Your job contains 1 sequence.
>psy1544
MSNSSTSPNPPPPQQQQPPLNVGQLPMGAPGSGPPGSPGPSPGQAPGQNPQENLTALQRA
IDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQQLRFQIMAYRLLARNQPLTPQL
AMGVQGKRMEGVPSGPQMPPMSLHGPMPMPPSQPMPNQAQPMPLQQQPPPQPHQQQGHIS
SQIKQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIE
LRALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVE
AERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAEKEQKKEQERIE
KERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTQMVKEHKMEQKKKQDEES
KKRKQSVKQKLMDTDGKVTLDQDETSQLTDMHISVREISSGKVLKGEDAPLAAHLKQWIQ
DHPGWEVVADSDEENEDEDSEKSKEKTSGENENKEKNKGEDDEYNKNAMEEATYYSIAHT
VHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLM
EKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLL
TTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNK
LPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLL
RRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEKGKQGKGGAKALMN
TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHR
VLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRA
GGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAA
RYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSE
EEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGS
RQRKQVDYTDSLTEKEWLKAIDDGVEYDDEEEEEEEEVRSKRKGKRRKKTEDDDEEPSTS
KKRKKEKEKDREKDQAKLKKTLKKIMRVVIKYTDSDGRVLSEPFIKLPSRKELPDYYEVI
DRPMDIKKILGRIEDGKYSSVDELQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKAR
QRVESGEDPDE
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1544
(1331 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0000212 - symbol:brm "brahma" species:7227 "Drosop... 3440 0. 3
MGI|MGI:88192 - symbol:Smarca4 "SWI/SNF related, matrix a... 2506 0. 5
RGD|621728 - symbol:Smarca4 "SWI/SNF related, matrix asso... 2506 0. 5
UNIPROTKB|G3V790 - symbol:Smarca4 "SWI/SNF related, matri... 2506 0. 5
UNIPROTKB|A7Z019 - symbol:SMARCA4 "Transcription activato... 2506 0. 5
UNIPROTKB|E2RJ89 - symbol:SMARCA4 "Uncharacterized protei... 2506 0. 5
UNIPROTKB|F1M6Y4 - symbol:Smarca4 "Transcription activato... 2499 0. 5
ZFIN|ZDB-GENE-030605-1 - symbol:smarca4 "SWI/SNF related,... 2483 0. 5
UNIPROTKB|F1MJ46 - symbol:SMARCA4 "Transcription activato... 2477 0. 5
UNIPROTKB|E1C2F7 - symbol:E1C2F7 "Uncharacterized protein... 2469 0. 5
MGI|MGI:99603 - symbol:Smarca2 "SWI/SNF related, matrix a... 2466 0. 5
UNIPROTKB|E9PTG1 - symbol:Smarca2 "Protein Smarca2" speci... 2466 0. 4
UNIPROTKB|E2RKP4 - symbol:SMARCA2 "Uncharacterized protei... 2466 0. 4
UNIPROTKB|A5PKK5 - symbol:SMARCA2 "SMARCA2 protein" speci... 2466 0. 4
UNIPROTKB|P51531 - symbol:SMARCA2 "Probable global transc... 2466 0. 4
UNIPROTKB|J9P5P2 - symbol:SMARCA2 "Uncharacterized protei... 2466 0. 4
UNIPROTKB|F1SJG5 - symbol:SMARCA2 "Uncharacterized protei... 2466 0. 4
UNIPROTKB|D4A4J2 - symbol:Smarca2 "Protein Smarca2" speci... 2466 0. 3
RGD|1302988 - symbol:Smarca2 "SWI/SNF related, matrix ass... 2447 0. 4
ZFIN|ZDB-GENE-030131-5964 - symbol:smarca2 "SWI/SNF relat... 2446 0. 4
UNIPROTKB|P51532 - symbol:SMARCA4 "Transcription activato... 2200 0. 6
UNIPROTKB|Q9HBD4 - symbol:SMARCA4 "SMARCA4 isoform 2" spe... 2200 0. 6
UNIPROTKB|D4AA07 - symbol:Smarca4 "Transcription activato... 2200 0. 3
WB|WBGene00004204 - symbol:swsn-4 species:6239 "Caenorhab... 2132 1.2e-311 4
UNIPROTKB|K7GT64 - symbol:LOC100622433 "Uncharacterized p... 2200 1.1e-289 3
UNIPROTKB|F1S594 - symbol:LOC100622433 "Uncharacterized p... 2458 1.5e-285 2
POMBASE|SPAC1250.01 - symbol:snf21 "ATP-dependent DNA hel... 1927 5.6e-243 4
ASPGD|ASPL0000042729 - symbol:AN2278 species:162425 "Emer... 1934 3.1e-242 4
WB|WBGene00016868 - symbol:C52B9.8 species:6239 "Caenorha... 2056 7.0e-239 3
SGD|S000005816 - symbol:SNF2 "Catalytic subunit of the SW... 1900 1.1e-233 5
POMBASE|SPCC1620.14c - symbol:snf22 "ATP-dependent DNA he... 1865 1.3e-233 4
CGD|CAL0005444 - symbol:SNF2 species:5476 "Candida albica... 1918 6.5e-232 4
UNIPROTKB|Q5AM49 - symbol:SNF2 "Putative uncharacterized ... 1918 6.5e-232 4
CGD|CAL0003962 - symbol:orf19.239 species:5476 "Candida a... 1912 1.2e-230 3
SGD|S000001388 - symbol:STH1 "ATPase component of the RSC... 1885 1.1e-225 3
DICTYBASE|DDB_G0271052 - symbol:snf2b "SNF2-related prote... 1835 1.9e-219 4
DICTYBASE|DDB_G0285205 - symbol:snf2a "SNF2-related prote... 1492 1.6e-176 4
TAIR|locus:2062840 - symbol:SYD "SPLAYED" species:3702 "A... 1486 1.3e-167 3
TAIR|locus:2150270 - symbol:CHR23 "chromatin remodeling 2... 1473 1.2e-163 3
CGD|CAL0005422 - symbol:ISW2 species:5476 "Candida albica... 1188 4.3e-133 4
UNIPROTKB|Q5A310 - symbol:ISW2 "Putative uncharacterized ... 1188 4.3e-133 4
UNIPROTKB|P28370 - symbol:SMARCA1 "Probable global transc... 1197 1.5e-126 3
UNIPROTKB|F6TQG2 - symbol:SMARCA1 "Probable global transc... 1197 1.5e-126 3
UNIPROTKB|K7GLQ2 - symbol:SMARCA1 "Uncharacterized protei... 1191 1.9e-126 3
UNIPROTKB|K7GMM0 - symbol:SMARCA1 "Uncharacterized protei... 1191 1.9e-126 3
UNIPROTKB|F1RTI9 - symbol:SMARCA1 "Uncharacterized protei... 1188 4.0e-126 3
RGD|1561046 - symbol:Smarca1 "SWI/SNF related, matrix ass... 1178 8.2e-126 3
GENEDB_PFALCIPARUM|PFB0730w - symbol:PFB0730w "DNA helica... 822 1.7e-124 5
UNIPROTKB|O96239 - symbol:PFB0730w "DEAD/DEAH box helicas... 822 1.7e-124 5
TAIR|locus:2062999 - symbol:BRM "AT2G46020" species:3702 ... 1112 1.4e-123 4
SGD|S000000966 - symbol:CHD1 "Chromatin remodeler that re... 1076 4.5e-115 3
CGD|CAL0001390 - symbol:orf19.3035 species:5476 "Candida ... 1078 3.1e-114 3
UNIPROTKB|H0YGM3 - symbol:SMARCA4 "Transcription activato... 888 4.3e-111 2
TAIR|locus:2173644 - symbol:CHR1 "chromatin remodeling 1"... 1081 2.1e-109 1
UNIPROTKB|F1N166 - symbol:SMARCA1 "Uncharacterized protei... 1033 2.7e-109 3
CGD|CAL0000801 - symbol:orf19.1720 species:5476 "Candida ... 669 3.9e-109 3
UNIPROTKB|Q5AJ72 - symbol:CaO19.1720 "Putative uncharacte... 669 3.9e-109 3
UNIPROTKB|E1BS47 - symbol:CHD7 "Chromodomain-helicase-DNA... 999 9.5e-109 4
POMBASE|SPAC3G6.01 - symbol:hrp3 "ATP-dependent DNA helic... 1064 1.3e-107 1
UNIPROTKB|F1PWD8 - symbol:CHD7 "Uncharacterized protein" ... 1016 1.8e-106 5
UNIPROTKB|F6XTU7 - symbol:SMARCA1 "Uncharacterized protei... 976 4.0e-106 4
ZFIN|ZDB-GENE-030131-9923 - symbol:hells "helicase, lymph... 611 9.1e-106 3
FB|FBgn0023395 - symbol:Chd3 "Chd3" species:7227 "Drosoph... 1015 1.1e-105 2
ZFIN|ZDB-GENE-041014-72 - symbol:ino80 "INO80 homolog (S.... 679 1.0e-104 3
UNIPROTKB|F1NSG3 - symbol:CHD7 "Chromodomain-helicase-DNA... 1012 1.7e-104 4
RGD|1310969 - symbol:Ino80 "INO80 homolog (S. cerevisiae)... 680 2.1e-104 4
UNIPROTKB|Q9P2D1 - symbol:CHD7 "Chromodomain-helicase-DNA... 1014 2.2e-104 4
UNIPROTKB|F1P5V4 - symbol:HELLS "Uncharacterized protein"... 598 3.1e-104 3
UNIPROTKB|F1N734 - symbol:CHD6 "Uncharacterized protein" ... 993 1.6e-103 4
MGI|MGI:2444748 - symbol:Chd7 "chromodomain helicase DNA ... 1014 1.9e-103 4
UNIPROTKB|Q06A37 - symbol:CHD7 "Chromodomain-helicase-DNA... 1012 2.0e-103 4
UNIPROTKB|E1BPM4 - symbol:CHD7 "Uncharacterized protein" ... 1008 2.2e-103 4
UNIPROTKB|E1BAN8 - symbol:INO80 "Uncharacterized protein"... 673 2.5e-103 4
MGI|MGI:1915392 - symbol:Ino80 "INO80 homolog (S. cerevis... 670 3.4e-103 4
UNIPROTKB|F1NYY9 - symbol:INO80 "Uncharacterized protein"... 671 3.4e-103 3
UNIPROTKB|F1PKX5 - symbol:INO80 "Uncharacterized protein"... 673 3.9e-103 4
UNIPROTKB|F1SSV0 - symbol:INO80 "Uncharacterized protein"... 673 4.0e-103 4
UNIPROTKB|Q9ULG1 - symbol:INO80 "DNA helicase INO80" spec... 672 5.1e-103 4
RGD|1311921 - symbol:Chd7 "chromodomain helicase DNA bind... 1015 6.6e-103 3
ZFIN|ZDB-GENE-070912-179 - symbol:chd7 "chromodomain heli... 1019 6.7e-103 3
ASPGD|ASPL0000056677 - symbol:AN1024 species:162425 "Emer... 633 9.2e-103 3
ZFIN|ZDB-GENE-030131-6320 - symbol:chd8 "chromodomain hel... 966 1.1e-102 4
UNIPROTKB|E1BCV0 - symbol:HELLS "Uncharacterized protein"... 592 1.9e-102 3
UNIPROTKB|Q8TD26 - symbol:CHD6 "Chromodomain-helicase-DNA... 994 4.6e-102 3
UNIPROTKB|F1PTH3 - symbol:CHD6 "Uncharacterized protein" ... 996 7.4e-102 3
UNIPROTKB|J9P0F6 - symbol:CHD6 "Uncharacterized protein" ... 996 7.4e-102 3
UNIPROTKB|F1SC64 - symbol:HELLS "Uncharacterized protein"... 596 1.0e-101 3
UNIPROTKB|Q9NRZ9 - symbol:HELLS "Lymphoid-specific helica... 591 1.2e-101 3
ASPGD|ASPL0000047400 - symbol:AN2285 species:162425 "Emer... 664 1.5e-101 3
UNIPROTKB|F1NVT7 - symbol:CHD6 "Uncharacterized protein" ... 972 1.8e-101 2
