
+CG CG+ I+ L+R A D +H NC C+ C L+ +NK C+ DY
Sbjct: 212 KCGGCGQGISPSDLVRKARDKVFHLNCFTCLVCRKQLSTGEELYVLDDNKFICKDDY 268
>gi|385862228|ref|NP_001245353.1| LIM homeobox transcription factor 1-beta [Sus scrofa]
Length = 379
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 28 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 84
>gi|391342697|ref|XP_003745652.1| PREDICTED: LIM/homeobox protein Lhx1-like [Metaseiulus
occidentalis]
Length = 363
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 39/58 (67%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M +C C RPI DR+LL V D S+H CV C +C SL+ CF+R+ KL+CRSD+ R
Sbjct: 3 MVQCAGCERPILDRFLLHVLDRSWHAKCVQCSDCRCSLSEKCFSRDGKLFCRSDFYKR 60
>gi|55846812|gb|AAV67410.1| LIM homeobox protein 1 [Macaca fascicularis]
Length = 403
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 35/52 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 52
>gi|332230039|ref|XP_003264194.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Nomascus leucogenys]
Length = 408
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 107
>gi|198469300|ref|XP_001354984.2| GA10943 [Drosophila pseudoobscura pseudoobscura]
gi|198146805|gb|EAL32040.2| GA10943 [Drosophila pseudoobscura pseudoobscura]
Length = 528
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C +PI D++LL V + ++H +CV C EC L CF+RE+KLYCR+D+ R
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRR 81
>gi|395505736|ref|XP_003757195.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Sarcophilus harrisii]
Length = 404
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 51 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 107
>gi|332230041|ref|XP_003264195.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Nomascus leucogenys]
Length = 401
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 107
>gi|195354923|ref|XP_002043945.1| GM13699 [Drosophila sechellia]
gi|194129190|gb|EDW51233.1| GM13699 [Drosophila sechellia]
Length = 424
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C +PI D++LL V + ++H +CV C EC L CF+RE+KLYCR+D+ R
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRR 81
>gi|449282069|gb|EMC88978.1| LIM/homeobox protein Lhx1 [Columba livia]
Length = 400
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|383861320|ref|XP_003706134.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Megachile
rotundata]
Length = 402
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C CGR I+D+Y+++VA +YHE C++C C L SCF RE K YCR+DY+
Sbjct: 58 CAGCGRTISDKYVMQVAGRNYHEECLSCAACAAPLTQSCFIRELKFYCRTDYE 110
>gi|332230043|ref|XP_003264196.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Nomascus leucogenys]
Length = 416
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 107
>gi|295656539|gb|ADG26732.1| Lhx1/5 [Platynereis dumerilii]
Length = 291
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 34/55 (61%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C RPI DR+LL V D ++H CV C EC L CF+RE KLYCR D+ R
Sbjct: 4 CAGCDRPILDRFLLNVLDRAWHAQCVQCTECKAHLTDKCFSREGKLYCRDDFFRR 58
>gi|440898169|gb|ELR49722.1| LIM homeobox transcription factor 1-beta [Bos grunniens mutus]
Length = 392
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 8 GSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
G C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 47 GECERPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 97
>gi|348505058|ref|XP_003440078.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Oreochromis niloticus]
Length = 361
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 36/52 (69%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C R I DR+LLRV D +HE+CV C CG +L +SCF R+ KLYC+ DY
Sbjct: 17 CAGCHRLIRDRFLLRVTDGLWHEDCVRCAACGDALTNSCFLRDRKLYCKRDY 68
>gi|74187870|dbj|BAE24561.1| unnamed protein product [Mus musculus]
Length = 406
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 35/55 (63%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRLLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|432874756|ref|XP_004072577.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Oryzias
latipes]
Length = 398
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C RPI+DR+L+RV D S+HE C+ C C L SC+ RE KLYC+ DY
Sbjct: 56 CEGCQRPISDRFLMRVNDSSWHEECLQCAVCQQPLTTSCYLRERKLYCKHDY 107
>gi|348569787|ref|XP_003470679.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Cavia
porcellus]
Length = 402
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 51 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 107
>gi|328715997|ref|XP_001946565.2| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Acyrthosiphon pisum]
Length = 407
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 35/53 (66%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C CG I DR+L+RV S+HE CV C CG LA SC+ R N LYC++DYD
Sbjct: 33 CEGCGTKIVDRFLMRVGTSSWHEQCVTCSACGVPLAKSCYYRHNGLYCKNDYD 85
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 6 ECGSCGRPITDRYLLRVADIS--YHENCVACVECGHSLAHS----CFTRENKLYCRSDYD 59
+CG CG P+ R L+ A S YH C ACV C L +L+CR+D++
Sbjct: 91 KCGRCGEPLGARELVMRAGPSHVYHVGCFACVACMQPLQKGQQYVVKAGGGQLFCRTDFE 150
>gi|242011465|ref|XP_002426470.1| LIM/homeobox protein Lhx3, putative [Pediculus humanus corporis]
gi|212510582|gb|EEB13732.1| LIM/homeobox protein Lhx3, putative [Pediculus humanus corporis]
Length = 394
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C +PI D++LL V D ++H CV C +C +LA CF+RE KL+CR+D+ R
Sbjct: 33 CAGCDKPILDKFLLNVLDRTWHAECVRCHDCRAALADKCFSREGKLFCRNDFFRR 87
>gi|410922082|ref|XP_003974512.1| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Takifugu rubripes]
Length = 375
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C RPI+DR+L+RV D S+HE C+ C C L SC+ RE KLYC+ DY
Sbjct: 33 CEGCQRPISDRFLMRVNDSSWHEECLQCTVCQQPLTTSCYFRERKLYCKHDY 84
>gi|1145814|gb|AAA84995.1| LIM homeodomain protein [Gallus gallus]
Length = 377
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 28 PHQAVCEGCQRPISDRFLMRVNESSWHEECLQCAVCQQALTTSCYFRDRKLYCKQDY 84
>gi|443701941|gb|ELU00131.1| hypothetical protein CAPTEDRAFT_168913 [Capitella teleta]
Length = 481
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C RPI +R+LL V D ++H CV CV+C L CF+R+ +LYCR D+ R
Sbjct: 6 CAGCDRPIIERFLLTVLDRAWHAQCVLCVDCQAPLTDKCFSRDGRLYCRQDFYRR 60
>gi|45382493|ref|NP_990689.1| LIM/homeobox protein LMX-1.2 [Gallus gallus]
gi|1708855|sp|P53413.1|LMX1B_CHICK RecName: Full=LIM/homeobox protein LMX-1.2; Short=Homeobox
protein LMX-1; Short=LIM/homeobox protein 1; Short=LMX
gi|1050198|gb|AAA96240.1| LIM1 domain bp 172-315, LIM2 domain bp 349-501, homeobox domain
bp 655-831 [Gallus gallus]
Length = 377
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 28 PHQAVCEGCQRPISDRFLMRVNESSWHEECLQCAVCQQALTTSCYFRDRKLYCKQDY 84
>gi|332250744|ref|XP_003274511.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5
[Nomascus leucogenys]
Length = 323
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDF 56
>gi|395505734|ref|XP_003757194.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Sarcophilus harrisii]
Length = 394
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 51 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 107
>gi|255759880|ref|NP_034855.2| LIM homeobox transcription factor 1-beta [Mus musculus]
gi|109112190|ref|XP_001097412.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Macaca mulatta]
gi|297685370|ref|XP_002820263.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Pongo abelii]
gi|395824199|ref|XP_003785358.1| PREDICTED: LIM homeobox transcription factor 1-beta [Otolemur
garnettii]
gi|403299811|ref|XP_003940668.1| PREDICTED: LIM homeobox transcription factor 1-beta [Saimiri
boliviensis boliviensis]
gi|410979114|ref|XP_003995931.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Felis catus]
gi|341940912|sp|O88609.2|LMX1B_MOUSE RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|3132909|gb|AAC39738.1| LIM homeodomain protein LMX1B [Homo sapiens]
gi|47479658|gb|AAH69601.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|85567565|gb|AAI12121.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|109731283|gb|AAI13492.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|111600533|gb|AAI19170.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|116138517|gb|AAI25470.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|119608048|gb|EAW87642.1| LIM homeobox transcription factor 1, beta, isoform CRA_b [Homo
sapiens]
gi|148676655|gb|EDL08602.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|312150934|gb|ADQ31979.1| LIM homeobox transcription factor 1, beta [synthetic construct]
gi|313882992|gb|ADR82982.1| LIM homeobox transcription factor 1, beta (LMX1B) [synthetic
construct]
Length = 372
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 28 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 84
>gi|334311509|ref|XP_001366137.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Monodelphis domestica]
Length = 394
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 51 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 107
>gi|149038965|gb|EDL93185.1| LIM homeobox transcription factor 1 beta [Rattus norvegicus]
Length = 372
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 28 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 84
>gi|3348118|gb|AAC27793.1| LIM homeodomain protein [Mus musculus]
Length = 372
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 28 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 84
>gi|355564712|gb|EHH21212.1| hypothetical protein EGK_04224, partial [Macaca mulatta]
Length = 293
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDF 56
>gi|156543668|ref|XP_001605174.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Nasonia
vitripennis]
Length = 419
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C +CGR I D+Y++RV + +YHE C++C EC L+H C+ R+ K YCR+DY
Sbjct: 59 CANCGRGIADKYVMRVNERNYHETCLSCCECSAPLSHVCYARDCKFYCRADY 110
>gi|410976694|ref|XP_003994749.1| PREDICTED: LIM/homeobox protein Lhx5 [Felis catus]
Length = 332
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRR 59
>gi|334311511|ref|XP_003339631.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Monodelphis domestica]
Length = 401
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 51 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 107
>gi|395505738|ref|XP_003757196.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Sarcophilus harrisii]
Length = 401
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 51 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 107
>gi|10257388|dbj|BAB13725.1| transcription factor HpLim1 [Hemicentrotus pulcherrimus]
Length = 480
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 34/55 (61%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C RPI DR+LL V D +H CV C EC L CF+RE KL+C++D+ R
Sbjct: 5 CAGCERPILDRFLLNVLDRPWHVKCVQCCECKAKLTEKCFSREGKLFCKNDFFRR 59
>gi|2497672|sp|Q60564.1|LMX1B_MESAU RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|1432087|gb|AAB62320.1| LIM-homeodomain protein [Mesocricetus auratus]
Length = 369
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 18 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 74
>gi|355786560|gb|EHH66743.1| hypothetical protein EGM_03791, partial [Macaca fascicularis]
Length = 306
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDF 56
>gi|281343471|gb|EFB19055.1| hypothetical protein PANDA_014809 [Ailuropoda melanoleuca]
Length = 354
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L+ CF+RE KLYC++D+
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDF 56
>gi|348525932|ref|XP_003450475.1| PREDICTED: LIM/homeobox protein Lhx1-like [Oreochromis niloticus]
Length = 399
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M +C SC +PI DR+LL+V D +H CV C +C SL CF+RE KLYC++D+
Sbjct: 1 MLQCASCEKPILDRFLLKVLDRPWHIKCVQCCDCKCSLTEKCFSREGKLYCKNDF 55
>gi|47551255|ref|NP_999810.1| Lim homeodomain transcription factor 1 [Strongylocentrotus
purpuratus]
gi|33286229|gb|AAQ01662.1| Lim homeodomain transcription factor 1 [Strongylocentrotus
purpuratus]
Length = 480
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 34/55 (61%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C RPI DR+LL V D +H CV C EC L CF+RE KL+C++D+ R
Sbjct: 5 CAGCERPILDRFLLNVLDRPWHVKCVQCCECKAKLTEKCFSREGKLFCKNDFFRR 59
>gi|167859076|gb|ACA04473.1| Lim1 [Strongylocentrotus purpuratus]
Length = 480
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 34/55 (61%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C RPI DR+LL V D +H CV C EC L CF+RE KL+C++D+ R
Sbjct: 5 CAGCERPILDRFLLNVLDRPWHVKCVQCCECKAKLTEKCFSREGKLFCKNDFFRR 59
>gi|432885359|ref|XP_004074682.1| PREDICTED: LIM/homeobox protein Lhx5-like [Oryzias latipes]
Length = 396
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 36/58 (62%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C +C +L CF+R+ KLYC+ D+ R
Sbjct: 2 MVLCAGCERPILDRFLLNVLDRAWHAKCVQCCDCNCNLTEKCFSRDGKLYCKMDFFRR 59
>gi|383853574|ref|XP_003702297.1| PREDICTED: LIM/homeobox protein Lhx5-like [Megachile rotundata]
Length = 485
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C +PI D+YLL V D ++H CV C +C +L CF+RE KL+CR D+ R
Sbjct: 5 CAGCEKPIMDQYLLNVLDRAWHVECVRCFDCRTTLQDKCFSREAKLFCREDFFRR 59
>gi|340710825|ref|XP_003393984.1| PREDICTED: LIM/homeobox protein Lhx5-like [Bombus terrestris]
Length = 479
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C +PI D+YLL V D ++H CV C +C +L CF+RE KL+CR D+ R
Sbjct: 5 CAGCEKPIMDQYLLNVLDRAWHVECVRCFDCRTTLQDKCFSREAKLFCREDFFRR 59
>gi|147902022|ref|NP_001084038.1| LIM/homeobox protein Lhx5 [Xenopus laevis]
gi|1708831|sp|P37137.2|LHX5_XENLA RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox
protein 5; AltName: Full=Homeobox protein LIM-5;
Short=xLIM-5; AltName: Full=xLIM-2A
gi|840658|gb|AAA99464.1| LIM class homeodomain protein [Xenopus laevis]
gi|54311470|gb|AAH84744.1| Lim5/Lhx5 protein [Xenopus laevis]
Length = 402
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 2 MAHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKTDF 56
>gi|47197702|emb|CAF89234.1| unnamed protein product [Tetraodon nigroviridis]
Length = 57
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M +C SC +PI DR+LL+V D +H CV C EC +L+ CF+RE KLYC++D+
Sbjct: 1 MLQCASCEKPILDRFLLKVLDRPWHVKCVHCCECKCTLSEKCFSREGKLYCKNDF 55
>gi|156393340|ref|XP_001636286.1| predicted protein [Nematostella vectensis]
gi|156223388|gb|EDO44223.1| predicted protein [Nematostella vectensis]
Length = 184
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 38/53 (71%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C PI DR+L++V D ++HE+C+ C C L+ SCF+++ KLYCR+DY+
Sbjct: 1 CTGCNEPIEDRFLMKVVDEAWHESCLQCCICRSQLSRSCFSKDRKLYCRTDYE 53
>gi|344238818|gb|EGV94921.1| LIM/homeobox protein Lhx1 [Cricetulus griseus]
Length = 84
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|350396477|ref|XP_003484565.1| PREDICTED: LIM/homeobox protein Lhx5-like [Bombus impatiens]
Length = 419
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C +PI D+YLL V D ++H CV C +C +L CF+RE KL+CR D+ R
Sbjct: 5 CAGCEKPIMDQYLLNVLDRAWHVECVRCFDCRTTLQDKCFSREAKLFCREDFFRR 59
>gi|301609265|ref|XP_002934210.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Xenopus (Silurana) tropicalis]
Length = 380
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 34/53 (64%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I DR+LLR++D +HE C C C L SCF R+ KLYCR+DY+
Sbjct: 35 CEGCERVICDRFLLRISDSLWHEQCAQCCTCKEPLESSCFYRDKKLYCRNDYE 87
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+CG+C IT +++R YH C C C L ++ +L C+SDY+ +
Sbjct: 93 KCGTCLDTITPSEFVMRAQKNVYHLGCFCCCVCDRQLQKGDEFVLKDGQLLCKSDYERER 152
Query: 63 KGSQLVT 69
LV+
Sbjct: 153 DLLSLVS 159
>gi|357611533|gb|EHJ67530.1| lim homeobox protein [Danaus plexippus]
Length = 481
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
+ ++ +CG C I DRY+L+V+D ++H C+ CVEC L+ CF R N+LYC D+
Sbjct: 130 LSSIPKCGGCHEMIVDRYVLKVSDRTWHAGCLRCVECRAMLSGKCFARNNQLYCTEDFFK 189
Query: 61 R 61
R
Sbjct: 190 R 190
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 6 ECGSCGRPITDRYLLRVADIS-YHENCVACVECGHSLAHS---CFTRENKLYCRSDYD-S 60
+C CG+ I ++R A YH C AC C +L + KL C+ DY+ +
Sbjct: 194 KCAGCGQGIPPTQVVRRAQAHVYHLRCFACAACARTLNTGDEFYLMEDGKLVCKPDYEAA 253
Query: 61 RKKG 64
R KG
Sbjct: 254 RAKG 257
>gi|431898835|gb|ELK07205.1| LIM homeobox transcription factor 1-beta, partial [Pteropus
alecto]
Length = 291
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 5 PHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 61
>gi|241811701|ref|XP_002416451.1| lim homeobox protein, putative [Ixodes scapularis]
gi|215510915|gb|EEC20368.1| lim homeobox protein, putative [Ixodes scapularis]
Length = 100
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C CG PI DRY+LRV + S+HE+C+ C C L SC++R+ KL+C++DYD
Sbjct: 47 CAGCGLPIVDRYILRVMEHSWHESCLQCSVCHAPLEQSCYSRDKKLFCKADYD 99
>gi|340377757|ref|XP_003387395.1| PREDICTED: LIM/homeobox protein Lhx5-like [Amphimedon
queenslandica]
Length = 272
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSRKKGSQ 66
C C PI +R+L++V D S+H CV C +C L+ CF+R+NKLYCRSD+ R+ G+Q
Sbjct: 6 CAGCSEPIMERFLMKVLDKSWHVQCVKCSDCQCLLSEKCFSRDNKLYCRSDF-FRQYGTQ 64
Query: 67 LVT 69
+
Sbjct: 65 CAS 67
>gi|345497659|ref|XP_001601152.2| PREDICTED: LIM/homeobox protein Lhx5-like [Nasonia vitripennis]
Length = 475
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C +PI D++L V D ++H +CV C +C + L CF+RE KL+CR+D+ R
Sbjct: 5 CAGCDKPIMDKFLFNVLDRAWHADCVRCCDCRNPLQEKCFSREAKLFCRNDFFKR 59
>gi|195440768|ref|XP_002068212.1| GK12807 [Drosophila willistoni]
gi|194164297|gb|EDW79198.1| GK12807 [Drosophila willistoni]
Length = 554
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
+ +C C +PI DRY++RV D S+HE+C+ C C L HSC+ ++ KL+CR DY+
Sbjct: 205 LNQCSYCCQPICDRYIMRVVDNSFHESCLKCTACSLHLVHSCYAKDGKLFCRIDYE 260
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 7 CGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRKK 63
C CG I D ++R + +H C ACV CG L ++ +L+CR DY+ K+
Sbjct: 268 CLGCGHKIAHDELVMRCHENVFHLKCFACVVCGSLLKKGEQYVVKQGQLFCRFDYE--KE 325
Query: 64 GSQLVTVLFYS 74
L FYS
Sbjct: 326 VEMLQGYDFYS 336
>gi|62020648|gb|AAH20470.1| LHX1 protein, partial [Homo sapiens]
Length = 260
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|432113616|gb|ELK35898.1| LIM/homeobox protein Lhx1 [Myotis davidii]
Length = 272
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|28195590|gb|AAO23658.1| LMX1 [Gallus gallus]
Length = 85
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P+ C C RPI+DR+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 28 PHQAVCEGCQRPISDRFLMRVNESSWHEECLQCAVCQQALTTSCYFRDRKLYCKQDY 84
>gi|242000638|ref|XP_002434962.1| homeobox protein Lim-1, putative [Ixodes scapularis]
gi|215498292|gb|EEC07786.1| homeobox protein Lim-1, putative [Ixodes scapularis]
Length = 59
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M +C C RPI DR+LL V D S+H CV C +C +L CF+R+ KL+CR+D+
Sbjct: 3 MVQCAGCDRPILDRFLLNVLDRSWHAKCVQCCDCRCNLTEKCFSRDGKLFCRNDF 57
>gi|443701940|gb|ELU00130.1| hypothetical protein CAPTEDRAFT_97456 [Capitella teleta]
Length = 269
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C CG I+DR+ + V D ++H +CV C +CG L SC+TRE KLYC+SD+ R
Sbjct: 5 CIGCGSEISDRFFMTVLDQAWHTHCVQCADCGEKLIDSCYTREKKLYCKSDFFKR 59
>gi|334327218|ref|XP_001378455.2| PREDICTED: LIM/homeobox protein Lhx5-like [Monodelphis domestica]
Length = 303
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 37/58 (63%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDFFRR 59
>gi|2384698|gb|AAB70190.1| homeobox protein Lim-1 [Xenopus laevis]
Length = 112
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 37/58 (63%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+ R
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRR 58
>gi|390345308|ref|XP_790548.3| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Strongylocentrotus purpuratus]
Length = 387
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
P+ + C C R I DRYL++V D +HE C+ C C L+HSCF R+ KLYC+ DY+
Sbjct: 28 PSKEMCAGCQRAIDDRYLMKVMDHCWHEQCLQCSVCRIRLSHSCFARDRKLYCKLDYE 85
>gi|309243111|ref|NP_001020338.2| LIM homeobox transcription factor 1, beta 1 [Danio rerio]
gi|48375211|gb|AAT42258.1| LIM homeodomain protein Lmx1b.1 [Danio rerio]
gi|190337176|gb|AAI62952.1| LIM homeobox transcription factor 1, beta 1 [Danio rerio]
gi|190338183|gb|AAI62932.1| LIM homeobox transcription factor 1, beta 1 [Danio rerio]
Length = 375
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C RPI+DR+L+RV + S+HE C+ C C L SC+ RE KLYC+ DY
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAVCQQPLTTSCYFRERKLYCKYDY 84
>gi|62461837|gb|AAX83055.1| LIM homeodomain protein [Danio rerio]
Length = 375
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C RPI+DR+L+RV + S+HE C+ C C L SC+ RE KLYC+ DY
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAVCQQPLTTSCYFRERKLYCKYDY 84
>gi|62859483|ref|NP_001016082.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|89269010|emb|CAJ81605.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|189441838|gb|AAI67665.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|213624072|gb|AAI70608.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|213624092|gb|AAI70634.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
Length = 402
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKTDF 56
>gi|405971990|gb|EKC36789.1| LIM homeobox transcription factor 1-beta [Crassostrea gigas]
Length = 319
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 1 MPNMKE--CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
MP++ E C CG PI D+YL ++ D +HENC+ C C SL+ +C+++ LYC+SDY
Sbjct: 7 MPSIHEETCAGCGYPIRDKYLFKINDNVWHENCLQCAICRLSLSGTCYSKNGHLYCKSDY 66
Query: 59 DSRKKG 64
D +G
Sbjct: 67 DKLFRG 72
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 7 CGSCGRPITDRYLLR-VADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYD 59
C CG I L+R V +YH C CVECGH L + + R+ +++CR D+D
Sbjct: 74 CSGCGFSINPHELVRRVYSNTYHLPCFRCVECGHVLQDGNEFYIRDGQIFCRYDHD 129
>gi|391346181|ref|XP_003747357.1| PREDICTED: LIM homeobox transcription factor 1-beta.1-like
[Metaseiulus occidentalis]
Length = 434
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C RPI DRY+++V + S+HE+C+ C C LA SC++RE +++C++DYD
Sbjct: 59 CAGCERPIVDRYIMKVRESSWHESCLICSVCHQHLATSCYSRERRIFCKNDYD 111
>gi|195998992|ref|XP_002109364.1| hypothetical protein TRIADDRAFT_20649 [Trichoplax adhaerens]
gi|190587488|gb|EDV27530.1| hypothetical protein TRIADDRAFT_20649 [Trichoplax adhaerens]
Length = 208
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 41/57 (71%)
Query: 5 KECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
++C C + I D++LL+VAD +HE+C+ C +C L+ SC+ +++KLYC+ DYD R
Sbjct: 10 QKCTGCNQLIQDKFLLKVADDLWHEDCLRCYKCTQPLSKSCYIKDHKLYCKEDYDKR 66
>gi|431916082|gb|ELK16336.1| LIM homeobox transcription factor 1-alpha [Pteropus alecto]
Length = 374
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 27 CEGCQRVISDRFLLRLNDSFWHEECVQCASCKEPLETTCFYRDKKLYCKCDYE 79
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+CG C I + +++R YH C C C L ++ +L CR DY+ +
Sbjct: 85 KCGGCFEAIAPNEFVMRAQKTVYHLGCFCCCVCERQLQKGDEFVLKDGQLLCRGDYEKER 144
Query: 63 KGSQLVT 69
+ LV+
Sbjct: 145 ELLSLVS 151
>gi|170051196|ref|XP_001861655.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872532|gb|EDS35915.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 284
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSRK--KG 64
C C +PI D++LL V + +H +CV C EC L+ CF+RE+KLYCR+D+ ++ G
Sbjct: 108 CAGCNKPILDKFLLNVLERGWHASCVRCCECHQPLSDKCFSRESKLYCRNDFFRKQLSTG 167
Query: 65 SQL 67
QL
Sbjct: 168 EQL 170
>gi|52354701|gb|AAH82847.1| Unknown (protein for MGC:81549) [Xenopus laevis]
Length = 402
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+R++KLYC++D+
Sbjct: 2 MAHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSRDSKLYCKTDF 56
>gi|48375213|gb|AAT42259.1| LIM homeodomain protein Lmx1b.2 [Danio rerio]
Length = 375
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C RPI+DR+LLR+ D S+HE C+ C C L SC++R++KLYC+ DY
Sbjct: 33 CEGCHRPISDRFLLRMNDSSWHEECLQCSVCQQLLTMSCYSRDHKLYCKHDY 84
>gi|327282632|ref|XP_003226046.1| PREDICTED: LIM/homeobox protein Lhx5-like [Anolis carolinensis]
Length = 400
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDF 56
>gi|363740116|ref|XP_001234553.2| PREDICTED: LIM/homeobox protein Lhx5 [Gallus gallus]
Length = 402
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDF 56
>gi|194390004|dbj|BAG60518.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|68448499|ref|NP_001020339.1| LIM homeobox transcription factor 1, beta a [Danio rerio]
gi|62461839|gb|AAX83056.1| LIM homeodomain protein [Danio rerio]
gi|190337362|gb|AAI63321.1| LIM homeobox transcription factor 1, beta 2 [Danio rerio]
gi|190339774|gb|AAI63333.1| LIM homeobox transcription factor 1, beta 2 [Danio rerio]
Length = 373
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C RPI+DR+LLR+ D S+HE C+ C C L SC++R++KLYC+ DY
Sbjct: 31 CEGCHRPISDRFLLRMNDSSWHEECLQCSVCQQLLTMSCYSRDHKLYCKHDY 82
>gi|18858973|ref|NP_571291.1| LIM/homeobox protein Lhx1 [Danio rerio]
gi|2497670|sp|Q90476.1|LHX1_DANRE RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1
gi|577525|gb|AAA92157.1| homeodomain protein [Danio rerio]
gi|190336961|gb|AAI62664.1| LIM homeobox 1a [Danio rerio]
gi|190339482|gb|AAI62396.1| LIM homeobox 1a [Danio rerio]
Length = 405
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDF 55
>gi|301608740|ref|XP_002933954.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Xenopus
(Silurana) tropicalis]
Length = 533
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 35/53 (66%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C CG I+DR+LLRV D S+HE CV C C L+ +C+ R +LYC+ DYD
Sbjct: 186 CAGCGNTISDRFLLRVNDRSWHECCVKCAACLQILSGTCYYRNRQLYCKEDYD 238
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 6 ECGSCGRPI-TDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+C SC + + ++RV YH C C EC L +E +L CRSDY+ K
Sbjct: 244 KCNSCLKTVLPSELIMRVLSNVYHVACFFCCECERRLERGDEFVLKEGQLLCRSDYEREK 303
Query: 63 K 63
+
Sbjct: 304 E 304
>gi|291232097|ref|XP_002736028.1| PREDICTED: lim 1/5-like [Saccoglossus kowalevskii]
Length = 498
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C RPI DR+LL V D ++H CV C +C +L+ C++RE KLYCR+D+
Sbjct: 5 CAGCDRPILDRFLLNVLDRAWHVKCVQCSDCNCTLSDKCYSREGKLYCRTDF 56
>gi|405971991|gb|EKC36790.1| LIM homeobox transcription factor 1-beta [Crassostrea gigas]
Length = 343
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 34/53 (64%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C SC PI DR+LLRV D+ +HE CV C C L +CF R + YC++DYD
Sbjct: 10 CASCQYPIEDRFLLRVMDLPWHEQCVVCSVCQTQLTRTCFHRNRQFYCKNDYD 62
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 7 CGSCGR-PITDRYLLRVADISYHENCVACVECGHSLAHS--CFTRENKLYCRSDYD 59
C CG I +++R YH+ C C+ECG L C ++ +L+C D++
Sbjct: 70 CNGCGMFVIPTEFVMRAKGYVYHQQCFNCIECGQQLRQGDHCAIKDGQLFCGIDFE 125
>gi|149755774|ref|XP_001493379.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Equus
caballus]
Length = 382
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYE 87
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+CG C I + +++R YH +C C C L +E +L C+ DY+ +
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKER 152
Query: 63 KGSQLVT 69
+ LV+
Sbjct: 153 ELLSLVS 159
>gi|395530698|ref|XP_003767425.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Sarcophilus
harrisii]
Length = 382
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYE 87
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+CG C I + +++R YH +C C C L +E +L C+ DY+ +
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKER 152
Query: 63 KGSQLVT 69
+ LV+
Sbjct: 153 ELLSLVS 159
>gi|301616969|ref|XP_002937919.1| PREDICTED: LIM/homeobox protein LMX-1.2-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 393
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C RPI+DR+L+RV + S+HE C+ C C L SC+ R+ KL+C+ DY
Sbjct: 56 CEGCQRPISDRFLMRVNEASWHEECLQCTVCQQPLTTSCYFRDRKLFCKQDY 107
>gi|301616967|ref|XP_002937918.1| PREDICTED: LIM/homeobox protein LMX-1.2-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 400
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C RPI+DR+L+RV + S+HE C+ C C L SC+ R+ KL+C+ DY
Sbjct: 56 CEGCQRPISDRFLMRVNEASWHEECLQCTVCQQPLTTSCYFRDRKLFCKQDY 107
>gi|410986575|ref|XP_003999585.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Felis
catus]
Length = 382
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYE 87
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+CG C I + +++R YH +C C C L +E +L C+ DY+ +
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKER 152
Query: 63 KGSQLVT 69
+ LV+
Sbjct: 153 ELLSLVS 159
>gi|311253923|ref|XP_003125689.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Sus
scrofa]
Length = 382
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYE 87
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+CG C I + +++R YH +C C C L +E +L C+ DY+ +
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKER 152
Query: 63 KGSQLVT 69
+ LV+
Sbjct: 153 ELLSLVS 159
>gi|47224946|emb|CAG06516.1| unnamed protein product [Tetraodon nigroviridis]
Length = 408
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 37/58 (63%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L CF+RE +LYC++D+ R
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGRLYCKNDFFRR 58
>gi|449477358|ref|XP_004176635.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5
[Taeniopygia guttata]
Length = 328
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE KLYC++D+
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDF 56
>gi|345797790|ref|XP_851352.2| PREDICTED: LIM homeobox transcription factor 1-alpha [Canis lupus
familiaris]
Length = 382
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYE 87
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+CG C I + +++R YH +C C C L +E +L C+ DY+ +
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKER 152
Query: 63 KGSQLVT 69
+ LV+
Sbjct: 153 ELLSLVS 159
>gi|148227168|ref|NP_001083902.1| LIM homeobox transcription factor 1-beta.1 [Xenopus laevis]
gi|82216057|sp|Q8UVR3.1|LMX1B_XENLA RecName: Full=LIM homeobox transcription factor 1-beta.1; AltName:
Full=LIM homeobox protein 1b; Short=Xlmx1b
gi|16974694|gb|AAL32444.1|AF414086_1 LIM homeobox protein 1b [Xenopus laevis]
Length = 400
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C RPI+DR+L+RV + S+HE C+ C C L SC+ R+ KL+C+ DY
Sbjct: 56 CEGCQRPISDRFLMRVNEASWHEECLQCTVCQQPLTTSCYFRDRKLFCKQDY 107
>gi|351696220|gb|EHA99138.1| LIM homeobox transcription factor 1-alpha [Heterocephalus glaber]
Length = 382
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYE 87
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+CG C I + +++R YH +C C C L +E +L C+ DY+ +
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKER 152
Query: 63 KGSQLVT 69
+ LV+
Sbjct: 153 ELLSLVS 159
>gi|426217051|ref|XP_004002767.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Ovis aries]
Length = 382
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYE 87
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+CG C I + +++R YH +C C C L +E +L C+ DY+ +
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKER 152
Query: 63 KGSQLVT 69
+ LV+
Sbjct: 153 ELLSLVS 159
>gi|410930167|ref|XP_003978470.1| PREDICTED: LIM/homeobox protein Lhx1-like [Takifugu rubripes]
Length = 408
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 37/58 (63%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L CF+RE +LYC++D+ R
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGRLYCKNDFFRR 58
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 6 ECGSCGRPITDRYLLRVADIS-YHENCVACVECGHSLAHS---CFTRENKLYCRSDY--D 59
+CG C + I+ L+R A +H NC C+ C L+ ENK C+ DY +
Sbjct: 62 KCGGCFQGISPNDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLSN 121
Query: 60 SRKKGSQLVTV 70
S K + L++V
Sbjct: 122 SNGKDTNLLSV 132
>gi|301756737|ref|XP_002914217.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Ailuropoda melanoleuca]
Length = 382
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYE 87
Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+CG C + + +++R YH +C C C L +E +L C+ DY+ +
Sbjct: 93 KCGGCFEAVAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKER 152
Query: 63 KGSQLVT 69
+ LV+
Sbjct: 153 ELLSLVS 159
>gi|126306172|ref|XP_001363612.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Monodelphis
domestica]
Length = 382
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYE 87
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+CG C I + +++R YH +C C C L +E +L C+ DY+ +
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKER 152
Query: 63 KGSQLVT 69
+ LV+
Sbjct: 153 ELLSLVS 159
>gi|348532229|ref|XP_003453609.1| PREDICTED: LIM/homeobox protein Lhx1-like [Oreochromis niloticus]
Length = 407
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 37/58 (63%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L CF+RE +LYC++D+ R
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGRLYCKNDFFRR 58
>gi|443683990|gb|ELT88059.1| hypothetical protein CAPTEDRAFT_51440, partial [Capitella teleta]
Length = 54
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C CG I+DR+ + V D ++H +CV C +CG L SC+TRE KLYC+SD+
Sbjct: 1 CIGCGSEISDRFFMTVLDQAWHTHCVQCADCGEKLIDSCYTREKKLYCKSDF 52
>gi|348565813|ref|XP_003468697.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Cavia
porcellus]
Length = 382
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYE 87
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+CG C I + +++R YH +C C C L +E +L C+ DY+ +
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKER 152
Query: 63 KGSQLVT 69
+ LV+
Sbjct: 153 ELLSLVS 159
>gi|300797454|ref|NP_001178254.1| LIM homeobox transcription factor 1-alpha [Bos taurus]
gi|296489924|tpg|DAA32037.1| TPA: LIM homeobox transcription factor 1 alpha-like [Bos taurus]
Length = 382
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYE 87
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+CG C I + +++R YH +C C C L +E +L C+ DY+ +
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKER 152
Query: 63 KGSQLVT 69
+ LV+
Sbjct: 153 ELLSLVS 159
>gi|291397514|ref|XP_002715925.1| PREDICTED: LIM homeobox transcription factor 1 alpha-like
[Oryctolagus cuniculus]
Length = 382
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYE 87
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+CG C I + +++R YH +C C C L +E +L C+ DY+ +
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKER 152
Query: 63 KGSQLVT 69
+ LV+
Sbjct: 153 ELLSLVS 159
>gi|344287033|ref|XP_003415260.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Loxodonta
africana]
Length = 382
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVLCASCKEPLETTCFYRDKKLYCKYDYE 87
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+CG C I + +++R YH +C C C L +E +L C+ DY+ +
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKER 152
Query: 63 KGSQLVT 69
+ LV+
Sbjct: 153 ELLSLVS 159
>gi|432894991|ref|XP_004076032.1| PREDICTED: LIM/homeobox protein Lhx1 [Oryzias latipes]
Length = 238
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C EC +L CF+RE +LYC++D+
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGRLYCKNDF 55
>gi|20502369|dbj|BAB91364.1| LIM homeodomain protein [Branchiostoma belcheri]
Length = 402
Score = 64.7 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
PN+ +C C + I DR++L+V D S+H C+ C +C L CF+R+ +YC+ D+ R
Sbjct: 36 PNIPKCAGCEQVILDRFILKVLDRSWHAKCLQCSDCQAQLTDKCFSRDGHVYCKDDFFRR 95
Score = 42.0 bits (97), Expect = 0.054, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C CG+ I ++R A D YH C AC+ C LA + KL C+SDY++
Sbjct: 99 KCAGCGQGIPPTQVVRRAQDKIYHLQCFACIMCKRQLATGDEFYLMEDAKLVCKSDYEAA 158
Query: 62 KK 63
K+
Sbjct: 159 KQ 160
>gi|18858977|ref|NP_571293.1| LIM/homeobox protein Lhx5 [Danio rerio]
gi|1708830|sp|P52889.1|LHX5_DANRE RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox
protein 5; AltName: Full=Homeobox protein LIM-5
gi|840664|gb|AAA99465.1| LIM class homeodomain protein [Danio rerio]
gi|68534671|gb|AAH98523.1| LIM homeobox 5 [Danio rerio]
Length = 399
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C RPI DR+LL V D ++H CV C EC +L CF+R+ KLYC+ D+ R
Sbjct: 2 MVHCAGCERPILDRFLLNVLDRAWHAKCVQCCECNCNLTEKCFSRDGKLYCKIDFFRR 59
>gi|297662848|ref|XP_002809900.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-alpha [Pongo abelii]
Length = 489
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 33/53 (62%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 35 CEGCQRVILDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYE 87
>gi|28893581|ref|NP_796372.1| LIM homeobox transcription factor 1-alpha [Homo sapiens]
gi|291327513|ref|NP_001167540.1| LIM homeobox transcription factor 1-alpha [Homo sapiens]
gi|109019319|ref|XP_001084612.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Macaca mulatta]
gi|109019321|ref|XP_001084727.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 3
[Macaca mulatta]
gi|114561083|ref|XP_001174539.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Pan troglodytes]