UNIPROTKB|E2QW28 - symbol:HELLS "Uncharacterized protein"... 593 5.8e-101 3
UNIPROTKB|H3BTW3 - symbol:CHD9 "Chromodomain-helicase-DNA... 975 5.9e-101 2
RGD|1565642 - symbol:Srcap "Snf2-related CREBBP activator... 659 2.6e-100 3
UNIPROTKB|E1BC33 - symbol:LOC788113 "Uncharacterized prot... 659 3.5e-100 3
UNIPROTKB|F1RT88 - symbol:CHD7 "Uncharacterized protein" ... 971 6.3e-100 4
POMBASE|SPAC11E3.01c - symbol:swr1 "SNF2 family helicase ... 638 1.0e-99 3
UNIPROTKB|Q6ZRS2 - symbol:SRCAP "Helicase SRCAP" species:... 659 1.2e-99 3
MGI|MGI:106209 - symbol:Hells "helicase, lymphoid specifi... 583 1.6e-99 3
FB|FBgn0086613 - symbol:Ino80 "Ino80" species:7227 "Droso... 635 2.0e-99 3
UNIPROTKB|F1RG74 - symbol:SRCAP "Uncharacterized protein"... 659 2.4e-99 3
WARNING: Descriptions of 533 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0000212 [details] [associations]
symbol:brm "brahma" species:7227 "Drosophila melanogaster"
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISS;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=NAS]
[GO:0003713 "transcription coactivator activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0035060 "brahma
complex" evidence=IDA;TAS] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IGI] [GO:0035172 "hemocyte proliferation" evidence=TAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0007474 "imaginal disc-derived wing vein specification"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0006911 "phagocytosis,
engulfment" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IGI]
[GO:0008586 "imaginal disc-derived wing vein morphogenesis"
evidence=IMP] [GO:0008587 "imaginal disc-derived wing margin
morphogenesis" evidence=IMP] [GO:0045742 "positive regulation of
epidermal growth factor receptor signaling pathway" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0043974 "histone H3-K27
acetylation" evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045893 GO:GO:0006911 EMBL:AE014296 GO:GO:0003677
GO:GO:0008586 GO:GO:0007474 GO:GO:0048477 GO:GO:0006351
GO:GO:0016887 GO:GO:0007517 GO:GO:0007409 GO:GO:0004386
GO:GO:0045742 GO:GO:0007480 GO:GO:0045749 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0008587 KO:K11647 EMBL:M85049
EMBL:AY095048 EMBL:BT009972 PIR:A42091 RefSeq:NP_536745.4
RefSeq:NP_536746.1 RefSeq:NP_730088.1 RefSeq:NP_730089.1
UniGene:Dm.5356 ProteinModelPortal:P25439 SMR:P25439 DIP:DIP-36728N
IntAct:P25439 MINT:MINT-6541230 STRING:P25439 PaxDb:P25439
EnsemblMetazoa:FBtr0075525 EnsemblMetazoa:FBtr0075526 GeneID:39744
KEGG:dme:Dmel_CG5942 CTD:39744 FlyBase:FBgn0000212
GeneTree:ENSGT00550000074659 InParanoid:P25439 OMA:QKKYTIS
OrthoDB:EOG4K3JB3 PhylomeDB:P25439 ChiTaRS:SMARCA2 GenomeRNAi:39744
NextBio:815155 Bgee:P25439 GermOnline:CG5942 GO:GO:0035060
GO:GO:0070983 GO:GO:0035172 GO:GO:0043974 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 Uniprot:P25439
Length = 1638
Score = 3440 (1216.0 bits), Expect = 0., Sum P(3) = 0.
Identities = 680/997 (68%), Positives = 779/997 (78%)
Query: 184 KQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRA 243
K +++T + KP GLDP+ +LQERENR+A I R++EL L +T+ E LR++A IELRA
Sbjct: 389 KPNRITTVAKPVGLDPITLLQERENRIAARISLRMQELQ-RLPATMSEDLRLQAAIELRA 447
Query: 244 LKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAER 303
L+VLNFQRQLR E + C RRDTTLETA+N+K YKRTKRQGL+EARATEKLEKQQK+EAER
Sbjct: 448 LRVLNFQRQLRMEFVQCTRRDTTLETALNIKLYKRTKRQGLREARATEKLEKQQKLEAER 507
Query: 304 KKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXXXX 363
K+RQKH E++ VLQH KD +E+HRNN+A++ R+NKAVMN+HANA
Sbjct: 508 KRRQKHLEFLAAVLQHGKDLREFHRNNKAQLARMNKAVMNHHANAEREQKKEQERIEKER 567
Query: 364 XXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXXXXXXX 423
LMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLT
Sbjct: 568 MRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTQMVKQHKDDQMKKKEEEGKRL 627
Query: 424 XXSVKQKLMDTDGKVTLDQDETSQLTDMHISVREISSGKVLKGEDAPLAAHLKQWIQDHP 483
K+ LM G+ + DE S + DM + V E +GK L G+DAP+ HL +W+ HP
Sbjct: 628 IQFKKELLMS--GEY-IGIDEGSIVADMRVHVVEQCTGKKLTGDDAPMLKHLHRWLNMHP 684
Query: 484 GWEVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAM-------------- 529
GW+ + A
Sbjct: 685 GWDWIDDEEDSCGSNDDHKPKVEEQPTATEDATDKAQATGNDEDAKDLITKAKVEDDEYR 744
Query: 530 -EEATYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGK 588
EE TYYSIAHT+HE V EQASI+VNG LKEYQIKGLEW+VSL+NNNLNGILADEMGLGK
Sbjct: 745 TEEQTYYSIAHTIHEKVVEQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGK 804
Query: 589 TIQTIALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ 648
TIQTI+L+TYLM++KKV GP+LIIVPLSTL NW LEFE+WAP+V VV+YKGSP R+ LQ
Sbjct: 805 TIQTISLVTYLMDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQ 864
Query: 649 AQMKASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPH 708
QM+A+KFNVLLTTYEYVIKDK LAK+ WKYMIIDEGHRMKNHHCKLT +LNT Y+AP+
Sbjct: 865 NQMRATKFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPY 924
Query: 709 RLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILII 768
RLLLTGTPLQNKLPELWALLNFLLPSIFKS STFEQWFNAPFATTGEKVELNEEETILII
Sbjct: 925 RLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILII 984
Query: 769 RRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXX 828
RRLHKVLRPFLLRRLKKEVE QLPDKVEYIIKCDMS LQ+VLY+HM +KG+LLTDGSE
Sbjct: 985 RRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKG 1044
Query: 829 XXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLD 888
LMNTIVQLRKLCNHPFMFQ+IEEK+ DH GG G+VSGPDLYRVSGKFELLD
Sbjct: 1045 KHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLYRVSGKFELLD 1104
Query: 889 RILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPD 948
RILPKLK+T HRVLLFCQMTQ M I+EDY +R F Y+RLDGTTKAEDRG+LL+KFNA
Sbjct: 1105 RILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKG 1164
Query: 949 SEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMT 1008
S+ F+F+LSTRAGGLGLNLQTADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRLMT
Sbjct: 1165 SDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMT 1224
Query: 1009 VNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPD 1068
VNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSER QFLQTILHQDD E+EEEN VPD
Sbjct: 1225 VNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDNEEEEENEVPD 1284
Query: 1069 DETVNQMLARSEEEFQTYQRIDAERRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWA 1124
DE +N M+ARSEEE + ++R+DAER+KE + + RLI+ SELPDWL K+D+E+E++
Sbjct: 1285 DEMINMMIARSEEEIEIFKRMDAERKKEDEEIHPGRERLIDESELPDWLTKDDDEVERFH 1344
Query: 1125 FEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
++ E+ +GRGSRQRK+VDYTDSLTEKEWLKAI
Sbjct: 1345 YQYDEDTI---LGRGSRQRKEVDYTDSLTEKEWLKAI 1378
Score = 344 (126.2 bits), Expect = 0., Sum P(3) = 0.
Identities = 67/104 (64%), Positives = 83/104 (79%)
Query: 1225 IMRVVIKYTDSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDEL 1284
IM VIK+ + DGR LSEPF+KLPSR+ LPDYYE+I RP+DIKKIL RIED KY+ ++EL
Sbjct: 1433 IMSAVIKH-NQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIEDCKYADLNEL 1491
Query: 1285 QKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGED 1328
+KDF LC+NAQIYNEE SLI+ DS+ L+ VF ARQR+ + D
Sbjct: 1492 EKDFMQLCQNAQIYNEEASLIYLDSIALQKVFVGARQRITAAAD 1535
Score = 213 (80.0 bits), Expect = 0., Sum P(3) = 0.
Identities = 47/91 (51%), Positives = 61/91 (67%)
Query: 51 QENLTALQRAIDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSA-QVQQLRFQIMAYRL 109
QENL ALQRAIDSM+E+GL+EDPRY +L+ M+A KH + QV LR QI AYRL
Sbjct: 135 QENLHALQRAIDSMEEKGLQEDPRYSQLLAMRATS---KHQHLNGNQVNLLRTQITAYRL 191
Query: 110 LARNQPLTPQLAMGVQGKRMEGVPSGPQMPP 140
LARN+P++ Q+ +Q + + P P PP
Sbjct: 192 LARNKPISMQMQQALQAAQQQPPPGPPIGPP 222
Score = 57 (25.1 bits), Expect = 6.1e-44, Sum P(3) = 6.1e-44
Identities = 31/120 (25%), Positives = 51/120 (42%)
Query: 1037 DQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKE 1096
++K E H + ++ DE + + DD+ V + + +E+ T + +RKE
Sbjct: 1308 ERKKEDEEIHPGRERLI---DESELPDWLTKDDDEVERFHYQYDED--TILGRGSRQRKE 1362
Query: 1097 QGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQ-RKQVDYTDSLTEK 1155
L E +WL D+ E F+ +EEE R R+ RK+ DSL K
Sbjct: 1363 VDYTDSLTE----KEWLKAIDDGAE---FDEEEEEDDSKRKRRKRKNRKEESDDDSLILK 1415
Score = 53 (23.7 bits), Expect = 1.6e-43, Sum P(3) = 1.6e-43
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 277 KRTKRQGLKEARATEKL----EKQQKVEAERKKRQKHQEYITTVLQHCKD 322
KR KR+ KE + L ++Q ++ +R K+Q H+ ++ V++H +D
Sbjct: 1396 KRRKRKNRKEESDDDSLILKRRRRQNLD-KRSKKQMHK-IMSAVIKHNQD 1443
Score = 46 (21.3 bits), Expect = 0., Sum P(3) = 0.