gi|114561085|ref|XP_001174542.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 3
[Pan troglodytes]
gi|296229940|ref|XP_002760489.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Callithrix
jacchus]
gi|397508364|ref|XP_003824628.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Pan paniscus]
gi|397508366|ref|XP_003824629.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Pan paniscus]
gi|402858034|ref|XP_003893535.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Papio anubis]
gi|402858036|ref|XP_003893536.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Papio anubis]
gi|426332555|ref|XP_004027869.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Gorilla gorilla gorilla]
gi|426332557|ref|XP_004027870.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Gorilla gorilla gorilla]
gi|27923801|sp|Q8TE12.1|LMX1A_HUMAN RecName: Full=LIM homeobox transcription factor 1-alpha; AltName:
Full=LIM/homeobox protein 1.1; Short=LMX-1.1; AltName:
Full=LIM/homeobox protein LMX1A
gi|19879681|gb|AAL82892.1| LIM homeobox transcription factor 1 alpha [Homo sapiens]
gi|119611150|gb|EAW90744.1| LIM homeobox transcription factor 1, alpha, isoform CRA_b [Homo
sapiens]
gi|182887815|gb|AAI60062.1| LIM homeobox transcription factor 1, alpha [synthetic construct]
gi|193785405|dbj|BAG54558.1| unnamed protein product [Homo sapiens]
gi|208966672|dbj|BAG73350.1| LIM homeobox transcription factor 1, alpha [synthetic construct]
gi|355558990|gb|EHH15770.1| hypothetical protein EGK_01906 [Macaca mulatta]
gi|355746154|gb|EHH50779.1| hypothetical protein EGM_01656 [Macaca fascicularis]
Length = 382
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 33/53 (62%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 35 CEGCQRVILDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYE 87
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+CG C I + +++R YH +C C C L +E +L C+ DY+ +
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKER 152
Query: 63 KGSQLVT 69
+ LV+
Sbjct: 153 ELLSLVS 159
>gi|395825137|ref|XP_003785798.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Otolemur
garnettii]
Length = 382
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 33/53 (62%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 35 CEGCQRVILDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYE 87
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+CG C I + +++R YH +C C C L +E +L C+ DY+ +
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKER 152
Query: 63 KGSQLVT 69
+ LV+
Sbjct: 153 ELLSLVS 159
>gi|195163209|ref|XP_002022444.1| GL13034 [Drosophila persimilis]
gi|194104436|gb|EDW26479.1| GL13034 [Drosophila persimilis]
Length = 332
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C +PI D++LL V + ++H +CV C EC L CF+RE+KLYCR+D+
Sbjct: 24 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDF 75
>gi|18858979|ref|NP_571282.1| LIM homeobox 1b [Danio rerio]
gi|2155289|gb|AAB58796.1| LIM class homeodomain protein [Danio rerio]
gi|190336839|gb|AAI62280.1| LIM homeobox 1b [Danio rerio]
gi|190340149|gb|AAI62303.1| LIM homeobox 1b [Danio rerio]
Length = 402
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C RPI DR+LL V D ++H CV C +C SL CF+RE +LYC++D+
Sbjct: 1 MVHCAGCERPILDRFLLSVLDRAWHAKCVQCCDCKCSLTDRCFSREGRLYCKNDF 55
>gi|403272543|ref|XP_003928115.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Saimiri boliviensis boliviensis]
gi|403272545|ref|XP_003928116.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Saimiri boliviensis boliviensis]
Length = 382
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 33/53 (62%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 35 CEGCQRVILDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYE 87
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+CG C I + +++R YH +C C C L +E +L C+ DY+ +
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKER 152
Query: 63 KGSQLVT 69
+ LV+
Sbjct: 153 ELLSLVS 159
>gi|260793678|ref|XP_002591838.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
gi|229277049|gb|EEN47849.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
Length = 402
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
PN+ +C C + I DR++L+V D S+H C+ C +C L CF+R+ +YC+ D+ R
Sbjct: 36 PNIPKCAGCEQVILDRFILKVLDRSWHAKCLQCSDCQAQLTDKCFSRDGHVYCKDDFFRR 95
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C CG+ I ++R A D YH C AC+ C LA + KL C+SDY++
Sbjct: 99 KCAGCGQGIPPTQVVRRAQDKIYHLQCFACIMCKRQLATGDEFYLMEDAKLVCKSDYEAA 158
Query: 62 KK 63
K+
Sbjct: 159 KQ 160
>gi|432899669|ref|XP_004076609.1| PREDICTED: LIM/homeobox protein Lhx1-like [Oryzias latipes]
Length = 402
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C SC +PI DR+LL+V D +H CV C EC SL CF+R+ +LYC++D+
Sbjct: 1 MLHCTSCEKPILDRFLLKVLDRPWHVKCVQCCECKCSLTEKCFSRDGRLYCKNDF 55
>gi|327277087|ref|XP_003223297.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Anolis
carolinensis]
Length = 381
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 3 NMKE-CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
M+E C C PI+DR+LLRV + S+HE CV C C L+ +C+ R +LYC+ DY+
Sbjct: 36 KMREVCAGCNTPISDRFLLRVNERSWHEGCVKCAACLQPLSGTCYCRNRQLYCKHDYE 93
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+C C + + +++RV + YH +C +C EC L +E +L CRSDY+ +
Sbjct: 99 KCSGCLKAVAPSEFIMRVLENVYHVHCFSCCECERRLQRGDEFVLKEGQLLCRSDYEKER 158
Query: 63 K 63
+
Sbjct: 159 E 159
>gi|224058880|ref|XP_002190501.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Taeniopygia
guttata]
Length = 379
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 33/53 (62%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 33 CEGCQRVILDRFLLRLNDSLWHEQCVQCASCKEPLQTTCFYRDKKLYCKLDYE 85
>gi|449268911|gb|EMC79740.1| LIM homeobox transcription factor 1-alpha [Columba livia]
Length = 343
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 4 MKE-CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
M+E C C PI+DR+LLRV + S+HE CV C C LA +C+ R +LYC+ DY+
Sbjct: 1 MREVCAGCDTPISDRFLLRVNERSWHEGCVKCAVCLQPLAGTCYCRNRQLYCKHDYE 57
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 6 ECGSCGRPITDRYL-LRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+C SC + I L +RV + YH +C C EC L +E +L CRSDY+ K
Sbjct: 63 KCSSCLKAIAPSELIMRVLENVYHVHCFYCCECERRLQRGDEFVLKEGQLLCRSDYEKEK 122
Query: 63 K 63
+
Sbjct: 123 E 123
>gi|371573884|gb|AEX38312.1| Lhx1 [Mnemiopsis leidyi]
Length = 424
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSRKKGS 65
C C I D++L++V D ++H C+ CV+CG LA CFTR K YC D++ + S
Sbjct: 5 CAGCNGKIHDKFLMKVLDKTWHSECLVCVDCGVVLADQCFTRNGKFYCSKDFEKSQASS 63
>gi|383792181|ref|NP_001244317.1| LIM homeobox transcription factor 1-alpha [Gallus gallus]
Length = 380
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 33/53 (62%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 35 CEGCQRVIADRFLLRLNDSLWHERCVQCTSCKEPLHTTCFYRDKKLYCKLDYE 87
>gi|291237424|ref|XP_002738638.1| PREDICTED: Lim homeobox transcription factor [Saccoglossus
kowalevskii]
Length = 441
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C +PI DR+L+RV + S+HE C+ C C L+ SC+ ++ KLYC+ DY+
Sbjct: 41 CAGCQQPIEDRFLMRVMENSWHEQCLQCSVCQSPLSRSCYFKDRKLYCKGDYE 93
>gi|328705917|ref|XP_001945631.2| PREDICTED: LIM/homeobox protein Lhx5-like [Acyrthosiphon pisum]
Length = 555
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
M C C +PI D++LL V D ++H CV C +C +L+ C++R+ K+ C+ D+ R
Sbjct: 114 MMSCAGCDKPIMDKFLLNVLDRAWHAECVKCADCHGTLSDKCYSRDGKILCKPDFYRR 171
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 5 KECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
K+C C + I+ L+R A D +H NC C+ C L+ +NK C+ DY S
Sbjct: 174 KKCNGCAQGISPTDLVRKARDKVFHLNCFTCMICRKQLSTGEELYVLEDNKFICKDDYIS 233
Query: 61 RKKGSQLVTVLFYS 74
K G Q + L YS
Sbjct: 234 GKNG-QGIDSLTYS 246
>gi|281348858|gb|EFB24442.1| hypothetical protein PANDA_002084 [Ailuropoda melanoleuca]
Length = 368
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 21 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYE 73
>gi|307197382|gb|EFN78657.1| LIM/homeobox protein Lhx5 [Harpegnathos saltator]
Length = 142
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C +PI D+YLL V D ++H CV C +C +L CF+RE KL+CR+D+
Sbjct: 21 CAGCDKPIMDQYLLNVLDRAWHVECVRCFDCRITLQDKCFSREAKLFCRNDF 72
>gi|326666245|ref|XP_001922131.3| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Danio
rerio]
Length = 396
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C PI DR+LLRV ++S+HE CV C C +L+ +C+ R+ LYC+ DY+
Sbjct: 60 CAGCESPIADRFLLRVNELSWHETCVKCAVCRSALSGTCYCRDRLLYCKHDYE 112
>gi|322796242|gb|EFZ18818.1| hypothetical protein SINV_14480 [Solenopsis invicta]
Length = 58
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C +PI D+YLL V D ++H CV C +C +L CF+RE KL+CR+D+
Sbjct: 5 CAGCEKPIMDQYLLNVLDRAWHVECVRCFDCRAALQDKCFSREAKLFCRNDF 56
>gi|547859|sp|Q04650.1|LMX1A_MESAU RecName: Full=LIM homeobox transcription factor 1-alpha; AltName:
Full=LIM/homeobox protein LMX1A; Short=LIM/homeobox
protein 1; Short=LMX-1
gi|587461|emb|CAA57163.1| lmx1.1 [Mesocricetus auratus]
Length = 382
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ Y+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYHYE 87
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+CG C I + +++R YH +C C C L +E +L C+ DY+ +
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKER 152
Query: 63 KGSQLVT 69
+ LV+
Sbjct: 153 ELLSLVS 159
>gi|354486854|ref|XP_003505592.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Cricetulus griseus]
Length = 382
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ Y+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYHYE 87
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+CG C I + +++R YH +C C C L +E +L C+ DY+ +
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKER 152
Query: 63 KGSQLVT 69
+ LV+
Sbjct: 153 ELLSLVS 159
>gi|47219374|emb|CAG01537.1| unnamed protein product [Tetraodon nigroviridis]
Length = 390
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 12 RPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+PI DR+LL+V D +H CV C EC +L+ CF+RE KLYC++D+ R
Sbjct: 2 KPILDRFLLKVLDRPWHVKCVHCCECKCTLSEKCFSREGKLYCKNDFFRR 51
>gi|444730606|gb|ELW70984.1| LIM homeobox transcription factor 1-alpha [Tupaia chinensis]
Length = 265
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKFDYE 87
>gi|158187529|ref|NP_001099437.2| LIM homeobox transcription factor 1 alpha [Rattus norvegicus]
Length = 382
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ Y+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYHYE 87
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+CG C I + +++R YH +C C C L +E +L C+ DY+ +
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKER 152
Query: 63 KGSQLVT 69
+ LV+
Sbjct: 153 ELLSLVS 159
>gi|17298670|ref|NP_387501.1| LIM homeobox transcription factor 1-alpha [Mus musculus]
gi|27923804|sp|Q9JKU8.1|LMX1A_MOUSE RecName: Full=LIM homeobox transcription factor 1-alpha; AltName:
Full=LIM/homeobox protein 1.1; Short=LMX-1.1; AltName:
Full=LIM/homeobox protein LMX1A
gi|7230571|gb|AAF43012.1|AF226662_1 lim homeodomain-containing transcription factor [Mus musculus]
gi|26336939|dbj|BAC32153.1| unnamed protein product [Mus musculus]
gi|80477081|gb|AAI09168.1| LIM homeobox transcription factor 1 alpha [Mus musculus]
gi|80478204|gb|AAI09169.1| LIM homeobox transcription factor 1 alpha [Mus musculus]
Length = 382
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ Y+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYHYE 87
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+CG C I + +++R YH +C C C L +E +L C+ DY+ +
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKER 152
Query: 63 KGSQLVT 69
+ LV+
Sbjct: 153 ELLSLVS 159
>gi|321455236|gb|EFX66374.1| hypothetical protein DAPPUDRAFT_11288 [Daphnia pulex]
Length = 349
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C R I D++LL V D ++H CV C +C + LA CF+R+ KLYCR+D+
Sbjct: 1 CAGCDRAILDKFLLTVLDRTWHAECVRCADCRNILAERCFSRDGKLYCRTDF 52
>gi|443711321|gb|ELU05149.1| hypothetical protein CAPTEDRAFT_228137 [Capitella teleta]
Length = 506
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+ +C CG I DR++L+V D S+H C+ C +C L+ CF++ +K+YC+ D+ R
Sbjct: 141 IPKCAGCGDAILDRFILKVLDRSWHSKCLMCADCNGHLSDKCFSKGDKVYCKEDFFRR 198
>gi|327270281|ref|XP_003219918.1| PREDICTED: LIM/homeobox protein Lhx4-like [Anolis carolinensis]
Length = 449
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
+P + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 83 LPEIPQCAGCNQHILDKFILKVLDRHWHGSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 142
Query: 61 R 61
R
Sbjct: 143 R 143
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 147 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 206
Query: 62 KK 63
K+
Sbjct: 207 KQ 208
>gi|332220030|ref|XP_003259160.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-alpha [Nomascus leucogenys]
Length = 368
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 33/53 (62%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 35 CEGCQRVILDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYE 87
>gi|118343866|ref|NP_001071756.1| transcription factor protein [Ciona intestinalis]
gi|70570111|dbj|BAE06538.1| transcription factor protein [Ciona intestinalis]
Length = 625
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY-DSRK 62
M C C I D+YLL + S+HE+C CV C L SCF + +LYC+ DY +RK
Sbjct: 163 MSICQGCDYLIEDQYLLNIGGFSWHESCAKCVICRLKLQQSCFFSDGQLYCKKDYQQTRK 222
Query: 63 KGS---------QLVTVLFYSMYVHSVMKFHTIT 87
K S +LV + S YV+ V F +T
Sbjct: 223 KCSGCGSKIESEELVMRVATSGYVYHVGCFACVT 256
>gi|109019176|ref|XP_001115086.1| PREDICTED: LIM/homeobox protein Lhx4-like isoform 2 [Macaca
mulatta]
Length = 390
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D D
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDPDR 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|308220074|gb|ADO22609.1| LIM class homeobox transcription factor Lhx1.5 [Mnemiopsis
leidyi]
Length = 288
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSRKKGS 65
C C I D++L++V D ++H C+ CV+CG LA CFTR K YC D++ + S
Sbjct: 5 CAGCNGKIHDKFLMKVLDKTWHSECLVCVDCGVVLADQCFTRNGKFYCSKDFEKSQASS 63
>gi|321469905|gb|EFX80883.1| hypothetical protein DAPPUDRAFT_50562 [Daphnia pulex]
Length = 315
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG PI D+Y+LRVA D+ +H +C+ CVECG L +CF R+ K +CR DY
Sbjct: 1 CVGCGSPIQDQYILRVAPDLEWHASCLKCVECGIFLDENCTCFVRDGKTFCRRDY 55
>gi|405977546|gb|EKC41989.1| LIM/homeobox protein Lhx3 [Crassostrea gigas]
Length = 432
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
+ +C CG PI DR++L+V D S+H C+ C +C L+ CF++ K++C+ D+
Sbjct: 44 IPKCAGCGEPILDRFILKVLDRSWHSRCLQCHDCHARLSDKCFSKGEKVFCKDDF 98
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C C + I ++R A D YH C AC+ C L + KL C++DY+S
Sbjct: 140 KCAGCEKGIPPTEVVRRAQDNVYHLECFACLMCSRQLNTGDEFYLMEDRKLVCKADYESA 199
Query: 62 K 62
K
Sbjct: 200 K 200
>gi|348508944|ref|XP_003442012.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Oreochromis niloticus]
Length = 368
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C PI DR+LLRV + S+HE CV C C +L +C++R+ LYC+ DY+
Sbjct: 31 CAGCESPIADRFLLRVNERSWHETCVKCAVCLSALTGTCYSRDRLLYCKHDYE 83
>gi|449478428|ref|XP_002187534.2| PREDICTED: LIM/homeobox protein Lhx3 [Taeniopygia guttata]
Length = 665
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
P + C C + I DR++L+V D +H C+ C +C LA CF+R + +YC+ D+ R
Sbjct: 23 PEIPLCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFSRGDGVYCKEDFFKR 82
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA +++L C++DY++
Sbjct: 86 KCAACHQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCKADYETA 145
Query: 62 KK 63
K+
Sbjct: 146 KQ 147
>gi|390335971|ref|XP_780701.3| PREDICTED: LIM/homeobox protein Lhx3-like [Strongylocentrotus
purpuratus]
Length = 545
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C PI DR++L+V D ++H C+ CV+C L CF+R+ ++C+ D+ R
Sbjct: 147 CAGCDHPILDRFILKVVDRAWHAKCLRCVDCNAQLTDRCFSRDGGVFCKEDFFKR 201
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C SC + I ++R A D YH +C C+ C L+ +NKL C+ DY++
Sbjct: 205 KCSSCEKGIAPTEIVRRALDNVYHLHCFCCIICTRQLSTGDEFFLMTDNKLVCKQDYEAA 264
Query: 62 K 62
K
Sbjct: 265 K 265
>gi|148232304|ref|NP_001081623.1| LIM/homeobox protein Lhx3 [Xenopus laevis]
gi|547856|sp|P36200.1|LHX3_XENLA RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox
protein 3; AltName: Full=Homeobox protein LIM-3;
Short=xLIM-3
gi|407072|emb|CAA80402.1| Xlim-3 [Xenopus laevis]
gi|213623314|gb|AAI69580.1| Xlim-3 protein [Xenopus laevis]
Length = 395
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
P + +C C + I DR++L+V D +H C+ C +C LA CF+R + +YC+ D+ R
Sbjct: 23 PEIPQCAGCNQHIVDRFILKVLDRHWHSKCLKCNDCQIQLAEKCFSRGDSVYCKDDFFKR 82
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A + YH +C AC+ C LA +++L C++DY++
Sbjct: 86 KCAACQQGIPPTQVVRRAQEFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCKADYETA 145
Query: 62 KK 63
K+
Sbjct: 146 KQ 147
>gi|397508667|ref|XP_003824769.1| PREDICTED: LIM/homeobox protein Lhx4 [Pan paniscus]
gi|410034179|ref|XP_524984.3| PREDICTED: LIM/homeobox protein Lhx4 [Pan troglodytes]
Length = 466
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 100 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 159
Query: 61 R 61
R
Sbjct: 160 R 160
Score = 38.5 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 164 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 223
Query: 62 KK 63
K+
Sbjct: 224 KQ 225
>gi|326924822|ref|XP_003208624.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-alpha-like [Meleagris gallopavo]
Length = 367
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 33/53 (62%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I DR+LLR+ D +HE CV C C L +CF R+ KLYC+ DY+
Sbjct: 22 CEGCQRVIADRFLLRLNDSLWHERCVQCTSCKEPLHTTCFYRDKKLYCKLDYE 74
>gi|229619792|dbj|BAH58094.1| LIM homeobox protein 3 [Hemicentrotus pulcherrimus]
Length = 485
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C PI DR++L+V D ++H C+ CV+C L CF+R+ ++C+ D+ R
Sbjct: 87 CAGCDHPILDRFILKVVDRAWHAKCLRCVDCNAQLTDRCFSRDGGVFCKEDFFKR 141
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C SC + I ++R A D YH +C C+ C L+ +NKL C+ DY++
Sbjct: 145 KCSSCEKGIAPTEIVRRALDNVYHLHCFCCIICTRQLSTGDEFFLMTDNKLVCKQDYEAA 204
Query: 62 K 62
K
Sbjct: 205 K 205
>gi|260793680|ref|XP_002591839.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
gi|229277050|gb|EEN47850.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
Length = 278
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
PN+ +C C + I DR++L+V D S+H C+ C +C L CF+R+ +YC+ D+ R
Sbjct: 36 PNIPKCAGCEQVILDRFILKVLDRSWHAKCLQCSDCQAQLTDKCFSRDGHVYCKDDFFRR 95
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C CG+ I ++R A D YH C AC+ C LA + KL C+SDY++
Sbjct: 99 KCAGCGQGIPPTQVVRRAQDKIYHLQCFACIMCKRQLATGDEFYLMEDAKLVCKSDYEAA 158
Query: 62 KK 63
K+
Sbjct: 159 KQ 160
>gi|171544941|ref|NP_001116387.1| LIM/homeobox protein Lhx3 [Oryzias latipes]
gi|157410515|gb|ABV53980.1| LIM/homeobox protein Lhx3 [Oryzias latipes]
Length = 401
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSRKKGSQ 66
C C + I DR++L+V D +H C+ C +C LA CF+R + +YC+ D+ R+ G++
Sbjct: 30 CAGCNQHIVDRFILKVLDRHWHGKCLKCSDCQAQLAEKCFSRGDSVYCKDDFFKRRFGTK 89
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLA---HSCFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA +++L C++DY++
Sbjct: 89 KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKTDYETA 148
Query: 62 KK 63
K+
Sbjct: 149 KQ 150
>gi|351699208|gb|EHB02127.1| LIM/homeobox protein Lhx4 [Heterocephalus glaber]
Length = 390
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|344254045|gb|EGW10149.1| LIM/homeobox protein Lhx4 [Cricetulus griseus]
Length = 397
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
+P + +C C + I D+++L+V D +H +C+ C +C L CF+R +YC+ D+
Sbjct: 4 LPEIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLVDRCFSRAGSVYCKEDFFK 63
Query: 61 R 61
R
Sbjct: 64 R 64
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 68 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 127
Query: 62 KKGSQL 67
K+ L
Sbjct: 128 KQNGCL 133
>gi|348578364|ref|XP_003474953.1| PREDICTED: LIM/homeobox protein Lhx4 [Cavia porcellus]
Length = 390
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|391340116|ref|XP_003744391.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Metaseiulus
occidentalis]
Length = 460
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H +C+ CVEC L SC F RE K YC+SDY
Sbjct: 104 CVGCGSQIQDQYILRVSPDLEWHASCLKCVECLQFLDESCTCFVREGKTYCKSDY 158
Score = 34.7 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYD 59
+C CG + +++R +H +C C+ C L RE++L+C++D+D
Sbjct: 165 KCSKCGLSFSRSDFVMRARGKIFHIDCFRCIACSRQLIPGDEFAIREDELFCKADHD 221
>gi|335295820|ref|XP_003357609.1| PREDICTED: LIM/homeobox protein Lhx4-like [Sus scrofa]
Length = 390
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH C AC+ C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLPCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|432115998|gb|ELK37137.1| LIM/homeobox protein Lhx4 [Myotis davidii]
Length = 389
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 23 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 82
Query: 61 R 61
R
Sbjct: 83 R 83
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 87 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 146
Query: 62 KK 63
K+
Sbjct: 147 KQ 148
>gi|300795912|ref|NP_001179714.1| LIM/homeobox protein Lhx4 [Bos taurus]
gi|296479119|tpg|DAA21234.1| TPA: LIM homeobox 4 [Bos taurus]
gi|440901216|gb|ELR52198.1| LIM/homeobox protein Lhx4 [Bos grunniens mutus]
Length = 390
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|73960401|ref|XP_547420.2| PREDICTED: LIM/homeobox protein Lhx4 isoform 1 [Canis lupus
familiaris]
Length = 390
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|410986072|ref|XP_003999336.1| PREDICTED: LIM/homeobox protein Lhx4 [Felis catus]
Length = 390
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|395824959|ref|XP_003785717.1| PREDICTED: LIM/homeobox protein Lhx4 [Otolemur garnettii]
Length = 390
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C ACV C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACVICNRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|297662584|ref|XP_002809779.1| PREDICTED: LIM/homeobox protein Lhx4 [Pongo abelii]
Length = 390
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|190684642|ref|NP_034842.2| LIM/homeobox protein Lhx4 [Mus musculus]
gi|209572773|sp|P53776.4|LHX4_MOUSE RecName: Full=LIM/homeobox protein Lhx4; Short=LIM homeobox
protein 4
gi|148707456|gb|EDL39403.1| LIM homeobox protein 4, isoform CRA_b [Mus musculus]
Length = 390
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|29437129|gb|AAH49834.1| Lhx4 protein [Mus musculus]
Length = 390
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|426332930|ref|XP_004028045.1| PREDICTED: LIM/homeobox protein Lhx4 [Gorilla gorilla gorilla]
Length = 390
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|18026224|gb|AAL07260.1| LIM homeodomain protein [Homo sapiens]
Length = 390
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|301770851|ref|XP_002920842.1| PREDICTED: LIM/homeobox protein Lhx4-like [Ailuropoda
melanoleuca]
Length = 390
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C +CV C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFSCVICNRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|402857943|ref|XP_003893495.1| PREDICTED: LIM/homeobox protein Lhx4 [Papio anubis]
gi|355558975|gb|EHH15755.1| hypothetical protein EGK_01889 [Macaca mulatta]
Length = 390
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|194210370|ref|XP_001914860.1| PREDICTED: LIM/homeobox protein Lhx4-like [Equus caballus]
Length = 390
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|426239972|ref|XP_004013890.1| PREDICTED: LIM/homeobox protein Lhx4 [Ovis aries]
Length = 390
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|15375314|ref|NP_203129.1| LIM/homeobox protein Lhx4 [Homo sapiens]
gi|209572644|sp|Q969G2.2|LHX4_HUMAN RecName: Full=LIM/homeobox protein Lhx4; Short=LIM homeobox
protein 4
gi|14599448|gb|AAK70923.1|AF179849_1 LIM homeobox protein 4 [Homo sapiens]
gi|22094433|gb|AAM91896.1|AF405430_1 LIM homeobox protein 4 [Homo sapiens]
gi|15079940|gb|AAH11759.1| LIM homeobox 4 [Homo sapiens]
gi|123988108|gb|ABM83830.1| LIM homeobox 4 [synthetic construct]
gi|123999145|gb|ABM87154.1| LIM homeobox 4 [synthetic construct]
gi|261861646|dbj|BAI47345.1| LIM homeobox 4 [synthetic construct]
Length = 390
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|229619776|dbj|BAH58087.1| LIM homeobox protein 1 [Nematostella vectensis]
Length = 358
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
+++C C PI D++LL+V D +H CV C +C L CF+RE KL+C++D+
Sbjct: 2 VQQCAGCQLPIADKFLLKVLDGVWHAQCVQCSDCKCPLTERCFSREGKLFCKTDF 56
>gi|72535130|ref|NP_001025506.1| LIM/homeobox protein Lhx3 [Gallus gallus]
gi|1708828|sp|P53412.1|LHX3_CHICK RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox
protein 3; AltName: Full=Homeobox protein LIM-3
gi|531185|gb|AAA62174.1| amino acid feature: LIM1, bp 82 .. 225; amino acid feature: LIM2,
bp 259 .. 414; amino acid feature: homeodomain, bp 457
.. 636 [Gallus gallus]
Length = 395
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
P + C C + I DR++L+V D +H C+ C +C LA CF+R + +YC+ D+ R
Sbjct: 23 PEIPLCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFSRGDGVYCKEDFFKR 82
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA +++L C++DY++
Sbjct: 86 KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCKADYETA 145
Query: 62 KK 63
K+
Sbjct: 146 KQ 147
>gi|403266388|ref|XP_003925368.1| PREDICTED: LIM/homeobox protein Lhx4 [Saimiri boliviensis
boliviensis]
Length = 390
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICTRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|196011854|ref|XP_002115790.1| hypothetical protein TRIADDRAFT_30033 [Trichoplax adhaerens]
gi|190581566|gb|EDV21642.1| hypothetical protein TRIADDRAFT_30033 [Trichoplax adhaerens]
Length = 292
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C PI D++LL V D +H CV C +C L+ CF+R+ KLYCR+D+
Sbjct: 1 MISCAGCQLPICDKFLLSVLDRKWHTKCVQCSQCKVQLSEKCFSRDGKLYCRNDF 55
>gi|296229653|ref|XP_002760359.1| PREDICTED: LIM/homeobox protein Lhx4 [Callithrix jacchus]
Length = 390
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICTRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|119611484|gb|EAW91078.1| LIM homeobox 4 [Homo sapiens]
Length = 390
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|344278250|ref|XP_003410909.1| PREDICTED: LIM/homeobox protein Lhx4-like [Loxodonta africana]
Length = 390
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|156379960|ref|XP_001631723.1| predicted protein [Nematostella vectensis]
gi|156218768|gb|EDO39660.1| predicted protein [Nematostella vectensis]
Length = 213
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+++C C PI D++LL+V D +H CV C +C L CF+RE KL+C++D+ R
Sbjct: 2 VQQCAGCQLPIADKFLLKVLDGVWHAQCVQCSDCKCPLTERCFSREGKLFCKTDFYRR 59
>gi|443694942|gb|ELT95960.1| hypothetical protein CAPTEDRAFT_39289, partial [Capitella teleta]
Length = 118
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C CG+ I DR+LL+ A S+HE C++C CG L SCF ++ +L C++DY
Sbjct: 3 CFGCGQAIADRFLLKAAGRSWHEECLSCNACGVQLTSSCFAKDGRLLCKADY 54
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 7 CGSCGRPITDRYL-LRVADIS---YHENCVACVECGHSLAHS--CFTRENKLYCRSD 57
C CG+ +T L +R D+ YH +C C+ CGH L+ + R+ +L+C+ D
Sbjct: 62 CSGCGQAVTGGQLVMRSGDVGGRVYHASCFCCIACGHQLSKGDQYYIRDGRLFCQLD 118
>gi|340722532|ref|XP_003399658.1| PREDICTED: LIM/homeobox protein Lhx3-like [Bombus terrestris]
Length = 486
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
P++ +CG C I D+Y+LRV + +H C+ C +CG L CF R ++C+ D+
Sbjct: 106 PSIPKCGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDF 162
>gi|328723694|ref|XP_001946328.2| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Acyrthosiphon pisum]
Length = 415
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 31/53 (58%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C I DRY++RV+ SYHE C+ C C L SCF KLYCR DYD
Sbjct: 39 CAKCECTIADRYIMRVSGRSYHERCLKCTTCSLKLDRSCFVWNAKLYCRQDYD 91
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 5 KECGSCGRPITDRYL-LRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYD 59
+ CGSCG I L +R + +HE C CV CG L + ++L+CR DY+
Sbjct: 96 RSCGSCGDHIAAGELVMRAGECVFHEQCFVCVVCGIRLCTGDQYVIKHSQLFCRPDYE 153
>gi|444730284|gb|ELW70671.1| Insulin enhancer protein ISL-2 [Tupaia chinensis]
Length = 577
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H +C+ C EC L +C F R+ K YC+ DY
Sbjct: 33 PGTAMCVGCGSQIHDQFILRVSPDLEWHASCLKCAECSQYLDETCTCFVRDGKTYCKRDY 92
Query: 59 DSRK 62
SR+
Sbjct: 93 VSRQ 96
>gi|291397314|ref|XP_002715058.1| PREDICTED: LIM homeobox protein 4 [Oryctolagus cuniculus]
Length = 390
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSFYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|148707230|gb|EDL39177.1| LIM homeobox transcription factor 1 alpha [Mus musculus]
Length = 352
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ Y+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYHYE 87
>gi|357631671|gb|EHJ79140.1| lim1 [Danaus plexippus]
Length = 162
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C +PI D++LL V + ++H CV C +C LA C++R+NKL+CR+D+ R
Sbjct: 3 CAGCEKPILDKFLLHVLERAWHAACVRCADCRAPLADKCYSRDNKLFCRNDFFRR 57
>gi|432868110|ref|XP_004071416.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Oryzias
latipes]
Length = 398
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C PI+DR+LLRV + S+HE CV C C +L +C+ R+ LYC+ DY+
Sbjct: 55 CAGCESPISDRFLLRVNERSWHETCVKCAVCLSTLTGTCYCRDRLLYCKLDYE 107
>gi|410902629|ref|XP_003964796.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Takifugu rubripes]
Length = 376
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C PI DR+LLRV + S+HE CV C C +L +C+ R+ LYC+ DY+
Sbjct: 32 CAGCEAPIADRFLLRVNERSWHETCVKCAVCLSALTGTCYCRDRLLYCKHDYE 84
>gi|307174398|gb|EFN64917.1| LIM/homeobox protein Lhx3 [Camponotus floridanus]
Length = 467
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
P + +CG C I D+Y+LRV + +H C+ C +CG L CF R ++C+ D+ R
Sbjct: 82 PTIPKCGGCQEVILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFFKR 141
>gi|348535047|ref|XP_003455013.1| PREDICTED: LIM/homeobox protein Lhx3-like [Oreochromis niloticus]
Length = 400
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+V D +H C+ C +C LA CFTR + +YC+ D+ R
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQAQLADKCFTRGDSVYCKDDFFKR 82
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLA---HSCFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA +++L C++DY++
Sbjct: 86 KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKADYETA 145
Query: 62 KK 63
K+
Sbjct: 146 KQ 147
>gi|149058121|gb|EDM09278.1| LIM homeobox transcription factor 1 alpha (predicted) [Rattus
norvegicus]
Length = 263
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ Y+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYHYE 87
>gi|13516919|dbj|BAB40339.1| islet [Halocynthia roretzi]
Length = 432
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
C CG PI D+Y+LRVA ++ +H C+ C +CG L + +CF R+ K YC+ DY
Sbjct: 25 CVGCGTPIQDQYMLRVAPNLEWHAGCLKCADCGLHLDESRTCFVRDGKTYCKQDY 79
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYD 59
+C CG T + +++R + YH C CV C L RE+ L+C++D+D
Sbjct: 86 KCNKCGLGFTKNDFVMRARNKIYHIECFKCVACSKQLIPGDEFALREDGLFCKADHD 142
>gi|326923371|ref|XP_003207910.1| PREDICTED: LIM/homeobox protein Lhx3-like [Meleagris gallopavo]
Length = 399
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+V D +H C+ C +C LA CF+R + +YC+ D+ R
Sbjct: 32 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFSRGDGVYCKEDFFKR 86
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA +++L C++DY++
Sbjct: 90 KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCKADYETA 149
Query: 62 KK 63
K+
Sbjct: 150 KQ 151
>gi|344236824|gb|EGV92927.1| LIM homeobox transcription factor 1-alpha [Cricetulus griseus]
Length = 88
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C R I+DR+LLR+ D +HE CV C C L +CF R+ KLYC+ Y+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYHYE 87
>gi|47221465|emb|CAG08127.1| unnamed protein product [Tetraodon nigroviridis]
Length = 535
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLA--HSCFTRENKLYCRSDYD 59
P +C SCG I DRYLL+V ++++H C+ C C SL +SC+ + +++C+ DY
Sbjct: 14 PAKNQCASCGMDIQDRYLLKVNNLNWHLGCLECSVCRASLRQHNSCYVKNKEIFCKLDYF 73
Query: 60 SR 61
SR
Sbjct: 74 SR 75
>gi|328708425|ref|XP_001944208.2| PREDICTED: LIM/homeobox protein Lhx3-like [Acyrthosiphon pisum]
Length = 375
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
+ ++ +CG C I DR++L+V + ++H C+ C ECG +LA CF R L+C+ D+
Sbjct: 39 LASIPKCGGCQELILDRFILKVLERTWHARCLKCNECGATLADKCFARNGMLFCKDDFFK 98
Query: 61 R 61
R
Sbjct: 99 R 99
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C C G P T + + R D+ YH C ACV CG +L + KL C+ DY++
Sbjct: 103 KCAGCDLGIPPT-QIVRRAQDLVYHLQCFACVMCGRTLNTGDEFYLMEDRKLVCKPDYEA 161
Query: 61 RK 62
K
Sbjct: 162 AK 163
>gi|441636332|ref|XP_003259172.2| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx4 [Nomascus
leucogenys]
Length = 415
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+ +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+ R
Sbjct: 71 IPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFKR 128
>gi|354475897|ref|XP_003500163.1| PREDICTED: LIM/homeobox protein Lhx4 [Cricetulus griseus]
Length = 390
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C L CF+R +YC+ D+
Sbjct: 24 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLVDRCFSRAGSVYCKEDFFK 83
Query: 61 R 61
R
Sbjct: 84 R 84
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 88 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 147
Query: 62 KK 63
K+
Sbjct: 148 KQ 149
>gi|391759011|dbj|BAM22649.1| LIM homeobox 3/4, partial [Eptatretus burgeri]
Length = 205
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
CG C PI DR+LL+ + S+H +C+ C +C L+ CF+R+ LYC+ D+ R
Sbjct: 32 CGGCSLPIGDRFLLKALERSWHASCLRCRDCQSPLSERCFSRDGALYCKEDFFRR 86
>gi|363736513|ref|XP_001235592.2| PREDICTED: LIM/homeobox protein Lhx4 [Gallus gallus]
Length = 374
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+ +C C + I D+++L+V D +H +C+ C +C LA CF R +YC+ D+ R
Sbjct: 13 IPQCAGCSQHILDKFILKVLDRHWHSSCLKCADCQMQLAERCFARAGSVYCKEDFFKR 70
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 74 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFYLMEDGRLVCKEDYETA 133
Query: 62 KK 63
K+
Sbjct: 134 KQ 135
>gi|357612982|gb|EHJ68260.1| hypothetical protein KGM_10626 [Danaus plexippus]
Length = 327
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 20 LRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
+RV D+S+HE+C++C CG LAH+C+TR KLYC+ DYD
Sbjct: 1 MRVGDLSWHEHCLSCCVCGCPLAHTCYTRNAKLYCKPDYD 40
>gi|157412000|gb|ABV54626.1| Lim homeobox protein 3 splice variant [Salmo salar]
Length = 379
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+V D +H C+ C +C LA CF+R + +YC+ D+ R
Sbjct: 12 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADKCFSRGDSVYCKEDFFKR 66
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLA---HSCFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA +++L C++DY++
Sbjct: 70 KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKADYETA 129
Query: 62 KK 63
K+
Sbjct: 130 KQ 131
>gi|211971017|ref|NP_001130018.1| LIM/homeobox protein Lhx3 [Salmo salar]
gi|157412002|gb|ABV54627.1| Lim homeobox protein 3 [Salmo salar]
Length = 395
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+V D +H C+ C +C LA CF+R + +YC+ D+ R
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADKCFSRGDSVYCKEDFFKR 82
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLA---HSCFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA +++L C++DY++
Sbjct: 86 KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKADYETA 145
Query: 62 KK 63
K+
Sbjct: 146 KQ 147
>gi|410903464|ref|XP_003965213.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 3 [Takifugu
rubripes]
Length = 390
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+V D +H C+ C +C LA CF+R + +YC+ D+ R
Sbjct: 19 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQAQLAEKCFSRGDSVYCKEDFFKR 73
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLA---HSCFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA +++L C++DY++
Sbjct: 77 KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKTDYETA 136
Query: 62 KK 63
K+
Sbjct: 137 KQ 138
>gi|126302627|ref|XP_001366305.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 2 [Monodelphis
domestica]
Length = 403
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+V D +H C+ C +C LA CF+R + +YC+ D+ R
Sbjct: 36 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTPLAEKCFSRGDGVYCKEDFFKR 90
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C +CV C LA +++L C++DY++
Sbjct: 94 KCAACQQGIPPTQVVRRAQDFVYHLHCFSCVVCKRQLATGDEFYLMEDSRLVCKADYETA 153
Query: 62 KK 63
K+
Sbjct: 154 KQ 155
>gi|410903462|ref|XP_003965212.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 2 [Takifugu
rubripes]