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 129 MEGVPSGPQMPPMSLHG 145
M+ P+GP M P HG
Sbjct: 90 MQMPPTGPNMSPYQTHG 106
Score = 40 (19.1 bits), Expect = 3.6e-42, Sum P(3) = 3.6e-42
Identities = 17/68 (25%), Positives = 34/68 (50%)
Query: 1056 DD--EEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQG--KKSRLIEVSELPD 1111
DD E DEEE DD + ++ +E + +RR+ Q K+S+ ++ ++
Sbjct: 1379 DDGAEFDEEEEE--DDSKRKRRKRKNRKEESDDDSLILKRRRRQNLDKRSKK-QMHKIMS 1435
Query: 1112 WLIKEDEE 1119
+IK +++
Sbjct: 1436 AVIKHNQD 1443
Score = 39 (18.8 bits), Expect = 7.1e-26, Sum P(3) = 7.1e-26
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 62 DSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQQ 99
+ M+ E++ Y+KLI+ K ++ + AF +Q +
Sbjct: 566 ERMRRLMAEDEEGYRKLIDQKKDK---RLAFLLSQTDE 600
>MGI|MGI:88192 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0000902 "cell morphogenesis" evidence=IMP]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001832 "blastocyst growth"
evidence=IMP] [GO:0001835 "blastocyst hatching" evidence=IMP]
[GO:0001889 "liver development" evidence=IMP] [GO:0002039 "p53
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006337 "nucleosome disassembly" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO;IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0007403 "glial cell fate determination"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IMP;TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IDA] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0030216 "keratinocyte
differentiation" evidence=IMP] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IMP] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0043388
"positive regulation of DNA binding" evidence=IGI] [GO:0043923
"positive regulation by host of viral transcription" evidence=ISO]
[GO:0043966 "histone H3 acetylation" evidence=IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0048562 "embryonic
organ morphogenesis" evidence=IMP] [GO:0048730 "epidermis
morphogenesis" evidence=IMP] [GO:0050681 "androgen receptor
binding" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] [GO:0071564 "npBAF complex" evidence=ISO;IDA]
[GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778 "WINAC
complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 MGI:MGI:88192
GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0045944
GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 EMBL:CH466522
GO:GO:0006351 GO:GO:0003682 GO:GO:0016887 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0000902 GO:GO:0004386 GO:GO:0001570 GO:GO:0035116
GO:GO:0005719 GO:GO:0030902 GO:GO:0048730 GO:GO:0000977
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0019827 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 HOGENOM:HOG000172363
HOVERGEN:HBG056636 GO:GO:0035887 OrthoDB:EOG418BMJ CTD:6597
EMBL:AK147285 EMBL:AK160825 EMBL:AK166837 EMBL:BC079560
IPI:IPI00875789 IPI:IPI00955124 RefSeq:NP_001167549.1
RefSeq:NP_001167550.1 RefSeq:NP_035547.2 UniGene:Mm.286593
ProteinModelPortal:Q3TKT4 SMR:Q3TKT4 DIP:DIP-40650N DIP:DIP-59249N
IntAct:Q3TKT4 MINT:MINT-1958721 STRING:Q3TKT4 PhosphoSite:Q3TKT4
PaxDb:Q3TKT4 PRIDE:Q3TKT4 Ensembl:ENSMUST00000034707
Ensembl:ENSMUST00000098948 Ensembl:ENSMUST00000174008 GeneID:20586
KEGG:mmu:20586 UCSC:uc009omd.2 UCSC:uc009ome.2 InParanoid:Q3TUD7
NextBio:298883 Bgee:Q3TKT4 Genevestigator:Q3TKT4 Uniprot:Q3TKT4
Length = 1613
Score = 2506 (887.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 477/634 (75%), Positives = 550/634 (86%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY++AH V E V +Q++++VNG LK+YQIKGLEW+VSL+NNNLNGILADEMGLGKTIQT
Sbjct: 730 SYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQT 789
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IALITYLME K++NGPFLIIVPLSTLSNW+ EF++WAPSV V+YKGSP R+ Q++
Sbjct: 790 IALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLR 849
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFNVLLTTYEY+IKDK LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP RLLL
Sbjct: 850 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 909
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGEKV+LNEEETILIIRRLH
Sbjct: 910 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLH 969
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVE+QLP+KVEY+IKCDMS LQ+VLYRHM KG+LLTDGSE
Sbjct: 970 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGK 1029
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSG-IVSGPDLYRVSGKFELLDRIL 891
LMNTI+QLRK+CNHP+MFQ+IEE FS+H+G +G IV G DLYR SGKFELLDRIL
Sbjct: 1030 GGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRIL 1089
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL++T H+VLLFCQMT LM I+EDYF+YRGFKY+RLDGTTKAEDRG LLK FN P SEY
Sbjct: 1090 PKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEY 1149
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIF+LSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 1150 FIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1209
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDET 1071
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +E+DEEE+ VPDDET
Sbjct: 1210 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEQDEEEDEVPDDET 1268
Query: 1072 VNQMLARSEEEFQTYQRIDAERRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEA 1127
VNQM+AR EEEF + R+D +RR+E+ + K RL+E ELP W+IK+D E+E+ E
Sbjct: 1269 VNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCE- 1327
Query: 1128 KEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+EEEK GRGSR RK+VDY+DSLTEK+WLKAI
Sbjct: 1328 EEEEKMF--GRGSRHRKEVDYSDSLTEKQWLKAI 1359
Score = 771 (276.5 bits), Expect = 0., Sum P(5) = 0.
Identities = 162/310 (52%), Positives = 204/310 (65%)
Query: 184 KQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRA 243
KQS++T I KP GLDP+ ILQERE R+ I RI+EL +L +L LR KA IEL+A
Sbjct: 348 KQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELE-NLPGSLAGDLRTKATIELKA 406
Query: 244 LKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAER 303
L++LNFQRQLR EV+ C RRDT LETA+N KAYKR+KRQ L+EAR TEKLEKQQK+E ER
Sbjct: 407 LRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER 466
Query: 304 KKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXXXX 363
K+RQKHQEY+ ++LQH KDF+EYHR+ ++ +L KAV YHAN
Sbjct: 467 KRRQKHQEYLNSILQHAKDFREYHRSVTGKLQKLTKAVATYHANTEREQKKENERIEKER 526
Query: 364 XXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXXXXXXX 423
LMAEDEEGYRKLIDQKKDKRLA+LL QTDEY++NLT
Sbjct: 527 MRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKK- 585
Query: 424 XXSVKQKLMDTDGKVTL---DQ---DETSQLTDMHISVREISSGKVLKGEDAPLAAHLKQ 477
K+K + +G+ D DETSQ++D+ + V + SGK+L G DAP A L+
Sbjct: 586 ----KKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEA 641
Query: 478 WIQDHPGWEV 487
W++ +PG+EV
Sbjct: 642 WLEMNPGYEV 651
Score = 318 (117.0 bits), Expect = 0., Sum P(5) = 0.
Identities = 62/106 (58%), Positives = 82/106 (77%)
Query: 1225 IMRVVIKYTDSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDEL 1284
I+ VIKY DS GR LSE FI+LPSRKELP+YYE+I +P+D KKI RI + KY S+++L
Sbjct: 1432 IVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDL 1491
Query: 1285 QKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPD 1330
+KD LC+NAQ +N E SLI+EDS+VL+SVFT RQ++E +D +
Sbjct: 1492 EKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSE 1537
Score = 126 (49.4 bits), Expect = 0., Sum P(5) = 0.
Identities = 29/54 (53%), Positives = 35/54 (64%)
Query: 92 FTSAQVQQLRFQIMAYRLLARNQPLTPQLAMGVQGKR-MEGVPSG-PQMPPMSL 143
F Q+ QLR QIMAY++LAR QPL L M VQGKR M G+ P +PP S+
Sbjct: 172 FNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSV 225
Score = 76 (31.8 bits), Expect = 0., Sum P(5) = 0.
Identities = 11/29 (37%), Positives = 22/29 (75%)
Query: 50 PQENLTALQRAIDSMKEQGLEEDPRYQKL 78
PQ+N+ + + ++SM E+G+ +DPRY ++
Sbjct: 65 PQDNMHQMHKPMESMHEKGMPDDPRYNQM 93
Score = 59 (25.8 bits), Expect = 2.9e-35, Sum P(4) = 2.9e-35
Identities = 32/129 (24%), Positives = 61/129 (47%)
Query: 1028 EKVIQAGMFDQKSTGSERHQ-FLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTY 1086
EK+ + +Q+ ++HQ +L +IL Q ++ E + +V L + + TY
Sbjct: 454 EKLEKQQKIEQERKRRQKHQEYLNSIL-QHAKDFREYH-----RSVTGKLQKLTKAVATY 507
Query: 1087 QRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQV 1146
A +EQ K++ IE + L+ EDEE + + K++++ ++ +Q
Sbjct: 508 H---ANTEREQKKENERIEKERMRR-LMAEDEEGYRKLIDQKKDKRLAYL------LQQT 557
Query: 1147 D-YTDSLTE 1154
D Y +LTE
Sbjct: 558 DEYVANLTE 566
Score = 56 (24.8 bits), Expect = 3.2e-87, Sum P(4) = 3.2e-87
Identities = 27/143 (18%), Positives = 64/143 (44%)
Query: 998 KNEVRVLRLMTVNSVEERILA----AARYKLN----MDEKVIQAGMFDQKSTGSERHQFL 1049
K +R + ++N +E+ ++ A + L ++ ++ +F E+
Sbjct: 1477 KERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1536
Query: 1050 QTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRK-EQGKKSRLIEVSE 1108
+ +++EE EEE + + +V + +E + R+ RR+ +G +++ + VS+
Sbjct: 1537 EGEESEEEEEGEEEGSESESRSVKVKIKLGRKE-KAQDRLKGGRRRPSRGSRAKPV-VSD 1594
Query: 1109 LPDWLIKEDEEIEQWAFEAKEEE 1131
D E+E+ E + EE+
Sbjct: 1595 -DD---SEEEQEEDRSGSGSEED 1613
Score = 49 (22.3 bits), Expect = 3.1e-34, Sum P(4) = 3.1e-34
Identities = 23/112 (20%), Positives = 50/112 (44%)
Query: 989 QDRAHRIGQKNEVRVL-RLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQ 1047
Q+R +R+ + R+ R+ + ++ + R K ++ K ++ F + + Q
Sbjct: 368 QEREYRL----QARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQR-----QLRQ 418
Query: 1048 FLQTILHQDDEEDEEENAVPDDETVNQML--ARSEEEFQTYQRIDAERRKEQ 1097
+ + +D + NA + Q L AR E+ + Q+I+ ER++ Q
Sbjct: 419 EVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQ 470
Score = 47 (21.6 bits), Expect = 5.0e-34, Sum P(4) = 5.0e-34
Identities = 20/82 (24%), Positives = 44/82 (53%)
Query: 1054 HQDDE-EDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIE--VSELP 1110
H + E E ++EN + E + +++A EE ++ + ID ++ K + + V+ L
Sbjct: 508 HANTEREQKKENERIEKERMRRLMAEDEEGYR--KLIDQKKDKRLAYLLQQTDEYVANLT 565
Query: 1111 DWLIKEDEEIEQWAFEAKEEEK 1132
+ L+++ + Q A E K+++K
Sbjct: 566 E-LVRQ-HKAAQVAKEKKKKKK 585
Score = 43 (20.2 bits), Expect = 8.2e-23, Sum P(2) = 8.2e-23
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 1050 QTILHQDDE--EDEEENAVPDDETVNQM 1075
Q +HQ + E E +PDD NQM
Sbjct: 66 QDNMHQMHKPMESMHEKGMPDDPRYNQM 93
Score = 41 (19.5 bits), Expect = 3.8e-115, Sum P(5) = 3.8e-115
Identities = 13/64 (20%), Positives = 27/64 (42%)
Query: 1037 DQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKE 1096
D + +GSE + +++EE++ + A P V + + + +DA E
Sbjct: 656 DSEESGSEEEE-------EEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIE 708
Query: 1097 QGKK 1100
K+
Sbjct: 709 NAKQ 712
Score = 41 (19.5 bits), Expect = 2.9e-86, Sum P(5) = 2.9e-86
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 1283 ELQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+L D K + A +++++ S HE L+++ Q E E PD+
Sbjct: 1221 KLNVDQKVI--QAGMFDQKSSS-HERRAFLQAILEHEEQDEEEDEVPDD 1266
Score = 40 (19.1 bits), Expect = 4.9e-115, Sum P(5) = 4.9e-115
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 1063 ENA---VPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIK 1115
ENA V D+ V+Q LAR Q+Y + + K+S L+ L + IK
Sbjct: 708 ENAKQDVDDEYGVSQALARG---LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIK 760
Score = 38 (18.4 bits), Expect = 1.1e-293, Sum P(3) = 1.1e-293
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 62 DSMKEQGLEEDPRYQKLIEMKANR 85
+ M+ E++ Y+KLI+ K ++
Sbjct: 525 ERMRRLMAEDEEGYRKLIDQKKDK 548
Score = 37 (18.1 bits), Expect = 5.3e-33, Sum P(4) = 5.3e-33
Identities = 9/42 (21%), Positives = 19/42 (45%)
Query: 267 LETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQK 308
+E V K R +++ + +T + + + E K+QK
Sbjct: 1367 IEEEVRQKKSSRKRKRDSEAGSSTPTTSTRSRDKDEESKKQK 1408
>RGD|621728 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=ISO] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001832 "blastocyst
growth" evidence=ISO] [GO:0001835 "blastocyst hatching"
evidence=ISO] [GO:0001889 "liver development" evidence=ISO]
[GO:0002039 "p53 binding" evidence=ISO] [GO:0003407 "neural retina
development" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin"
evidence=ISO] [GO:0005726 "perichromatin fibrils" evidence=ISO]
[GO:0006337 "nucleosome disassembly" evidence=ISO;IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA;ISO] [GO:0007403 "glial cell fate determination"
evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0019827 "stem cell
maintenance" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO]
[GO:0030216 "keratinocyte differentiation" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030900 "forebrain development" evidence=ISO] [GO:0030902
"hindbrain development" evidence=ISO] [GO:0030957 "Tat protein
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IDA] [GO:0043388 "positive regulation of DNA
binding" evidence=ISO] [GO:0043923 "positive regulation by host of
viral transcription" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0048562 "embryonic organ
morphogenesis" evidence=ISO] [GO:0048730 "epidermis morphogenesis"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0060318
"definitive erythrocyte differentiation" evidence=ISO] [GO:0060347
"heart trabecula formation" evidence=ISO] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=ISO]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO;ISS] [GO:0071565 "nBAF
complex" evidence=ISO;ISS] [GO:0071778 "WINAC complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0003714
GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677
GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363
HOVERGEN:HBG056636 EMBL:AJ504723 IPI:IPI00781891 UniGene:Rn.23417
ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 STRING:Q8K1P7
PhosphoSite:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 ArrayExpress:Q8K1P7
Genevestigator:Q8K1P7 Uniprot:Q8K1P7
Length = 1613
Score = 2506 (887.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 477/634 (75%), Positives = 550/634 (86%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY++AH V E V +Q++++VNG LK+YQIKGLEW+VSL+NNNLNGILADEMGLGKTIQT
Sbjct: 730 SYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQT 789
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IALITYLME K++NGPFLIIVPLSTLSNW+ EF++WAPSV V+YKGSP R+ Q++
Sbjct: 790 IALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLR 849
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFNVLLTTYEY+IKDK LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP RLLL
Sbjct: 850 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 909
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGEKV+LNEEETILIIRRLH
Sbjct: 910 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLH 969
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVE+QLP+KVEY+IKCDMS LQ+VLYRHM KG+LLTDGSE
Sbjct: 970 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGK 1029
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSG-IVSGPDLYRVSGKFELLDRIL 891
LMNTI+QLRK+CNHP+MFQ+IEE FS+H+G +G IV G DLYR SGKFELLDRIL
Sbjct: 1030 GGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRIL 1089
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL++T H+VLLFCQMT LM I+EDYF+YRGFKY+RLDGTTKAEDRG LLK FN P SEY
Sbjct: 1090 PKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEY 1149
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIF+LSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 1150 FIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1209
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDET 1071
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +E+DEEE+ VPDDET
Sbjct: 1210 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEQDEEEDEVPDDET 1268
Query: 1072 VNQMLARSEEEFQTYQRIDAERRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEA 1127
VNQM+AR EEEF + R+D +RR+E+ + K RL+E ELP W+IK+D E+E+ E
Sbjct: 1269 VNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCE- 1327
Query: 1128 KEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+EEEK GRGSR RK+VDY+DSLTEK+WLKAI
Sbjct: 1328 EEEEKMF--GRGSRHRKEVDYSDSLTEKQWLKAI 1359
Score = 770 (276.1 bits), Expect = 0., Sum P(5) = 0.
Identities = 162/310 (52%), Positives = 204/310 (65%)
Query: 184 KQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRA 243
KQS++T I KP GLDP+ ILQERE R+ I RI+EL +L +L LR KA IEL+A
Sbjct: 348 KQSRITPIQKPRGLDPVEILQEREYRLQARIVHRIQELE-NLPGSLAGDLRTKATIELKA 406
Query: 244 LKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAER 303
L++LNFQRQLR EV+ C RRDT LETA+N KAYKR+KRQ L+EAR TEKLEKQQK+E ER
Sbjct: 407 LRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER 466
Query: 304 KKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXXXX 363
K+RQKHQEY+ ++LQH KDF+EYHR+ ++ +L KAV YHAN
Sbjct: 467 KRRQKHQEYLNSILQHAKDFREYHRSVTGKLQKLTKAVATYHANTEREQKKENERIEKER 526
Query: 364 XXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXXXXXXX 423
LMAEDEEGYRKLIDQKKDKRLA+LL QTDEY++NLT
Sbjct: 527 MRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKK- 585
Query: 424 XXSVKQKLMDTDGKVTL---DQ---DETSQLTDMHISVREISSGKVLKGEDAPLAAHLKQ 477
K+K + +G+ D DETSQ++D+ + V + SGK+L G DAP A L+
Sbjct: 586 ----KKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEA 641
Query: 478 WIQDHPGWEV 487
W++ +PG+EV
Sbjct: 642 WLEMNPGYEV 651
Score = 318 (117.0 bits), Expect = 0., Sum P(5) = 0.
Identities = 62/106 (58%), Positives = 82/106 (77%)
Query: 1225 IMRVVIKYTDSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDEL 1284
I+ VIKY DS GR LSE FI+LPSRKELP+YYE+I +P+D KKI RI + KY S+++L
Sbjct: 1432 IVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDL 1491
Query: 1285 QKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPD 1330
+KD LC+NAQ +N E SLI+EDS+VL+SVFT RQ++E +D +
Sbjct: 1492 EKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSE 1537
Score = 126 (49.4 bits), Expect = 0., Sum P(5) = 0.
Identities = 29/54 (53%), Positives = 35/54 (64%)
Query: 92 FTSAQVQQLRFQIMAYRLLARNQPLTPQLAMGVQGKR-MEGVPSG-PQMPPMSL 143
F Q+ QLR QIMAY++LAR QPL L M VQGKR M G+ P +PP S+
Sbjct: 172 FNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSV 225
Score = 76 (31.8 bits), Expect = 0., Sum P(5) = 0.
Identities = 11/29 (37%), Positives = 22/29 (75%)
Query: 50 PQENLTALQRAIDSMKEQGLEEDPRYQKL 78
PQ+N+ + + ++SM E+G+ +DPRY ++
Sbjct: 65 PQDNMHQMHKPMESMHEKGMPDDPRYNQM 93
Score = 59 (25.8 bits), Expect = 2.9e-35, Sum P(4) = 2.9e-35
Identities = 32/129 (24%), Positives = 61/129 (47%)
Query: 1028 EKVIQAGMFDQKSTGSERHQ-FLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTY 1086
EK+ + +Q+ ++HQ +L +IL Q ++ E + +V L + + TY
Sbjct: 454 EKLEKQQKIEQERKRRQKHQEYLNSIL-QHAKDFREYH-----RSVTGKLQKLTKAVATY 507
Query: 1087 QRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQV 1146
A +EQ K++ IE + L+ EDEE + + K++++ ++ +Q
Sbjct: 508 H---ANTEREQKKENERIEKERMRR-LMAEDEEGYRKLIDQKKDKRLAYL------LQQT 557
Query: 1147 D-YTDSLTE 1154
D Y +LTE
Sbjct: 558 DEYVANLTE 566
Score = 53 (23.7 bits), Expect = 9.6e-87, Sum P(4) = 9.6e-87
Identities = 26/143 (18%), Positives = 64/143 (44%)
Query: 998 KNEVRVLRLMTVNSVEERILA----AARYKLN----MDEKVIQAGMFDQKSTGSERHQFL 1049
K +R + ++N +E+ ++ A + L ++ ++ +F E+
Sbjct: 1477 KERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1536
Query: 1050 QTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRK-EQGKKSRLIEVSE 1108
+ +++EE EEE + + +V + +E + R+ RR+ +G +++ + VS+
Sbjct: 1537 EGEESEEEEEGEEEGSESESRSVKVKIKLGRKE-KAQDRLKGGRRRPSRGSRAKPV-VSD 1594
Query: 1109 LPDWLIKEDEEIEQWAFEAKEEE 1131
D ++E+ E + EE+
Sbjct: 1595 -DD---SDEEQEEDRSGSGSEED 1613
Score = 51 (23.0 bits), Expect = 1.9e-34, Sum P(4) = 1.9e-34
Identities = 23/112 (20%), Positives = 51/112 (45%)
Query: 989 QDRAHRIGQKNEVRVL-RLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQ 1047
Q+R +R+ + R++ R+ + ++ + R K ++ K ++ F + + Q
Sbjct: 368 QEREYRL----QARIVHRIQELENLPGSLAGDLRTKATIELKALRLLNFQR-----QLRQ 418
Query: 1048 FLQTILHQDDEEDEEENAVPDDETVNQML--ARSEEEFQTYQRIDAERRKEQ 1097
+ + +D + NA + Q L AR E+ + Q+I+ ER++ Q
Sbjct: 419 EVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQ 470
Score = 47 (21.6 bits), Expect = 5.0e-34, Sum P(4) = 5.0e-34
Identities = 20/82 (24%), Positives = 44/82 (53%)
Query: 1054 HQDDE-EDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIE--VSELP 1110
H + E E ++EN + E + +++A EE ++ + ID ++ K + + V+ L
Sbjct: 508 HANTEREQKKENERIEKERMRRLMAEDEEGYR--KLIDQKKDKRLAYLLQQTDEYVANLT 565
Query: 1111 DWLIKEDEEIEQWAFEAKEEEK 1132
+ L+++ + Q A E K+++K
Sbjct: 566 E-LVRQ-HKAAQVAKEKKKKKK 585
Score = 43 (20.2 bits), Expect = 8.2e-23, Sum P(2) = 8.2e-23
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 1050 QTILHQDDE--EDEEENAVPDDETVNQM 1075
Q +HQ + E E +PDD NQM
Sbjct: 66 QDNMHQMHKPMESMHEKGMPDDPRYNQM 93
Score = 41 (19.5 bits), Expect = 5.7e-115, Sum P(5) = 5.7e-115
Identities = 13/64 (20%), Positives = 27/64 (42%)
Query: 1037 DQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKE 1096
D + +GSE + +++EE++ + A P V + + + +DA E
Sbjct: 656 DSEESGSEEEE-------EEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIE 708
Query: 1097 QGKK 1100
K+
Sbjct: 709 NAKQ 712
Score = 41 (19.5 bits), Expect = 4.3e-86, Sum P(5) = 4.3e-86
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 1283 ELQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+L D K + A +++++ S HE L+++ Q E E PD+
Sbjct: 1221 KLNVDQKVI--QAGMFDQKSSS-HERRAFLQAILEHEEQDEEEDEVPDD 1266
Score = 40 (19.1 bits), Expect = 7.3e-115, Sum P(5) = 7.3e-115
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 1063 ENA---VPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIK 1115
ENA V D+ V+Q LAR Q+Y + + K+S L+ L + IK
Sbjct: 708 ENAKQDVDDEYGVSQALARG---LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIK 760
Score = 38 (18.4 bits), Expect = 1.1e-293, Sum P(3) = 1.1e-293