Length = 406
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+V D +H C+ C +C LA CF+R + +YC+ D+ R
Sbjct: 35 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQAQLAEKCFSRGDSVYCKEDFFKR 89
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLA---HSCFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA +++L C++DY++
Sbjct: 93 KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKTDYETA 152
Query: 62 KK 63
K+
Sbjct: 153 KQ 154
>gi|432856246|ref|XP_004068425.1| PREDICTED: LIM/homeobox protein Lhx4-like [Oryzias latipes]
Length = 389
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
+ + +C C + I D+++L+V D +H C+ C +C LA CF+R +YC+ D+
Sbjct: 25 LQQIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCQTPLADKCFSRAGSVYCKEDFFK 84
Query: 61 R 61
R
Sbjct: 85 R 85
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C SC + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 89 KCASCQQGIPPTQVVRKAQDFVYHLHCFACIMCSRQLATGDEFYLMEDGRLVCKVDYETA 148
Query: 62 KK 63
K+
Sbjct: 149 KQ 150
>gi|410903460|ref|XP_003965211.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 1 [Takifugu
rubripes]
Length = 399
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+V D +H C+ C +C LA CF+R + +YC+ D+ R
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQAQLAEKCFSRGDSVYCKEDFFKR 82
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLA---HSCFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA +++L C++DY++
Sbjct: 86 KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKTDYETA 145
Query: 62 KK 63
K+
Sbjct: 146 KQ 147
>gi|170032119|ref|XP_001843930.1| lim homeobox protein [Culex quinquefasciatus]
gi|167871879|gb|EDS35262.1| lim homeobox protein [Culex quinquefasciatus]
Length = 400
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 4 MKE-CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M+E C CG+ I DRY ++++ D +HE C+ C C L HSCFT+ K+YC+ DY
Sbjct: 13 MQEICEGCGQKIKDRYFMKISPDQYWHEQCLLCCICNIQLNHSCFTKNTKVYCKDDY 69
>gi|157134682|ref|XP_001663345.1| arrowhead [Aedes aegypti]
gi|108870378|gb|EAT34603.1| AAEL013168-PA, partial [Aedes aegypti]
Length = 306
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
++ C +CG PI+D+YLL V S+H C+ C C + L H SCF R+ ++YC++DY
Sbjct: 5 LRSCTACGEPISDKYLLDVGGCSWHSACLRCCICHNPLDHQPSCFLRDRQIYCKNDY 61
>gi|395506420|ref|XP_003757530.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Sarcophilus
harrisii]
Length = 403
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+V D +H C+ C +C LA CF+R + +YC+ D+ R
Sbjct: 36 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTPLAEKCFSRGDGVYCKEDFFKR 90
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C +CV C LA +++L C++DY++
Sbjct: 94 KCAACQQGIPPTQVVRRAQDFVYHLHCFSCVVCKRQLATGDEFYLMEDSRLVCKADYETA 153
Query: 62 KK 63
K+
Sbjct: 154 KQ 155
>gi|149058349|gb|EDM09506.1| LIM homeobox protein 4 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 376
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+ +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+ R
Sbjct: 13 IPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFKR 70
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 74 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 133
Query: 62 KK 63
K+
Sbjct: 134 KQ 135
>gi|348504222|ref|XP_003439661.1| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Oreochromis niloticus]
Length = 456
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C + I+DR+L+RV S+H+ C+ C C L +C+ R+ K YC+SDY
Sbjct: 32 CEGCAQIISDRFLMRVNGASWHQKCLQCAACQQPLTDTCYFRDTKPYCKSDY 83
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 6 ECGSC-GRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
EC +C G+ +++R D YH +C C C H L +E +L C++DY+ +
Sbjct: 90 ECSNCLGKIAPTEFVMRALDSVYHLSCFCCCVCQHQLCKGDEFVLKEGQLLCKTDYERER 149
>gi|2641222|gb|AAB86860.1| homeobox protein LIM-3 [Danio rerio]
Length = 374
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+V D +H C+ C +C LA CF+R + +YC+ D+ R
Sbjct: 4 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADKCFSRGDSVYCKDDFFKR 58
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLA---HSCFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA +++L C++DY++
Sbjct: 62 KCAACQQGIPPTQVVRRAQDFVYHLHCNACIVCKRQLATGDEYYLMEDSRLVCKADYETA 121
Query: 62 KK 63
K+
Sbjct: 122 KQ 123
>gi|380012090|ref|XP_003690122.1| PREDICTED: LIM/homeobox protein Lhx3-like [Apis florea]
Length = 465
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
++ +CG C I D+Y+LRV + +H C+ C +CG L CF R ++C+ D+ R
Sbjct: 89 SIPKCGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFFKR 147
>gi|348504454|ref|XP_003439776.1| PREDICTED: LIM/homeobox protein Lhx4-like [Oreochromis niloticus]
Length = 387
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
+ + +C C + I D+++L+V D +H C+ C +C LA CF+R +YC+ D+
Sbjct: 25 LQQIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCQTPLADKCFSRAGSVYCKEDFFK 84
Query: 61 R 61
R
Sbjct: 85 R 85
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C SC + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 89 KCASCQQGIPPTQVVRKAQDFVYHLHCFACIMCSRQLATGDEFYLMEDGRLVCKVDYEAA 148
Query: 62 KK 63
K+
Sbjct: 149 KQ 150
>gi|326924792|ref|XP_003208609.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx4-like
[Meleagris gallopavo]
Length = 384
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+ +C C + I D+++L+V D +H +C+ C +C LA CF R +YC+ D+ R
Sbjct: 24 IPQCAGCSQHILDKFILKVLDRHWHSSCLKCADCQMQLAERCFARAGSVYCKEDFFKR 81
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 85 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFYLMEDGRLVCKEDYETA 144
Query: 62 KK 63
K+
Sbjct: 145 KQ 146
>gi|158296021|ref|XP_316578.4| AGAP006540-PA [Anopheles gambiae str. PEST]
gi|157016312|gb|EAA11207.4| AGAP006540-PA [Anopheles gambiae str. PEST]
Length = 334
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDS 60
++ C +CG PI+D++LL V S+H C+ C C L H SCF RE ++YC++DY
Sbjct: 19 ELRSCTACGEPISDQFLLDVGGCSWHSACLRCCICHTPLDHQPSCFLRERQIYCKTDYTK 78
Query: 61 R 61
R
Sbjct: 79 R 79
>gi|118344350|ref|NP_001071998.1| transcription factor protein [Ciona intestinalis]
gi|70570117|dbj|BAE06539.1| transcription factor protein [Ciona intestinalis]
Length = 505
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C +PI D+Y + V S+HE CV C C L SCFT++ KLYC+ DY
Sbjct: 53 CAGCRQPIYDKYYMWVDQRSWHEECVQCSVCRRPLVESCFTKDCKLYCQQDY 104
>gi|18858975|ref|NP_571283.1| LIM/homeobox protein Lhx3 [Danio rerio]
gi|2497671|sp|Q90421.1|LHX3_DANRE RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox
protein 3; AltName: Full=Homeobox protein LIM-3
gi|1000342|gb|AAA76714.1| LIM homeobox protein [Danio rerio]
Length = 398
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+V D +H C+ C +C LA CF+R + +YC+ D+ R
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADKCFSRGDSVYCKDDFFKR 82
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLA---HSCFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA +++L C++DY++
Sbjct: 86 KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKADYETA 145
Query: 62 KK 63
K+
Sbjct: 146 KQ 147
>gi|126302625|ref|XP_001366249.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 1 [Monodelphis
domestica]
Length = 401
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+V D +H C+ C +C LA CF+R + +YC+ D+ R
Sbjct: 34 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTPLAEKCFSRGDGVYCKEDFFKR 88
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C +CV C LA +++L C++DY++
Sbjct: 92 KCAACQQGIPPTQVVRRAQDFVYHLHCFSCVVCKRQLATGDEFYLMEDSRLVCKADYETA 151
Query: 62 KK 63
K+
Sbjct: 152 KQ 153
>gi|444730493|gb|ELW70875.1| LIM/homeobox protein Lhx4 [Tupaia chinensis]
Length = 768
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
+ +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 149 IPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDF 203
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C ACV C LA + +L C+ DY++
Sbjct: 367 KCTACQQGIPPTQVVRKAQDFVYHLHCFACVICNRQLATGDEFYLMEDGRLVCKEDYETA 426
Query: 62 KK 63
K+
Sbjct: 427 KQ 428
>gi|383858395|ref|XP_003704687.1| PREDICTED: LIM/homeobox protein Lhx3-like [Megachile rotundata]
Length = 463
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
++ +CG C I D+Y+LRV + +H C+ C +CG L CF R ++C+ D+ R
Sbjct: 87 SIPKCGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFFKR 145
>gi|350418514|ref|XP_003491882.1| PREDICTED: LIM/homeobox protein Lhx3-like [Bombus impatiens]
Length = 463
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
++ +CG C I D+Y+LRV + +H C+ C +CG L CF R ++C+ D+ R
Sbjct: 87 SIPKCGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFFKR 145
>gi|328782955|ref|XP_394135.3| PREDICTED: LIM/homeobox protein Lhx3 [Apis mellifera]
Length = 442
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
++ +CG C I D+Y+LRV + +H C+ C +CG L CF R ++C+ D+ R
Sbjct: 87 SIPKCGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFFKR 145
>gi|242011200|ref|XP_002426343.1| LIM/homeobox protein Lhx4, putative [Pediculus humanus corporis]
gi|212510420|gb|EEB13605.1| LIM/homeobox protein Lhx4, putative [Pediculus humanus corporis]
Length = 366
Score = 58.5 bits (140), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
++ +CG C I DR++L+V D ++H C+ C +CG L CF R ++YC+ D+ R
Sbjct: 20 SIPKCGGCQELILDRFILKVLDRTWHAKCLNCNDCGGPLTDKCFARNGQVYCKDDFFKR 78
>gi|386769869|ref|NP_001246087.1| Lim3, isoform E [Drosophila melanogaster]
gi|383291572|gb|AFH03761.1| Lim3, isoform E [Drosophila melanogaster]
Length = 405
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +CG C I DR++L+V + ++H C+ C EC L CF R +L+C+ D+
Sbjct: 1 MATIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFK 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|241174222|ref|XP_002410980.1| lim homeobox protein, putative [Ixodes scapularis]
gi|215495067|gb|EEC04708.1| lim homeobox protein, putative [Ixodes scapularis]
Length = 62
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
M + C +CG I DR+LL+V+D S+H C+ C C L H SCF R +YCR DY
Sbjct: 1 MTEQEACSACGELIADRFLLKVSDTSWHARCLRCCVCQTPLDHQPSCFVRHGSVYCRPDY 60
>gi|171916111|ref|NP_001116445.1| LIM/homeobox protein Lhx4 [Danio rerio]
Length = 391
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
+ + +C C + I D+++L+V D +H C+ C +C LA CF+R +YC+ D+
Sbjct: 27 LQQIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCHALLADKCFSRAGNVYCKEDFFK 86
Query: 61 R 61
R
Sbjct: 87 R 87
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C SC + I ++R A D YH +C ACV C LA + +L C+ DY++
Sbjct: 91 KCASCQQGIPPTQVVRKAQDFVYHLHCFACVMCSRQLATGDEFYLMEDGRLVCKEDYETA 150
Query: 62 KK 63
K+
Sbjct: 151 KQ 152
>gi|49659006|emb|CAD37944.1| homeobox protein LHX [Suberites domuncula]
Length = 342
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
N+ C C PI DR++L+V D +H C+ CV+C L C++R+ +++C++D+ R
Sbjct: 115 NIPCCAGCHHPIVDRFILKVLDKPWHSKCLRCVDCDMLLTDKCYSRDGEVFCKADFSRR 173
>gi|395506422|ref|XP_003757531.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Sarcophilus
harrisii]
Length = 401
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+V D +H C+ C +C LA CF+R + +YC+ D+ R
Sbjct: 34 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTPLAEKCFSRGDGVYCKEDFFKR 88
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C +CV C LA +++L C++DY++
Sbjct: 92 KCAACQQGIPPTQVVRRAQDFVYHLHCFSCVVCKRQLATGDEFYLMEDSRLVCKADYETA 151
Query: 62 KK 63
K+
Sbjct: 152 KQ 153
>gi|190336903|gb|AAI62627.1| LIM homeobox 3 [Danio rerio]
Length = 398
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+V D +H C+ C +C LA CF+R + +YC+ D+ R
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADKCFSRGDSVYCKDDFFKR 82
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLA---HSCFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA +++L C++DY++
Sbjct: 86 KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKADYETA 145
Query: 62 KK 63
K+
Sbjct: 146 KQ 147
>gi|345493999|ref|XP_001603795.2| PREDICTED: LIM/homeobox protein Lhx3-like [Nasonia vitripennis]
Length = 450
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTREN-KLYCRSDYDSR 61
++ +CG C I DRY+LRV D +H C+ C +CG L C+ R N ++C+ D+ R
Sbjct: 51 SIPKCGGCQEAILDRYVLRVMDRCWHAGCLTCRDCGVRLTDKCYARNNGHVFCKDDFFKR 110
>gi|70570020|dbj|BAE06522.1| transcription factor protein [Ciona intestinalis]
Length = 402
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG PI D+Y+LRVA ++ +H C+ C +CG L +CF R+ K YC+ DY
Sbjct: 40 CVGCGSPIHDQYILRVAPNLEWHAGCLKCADCGQYLDETCTCFVRDGKTYCKRDY 94
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+C CG + + +++R D YH C CV C L R++ L+C++D++
Sbjct: 101 KCNKCGLCFSKNDFVMRARDKIYHIQCFKCVACSRQLIPGDEFALRDDGLFCKADHEVAT 160
Query: 63 KGSQLV 68
G +V
Sbjct: 161 SGDMMV 166
>gi|321454678|gb|EFX65839.1| hypothetical protein DAPPUDRAFT_65174 [Daphnia pulex]
Length = 291
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
CG CG ITDRY L + ++H C+ C EC L A SCF+R++++YCR DY
Sbjct: 18 CGGCGFKITDRYYLVAVERAWHSECLRCGECRRPLDTALSCFSRQSRIYCRDDY 71
>gi|391327822|ref|XP_003738394.1| PREDICTED: LIM/homeobox protein Lhx3-like [Metaseiulus
occidentalis]
Length = 408
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+ +C CG I DR++L+V + +H C+ C +C LA+ CF R LYC+ D+ R
Sbjct: 51 IPKCAGCGDIILDRFILKVLERPWHSKCLKCSDCQAPLANKCFARAGHLYCKDDFFKR 108
>gi|339252326|ref|XP_003371386.1| LIM/homeobox protein Lhx1 [Trichinella spiralis]
gi|316968365|gb|EFV52646.1| LIM/homeobox protein Lhx1 [Trichinella spiralis]
Length = 309
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
NM C C +PI DRYL V D S+H +C+ C C L CFTR+ ++C++D+ R
Sbjct: 8 NMTLCAGCKKPIYDRYLYHVMDKSWHGSCIVCEVCQTPLDDRCFTRDGLIFCKTDFLKR 66
>gi|410921498|ref|XP_003974220.1| PREDICTED: LIM/homeobox protein Lhx4-like [Takifugu rubripes]
Length = 389
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
+ + +C C + I D+++L+V D +H C+ C +C LA CF+R +YC+ D+
Sbjct: 25 LQQIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCQTPLADKCFSRAGSVYCKEDFFK 84
Query: 61 R 61
R
Sbjct: 85 R 85
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C SC + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 89 KCASCQQGIPPMQVVRKAQDFVYHLHCFACIMCSRQLATGDEFYLMEDGRLVCKVDYEAA 148
Query: 62 KK 63
K+
Sbjct: 149 KQ 150
>gi|70887599|ref|NP_001020669.1| LIM homeobox transcription factor 1, alpha [Danio rerio]
Length = 366
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 29/52 (55%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C I DRYLLRV D +HE C+ C C L +CF R LYC+ DY
Sbjct: 26 CEGCNELIRDRYLLRVQDGLWHERCLHCASCREPLKDTCFLRNKTLYCKRDY 77
>gi|299115102|dbj|BAJ09782.1| apterous 1 [Daphnia magna]
Length = 468
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
CG CG ITDRY L + ++H C+ C EC L A SCF+R++++YCR DY
Sbjct: 7 CGGCGFKITDRYYLVAVERAWHSECLRCGECRRPLDTALSCFSRQSRIYCRDDY 60
>gi|449509307|ref|XP_002191188.2| PREDICTED: LIM/homeobox protein Lhx4-like, partial [Taeniopygia
guttata]
Length = 412
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+ +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+ R
Sbjct: 44 IPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLAERCFSRAGSVYCKEDFFKR 101
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 105 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFYLMEDGRLVCKEDYETA 164
Query: 62 KK 63
K+
Sbjct: 165 KQ 166
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 284 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFYLMEDGRLVCKEDYETA 343
Query: 62 KK 63
K+
Sbjct: 344 KQ 345
>gi|256073008|ref|XP_002572825.1| arrowhead [Schistosoma mansoni]
gi|360042902|emb|CCD78312.1| putative lim homeobox protein [Schistosoma mansoni]
Length = 418
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
N+ C C I D+Y + D+++H+NC+ C +CG L C+T++ LYCR D+
Sbjct: 125 NLLRCNECQSIIFDQYYHSIDDLTWHQNCLRCFDCGFVLTERCYTKDGHLYCREDF 180
>gi|371573886|gb|AEX38313.1| Lhx3 [Mnemiopsis leidyi]
Length = 507
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C +PITDR++L+V + ++H C+ C +C L CF+R + +YC+ D+ R
Sbjct: 126 CAGCDQPITDRFILKVMEKNWHSACLKCHDCLAQLTDKCFSRGDFVYCKDDFYKR 180
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 15/109 (13%)
Query: 6 ECGSCGRPITDRYLLRVADIS-YHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C C + I ++R A +H +C C+ C +L F +N+L CRSDYD+
Sbjct: 184 KCAKCEKVIPPSQVVRRAGGHVFHMDCFVCIICSRTLNTGDEFYFVDDNQLVCRSDYDN- 242
Query: 62 KKGSQLVTVLFYSMYVHSVMKFHTITLPLHTITIRIQVTIIIIRNLSSL 110
F + Y + + T L L I+ T I + L +L
Sbjct: 243 ----------FKTQYANCTDETFTDELDLENQGIKRPRTTITAKQLETL 281
>gi|395530909|ref|XP_003767529.1| PREDICTED: uncharacterized protein LOC100914829 [Sarcophilus
harrisii]
Length = 659
Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
+ + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 34 LTEIPQCAGCNQHILDKFILKVLDRHWHGSCLKCADCQMQLADRCFSRAGSVYCKEDF 91
>gi|56694836|gb|AAW23080.1| Lim3 [Oikopleura dioica]
Length = 289
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 7 CGSCGRPITDRYLLRVADI-SYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SC RPI DRY+ +V SYH++C+ C++CG L+ CF ++++L CR D+ R
Sbjct: 40 CSSCCRPILDRYVFQVGPYQSYHQHCLKCLDCGLQLSEKCFFKDDQLLCRVDFYKR 95
>gi|380029439|ref|XP_003698380.1| PREDICTED: uncharacterized protein LOC100872944 [Apis florea]
Length = 478
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLA---HSCFTRENKLYCRSDY 58
+++C CG I +R+LL D +H C+ C CG +LA HSC+TR + C+SDY
Sbjct: 252 IQQCAGCGGQIVERWLLLAMDRYWHNGCLKCSYCGAALAEIGHSCYTRSGMILCKSDY 309
>gi|345325463|ref|XP_003430923.1| PREDICTED: hypothetical protein LOC100085508 [Ornithorhynchus
anatinus]
Length = 884
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+ +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+ R
Sbjct: 577 IPQCAGCNQHILDKFILKVLDRHWHGSCLKCADCQMQLADRCFSRAGSVYCKEDFFKR 634
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 638 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 697
Query: 62 KK 63
K+
Sbjct: 698 KQ 699
>gi|209489466|gb|ACI49225.1| hypothetical protein Csp3_JD05.010 [Caenorhabditis angaria]
Length = 344
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSRKK 63
M EC +C RPI DRY+ V +H+ C+ C +C + +CF+R+ + C++D+ SR+
Sbjct: 1 MSECAACARPILDRYVFTVLGKCWHQECLRCSDCAAPMTMTCFSRDGLILCKNDF-SRRY 59
Query: 64 GSQ 66
G +
Sbjct: 60 GQR 62
>gi|328781883|ref|XP_396576.4| PREDICTED: hypothetical protein LOC413125, partial [Apis mellifera]
Length = 417
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLA---HSCFTRENKLYCRSDY 58
+++C CG I +R+LL D +H C+ C CG +LA HSC+TR + C+SDY
Sbjct: 190 IQQCAGCGGQIVERWLLLAMDRYWHNGCLKCSYCGAALAEIGHSCYTRSGMILCKSDY 247
>gi|313234650|emb|CBY10605.1| unnamed protein product [Oikopleura dioica]
Length = 289
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 7 CGSCGRPITDRYLLRVADI-SYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SC RPI DRY+ +V SYH++C+ C++CG L+ CF ++++L CR D+ R
Sbjct: 40 CSSCCRPILDRYVFQVGPYQSYHQHCLKCLDCGLQLSEKCFFKDDQLLCRVDFYKR 95
>gi|25453086|sp|O97581.1|LHX3_PIG RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox
protein 3; AltName: Full=Homeobox protein LIM-3;
AltName: Full=Homeobox protein P-LIM
gi|4091889|gb|AAC99331.1| LIM homeodomain transcription factor [Sus scrofa]
Length = 383
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R LYC+ D+ R
Sbjct: 16 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESLYCKDDFFKR 70
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 74 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 132
Query: 61 RKK 63
K+
Sbjct: 133 AKQ 135
>gi|326205258|dbj|BAJ84011.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 386
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
P + C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 15 PEIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFKR 74
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 78 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 136
Query: 61 RKK 63
K+
Sbjct: 137 AKQ 139
>gi|47220024|emb|CAG12172.1| unnamed protein product [Tetraodon nigroviridis]
Length = 53
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C PI DR+LLRV + S+HE CV C C +L +C+ R+ LYC+ DY+
Sbjct: 1 CAGCEAPIADRFLLRVNERSWHETCVKCAVCLSALTGTCYCRDRLLYCKHDYE 53
>gi|110751065|ref|XP_001120755.1| PREDICTED: LIM domain only protein 3-like [Apis mellifera]
Length = 249
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRSDY 58
EC CG+PIT+RYLL+ D+ +HE+C+ C C L S FTR N + C+ DY
Sbjct: 19 ECAGCGKPITERYLLKAMDLFWHEDCLKCGCCDCRLGEVGSSLFTRANLILCKRDY 74
>gi|259013380|ref|NP_001158395.1| lim domain homeobox 3/4 transcription factor [Saccoglossus
kowalevskii]
gi|90659991|gb|ABD97272.1| lim domain homeobox 3/4 transcription factor [Saccoglossus
kowalevskii]
Length = 390
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+C C PI DR++L+V D ++H C+ C +C L+ C++R ++YC+ D+ R
Sbjct: 34 KCSGCEHPILDRFILKVQDRAWHSKCLKCTDCQAQLSDKCYSRGGQVYCKEDFFKR 89
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH C ACV C LA +NKL C+ DY++
Sbjct: 93 KCSACDQGIPPTQVVRRAQDNVYHLQCFACVMCNRQLATGDEFYLMNDNKLVCKGDYEAA 152
Query: 62 K 62
K
Sbjct: 153 K 153
>gi|380027052|ref|XP_003697250.1| PREDICTED: LIM/homeobox protein Lhx9-like [Apis florea]
Length = 390
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
CG CGR I +R+ LR AD ++H C+ C C LA +CF R+ +YC+ DY
Sbjct: 38 CGGCGREIAERWYLRAADRAWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDY 91
>gi|328787166|ref|XP_003250891.1| PREDICTED: LIM/homeobox protein Lhx9-like [Apis mellifera]
Length = 390
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
CG CGR I +R+ LR AD ++H C+ C C LA +CF R+ +YC+ DY
Sbjct: 38 CGGCGREIAERWYLRAADRAWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDY 91
>gi|397492168|ref|XP_003817000.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Pan paniscus]
Length = 390
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
P + C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 15 PEIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFRR 74
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 78 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 136
Query: 61 RKKGSQ 66
K+ Q
Sbjct: 137 AKQRGQ 142
>gi|344308352|ref|XP_003422841.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Loxodonta
africana]
Length = 403
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YCR D+ R
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCREDFFRR 90
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 94 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 152
Query: 61 RKK 63
K+
Sbjct: 153 AKQ 155
>gi|74096249|ref|NP_001027767.1| LIM homeodomain protein [Ciona intestinalis]
gi|3150146|emb|CAA06919.1| LIM homeodomain protein [Ciona intestinalis]
Length = 381
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG PI D+Y+LRVA ++ +H C+ C +CG L +CF R+ K YC+ DY
Sbjct: 19 CVGCGSPIHDQYILRVAPNLEWHAGCLKCADCGQYLDETCTCFVRDGKTYCKRDY 73
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+C CG + + +++R D YH C CV C L R++ L+C++D++
Sbjct: 80 KCNKCGLCFSKNDFVMRARDKIYHIQCFKCVACSRQLIPGDEFALRDDGLFCKADHEVAT 139
Query: 63 KGSQLV 68
G +V
Sbjct: 140 SGDMMV 145
>gi|334321803|ref|XP_001374523.2| PREDICTED: LIM/homeobox protein Lhx4-like [Monodelphis domestica]
Length = 391
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+ +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+ R
Sbjct: 28 IPQCAGCNQHILDKFILKVLDRHWHGSCLKCADCQMQLADRCFSRAGSVYCKEDFFKR 85
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 89 KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETA 148
Query: 62 KK 63
K+
Sbjct: 149 KQ 150
>gi|383850874|ref|XP_003700999.1| PREDICTED: LIM/homeobox protein Lhx9-like [Megachile rotundata]
Length = 391
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
CG CGR I +R+ LR AD ++H C+ C C LA +CF R+ +YC+ DY
Sbjct: 38 CGGCGREIAERWYLRAADRAWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDY 91
>gi|780314|gb|AAA73902.1| PLim [Mus musculus]
Length = 400
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
P + C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 29 PEIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRRESVYCKDDFFKR 88
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 92 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 150
Query: 61 RKK 63
K+
Sbjct: 151 AKQ 153
>gi|332833327|ref|XP_003312450.1| PREDICTED: LIM/homeobox protein Lhx3 [Pan troglodytes]
Length = 396
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
P + C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 25 PEIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFRR 84
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 88 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 146
Query: 61 RKK 63
K+
Sbjct: 147 AKQ 149
>gi|322793254|gb|EFZ16911.1| hypothetical protein SINV_14186 [Solenopsis invicta]
Length = 392
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+ +CG C I D+Y+LRV + +H C+ C +CG L CF R ++C+ D+ R
Sbjct: 3 IPKCGGCQEVILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFFKR 60
>gi|47218680|emb|CAG12404.1| unnamed protein product [Tetraodon nigroviridis]
Length = 444
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+V + +H C+ C +C LA CF+R + +YC+ D+ R
Sbjct: 5 CAGCNQHIVDRFILKVLERHWHSKCLKCSDCQAQLAEKCFSRGDSVYCKEDFFKR 59
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLA---HSCFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C AC+ C LA +++L C++DY++
Sbjct: 63 KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKTDYETA 122
Query: 62 KK 63
K+
Sbjct: 123 KQ 124
>gi|344308350|ref|XP_003422840.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Loxodonta
africana]
Length = 401
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YCR D+ R
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCREDFFRR 88
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 92 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 150
Query: 61 RKK 63
K+
Sbjct: 151 AKQ 153
>gi|443690540|gb|ELT92649.1| hypothetical protein CAPTEDRAFT_219057 [Capitella teleta]
Length = 432
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG ITD+Y+LRVA D+ +H +C+ C +C L S CF R+ K YC+ DY
Sbjct: 17 CVGCGSQITDQYILRVAPDLEWHASCLRCTDCNQYLDESCTCFVRDGKTYCKRDY 71
>gi|194759358|ref|XP_001961916.1| GF15212 [Drosophila ananassae]
gi|190615613|gb|EDV31137.1| GF15212 [Drosophila ananassae]
Length = 444
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
+ + +CG C I DR++L+V + ++H C+ C EC L CF R +L+C+ D+
Sbjct: 36 LSTIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFK 95
Query: 61 R 61
R
Sbjct: 96 R 96
>gi|195484367|ref|XP_002090664.1| GE12672 [Drosophila yakuba]
gi|194176765|gb|EDW90376.1| GE12672 [Drosophila yakuba]
Length = 442
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
+ + +CG C I DR++L+V + ++H C+ C EC L CF R +L+C+ D+
Sbjct: 36 LSTIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFK 95
Query: 61 R 61
R
Sbjct: 96 R 96
>gi|18308156|gb|AAL67847.1|AF461699_1 LIM homeobox protein [Gallus gallus]
Length = 214
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
P + C C + I DR++L+V D +H C+ C +C LA CF+R + +YC+ D+ R
Sbjct: 23 PEIPLCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFSRGDGVYCKEDFFKR 82
>gi|332018435|gb|EGI59029.1| LIM/homeobox protein Lhx3 [Acromyrmex echinatior]
Length = 467
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+ +CG C I D+Y+LRV + +H C+ C +CG L CF R ++C+ D+ R
Sbjct: 84 IPKCGGCQEVILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFFKR 141
>gi|293345789|ref|XP_002726117.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Rattus
norvegicus]
gi|293357702|ref|XP_002729190.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Rattus
norvegicus]
gi|149039301|gb|EDL93521.1| rCG45383, isoform CRA_a [Rattus norvegicus]
Length = 400
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
P + C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 29 PEIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKR 88
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 92 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 150
Query: 61 RKK 63
K+
Sbjct: 151 AKQ 153
>gi|194879752|ref|XP_001974294.1| GG21652 [Drosophila erecta]
gi|190657481|gb|EDV54694.1| GG21652 [Drosophila erecta]
Length = 442
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
+ + +CG C I DR++L+V + ++H C+ C EC L CF R +L+C+ D+
Sbjct: 36 LSTIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFK 95
Query: 61 R 61
R
Sbjct: 96 R 96
>gi|4106560|gb|AAD02889.1| LIM homeodomain transcription factor [Drosophila melanogaster]
Length = 440
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
+ + +CG C I DR++L+V + ++H C+ C EC L CF R +L+C+ D+
Sbjct: 36 LSTIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFK 95
Query: 61 R 61
R
Sbjct: 96 R 96
>gi|17136270|ref|NP_476606.1| Lim3, isoform A [Drosophila melanogaster]
gi|7298537|gb|AAF53756.1| Lim3, isoform A [Drosophila melanogaster]
Length = 440
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
+ + +CG C I DR++L+V + ++H C+ C EC L CF R +L+C+ D+
Sbjct: 36 LSTIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFK 95
Query: 61 R 61
R
Sbjct: 96 R 96
>gi|195580083|ref|XP_002079885.1| GD21780 [Drosophila simulans]
gi|194191894|gb|EDX05470.1| GD21780 [Drosophila simulans]
Length = 438
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
+ + +CG C I DR++L+V + ++H C+ C EC L CF R +L+C+ D+
Sbjct: 36 LSTIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFK 95
Query: 61 R 61
R
Sbjct: 96 R 96
>gi|350396214|ref|XP_003484481.1| PREDICTED: LIM/homeobox protein Lhx9-like [Bombus impatiens]
Length = 417
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLA---HSCFTRENKLYCRSDY 58
+++C CG I +R+LL D +H C+ C CG +LA HSC+TR + C+SDY
Sbjct: 191 IQQCAGCGGQIVERWLLLAMDRYWHNGCLKCSYCGAALAEIGHSCYTRSGMILCKSDY 248
>gi|170048224|ref|XP_001870661.1| lim homeobox protein [Culex quinquefasciatus]
gi|167870355|gb|EDS33738.1| lim homeobox protein [Culex quinquefasciatus]
Length = 189
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 5 KECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
++C CG PI DRY L VAD ++H C+ C +C +L SC+ RE +YC+ DY
Sbjct: 79 EKCAGCGIPIRDRYYLLVADRAWHNQCLRCCKCLANLETELSCYAREGNIYCKDDY 134
>gi|148676344|gb|EDL08291.1| mCG18748, isoform CRA_a [Mus musculus]
Length = 400
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
P + C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 29 PEIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKR 88
Score = 38.5 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 92 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 150
Query: 61 RKK 63
K+
Sbjct: 151 AKQ 153
>gi|340376253|ref|XP_003386648.1| PREDICTED: LIM/homeobox protein Lhx3-like [Amphimedon
queenslandica]
Length = 338
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C I DR++LRV D S+H C+ C +C L+ C++R ++YC+ D+ R
Sbjct: 93 CAGCNTRIFDRFILRVQDKSWHAKCLRCSDCQCQLSDKCYSRSGQVYCKDDFSKR 147
>gi|45383844|ref|NP_989462.1| LIM domain kinase 1 [Gallus gallus]
gi|82104583|sp|Q8QFP8.1|LIMK1_CHICK RecName: Full=LIM domain kinase 1; Short=LIMK-1; Short=chLIMK1
gi|19912219|dbj|BAB88398.1| LIM kinase 1 [Gallus gallus]
Length = 662
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
++ C SCG+ I D L+ + +H +C C ECG SL+H + ++ +LYC+ DY +R
Sbjct: 22 DLPVCASCGQGIFDGQYLQALNADWHADCFRCGECGASLSHQYYEKDGRLYCKKDYWAR 80
>gi|1708829|sp|P50481.1|LHX3_MOUSE RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox
protein 3; AltName: Full=Homeobox protein LIM-3;
AltName: Full=Homeobox protein P-LIM
gi|575517|gb|AAA62369.1| LIM-homeoprotein [Mus musculus]
gi|187956241|gb|AAI50690.1| Lhx3 protein [Mus musculus]
Length = 400
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
P + C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 29 PEIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKR 88
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 92 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 150
Query: 61 RKK 63
K+
Sbjct: 151 AKQ 153
>gi|348533440|ref|XP_003454213.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oreochromis niloticus]
Length = 392
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
+C SCG I DRYLL+V ++++H C+ C C SL SC+ + ++YC+ DY SR
Sbjct: 113 QCASCGMEIHDRYLLKVNNLNWHLGCLECSVCRASLRQHSSCYVKNKEIYCKLDYFSR 170
>gi|308235933|ref|NP_001184116.1| LIM/homeobox protein Lhx3 [Canis lupus familiaris]
gi|300837161|gb|ADK38612.1| LIM homeodomain protein 3 isoform LHX3b [Canis lupus familiaris]
Length = 403
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCTDCHTPLAERCFSRGESVYCKDDFFKR 90
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 94 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 152
Query: 61 RKK 63
K+
Sbjct: 153 AKQ 155
>gi|442630038|ref|NP_001261380.1| arrowhead, isoform D [Drosophila melanogaster]
gi|440215264|gb|AGB94075.1| arrowhead, isoform D [Drosophila melanogaster]
Length = 271
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
++ C +CG PI+DR+ L V S+H +C+ C C L SCF RE ++YC++DY
Sbjct: 4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY 61
>gi|167859587|gb|ACA04748.1| Lim3 [Amphimedon queenslandica]
Length = 338
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C I DR++LRV D S+H C+ C +C L+ C++R ++YC+ D+ R
Sbjct: 93 CAGCNTRIFDRFILRVQDKSWHAKCLRCSDCQCQLSDKCYSRSGQVYCKDDFSKR 147
>gi|189237525|ref|XP_973330.2| PREDICTED: similar to lim homeobox protein [Tribolium castaneum]
Length = 448
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+CG C I DR++L+VAD ++H C+ C +C L CF R +L+C+ D+ R
Sbjct: 100 KCGGCHELILDRFILKVADRTWHAKCLQCSDCRIQLTDKCFARNGQLFCKEDFFKR 155
>gi|339961229|pdb|3MMK|A Chain A, The Structural Basis For Partial Redundancy In A Class
Of Transcription Factors, The Lim-Homeodomain Proteins,
In Neural Cell Type Specification
gi|339961230|pdb|3MMK|B Chain B, The Structural Basis For Partial Redundancy In A Class
Of Transcription Factors, The Lim-Homeodomain Proteins,
In Neural Cell Type Specification
Length = 169
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 3 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 62
Query: 61 R 61
R
Sbjct: 63 R 63
>gi|194749355|ref|XP_001957104.1| GF24228 [Drosophila ananassae]
gi|190624386|gb|EDV39910.1| GF24228 [Drosophila ananassae]
Length = 275
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
++ C +CG PI+DR+ L V S+H +C+ C C L SCF RE ++YC++DY
Sbjct: 4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY 61
>gi|17945534|gb|AAL48819.1| RE24382p [Drosophila melanogaster]
Length = 275
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
++ C +CG PI+DR+ L V S+H +C+ C C L SCF RE ++YC++DY
Sbjct: 4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY 61
>gi|24656992|ref|NP_728906.1| arrowhead, isoform B [Drosophila melanogaster]
gi|194866170|ref|XP_001971791.1| GG15164 [Drosophila erecta]
gi|195491511|ref|XP_002093592.1| GE21383 [Drosophila yakuba]
gi|62510367|sp|Q8IRC7.1|AWH_DROME RecName: Full=LIM/homeobox protein Awh; AltName: Full=Protein
arrowhead
gi|23092944|gb|AAN11572.1| arrowhead, isoform B [Drosophila melanogaster]
gi|94400621|gb|ABF17921.1| FI01007p [Drosophila melanogaster]
gi|190653574|gb|EDV50817.1| GG15164 [Drosophila erecta]
gi|194179693|gb|EDW93304.1| GE21383 [Drosophila yakuba]
Length = 275
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
++ C +CG PI+DR+ L V S+H +C+ C C L SCF RE ++YC++DY
Sbjct: 4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY 61
>gi|270007707|gb|EFA04155.1| hypothetical protein TcasGA2_TC014400 [Tribolium castaneum]
Length = 415
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+ +CG C I DR++L+VAD ++H C+ C +C L CF R +L+C+ D+ R
Sbjct: 65 IPKCGGCHELILDRFILKVADRTWHAKCLQCSDCRIQLTDKCFARNGQLFCKEDFFKR 122
>gi|443694945|gb|ELT95963.1| hypothetical protein CAPTEDRAFT_167213 [Capitella teleta]
Length = 352
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 31/53 (58%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C CG I DRYLLRV S+HE C+ C C L SCF + +L C+ DYD
Sbjct: 15 CCGCGLTIEDRYLLRVMGNSWHERCLQCDFCRAPLTRSCFVKNGRLLCKLDYD 67
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 7 CGSCGRPI-TDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYD 59
C +C + + ++ ++R +H C CV CGH L ++ +L+CR+D++
Sbjct: 74 CSACVQTVPSNELVMRAVGHVFHLQCFVCVACGHQLQRGDQFVVKDGQLFCRADFE 129
>gi|24656997|ref|NP_523907.2| arrowhead, isoform A [Drosophila melanogaster]
gi|23092945|gb|AAF47800.2| arrowhead, isoform A [Drosophila melanogaster]
Length = 214
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
++ C +CG PI+DR+ L V S+H +C+ C C L SCF RE ++YC++DY
Sbjct: 4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY 61
>gi|195337236|ref|XP_002035235.1| GM14592 [Drosophila sechellia]
gi|194128328|gb|EDW50371.1| GM14592 [Drosophila sechellia]
Length = 275
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
++ C +CG PI+DR+ L V S+H +C+ C C L SCF RE ++YC++DY
Sbjct: 4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY 61
>gi|195161060|ref|XP_002021388.1| GL25299 [Drosophila persimilis]
gi|198465223|ref|XP_001353549.2| GA10520 [Drosophila pseudoobscura pseudoobscura]
gi|194118501|gb|EDW40544.1| GL25299 [Drosophila persimilis]
gi|198150064|gb|EAL31062.2| GA10520 [Drosophila pseudoobscura pseudoobscura]
Length = 275
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
++ C +CG PI+DR+ L V S+H +C+ C C L SCF RE ++YC++DY
Sbjct: 4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY 61
>gi|442630036|ref|NP_001261379.1| arrowhead, isoform C [Drosophila melanogaster]
gi|440215263|gb|AGB94074.1| arrowhead, isoform C [Drosophila melanogaster]
Length = 287
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
++ C +CG PI+DR+ L V S+H +C+ C C L SCF RE ++YC++DY
Sbjct: 4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY 61
>gi|28316900|gb|AAO39472.1| RE70568p [Drosophila melanogaster]
Length = 523
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY--DSR 61
+ +CG C I DR++L+V + ++H C+ C EC L CF R +L+C+ D+ +R
Sbjct: 119 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKSNR 178
Query: 62 KKGSQ 66
+ G++
Sbjct: 179 RYGTK 183
>gi|2435404|gb|AAB71337.1| arrowhead [Drosophila melanogaster]
Length = 214
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
++ C +CG PI+DR+ L V S+H +C+ C C L SCF RE ++YC++DY
Sbjct: 4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY 61
>gi|195587560|ref|XP_002083529.1| GD13784 [Drosophila simulans]
gi|194195538|gb|EDX09114.1| GD13784 [Drosophila simulans]
Length = 278
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
++ C +CG PI+DR+ L V S+H +C+ C C L SCF RE ++YC++DY
Sbjct: 5 LRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY 61
>gi|123981310|gb|ABM82484.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [synthetic
construct]
Length = 349
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I DRY+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDRYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
>gi|345802215|ref|XP_547330.3| PREDICTED: LIM/homeobox protein Lhx8 [Canis lupus familiaris]
Length = 462
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYD 59
P C SCGR I D+YLL+V D+ +H C++C C SL SC+ ++ ++C+ DY
Sbjct: 186 PGKCVCNSCGREIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYF 245
Query: 60 SR 61
R
Sbjct: 246 RR 247
>gi|442628307|ref|NP_001260559.1| Lim3, isoform G [Drosophila melanogaster]
gi|440213916|gb|AGB93094.1| Lim3, isoform G [Drosophila melanogaster]
Length = 555
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+ +CG C I DR++L+V + ++H C+ C EC L CF R +L+C+ D+ R
Sbjct: 119 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKR 176
>gi|24585132|ref|NP_724161.1| Lim3, isoform B [Drosophila melanogaster]
gi|386769865|ref|NP_001246085.1| Lim3, isoform C [Drosophila melanogaster]
gi|386769867|ref|NP_001246086.1| Lim3, isoform D [Drosophila melanogaster]
gi|386769871|ref|NP_001246088.1| Lim3, isoform F [Drosophila melanogaster]
gi|22946804|gb|AAF53758.2| Lim3, isoform B [Drosophila melanogaster]
gi|124248338|gb|ABM92789.1| FI01025p [Drosophila melanogaster]
gi|383291570|gb|AFH03759.1| Lim3, isoform C [Drosophila melanogaster]
gi|383291571|gb|AFH03760.1| Lim3, isoform D [Drosophila melanogaster]
gi|383291573|gb|AFH03762.1| Lim3, isoform F [Drosophila melanogaster]
Length = 520
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+ +CG C I DR++L+V + ++H C+ C EC L CF R +L+C+ D+ R
Sbjct: 119 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKR 176
>gi|345487079|ref|XP_001599685.2| PREDICTED: LIM/homeobox protein Lhx9-like [Nasonia vitripennis]
Length = 406
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
CG CGR I +R+ LR AD +H C+ C C LA +CF R+ +YC+ DY
Sbjct: 46 CGGCGREIAERWYLRAADRPWHCGCLRCCHCRLPLAAELTCFARDGNIYCKEDY 99
>gi|195345019|ref|XP_002039073.1| GM17030 [Drosophila sechellia]
gi|194134203|gb|EDW55719.1| GM17030 [Drosophila sechellia]
Length = 523
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+ +CG C I DR++L+V + ++H C+ C EC L CF R +L+C+ D+ R
Sbjct: 124 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKR 181
>gi|126314544|ref|XP_001379553.1| PREDICTED: LIM domain kinase 1 [Monodelphis domestica]
Length = 682
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
++ C SCG+ I D L+ + +H +C C ECG SL+H + ++ +LYC+ DY +R
Sbjct: 22 DLPVCSSCGQSIYDGQYLQALNADWHSDCFRCCECGASLSHQYYEKDGQLYCKKDYWAR 80
>gi|312374311|gb|EFR21889.1| hypothetical protein AND_16082 [Anopheles darlingi]
Length = 568
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+CG C I DR++L+V+D ++H C+ C EC L CF R +L+C+ D+ R
Sbjct: 174 KCGGCHELILDRFILKVSDRTWHAKCLQCSECRVQLNEKCFARNGQLFCKDDFFKR 229
>gi|71985875|ref|NP_001023111.1| Protein MEC-3, isoform a [Caenorhabditis elegans]
gi|462587|sp|P09088.2|MEC3_CAEEL RecName: Full=Mechanosensory protein 3
gi|156489|gb|AAA50614.1| homeoprotein [Caenorhabditis elegans]
gi|14530395|emb|CAB02885.3| Protein MEC-3, isoform a [Caenorhabditis elegans]
Length = 321
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
N +C C I DRY+ R+ + SYHENCV C C LA CF + ++YC Y
Sbjct: 25 NQNKCNCCNEQIYDRYIYRMDNRSYHENCVKCTICESPLAEKCFWKNGRIYCSQHY 80
>gi|84490413|ref|NP_001033709.1| LIM/homeobox protein Lhx3 [Bos taurus]
gi|62952823|gb|AAY23167.1| LIM homeodomain 3 protein b isoform [Bos taurus]
gi|62952825|gb|AAY23168.1| LIM homeodomain 3 protein b isoform [Bos taurus]
gi|296482071|tpg|DAA24186.1| TPA: LIM homeobox protein 3 [Bos taurus]
Length = 403
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHAPLAERCFSRGESVYCKDDFFKR 90
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 94 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 152
Query: 61 RKK 63
K+
Sbjct: 153 AKQ 155
>gi|324511990|gb|ADY44978.1| Protein lin-11 [Ascaris suum]
Length = 368
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSRKK 63
M CG C I DRY+ V D ++H +C+ C +C L +CF+R+ + CR D+ SR+
Sbjct: 1 MAICGGCNTAILDRYVFHVLDKTWHASCIQCADCKEPLTETCFSRDGLILCRQDF-SRRF 59
Query: 64 GSQ 66
G++
Sbjct: 60 GTR 62
>gi|170055943|ref|XP_001863808.1| lim homeobox protein [Culex quinquefasciatus]
gi|167875776|gb|EDS39159.1| lim homeobox protein [Culex quinquefasciatus]
Length = 456
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+CG C I DR++L+V+D ++H C+ C EC L CF R +L+C+ D+ R
Sbjct: 65 KCGGCHELILDRFILKVSDRTWHAKCLQCSECHVQLNEKCFARNGQLFCKDDFFKR 120
>gi|402896089|ref|XP_003911140.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 3 [Papio anubis]
Length = 373
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+
Sbjct: 1 MQQIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFK 60
Query: 61 R 61
R
Sbjct: 61 R 61
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 65 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 123
Query: 61 RKK 63
K+
Sbjct: 124 AKQ 126
>gi|296191171|ref|XP_002743509.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 3 [Callithrix
jacchus]
Length = 373
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+
Sbjct: 1 MQQIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFK 60
Query: 61 R 61
R
Sbjct: 61 R 61
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 65 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 123
Query: 61 RKK 63
K+
Sbjct: 124 AKQ 126
>gi|158299816|ref|XP_319836.3| AGAP009088-PA [Anopheles gambiae str. PEST]
gi|157013700|gb|EAA14726.3| AGAP009088-PA [Anopheles gambiae str. PEST]
Length = 389
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+CG C I DR++L+V+D ++H C+ C EC L CF R +L+C+ D+ R
Sbjct: 40 KCGGCHELILDRFILKVSDRTWHAKCLQCSECRVQLNEKCFARNGQLFCKDDFFKR 95
>gi|426384765|ref|XP_004058922.1| PREDICTED: insulin gene enhancer protein ISL-1 [Gorilla gorilla
gorilla]
Length = 393
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+C C + + +++R YH C CV C L RE+ L+CR+D+D +
Sbjct: 78 KCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADHDVVE 137
Query: 63 KGS 65
+ S
Sbjct: 138 RAS 140
>gi|397492170|ref|XP_003817001.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 3 [Pan paniscus]
Length = 377
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+
Sbjct: 1 MQQIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFR 60
Query: 61 R 61
R
Sbjct: 61 R 61
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 65 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 123
Query: 61 RKKGSQ 66
K+ Q
Sbjct: 124 AKQRGQ 129
>gi|15706308|dbj|BAB68342.1| Cs-LHX3 [Ciona savignyi]
Length = 472
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+ +C C + I DR++L+V D +H C+ C +CG L CF+R + +YC+ D+ R
Sbjct: 75 IPKCTGCAQHIFDRFILKVQDKPWHAQCLKCGDCGRQLTDKCFSRGSFVYCKEDFFKR 132
>gi|351701911|gb|EHB04830.1| LIM/homeobox protein Lhx3 [Heterocephalus glaber]
Length = 448
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 82 CAGCDQHILDRFVLKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFKR 136
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 140 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 198
Query: 61 RKK 63
K+
Sbjct: 199 AKQ 201
>gi|402896087|ref|XP_003911139.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Papio anubis]
Length = 402
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFKR 90
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 94 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 152
Query: 61 RKK 63
K+
Sbjct: 153 AKQ 155
>gi|297685716|ref|XP_002820429.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Pongo abelii]
Length = 402
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFKR 90
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 94 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 152
Query: 61 RKK 63
K+
Sbjct: 153 AKQ 155
>gi|109109779|ref|XP_001096188.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Macaca mulatta]
Length = 402
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFKR 90
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 94 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 152
Query: 61 RKK 63
K+
Sbjct: 153 AKQ 155
>gi|7657303|ref|NP_055379.1| LIM/homeobox protein Lhx3 isoform b [Homo sapiens]
gi|7110145|gb|AAF36809.1|AF156889_1 LIM homeobox protein 3 isoform b [Homo sapiens]
gi|119608611|gb|EAW88205.1| LIM homeobox 3, isoform CRA_a [Homo sapiens]
gi|157169604|gb|AAI52819.1| LIM homeobox 3 [synthetic construct]
gi|162318656|gb|AAI56736.1| LIM homeobox 3 [synthetic construct]
gi|307685965|dbj|BAJ20913.1| LIM homeobox 3 [synthetic construct]
gi|326205262|dbj|BAJ84013.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 402
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFKR 90
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 94 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 152
Query: 61 RKK 63
K+
Sbjct: 153 AKQ 155
>gi|324540769|gb|ADY49599.1| Protein lin-11, partial [Ascaris suum]
Length = 141
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSRKK 63
M CG C I DRY+ V D ++H +C+ C +C L +CF+R+ + CR D+ SR+
Sbjct: 1 MAICGGCNTAILDRYVFHVLDKTWHASCIQCADCKEPLTETCFSRDGLILCRQDF-SRRF 59
Query: 64 GSQ 66
G++
Sbjct: 60 GTR 62
>gi|441623345|ref|XP_003279691.2| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3
[Nomascus leucogenys]
Length = 419
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDF 87
>gi|395844276|ref|XP_003794888.1| PREDICTED: LIM/homeobox protein Lhx3 [Otolemur garnettii]
Length = 402
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHAPLAERCFSRGESVYCKDDFFKR 90
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 94 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 152
Query: 61 RKK 63
K+
Sbjct: 153 AKQ 155
>gi|410923575|ref|XP_003975257.1| PREDICTED: LIM/homeobox protein Lhx6-like [Takifugu rubripes]
Length = 310
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLA--HSCFTRENKLYCRSDYD 59
P +C SCG I DRYLL+V ++++H C+ C C SL +SC+ + +++C+ DY
Sbjct: 27 PAKNQCASCGMEIQDRYLLKVNNLNWHLGCLECSVCRASLRQHNSCYVKNKEIFCKLDYF 86
Query: 60 SR 61
SR
Sbjct: 87 SR 88
>gi|125986810|ref|XP_001357168.1| GA19074 [Drosophila pseudoobscura pseudoobscura]
gi|195146774|ref|XP_002014359.1| GL19153 [Drosophila persimilis]
gi|54645497|gb|EAL34236.1| GA19074 [Drosophila pseudoobscura pseudoobscura]
gi|194106312|gb|EDW28355.1| GL19153 [Drosophila persimilis]
Length = 241
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 2 PN--MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRS 56
PN +K CG CG I+DRYLL D +H C+ C CG LA SCFTR + C+
Sbjct: 71 PNSLIKVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKK 130
Query: 57 DYDS 60
DY S
Sbjct: 131 DYSS 134
>gi|118343872|ref|NP_001071755.1| LIM/homeobox protein Lhx3a type 1 [Ciona intestinalis]
gi|70570105|dbj|BAE06537.1| transcription factor protein [Ciona intestinalis]
Length = 596
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+C C I DRY+L+V D +H C+ C +CG L CF+R + +YC+ D+ R
Sbjct: 194 KCTGCDHHIFDRYILKVQDKPWHSQCLKCNDCGRQLTDKCFSRGSYVYCKEDFFKR 249
>gi|109109777|ref|XP_001096075.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Macaca mulatta]
Length = 397
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFKR 85
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 89 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 147
Query: 61 RKK 63
K+
Sbjct: 148 AKQ 150
>gi|403182403|gb|EAT47695.2| AAEL001207-PA [Aedes aegypti]
Length = 702
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLA---HSCFTRENKLYCRSDY 58
+K CG CG IT+R+ L D +H +C+ C CG LA SC+TR + C++DY
Sbjct: 74 VKHCGGCGGKITERFFLHALDRYWHNSCLKCSCCGAMLADIGSSCYTRSGMILCKADY 131
>gi|14579221|gb|AAK69169.1|AF282899_1 LIM homeobox protein [Homo sapiens]
gi|15146348|dbj|BAB62817.1| LIM homeobox 4 [Homo sapiens]
Length = 367
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 1 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|4809173|gb|AAD30125.1|AF135415_1 LIM-homeobox protein [Mus musculus]
Length = 367
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 1 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|296191167|ref|XP_002743507.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Callithrix
jacchus]
Length = 402
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFKR 90
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 94 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 152
Query: 61 RKK 63
K+
Sbjct: 153 AKQ 155
>gi|194758260|ref|XP_001961380.1| GF13843 [Drosophila ananassae]
gi|190622678|gb|EDV38202.1| GF13843 [Drosophila ananassae]
Length = 469
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
N+ EC CGR I DR+ L + +H +C+ C C L SC++R+ +YC++DY
Sbjct: 144 NLDECAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDY 201
>gi|30023847|ref|NP_835258.1| LIM/homeobox protein Lhx3 isoform a [Homo sapiens]
gi|12643415|sp|Q9UBR4.2|LHX3_HUMAN RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox
protein 3
gi|7110143|gb|AAF36808.1|AF156888_1 LIM homeobox protein 3 isoform a [Homo sapiens]
gi|16565927|gb|AAL26314.1| LIM homeobox protein 3 [Homo sapiens]
gi|119608612|gb|EAW88206.1| LIM homeobox 3, isoform CRA_b [Homo sapiens]
gi|326205254|dbj|BAJ84009.1| LIM/homeobox protein Lhx3 [Homo sapiens]
gi|326205256|dbj|BAJ84010.1| LIM/homeobox protein Lhx3 [Homo sapiens]
gi|326205264|dbj|BAJ84014.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 397
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFKR 85
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 89 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 147
Query: 61 RKK 63
K+
Sbjct: 148 AKQ 150
>gi|402896085|ref|XP_003911138.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Papio anubis]
Length = 397
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFKR 85
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 89 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 147
Query: 61 RKK 63
K+
Sbjct: 148 AKQ 150
>gi|194859624|ref|XP_001969417.1| GG23969 [Drosophila erecta]
gi|190661284|gb|EDV58476.1| GG23969 [Drosophila erecta]
Length = 241
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRSDYDS 60
+K CG CG I+DRYLL D +H C+ C CG LA SCFTR + C+ DY S
Sbjct: 75 IKVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSS 134
>gi|15146350|dbj|BAB62818.1| LIM homeobox 4 transcript variant [Homo sapiens]
Length = 60
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M + +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 1 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDF 58
>gi|321454677|gb|EFX65838.1| hypothetical protein DAPPUDRAFT_13685 [Daphnia pulex]
Length = 266
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYD 59
C CG I DRY L D ++H C+ C EC L A SCF R++++YCR DY+
Sbjct: 2 CAGCGFKIVDRYYLVAVDKAWHSECLRCDECRRPLDTALSCFARQSRIYCREDYN 56
>gi|296191169|ref|XP_002743508.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Callithrix
jacchus]
Length = 397
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFKR 85
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 89 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 147
Query: 61 RKK 63
K+
Sbjct: 148 AKQ 150
>gi|195339689|ref|XP_002036449.1| GM11938 [Drosophila sechellia]
gi|195473535|ref|XP_002089048.1| GE26318 [Drosophila yakuba]
gi|195578073|ref|XP_002078890.1| GD22293 [Drosophila simulans]
gi|194130329|gb|EDW52372.1| GM11938 [Drosophila sechellia]
gi|194175149|gb|EDW88760.1| GE26318 [Drosophila yakuba]
gi|194190899|gb|EDX04475.1| GD22293 [Drosophila simulans]
Length = 241
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRSDYDS 60
+K CG CG I+DRYLL D +H C+ C CG LA SCFTR + C+ DY S
Sbjct: 75 IKVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSS 134
>gi|158296017|ref|XP_001237835.2| AGAP006537-PA [Anopheles gambiae str. PEST]
gi|157016310|gb|EAU76621.2| AGAP006537-PA [Anopheles gambiae str. PEST]
Length = 271
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDS 60
K CGSC PITDRY+ V ++H +C+ C C L SC+ R+ +YC+SDY
Sbjct: 4 EFKTCGSCAEPITDRYIFEVNGSAWHGSCLRCTVCFCPLERQVSCYLRDGDMYCKSDYIK 63
Query: 61 RKKGS 65
+ K S
Sbjct: 64 KFKTS 68
>gi|403301480|ref|XP_003941417.1| PREDICTED: LIM/homeobox protein Lhx3 [Saimiri boliviensis
boliviensis]
Length = 397
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFKR 85
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 89 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 147
Query: 61 RKK 63
K+
Sbjct: 148 AKQ 150
>gi|194226030|ref|XP_001918019.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3 [Equus
caballus]
Length = 401
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFKR 88
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 92 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 150
Query: 61 RKK 63
K+
Sbjct: 151 AKQ 153
>gi|195119225|ref|XP_002004132.1| GI18740 [Drosophila mojavensis]
gi|193914707|gb|EDW13574.1| GI18740 [Drosophila mojavensis]
Length = 238
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 2 PN--MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRS 56
PN +K CG CG I+DRYLL D +H +C+ C CG LA SCFTR + C+
Sbjct: 70 PNTLIKVCGGCGDKISDRYLLYALDRYWHNSCLKCHCCGAMLADVGSSCFTRRGLILCKK 129
Query: 57 DYDS 60
DY S
Sbjct: 130 DYSS 133
>gi|24583264|ref|NP_609359.1| CG5708, isoform A [Drosophila melanogaster]
gi|24583266|ref|NP_723534.1| CG5708, isoform B [Drosophila melanogaster]
gi|22946096|gb|AAF52877.2| CG5708, isoform A [Drosophila melanogaster]
gi|22946097|gb|AAN10724.1| CG5708, isoform B [Drosophila melanogaster]
gi|46409202|gb|AAS93758.1| LD11652p [Drosophila melanogaster]
Length = 241
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRSDYDS 60
+K CG CG I+DRYLL D +H C+ C CG LA SCFTR + C+ DY S
Sbjct: 75 IKVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSS 134
>gi|194761684|ref|XP_001963058.1| GF14129 [Drosophila ananassae]
gi|190616755|gb|EDV32279.1| GF14129 [Drosophila ananassae]
Length = 241
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRSDYDS 60
+K CG CG I+DRYLL D +H C+ C CG LA SCFTR + C+ DY S
Sbjct: 75 IKVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSS 134
>gi|195114382|ref|XP_002001746.1| GI17017 [Drosophila mojavensis]
gi|193912321|gb|EDW11188.1| GI17017 [Drosophila mojavensis]
Length = 533
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 MKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
+ C CG I D+Y+LRVA D+ +H C+ C EC L SC F R+ K YC+ DY
Sbjct: 59 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 116
>gi|431908581|gb|ELK12174.1| Insulin protein enhancer protein ISL-1 [Pteropus alecto]
Length = 383
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 51 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 105
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+C C + + +++R YH C CV C L RE+ L+CR+D+D +
Sbjct: 112 KCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADHDVVE 171
Query: 63 KGS 65
+ S
Sbjct: 172 RAS 174
>gi|397492166|ref|XP_003816999.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Pan paniscus]
Length = 401
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFRR 85
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 89 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 147
Query: 61 RKKGSQ 66
K+ Q
Sbjct: 148 AKQRGQ 153
>gi|114627512|ref|XP_001171089.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Pan troglodytes]
Length = 402
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFRR 90
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 94 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 152
Query: 61 RKK 63
K+
Sbjct: 153 AKQ 155
>gi|114627514|ref|XP_001171072.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Pan troglodytes]
Length = 397
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFRR 85
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 89 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 147
Query: 61 RKK 63
K+
Sbjct: 148 AKQ 150
>gi|348574776|ref|XP_003473166.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3-like
[Cavia porcellus]
Length = 403
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLRCSDCHTPLAERCFSRGESVYCKDDFFKR 90
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 94 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYEA 152
Query: 61 RKK 63
K+
Sbjct: 153 AKQ 155
>gi|195403013|ref|XP_002060090.1| GJ14918 [Drosophila virilis]
gi|194149412|gb|EDW65107.1| GJ14918 [Drosophila virilis]
Length = 240
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRSDYDS 60
+K CG CG I+DRYLL D +H C+ C CG LA SCFTR + C+ DY S
Sbjct: 74 IKVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLADVGASCFTRRGLILCKKDYSS 133
>gi|170034020|ref|XP_001844873.1| arrowhead [Culex quinquefasciatus]
gi|167875281|gb|EDS38664.1| arrowhead [Culex quinquefasciatus]
Length = 304
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDS 60
++ C +CG PI+D+YLL V S+H C+ C C L SCF R+ ++YC++DY S
Sbjct: 7 LRSCTACGEPISDQYLLDVGGCSWHSACLRCCICHTPLDQQPSCFLRDRQIYCKADYAS 65
>gi|297294254|ref|XP_001094225.2| PREDICTED: insulin gene enhancer protein ISL-1-like [Macaca
mulatta]
Length = 286
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
>gi|195050615|ref|XP_001992931.1| GH13372 [Drosophila grimshawi]
gi|193899990|gb|EDV98856.1| GH13372 [Drosophila grimshawi]
Length = 241
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRSDYDS 60
+K CG CG I+DRYLL D +H C+ C CG LA SCFTR + C+ DY S
Sbjct: 74 IKVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLADVGSSCFTRRGLILCKKDYSS 133
>gi|307200797|gb|EFN80850.1| LIM/homeobox protein Lhx3 [Harpegnathos saltator]
Length = 421
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
++ +CG C I D+Y+LRV + +H C+ C +CG L CF R ++CR D+ R
Sbjct: 84 SIPKCGGCQEVILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCREDFFKR 142
>gi|157127146|ref|XP_001661055.1| lim homeobox protein [Aedes aegypti]
gi|108873020|gb|EAT37245.1| AAEL010744-PA [Aedes aegypti]
Length = 459
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+ +CG C I DR++L+V+D ++H C+ C +C L CF R +L+C+ D+ R
Sbjct: 60 IPKCGGCHELILDRFILKVSDRTWHAKCLQCSDCHIQLNEKCFARNGQLFCKDDFFKR 117
>gi|157115167|ref|XP_001652548.1| lim homeobox protein [Aedes aegypti]
gi|108876992|gb|EAT41217.1| AAEL007120-PA [Aedes aegypti]
Length = 459
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+ +CG C I DR++L+V+D ++H C+ C +C L CF R +L+C+ D+ R
Sbjct: 60 IPKCGGCHELILDRFILKVSDRTWHAKCLQCSDCHIQLNEKCFARNGQLFCKDDFFKR 117
>gi|354497582|ref|XP_003510898.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Cricetulus
griseus]
gi|344256661|gb|EGW12765.1| LIM/homeobox protein Lhx3 [Cricetulus griseus]
Length = 403
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHIPLAERCFSRGESVYCKDDFFKR 90
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 94 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 152
Query: 61 RKK 63
K+
Sbjct: 153 AKQ 155
>gi|350427425|ref|XP_003494754.1| PREDICTED: LIM domain only protein 3-like [Bombus impatiens]
Length = 220
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 5 KECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRSDY 58
+ECG CG IT+RYLL+V D+ +HE+C+ C C L S F + N + C+ DY
Sbjct: 16 RECGGCGEVITERYLLKVLDMFWHEDCLKCNSCNCRLVEAGPSLFIKSNLILCKKDY 72
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 7 CGSCGRPITD-RYLLRVADISYHENCVACVECGHS--LAHSCFTRENKLYCRSDYDSRKK 63
C +C + I ++R YH C AC +C + + F ENK+ C SDY+ R
Sbjct: 82 CAACNKTIPAFEMVMRARTNVYHLECFACQQCNYRFCIGDKFFLCENKILCESDYEER-- 139
Query: 64 GSQLVTVLFYSMYVH 78
++F +M VH
Sbjct: 140 ------LVFANMAVH 148
>gi|198473929|ref|XP_001356494.2| GA10441 [Drosophila pseudoobscura pseudoobscura]
gi|198138172|gb|EAL33558.2| GA10441 [Drosophila pseudoobscura pseudoobscura]
Length = 548
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 MKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
+ C CG I D+Y+LRVA D+ +H C+ C EC L SC F R+ K YC+ DY
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 108
>gi|195147414|ref|XP_002014675.1| GL18825 [Drosophila persimilis]
gi|194106628|gb|EDW28671.1| GL18825 [Drosophila persimilis]
Length = 550
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 MKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
+ C CG I D+Y+LRVA D+ +H C+ C EC L SC F R+ K YC+ DY
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 108
>gi|293345787|ref|XP_001078243.2| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Rattus
norvegicus]
gi|293357700|ref|XP_001059910.2| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Rattus
norvegicus]
gi|149039302|gb|EDL93522.1| rCG45383, isoform CRA_b [Rattus norvegicus]
Length = 402
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKR 90
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 94 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 152
Query: 61 RKK 63
K+
Sbjct: 153 AKQ 155
>gi|195433046|ref|XP_002064526.1| GK23894 [Drosophila willistoni]
gi|194160611|gb|EDW75512.1| GK23894 [Drosophila willistoni]
Length = 539
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 MKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
+ C CG I D+Y+LRVA D+ +H C+ C EC L SC F R+ K YC+ DY
Sbjct: 49 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 106
>gi|440908077|gb|ELR58138.1| Insulin enhancer protein ISL-1, partial [Bos grunniens mutus]
Length = 359
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 27 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 81
>gi|195386470|ref|XP_002051927.1| GJ24442 [Drosophila virilis]
gi|194148384|gb|EDW64082.1| GJ24442 [Drosophila virilis]
Length = 529
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 MKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
+ C CG I D+Y+LRVA D+ +H C+ C EC L SC F R+ K YC+ DY
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 108
>gi|195441498|ref|XP_002068546.1| GK20529 [Drosophila willistoni]
gi|194164631|gb|EDW79532.1| GK20529 [Drosophila willistoni]
Length = 275
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
++ C +CG PI+DR+ L V S+H +C+ C C L SC+ RE ++YC++DY
Sbjct: 4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCYIRERQVYCKADY 61
>gi|148676345|gb|EDL08292.1| mCG18748, isoform CRA_b [Mus musculus]
Length = 402
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKR 90
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 94 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 152
Query: 61 RKK 63
K+
Sbjct: 153 AKQ 155
>gi|354500653|ref|XP_003512413.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Cricetulus griseus]
Length = 377
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + ++YC+ DY SR
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYFSR 155
>gi|354500651|ref|XP_003512412.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Cricetulus griseus]
Length = 392
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + ++YC+ DY SR
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYFSR 155
>gi|242023957|ref|XP_002432397.1| lim homeobox protein, putative [Pediculus humanus corporis]
gi|212517820|gb|EEB19659.1| lim homeobox protein, putative [Pediculus humanus corporis]
Length = 340
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
P + +C CGR I+DR+ L D +H C+ C +C +L +CFTR +YC+ DY
Sbjct: 280 PGIVDCAGCGRKISDRFYLSAVDRKWHATCLQCCQCRIALDGEITCFTRHGNIYCKKDY 338
>gi|133893073|ref|NP_001076594.1| LIM/homeobox protein Lhx6 isoform 2 [Mus musculus]
Length = 377
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + ++YC+ DY SR
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYFSR 155
>gi|133891794|ref|NP_032526.2| LIM/homeobox protein Lhx6 isoform 1 [Mus musculus]
Length = 392
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + ++YC+ DY SR
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYFSR 155
>gi|345322211|ref|XP_003430546.1| PREDICTED: LIM/homeobox protein Lhx2-like [Ornithorhynchus
anatinus]
Length = 394
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|340710495|ref|XP_003393823.1| PREDICTED: LIM domain only protein 3-like [Bombus terrestris]
Length = 220
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 5 KECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRSDY 58
+ECG CG IT+RYLL+V D+ +HE+C+ C C L S F + N + C+ DY
Sbjct: 16 RECGGCGEVITERYLLKVLDMFWHEDCLKCNSCNCRLVEAGPSLFIKSNLILCKKDY 72
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 7 CGSCGRPITD-RYLLRVADISYHENCVACVECGHS--LAHSCFTRENKLYCRSDYDSRKK 63
C +C + I ++R YH C AC +C + + F ENK+ C SDY+ R
Sbjct: 82 CAACNKTIPAFEMVMRARTNVYHLECFACQQCNYRFCIGDKFFLCENKILCESDYEER-- 139
Query: 64 GSQLVTVLFYSMYVH 78
++F +M VH
Sbjct: 140 ------LVFANMAVH 148
>gi|449269080|gb|EMC79889.1| LIM/homeobox protein Lhx3, partial [Columba livia]
Length = 342
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C + I DR++L+V D +H C+ C +C LA CF+R + +YC+ D+
Sbjct: 4 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFSRGDGVYCKEDF 55
>gi|354497584|ref|XP_003510899.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Cricetulus
griseus]
Length = 401
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHIPLAERCFSRGESVYCKDDFFKR 88
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 92 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 150
Query: 61 RKK 63
K+
Sbjct: 151 AKQ 153
>gi|348500124|ref|XP_003437623.1| PREDICTED: insulin gene enhancer protein ISL-3-like [Oreochromis
niloticus]
Length = 360
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+Y+LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGFAMCVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|307196006|gb|EFN77731.1| LIM/homeobox protein Lhx9 [Harpegnathos saltator]
Length = 433
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
CG CGR I +R+ L+ AD +H C+ C C LA +CF R+ +YC+ DY
Sbjct: 58 CGGCGREIAERWYLKAADRVWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDY 111
>gi|209737368|gb|ACI69553.1| Insulin gene enhancer protein isl-1 [Salmo salar]
Length = 356
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
>gi|296194639|ref|XP_002745038.1| PREDICTED: insulin gene enhancer protein ISL-1 [Callithrix
jacchus]
Length = 348
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
>gi|391341454|ref|XP_003745045.1| PREDICTED: LIM/homeobox protein Lhx9-like [Metaseiulus
occidentalis]
Length = 343
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG PI DRY L V ++ +H C+ C C +L SCF R ++YC++DY
Sbjct: 25 CTGCGNPICDRYFLCVGEMYWHVGCLQCAHCKTTLEQHASCFLRSGRIYCKNDY 78
>gi|345304657|ref|XP_001508080.2| PREDICTED: insulin gene enhancer protein ISL-1-like
[Ornithorhynchus anatinus]
Length = 382
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 50 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDY 104
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+C C + + +++R YH C CV C L RE+ L+CR+D+D +
Sbjct: 111 KCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADHDVVE 170
Query: 63 KGS 65
+ S
Sbjct: 171 RAS 173
>gi|355692896|gb|EHH27499.1| Insulin gene enhancer protein ISL-2 [Macaca mulatta]
Length = 310
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTAMCVGCGSQIHDQFILRVSPDLGWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
Query: 59 DSRK 62
R+
Sbjct: 82 SLRE 85
>gi|426246540|ref|XP_004017051.1| PREDICTED: insulin gene enhancer protein ISL-1 [Ovis aries]
Length = 349
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
>gi|89001116|ref|NP_001034742.1| LIM/homeobox protein Lhx3 [Mus musculus]
gi|598327|gb|AAB64178.1| homeodomain protein [Mus musculus]
gi|124375774|gb|AAI32557.1| LIM homeobox protein 3 [Mus musculus]
gi|124376794|gb|AAI32555.1| LIM homeobox protein 3 [Mus musculus]
Length = 402
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKR 90
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 94 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 152
Query: 61 RKK 63
K+
Sbjct: 153 AKQ 155
>gi|321468800|gb|EFX79783.1| hypothetical protein DAPPUDRAFT_51838 [Daphnia pulex]
Length = 161
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 5 KECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRSDY 58
+ECG CG+ ITDRYLL+ D+ +HE+C+ C C L+ + +TR N + CR DY
Sbjct: 16 QECGGCGKFITDRYLLQALDLYWHEDCLKCGCCDCRLSENGSTLYTRANLVLCRRDY 72
>gi|326668246|ref|XP_685757.4| PREDICTED: LIM/homeobox protein Lhx6 [Danio rerio]
Length = 270
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDS 60
C C I DRY+L+V +++H C+ C C SL H SCF R +++CR+DY+S
Sbjct: 33 CTGCSTEIFDRYVLKVNGLTWHLRCLQCSVCAVSLGHQNSCFIRNKEIFCRTDYNS 88
>gi|18858905|ref|NP_571037.1| insulin gene enhancer protein isl-1 [Danio rerio]
gi|1708559|sp|P53405.1|ISL1_DANRE RecName: Full=Insulin gene enhancer protein isl-1; Short=Islet-1
gi|497898|dbj|BAA04670.1| insulin gene enhancer binding protein [Danio rerio]
gi|38173895|gb|AAH60892.1| Isl1 protein [Danio rerio]
Length = 349
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
>gi|533419|gb|AAA81946.1| ISL-1 [Homo sapiens]
Length = 346
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 14 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 68
>gi|301768533|ref|XP_002919684.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Ailuropoda
melanoleuca]
Length = 349
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
>gi|281342386|gb|EFB17970.1| hypothetical protein PANDA_008333 [Ailuropoda melanoleuca]
Length = 340
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 8 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 62
>gi|157115827|ref|XP_001658301.1| hypothetical protein AaeL_AAEL001214 [Aedes aegypti]
Length = 181
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRSDYDS 60
+K CG CG IT+R+ L D +H +C+ C CG LA SC+TR + C++DY S
Sbjct: 74 VKHCGGCGGKITERFFLHALDRYWHNSCLKCSCCGAMLADIGSSCYTRSGMILCKADYSS 133
Query: 61 RK 62
+
Sbjct: 134 EE 135
>gi|94400881|ref|NP_059035.3| insulin gene enhancer protein ISL-1 [Rattus norvegicus]
gi|115387114|ref|NP_002193.2| insulin gene enhancer protein ISL-1 [Homo sapiens]
gi|149642655|ref|NP_001092600.1| insulin gene enhancer protein ISL-1 [Bos taurus]
gi|162287065|ref|NP_067434.3| insulin gene enhancer protein ISL-1 [Mus musculus]
gi|291395329|ref|XP_002714072.1| PREDICTED: islet-1 [Oryctolagus cuniculus]
gi|311273676|ref|XP_003133982.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Sus scrofa]
gi|332254884|ref|XP_003276562.1| PREDICTED: insulin gene enhancer protein ISL-1 [Nomascus
leucogenys]
gi|332821395|ref|XP_001150633.2| PREDICTED: insulin gene enhancer protein ISL-1 isoform 2 [Pan
troglodytes]
gi|344272509|ref|XP_003408074.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Loxodonta
africana]
gi|345799577|ref|XP_853721.2| PREDICTED: insulin gene enhancer protein ISL-1 isoform 1 [Canis
lupus familiaris]
gi|348568904|ref|XP_003470238.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Cavia
porcellus]
gi|354472426|ref|XP_003498440.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Cricetulus
griseus]
gi|395818859|ref|XP_003782831.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Otolemur
garnettii]
gi|397514229|ref|XP_003827396.1| PREDICTED: insulin gene enhancer protein ISL-1 [Pan paniscus]
gi|402871509|ref|XP_003899703.1| PREDICTED: insulin gene enhancer protein ISL-1 [Papio anubis]
gi|403267625|ref|XP_003925922.1| PREDICTED: insulin gene enhancer protein ISL-1 [Saimiri
boliviensis boliviensis]
gi|410949527|ref|XP_003981473.1| PREDICTED: insulin gene enhancer protein ISL-1 [Felis catus]
gi|47606422|sp|P61374.1|ISL1_RAT RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606423|sp|P61371.1|ISL1_HUMAN RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606424|sp|P61372.1|ISL1_MOUSE RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606425|sp|P61373.1|ISL1_MESAU RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|2137056|pir||I67418 transcription factor isl-1 - hamster
gi|4261764|gb|AAD14064.1|S70721_1 homeobox [Homo sapiens]
gi|545787|gb|AAB30128.1| homeobox [Rattus sp.]