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 62 DSMKEQGLEEDPRYQKLIEMKANR 85
+ M+ E++ Y+KLI+ K ++
Sbjct: 525 ERMRRLMAEDEEGYRKLIDQKKDK 548
Score = 37 (18.1 bits), Expect = 5.3e-33, Sum P(4) = 5.3e-33
Identities = 9/42 (21%), Positives = 19/42 (45%)
Query: 267 LETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQK 308
+E V K R +++ + +T + + + E K+QK
Sbjct: 1367 IEEEVRQKKSSRKRKRDSEAGSSTPTTSTRSRDKDEESKKQK 1408
>UNIPROTKB|G3V790 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4, isoform
CRA_b" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835
"blastocyst hatching" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IEA]
[GO:0007403 "glial cell fate determination" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030216 "keratinocyte differentiation" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0030902
"hindbrain development" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA]
[GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0060318
"definitive erythrocyte differentiation" evidence=IEA] [GO:0060347
"heart trabecula formation" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:CH473993
UniGene:Rn.23417 Ensembl:ENSRNOT00000013165 Uniprot:G3V790
Length = 1614
Score = 2506 (887.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 477/634 (75%), Positives = 550/634 (86%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY++AH V E V +Q++++VNG LK+YQIKGLEW+VSL+NNNLNGILADEMGLGKTIQT
Sbjct: 730 SYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQT 789
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IALITYLME K++NGPFLIIVPLSTLSNW+ EF++WAPSV V+YKGSP R+ Q++
Sbjct: 790 IALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLR 849
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFNVLLTTYEY+IKDK LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP RLLL
Sbjct: 850 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 909
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGEKV+LNEEETILIIRRLH
Sbjct: 910 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLH 969
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVE+QLP+KVEY+IKCDMS LQ+VLYRHM KG+LLTDGSE
Sbjct: 970 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGK 1029
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSG-IVSGPDLYRVSGKFELLDRIL 891
LMNTI+QLRK+CNHP+MFQ+IEE FS+H+G +G IV G DLYR SGKFELLDRIL
Sbjct: 1030 GGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRIL 1089
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL++T H+VLLFCQMT LM I+EDYF+YRGFKY+RLDGTTKAEDRG LLK FN P SEY
Sbjct: 1090 PKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEY 1149
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIF+LSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 1150 FIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1209
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDET 1071
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +E+DEEE+ VPDDET
Sbjct: 1210 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEQDEEEDEVPDDET 1268
Query: 1072 VNQMLARSEEEFQTYQRIDAERRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEA 1127
VNQM+AR EEEF + R+D +RR+E+ + K RL+E ELP W+IK+D E+E+ E
Sbjct: 1269 VNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCE- 1327
Query: 1128 KEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+EEEK GRGSR RK+VDY+DSLTEK+WLKAI
Sbjct: 1328 EEEEKMF--GRGSRHRKEVDYSDSLTEKQWLKAI 1359
Score = 771 (276.5 bits), Expect = 0., Sum P(5) = 0.
Identities = 162/310 (52%), Positives = 204/310 (65%)
Query: 184 KQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRA 243
KQS++T I KP GLDP+ ILQERE R+ I RI+EL +L +L LR KA IEL+A
Sbjct: 348 KQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELE-NLPGSLAGDLRTKATIELKA 406
Query: 244 LKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAER 303
L++LNFQRQLR EV+ C RRDT LETA+N KAYKR+KRQ L+EAR TEKLEKQQK+E ER
Sbjct: 407 LRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER 466
Query: 304 KKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXXXX 363
K+RQKHQEY+ ++LQH KDF+EYHR+ ++ +L KAV YHAN
Sbjct: 467 KRRQKHQEYLNSILQHAKDFREYHRSVTGKLQKLTKAVATYHANTEREQKKENERIEKER 526
Query: 364 XXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXXXXXXX 423
LMAEDEEGYRKLIDQKKDKRLA+LL QTDEY++NLT
Sbjct: 527 MRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKK- 585
Query: 424 XXSVKQKLMDTDGKVTL---DQ---DETSQLTDMHISVREISSGKVLKGEDAPLAAHLKQ 477
K+K + +G+ D DETSQ++D+ + V + SGK+L G DAP A L+
Sbjct: 586 ----KKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEA 641
Query: 478 WIQDHPGWEV 487
W++ +PG+EV
Sbjct: 642 WLEMNPGYEV 651
Score = 309 (113.8 bits), Expect = 0., Sum P(5) = 0.
Identities = 62/107 (57%), Positives = 82/107 (76%)
Query: 1225 IMRVVIKYTDSD-GRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDE 1283
I+ VIKY DS GR LSE FI+LPSRKELP+YYE+I +P+D KKI RI + KY S+++
Sbjct: 1432 IVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 1491
Query: 1284 LQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPD 1330
L+KD LC+NAQ +N E SLI+EDS+VL+SVFT RQ++E +D +
Sbjct: 1492 LEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSE 1538
Score = 126 (49.4 bits), Expect = 0., Sum P(5) = 0.
Identities = 29/54 (53%), Positives = 35/54 (64%)
Query: 92 FTSAQVQQLRFQIMAYRLLARNQPLTPQLAMGVQGKR-MEGVPSG-PQMPPMSL 143
F Q+ QLR QIMAY++LAR QPL L M VQGKR M G+ P +PP S+
Sbjct: 172 FNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSV 225
Score = 76 (31.8 bits), Expect = 0., Sum P(5) = 0.
Identities = 11/29 (37%), Positives = 22/29 (75%)
Query: 50 PQENLTALQRAIDSMKEQGLEEDPRYQKL 78
PQ+N+ + + ++SM E+G+ +DPRY ++
Sbjct: 65 PQDNMHQMHKPMESMHEKGMPDDPRYNQM 93
Score = 59 (25.8 bits), Expect = 2.7e-34, Sum P(4) = 2.7e-34
Identities = 32/129 (24%), Positives = 61/129 (47%)
Query: 1028 EKVIQAGMFDQKSTGSERHQ-FLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTY 1086
EK+ + +Q+ ++HQ +L +IL Q ++ E + +V L + + TY
Sbjct: 454 EKLEKQQKIEQERKRRQKHQEYLNSIL-QHAKDFREYH-----RSVTGKLQKLTKAVATY 507
Query: 1087 QRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQV 1146
A +EQ K++ IE + L+ EDEE + + K++++ ++ +Q
Sbjct: 508 H---ANTEREQKKENERIEKERMRR-LMAEDEEGYRKLIDQKKDKRLAYL------LQQT 557
Query: 1147 D-YTDSLTE 1154
D Y +LTE
Sbjct: 558 DEYVANLTE 566
Score = 53 (23.7 bits), Expect = 6.7e-87, Sum P(4) = 6.7e-87
Identities = 26/143 (18%), Positives = 64/143 (44%)
Query: 998 KNEVRVLRLMTVNSVEERILA----AARYKLN----MDEKVIQAGMFDQKSTGSERHQFL 1049
K +R + ++N +E+ ++ A + L ++ ++ +F E+
Sbjct: 1478 KERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1537
Query: 1050 QTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRK-EQGKKSRLIEVSE 1108
+ +++EE EEE + + +V + +E + R+ RR+ +G +++ + VS+
Sbjct: 1538 EGEESEEEEEGEEEGSESESRSVKVKIKLGRKE-KAQDRLKGGRRRPSRGSRAKPV-VSD 1595
Query: 1109 LPDWLIKEDEEIEQWAFEAKEEE 1131
D ++E+ E + EE+
Sbjct: 1596 -DD---SDEEQEEDRSGSGSEED 1614
Score = 49 (22.3 bits), Expect = 2.9e-33, Sum P(4) = 2.9e-33
Identities = 23/112 (20%), Positives = 50/112 (44%)
Query: 989 QDRAHRIGQKNEVRVL-RLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQ 1047
Q+R +R+ + R+ R+ + ++ + R K ++ K ++ F + + Q
Sbjct: 368 QEREYRL----QARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQR-----QLRQ 418
Query: 1048 FLQTILHQDDEEDEEENAVPDDETVNQML--ARSEEEFQTYQRIDAERRKEQ 1097
+ + +D + NA + Q L AR E+ + Q+I+ ER++ Q
Sbjct: 419 EVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQ 470
Score = 47 (21.6 bits), Expect = 4.7e-33, Sum P(4) = 4.7e-33
Identities = 20/82 (24%), Positives = 44/82 (53%)
Query: 1054 HQDDE-EDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIE--VSELP 1110
H + E E ++EN + E + +++A EE ++ + ID ++ K + + V+ L
Sbjct: 508 HANTEREQKKENERIEKERMRRLMAEDEEGYR--KLIDQKKDKRLAYLLQQTDEYVANLT 565
Query: 1111 DWLIKEDEEIEQWAFEAKEEEK 1132
+ L+++ + Q A E K+++K
Sbjct: 566 E-LVRQ-HKAAQVAKEKKKKKK 585
Score = 43 (20.2 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 1050 QTILHQDDE--EDEEENAVPDDETVNQM 1075
Q +HQ + E E +PDD NQM
Sbjct: 66 QDNMHQMHKPMESMHEKGMPDDPRYNQM 93
Score = 41 (19.5 bits), Expect = 3.4e-114, Sum P(5) = 3.4e-114
Identities = 13/64 (20%), Positives = 27/64 (42%)
Query: 1037 DQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKE 1096
D + +GSE + +++EE++ + A P V + + + +DA E
Sbjct: 656 DSEESGSEEEE-------EEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIE 708
Query: 1097 QGKK 1100
K+
Sbjct: 709 NAKQ 712
Score = 41 (19.5 bits), Expect = 2.9e-86, Sum P(5) = 2.9e-86
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 1283 ELQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+L D K + A +++++ S HE L+++ Q E E PD+
Sbjct: 1221 KLNVDQKVI--QAGMFDQKSSS-HERRAFLQAILEHEEQDEEEDEVPDD 1266
Score = 40 (19.1 bits), Expect = 4.3e-114, Sum P(5) = 4.3e-114
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 1063 ENA---VPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIK 1115
ENA V D+ V+Q LAR Q+Y + + K+S L+ L + IK
Sbjct: 708 ENAKQDVDDEYGVSQALARG---LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIK 760
Score = 38 (18.4 bits), Expect = 9.4e-293, Sum P(3) = 9.4e-293
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 62 DSMKEQGLEEDPRYQKLIEMKANR 85
+ M+ E++ Y+KLI+ K ++
Sbjct: 525 ERMRRLMAEDEEGYRKLIDQKKDK 548
Score = 37 (18.1 bits), Expect = 5.0e-32, Sum P(4) = 5.0e-32
Identities = 9/42 (21%), Positives = 19/42 (45%)
Query: 267 LETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQK 308
+E V K R +++ + +T + + + E K+QK
Sbjct: 1367 IEEEVRQKKSSRKRKRDSEAGSSTPTTSTRSRDKDEESKKQK 1408
>UNIPROTKB|A7Z019 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=ISS] [GO:0071564
"npBAF complex" evidence=ISS] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0071565 GO:GO:0000902
GO:GO:0004386 GO:GO:0001570 GO:GO:0035116 GO:GO:0005719
GO:GO:0030902 GO:GO:0048730 GO:GO:0000977 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347 GO:GO:0043966
GO:GO:0043388 KO:K11647 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
OrthoDB:EOG418BMJ EMBL:BC153216 IPI:IPI00693529
RefSeq:NP_001099084.1 UniGene:Bt.27590 ProteinModelPortal:A7Z019
SMR:A7Z019 STRING:A7Z019 PRIDE:A7Z019 GeneID:414274 KEGG:bta:414274
CTD:6597 InParanoid:A7Z019 NextBio:20818684 ArrayExpress:A7Z019
Uniprot:A7Z019
Length = 1606
Score = 2506 (887.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 477/634 (75%), Positives = 550/634 (86%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY++AH V E V +Q++++VNG LK+YQIKGLEW+VSL+NNNLNGILADEMGLGKTIQT
Sbjct: 722 SYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQT 781
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IALITYLME K++NGPFLIIVPLSTLSNW+ EF++WAPSV V+YKGSP R+ Q++
Sbjct: 782 IALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLR 841
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFNVLLTTYEY+IKDK LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP RLLL