gi|4469284|emb|CAB38446.1| Lim-homeodomain protein Islet1 [Mus musculus]
gi|22658390|gb|AAH31213.1| ISL LIM homeobox 1 [Homo sapiens]
gi|30065750|gb|AAP20776.1| Isl-1 [Cricetulus sp.]
gi|119575256|gb|EAW54861.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [Homo
sapiens]
gi|123996141|gb|ABM85672.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [synthetic
construct]
gi|124298178|gb|AAI32264.1| ISL1 transcription factor, LIM/homeodomain [Mus musculus]
gi|124375804|gb|AAI32610.1| ISL1 transcription factor, LIM/homeodomain [Mus musculus]
gi|148686421|gb|EDL18368.1| ISL1 transcription factor, LIM/homeodomain, isoform CRA_b [Mus
musculus]
gi|148877422|gb|AAI46164.1| ISL1 protein [Bos taurus]
gi|149059388|gb|EDM10395.1| ISL1 transcription factor, LIM/homeodomain 1 [Rattus norvegicus]
gi|157928248|gb|ABW03420.1| ISL LIM homeobox 1 [synthetic construct]
gi|261861196|dbj|BAI47120.1| ISL LIM homeobox 1 [synthetic construct]
gi|296475787|tpg|DAA17902.1| TPA: islet-1 [Bos taurus]
gi|351712707|gb|EHB15626.1| Insulin gene enhancer protein ISL-1 [Heterocephalus glaber]
gi|355691298|gb|EHH26483.1| Insulin gene enhancer protein ISL-1 [Macaca mulatta]
gi|226841|prf||1608207A insulin gene enhancer binding protein Isl-1
Length = 349
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
>gi|28569978|dbj|BAC57891.1| transcription factor islet-1 isoform beta [Mus musculus]
gi|148686420|gb|EDL18367.1| ISL1 transcription factor, LIM/homeodomain, isoform CRA_a [Mus
musculus]
Length = 326
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
>gi|194223906|ref|XP_001916580.1| PREDICTED: insulin gene enhancer protein ISL-1 [Equus caballus]
Length = 349
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
>gi|57613|emb|CAA37349.1| insulin gene enhancer binding protein [Rattus rattus]
Length = 313
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 14 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 68
>gi|158254920|dbj|BAF83431.1| unnamed protein product [Homo sapiens]
Length = 349
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQCLDESCTCFVRDGKTYCKRDY 71
>gi|18858909|ref|NP_571039.1| insulin gene enhancer protein isl-2b [Danio rerio]
gi|1708564|sp|P53407.1|ISL2B_DANRE RecName: Full=Insulin gene enhancer protein isl-2b;
Short=Islet-2B; AltName: Full=Insulin gene enhancer
protein isl-3; Short=Islet-3
gi|1037168|dbj|BAA07485.1| zfIsl-3 [Danio rerio]
gi|55962547|emb|CAI11499.1| islet 3 [Danio rerio]
gi|63100507|gb|AAH95011.1| Islet2b [Danio rerio]
Length = 358
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ CVEC L +CF R+ K YC+ DY
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCVECNQYLDETCTCFVRDGKTYCKRDY 81
>gi|355749907|gb|EHH54245.1| Insulin gene enhancer protein ISL-1 [Macaca fascicularis]
Length = 349
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Query: 18 YLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRKKGSQLVTVLFYSM 75
+++R YH C CV C L RE+ L+CR+D+D ++ S +
Sbjct: 91 FVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADHDVVERASLGAGDPLSPL 150
Query: 76 YVHSVMKFHTITLPLHTITIRIQV 99
+ ++ LP +R V
Sbjct: 151 HPARPLQMAGTPLPGSXXXLRPHV 174
>gi|143347423|gb|ABO93221.1| Islet [Platynereis dumerilii]
Length = 414
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRVA D+ +H C+ C +C L +C F RE K YC+ DY
Sbjct: 22 CVGCGSKIQDQYILRVAPDLEWHAACLKCADCDQFLDETCTCFVREGKTYCKRDY 76
>gi|345326474|ref|XP_003431047.1| PREDICTED: LOW QUALITY PROTEIN: LIM domain kinase 1-like
[Ornithorhynchus anatinus]
Length = 642
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C CG+ I D L+ + +H +C C ECG SL+H + ++ +LYC+ DY R
Sbjct: 25 CADCGQSIFDGQYLQALNADWHSDCFRCCECGASLSHQYYEKDGRLYCKKDYWMR 79
>gi|260794979|ref|XP_002592484.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
gi|229277704|gb|EEN48495.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
Length = 330
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
P CG CG I DR+ L D +H C+ C EC L +CF+++ ++YCR DY
Sbjct: 10 PGSIACGGCGEKIQDRFFLHAVDRQWHSACLKCCECDVRLDCELTCFSKDGRIYCREDY 68
>gi|1708557|sp|P53408.1|ISL2A_ONCTS RecName: Full=Insulin gene enhancer protein ISL-2A;
Short=Islet-2A
Length = 358
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRVA D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 27 CVGCGSQIHDQYILRVAPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|449509311|ref|XP_004174248.1| PREDICTED: LIM/homeobox protein Lhx4-like [Taeniopygia guttata]
Length = 100
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
+ +C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+
Sbjct: 43 EIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLAERCFSRAGSVYCKEDF 98
>gi|301780216|ref|XP_002925525.1| PREDICTED: insulin gene enhancer protein ISL-2-like [Ailuropoda
melanoleuca]
Length = 540
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTAMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|195353746|ref|XP_002043364.1| GM16501 [Drosophila sechellia]
gi|194127487|gb|EDW49530.1| GM16501 [Drosophila sechellia]
Length = 535
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
N+ +C CGR I DR+ L + +H +C+ C C L SC++R+ +YC++DY
Sbjct: 210 NLDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDY 267
>gi|348539204|ref|XP_003457079.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 1
[Oreochromis niloticus]
Length = 349
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDESCTCFVRDGKTYCKRDY 71
>gi|125810912|ref|XP_001361667.1| ap [Drosophila pseudoobscura pseudoobscura]
gi|195154388|ref|XP_002018104.1| GL16944 [Drosophila persimilis]
gi|27374288|gb|AAO01041.1| ap-PA [Drosophila pseudoobscura]
gi|54636843|gb|EAL26246.1| ap [Drosophila pseudoobscura pseudoobscura]
gi|194113900|gb|EDW35943.1| GL16944 [Drosophila persimilis]
Length = 469
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
N+ +C CGR I DR+ L + +H +C+ C C L SC++R+ +YC++DY
Sbjct: 144 NLDDCAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDY 201
>gi|432105544|gb|ELK31741.1| Insulin protein enhancer protein ISL-1 [Myotis davidii]
Length = 199
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
>gi|355763645|gb|EHH62200.1| LIM/homeobox protein LMX1B [Macaca fascicularis]
Length = 379
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 17 RYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
R+L+RV + S+HE C+ C C +L SC+ R+ KLYC+ DY
Sbjct: 47 RFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY 88
>gi|348586764|ref|XP_003479138.1| PREDICTED: LIM/homeobox protein Lhx8-like [Cavia porcellus]
Length = 485
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYD 59
P C SCG I D+YLL+V D+ +H C++C C SL SC+ ++ ++C+ DY
Sbjct: 210 PGKCVCSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYF 269
Query: 60 SR 61
R
Sbjct: 270 RR 271
>gi|339252354|ref|XP_003371400.1| insulin protein enhancer protein ISL-1 [Trichinella spiralis]
gi|316968379|gb|EFV52660.1| insulin protein enhancer protein ISL-1 [Trichinella spiralis]
Length = 1751
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ CV+C L +CF R+ K YC+ DY
Sbjct: 1318 CNGCGHEILDQYILRVSPDLEWHAACLKCVDCRQFLDETCTCFVRDGKPYCKLDY 1372
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 7 CGSCGRPITDR--YLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
C CG + DR Y++R + YH +C CV C L R LYC++DY+ +
Sbjct: 1380 CSKCGE-VFDRNDYVMRAKNNLYHISCFKCVVCTRPLLPGDEFALRHIALYCKADYELAE 1438
Query: 63 KGS 65
+ S
Sbjct: 1439 RNS 1441
>gi|160420135|ref|NP_001104188.1| ISL LIM homeobox 1 [Xenopus laevis]
gi|115528275|gb|AAI24895.1| LOC100126604 protein [Xenopus laevis]
gi|144952770|gb|ABP04039.1| islet-1 [Xenopus laevis]
gi|213626865|gb|AAI70282.1| Islet-1 [Xenopus laevis]
Length = 354
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDESCTCFVRDGKTYCKRDY 71
>gi|390356846|ref|XP_785118.3| PREDICTED: LIM/homeobox protein Awh-like [Strongylocentrotus
purpuratus]
Length = 335
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 5 KECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLA--HSCFTRENKLYCRSDYDSR 61
+ C CG+ I DRYLLR+ +S+H +C+ C+EC SL+ SC+ ++ ++CR Y SR
Sbjct: 35 ESCAGCGKAIIDRYLLRIGRGLSWHSSCLRCLECDESLSSHQSCYFKDQNVFCRKCY-SR 93
Query: 62 KKGSQLVTVL 71
+ G++ L
Sbjct: 94 EFGTKCARCL 103
>gi|195438224|ref|XP_002067037.1| GK24239 [Drosophila willistoni]
gi|194163122|gb|EDW78023.1| GK24239 [Drosophila willistoni]
Length = 448
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+CG C I DR++L+V + ++H C+ C EC L CF R +L+C+ D+ R
Sbjct: 41 KCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKR 96
>gi|301615074|ref|XP_002937009.1| PREDICTED: LIM/homeobox protein Lhx4-like [Xenopus (Silurana)
tropicalis]
Length = 385
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 1 MPN-MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
MP + C C I D+++L+V D +H C+ C EC LA CF R +YC+ D+
Sbjct: 32 MPKEIPRCSGCNEHILDKFILKVLDRHWHSACLKCCECQVPLAERCFYRAGNVYCKEDF 90
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C +C + I ++R A D YH +C +C+ C LA + +L C+ DY++
Sbjct: 97 KCTACQQGIPPTQVVRKAQDFVYHLHCFSCIICSRQLATGDEFYLMEDGRLVCKEDYETA 156
Query: 62 KK 63
K+
Sbjct: 157 KQ 158
>gi|195050066|ref|XP_001992820.1| GH13485 [Drosophila grimshawi]
gi|193899879|gb|EDV98745.1| GH13485 [Drosophila grimshawi]
Length = 451
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+CG C I DR++L+V + ++H C+ C EC L CF R +L+C+ D+ R
Sbjct: 41 KCGGCHELILDRFILKVLERTWHAKCLQCSECHSQLNDKCFARNGQLFCKEDFFKR 96
>gi|341889206|gb|EGT45141.1| CBN-LIN-11 protein [Caenorhabditis brenneri]
Length = 372
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
EC +C +PI DRY+ V +H++C+ C +C ++ +CF+++ + C+SDY R
Sbjct: 74 ECAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSMTCFSKDGLILCKSDYSRR 129
>gi|195164562|ref|XP_002023115.1| GL21181 [Drosophila persimilis]
gi|194105200|gb|EDW27243.1| GL21181 [Drosophila persimilis]
Length = 436
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+CG C I DR++L+V + ++H C+ C EC L CF R +L+C+ D+ R
Sbjct: 47 KCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKR 102
>gi|194864184|ref|XP_001970812.1| ap [Drosophila erecta]
gi|190662679|gb|EDV59871.1| ap [Drosophila erecta]
Length = 469
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
N+ +C CGR I DR+ L + +H +C+ C C L SC++R+ +YC++DY
Sbjct: 144 NLDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDY 201
>gi|426218775|ref|XP_004003612.1| PREDICTED: LIM/homeobox protein Lhx8 [Ovis aries]
Length = 442
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYD 59
P C SCG I D+YLL+V D+ +H C++C C SL SC+ ++ ++C+ DY
Sbjct: 156 PGKCVCSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYF 215
Query: 60 SR 61
R
Sbjct: 216 RR 217
>gi|24585889|ref|NP_724428.1| apterous, isoform A [Drosophila melanogaster]
gi|195580840|ref|XP_002080242.1| GD10352 [Drosophila simulans]
gi|231559|sp|P29673.1|APTE_DROME RecName: Full=Protein apterous
gi|7601|emb|CAA46276.1| developmental regulatory protein [Drosophila melanogaster]
gi|157822|gb|AAA28673.1| LIM-homeodomain apterous protein [Drosophila melanogaster]
gi|7302219|gb|AAF57314.1| apterous, isoform A [Drosophila melanogaster]
gi|28912908|gb|AAO61758.1| HL02012p [Drosophila melanogaster]
gi|194192251|gb|EDX05827.1| GD10352 [Drosophila simulans]
gi|220942502|gb|ACL83794.1| ap-PA [synthetic construct]
gi|220952712|gb|ACL88899.1| ap-PA [synthetic construct]
Length = 469
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
N+ +C CGR I DR+ L + +H +C+ C C L SC++R+ +YC++DY
Sbjct: 144 NLDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDY 201
>gi|281360182|ref|NP_001163058.1| apterous, isoform C [Drosophila melanogaster]
gi|17862966|gb|AAL39960.1| SD05618p [Drosophila melanogaster]
gi|272432345|gb|ACZ94338.1| apterous, isoform C [Drosophila melanogaster]
Length = 468
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
N+ +C CGR I DR+ L + +H +C+ C C L SC++R+ +YC++DY
Sbjct: 143 NLDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDY 200
>gi|348539206|ref|XP_003457080.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 2
[Oreochromis niloticus]
Length = 357
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDESCTCFVRDGKTYCKRDY 71
>gi|410922098|ref|XP_003974520.1| PREDICTED: insulin gene enhancer protein isl-1-like [Takifugu
rubripes]
Length = 331
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDESCTCFVRDGKTYCKRDY 71
>gi|195115252|ref|XP_002002178.1| GI17237 [Drosophila mojavensis]
gi|193912753|gb|EDW11620.1| GI17237 [Drosophila mojavensis]
Length = 449
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+CG C I DR++L+V + ++H C+ C EC L CF R +L+C+ D+ R
Sbjct: 41 KCGGCHELILDRFILKVLERTWHAKCLQCSECHAQLNDKCFARNGQLFCKEDFFKR 96
>gi|56185681|gb|AAV84105.1| apterous [Euprymna scolopes]
Length = 423
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
C CG IT+RY L VA+ ++H NC+ C EC +L SC+ R YCR DY
Sbjct: 92 CAGCGDLITERYYLNVANNAWHFNCLKCYECKSTLDTERSCYERMGNYYCRDDY 145
>gi|47225657|emb|CAG08000.1| unnamed protein product [Tetraodon nigroviridis]
Length = 363
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+C C + I D+++L+V D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 4 QCAGCSQHILDKFILKVLDRHWHSKCLKCADCQTPLADKCFSRAGSVYCKEDFFKR 59
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC---FTRENKLYCRSDYDSR 61
+C SC + I ++R A D YH +C AC+ C LA + +L C+ DY++
Sbjct: 63 KCASCQKGIPPMQVVRKAQDFVYHLHCFACIMCSRQLATGDEFYLMEDGRLVCKVDYEAA 122
Query: 62 KK 63
K+
Sbjct: 123 KQ 124
>gi|195398039|ref|XP_002057632.1| GJ17996 [Drosophila virilis]
gi|194141286|gb|EDW57705.1| GJ17996 [Drosophila virilis]
Length = 545
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+CG C I DR++L+V + ++H C+ C EC L CF R +L+C+ D+ R
Sbjct: 125 KCGGCHELILDRFILKVLERTWHAKCLQCSECHAQLNDKCFARNGQLFCKEDFFKR 180
>gi|340710497|ref|XP_003393824.1| PREDICTED: LIM domain only protein 3-like [Bombus terrestris]
Length = 249
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRSDY 58
EC CG+ IT+RYLL+ D+ +HE+C+ C C L S FTR N + C+ DY
Sbjct: 19 ECAGCGKAITERYLLKAMDLFWHEDCLKCGCCDCRLGEVGSSLFTRANLILCKRDY 74
>gi|355746127|gb|EHH50752.1| hypothetical protein EGM_01626, partial [Macaca fascicularis]
Length = 364
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+ R
Sbjct: 3 QCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFKR 58
>gi|195164566|ref|XP_002023117.1| GL21131 [Drosophila persimilis]
gi|194105202|gb|EDW27245.1| GL21131 [Drosophila persimilis]
Length = 490
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+CG C I DR++L+V + ++H C+ C EC L CF R +L+C+ D+ R
Sbjct: 97 KCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKR 152
>gi|198473411|ref|XP_001356286.2| GA10505 [Drosophila pseudoobscura pseudoobscura]
gi|198139444|gb|EAL33349.2| GA10505 [Drosophila pseudoobscura pseudoobscura]
Length = 491
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+CG C I DR++L+V + ++H C+ C EC L CF R +L+C+ D+ R
Sbjct: 98 KCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKR 153
>gi|346223350|dbj|BAK78926.1| arrowhead PB [Bombyx mori]
Length = 105
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 5 KECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSRK 62
+ C +CG PI DR+LL V ++H C+ C C L SCF R+ ++YC+ DY +
Sbjct: 6 RTCCACGEPIADRFLLEVGGAAWHTGCLRCCVCAVQLDRHPSCFLRDRQVYCKQDYANDV 65
Query: 63 KG 64
+G
Sbjct: 66 QG 67
>gi|281354363|gb|EFB29947.1| hypothetical protein PANDA_009642 [Ailuropoda melanoleuca]
Length = 365
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+ R
Sbjct: 4 QCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFKR 59
>gi|120537751|gb|AAI29375.1| Lhx4 protein [Danio rerio]
Length = 244
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDS 60
+ + +C C + I D+++L+V D +H C+ C +C LA CF+R +YC+ D+
Sbjct: 25 LQQIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCHALLADKCFSRAGNVYCKEDFFK 84
Query: 61 R 61
R
Sbjct: 85 R 85
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 ECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDSR 61
+C SC + I ++R A D YH +C ACV C LA + +L C+ DY++
Sbjct: 89 KCASCQQGIPPTQVVRKAQDFVYHLHCFACVMCSRQLATGDEFYLMEDGRLVCKEDYETA 148
Query: 62 KK 63
K+
Sbjct: 149 KQ 150
>gi|47207847|emb|CAF94375.1| unnamed protein product [Tetraodon nigroviridis]
Length = 188
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SCG+ I DRYLL+V D+ +H C++C C SL SC+ +E +++C+ DY R
Sbjct: 59 CTSCGQDIVDRYLLKVNDLCWHVRCLSCTVCKTSLGRHVSCYIKEKQVFCKLDYFRR 115
>gi|225581041|gb|ACN94618.1| GA10505 [Drosophila miranda]
Length = 499
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+CG C I DR++L+V + ++H C+ C EC L CF R +L+C+ D+ R
Sbjct: 97 KCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKR 152
>gi|241688853|ref|XP_002411721.1| LIM domain containing protein [Ixodes scapularis]
gi|215504541|gb|EEC14035.1| LIM domain containing protein [Ixodes scapularis]
Length = 173
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG PI D+Y+LRVA D+ +H C+ C +C L +CF R+ K YC+ DY
Sbjct: 27 CVGCGAPIRDQYILRVAPDLEWHAACLKCADCQQFLDETCTCFVRDGKTYCKRDY 81
>gi|350427422|ref|XP_003494753.1| PREDICTED: LIM domain only protein 3-like [Bombus impatiens]
Length = 249
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRSDY 58
EC CG+ IT+RYLL+ D+ +HE+C+ C C L S FTR N + C+ DY
Sbjct: 19 ECAGCGKAITERYLLKAMDLFWHEDCLKCGCCDCRLGEVGSSLFTRANLILCKRDY 74
>gi|334311482|ref|XP_001364897.2| PREDICTED: LIM/homeobox protein Lhx6 [Monodelphis domestica]
Length = 391
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 98 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 154
>gi|281349042|gb|EFB24626.1| hypothetical protein PANDA_015045 [Ailuropoda melanoleuca]
Length = 329
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 3 PGTAMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 62
>gi|194758653|ref|XP_001961576.1| GF14867 [Drosophila ananassae]
gi|190615273|gb|EDV30797.1| GF14867 [Drosophila ananassae]
Length = 550
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 MKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
+ C CG I D+Y+LRVA D+ +H C+ C EC L SC F R+ K YC+ DY
Sbjct: 53 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 110
>gi|301760410|ref|XP_002916006.1| PREDICTED: LIM/homeobox protein Lhx6-like [Ailuropoda melanoleuca]
Length = 390
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 97 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 153
>gi|300797193|ref|NP_001179777.1| LIM/homeobox protein Lhx6 [Bos taurus]
gi|296482368|tpg|DAA24483.1| TPA: LIM homeobox 6 isoform 1 [Bos taurus]
Length = 392
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 155
>gi|341925954|dbj|BAK53866.1| insulin gene enhancer protein isl-1 [Dugesia japonica]
Length = 517
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
C CG ITD+++LRV D+ +H C+ CV+C L ++CF ++ K YC+ DY
Sbjct: 28 CVGCGGAITDKFILRVQPDLEWHARCLRCVKCNRGLDEKNTCFVKDGKTYCKEDY 82
>gi|449266486|gb|EMC77539.1| LIM/homeobox protein Lhx4, partial [Columba livia]
Length = 236
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+ R
Sbjct: 4 QCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFKR 59
>gi|449268595|gb|EMC79451.1| LIM/homeobox protein Lhx2 [Columba livia]
Length = 416
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSRKKG 64
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R G
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY-YRGGG 111
Query: 65 ----SQLVTVLFYSMY 76
L+ VLFY +
Sbjct: 112 MHLSPSLLAVLFYRRF 127
>gi|332832786|ref|XP_001135172.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Pan troglodytes]
Length = 392
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 155
>gi|296482369|tpg|DAA24484.1| TPA: LIM homeobox 6 isoform 2 [Bos taurus]
Length = 377
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 155
>gi|134284359|ref|NP_055183.2| LIM/homeobox protein Lhx6 isoform 1 [Homo sapiens]
gi|297685270|ref|XP_002820218.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Pongo abelii]
gi|221042862|dbj|BAH13108.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 155
>gi|395824115|ref|XP_003785316.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Otolemur garnettii]
Length = 392
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 155
>gi|297270222|ref|XP_001089041.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Macaca mulatta]
Length = 392
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 155
>gi|134284361|ref|NP_954629.2| LIM/homeobox protein Lhx6 isoform 2 [Homo sapiens]
gi|297685272|ref|XP_002820219.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Pongo abelii]
Length = 377
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 155
>gi|308097158|gb|ADO14133.1| ISL1 transcription factor [Notophthalmus viridescens]
Length = 349
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDY 71
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 18 YLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRKKGS 65
+++R YH C +CV C L RE+ L+CR+D+D ++ S
Sbjct: 91 FVMRARSKVYHIECFSCVACSRQLIPGDEFALREDGLFCRADHDVVERAS 140
>gi|2285798|dbj|BAA21649.1| LIM-homeodomain protein [Mus musculus]
Length = 426
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYD 59
P C SCG I D+YLL+V D+ +H C++C C SL SC+ ++ ++C+ DY
Sbjct: 150 PGKCVCSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYF 209
Query: 60 SR 61
R
Sbjct: 210 RR 211
>gi|2149584|gb|AAC53336.1| LIM-homeobox protein [Mus musculus]
Length = 190
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I D+++L+V D +H +C+ C +C LA CF+R +YC+ D+ R
Sbjct: 1 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFKR 55
>gi|395824117|ref|XP_003785317.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Otolemur garnettii]
Length = 377
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 155
>gi|297270224|ref|XP_001088818.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Macaca mulatta]
Length = 377
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 155
>gi|45382271|ref|NP_990745.1| insulin gene enhancer protein ISL-1 [Gallus gallus]
gi|1708560|sp|P50211.1|ISL1_CHICK RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|531179|gb|AAA62171.1| amino acid feature: LIM1, bp 331 .. 483; amino acid feature:
LIM2, bp 517 .. 669; amino acid feature: homeodomain,
bp 820 .. 999 [Gallus gallus]
Length = 349
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDY 71
>gi|397496393|ref|XP_003819022.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein
ISL-2 [Pan paniscus]
Length = 357
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTAMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|395510266|ref|XP_003759400.1| PREDICTED: insulin gene enhancer protein ISL-1 isoform 2
[Sarcophilus harrisii]
Length = 354
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDY 71
>gi|9994171|ref|NP_065204.1| insulin gene enhancer protein ISL-2 [Rattus norvegicus]
gi|1708563|sp|P50480.1|ISL2_RAT RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|531218|gb|AAA62161.1| amino acid feature: homeodomain, bp 647 .. 826; amino acid
feature: LIM1, bp 155 .. 307; amino acid feature: LIM2,
bp 341 .. 493 [Rattus norvegicus]
Length = 360
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTAMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|351702111|gb|EHB05030.1| LIM/homeobox protein Lhx2 [Heterocephalus glaber]
Length = 502
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 165 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 221
>gi|241999338|ref|XP_002434312.1| lhx4, putative [Ixodes scapularis]
gi|215496071|gb|EEC05712.1| lhx4, putative [Ixodes scapularis]
Length = 79
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 12 RPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
+PI DR++L+V + S+H C+ C +C LA+ CF R +YC+ D+
Sbjct: 31 QPILDRFILKVLERSWHARCLKCADCQAQLANKCFARNGHVYCKDDF 77
>gi|126315044|ref|XP_001365199.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Monodelphis
domestica]
gi|395510264|ref|XP_003759399.1| PREDICTED: insulin gene enhancer protein ISL-1 isoform 1
[Sarcophilus harrisii]
Length = 349
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDY 71
>gi|327262855|ref|XP_003216239.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Anolis
carolinensis]
Length = 349
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDY 71
>gi|402896489|ref|XP_003911330.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx6 [Papio
anubis]
Length = 390
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 155
>gi|224090443|ref|XP_002197098.1| PREDICTED: insulin gene enhancer protein ISL-1 [Taeniopygia
guttata]
Length = 349
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDY 71
>gi|194879942|ref|XP_001974333.1| GG21675 [Drosophila erecta]
gi|190657520|gb|EDV54733.1| GG21675 [Drosophila erecta]
Length = 534
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 MKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
+ C CG I D+Y+LRVA D+ +H C+ C EC L SC F R+ K YC+ DY
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 108
>gi|195484275|ref|XP_002090625.1| GE12696 [Drosophila yakuba]
gi|194176726|gb|EDW90337.1| GE12696 [Drosophila yakuba]
Length = 540
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 MKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
+ C CG I D+Y+LRVA D+ +H C+ C EC L SC F R+ K YC+ DY
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 108
>gi|1708558|sp|P50212.1|ISL2B_ONCTS RecName: Full=Insulin gene enhancer protein ISL-2B;
Short=Islet-2B
gi|64209|emb|CAA46102.1| isl-1 [Oncorhynchus tshawytscha]
gi|1094403|prf||2106150A LIM domain homeobox protein
Length = 340
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRVA D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 9 CVGCGSQIHDQYILRVAPDLEWHAACLKCSECSQYLDETCTCFVRDGKTYCKRDY 63
>gi|270004863|gb|EFA01311.1| arrowhead [Tribolium castaneum]
Length = 349
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C +CG PI+D++LL V+ S+H C+ C C L SCF R+ +YC++DY
Sbjct: 69 CSACGEPISDKFLLEVSGRSWHARCLRCCVCQLQLDRQPSCFIRDRAIYCKADY 122
>gi|48095039|ref|XP_394342.1| PREDICTED: LIM domain only protein 3-like [Apis mellifera]
Length = 218
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 5 KECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRSDY 58
+ECG CG IT+RYLL+V D+ +HE+C+ C C L S + + N + C+ DY
Sbjct: 16 RECGGCGEVITERYLLKVLDMFWHEDCLKCNSCNCRLVEAGPSLYIKSNLILCKKDY 72
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 11/75 (14%)
Query: 7 CGSCGRPITD-RYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRKK 63
C +C + I ++R YH C AC +C + F ENK+ C SDY+ R
Sbjct: 82 CAACNKTIPAFEMVMRARTNVYHLECFACQQCNYRFCVGDKFFLCENKILCESDYEER-- 139
Query: 64 GSQLVTVLFYSMYVH 78
++F +M VH
Sbjct: 140 ------LVFANMAVH 148
>gi|193634208|ref|XP_001949623.1| PREDICTED: LIM domain only protein 3-like [Acyrthosiphon pisum]
Length = 250
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 5 KECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRSDY 58
+EC CG+ ITDR+LL+ D+ +HE+C+ C CG L + +T+ N + C+ DY
Sbjct: 31 QECAGCGKHITDRFLLKALDLFWHEDCLMCGCCGCRLGEVGSTLYTKANMILCKKDY 87
>gi|312371800|gb|EFR19896.1| hypothetical protein AND_21634 [Anopheles darlingi]
Length = 295
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
++ C +CG PI+D++LL V S+H C+ C C L SC+ R+ ++YC++DY
Sbjct: 236 ELRSCTACGEPISDKFLLDVGGCSWHSACLRCCICHTPLDQQPSCYVRDRQIYCKTDY 293
>gi|17136568|ref|NP_476775.1| tailup, isoform A [Drosophila melanogaster]
gi|195580000|ref|XP_002079844.1| GD21801 [Drosophila simulans]
gi|7298500|gb|AAF53720.1| tailup, isoform A [Drosophila melanogaster]
gi|194191853|gb|EDX05429.1| GD21801 [Drosophila simulans]
Length = 534
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 MKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
+ C CG I D+Y+LRVA D+ +H C+ C EC L SC F R+ K YC+ DY
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 108
>gi|195344936|ref|XP_002039032.1| GM17053 [Drosophila sechellia]
gi|194134162|gb|EDW55678.1| GM17053 [Drosophila sechellia]
Length = 534
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 MKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
+ C CG I D+Y+LRVA D+ +H C+ C EC L SC F R+ K YC+ DY
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 108
>gi|1895062|gb|AAB49892.1| LIM homeobox protein [Drosophila melanogaster]
Length = 534
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 MKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
+ C CG I D+Y+LRVA D+ +H C+ C EC L SC F R+ K YC+ DY
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 108
>gi|51571947|ref|NP_001003980.1| LIM/homeobox protein Lhx8 [Danio rerio]
gi|50953779|gb|AAT90496.1| Lhx7 [Danio rerio]
gi|108742021|gb|AAI17602.1| LIM homeobox 8 [Danio rerio]
Length = 332
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSRKKG 64
C SCG I D+YLL+V D+ +H C++C C SL SC+ +E +++C+ DY RK G
Sbjct: 51 CTSCGTEIVDKYLLKVNDMCWHVRCLSCSVCQTSLGRHISCYIKEKEIFCKLDY-FRKYG 109
Query: 65 SQ 66
++
Sbjct: 110 TR 111
>gi|426362927|ref|XP_004048601.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Gorilla gorilla
gorilla]
Length = 384
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 92 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 148
>gi|149041730|gb|EDL95571.1| insulin related protein 2 (islet 2) [Rattus norvegicus]
Length = 359
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTAMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|410978997|ref|XP_003995873.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Felis catus]
Length = 404
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 88 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 144
>gi|397526998|ref|XP_003833397.1| PREDICTED: LIM/homeobox protein Lhx6 [Pan paniscus]
Length = 377
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 84 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 140
>gi|157119548|ref|XP_001659418.1| lim homeobox protein [Aedes aegypti]
gi|108875286|gb|EAT39511.1| AAEL008685-PA [Aedes aegypti]
Length = 345
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 5 KECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
++C CG I DRY L VAD ++H C+ C +C +L SC+ RE +YC+ DY
Sbjct: 14 EKCAGCGISIRDRYYLLVADRAWHNQCLRCCKCLANLETELSCYAREGNIYCKDDY 69
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 5 KECGSCGRPITDRYL-LRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDS 60
+ C CG I+ L +R D+ +H NC +C CG L + R+ +++C YD+
Sbjct: 76 RRCARCGSGISASELVMRAKDLIFHVNCFSCTICGQLLRGGDTAGIRDGRIFCGEHYDT 134
>gi|12851555|dbj|BAB29088.1| unnamed protein product [Mus musculus]
Length = 359
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTAMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|291410745|ref|XP_002721643.1| PREDICTED: ISL LIM homeobox 2 [Oryctolagus cuniculus]
Length = 359
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTAMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|348555669|ref|XP_003463646.1| PREDICTED: insulin gene enhancer protein ISL-2-like [Cavia
porcellus]
Length = 371
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTAMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|344271983|ref|XP_003407816.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Loxodonta africana]
Length = 377
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 155
>gi|344271981|ref|XP_003407815.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Loxodonta africana]
Length = 392
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 155
>gi|508712|gb|AAB08752.1| LIM-homeobox domain protein [Homo sapiens]
Length = 423
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
CG CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 52 CGGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 108
>gi|395822580|ref|XP_003784594.1| PREDICTED: insulin gene enhancer protein ISL-2 [Otolemur
garnettii]
Length = 359
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTAMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|154146254|ref|NP_081673.2| insulin gene enhancer protein ISL-2 [Mus musculus]
gi|408360153|sp|Q9CXV0.2|ISL2_MOUSE RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|148693907|gb|EDL25854.1| insulin related protein 2 (islet 2) [Mus musculus]
gi|183396835|gb|AAI65972.1| Insulin related protein 2 (islet 2) [synthetic construct]
Length = 359
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTAMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|426248250|ref|XP_004017877.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein
ISL-2 [Ovis aries]
Length = 366
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTAMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|296236843|ref|XP_002763501.1| PREDICTED: insulin gene enhancer protein ISL-2 [Callithrix
jacchus]
Length = 359
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTAMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|348535176|ref|XP_003455077.1| PREDICTED: LIM/homeobox protein Lhx2-like [Oreochromis niloticus]
Length = 417
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CGR I DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 74 CAGCGRKIADRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 127
>gi|348505840|ref|XP_003440468.1| PREDICTED: insulin gene enhancer protein isl-2a-like [Oreochromis
niloticus]
Length = 359
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECNQHLDETCTCFVRDGKTYCKRDY 81
>gi|332844416|ref|XP_003314842.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Pan
troglodytes]
gi|426379890|ref|XP_004056620.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Gorilla
gorilla gorilla]
Length = 360
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTAMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|258645165|ref|NP_001158279.1| tailup [Tribolium castaneum]
Length = 431
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 MKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
+ C CG I D+Y+LRVA D+ +H C+ C EC L SC F R+ K YC+ DY
Sbjct: 47 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 104
>gi|296475432|tpg|DAA17547.1| TPA: ISL LIM homeobox 2 [Bos taurus]
gi|440909295|gb|ELR59218.1| Insulin enhancer protein ISL-2 [Bos grunniens mutus]
Length = 359
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTAMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|410960782|ref|XP_003986966.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein
ISL-2 [Felis catus]
Length = 354
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTAMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|21956641|ref|NP_665804.1| insulin gene enhancer protein ISL-2 [Homo sapiens]
gi|114658283|ref|XP_001147206.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Pan
troglodytes]
gi|297697192|ref|XP_002825752.1| PREDICTED: insulin gene enhancer protein ISL-2 [Pongo abelii]
gi|426379888|ref|XP_004056619.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Gorilla
gorilla gorilla]
gi|20978495|sp|Q96A47.1|ISL2_HUMAN RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|15080438|gb|AAH11967.1| ISL LIM homeobox 2 [Homo sapiens]
gi|15082435|gb|AAH12136.1| ISL LIM homeobox 2 [Homo sapiens]
gi|119619626|gb|EAW99220.1| ISL2 transcription factor, LIM/homeodomain, (islet-2) [Homo
sapiens]
gi|167773881|gb|ABZ92375.1| ISL LIM homeobox 2 [synthetic construct]
gi|193785483|dbj|BAG50849.1| unnamed protein product [Homo sapiens]
Length = 359
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTAMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|149691761|ref|XP_001490268.1| PREDICTED: insulin gene enhancer protein ISL-2 [Equus caballus]
Length = 359
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTAMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|324516282|gb|ADY46481.1| Homeobox protein ceh-14 [Ascaris suum]
Length = 324
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
CG C PI DRYLL+V D SYH C+ C C L C+ + + +C+ + R
Sbjct: 19 CGKCEEPIRDRYLLKVLDRSYHTQCLRCTHCEQPLTSKCYLKGGQPFCKDHFYKR 73
>gi|109081997|ref|XP_001105068.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Macaca
mulatta]
Length = 359
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTAMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|300795417|ref|NP_001178166.1| insulin gene enhancer protein ISL-2 [Bos taurus]
Length = 359
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTAMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|270011029|gb|EFA07477.1| tailup [Tribolium castaneum]
Length = 411
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 MKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
+ C CG I D+Y+LRVA D+ +H C+ C EC L SC F R+ K YC+ DY
Sbjct: 23 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 80
>gi|431920332|gb|ELK18367.1| Insulin protein enhancer protein ISL-2 [Pteropus alecto]
Length = 306
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 26 PGTATCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 85
>gi|183985542|gb|AAI66037.1| isl1 protein [Xenopus (Silurana) tropicalis]
Length = 335
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 71
>gi|17136566|ref|NP_476774.1| tailup, isoform B [Drosophila melanogaster]
gi|5052638|gb|AAD38649.1|AF145674_1 tailup [Drosophila melanogaster]
gi|22946785|gb|AAN11018.1| tailup, isoform B [Drosophila melanogaster]
gi|220942306|gb|ACL83696.1| tup-PB [synthetic construct]
gi|220952524|gb|ACL88805.1| tup-PB [synthetic construct]
Length = 465
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 MKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
+ C CG I D+Y+LRVA D+ +H C+ C EC L SC F R+ K YC+ DY
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 108
>gi|1708565|sp|P53409.1|ISL3_ONCTS RecName: Full=Insulin gene enhancer protein ISL-3; Short=Islet-3
Length = 363
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|332229917|ref|XP_003264133.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Nomascus
leucogenys]
Length = 376
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 155
>gi|307166312|gb|EFN60494.1| LIM/homeobox protein Lhx9 [Camponotus floridanus]
Length = 487
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
++ G CGR I +R+ LR AD ++H C+ C C LA +CF R+ +YC+ DY
Sbjct: 134 VRGWGGCGREIAERWYLRAADRAWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDY 190
>gi|241753309|ref|XP_002401118.1| lim homeobox protein, putative [Ixodes scapularis]
gi|215508343|gb|EEC17797.1| lim homeobox protein, putative [Ixodes scapularis]
Length = 357
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 5 KECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
K C +CG PI DR+ L + +H +C+ C C L +CF R+ +YC+ DY SR
Sbjct: 36 KLCAACGAPIADRFYLLAVERQWHTHCLRCCHCKQQLDSELTCFARDGNIYCKEDYYSR 94
>gi|126272190|ref|XP_001362509.1| PREDICTED: insulin gene enhancer protein ISL-2 [Monodelphis
domestica]
Length = 359
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P + C CG I D+Y+L+V+ D+ +H C+ C EC L +C F R K YC+ DY
Sbjct: 22 PGIAMCVGCGSQIHDQYILKVSPDLEWHAACLKCAECSQYLDETCTCFVRNGKTYCKRDY 81
>gi|432861700|ref|XP_004069695.1| PREDICTED: insulin gene enhancer protein isl-2a-like [Oryzias
latipes]
Length = 358
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDY 81
>gi|410924249|ref|XP_003975594.1| PREDICTED: LIM/homeobox protein Lhx8-like [Takifugu rubripes]
Length = 338
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C SC + I DRYLL+V D+ +H C++C C SL SC+ +E +++C+ DY
Sbjct: 58 CTSCNKDIVDRYLLKVNDLCWHVRCLSCTVCKTSLGRHVSCYIKEKQVFCKLDY 111
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 7 CGSCGRPI-TDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYD 59
C CGR I + ++ RV ++H C +C C L C EN+++CR Y+
Sbjct: 119 CTRCGRNINSSDWVRRVRGSTFHLACFSCSSCKRQLSTGEECGLLENRVFCRPHYE 174
>gi|426222898|ref|XP_004005617.1| PREDICTED: LIM/homeobox protein Lhx3 [Ovis aries]
Length = 401
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 10 CGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C +PI DR+ L+ +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 37 CAQPILDRFTLKALGRHWHSKCLKCSDCHAPLAERCFSRGESVYCKDDFFKR 88
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 92 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 150
Query: 61 RKK 63
K+
Sbjct: 151 AKQ 153
>gi|829167|emb|CAA38240.1| lin-11 protein [Caenorhabditis elegans]
gi|226840|prf||1608206A lin-11 gene
Length = 382
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
EC +C +PI DRY+ V +H++C+ C +C ++ +CF+R+ + C++D+ R
Sbjct: 44 ECAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSMTCFSRDGLILCKTDFSRR 99
>gi|196013287|ref|XP_002116505.1| hypothetical protein TRIADDRAFT_30944 [Trichoplax adhaerens]
gi|190581096|gb|EDV21175.1| hypothetical protein TRIADDRAFT_30944 [Trichoplax adhaerens]
Length = 265
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
C CG I DRY+L+VA D+ YH C+ C C L +CF R K YC+SD+
Sbjct: 17 CSGCGGKINDRYILQVAPDMQYHAACLKCASCQQLLDEKETCFLRNGKPYCKSDF 71
>gi|308485364|ref|XP_003104881.1| CRE-LIN-11 protein [Caenorhabditis remanei]
gi|308257579|gb|EFP01532.1| CRE-LIN-11 protein [Caenorhabditis remanei]
Length = 415
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSRKKG 64
EC +C +PI DRY+ V +H++C+ C +C ++ +CF+++ + C++DY SR+ G
Sbjct: 77 ECAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSMTCFSKDGLILCKTDY-SRRYG 134
>gi|17508255|ref|NP_492696.1| Protein LIN-11 [Caenorhabditis elegans]
gi|2506818|sp|P20154.2|LIN11_CAEEL RecName: Full=Protein lin-11; AltName: Full=Abnormal cell lineage
protein 11
gi|3881427|emb|CAB02310.1| Protein LIN-11 [Caenorhabditis elegans]
Length = 405
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
EC +C +PI DRY+ V +H++C+ C +C ++ +CF+R+ + C++D+ R
Sbjct: 67 ECAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSMTCFSRDGLILCKTDFSRR 122
>gi|379698940|ref|NP_001243941.1| arrowhead PA [Bombyx mori]
gi|346223348|dbj|BAK78925.1| arrowhead PA [Bombyx mori]
Length = 274
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 5 KECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
+ C +CG PI DR+LL V ++H C+ C C L SCF R+ ++YC+ DY
Sbjct: 6 RTCCACGEPIADRFLLEVGGAAWHTGCLRCCVCAVQLDRHPSCFLRDRQVYCKQDY 61
>gi|91078266|ref|XP_971202.1| PREDICTED: similar to GA10520-PA [Tribolium castaneum]
Length = 343
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C +CG PI+D++LL V+ S+H C+ C C L SCF R+ +YC++DY
Sbjct: 83 CSACGEPISDKFLLEVSGRSWHARCLRCCVCQLQLDRQPSCFIRDRAIYCKADY 136
>gi|410929509|ref|XP_003978142.1| PREDICTED: LIM/homeobox protein Lhx2-like [Takifugu rubripes]
Length = 417
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CGR I DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 74 CAGCGRKIVDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 130
>gi|18858907|ref|NP_571045.1| insulin gene enhancer protein isl-2a [Danio rerio]
gi|1708561|sp|P53406.1|ISL2A_DANRE RecName: Full=Insulin gene enhancer protein isl-2a;
Short=Islet-2A; AltName: Full=Insulin gene enhancer
protein isl-2; Short=Islet-2
gi|871001|emb|CAA61283.1| Islet-2 protein [Danio rerio]
gi|1037166|dbj|BAA07484.1| zfIsl-2 [Danio rerio]
gi|190336908|gb|AAI62631.1| Islet2a [Danio rerio]
gi|190339440|gb|AAI62833.1| Islet2a [Danio rerio]
Length = 359
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|170053181|ref|XP_001862556.1| insulin protein enhancer protein isl [Culex quinquefasciatus]
gi|167873811|gb|EDS37194.1| insulin protein enhancer protein isl [Culex quinquefasciatus]
Length = 438
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRVA D+ +H C+ C EC L SC F R+ K YC+ DY
Sbjct: 27 CVGCGTQIHDQYILRVAPDLEWHAACLKCQECHQFLDESCTCFVRDGKTYCKRDY 81
>gi|432876050|ref|XP_004072952.1| PREDICTED: LIM/homeobox protein Lhx2-like [Oryzias latipes]
Length = 380
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CGR I DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 74 CAGCGRKIADRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 130
>gi|332029130|gb|EGI69141.1| LIM/homeobox protein Awh [Acromyrmex echinatior]
Length = 292
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYD 59
ECG CG + +R +L V ++H C+ C C L HSCF R ++YCR DYD
Sbjct: 2 ECGGCGERVRERTILCVGGRTWHSRCLRCSACARPLHDQHSCFQRGMRVYCRHDYD 57
>gi|50253600|gb|AAT72002.1| isl1, partial [Xenopus (Silurana) tropicalis]
Length = 268
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 71
>gi|268567057|ref|XP_002639879.1| C. briggsae CBR-LIN-11 protein [Caenorhabditis briggsae]
Length = 411
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSRKKG 64
EC +C +PI DRY+ V +H++C+ C +C ++ +CF+++ + C++DY SR+ G
Sbjct: 74 ECAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSMTCFSKDGLILCKTDY-SRRYG 131
>gi|195119850|ref|XP_002004442.1| GI19612 [Drosophila mojavensis]
gi|193909510|gb|EDW08377.1| GI19612 [Drosophila mojavensis]
Length = 485
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
N +C CGR I DR+ L + +H +C+ C C L SC++R+ +YC++DY
Sbjct: 159 NPDDCAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDY 216
>gi|157119485|ref|XP_001653405.1| insulinprotein enhancer protein isl [Aedes aegypti]
gi|108883188|gb|EAT47413.1| AAEL001500-PA, partial [Aedes aegypti]
Length = 398
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRVA D+ +H C+ C EC L SC F R+ K YC+ DY
Sbjct: 7 CVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 61
>gi|431921900|gb|ELK19103.1| LIM/homeobox protein Lhx9 [Pteropus alecto]
Length = 479
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 153 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 209
>gi|403307414|ref|XP_003944190.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 388
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 118
>gi|31077136|ref|NP_852032.1| LIM/homeobox protein Lhx9 [Rattus norvegicus]
gi|81895227|sp|Q80W90.1|LHX9_RAT RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|30525882|gb|AAP32472.1| LIM-homeodomain type transcription factor Lhx9 [Rattus norvegicus]
Length = 388
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 118
>gi|149743835|ref|XP_001492921.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Equus caballus]
Length = 388
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 118
>gi|345317972|ref|XP_003429957.1| PREDICTED: hypothetical protein LOC100681317 [Ornithorhynchus
anatinus]
Length = 217
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C + I DR++L+V D +H C+ C +C L CF+R + +YC+ D+
Sbjct: 164 CAGCNQHIVDRFILKVLDRHWHGKCLKCSDCQTPLTEKCFSRGDSVYCKEDF 215
>gi|410979132|ref|XP_003995940.1| PREDICTED: LIM/homeobox protein Lhx2 [Felis catus]
Length = 484
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 12 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 68
>gi|291402696|ref|XP_002717724.1| PREDICTED: LIM homeobox protein 9-like isoform 2 [Oryctolagus
cuniculus]
Length = 388
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 118
>gi|237512911|dbj|BAA07578.2| LIM homeodomain protein Hr-Lhx3 a-form [Halocynthia roretzi]
Length = 690
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
+C C I DR++L+V D +H C+ C +C L+ CF+R N ++C+ D+ R
Sbjct: 281 KCTGCEHRIFDRFILKVQDKPWHSQCLKCNDCSAQLSEKCFSRGNLVFCKDDFFKR 336
>gi|158299279|ref|XP_319393.4| AGAP010209-PA [Anopheles gambiae str. PEST]
gi|157014289|gb|EAA13793.5| AGAP010209-PA [Anopheles gambiae str. PEST]
Length = 451
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRVA D+ +H C+ C EC L SC F R+ K YC+ DY
Sbjct: 56 CVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 110
>gi|296230329|ref|XP_002760660.1| PREDICTED: LIM/homeobox protein Lhx9 [Callithrix jacchus]
Length = 388
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 118
>gi|358332841|dbj|GAA31344.2| LIM/homeobox protein Lhx5 [Clonorchis sinensis]
Length = 455
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYD 59
C C PI D YL R+ ++HE C C C L+ CF E +L CR DYD
Sbjct: 115 CIRCRDPIMDHYLFRIRGQAWHEACAVCSVCNVKLSDVCFVHEGQLLCRKDYD 167
>gi|170039913|ref|XP_001847762.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167863504|gb|EDS26887.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 174
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRSDYDS 60
+K C CG IT+R+ L D +H NC+ C CG LA SC+TR + C+ DY S
Sbjct: 81 VKHCAGCGGKITERFFLHALDRYWHNNCLKCSCCGAMLADIGSSCYTRSGMILCKGDYSS 140
>gi|71361857|gb|AAZ30032.1| LIM homeodomain protein, partial [Gallus gallus]
Length = 235
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL HSC+ + +++C+ DY SR
Sbjct: 30 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQHSCYIKNKEIFCKMDYFSR 86
>gi|380013153|ref|XP_003690632.1| PREDICTED: LIM/homeobox protein Awh-like [Apis florea]
Length = 332
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 1 MP-NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSD 57
MP N+ ECG CG + +R +L V ++H C+ C C L HSCF + +LYCR D
Sbjct: 35 MPANVMECGGCGERVRERTVLCVGGRTWHSRCLRCFACARPLHDQHSCFLKGMRLYCRHD 94
Query: 58 Y 58
Y
Sbjct: 95 Y 95
>gi|328708271|ref|XP_001949712.2| PREDICTED: LIM/homeobox protein Awh-like [Acyrthosiphon pisum]
Length = 346
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
+C C PITDR+LL+V+D +H +C+ C C L SCF +++ +YCR DY
Sbjct: 60 QCRGCSDPITDRFLLKVSDKIWHVSCLRCCVCNLVLEDEPSCFIKDDSIYCRQDY 114
>gi|4530371|gb|AAD22008.1| LIM homeobox protein 9 [Mus musculus]
Length = 378
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 108
>gi|344276912|ref|XP_003410249.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Loxodonta africana]
Length = 388
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 118
>gi|444717046|gb|ELW57882.1| LIM/homeobox protein Lhx9 [Tupaia chinensis]
Length = 378
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 108
>gi|348578262|ref|XP_003474902.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Cavia
porcellus]
Length = 388
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 118
>gi|410986202|ref|XP_003999401.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Felis catus]
Length = 388
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 118
>gi|258504095|gb|ACV72753.1| LIN-11 [Caenorhabditis remanei]
gi|258504097|gb|ACV72754.1| LIN-11 [Caenorhabditis remanei]
gi|258504103|gb|ACV72757.1| LIN-11 [Caenorhabditis remanei]
gi|258504107|gb|ACV72759.1| LIN-11 [Caenorhabditis remanei]
gi|258504109|gb|ACV72760.1| LIN-11 [Caenorhabditis remanei]
gi|258504111|gb|ACV72761.1| LIN-11 [Caenorhabditis remanei]
gi|258504117|gb|ACV72764.1| LIN-11 [Caenorhabditis remanei]
gi|258504119|gb|ACV72765.1| LIN-11 [Caenorhabditis remanei]
Length = 383
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSRKKG 64
EC +C +PI DRY+ V +H++C+ C +C ++ +CF+++ + C++DY SR+ G
Sbjct: 62 ECAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSMTCFSKDGLILCKTDY-SRRYG 119
>gi|62241033|ref|NP_001014434.1| LIM/homeobox protein Lhx9 isoform 2 [Homo sapiens]
gi|114571650|ref|XP_525011.2| PREDICTED: LIM/homeobox protein Lhx9 isoform 6 [Pan troglodytes]
gi|297281170|ref|XP_001110674.2| PREDICTED: LIM/homeobox protein Lhx9 isoform 3 [Macaca mulatta]
gi|395729258|ref|XP_002809704.2| PREDICTED: LIM/homeobox protein Lhx9 [Pongo abelii]
gi|397505118|ref|XP_003823120.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Pan paniscus]
gi|402857736|ref|XP_003893401.1| PREDICTED: LIM/homeobox protein Lhx9 [Papio anubis]
gi|426333155|ref|XP_004028150.1| PREDICTED: LIM/homeobox protein Lhx9 [Gorilla gorilla gorilla]
gi|9367761|emb|CAB97493.1| LIM-homeobox 9 [Homo sapiens]
gi|119611697|gb|EAW91291.1| LIM homeobox 9, isoform CRA_e [Homo sapiens]
Length = 388
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 118
>gi|345803062|ref|XP_857156.2| PREDICTED: LIM/homeobox protein Lhx9 isoform 4 [Canis lupus
familiaris]
Length = 380
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 108
>gi|126306413|ref|XP_001367734.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Monodelphis
domestica]
gi|395531043|ref|XP_003767592.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Sarcophilus
harrisii]
Length = 388
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 118
>gi|195402627|ref|XP_002059906.1| apterous [Drosophila virilis]
gi|27374202|gb|AAN87274.1| ap [Drosophila virilis]
gi|194140772|gb|EDW57243.1| apterous [Drosophila virilis]
Length = 472
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
N +C CGR I DR+ L + +H +C+ C C L SC++R+ +YC++DY
Sbjct: 146 NPDDCAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDY 203
>gi|119611694|gb|EAW91288.1| LIM homeobox 9, isoform CRA_b [Homo sapiens]
Length = 378
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 108
>gi|402591685|gb|EJW85614.1| hypothetical protein WUBG_03477, partial [Wuchereria bancrofti]
Length = 103
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSRKK 63
M C C I DRY+ V + ++H +C+ C +C L+ +CFTR+ + CR D+ +R+
Sbjct: 1 MAICAGCNNAILDRYVFHVLEKAWHASCIQCADCKELLSETCFTRDGLILCRKDF-ARRY 59
Query: 64 GSQ 66
G++
Sbjct: 60 GTR 62
>gi|195027475|ref|XP_001986608.1| GH20430 [Drosophila grimshawi]
gi|193902608|gb|EDW01475.1| GH20430 [Drosophila grimshawi]
Length = 469
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
N +C CGR I DR+ L + +H +C+ C C L SC++R+ +YC++DY
Sbjct: 144 NPDDCAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDY 201
>gi|157106396|ref|XP_001649304.1| hypothetical protein AaeL_AAEL014669 [Aedes aegypti]
gi|108868848|gb|EAT33073.1| AAEL014669-PA [Aedes aegypti]
Length = 233
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDS 60
+ EC C PI DR+ L + +H C+ C C +L A+SCF+R+ +YC++DY S
Sbjct: 135 GLDECAGCDMPIQDRFYLSAVERKWHATCLQCCICRQTLEGANSCFSRDGNIYCKTDYYS 194
Query: 61 R 61
+
Sbjct: 195 K 195
>gi|328781496|ref|XP_001121365.2| PREDICTED: LIM/homeobox protein Awh-like [Apis mellifera]
Length = 332
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 1 MP-NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSD 57
MP N+ ECG CG + +R +L V ++H C+ C C L HSCF + +LYCR D
Sbjct: 35 MPANVMECGGCGERVRERTVLCVGGRTWHSRCLRCFACARPLHDQHSCFLKGMRLYCRHD 94
Query: 58 Y 58
Y
Sbjct: 95 Y 95
>gi|258504089|gb|ACV72750.1| LIN-11 [Caenorhabditis remanei]
gi|258504091|gb|ACV72751.1| LIN-11 [Caenorhabditis remanei]
gi|258504093|gb|ACV72752.1| LIN-11 [Caenorhabditis remanei]
gi|258504099|gb|ACV72755.1| LIN-11 [Caenorhabditis remanei]
gi|258504113|gb|ACV72762.1| LIN-11 [Caenorhabditis remanei]
gi|258504115|gb|ACV72763.1| LIN-11 [Caenorhabditis remanei]
Length = 383
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSRKKG 64
EC +C +PI DRY+ V +H++C+ C +C ++ +CF+++ + C++DY SR+ G
Sbjct: 62 ECAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSMTCFSKDGLILCKTDY-SRRYG 119
>gi|158292633|ref|XP_558527.3| AGAP005137-PA [Anopheles gambiae str. PEST]
gi|157017083|gb|EAL40471.3| AGAP005137-PA [Anopheles gambiae str. PEST]
Length = 432
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C CG+ I DRY ++++ D +HE C+ C C L+ +C+T+ K+YC+ DY
Sbjct: 19 CEGCGQKIKDRYFMKLSPDQFWHEQCLLCCICRIQLSQTCYTKNTKVYCKDDY 71
>gi|258504101|gb|ACV72756.1| LIN-11 [Caenorhabditis remanei]
gi|258504105|gb|ACV72758.1| LIN-11 [Caenorhabditis remanei]
Length = 383
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSRKKG 64
EC +C +PI DRY+ V +H++C+ C +C ++ +CF+++ + C++DY SR+ G
Sbjct: 62 ECAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSMTCFSKDGLILCKTDY-SRRYG 119
>gi|260447067|ref|NP_001159513.1| ISL LIM homeobox 2 [Xenopus (Silurana) tropicalis]
gi|257043811|gb|ACV33233.1| islet 2 [Xenopus (Silurana) tropicalis]
Length = 333
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L +CF R+ K YC+ DY
Sbjct: 27 CVGCGSHILDQYILRVSPDLEWHAACLKCAECSQYLDENCTCFVRDGKTYCKRDY 81
>gi|357605400|gb|EHJ64588.1| hypothetical protein KGM_21596 [Danaus plexippus]
Length = 406
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 5 KECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
+ C +CG PI DR+LL V ++H C+ C C L SCF R+ ++YC+ DY
Sbjct: 136 RTCCACGEPIADRFLLEVGGGAWHTGCLRCCVCAVQLDRHPSCFLRDRQVYCKQDY 191
>gi|258504074|gb|ACV72749.1| MEC-3 [Caenorhabditis remanei]
Length = 291
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
+ +C C I DR++ R+ + SYHENCV C C LA CF + ++YC Y
Sbjct: 10 SQNKCNCCNEQIYDRFIYRMDNRSYHENCVKCTICESPLAEKCFWKNGRIYCSQHY 65
>gi|258504052|gb|ACV72738.1| MEC-3 [Caenorhabditis remanei]
gi|258504072|gb|ACV72748.1| MEC-3 [Caenorhabditis remanei]
Length = 291
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
+ +C C I DR++ R+ + SYHENCV C C LA CF + ++YC Y
Sbjct: 10 SQNKCNCCNEQIYDRFIYRMDNRSYHENCVKCTICESPLAEKCFWKNGRIYCSQHY 65
>gi|258504044|gb|ACV72734.1| MEC-3 [Caenorhabditis remanei]
gi|258504062|gb|ACV72743.1| MEC-3 [Caenorhabditis remanei]
Length = 291
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
+ +C C I DR++ R+ + SYHENCV C C LA CF + ++YC Y
Sbjct: 10 SQNKCNCCNEQIYDRFIYRMDNRSYHENCVKCTICESPLAEKCFWKNGRIYCSQHY 65
>gi|258504050|gb|ACV72737.1| MEC-3 [Caenorhabditis remanei]
gi|258504068|gb|ACV72746.1| MEC-3 [Caenorhabditis remanei]
Length = 291
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
+ +C C I DR++ R+ + SYHENCV C C LA CF + ++YC Y
Sbjct: 10 SQNKCNCCNEQIYDRFIYRMDNRSYHENCVKCTICESPLAEKCFWKNGRIYCSQHY 65
>gi|258504048|gb|ACV72736.1| MEC-3 [Caenorhabditis remanei]
gi|258504054|gb|ACV72739.1| MEC-3 [Caenorhabditis remanei]
gi|258504060|gb|ACV72742.1| MEC-3 [Caenorhabditis remanei]
gi|258504066|gb|ACV72745.1| MEC-3 [Caenorhabditis remanei]
Length = 291
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
+ +C C I DR++ R+ + SYHENCV C C LA CF + ++YC Y
Sbjct: 10 SQNKCNCCNEQIYDRFIYRMDNRSYHENCVKCTICESPLAEKCFWKNGRIYCSQHY 65
>gi|228432|prf||1804264A homeobox protein
Length = 320
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
+ +C C I DR++ R+ + SYHENCV C C LA CF + ++YC Y
Sbjct: 25 SQNKCNCCNEQIYDRFIYRMDNRSYHENCVKCTICESPLAEKCFWKNGRIYCSQHY 80
>gi|258504046|gb|ACV72735.1| MEC-3 [Caenorhabditis remanei]
gi|258504056|gb|ACV72740.1| MEC-3 [Caenorhabditis remanei]
Length = 291
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
+ +C C I DR++ R+ + SYHENCV C C LA CF + ++YC Y
Sbjct: 10 SQNKCNCCNEQIYDRFIYRMDNRSYHENCVKCTICESPLAEKCFWKNGRIYCSQHY 65
>gi|403307412|ref|XP_003944189.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 399
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 127
>gi|354485102|ref|XP_003504723.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Cricetulus
griseus]
Length = 397
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 127
>gi|110611159|ref|NP_001036042.1| LIM/homeobox protein Lhx9 isoform c [Mus musculus]
gi|224471884|sp|Q9WUH2.3|LHX9_MOUSE RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
Length = 397
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 127
>gi|348531406|ref|XP_003453200.1| PREDICTED: LIM/homeobox protein Lhx8-like [Oreochromis niloticus]
Length = 386
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C++C C SL SC+ R+ +++C+ DY R
Sbjct: 106 CTSCGLEIVDRYLLKVNNLCWHVRCLSCSVCKTSLGRHVSCYIRDKEVFCKLDYFRR 162
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 7 CGSCGRPI-TDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYD 59
C CGR I + ++ R ++H C +C C L C EN+++CR YD
Sbjct: 167 CARCGRNIHSSDWVRRARGSTFHLACFSCTSCKRQLSTGEECGLLENRVFCRPHYD 222
>gi|321464128|gb|EFX75138.1| hypothetical protein DAPPUDRAFT_323670 [Daphnia pulex]
Length = 278
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C I DR++L+V D +H C+ C++CG L CF R YC+ D+ R
Sbjct: 41 CAGCSGFILDRFILKVLDRPWHTECLKCMDCGTHLVDKCFVRGGSTYCKEDFFRR 95
>gi|196049633|pdb|2RGT|A Chain A, Crystal Structure Of Lhx3 Lim Domains 1 And 2 With The
Binding Domain Of Isl1
gi|196049634|pdb|2RGT|B Chain B, Crystal Structure Of Lhx3 Lim Domains 1 And 2 With The
Binding Domain Of Isl1
Length = 169
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
P + C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 4 PEIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKR 63
>gi|403304939|ref|XP_003943036.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 360
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D ++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTATCVGCGSQIHDPFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|340721611|ref|XP_003399211.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus terrestris]
gi|350404711|ref|XP_003487194.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus impatiens]
Length = 334
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
P++ ECG CG + +R +L V ++H C+ C C L HSCF + +LYCR DY
Sbjct: 39 PSVMECGGCGERVRERTVLCVGGRTWHSRCLRCCACARPLHDQHSCFLKGMRLYCRHDY 97
>gi|383857877|ref|XP_003704430.1| PREDICTED: LIM/homeobox protein Awh-like [Megachile rotundata]
Length = 371
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
P+ ECG CG + +R +L V ++H C+ C C L HSCF + +LYCR DY
Sbjct: 77 PSGMECGGCGERVRERTVLCVGGRTWHSRCLRCFACARPLHDQHSCFLKGMRLYCRHDY 135
>gi|158299663|ref|XP_319730.4| AGAP008981-PA [Anopheles gambiae str. PEST]
gi|157013625|gb|EAA14878.5| AGAP008981-PA [Anopheles gambiae str. PEST]
Length = 197
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
+ EC C PI DR+ L + +H +C+ C C +L A+SCF+R+ +YC++DY
Sbjct: 138 GLDECAGCDMPIQDRFYLSAVERKWHASCLQCCICRQTLEGANSCFSRDGNIYCKTDY 195
>gi|403304937|ref|XP_003943035.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 359
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D ++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTATCVGCGSQIHDPFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|156549266|ref|XP_001599629.1| PREDICTED: lipoma-preferred partner homolog [Nasonia vitripennis]
Length = 281
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 5 KECGSCGRPITDRYLLRVADISYHENCVACVECGHSLA---HSCFTRENKLYCRSDY 58
++C CG I DR+LL + +H NC+ C CG +LA SC+++ N + C++DY
Sbjct: 130 QQCAGCGNRIVDRWLLFALERYWHNNCLKCTTCGTALAEIGQSCYSKGNMILCKNDY 186
>gi|258504058|gb|ACV72741.1| MEC-3 [Caenorhabditis remanei]
Length = 291
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
+ +C C I DR++ R+ + SYHENCV C C LA CF + ++YC Y
Sbjct: 10 SQNKCNCCNEQIYDRFIYRMDNRSYHENCVKCTICESPLAEKCFWKNGRIYCSQHY 65
>gi|156398319|ref|XP_001638136.1| predicted protein [Nematostella vectensis]
gi|156225254|gb|EDO46073.1| predicted protein [Nematostella vectensis]
Length = 329
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I D+Y+LRVA D+ +H +C+ C +C L +CF RE K YC+ DY
Sbjct: 17 CVGCGSQIHDQYILRVAPDLEWHASCLKCADCHMYLDEKCTCFVREGKTYCKRDY 71
>gi|26355418|dbj|BAC41153.1| unnamed protein product [Mus musculus]
Length = 349
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S C R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCLVRDGKTYCKRDY 71
>gi|335296201|ref|XP_003357709.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Sus scrofa]
Length = 388
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 62 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 118
>gi|462588|sp|P34765.1|MEC3_CAEVU RecName: Full=Mechanosensory protein 3
gi|11060|emb|CAA45377.1| mec-3 [Caenorhabditis remanei]
Length = 320
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
+ +C C I DR++ R+ + SYHENCV C C LA CF + ++YC Y
Sbjct: 25 SQNKCNCCNEQIYDRFIYRMDNHSYHENCVKCTICESPLAEKCFWKNGRIYCSQHY 80
>gi|117306370|gb|AAI26705.1| LHX9 protein [Bos taurus]
Length = 388
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 62 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 118
>gi|170586964|ref|XP_001898249.1| LIM domain containing protein [Brugia malayi]
gi|158594644|gb|EDP33228.1| LIM domain containing protein [Brugia malayi]
Length = 109
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHS-CFTRENKLYCRSDY 58
C CG I ++Y+++V D +HENC+ C C L+ S C++R +LYC+ DY
Sbjct: 55 CNGCGFEIKEKYMVKVDDNCWHENCLICRTCQIPLSGSTCYSRSGQLYCKEDY 107
>gi|157137277|ref|XP_001663968.1| arrowhead [Aedes aegypti]
gi|108869746|gb|EAT33971.1| AAEL013763-PA, partial [Aedes aegypti]
Length = 211
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
K CG C ITDRY+ V+ ++H +C+ C C SL SC+ ++ ++YC++DY
Sbjct: 7 QTEFKSCGGCAEQITDRYIFEVSGCAWHGSCLRCSICYCSLERQVSCYFKDGEVYCKTDY 66
Query: 59 DSRKKGS 65
+ K S
Sbjct: 67 IKKFKAS 73
>gi|190613352|pdb|2JTN|A Chain A, Nmr Solution Structure Of A Ldb1-Lid:lhx3-Lim Complex
Length = 182
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
P + C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 58 PEIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKR 117
>gi|111307610|gb|AAI20881.1| Isl2 protein [Mus musculus]
gi|157423231|gb|AAI48308.2| Isl2 protein [Mus musculus]
Length = 174
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTAMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|432092293|gb|ELK24915.1| LIM/homeobox protein Lhx9, partial [Myotis davidii]
Length = 420
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 12 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 68
>gi|242009361|ref|XP_002425456.1| LIM/homeobox protein Lhx9, putative [Pediculus humanus corporis]
gi|212509292|gb|EEB12718.1| LIM/homeobox protein Lhx9, putative [Pediculus humanus corporis]
Length = 433
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I D+Y+LRVA D+ +H C+ C EC L +CF R+ K YC+ DY
Sbjct: 11 CVGCGAQIHDQYILRVAPDLEWHAACLKCAECHQFLDENCTCFVRDGKTYCKRDY 65
>gi|157128769|ref|XP_001661512.1| arrowhead [Aedes aegypti]
gi|108872464|gb|EAT36689.1| AAEL011247-PA [Aedes aegypti]
Length = 271
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
++ C +CG PI D+YL V S+H +C+ C C L SC+ R+ ++YCRSDY
Sbjct: 19 LRTCTACGEPIADKYLFDVDGCSWHGSCLRCSVCLTLLERQPSCYFRDRQVYCRSDY 75
>gi|308492800|ref|XP_003108590.1| CRE-MEC-3 protein [Caenorhabditis remanei]
gi|308248330|gb|EFO92282.1| CRE-MEC-3 protein [Caenorhabditis remanei]
Length = 320
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
+ +C C I DR++ R+ + SYHENCV C C LA CF + ++YC Y
Sbjct: 25 SQNKCNCCNEQIYDRFIYRMDNRSYHENCVKCTICESPLAEKCFCKNGRIYCSQHY 80
>gi|170048230|ref|XP_001870664.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870358|gb|EDS33741.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 209
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
+ EC C PI DR+ L + +H C+ C C +L A+SCF+R+ +YC++DY
Sbjct: 150 GLDECAGCDMPIQDRFYLSAVERKWHATCLQCCVCRQTLEGANSCFSRDGNIYCKTDY 207
>gi|327289984|ref|XP_003229704.1| PREDICTED: LIM domain kinase 1-like, partial [Anolis carolinensis]
Length = 1133
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C SC I D L+ + +H +C C ECG SL+H + ++ +LYC+ DY
Sbjct: 519 CASCSHSIYDGQYLQALNADWHADCFRCSECGTSLSHQYYEKDGRLYCKKDY 570
>gi|66792874|ref|NP_001019715.1| LIM/homeobox protein Lhx9 [Bos taurus]
gi|61555226|gb|AAX46681.1| LIM homeobox 9 [Bos taurus]
gi|296478851|tpg|DAA20966.1| TPA: LIM/homeobox protein Lhx9 [Bos taurus]
Length = 378
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 52 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 108
>gi|449478466|ref|XP_002188127.2| PREDICTED: LIM/homeobox protein Lhx6 [Taeniopygia guttata]
Length = 421
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL HSC+ + +++C+ DY SR
Sbjct: 128 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQHSCYIKNKEIFCKMDYFSR 184
>gi|268578911|ref|XP_002644438.1| C. briggsae CBR-LIM-4 protein [Caenorhabditis briggsae]
Length = 346
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C +PI D++ L V S+HE+C+ C EC L++ CF ++++ YC+ Y
Sbjct: 100 CAQCQQPIQDKFYLSVDGRSWHESCLQCTECKCRLSNKCFYKDSEFYCKECY 151
>gi|322787264|gb|EFZ13400.1| hypothetical protein SINV_02203 [Solenopsis invicta]
Length = 333
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
P++ ECG CG + +R +L V ++H C+ C C L HSCF R ++YCR DY
Sbjct: 39 PSVMECGGCGERVRERTVLCVGGRTWHSRCLRCCACARPLHDQHSCFLRGMRVYCRHDY 97
>gi|256079939|ref|XP_002576241.1| lim homeobox protein [Schistosoma mansoni]
gi|350644840|emb|CCD60434.1| lim homeobox protein,putative [Schistosoma mansoni]
Length = 192
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 29/52 (55%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C C +PI D YLL + ++HE CV C C L C R KLYCR+DY
Sbjct: 9 CAGCHQPIWDPYLLCIDHNTWHEQCVTCSICHCLLHDKCLVRNEKLYCRNDY 60
>gi|195425678|ref|XP_002061119.1| apterous [Drosophila willistoni]
gi|27374312|gb|AAO01060.1| ap-PA [Drosophila willistoni]
gi|194157204|gb|EDW72105.1| apterous [Drosophila willistoni]
Length = 469
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
++ +C CGR I DR+ L + +H +C+ C C L SC++R+ +YC++DY
Sbjct: 145 SLDDCAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDY 202
>gi|356577835|ref|XP_003557027.1| PREDICTED: insulin gene enhancer protein isl-1-like, partial
[Glycine max]
Length = 289
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 MKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
+ C CG I D+Y+LRVA D+ +H C+ C EC L SC F R+ K YC+ DY
Sbjct: 4 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 61
>gi|157119552|ref|XP_001659420.1| hypothetical protein AaeL_AAEL008690 [Aedes aegypti]
gi|108875288|gb|EAT39513.1| AAEL008690-PA, partial [Aedes aegypti]
Length = 176
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
+ EC C PI DR+ L + +H C+ C C +L A+SCF+R+ +YC++DY
Sbjct: 117 GLDECAGCDMPIQDRFYLSAVERKWHATCLQCCICRQTLEGANSCFSRDGNIYCKTDY 174
>gi|410908008|ref|XP_003967483.1| PREDICTED: insulin gene enhancer protein ISL-2A-like [Takifugu
rubripes]
Length = 359
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y++RV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 27 CVGCGSQIHDQYIMRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|348568514|ref|XP_003470043.1| PREDICTED: LIM domain kinase 1 isoform 1 [Cavia porcellus]
Length = 646
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C CG+ I D L+ + +H +C C ECG +L+H + ++ +L+C+ DY +R
Sbjct: 25 CARCGQRIYDGQYLQALNADWHADCFRCSECGATLSHQYYEKDGQLFCKKDYWAR 79
>gi|328707561|ref|XP_003243430.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 2
[Acyrthosiphon pisum]
Length = 487
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I D+Y+L+VA D+ +H C+ C EC L +CF R+ K YC+ DY
Sbjct: 76 CVGCGGAINDQYILKVAPDLEWHAACLKCAECHQFLDEHCTCFVRDGKTYCKLDY 130
>gi|195172023|ref|XP_002026801.1| GL26985 [Drosophila persimilis]
gi|194111740|gb|EDW33783.1| GL26985 [Drosophila persimilis]
Length = 269
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 15/83 (18%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVA-CVECGHSLAHSCFTRENKLYCRSDYDSRKKGS 65
C CG+ I DRYLLR D+ +HE+C+ CV + ENK+ C DY+ R
Sbjct: 120 CAGCGKHIQDRYLLRALDMLWHEDCLKFCV------GDRFYLCENKILCEYDYEER---- 169
Query: 66 QLVTVLFYSMYVHSVMKFHTITL 88
++F SM H ++K H +L
Sbjct: 170 ----LVFASMANHPMLKRHVSSL 188
>gi|339247641|ref|XP_003375454.1| LIM/homeobox protein Lhx3 [Trichinella spiralis]
gi|316971202|gb|EFV55014.1| LIM/homeobox protein Lhx3 [Trichinella spiralis]
Length = 305
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 13 PITDRYLLRVADISYHENCVACVECG--HSLAHSCFTRENKLYCRSDY 58
PI DR++L VA +HE C+ C CG SLA SCF R+ K+ CR DY
Sbjct: 2 PINDRFMLNVAGNFWHERCLVCSICGLELSLAPSCFLRDGKVLCRGDY 49
>gi|157118344|ref|XP_001653181.1| lim homeobox protein [Aedes aegypti]
gi|108883304|gb|EAT47529.1| AAEL001373-PA [Aedes aegypti]
Length = 391
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C CG+ I DRY ++++ D +HE C+ C C L SC+ + KLYC+ DY
Sbjct: 18 CEGCGQKIKDRYFMKLSPDQYWHEQCLLCCICHIQLNQSCYMKNTKLYCKDDY 70
>gi|47217859|emb|CAG02352.1| unnamed protein product [Tetraodon nigroviridis]
Length = 235
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|410921222|ref|XP_003974082.1| PREDICTED: LIM/homeobox protein Lhx8-like [Takifugu rubripes]
Length = 324
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C +CG I D+YLL+V D+ +H C++C C SL SC+ +E +++C+ DY R
Sbjct: 55 CANCGEEIVDKYLLKVNDLCWHVRCLSCSVCHTSLGSHTSCYIKEKEVFCKMDYFRR 111
>gi|312385468|gb|EFR29960.1| hypothetical protein AND_00755 [Anopheles darlingi]
Length = 339
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 5 KECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSRK 62
K CG C ITDRY+ V S+H +C+ C C L SCF R+ +YC++DY +
Sbjct: 72 KACGGCSEQITDRYIFEVNGASWHGSCLRCSVCYCPLERQASCFLRDGDVYCKADYIKKF 131
Query: 63 KGS 65
K S
Sbjct: 132 KTS 134
>gi|405961382|gb|EKC27193.1| LIM/homeobox protein Lhx9 [Crassostrea gigas]
Length = 415
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVEC--GHSLAHSCFTRENKLYCRSDY 58
C CG I DRY L D +H NC+ C EC G +CF R+ +YC+ DY
Sbjct: 62 CAGCGSRIFDRYYLMAVDKQWHVNCLKCCECKIGLDSELTCFARDGNIYCKEDY 115
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 4 MKECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYD 59
+K C C + IT + ++R D+ +H NC C C +L +++ +YCR+DY+
Sbjct: 121 VKRCTRCHQGITANELVMRAKDLVFHINCFTCASCNKTLTTGDQFGMQDDLIYCRTDYE 179
>gi|393912072|gb|EFO23845.2| hypothetical protein LOAG_04639 [Loa loa]
Length = 319
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
CG C PI DR++L+V D S+H C+ CV C L+ C+ + + YC+ + R
Sbjct: 11 CGKCEEPIRDRFVLKVLDRSFHPQCLRCVHCEQLLSSKCYLKGGQPYCKDHFYKR 65
>gi|351705380|gb|EHB08299.1| LIM domain kinase 1, partial [Heterocephalus glaber]
Length = 623