Sbjct: 842 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 901
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGEKV+LNEEETILIIRRLH
Sbjct: 902 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLH 961
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVE+QLP+KVEY+IKCDMS LQ+VLYRHM KG+LLTDGSE
Sbjct: 962 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGK 1021
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSG-IVSGPDLYRVSGKFELLDRIL 891
LMNTI+QLRK+CNHP+MFQ+IEE FS+H+G +G IV G DLYR SGKFELLDRIL
Sbjct: 1022 GGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRIL 1081
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL++T H+VLLFCQMT LM I+EDYF+YRGFKY+RLDGTTKAEDRG LLK FN P SEY
Sbjct: 1082 PKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEY 1141
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIF+LSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 1142 FIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1201
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDET 1071
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +E+DEEE+ VPDDET
Sbjct: 1202 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEQDEEEDEVPDDET 1260
Query: 1072 VNQMLARSEEEFQTYQRIDAERRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEA 1127
VNQM+AR EEEF + R+D +RR+E+ + K RL+E ELP W+IK+D E+E+ E
Sbjct: 1261 VNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCE- 1319
Query: 1128 KEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+EEEK GRGSR RK+VDY+DSLTEK+WLKAI
Sbjct: 1320 EEEEKMF--GRGSRHRKEVDYSDSLTEKQWLKAI 1351
Score = 776 (278.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 164/310 (52%), Positives = 204/310 (65%)
Query: 184 KQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRA 243
KQS++T I KP GLDP+ ILQERE R+ I RI+EL +L +L LR KA IEL+A
Sbjct: 340 KQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELE-NLPGSLAGDLRTKATIELKA 398
Query: 244 LKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAER 303
L++LNFQRQLR EV+ C RRDT LETA+N KAYKR+KRQ L+EAR TEKLEKQQK+E ER
Sbjct: 399 LRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER 458
Query: 304 KKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXXXX 363
K+RQKHQEY+ ++LQH KDFKEYHR+ +I +L KAV YHAN
Sbjct: 459 KRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKER 518
Query: 364 XXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXXXXXXX 423
LMAEDEEGYRKLIDQKKDKRLA+LL QTDEY++NLT
Sbjct: 519 MRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKK- 577
Query: 424 XXSVKQKLMDTDGKVTL---DQ---DETSQLTDMHISVREISSGKVLKGEDAPLAAHLKQ 477
K+K + +G+ D DETSQ++D+ + V + SGK+L G DAP A L+
Sbjct: 578 ----KKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEA 633
Query: 478 WIQDHPGWEV 487
W++ +PG+EV
Sbjct: 634 WLEMNPGYEV 643
Score = 309 (113.8 bits), Expect = 0., Sum P(5) = 0.
Identities = 62/107 (57%), Positives = 82/107 (76%)
Query: 1225 IMRVVIKYTDSD-GRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDE 1283
I+ VIKY DS GR LSE FI+LPSRKELP+YYE+I +P+D KKI RI + KY S+++
Sbjct: 1424 IVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 1483
Query: 1284 LQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPD 1330
L+KD LC+NAQ +N E SLI+EDS+VL+SVFT RQ++E +D +
Sbjct: 1484 LEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSE 1530
Score = 133 (51.9 bits), Expect = 0., Sum P(5) = 0.
Identities = 30/54 (55%), Positives = 36/54 (66%)
Query: 92 FTSAQVQQLRFQIMAYRLLARNQPLTPQLAMGVQGKR-MEGV-PSGPQMPPMSL 143
F Q+ QLR QIMAY++LAR QPL L M VQGKR M G+ P P +PP S+
Sbjct: 172 FNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQPQMPALPPPSV 225
Score = 76 (31.8 bits), Expect = 0., Sum P(5) = 0.
Identities = 11/29 (37%), Positives = 22/29 (75%)
Query: 50 PQENLTALQRAIDSMKEQGLEEDPRYQKL 78
PQ+N+ + + ++SM E+G+ +DPRY ++
Sbjct: 65 PQDNMHQMHKPMESMHEKGMSDDPRYTQM 93
Score = 59 (25.8 bits), Expect = 5.1e-35, Sum P(4) = 5.1e-35
Identities = 31/130 (23%), Positives = 61/130 (46%)
Query: 1028 EKVIQAGMFDQKSTGSERHQ-FLQTIL-HQDDEEDEEENAVPDDETVNQMLARSEEEFQT 1085
EK+ + +Q+ ++HQ +L +IL H D ++ + + + + +A T
Sbjct: 446 EKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVA-------T 498
Query: 1086 YQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQ 1145
Y A +EQ K++ IE + L+ EDEE + + K++++ ++ +Q
Sbjct: 499 YH---ANTEREQKKENERIEKERMRR-LMAEDEEGYRKLIDQKKDKRLAYL------LQQ 548
Query: 1146 VD-YTDSLTE 1154
D Y +LTE
Sbjct: 549 TDEYVANLTE 558
Score = 56 (24.8 bits), Expect = 1.1e-88, Sum P(4) = 1.1e-88
Identities = 27/143 (18%), Positives = 64/143 (44%)
Query: 998 KNEVRVLRLMTVNSVEERILA----AARYKLN----MDEKVIQAGMFDQKSTGSERHQFL 1049
K +R + ++N +E+ ++ A + L ++ ++ +F E+
Sbjct: 1470 KERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1529
Query: 1050 QTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRK-EQGKKSRLIEVSE 1108
+ +++EE EEE + + +V + +E + R+ RR+ +G +++ + VS+
Sbjct: 1530 EGEESEEEEEGEEEGSESESRSVKVKIKLGRKE-KAQDRLKGGRRRPSRGSRAKPV-VSD 1587
Query: 1109 LPDWLIKEDEEIEQWAFEAKEEE 1131
D E+E+ E + EE+
Sbjct: 1588 -DD---SEEEQEEDRSGSGSEED 1606
Score = 49 (22.3 bits), Expect = 5.5e-34, Sum P(4) = 5.5e-34
Identities = 23/112 (20%), Positives = 50/112 (44%)
Query: 989 QDRAHRIGQKNEVRVL-RLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQ 1047
Q+R +R+ + R+ R+ + ++ + R K ++ K ++ F + + Q
Sbjct: 360 QEREYRL----QARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQR-----QLRQ 410
Query: 1048 FLQTILHQDDEEDEEENAVPDDETVNQML--ARSEEEFQTYQRIDAERRKEQ 1097
+ + +D + NA + Q L AR E+ + Q+I+ ER++ Q
Sbjct: 411 EVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQ 462
Score = 47 (21.6 bits), Expect = 8.8e-34, Sum P(4) = 8.8e-34
Identities = 20/82 (24%), Positives = 44/82 (53%)
Query: 1054 HQDDE-EDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIE--VSELP 1110
H + E E ++EN + E + +++A EE ++ + ID ++ K + + V+ L
Sbjct: 500 HANTEREQKKENERIEKERMRRLMAEDEEGYR--KLIDQKKDKRLAYLLQQTDEYVANLT 557
Query: 1111 DWLIKEDEEIEQWAFEAKEEEK 1132
+ L+++ + Q A E K+++K
Sbjct: 558 E-LVRQ-HKAAQVAKEKKKKKK 577
Score = 41 (19.5 bits), Expect = 1.1e-115, Sum P(5) = 1.1e-115
Identities = 13/64 (20%), Positives = 27/64 (42%)
Query: 1037 DQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKE 1096
D + +GSE + +++EE++ + A P V + + + +DA E
Sbjct: 648 DSEESGSEEEE-------EEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIE 700
Query: 1097 QGKK 1100
K+
Sbjct: 701 NAKQ 704
Score = 41 (19.5 bits), Expect = 9.3e-88, Sum P(5) = 9.3e-88
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 1283 ELQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+L D K + A +++++ S HE L+++ Q E E PD+
Sbjct: 1213 KLNVDQKVI--QAGMFDQKSSS-HERRAFLQAILEHEEQDEEEDEVPDD 1258
Score = 40 (19.1 bits), Expect = 1.3e-115, Sum P(5) = 1.3e-115
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 1063 ENA---VPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIK 1115
ENA V D+ V+Q LAR Q+Y + + K+S L+ L + IK
Sbjct: 700 ENAKQDVDDEYGVSQALARG---LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIK 752
Score = 38 (18.4 bits), Expect = 9.4e-293, Sum P(3) = 9.4e-293
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 62 DSMKEQGLEEDPRYQKLIEMKANR 85
+ M+ E++ Y+KLI+ K ++
Sbjct: 517 ERMRRLMAEDEEGYRKLIDQKKDK 540
>UNIPROTKB|E2RJ89 [details] [associations]
symbol:SMARCA4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6597 EMBL:AAEX03012414 RefSeq:XP_867683.1
Ensembl:ENSCAFT00000027907 GeneID:476710 KEGG:cfa:476710
OMA:HKPMESM Uniprot:E2RJ89
Length = 1614
Score = 2506 (887.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 477/634 (75%), Positives = 550/634 (86%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY++AH V E V +Q++++VNG LK+YQIKGLEW+VSL+NNNLNGILADEMGLGKTIQT
Sbjct: 730 SYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQT 789
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IALITYLME K++NGPFLIIVPLSTLSNW+ EF++WAPSV V+YKGSP R+ Q++
Sbjct: 790 IALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLR 849
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFNVLLTTYEY+IKDK LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP RLLL
Sbjct: 850 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 909
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGEKV+LNEEETILIIRRLH
Sbjct: 910 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLH 969
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVE+QLP+KVEY+IKCDMS LQ+VLYRHM KG+LLTDGSE
Sbjct: 970 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGK 1029
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSG-IVSGPDLYRVSGKFELLDRIL 891
LMNTI+QLRK+CNHP+MFQ+IEE FS+H+G +G IV G DLYR SGKFELLDRIL
Sbjct: 1030 GGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRIL 1089
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL++T H+VLLFCQMT LM I+EDYF+YRGFKY+RLDGTTKAEDRG LLK FN P SEY
Sbjct: 1090 PKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEY 1149
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIF+LSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 1150 FIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1209
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDET 1071
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +E+DEEE+ VPDDET
Sbjct: 1210 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEQDEEEDEVPDDET 1268
Query: 1072 VNQMLARSEEEFQTYQRIDAERRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEA 1127
VNQM+AR EEEF + R+D +RR+E+ + K RL+E ELP W+IK+D E+E+ E
Sbjct: 1269 VNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCE- 1327
Query: 1128 KEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+EEEK GRGSR RK+VDY+DSLTEK+WLKAI
Sbjct: 1328 EEEEKMF--GRGSRHRKEVDYSDSLTEKQWLKAI 1359
Score = 776 (278.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 164/310 (52%), Positives = 204/310 (65%)
Query: 184 KQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRA 243
KQS++T I KP GLDP+ ILQERE R+ I RI+EL +L +L LR KA IEL+A
Sbjct: 348 KQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELE-NLPGSLAGDLRTKATIELKA 406
Query: 244 LKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAER 303
L++LNFQRQLR EV+ C RRDT LETA+N KAYKR+KRQ L+EAR TEKLEKQQK+E ER
Sbjct: 407 LRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER 466
Query: 304 KKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXXXX 363
K+RQKHQEY+ ++LQH KDFKEYHR+ +I +L KAV YHAN
Sbjct: 467 KRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKER 526
Query: 364 XXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXXXXXXX 423
LMAEDEEGYRKLIDQKKDKRLA+LL QTDEY++NLT
Sbjct: 527 MRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKK- 585
Query: 424 XXSVKQKLMDTDGKVTL---DQ---DETSQLTDMHISVREISSGKVLKGEDAPLAAHLKQ 477
K+K + +G+ D DETSQ++D+ + V + SGK+L G DAP A L+
Sbjct: 586 ----KKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEA 641
Query: 478 WIQDHPGWEV 487
W++ +PG+EV
Sbjct: 642 WLEMNPGYEV 651
Score = 309 (113.8 bits), Expect = 0., Sum P(5) = 0.