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
C CG+ I D L+ + +H +C C ECG SL+H + ++ +L+C+ DY
Sbjct: 7 CARCGQRIYDGQYLQAQNADWHADCFRCCECGASLSHQYYEKDGQLFCKKDY 58
>gi|440904877|gb|ELR55334.1| LIM/homeobox protein Lhx9 [Bos grunniens mutus]
Length = 397
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 71 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 127
>gi|47225812|emb|CAF98292.1| unnamed protein product [Tetraodon nigroviridis]
Length = 360
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y++RV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 27 CVGCGSQIHDQYIMRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|417403614|gb|JAA48606.1| Putative protein kinase [Desmodus rotundus]
Length = 647
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C EC SL+H + ++ +L+C+ DY +R
Sbjct: 25 CASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQYYEKDGQLFCKKDYWAR 79
>gi|328707559|ref|XP_001944557.2| PREDICTED: insulin gene enhancer protein isl-1-like isoform 1
[Acyrthosiphon pisum]
Length = 513
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I D+Y+L+VA D+ +H C+ C EC L +CF R+ K YC+ DY
Sbjct: 102 CVGCGGAINDQYILKVAPDLEWHAACLKCAECHQFLDEHCTCFVRDGKTYCKLDY 156
>gi|431898150|gb|ELK06845.1| LIM domain kinase 1 [Pteropus alecto]
Length = 662
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C EC SL+H + ++ +L+C+ DY +R
Sbjct: 11 CASCGQRIYDGQYLQALNTDWHADCFRCCECSASLSHQYYEKDGQLFCKKDYWAR 65
>gi|321477982|gb|EFX88940.1| hypothetical protein DAPPUDRAFT_4176 [Daphnia pulex]
Length = 199
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C +CG ITDR+L++V+ ++H C+ C C +L + SCF R +YCR+DY
Sbjct: 1 CAACGELITDRFLIQVSGRTWHSTCLRCSVCRTALDNQPSCFVRAGAIYCRADY 54
>gi|301778549|ref|XP_002924694.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3-like
[Ailuropoda melanoleuca]
Length = 365
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCTDCHAPLAERCFSRGESVYCKDDFFKR 88
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 92 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 150
Query: 61 RKKGSQL---VTVLFYSMYVHS 79
K+ Q T+L S++ +
Sbjct: 151 AKQRGQWGSPPTLLSPSVWFQN 172
>gi|410912158|ref|XP_003969557.1| PREDICTED: insulin gene enhancer protein ISL-3-like [Takifugu
rubripes]
Length = 359
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+L+V+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 27 CVGCGSQIHDQYILKVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|332634756|ref|NP_001193833.1| LIM domain kinase 1 [Bos taurus]
gi|296473062|tpg|DAA15177.1| TPA: LIM domain kinase 1 [Bos taurus]
Length = 647
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C EC SL+H + ++ +L+C+ DY +R
Sbjct: 25 CASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQYYEKDGQLFCKKDYWAR 79
>gi|335296199|ref|XP_003130643.2| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Sus scrofa]
Length = 399
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 71 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 127
>gi|312075006|ref|XP_003140224.1| hypothetical protein LOAG_04639 [Loa loa]
Length = 325
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
CG C PI DR++L+V D S+H C+ CV C L+ C+ + + YC+ + R
Sbjct: 17 CGKCEEPIRDRFVLKVLDRSFHPQCLRCVHCEQLLSSKCYLKGGQPYCKDHFYKR 71
>gi|281347117|gb|EFB22701.1| hypothetical protein PANDA_014076 [Ailuropoda melanoleuca]
Length = 369
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCTDCHAPLAERCFSRGESVYCKDDFFKR 88
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 92 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 150
Query: 61 RKKGSQLVT 69
K+ Q +
Sbjct: 151 AKQRGQWGS 159
>gi|326912347|ref|XP_003202514.1| PREDICTED: hypothetical protein LOC100545049, partial [Meleagris
gallopavo]
Length = 391
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 5 KECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRSDY 58
K C C R I DRYLL+ D +HE+C+ C C L + +T+ N + CR DY
Sbjct: 257 KGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDY 313
>gi|195475694|ref|XP_002090119.1| GE19443 [Drosophila yakuba]
gi|194176220|gb|EDW89831.1| GE19443 [Drosophila yakuba]
Length = 469
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
++ +C CGR I DR+ L + +H +C+ C C L SC++R+ +YC++DY
Sbjct: 144 SLDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDY 201
>gi|308489722|ref|XP_003107054.1| CRE-LIM-6 protein [Caenorhabditis remanei]
gi|308252942|gb|EFO96894.1| CRE-LIM-6 protein [Caenorhabditis remanei]
Length = 314
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 5 KECGSCGRPITDRYLLRVADISYHENCVACVECGHSLA--HSCFTRENKLYCRSDY 58
K C +CG I DRY+ RV D SYHE C+ C C SL+ CF+R +YC D+
Sbjct: 40 KLCSACGCLIKDRYIYRVMDESYHETCLRCYCCQSSLSSFKKCFSRHGNIYCEQDH 95
>gi|410904301|ref|XP_003965630.1| PREDICTED: LIM/homeobox protein Lhx6-like [Takifugu rubripes]
Length = 373
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SCG+ I DRYLL+V ++ +H C+ C C SL SC+ + +++C+ DY SR
Sbjct: 95 CASCGQEILDRYLLKVNNLIWHVRCLECSVCRTSLRQHSSCYIKNKEIFCKMDYFSR 151
>gi|301769431|ref|XP_002920134.1| PREDICTED: LIM domain kinase 1-like [Ailuropoda melanoleuca]
Length = 845
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C EC SL+H + ++ +L+C+ DY +R
Sbjct: 229 CASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQYYEKDGQLFCKRDYWAR 283
>gi|393904553|gb|EJD73731.1| hypothetical protein LOAG_18862, partial [Loa loa]
Length = 114
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSRKK 63
M C C I DRY+ V + ++H C+ C +C L+ +CFTR + CR D+ +R+
Sbjct: 1 MAICAGCNNAILDRYVFHVLEKAWHATCIQCADCKALLSETCFTRNGLILCRKDF-ARRY 59
Query: 64 GSQ 66
G++
Sbjct: 60 GTR 62
>gi|76163070|gb|AAX30839.2| SJCHGC08109 protein [Schistosoma japonicum]
Length = 207
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCF-TRENKLYCRSDYD 59
+ C C R ITD+YL R+ +++HE+C C C L CF +N+L CR DYD
Sbjct: 57 LPTCTGCRRNITDQYLYRIRGLAWHESCAICSVCSVELVEVCFIVNKNELLCRRDYD 113
>gi|148676721|gb|EDL08668.1| LIM homeobox protein 6, isoform CRA_b [Mus musculus]
Length = 380
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + ++YC+ DY SR
Sbjct: 102 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYFSR 158
>gi|440908467|gb|ELR58481.1| LIM domain kinase 1, partial [Bos grunniens mutus]
Length = 597
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C EC SL+H + ++ +L+C+ DY +R
Sbjct: 7 CASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQYYEKDGQLFCKKDYWAR 61
>gi|426255308|ref|XP_004021296.1| PREDICTED: LIM domain kinase 1 [Ovis aries]
Length = 608
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C EC SL+H + ++ +L+C+ DY +R
Sbjct: 10 CASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQYYEKDGQLFCKKDYWAR 64
>gi|391339813|ref|XP_003744241.1| PREDICTED: sodium-coupled monocarboxylate transporter 1-like
[Metaseiulus occidentalis]
Length = 707
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
CG CG+ I +R L+V + S+H +C+ C C L +CF R+N +YC+ DY
Sbjct: 455 CGGCGQLILERVQLQVDNCSWHVDCLRCCVCDCLLEKDSTCFFRDNNVYCKQDY 508
>gi|432872837|ref|XP_004072149.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oryzias latipes]
Length = 346
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
+C +CG I DRYLL+V ++++H C+ C C SL SC+ + ++YC+ DY SR
Sbjct: 67 QCANCGIEIHDRYLLKVNNLNWHLGCLECSVCRASLHQHSSCYVKNKEIYCKLDYFSR 124
>gi|27374323|gb|AAO01069.1| ap-PA [Drosophila virilis]
Length = 204
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
N +C CGR I DR+ L + +H +C+ C C L SC++R+ +YC++DY
Sbjct: 146 NPDDCAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDY 203
>gi|195084069|ref|XP_001997398.1| GH23605 [Drosophila grimshawi]
gi|193905450|gb|EDW04317.1| GH23605 [Drosophila grimshawi]
Length = 203
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 MKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
+ C CG I D+Y+LRVA D+ +H C+ C EC L SC F R+ K YC+ DY
Sbjct: 35 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 92
>gi|258504145|gb|ACV72772.1| LIM-6 [Caenorhabditis remanei]
Length = 263
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 5 KECGSCGRPITDRYLLRVADISYHENCVACVECGHSLA--HSCFTRENKLYCRSDY 58
K C +CG I DRY+ RV D SYHE C+ C C SL+ CF+R +YC D+
Sbjct: 7 KLCSACGCLIKDRYIYRVMDESYHETCLRCYCCQSSLSSFKKCFSRHGNIYCEQDH 62
>gi|258504135|gb|ACV72767.1| LIM-6 [Caenorhabditis remanei]
gi|258504137|gb|ACV72768.1| LIM-6 [Caenorhabditis remanei]
gi|258504139|gb|ACV72769.1| LIM-6 [Caenorhabditis remanei]
gi|258504141|gb|ACV72770.1| LIM-6 [Caenorhabditis remanei]
gi|258504143|gb|ACV72771.1| LIM-6 [Caenorhabditis remanei]
gi|258504147|gb|ACV72773.1| LIM-6 [Caenorhabditis remanei]
Length = 263
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 5 KECGSCGRPITDRYLLRVADISYHENCVACVECGHSLA--HSCFTRENKLYCRSDY 58
K C +CG I DRY+ RV D SYHE C+ C C SL+ CF+R +YC D+
Sbjct: 7 KLCSACGCLIKDRYIYRVMDESYHETCLRCYCCQSSLSSFKKCFSRHGNIYCEQDH 62
>gi|258504133|gb|ACV72766.1| LIM-6 [Caenorhabditis remanei]
Length = 263
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 5 KECGSCGRPITDRYLLRVADISYHENCVACVECGHSLA--HSCFTRENKLYCRSDY 58
K C +CG I DRY+ RV D SYHE C+ C C SL+ CF+R +YC D+
Sbjct: 7 KLCSACGCLIKDRYIYRVMDESYHETCLRCYCCQSSLSSFKKCFSRHGNIYCEQDH 62
>gi|348505012|ref|XP_003440055.1| PREDICTED: LIM/homeobox protein Lhx8-like [Oreochromis niloticus]
Length = 338
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SC I D+YLL+V D+ +H C++C C SL SC+ +E +++C+ DY R
Sbjct: 55 CASCNEEIVDKYLLKVNDLCWHVRCLSCSVCQTSLGSHTSCYIKEKEVFCKLDYFRR 111
>gi|281339985|gb|EFB15569.1| hypothetical protein PANDA_008829 [Ailuropoda melanoleuca]
Length = 630
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C EC SL+H + ++ +L+C+ DY +R
Sbjct: 7 CASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQYYEKDGQLFCKRDYWAR 61
>gi|44194074|gb|AAS46773.1| insulin enhancer binding protein [Rattus norvegicus]
Length = 326
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L S CF R+ K Y + DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYSKRDY 71
>gi|47214973|emb|CAG01307.1| unnamed protein product [Tetraodon nigroviridis]
Length = 396
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CGR I DRY L D +H C+ C EC L +CF+++ +YC+ DY R
Sbjct: 53 CAGCGRKIVDRYYLLAVDKQWHMRCLRCCECKLHLESELTCFSKDGSIYCKEDYYRR 109
>gi|291240697|ref|XP_002740254.1| PREDICTED: LIM class homeodomain transcription factor, Lhx6/8
subclass-like [Saccoglossus kowalevskii]
Length = 283
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLA--HSCFTRENKLYCRSDY 58
C C PI DRYLL+V S+H C+ C C L SCFT+++ +YC+ DY
Sbjct: 22 CLGCTSPIQDRYLLKVGTRSWHVRCLRCCICQTGLGGQQSCFTKDDNIYCKMDY 75
>gi|5738954|dbj|BAA83420.1| LIM-homeodomain (LHX) protein 6.1b [Mus musculus]
Length = 348
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + ++YC+ DY SR
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYFSR 126
>gi|410984654|ref|XP_003998641.1| PREDICTED: LIM domain kinase 1 [Felis catus]
Length = 656
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C EC SL+H + ++ +L+C+ DY +R
Sbjct: 34 CASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQYYEKDGQLFCKRDYWAR 88
>gi|47223723|emb|CAF99332.1| unnamed protein product [Tetraodon nigroviridis]
Length = 381
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SCG+ I DRYLL+V ++ +H C+ C C SL SC+ + +++C+ DY SR
Sbjct: 46 CASCGQEILDRYLLKVNNLIWHVRCLECSVCRTSLRQHSSCYIKNKEIFCKMDYFSR 102
>gi|332018691|gb|EGI59263.1| Protein apterous [Acromyrmex echinatior]
Length = 558
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 1 MPNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
+P C CG I+DR+ L+ D +H C+ C C L +CF+R+ +YC+ DY
Sbjct: 178 VPGNVVCAGCGLKISDRFYLQAVDKRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDY 237
>gi|1079258|pir||S52089 transcription factor isl-2a (clone S3) - chinook salmon
Length = 91
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDYDS 60
C CG I D+Y+LRVA D+ +H C+ C EC L +C F R+ K YC+ DY S
Sbjct: 3 CVGCGSQIHDQYILRVAPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVS 59
>gi|326205389|dbj|BAJ84073.1| insulin gene enhancer protein ISL-2 [Homo sapiens]
Length = 189
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
P C CG I D+++LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 22 PGTAMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|328925124|dbj|BAK19077.1| apterous B alpha [Bombyx mori]
Length = 349
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
EC CG I DRY L D +H +C+ C EC L +CF+R+ +YC+ DY
Sbjct: 17 ECAGCGGKIQDRYYLLAVDRQWHGSCLRCCECRLPLDTELTCFSRDGNIYCKEDY 71
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 4 MKECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSLAHS-CFTRENKL-YCRSDYDS 60
+K CG C IT + ++R D+ YH NC CV CG L+ F + L YCR YD+
Sbjct: 77 VKRCGRCCNGITANELVMRARDLVYHLNCFTCVACGTQLSKGDVFGMKGGLVYCRPHYDT 136
>gi|133892051|ref|NP_001076596.1| LIM/homeobox protein Lhx6 isoform 4 [Mus musculus]
gi|148676720|gb|EDL08667.1| LIM homeobox protein 6, isoform CRA_a [Mus musculus]
Length = 348
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + ++YC+ DY SR
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYFSR 126
>gi|82524343|ref|NP_001032320.1| LIM/homeobox protein Lhx9 isoform 2 [Danio rerio]
gi|76667071|dbj|BAE45355.1| LIM homeodomain type transcription factor Lhx9 [Danio rerio]
Length = 395
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 1 MPNMKE-----CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLY 53
MP+M C CG I+DRY L D +H C+ C EC +L +CF ++ +Y
Sbjct: 60 MPSMSPEKPALCAGCGGKISDRYYLHAVDKQWHLRCLKCCECKLALESELTCFAKDGSIY 119
Query: 54 CRSDYDSR 61
C+ DY R
Sbjct: 120 CKEDYYRR 127
>gi|444521209|gb|ELV13150.1| LIM/homeobox protein Lhx3 [Tupaia chinensis]
Length = 290
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 32 CAGCDQHILDRFILKALDRHWHSQCLKCCDCHAPLAERCFSRGESVYCKDDFFKR 86
>gi|291411462|ref|XP_002722016.1| PREDICTED: LIM domain kinase 1 [Oryctolagus cuniculus]
Length = 663
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ +H +C C EC SL+H + ++ +L+C+ DY +R
Sbjct: 40 CASCGQSICDDQYLQALSADWHSDCFRCCECSASLSHQYYEKDGQLFCKKDYWAR 94
>gi|354500655|ref|XP_003512414.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Cricetulus griseus]
Length = 366
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + ++YC+ DY SR
Sbjct: 88 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYFSR 144
>gi|148676722|gb|EDL08669.1| LIM homeobox protein 6, isoform CRA_c [Mus musculus]
Length = 395
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + ++YC+ DY SR
Sbjct: 102 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYFSR 158
>gi|347964385|ref|XP_311266.4| AGAP000731-PA [Anopheles gambiae str. PEST]
gi|333467506|gb|EAA06846.4| AGAP000731-PA [Anopheles gambiae str. PEST]
Length = 420
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRSDY 58
P + C CG+ I DR+LLR D+ +HE+C+ C C L + +T+ N + C+ DY
Sbjct: 144 PQQQLCAGCGKHIQDRFLLRALDLLWHEDCLKCGCCDCRLGEVGSTLYTKGNLMLCKRDY 203
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
Query: 3 NMKECGSCGRPITD-RYLLRVADISYHENCVACVECGHS--LAHSCFTRENKLYCRSDYD 59
N C +C + I ++R + YH C AC +C H + + ENK+ C DY+
Sbjct: 209 NTGFCAACNKVIPAFEMVMRARNNVYHLECFACQQCNHRFCVGDKFYLCENKILCEYDYE 268
Query: 60 SRKKGSQLVTVLFYSMYVHSVMK 82
R ++F SM H ++K
Sbjct: 269 ER--------LVFASMANHPMLK 283
>gi|443696308|gb|ELT97041.1| hypothetical protein CAPTEDRAFT_43751, partial [Capitella teleta]
Length = 271
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG ITDRY L+ + ++H NC+ C +C L +C+ R+ ++C+ DY
Sbjct: 2 CAGCGEKITDRYYLQAVERAWHANCLRCAQCKLPLDSEVTCYARDGSIFCKEDY 55
>gi|307213403|gb|EFN88839.1| LIM domain transcription factor LMO4-B [Harpegnathos saltator]
Length = 249
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 3 NMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLA---HSCFTRENKLYCRSDY 58
+++C CG I +R+LL D +H C+ C CG +LA SC+TR + C+SDY
Sbjct: 138 GIQQCAGCGLQIVERWLLLAMDRYWHNACLKCSYCGTALAEIGQSCYTRSGMVLCKSDY 196
>gi|149038911|gb|EDL93131.1| LIM homeobox protein 6 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 373
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + ++YC+ DY SR
Sbjct: 95 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYFSR 151
>gi|5738956|dbj|BAA83421.1| LIM-homeodomain (LHX) protein 6.1a [Mus musculus]
Length = 363
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + ++YC+ DY SR
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYFSR 126
>gi|74202526|dbj|BAE24841.1| unnamed protein product [Mus musculus]
Length = 647
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C EC SL+H + ++ +L+C+ DY +R
Sbjct: 25 CASCGQRIYDGQYLQALNADWHADCFRCCECSVSLSHQYYEKDGQLFCKKDYWAR 79
>gi|344241263|gb|EGV97366.1| LIM/homeobox protein Lhx6 [Cricetulus griseus]
Length = 363
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + ++YC+ DY SR
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYFSR 126
>gi|225709660|gb|ACO10676.1| LIM/homeobox protein Awh [Caligus rogercresseyi]
Length = 274
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLA--HSCFTRENKLYCRSDYD 59
P + C CG ITD+Y+L+VA S+H +C+ C C L SCF +++ L+C+ DY
Sbjct: 20 PWGETCSDCGAGITDQYILQVAGQSWHSSCLRCSVCQEILDSHSSCFIKDDLLFCKLDY- 78
Query: 60 SRKKGSQ 66
+R GS+
Sbjct: 79 ARAFGSK 85
>gi|595790|gb|AAC52147.1| Kiz-1 [Mus musculus]
Length = 633
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C EC SL+H + ++ +L+C+ DY +R
Sbjct: 11 CASCGQRIYDGQYLQALNADWHADCFRCCECSVSLSHQYYEKDGQLFCKKDYWAR 65
>gi|133892446|ref|NP_001076595.1| LIM/homeobox protein Lhx6 isoform 3 [Mus musculus]
gi|341940899|sp|Q9R1R0.2|LHX6_MOUSE RecName: Full=LIM/homeobox protein Lhx6; Short=LIM homeobox protein
6; AltName: Full=LIM/homeobox protein Lhx6.1
gi|40787713|gb|AAH65077.1| Lhx6 protein [Mus musculus]
Length = 363
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + ++YC+ DY SR
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYFSR 126
>gi|6754548|ref|NP_034847.1| LIM domain kinase 1 [Mus musculus]
gi|1708821|sp|P53668.1|LIMK1_MOUSE RecName: Full=LIM domain kinase 1; Short=LIMK-1; AltName:
Full=KIZ-1
gi|4972949|gb|AAD34858.1|AF139987_1 LIM-kinase1 [Mus musculus]
gi|9800518|gb|AAF99334.1|AF289665_1 LIMK1 [Mus musculus]
gi|1051160|emb|CAA60377.1| mLimk1 [Mus musculus]
gi|148687470|gb|EDL19417.1| LIM-domain containing, protein kinase [Mus musculus]
gi|162317928|gb|AAI56779.1| LIM-domain containing, protein kinase [synthetic construct]
Length = 647
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C EC SL+H + ++ +L+C+ DY +R
Sbjct: 25 CASCGQRIYDGQYLQALNADWHADCFRCCECSVSLSHQYYEKDGQLFCKKDYWAR 79
>gi|395501088|ref|XP_003754930.1| PREDICTED: insulin gene enhancer protein ISL-2 [Sarcophilus
harrisii]
Length = 335
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+L+V+ D+ +H C+ C EC L +C F R K YC+ DY
Sbjct: 2 CVGCGTQIHDQYILKVSPDLEWHAACLKCAECSQYLDETCTCFVRNGKTYCKRDY 56
>gi|444707251|gb|ELW48535.1| LIM/homeobox protein Lhx2 [Tupaia chinensis]
Length = 442
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 109
>gi|62859667|ref|NP_001016720.1| ISL LIM homeobox 1 [Xenopus (Silurana) tropicalis]
Length = 135
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRV+ D+ +H C+ C EC L +C F R+ K YC+ DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 71
>gi|312103264|ref|XP_003150115.1| homeobox protein Lim-1 [Loa loa]
Length = 90
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDY 58
M C C I DRY+ V + ++H C+ C +C L+ +CFTR + CR D+
Sbjct: 34 MAICAGCNNAILDRYVFHVLEKAWHATCIQCADCKALLSETCFTRNGLILCRKDF 88
>gi|156552953|ref|XP_001603153.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Nasonia
vitripennis]
Length = 458
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+++LRVA D+ +H C+ C C L SC F R+ K YC+ DY
Sbjct: 47 CVGCGGRIHDQWILRVAPDLEWHAACLKCAACQQFLDESCTCFVRDGKTYCKDDY 101
>gi|307166315|gb|EFN60497.1| Protein apterous [Camponotus floridanus]
Length = 506
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DR+ L+ D +H C+ C C L +CF+R+ +YC+ DY
Sbjct: 183 CAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEITCFSRDGNIYCKKDY 236
>gi|357622661|gb|EHJ74087.1| apterous [Danaus plexippus]
Length = 359
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
EC CG I DRY L D +H C+ C EC L +CF+R+ +YC+ DY
Sbjct: 17 ECAGCGGRIQDRYYLLAVDRQWHGACLRCCECRLPLDSELTCFSRDGNIYCKDDY 71
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 4 MKECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSLAHS-CFTRENKL-YCRSDYDS 60
+K C CG IT + ++R D+ +H C CV CG L+ F N L YCR YDS
Sbjct: 77 VKRCARCGNGITANELVMRARDMVFHLTCFTCVACGTLLSKGDVFGMRNSLVYCRPHYDS 136
>gi|312089567|ref|XP_003146295.1| LIM domain-containing protein [Loa loa]
gi|307758543|gb|EFO17777.1| LIM domain-containing protein [Loa loa]
Length = 141
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHS-CFTRENKLYCRSDY 58
C CG I ++Y+++V D +HENC+ C C L+ S C++R + YC+ DY
Sbjct: 87 CNGCGYEIKEKYMVQVDDNCWHENCLICCSCRIPLSGSTCYSRSGQFYCKEDY 139
>gi|307182932|gb|EFN69942.1| LIM/homeobox protein Awh [Camponotus floridanus]
Length = 458
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
+CG CG +R +L V ++H C+ C C L HSCF R +LYCR DY
Sbjct: 183 DCGGCGERGRERTVLCVGGRTWHSRCLKCYACARPLHDQHSCFLRGMRLYCRHDY 237
>gi|426363578|ref|XP_004048915.1| PREDICTED: LIM/homeobox protein Lhx3 [Gorilla gorilla gorilla]
Length = 304
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFKR 90
>gi|148676723|gb|EDL08670.1| LIM homeobox protein 6, isoform CRA_d [Mus musculus]
Length = 388
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + ++YC+ DY SR
Sbjct: 95 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYFSR 151
>gi|115727487|ref|XP_782032.2| PREDICTED: LIM/homeobox protein Lhx9 [Strongylocentrotus
purpuratus]
Length = 474
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I DR+ L AD +H C+ C EC L SCF +E +YC+ DY R
Sbjct: 54 CAGCGGRICDRFYLLAADRQWHTQCLQCCECNVQLDSELSCFAKEGNIYCKEDYLKR 110
>gi|551545|gb|AAC52254.1| limk [Mus musculus]
Length = 646
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C EC SL+H + ++ +L+C+ DY +R
Sbjct: 25 CASCGQRIYDGQYLQALNADWHADCFRCCECSVSLSHQYYEKDGQLFCKKDYWAR 79
>gi|547852|sp|P36198.1|LHX2_RAT RecName: Full=LIM/homeobox protein Lhx2; Short=Homeobox protein
LH-2; Short=LIM homeobox protein 2
Length = 426
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 108
>gi|319740961|gb|ADV69000.1| lim-homeobox 2/9 [Patiria miniata]
Length = 304
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG PI DRY L AD +H C+ C EC +L + +CF ++ +YC+ Y R
Sbjct: 48 CAGCGGPIQDRYYLLAADQQWHTECLRCCECKVTLDNELTCFAKDGGIYCKEHYFRR 104
>gi|45382441|ref|NP_990220.1| LIM/homeobox protein Lhx2 [Gallus gallus]
gi|2340819|dbj|BAA21846.1| LIM homeodomain [Gallus gallus]
Length = 400
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 54 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 107
>gi|449478340|ref|XP_004175607.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Taeniopygia
guttata]
Length = 399
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|395505659|ref|XP_003757157.1| PREDICTED: LIM/homeobox protein Lhx2 [Sarcophilus harrisii]
Length = 408
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|190338019|gb|AAI62549.1| LIM homeobox 2 [Danio rerio]
Length = 396
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|431898999|gb|ELK07369.1| LIM/homeobox protein Lhx3 [Pteropus alecto]
Length = 357
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKEDFFKR 88
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA +++L C++DY++
Sbjct: 92 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 150
Query: 61 RKKGSQL--VTVLF 72
K+ Q TV F
Sbjct: 151 AKQRGQREGATVWF 164
>gi|157821727|ref|NP_001101307.1| LIM/homeobox protein Lhx6 [Rattus norvegicus]
gi|149038910|gb|EDL93130.1| LIM homeobox protein 6 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 388
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + ++YC+ DY SR
Sbjct: 95 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYFSR 151
>gi|224073927|ref|XP_002191376.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Taeniopygia
guttata]
Length = 436
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 90 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 143
>gi|357624988|gb|EHJ75556.1| hypothetical protein KGM_03124 [Danaus plexippus]
Length = 225
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 2 PNMKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLA---HSCFTRENKLYCRSDY 58
P +KEC CG I +R+LL D +H C+ C CG +LA S + + + C+SDY
Sbjct: 68 PALKECAGCGGKIVERFLLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKSDY 127
Query: 59 DS 60
S
Sbjct: 128 TS 129
>gi|449472133|ref|XP_002192003.2| PREDICTED: insulin gene enhancer protein ISL-2 [Taeniopygia
guttata]
Length = 271
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 2 PNMKECGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAH--SCFTRENKLYCR 55
P + C CG I D +LLRV+ D+ +H C+ C ECG L +CF R+ K YC+
Sbjct: 68 PGLALCAGCGGRIQDPFLLRVSPDLEWHVACLKCAECGQPLNETCTCFLRDGKAYCK 124
>gi|344271943|ref|XP_003407796.1| PREDICTED: LIM/homeobox protein Lhx2 [Loxodonta africana]
Length = 365
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 12 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 68
>gi|324509239|gb|ADY43889.1| Insulin enhancer protein isl-2b [Ascaris suum]
Length = 427
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRV-ADISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C C + ITDRY+LRV ++ +H C+ C +C + SC F R K YC+ DY
Sbjct: 38 CSGCLQEITDRYILRVHPNLEFHATCLKCTDCERYMDESCTAFVRNGKTYCKDDY 92
>gi|296190791|ref|XP_002743350.1| PREDICTED: LIM/homeobox protein Lhx2 [Callithrix jacchus]
Length = 365
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 12 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 68
>gi|114626624|ref|XP_528427.2| PREDICTED: LIM/homeobox protein Lhx2 [Pan troglodytes]
Length = 365
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 12 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 68
>gi|395824161|ref|XP_003785339.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Otolemur garnettii]
Length = 406
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 109
>gi|75993708|gb|ABA33890.1| lim homeobox transcription factor 2 [Danio rerio]
Length = 396
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|133778048|gb|AAI27382.2| LIM homeobox 2 [Danio rerio]
gi|182888988|gb|AAI64490.1| Lhx2 protein [Danio rerio]
Length = 396
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|297289825|ref|XP_002803600.1| PREDICTED: LIM domain kinase 1-like [Macaca mulatta]
Length = 677
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C +C SL+H + ++ +L+C+ DY +R
Sbjct: 70 CASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYWAR 124
>gi|34733871|gb|AAQ81868.1| LIM homeobox gene protein 2 [Ambystoma mexicanum]
Length = 398
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|324508533|gb|ADY43602.1| Insulin gene enhancer protein isl-2b [Ascaris suum]
Length = 452
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRV-ADISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C C + ITDRY+LRV ++ +H C+ C +C + SC F R K YC+ DY
Sbjct: 38 CSGCLQEITDRYILRVHPNLEFHATCLKCTDCERYMDESCTAFVRNGKTYCKDDY 92
>gi|426223060|ref|XP_004005697.1| PREDICTED: LIM/homeobox protein Lhx2 [Ovis aries]
Length = 404
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 109
>gi|281427312|ref|NP_001163990.1| LIM/homeobox protein Lhx2 [Sus scrofa]
gi|300794175|ref|NP_001178104.1| LIM/homeobox protein Lhx2 [Bos taurus]
gi|239937382|dbj|BAH79127.1| LIM homeobox protein 2 [Sus scrofa]
gi|296482193|tpg|DAA24308.1| TPA: LIM homeobox protein 2-like [Bos taurus]
Length = 406
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 109
>gi|387763115|ref|NP_001248721.1| LIM/homeobox protein Lhx2 [Macaca mulatta]
gi|402896424|ref|XP_003911300.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Papio anubis]
gi|380818036|gb|AFE80892.1| LIM/homeobox protein Lhx2 [Macaca mulatta]
Length = 406
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 109
>gi|432095435|gb|ELK26634.1| LIM/homeobox protein Lhx2 [Myotis davidii]
Length = 389
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 36 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 92
>gi|345487077|ref|XP_001599660.2| PREDICTED: hypothetical protein LOC100114734 [Nasonia vitripennis]
Length = 644
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DR+ L+ D +H +C+ C C L +CF+RE +YC+ DY
Sbjct: 239 CAGCGLRISDRFYLQAVDRRWHASCLQCSHCRQGLDGEVTCFSREGNIYCKKDY 292
>gi|291408369|ref|XP_002720520.1| PREDICTED: LIM homeobox protein 2-like [Oryctolagus cuniculus]
Length = 406
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 109
>gi|30795196|ref|NP_004780.3| LIM/homeobox protein Lhx2 [Homo sapiens]
gi|297685314|ref|XP_002820237.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Pongo abelii]
gi|397473226|ref|XP_003808118.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Pan paniscus]
gi|426362988|ref|XP_004048630.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Gorilla gorilla
gorilla]
gi|8247936|sp|P50458.2|LHX2_HUMAN RecName: Full=LIM/homeobox protein Lhx2; Short=Homeobox protein
LH-2; Short=LIM homeobox protein 2
gi|62739692|gb|AAH93662.1| LIM homeobox 2 [Homo sapiens]
gi|85567249|gb|AAI12186.1| LIM homeobox protein 2 [Homo sapiens]
gi|119607982|gb|EAW87576.1| LIM homeobox 2, isoform CRA_a [Homo sapiens]
gi|167773563|gb|ABZ92216.1| LIM homeobox 2 [synthetic construct]
gi|261859194|dbj|BAI46119.1| LIM homeobox 2 [synthetic construct]
Length = 406
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 109
>gi|348570110|ref|XP_003470840.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 3 [Cavia porcellus]
Length = 404
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 108
>gi|348570108|ref|XP_003470839.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Cavia porcellus]
Length = 406
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 109
>gi|348570106|ref|XP_003470838.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Cavia porcellus]
Length = 404
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 108
>gi|332229975|ref|XP_003264161.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Nomascus
leucogenys]
Length = 406
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 109
>gi|291290877|ref|NP_001167469.1| LIM homeobox 2 [Xenopus laevis]
gi|37720481|gb|AAN41461.1| LIM homeobox protein 2 [Xenopus laevis]
Length = 419
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 74 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 127
>gi|301769255|ref|XP_002920044.1| PREDICTED: LIM/homeobox protein Lhx2-like isoform 1 [Ailuropoda
melanoleuca]
gi|345806102|ref|XP_863668.2| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Canis lupus
familiaris]
gi|281350174|gb|EFB25758.1| hypothetical protein PANDA_008723 [Ailuropoda melanoleuca]
Length = 406
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 109
>gi|403299862|ref|XP_003940693.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 406
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 109
>gi|395824163|ref|XP_003785340.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Otolemur garnettii]
Length = 414
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|301618805|ref|XP_002938795.1| PREDICTED: LIM/homeobox protein Lhx2-like [Xenopus (Silurana)
tropicalis]
Length = 419
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 74 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 130
>gi|187171273|ref|NP_001035099.3| LIM/homeobox protein Lhx2 [Danio rerio]
Length = 427
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 84 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 137
>gi|123907024|sp|Q1LWV4.1|LHX9_DANRE RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|94732381|emb|CAK04966.1| novel protein similar to vertebrate LIM homeobox 9 (LHX9) [Danio
rerio]
gi|190339118|gb|AAI63023.1| Lhx9 protein [Danio rerio]
gi|190339147|gb|AAI63060.1| Lhx9 protein [Danio rerio]
gi|190339149|gb|AAI63073.1| Lhx9 protein [Danio rerio]
Length = 396
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 1 MPNMKE-----CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLY 53
MP+M C CG I+DRY L D +H C+ C EC +L +CF ++ +Y
Sbjct: 60 MPSMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIY 119
Query: 54 CRSDYDSR 61
C+ DY R
Sbjct: 120 CKEDYYRR 127
>gi|4406518|gb|AAD20013.1| LIM-homeodomain protein HLHX2 [Homo sapiens]
Length = 389
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 36 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 92
>gi|345806104|ref|XP_548461.3| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Canis lupus
familiaris]
Length = 397
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 36 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 89
>gi|344243883|gb|EGV99986.1| LIM/homeobox protein Lhx2 [Cricetulus griseus]
Length = 385
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 36 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 92
>gi|6980082|gb|AAF34717.1|AF226616_1 LIM-homeodomain transcription factor islet [Branchiostoma
floridae]
Length = 419
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I D+Y+LRVA D+ +H C+ C +C L +CF RE K YC+ Y
Sbjct: 15 CVGCGSHIHDQYILRVAPDLEWHAACLKCSDCNQYLDETCTCFVREGKTYCKRCY 69
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+C C T + +++R + YH +C CV C L RE+ L+C++D++ +
Sbjct: 76 KCAKCSLGFTKNDFVMRAKNKIYHIDCFRCVACSRQLIPGDEFALREDGLFCKADHEVLE 135
Query: 63 KGSQLV 68
+ S V
Sbjct: 136 RASNNV 141
>gi|47215186|emb|CAG01452.1| unnamed protein product [Tetraodon nigroviridis]
Length = 272
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SC I D+YLL+V D+ +H C++C C SL+ SC+ +E +++C+ DY R
Sbjct: 12 CASCSEEIVDKYLLKVNDLCWHVRCLSCSVCHTSLSSHTSCYIKEKEVFCKLDYFRR 68
>gi|355761343|gb|EHH61791.1| hypothetical protein EGM_19877 [Macaca fascicularis]
Length = 677
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C +C SL+H + ++ +L+C+ DY +R
Sbjct: 55 CASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYWAR 109
>gi|355560570|gb|EHH17256.1| hypothetical protein EGK_13609 [Macaca mulatta]
Length = 634
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C +C SL+H + ++ +L+C+ DY +R
Sbjct: 55 CASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYWAR 109
>gi|322710017|gb|EFZ01592.1| LIM domain-containing protein [Metarhizium anisopliae ARSEF 23]
Length = 528
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSD 57
CG CGR I +YL A + YH C C++CG SL+ F + + YC D
Sbjct: 395 CGDCGRGIEGQYLEDEARVKYHVGCFRCLDCGVSLSQGYFEVDGRSYCERD 445
>gi|6754538|ref|NP_034840.1| LIM/homeobox protein Lhx2 [Mus musculus]
gi|157817308|ref|NP_001100041.1| LIM/homeobox protein Lhx2 [Rattus norvegicus]
gi|8134552|sp|Q9Z0S2.1|LHX2_MOUSE RecName: Full=LIM/homeobox protein Lhx2; Short=Homeobox protein
LH-2; Short=LIM homeobox protein 2
gi|4406516|gb|AAD20012.1| LIM-homeodomain protein MLHX2 [Mus musculus]
gi|26343551|dbj|BAC35432.1| unnamed protein product [Mus musculus]
gi|33416474|gb|AAH55741.1| LIM homeobox protein 2 [Mus musculus]
gi|149047902|gb|EDM00518.1| LIM homeobox protein 2 (predicted) [Rattus norvegicus]
Length = 406
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|328708276|ref|XP_001946004.2| PREDICTED: protein apterous-like [Acyrthosiphon pisum]
Length = 556
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHS--CFTRENKLYCRSDY 58
C CG I DRY L D +H +C+ C +C +LA CF R+ +YC++DY
Sbjct: 185 CDGCGLKILDRYYLFAVDKRWHASCLQCSQCTRTLASEIKCFYRDGNIYCKADY 238
>gi|301763072|ref|XP_002916962.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx8-like
[Ailuropoda melanoleuca]
Length = 574
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SCG I D+YLL+V D+ +H C++C C SL SC+ ++ ++C+ DY R
Sbjct: 303 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRR 359
>gi|167859072|gb|ACA04471.1| Lhx2 [Strongylocentrotus purpuratus]
Length = 251
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I DR+ L AD +H C+ C EC L SCF +E +YC+ DY R
Sbjct: 51 CAGCGGRICDRFYLLAADRQWHTQCLQCCECNVQLDSELSCFAKEGNIYCKEDYLKR 107
>gi|431898812|gb|ELK07182.1| LIM/homeobox protein Lhx2 [Pteropus alecto]
Length = 414
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|355567447|gb|EHH23788.1| LIM/homeobox protein Lhx2 [Macaca mulatta]
Length = 406
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|354498706|ref|XP_003511455.1| PREDICTED: LIM/homeobox protein Lhx2-like [Cricetulus griseus]
Length = 475