Identities = 62/107 (57%), Positives = 82/107 (76%)
Query: 1225 IMRVVIKYTDSD-GRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDE 1283
I+ VIKY DS GR LSE FI+LPSRKELP+YYE+I +P+D KKI RI + KY S+++
Sbjct: 1432 IVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 1491
Query: 1284 LQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPD 1330
L+KD LC+NAQ +N E SLI+EDS+VL+SVFT RQ++E +D +
Sbjct: 1492 LEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSE 1538
Score = 126 (49.4 bits), Expect = 0., Sum P(5) = 0.
Identities = 29/54 (53%), Positives = 35/54 (64%)
Query: 92 FTSAQVQQLRFQIMAYRLLARNQPLTPQLAMGVQGKR-MEGVPSG-PQMPPMSL 143
F Q+ QLR QIMAY++LAR QPL L M VQGKR M G+ P +PP S+
Sbjct: 172 FNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSV 225
Score = 77 (32.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 11/29 (37%), Positives = 22/29 (75%)
Query: 50 PQENLTALQRAIDSMKEQGLEEDPRYQKL 78
PQ+N+ + + ++SM E+G+ +DPRY ++
Sbjct: 65 PQDNMHQMHKPMESMHEKGMSDDPRYNQM 93
Score = 59 (25.8 bits), Expect = 2.2e-34, Sum P(4) = 2.2e-34
Identities = 31/130 (23%), Positives = 61/130 (46%)
Query: 1028 EKVIQAGMFDQKSTGSERHQ-FLQTIL-HQDDEEDEEENAVPDDETVNQMLARSEEEFQT 1085
EK+ + +Q+ ++HQ +L +IL H D ++ + + + + +A T
Sbjct: 454 EKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVA-------T 506
Query: 1086 YQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQ 1145
Y A +EQ K++ IE + L+ EDEE + + K++++ ++ +Q
Sbjct: 507 YH---ANTEREQKKENERIEKERMRR-LMAEDEEGYRKLIDQKKDKRLAYL------LQQ 556
Query: 1146 VD-YTDSLTE 1154
D Y +LTE
Sbjct: 557 TDEYVANLTE 566
Score = 58 (25.5 bits), Expect = 3.1e-88, Sum P(4) = 3.1e-88
Identities = 27/143 (18%), Positives = 64/143 (44%)
Query: 998 KNEVRVLRLMTVNSVEERILA----AARYKLN----MDEKVIQAGMFDQKSTGSERHQFL 1049
K +R + ++N +E+ ++ A + L ++ ++ +F E+
Sbjct: 1478 KERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1537
Query: 1050 QTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRK-EQGKKSRLIEVSE 1108
+ +++EE EEE + + +V + +E + R+ RR+ +G +++ + VS+
Sbjct: 1538 EGEESEEEEEGEEEGSESESRSVKVKIKLGRKE-KAQDRLKGSRRRPSRGSRAKPV-VSD 1595
Query: 1109 LPDWLIKEDEEIEQWAFEAKEEE 1131
D E+E+ E + EE+
Sbjct: 1596 -DD---SEEEQEEDRSGSGSEED 1614
Score = 49 (22.3 bits), Expect = 2.3e-33, Sum P(4) = 2.3e-33
Identities = 23/112 (20%), Positives = 50/112 (44%)
Query: 989 QDRAHRIGQKNEVRVL-RLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQ 1047
Q+R +R+ + R+ R+ + ++ + R K ++ K ++ F + + Q
Sbjct: 368 QEREYRL----QARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQR-----QLRQ 418
Query: 1048 FLQTILHQDDEEDEEENAVPDDETVNQML--ARSEEEFQTYQRIDAERRKEQ 1097
+ + +D + NA + Q L AR E+ + Q+I+ ER++ Q
Sbjct: 419 EVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQ 470
Score = 47 (21.6 bits), Expect = 3.7e-33, Sum P(4) = 3.7e-33
Identities = 20/82 (24%), Positives = 44/82 (53%)
Query: 1054 HQDDE-EDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIE--VSELP 1110
H + E E ++EN + E + +++A EE ++ + ID ++ K + + V+ L
Sbjct: 508 HANTEREQKKENERIEKERMRRLMAEDEEGYR--KLIDQKKDKRLAYLLQQTDEYVANLT 565
Query: 1111 DWLIKEDEEIEQWAFEAKEEEK 1132
+ L+++ + Q A E K+++K
Sbjct: 566 E-LVRQ-HKAAQVAKEKKKKKK 585
Score = 43 (20.2 bits), Expect = 3.0e-115, Sum P(5) = 3.0e-115
Identities = 13/64 (20%), Positives = 28/64 (43%)
Query: 1037 DQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKE 1096
D + +GSE + +++EE++ + A P + V + + + +DA E
Sbjct: 656 DSEESGSEEEE-------EEEEEEQPQPAQPPNLPVEEKKKIPDPDSDDVSEVDARHIIE 708
Query: 1097 QGKK 1100
K+
Sbjct: 709 NAKQ 712
Score = 41 (19.5 bits), Expect = 2.6e-87, Sum P(5) = 2.6e-87
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 1283 ELQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+L D K + A +++++ S HE L+++ Q E E PD+
Sbjct: 1221 KLNVDQKVI--QAGMFDQKSSS-HERRAFLQAILEHEEQDEEEDEVPDD 1266
Score = 40 (19.1 bits), Expect = 6.1e-115, Sum P(5) = 6.1e-115
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 1063 ENA---VPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIK 1115
ENA V D+ V+Q LAR Q+Y + + K+S L+ L + IK
Sbjct: 708 ENAKQDVDDEYGVSQALARG---LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIK 760
Score = 38 (18.4 bits), Expect = 9.4e-293, Sum P(3) = 9.4e-293
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 62 DSMKEQGLEEDPRYQKLIEMKANR 85
+ M+ E++ Y+KLI+ K ++
Sbjct: 525 ERMRRLMAEDEEGYRKLIDQKKDK 548
>UNIPROTKB|F1M6Y4 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726
"perichromatin fibrils" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate
determination" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010424 "DNA methylation on cytosine
within a CG sequence" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
GO:GO:0035887 IPI:IPI00951882 Ensembl:ENSRNOT00000060927
ArrayExpress:F1M6Y4 Uniprot:F1M6Y4
Length = 1618
Score = 2499 (884.8 bits), Expect = 0., Sum P(5) = 0.
Identities = 475/634 (74%), Positives = 549/634 (86%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY++AH V E V +Q++++VNG LK+YQIKGLEW+VSL+NNNLNGILADEMGLGKTIQT
Sbjct: 730 SYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQT 789
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IALITYLME K++NGPFLIIVPLSTLSNW+ EF++WAPSV V+YKGSP R+ Q++
Sbjct: 790 IALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLR 849
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFNVLLTTYEY+IKDK LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP RLLL
Sbjct: 850 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 909
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGEKV+LNEEETILIIRRLH
Sbjct: 910 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLH 969
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVE+QLP+KVEY+IKCDMS LQ+VLYRHM KG+LLTDGSE
Sbjct: 970 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGK 1029
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSG-IVSGPDLYRVSGKFELLDRIL 891
LMNTI+QLRK+CNHP+MFQ+IEE FS+H+G +G IV G DLYR SGKFELLDRIL
Sbjct: 1030 GGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRIL 1089
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL++T H+VLLFCQMT LM I+EDYF+YRGFKY+RLDGTTKAEDRG LLK FN P SEY
Sbjct: 1090 PKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEY 1149
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIF+LSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 1150 FIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1209
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDET 1071
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +E+DEEE+ VPDDET
Sbjct: 1210 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEQDEEEDEVPDDET 1268
Query: 1072 VNQMLARSEEEFQTYQRIDAERRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEA 1127
VNQM+AR EEEF + R+D +RR+E+ + K RL+E ELP W+IK+D E+E+ E
Sbjct: 1269 VNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCE- 1327
Query: 1128 KEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+EEEK GRGSR RK+VDY+DSLTEK+WLK +
Sbjct: 1328 EEEEKMF--GRGSRHRKEVDYSDSLTEKQWLKQL 1359
Score = 771 (276.5 bits), Expect = 0., Sum P(5) = 0.
Identities = 162/310 (52%), Positives = 204/310 (65%)
Query: 184 KQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRA 243
KQS++T I KP GLDP+ ILQERE R+ I RI+EL +L +L LR KA IEL+A
Sbjct: 348 KQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELE-NLPGSLAGDLRTKATIELKA 406
Query: 244 LKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAER 303
L++LNFQRQLR EV+ C RRDT LETA+N KAYKR+KRQ L+EAR TEKLEKQQK+E ER
Sbjct: 407 LRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER 466
Query: 304 KKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXXXX 363
K+RQKHQEY+ ++LQH KDF+EYHR+ ++ +L KAV YHAN
Sbjct: 467 KRRQKHQEYLNSILQHAKDFREYHRSVTGKLQKLTKAVATYHANTEREQKKENERIEKER 526
Query: 364 XXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXXXXXXX 423
LMAEDEEGYRKLIDQKKDKRLA+LL QTDEY++NLT
Sbjct: 527 MRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKK- 585
Query: 424 XXSVKQKLMDTDGKVTL---DQ---DETSQLTDMHISVREISSGKVLKGEDAPLAAHLKQ 477
K+K + +G+ D DETSQ++D+ + V + SGK+L G DAP A L+
Sbjct: 586 ----KKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEA 641
Query: 478 WIQDHPGWEV 487
W++ +PG+EV
Sbjct: 642 WLEMNPGYEV 651
Score = 309 (113.8 bits), Expect = 0., Sum P(5) = 0.
Identities = 62/107 (57%), Positives = 82/107 (76%)
Query: 1225 IMRVVIKYTDSD-GRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDE 1283
I+ VIKY DS GR LSE FI+LPSRKELP+YYE+I +P+D KKI RI + KY S+++
Sbjct: 1436 IVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 1495
Query: 1284 LQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPD 1330
L+KD LC+NAQ +N E SLI+EDS+VL+SVFT RQ++E +D +
Sbjct: 1496 LEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSE 1542
Score = 126 (49.4 bits), Expect = 0., Sum P(5) = 0.