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 126 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 182
>gi|402896426|ref|XP_003911301.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Papio anubis]
Length = 414
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|297685312|ref|XP_002820236.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Pongo abelii]
Length = 414
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|397473228|ref|XP_003808119.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Pan paniscus]
gi|426362990|ref|XP_004048631.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Gorilla gorilla
gorilla]
gi|21753589|dbj|BAC04371.1| unnamed protein product [Homo sapiens]
gi|119607983|gb|EAW87577.1| LIM homeobox 2, isoform CRA_b [Homo sapiens]
Length = 397
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 36 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 89
>gi|348536381|ref|XP_003455675.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Oreochromis
niloticus]
Length = 399
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 1 MPNMKE-----CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLY 53
MP+M C CG I+DRY L D +H C+ C EC +L +CF ++ +Y
Sbjct: 62 MPSMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIY 121
Query: 54 CRSDYDSR 61
C+ DY R
Sbjct: 122 CKEDYYRR 129
>gi|62859451|ref|NP_001015899.1| LIM homeobox 8 [Xenopus (Silurana) tropicalis]
gi|89268071|emb|CAJ83129.1| LIM homeobox 7/8 [Xenopus (Silurana) tropicalis]
gi|110645724|gb|AAI18740.1| LIM homeobox 8 [Xenopus (Silurana) tropicalis]
Length = 374
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C +CG I D+YLL+V D+ +H C++C C SL SC+ ++ +YC+ DY R
Sbjct: 93 CSNCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIYCKLDYFRR 149
>gi|410979495|ref|XP_003996119.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3 [Felis
catus]
Length = 309
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLRCSDCHAPLAERCFSRGESVYCKDDFFKR 88
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 6 ECGSC--GRPITDRYLLRVADISYHENCVACVECGHSLAHS---CFTRENKLYCRSDYDS 60
+C +C G P T + + R D YH +C ACV C LA F +++L C++DY++
Sbjct: 92 KCAACQLGIPPT-QVVRRAQDFVYHLHCFACVVCKRQLATGDEFSFMEDSRLVCKADYET 150
Query: 61 RKKGSQL 67
K+ Q
Sbjct: 151 AKQRGQW 157
>gi|403299864|ref|XP_003940694.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 397
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 36 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 89
>gi|380027050|ref|XP_003697249.1| PREDICTED: protein apterous-like [Apis florea]
Length = 555
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DR+ L+ D +H C+ C C L +CF+R+ +YC+ DY
Sbjct: 186 CAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDY 239
>gi|332229977|ref|XP_003264162.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Nomascus
leucogenys]
Length = 414
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|328787176|ref|XP_392622.4| PREDICTED: protein apterous [Apis mellifera]
Length = 560
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DR+ L+ D +H C+ C C L +CF+R+ +YC+ DY
Sbjct: 188 CAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDY 241
>gi|301769257|ref|XP_002920045.1| PREDICTED: LIM/homeobox protein Lhx2-like isoform 2 [Ailuropoda
melanoleuca]
Length = 404
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 108
>gi|261490776|ref|NP_001159787.1| LIM/homeobox protein Lhx8 [Sus scrofa]
gi|238683613|gb|ACR54090.1| LIM homeobox 8 [Sus scrofa]
Length = 295
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SCG I D+YLL+V D+ +H C++C C SL SC+ ++ ++C+ DY R
Sbjct: 14 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRR 70
>gi|440908262|gb|ELR58305.1| LIM/homeobox protein Lhx2, partial [Bos grunniens mutus]
Length = 410
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 50 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 103
>gi|371573882|gb|AEX38311.1| islet [Mnemiopsis leidyi]
Length = 321
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C C PITD+++LRVA ++ +H +C+ C +C L +CF RE K YC+ D+
Sbjct: 11 CAGCRCPITDQFILRVAPNLEWHASCLKCDDCNKFLDENCTCFIREGKPYCKKDF 65
>gi|390339027|ref|XP_781774.3| PREDICTED: insulin gene enhancer protein ISL-1-like
[Strongylocentrotus purpuratus]
Length = 402
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYCRSDY 58
C CG I D+Y+LRVA D+ +H C+ C +C L +C F R+ K YC+ DY
Sbjct: 51 CVGCGGSIQDQYILRVAPDLEWHAACLKCADCCTYLDETCTCFVRDGKPYCKRDY 105
>gi|55728268|emb|CAH90879.1| hypothetical protein [Pongo abelii]
Length = 624
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C +C SL+H + ++ +L+C+ DY +R
Sbjct: 2 CASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYWAR 56
>gi|358411510|ref|XP_589896.5| PREDICTED: LIM/homeobox protein Lhx8 [Bos taurus]
Length = 443
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SCG I D+YLL+V D+ +H C++C C SL SC+ ++ ++C+ DY R
Sbjct: 172 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRR 228
>gi|426356555|ref|XP_004045628.1| PREDICTED: LIM domain kinase 1 [Gorilla gorilla gorilla]
Length = 633
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C +C SL+H + ++ +L+C+ DY +R
Sbjct: 55 CASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYWAR 109
>gi|33304205|gb|AAQ02610.1| LIM domain kinase 1, partial [synthetic construct]
Length = 648
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C +C SL+H + ++ +L+C+ DY +R
Sbjct: 25 CASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYWAR 79
>gi|380786805|gb|AFE65278.1| LIM domain kinase 1 isoform 1 [Macaca mulatta]
gi|383418323|gb|AFH32375.1| LIM domain kinase 1 isoform 1 [Macaca mulatta]
gi|384947016|gb|AFI37113.1| LIM domain kinase 1 isoform 1 [Macaca mulatta]
Length = 647
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C +C SL+H + ++ +L+C+ DY +R
Sbjct: 25 CASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYWAR 79
>gi|334853818|gb|AEH05849.1| Lhx3, partial [Capra hircus]
gi|334853820|gb|AEH05850.1| Lhx3, partial [Capra hircus]
Length = 124
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C C + I DR++L+ D +H C+ C +C LA CF+R +YC+ D+ R
Sbjct: 4 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHAPLAERCFSRGESVYCKDDFFKR 58
>gi|328781528|ref|XP_001121397.2| PREDICTED: LIM/homeobox protein Awh [Apis mellifera]
Length = 352
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
+CG CG + +R +L V ++H C+ C C L HSCF R +LYCR DY
Sbjct: 76 DCGGCGESVRERTVLCVGGRTWHSRCLKCCACARPLHDQHSCFLRGMRLYCRHDY 130
>gi|123299964|dbj|BAF45328.1| LIM homeobox protein 2 [Sus scrofa]
Length = 373
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY R
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 109
>gi|110748616|gb|ABG89861.1| Lhx6, partial [Astyanax mexicanus]
Length = 303
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL SC+ + +++C+ DY SR
Sbjct: 110 CASCGLEILDRYLLKVNNLIWHXRCLECSVCRTSLRQHSSCYIKNKEIFCKMDYFSR 166
>gi|4505001|ref|NP_002305.1| LIM domain kinase 1 isoform 1 [Homo sapiens]
gi|332866745|ref|XP_001148746.2| PREDICTED: LIM domain kinase 1 isoform 1 [Pan troglodytes]
gi|90185240|sp|P53667.3|LIMK1_HUMAN RecName: Full=LIM domain kinase 1; Short=LIMK-1
gi|565280|dbj|BAA05371.1| LIM kinase [Homo sapiens]
gi|119590026|gb|EAW69620.1| LIM domain kinase 1, isoform CRA_a [Homo sapiens]
gi|119590029|gb|EAW69623.1| LIM domain kinase 1, isoform CRA_a [Homo sapiens]
gi|151554981|gb|AAI48341.1| LIM domain kinase 1 [synthetic construct]
gi|157169682|gb|AAI52983.1| LIM domain kinase 1 [synthetic construct]
gi|168279079|dbj|BAG11419.1| LIM domain kinase 1 [synthetic construct]
gi|410223988|gb|JAA09213.1| LIM domain kinase 1 [Pan troglodytes]
gi|410261992|gb|JAA18962.1| LIM domain kinase 1 [Pan troglodytes]
gi|410296294|gb|JAA26747.1| LIM domain kinase 1 [Pan troglodytes]
gi|410339893|gb|JAA38893.1| LIM domain kinase 1 [Pan troglodytes]
Length = 647
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C +C SL+H + ++ +L+C+ DY +R
Sbjct: 25 CASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYWAR 79
>gi|260829945|ref|XP_002609922.1| LIM class homeodomain transcription factor, islet subclass
[Branchiostoma floridae]
gi|229295284|gb|EEN65932.1| LIM class homeodomain transcription factor, islet subclass
[Branchiostoma floridae]
Length = 430
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I D+Y+LRVA D+ +H C+ C +C L +CF RE K YC+ Y
Sbjct: 26 CVGCGSHIHDQYILRVAPDLEWHAACLKCSDCNQYLDETCTCFVREGKTYCKRCY 80
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 6 ECGSCGRPIT-DRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSRK 62
+C C T + +++R + YH +C CV C L RE+ L+C++D++ +
Sbjct: 87 KCAKCSLGFTKNDFVMRARNKIYHIDCFRCVACSRQLIPGDEFALREDGLFCKADHEVLE 146
Query: 63 KGSQLV 68
+ S V
Sbjct: 147 RASNNV 152
>gi|194892543|ref|XP_001977682.1| GG19173 [Drosophila erecta]
gi|190649331|gb|EDV46609.1| GG19173 [Drosophila erecta]
Length = 419
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRSDY 58
C CG+ I DRYLLR D+ +HE+C+ C C L + +T+ N + C+ DY
Sbjct: 162 CAGCGKHIQDRYLLRALDMLWHEDCLKCGCCDCRLGEVGSTLYTKGNLMLCKRDY 216
>gi|350404757|ref|XP_003487210.1| PREDICTED: protein apterous-like [Bombus impatiens]
Length = 550
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DR+ L+ D +H C+ C C L +CF+R+ +YC+ DY
Sbjct: 175 CAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDY 228
>gi|338720511|ref|XP_001502198.3| PREDICTED: LIM/homeobox protein Lhx2-like [Equus caballus]
Length = 373
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF+++ +YC+ DY
Sbjct: 12 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 65
>gi|198437781|ref|XP_002124033.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 402
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHS--CFTRENKLYCRSDYDSR 61
+++C C + I DR L V D +H C+ C C L +S CF ++ ++YCR+DY R
Sbjct: 36 VQKCAGCHQVILDRSYLFVEDSYWHMGCLKCCACAQPLDNSRTCFVKDTRVYCRNDY-KR 94
Query: 62 KKGSQLVT 69
GSQL T
Sbjct: 95 LFGSQLCT 102
>gi|158261347|dbj|BAF82851.1| unnamed protein product [Homo sapiens]
Length = 647
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C +C SL+H + ++ +L+C+ DY +R
Sbjct: 25 CASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYWAR 79
>gi|383850854|ref|XP_003700989.1| PREDICTED: protein apterous-like [Megachile rotundata]
Length = 620
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DR+ L+ D +H C+ C C L +CF+R+ +YC+ DY
Sbjct: 245 CAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDY 298
>gi|224493113|sp|A2I8Z7.1|LHX9_ASTFA RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|121531644|gb|ABM55505.1| LIM/homeobox protein 9 [Astyanax mexicanus]
Length = 377
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 52 CAGCGSKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 108
>gi|124377602|dbj|BAF46218.1| LIM homeobox gene 9 gamma protein [Glandirana rugosa]
Length = 331
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 109
>gi|444727546|gb|ELW68032.1| LIM/homeobox protein Lhx8 [Tupaia chinensis]
Length = 348
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SCG I D+YLL+V D+ +H C++C C SL SC+ ++ ++C+ DY R
Sbjct: 67 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRR 123
>gi|1432164|gb|AAB17545.1| LIM-kinase1 [Homo sapiens]
gi|1657755|gb|AAC13885.1| LIM-kinase [Homo sapiens]
Length = 647
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C +C SL+H + ++ +L+C+ DY +R
Sbjct: 25 CASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYWAR 79
>gi|1432165|gb|AAB17546.1| alternatively spliced LIM-kinase1 [Homo sapiens]
gi|1657756|gb|AAC13886.1| LIM-kinase [Homo sapiens]
Length = 633
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C +C SL+H + ++ +L+C+ DY +R
Sbjct: 11 CASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYWAR 65
>gi|380013576|ref|XP_003690828.1| PREDICTED: LIM/homeobox protein Awh-like [Apis florea]
Length = 351
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
+CG CG + +R +L V ++H C+ C C L HSCF R +LYCR DY
Sbjct: 75 DCGGCGESVRERTVLCVGGRTWHSRCLKCCACARPLHDQHSCFLRGMRLYCRHDY 129
>gi|410986204|ref|XP_003999402.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Felis catus]
Length = 380
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 108
>gi|326924940|ref|XP_003208680.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Meleagris
gallopavo]
Length = 338
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 12 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 68
>gi|383857875|ref|XP_003704429.1| PREDICTED: LIM/homeobox protein Awh-like [Megachile rotundata]
Length = 358
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
+CG CG + +R +L V ++H C+ C C L HSCF R +LYCR DY
Sbjct: 82 DCGGCGESVRERTVLCVGGRTWHSRCLKCCACARPLHDQHSCFLRGMRLYCRHDY 136
>gi|126306417|ref|XP_001367814.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 3 [Monodelphis
domestica]
Length = 380
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 108
>gi|124377600|dbj|BAF46217.1| LIM homeobox gene 9 beta protein [Glandirana rugosa]
Length = 347
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 109
>gi|350404762|ref|XP_003487212.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus impatiens]
Length = 331
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
+CG CG + +R +L V ++H C+ C C L HSCF R +LYCR DY
Sbjct: 55 DCGGCGESVRERTVLCVGGRTWHSRCLKCCACARPLHDQHSCFLRGMRLYCRHDY 109
>gi|344276910|ref|XP_003410248.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Loxodonta africana]
Length = 380
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 108
>gi|301767830|ref|XP_002919335.1| PREDICTED: LIM/homeobox protein Lhx9-like [Ailuropoda melanoleuca]
Length = 447
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 118
>gi|148237976|ref|NP_001079958.1| LIM homeobox 8 [Xenopus laevis]
gi|34784686|gb|AAH57730.1| MGC68912 protein [Xenopus laevis]
Length = 282
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C +CG I D+YLL+V D+ +H C++C C SL SC+ ++ +YC+ DY R
Sbjct: 93 CNNCGMEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIYCKLDYFRR 149
>gi|440907910|gb|ELR57994.1| LIM/homeobox protein Lhx8 [Bos grunniens mutus]
Length = 375
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SCG I D+YLL+V D+ +H C++C C SL SC+ ++ ++C+ DY R
Sbjct: 94 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRR 150
>gi|45382197|ref|NP_990757.1| LIM/homeobox protein Lhx9 [Gallus gallus]
gi|556038|gb|AAA50258.1| homeobox protein [Gallus gallus]
Length = 378
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 108
>gi|340721085|ref|XP_003398956.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus terrestris]
Length = 329
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
+CG CG + +R +L V ++H C+ C C L HSCF R +LYCR DY
Sbjct: 53 DCGGCGESVRERTVLCVGGRTWHSRCLKCCACARPLHDQHSCFLRGMRLYCRHDY 107
>gi|114571656|ref|XP_001139158.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Pan troglodytes]
Length = 399
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 127
>gi|9409734|emb|CAB98128.1| LIM-homeobox 9 [Homo sapiens]
Length = 257
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 13 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 69
>gi|395531047|ref|XP_003767594.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 3 [Sarcophilus
harrisii]
Length = 380
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 108
>gi|215276334|gb|ACJ65031.1| LHX9 [Xenopus laevis]
Length = 399
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 73 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLTLESELTCFAKDGSIYCKEDYYRR 129
>gi|449268141|gb|EMC79011.1| LIM/homeobox protein Lhx9 [Columba livia]
Length = 378
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 108
>gi|402863231|ref|XP_003895934.1| PREDICTED: LIM domain kinase 1 isoform 1 [Papio anubis]
Length = 647
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C +C SL+H + ++ +L+C+ DY +R
Sbjct: 25 CASCGQRIYDGQYLQALNADWHTDCFRCCDCSASLSHQYYEKDGQLFCKKDYWAR 79
>gi|345321290|ref|XP_003430404.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Ornithorhynchus
anatinus]
Length = 347
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SCG I D+YLL+V D+ +H C++C C SL SC+ ++ ++C+ DY R
Sbjct: 66 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRR 122
>gi|311213854|ref|NP_001185656.1| LIM homeobox 9 [Taeniopygia guttata]
Length = 378
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 108
>gi|193575711|ref|XP_001949543.1| PREDICTED: LIM/homeobox protein Lhx2-like [Acyrthosiphon pisum]
Length = 356
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CGR I DR+ L D+ +H C+ C EC L +C++R +YC+ DY
Sbjct: 23 CAGCGRSIDDRFYLSAVDMCWHIGCLQCAECKLPLDTELTCYSRHGNIYCKQDY 76
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 3 NMKECGSCGRPITD-RYLLRVADISYHENCVACVECGHSLAHSCF--TRENKLYCRSDYD 59
++K C C I ++R D+ YH C AC CG L + R+ ++CR DY+
Sbjct: 81 SIKRCARCQGGIGACDLVMRAKDLVYHVECFACYACGAVLCKGDYYGVRDGAVFCRPDYE 140
Query: 60 SRK 62
K
Sbjct: 141 RLK 143
>gi|47217395|emb|CAG00755.1| unnamed protein product [Tetraodon nigroviridis]
Length = 343
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 1 MPNMKE-----CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLY 53
MP+M C CG I+DRY L D +H C+ C EC +L +CF ++ +Y
Sbjct: 1 MPSMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIY 60
Query: 54 CRSDYDSR 61
C+ DY R
Sbjct: 61 CKEDYYRR 68
>gi|224493175|sp|Q90881.2|LHX9_CHICK RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
Length = 397
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 127
>gi|301605176|ref|XP_002932201.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 398
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 72 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 128
>gi|34733869|gb|AAQ81867.1| islet 2 [Ambystoma mexicanum]
Length = 361
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 2 PNMKE----CGSCGRPITDRYLLRVA-DISYHENCVACVECGHSLAHSC--FTRENKLYC 54
PN K C CG I D +++RV+ D+ +H C+ C EC L +C F R+ K YC
Sbjct: 18 PNKKHTLALCVGCGSQIHDPFIMRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYC 77
Query: 55 RSDY 58
+ DY
Sbjct: 78 KRDY 81
>gi|432854590|ref|XP_004067976.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Oryzias latipes]
Length = 378
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 105
>gi|432854592|ref|XP_004067977.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Oryzias latipes]
Length = 380
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 105
>gi|6754542|ref|NP_034844.1| LIM/homeobox protein Lhx9 isoform b [Mus musculus]
gi|6179608|emb|CAB59907.1| putative LIM-homeodomain alpha isoform [Mus musculus]
gi|148707590|gb|EDL39537.1| LIM homeobox protein 9, isoform CRA_b [Mus musculus]
Length = 321
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 118
>gi|403286038|ref|XP_003934314.1| PREDICTED: LIM domain kinase 1 [Saimiri boliviensis boliviensis]
Length = 651
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C +C SL+H + ++ +L+C+ DY +R
Sbjct: 25 CASCGQRICDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGRLFCKKDYWAR 79
>gi|351708127|gb|EHB11046.1| LIM/homeobox protein Lhx9 [Heterocephalus glaber]
Length = 397
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 127
>gi|307206046|gb|EFN84139.1| Rhombotin-1 [Harpegnathos saltator]
Length = 249
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 5 KECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRSDY 58
+EC CG+ IT+RYLL+ D+ +HE+C+ C C L + +T+ N + C+ DY
Sbjct: 18 QECAGCGKTITERYLLKALDLYWHEDCLKCGCCDCRLGEVGSTLYTKANLILCKRDY 74
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 7 CGSCGRPITD-RYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C +C +PI ++R YH +C AC +C H + ENK+ C DY+ R
Sbjct: 84 CAACNKPIPAFEMVMRARTNVYHLDCFACQQCTHRFCVGDRFYLCENKILCEYDYEER 141
>gi|33569216|ref|NP_064589.2| LIM/homeobox protein Lhx9 isoform 1 [Homo sapiens]
gi|73960328|ref|XP_848787.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Canis lupus
familiaris]
gi|332230752|ref|XP_003264559.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Nomascus
leucogenys]
gi|224471883|sp|Q9NQ69.3|LHX9_HUMAN RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|33416232|gb|AAP32471.2| LIM-homeobox 9 protein [Homo sapiens]
gi|119611696|gb|EAW91290.1| LIM homeobox 9, isoform CRA_d [Homo sapiens]
gi|124297089|gb|AAI31623.1| LIM homeobox 9 [Homo sapiens]
gi|355558916|gb|EHH15696.1| hypothetical protein EGK_01820 [Macaca mulatta]
gi|355746065|gb|EHH50690.1| hypothetical protein EGM_01558 [Macaca fascicularis]
Length = 397
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 127
>gi|397505116|ref|XP_003823119.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Pan paniscus]
gi|441624364|ref|XP_004088986.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Nomascus
leucogenys]
Length = 399
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 127
>gi|291402694|ref|XP_002717723.1| PREDICTED: LIM homeobox protein 9-like isoform 1 [Oryctolagus
cuniculus]
Length = 397
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 127
>gi|260828933|ref|XP_002609417.1| LIM class homeodomain transcription factor, Lhx6/8 subclass
[Branchiostoma floridae]
gi|229294773|gb|EEN65427.1| LIM class homeodomain transcription factor, Lhx6/8 subclass
[Branchiostoma floridae]
Length = 292
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDY 58
C CG PI D++LL+V + +H C+ C C L +C+TRE ++C++DY
Sbjct: 51 CTGCGGPIQDKFLLKVGERQWHVKCLRCSVCQTPLGRHTTCYTREADVFCKADY 104
>gi|348578264|ref|XP_003474903.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 3 [Cavia
porcellus]
Length = 321
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 118
>gi|348578260|ref|XP_003474901.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Cavia
porcellus]
Length = 397
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 127
>gi|348536383|ref|XP_003455676.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Oreochromis
niloticus]
Length = 333
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 1 MPNMKE-----CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLY 53
MP+M C CG I+DRY L D +H C+ C EC +L +CF ++ +Y
Sbjct: 62 MPSMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIY 121
Query: 54 CRSDYDSR 61
C+ DY R
Sbjct: 122 CKEDYYRR 129
>gi|224058535|ref|XP_002189228.1| PREDICTED: LIM/homeobox protein Lhx8 [Taeniopygia guttata]
Length = 347
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SCG I D+YLL+V D+ +H C++C C SL SC+ ++ ++C+ DY R
Sbjct: 66 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRR 122
>gi|126306415|ref|XP_001367775.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Monodelphis
domestica]
gi|395531045|ref|XP_003767593.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Sarcophilus
harrisii]
Length = 321
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 118
>gi|395838925|ref|XP_003792355.1| PREDICTED: LIM/homeobox protein Lhx9 [Otolemur garnettii]
Length = 397
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 127
>gi|326924942|ref|XP_003208681.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Meleagris
gallopavo]
Length = 271
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 12 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 68
>gi|354485100|ref|XP_003504722.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Cricetulus
griseus]
gi|118763751|gb|AAI28723.1| Lhx9 protein [Rattus norvegicus]
Length = 321
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 118
>gi|62955397|ref|NP_001017710.1| LIM/homeobox protein Lhx9 isoform 1 [Danio rerio]
gi|62205415|gb|AAH93258.1| LIM homeobox 9 [Danio rerio]
Length = 330
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 1 MPNMKE-----CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLY 53
MP+M C CG I+DRY L D +H C+ C EC +L +CF ++ +Y
Sbjct: 60 MPSMSPERPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIY 119
Query: 54 CRSDYDSR 61
C+ DY R
Sbjct: 120 CKEDYYRR 127
>gi|5738960|dbj|BAA83423.1| LIM-homeodomain (LHX) protein 6.1b [Homo sapiens]
Length = 348
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 126
>gi|390458309|ref|XP_003732088.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Callithrix jacchus]
Length = 348
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 126
>gi|148707589|gb|EDL39536.1| LIM homeobox protein 9, isoform CRA_a [Mus musculus]
Length = 342
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 118
>gi|94957756|ref|NP_001035556.1| LIM/homeobox protein Lhx8 [Gallus gallus]
gi|71800649|gb|AAZ41374.1| LIM homeodomain protein [Gallus gallus]
Length = 347
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SCG I D+YLL+V D+ +H C++C C SL SC+ ++ ++C+ DY R
Sbjct: 66 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRR 122
>gi|410921836|ref|XP_003974389.1| PREDICTED: LIM/homeobox protein Lhx9-like [Takifugu rubripes]
Length = 506
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 1 MPNMKE-----CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLY 53
MP+M C CG I+DRY L D +H C+ C EC +L +CF ++ +Y
Sbjct: 169 MPSMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIY 228
Query: 54 CRSDY 58
C+ DY
Sbjct: 229 CKEDY 233
>gi|119611698|gb|EAW91292.1| LIM homeobox 9, isoform CRA_f [Homo sapiens]
Length = 321
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 118
>gi|390467016|ref|XP_003733685.1| PREDICTED: LOW QUALITY PROTEIN: zyxin [Callithrix jacchus]
Length = 570
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 4 MKECGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFT--RENKLYCRSDY 58
+++C +CG+PITDR +LR +YH C CV C L + F + N+ +C SDY
Sbjct: 439 LEKCNTCGQPITDR-MLRATGKAYHPQCFTCVVCARPLEGTSFIVDQANRPHCVSDY 494
>gi|291402698|ref|XP_002717725.1| PREDICTED: LIM homeobox protein 9-like isoform 3 [Oryctolagus
cuniculus]
Length = 321
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 118
>gi|224493106|sp|A2PZF9.1|LHX9_RANRU RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|124377598|dbj|BAF46216.1| LIM homeobox gene 9 alpha protein [Glandirana rugosa]
Length = 379
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 109
>gi|327276679|ref|XP_003223095.1| PREDICTED: LIM/homeobox protein Lhx8-like [Anolis carolinensis]
Length = 379
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SCG I D+YLL+V D+ +H C++C C SL SC+ ++ ++C+ DY R
Sbjct: 98 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRR 154
>gi|301605174|ref|XP_002932200.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 331
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 72 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 128
>gi|410043123|ref|XP_003312314.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Pan troglodytes]
Length = 348
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 126
>gi|345806125|ref|XP_003435390.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Canis lupus
familiaris]
Length = 392
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DR LL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 99 CASCGLEILDRDLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 155
>gi|322787267|gb|EFZ13403.1| hypothetical protein SINV_03010 [Solenopsis invicta]
Length = 334
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 6 ECGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDY 58
+CG CG + +R +L V ++H C+ C C L HSCF R +LYCR DY
Sbjct: 58 DCGGCGESVRERTVLCVGGRTWHSRCLKCCACARPLHDQHSCFLRGMRLYCRHDY 112
>gi|281354175|gb|EFB29759.1| hypothetical protein PANDA_007956 [Ailuropoda melanoleuca]
Length = 382
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 127
>gi|74355622|gb|AAI03937.1| LIM homeobox 6 [Homo sapiens]
gi|119607921|gb|EAW87515.1| LIM homeobox 6, isoform CRA_a [Homo sapiens]
Length = 348
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 126
>gi|50083287|ref|NP_001001933.1| LIM/homeobox protein Lhx8 isoform 1 [Homo sapiens]
gi|114557210|ref|XP_524738.2| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Pan troglodytes]
gi|297664648|ref|XP_002810744.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Pongo abelii]
gi|397521070|ref|XP_003830626.1| PREDICTED: LIM/homeobox protein Lhx8 [Pan paniscus]
gi|426330048|ref|XP_004026038.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Gorilla gorilla
gorilla]
gi|296434566|sp|Q68G74.2|LHX8_HUMAN RecName: Full=LIM/homeobox protein Lhx8; Short=LIM homeobox protein
8
Length = 356
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SCG I D+YLL+V D+ +H C++C C SL SC+ ++ ++C+ DY R
Sbjct: 75 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRR 131
>gi|124377606|dbj|BAF46220.1| LIM homeobox gene 9 epsilon protein [Glandirana rugosa]
Length = 297
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 109
>gi|444724034|gb|ELW64656.1| LIM/homeobox protein Lhx6 [Tupaia chinensis]
Length = 336
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 48 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 104
>gi|28571257|ref|NP_523402.4| beadex, isoform B [Drosophila melanogaster]
gi|22832512|gb|AAN09472.1| beadex, isoform B [Drosophila melanogaster]
gi|28557589|gb|AAO45200.1| RE72043p [Drosophila melanogaster]
gi|220949014|gb|ACL87050.1| Bx-PA [synthetic construct]
gi|220958192|gb|ACL91639.1| Bx-PA [synthetic construct]
Length = 384
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRSDY 58
C CG+ I DRYLLR D+ +HE+C+ C C L + +T+ N + C+ DY
Sbjct: 163 CAGCGKHIQDRYLLRALDMLWHEDCLKCGCCDCRLGEVGSTLYTKGNLMLCKRDY 217
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 3 NMKECGSCGRPITD-RYLLRVADISYHENCVACVECGHS--LAHSCFTRENKLYCRSDYD 59
N C +C + I ++R YH C AC +C H + + ENK+ C DY+
Sbjct: 223 NTGYCAACSKVIPAFEMVMRARTNVYHLECFACQQCNHRFCVGDRFYLCENKILCEYDYE 282
Query: 60 SRKKGSQLVTVLFYSMYVHSVMKFHTITL 88
R ++F SM H ++K H +L
Sbjct: 283 ER--------LVFASMANHPMLKRHVSSL 303
>gi|124377604|dbj|BAF46219.1| LIM homeobox gene 9 delta protein [Glandirana rugosa]
Length = 312
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 109
>gi|6180221|emb|CAB59908.1| putative LIM homeodomain protein [Mus musculus]
Length = 366
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 40 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 96
>gi|348536385|ref|XP_003455677.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 3 [Oreochromis
niloticus]
Length = 320
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 1 MPNMKE-----CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLY 53
MP+M C CG I+DRY L D +H C+ C EC +L +CF ++ +Y
Sbjct: 62 MPSMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIY 121
Query: 54 CRSDY 58
C+ DY
Sbjct: 122 CKEDY 126
>gi|4587499|gb|AAD25742.1|AF134379_1 LIM domain kinase 1 splice variant [Homo sapiens]
gi|119590027|gb|EAW69621.1| LIM domain kinase 1, isoform CRA_b [Homo sapiens]
gi|119590028|gb|EAW69622.1| LIM domain kinase 1, isoform CRA_b [Homo sapiens]
Length = 305
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAHSCFTRENKLYCRSDYDSR 61
C SCG+ I D L+ + +H +C C +C SL+H + ++ +L+C+ DY +R
Sbjct: 25 CASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYWAR 79
>gi|198467349|ref|XP_002134510.1| GA22333 [Drosophila pseudoobscura pseudoobscura]
gi|198149202|gb|EDY73137.1| GA22333 [Drosophila pseudoobscura pseudoobscura]
Length = 407
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH---SCFTRENKLYCRSDY 58
C CG+ I DRYLLR D+ +HE+C+ C C L + +T+ N + C+ DY
Sbjct: 186 CAGCGKHIQDRYLLRALDMLWHEDCLKCGCCDCRLGEVGSTLYTKGNLMLCKRDY 240
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 3 NMKECGSCGRPITD-RYLLRVADISYHENCVACVECGHS--LAHSCFTRENKLYCRSDYD 59
N C +C + I ++R YH C AC +C H + + ENK+ C DY+
Sbjct: 246 NTGYCAACSKVIPAFEMVMRARTNVYHLECFACQQCNHRFCVGDRFYLCENKILCEYDYE 305
Query: 60 SRKKGSQLVTVLFYSMYVHSVMKFHTITL 88
R ++F SM H ++K H +L
Sbjct: 306 ER--------LVFASMANHPMLKRHVSSL 326
>gi|70909340|ref|NP_001020736.1| LIM/homeobox protein Lhx9 isoform a [Mus musculus]
gi|49119043|gb|AAH72623.1| LIM homeobox protein 9 [Mus musculus]
Length = 330
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 127
>gi|332222205|ref|XP_003260257.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Nomascus
leucogenys]
Length = 356
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SCG I D+YLL+V D+ +H C++C C SL SC+ ++ ++C+ DY R
Sbjct: 75 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRR 131
>gi|383853636|ref|XP_003702328.1| PREDICTED: LIM domain only protein 3-like [Megachile rotundata]
Length = 249
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 5 KECGSCGRPITDRYLLRVADISYHENCV--ACVECG-HSLAHSCFTRENKLYCRSDY 58
+EC CG+ IT+RYLL+ D+ +HE+C+ C EC + + +T+ N + C+ DY
Sbjct: 18 QECAGCGKTITERYLLKALDLYWHEDCLKCGCCECRLGEVGSTLYTKANLILCKRDY 74
>gi|355745377|gb|EHH50002.1| hypothetical protein EGM_00758, partial [Macaca fascicularis]
Length = 320
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SCG I D+YLL+V D+ +H C++C C SL SC+ ++ ++C+ DY R
Sbjct: 39 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRR 95
>gi|344254817|gb|EGW10921.1| LIM/homeobox protein Lhx9 [Cricetulus griseus]
Length = 311
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 108
>gi|432853477|ref|XP_004067726.1| PREDICTED: LIM/homeobox protein Lhx8 [Oryzias latipes]
Length = 338
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C +C I D+YLL+V D+ +H C++C C SL SC+ +E +++C+ DY R
Sbjct: 55 CANCNEEIVDKYLLKVNDLCWHVRCLSCSVCQTSLGSHASCYIKEKEIFCKLDYFRR 111
>gi|74355157|gb|AAI03939.1| LIM homeobox 6 [Homo sapiens]
Length = 362
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSL--AHSCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL +SC+ + +++C+ DY SR
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSR 126
>gi|4809142|gb|AAD30110.1|AF134761_1 LIM-homeodomain type transcription factor Lhx9 [Mus musculus]
Length = 300
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 118
>gi|6180222|emb|CAB59909.1| putative LIM homeodomain protein [Mus musculus]
Length = 299
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 40 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 96
>gi|51494804|gb|AAH40321.1| LIM homeobox 8 [Homo sapiens]
gi|312150920|gb|ADQ31972.1| LIM homeobox 8 [synthetic construct]
Length = 356
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SCG I D+YLL+V D+ +H C++C C SL SC+ ++ ++C+ DY R
Sbjct: 75 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRR 131
>gi|348513701|ref|XP_003444380.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oreochromis niloticus]
Length = 375
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SCG I DRYLL+V ++ +H C+ C C SL SC+ + +++C+ DY SR
Sbjct: 97 CASCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQHSSCYIKNKEIFCKMDYFSR 153
>gi|297278964|ref|XP_001097664.2| PREDICTED: LIM/homeobox protein Lhx8-like [Macaca mulatta]
gi|402854981|ref|XP_003892128.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Papio anubis]
Length = 356
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SCG I D+YLL+V D+ +H C++C C SL SC+ ++ ++C+ DY R
Sbjct: 75 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRR 131
>gi|281354377|gb|EFB29961.1| hypothetical protein PANDA_005098 [Ailuropoda melanoleuca]
Length = 351
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C SCG I D+YLL+V D+ +H C++C C SL SC+ ++ ++C+ DY R
Sbjct: 70 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRR 126
>gi|27923333|gb|AAO27570.1| LIM-homeodomain type transcription factor Lhx9 [Rattus
norvegicus]
Length = 325
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 7 CGSCGRPITDRYLLRVADISYHENCVACVECGHSLAH--SCFTRENKLYCRSDYDSR 61
C CG I+DRY L D +H C+ C EC +L +CF ++ +YC+ DY R
Sbjct: 40 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRR 96
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.327 0.137 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,707,375,325
Number of Sequences: 23463169
Number of extensions: 56364983
Number of successful extensions: 185123
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1695
Number of HSP's successfully gapped in prelim test: 1829
Number of HSP's that attempted gapping in prelim test: 178913
Number of HSP's gapped (non-prelim): 6691
length of query: 124
length of database: 8,064,228,071
effective HSP length: 90
effective length of query: 34
effective length of database: 5,952,542,861
effective search space: 202386457274
effective search space used: 202386457274
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 69 (31.2 bits)