Identities = 29/54 (53%), Positives = 35/54 (64%)
Query: 92 FTSAQVQQLRFQIMAYRLLARNQPLTPQLAMGVQGKR-MEGVPSG-PQMPPMSL 143
F Q+ QLR QIMAY++LAR QPL L M VQGKR M G+ P +PP S+
Sbjct: 172 FNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSV 225
Score = 76 (31.8 bits), Expect = 0., Sum P(5) = 0.
Identities = 11/29 (37%), Positives = 22/29 (75%)
Query: 50 PQENLTALQRAIDSMKEQGLEEDPRYQKL 78
PQ+N+ + + ++SM E+G+ +DPRY ++
Sbjct: 65 PQDNMHQMHKPMESMHEKGMPDDPRYNQM 93
Score = 59 (25.8 bits), Expect = 2.8e-34, Sum P(4) = 2.8e-34
Identities = 32/129 (24%), Positives = 61/129 (47%)
Query: 1028 EKVIQAGMFDQKSTGSERHQ-FLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTY 1086
EK+ + +Q+ ++HQ +L +IL Q ++ E + +V L + + TY
Sbjct: 454 EKLEKQQKIEQERKRRQKHQEYLNSIL-QHAKDFREYH-----RSVTGKLQKLTKAVATY 507
Query: 1087 QRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQV 1146
A +EQ K++ IE + L+ EDEE + + K++++ ++ +Q
Sbjct: 508 H---ANTEREQKKENERIEKERMRR-LMAEDEEGYRKLIDQKKDKRLAYL------LQQT 557
Query: 1147 D-YTDSLTE 1154
D Y +LTE
Sbjct: 558 DEYVANLTE 566
Score = 53 (23.7 bits), Expect = 6.8e-87, Sum P(4) = 6.8e-87
Identities = 26/143 (18%), Positives = 64/143 (44%)
Query: 998 KNEVRVLRLMTVNSVEERILA----AARYKLN----MDEKVIQAGMFDQKSTGSERHQFL 1049
K +R + ++N +E+ ++ A + L ++ ++ +F E+
Sbjct: 1482 KERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1541
Query: 1050 QTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRK-EQGKKSRLIEVSE 1108
+ +++EE EEE + + +V + +E + R+ RR+ +G +++ + VS+
Sbjct: 1542 EGEESEEEEEGEEEGSESESRSVKVKIKLGRKE-KAQDRLKGGRRRPSRGSRAKPV-VSD 1599
Query: 1109 LPDWLIKEDEEIEQWAFEAKEEE 1131
D ++E+ E + EE+
Sbjct: 1600 -DD---SDEEQEEDRSGSGSEED 1618
Score = 49 (22.3 bits), Expect = 3.0e-33, Sum P(4) = 3.0e-33
Identities = 23/112 (20%), Positives = 50/112 (44%)
Query: 989 QDRAHRIGQKNEVRVL-RLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQ 1047
Q+R +R+ + R+ R+ + ++ + R K ++ K ++ F + + Q
Sbjct: 368 QEREYRL----QARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQR-----QLRQ 418
Query: 1048 FLQTILHQDDEEDEEENAVPDDETVNQML--ARSEEEFQTYQRIDAERRKEQ 1097
+ + +D + NA + Q L AR E+ + Q+I+ ER++ Q
Sbjct: 419 EVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQ 470
Score = 47 (21.6 bits), Expect = 4.8e-33, Sum P(4) = 4.8e-33
Identities = 20/82 (24%), Positives = 44/82 (53%)
Query: 1054 HQDDE-EDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIE--VSELP 1110
H + E E ++EN + E + +++A EE ++ + ID ++ K + + V+ L
Sbjct: 508 HANTEREQKKENERIEKERMRRLMAEDEEGYR--KLIDQKKDKRLAYLLQQTDEYVANLT 565
Query: 1111 DWLIKEDEEIEQWAFEAKEEEK 1132
+ L+++ + Q A E K+++K
Sbjct: 566 E-LVRQ-HKAAQVAKEKKKKKK 585
Score = 46 (21.3 bits), Expect = 0., Sum P(5) = 0.
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 1250 RKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDE 1283
RKE+ DY + + +K++ IE+G ++E
Sbjct: 1341 RKEV-DYSDSLTEKQWLKQLKAAIEEGTLEEIEE 1373
Score = 43 (20.2 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 1050 QTILHQDDE--EDEEENAVPDDETVNQM 1075
Q +HQ + E E +PDD NQM
Sbjct: 66 QDNMHQMHKPMESMHEKGMPDDPRYNQM 93
Score = 42 (19.8 bits), Expect = 1.6e-32, Sum P(4) = 1.6e-32
Identities = 22/130 (16%), Positives = 57/130 (43%)
Query: 191 IPKPEGLDPLIILQERENRV--ALNIERRIEELNGSLTST-------LPEHLRVKAEIEL 241
+P E ++ +I E E + ++++RR EE LP + +K + E+
Sbjct: 1263 VPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWI-IKDDAEV 1321
Query: 242 RALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA 301
L + ++ + R++ ++ K + + + ++E E++E++ + +
Sbjct: 1322 ERLTCEEEEEKMFGRG-SRHRKEVDYSDSLTEKQWLKQLKAAIEEG-TLEEIEEEVRQKK 1379
Query: 302 ERKKRQKHQE 311
+KR++ E
Sbjct: 1380 SSRKRKRDSE 1389
Score = 41 (19.5 bits), Expect = 3.5e-114, Sum P(5) = 3.5e-114
Identities = 13/64 (20%), Positives = 27/64 (42%)
Query: 1037 DQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKE 1096
D + +GSE + +++EE++ + A P V + + + +DA E
Sbjct: 656 DSEESGSEEEE-------EEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIE 708
Query: 1097 QGKK 1100
K+
Sbjct: 709 NAKQ 712
Score = 41 (19.5 bits), Expect = 3.0e-86, Sum P(5) = 3.0e-86
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 1283 ELQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+L D K + A +++++ S HE L+++ Q E E PD+
Sbjct: 1221 KLNVDQKVI--QAGMFDQKSSS-HERRAFLQAILEHEEQDEEEDEVPDD 1266
Score = 40 (19.1 bits), Expect = 4.4e-114, Sum P(5) = 4.4e-114
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 1063 ENA---VPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIK 1115
ENA V D+ V+Q LAR Q+Y + + K+S L+ L + IK
Sbjct: 708 ENAKQDVDDEYGVSQALARG---LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIK 760
Score = 38 (18.4 bits), Expect = 5.2e-292, Sum P(3) = 5.2e-292
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 62 DSMKEQGLEEDPRYQKLIEMKANR 85
+ M+ E++ Y+KLI+ K ++
Sbjct: 525 ERMRRLMAEDEEGYRKLIDQKKDK 548
>ZFIN|ZDB-GENE-030605-1 [details] [associations]
symbol:smarca4 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 4"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031101 "fin regeneration" evidence=IMP] [GO:0003407 "neural
retina development" evidence=IMP] [GO:0007417 "central nervous
system development" evidence=IMP] [GO:0014032 "neural crest cell
development" evidence=IMP] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=IMP] [GO:0010842 "retina
layer formation" evidence=IMP] [GO:0021634 "optic nerve formation"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0060973 "cell migration involved in heart development"
evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0060038
"cardiac muscle cell proliferation" evidence=IMP] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0000185
"activation of MAPKKK activity" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 ZFIN:ZDB-GENE-030605-1 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0030182 GO:GO:0003677 GO:GO:0007417
GO:GO:0004386 GO:GO:0001947 GO:GO:0010842 GO:GO:0014032
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0031101 GO:GO:0060038 GO:GO:0048596
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 GO:GO:0060059 GO:GO:0000185 HOGENOM:HOG000172363
HOVERGEN:HBG056636 CTD:6597 OMA:HKPMESM EMBL:BX322663 EMBL:BC163918
EMBL:BC163920 EMBL:AY205256 EMBL:AY218841 IPI:IPI00493397
RefSeq:NP_853634.1 UniGene:Dr.2414 SMR:Q7ZSY3 STRING:Q7ZSY3
Ensembl:ENSDART00000115110 Ensembl:ENSDART00000134514 GeneID:353295
KEGG:dre:353295 InParanoid:Q7ZSY3 NextBio:20812727 GO:GO:0060973
GO:GO:0021634 Uniprot:Q7ZSY3
Length = 1627
Score = 2483 (879.1 bits), Expect = 0., Sum P(5) = 0.
Identities = 473/634 (74%), Positives = 549/634 (86%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY++AH V E V +Q+S+LVNG+LK+YQIKGLEW+VSL+NNNLNGILADEMGLGKTIQT
Sbjct: 742 SYYAVAHAVTEKVEKQSSLLVNGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQT 801
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IALITYLME K++NGPFLIIVPLSTLSNW EF++WAPSV V+YKGSP R+ ++
Sbjct: 802 IALITYLMEFKRLNGPFLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAARRAFLPILR 861
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFNVL+TTYEY+IKDK LAKL WKYMI+DEGHRMKNHHCKLT +LNT Y+AP R+LL
Sbjct: 862 SGKFNVLVTTYEYIIKDKQVLAKLRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLL 921
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGEKV+LNEEETILIIRRLH
Sbjct: 922 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLH 981
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVE+QLP+KVEY+IKCDMS LQ+VLYRHM KG+LLTDGSE
Sbjct: 982 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGK 1041
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSG-IVSGPDLYRVSGKFELLDRIL 891
LMNTI+QLRK+CNHP+MFQ+IEE FS+H+G +G IV G DLYR SGKFELLDRIL
Sbjct: 1042 GGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGSDLYRASGKFELLDRIL 1101
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL++T H+VLLFCQMT LM I+EDYF+YR FKY+RLDGTTKAEDRG LLK FN P +Y
Sbjct: 1102 PKLRATNHKVLLFCQMTTLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLLKNFNDPSHQY 1161
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIF+LSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 1162 FIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1221
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDET 1071
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +E+DEEE+ VPDDET
Sbjct: 1222 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEQDEEEDEVPDDET 1280
Query: 1072 VNQMLARSEEEFQTYQRIDAERRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEA 1127
VNQM+ARSEEEF + R+D +RR+E+ + + RL+E ELP W++K+D E+E+ E
Sbjct: 1281 VNQMIARSEEEFDHFMRMDLDRRREEARNPKRRPRLMEEDELPTWIMKDDAEVERLTCE- 1339
Query: 1128 KEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+EEEK GRGSRQRK+VDY+DSLTEK+WLKAI
Sbjct: 1340 EEEEKMF--GRGSRQRKEVDYSDSLTEKQWLKAI 1371
Score = 771 (276.5 bits), Expect = 0., Sum P(5) = 0.
Identities = 161/308 (52%), Positives = 201/308 (65%)
Query: 184 KQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRA 243
KQ+++T I KP GLDP+ ILQERE R+ I RI+EL +L +L LR KA IEL+A
Sbjct: 366 KQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELE-NLPGSLAGDLRTKANIELKA 424
Query: 244 LKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAER 303
L++LNFQRQLR EV+ C RRDT LETA+N KAYKR+KRQ L+EAR TEKLEKQQK+E ER
Sbjct: 425 LRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER 484
Query: 304 KKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXXXX 363
K+RQKHQEY+ ++LQH KDFKEYHR+ A++ +L KAV YHAN
Sbjct: 485 KRRQKHQEYLNSILQHAKDFKEYHRSITAKMQKLTKAVATYHANTEREQKKENERIEKER 544
Query: 364 XXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXXXXXXX 423
LMAEDEEGYRKLIDQKKDKRLA+LL QTDEY++NLT
Sbjct: 545 MRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAAQALKDKKKKKKK 604
Query: 424 XXSVKQK----LMDTDGKVTLDQDETSQLTDMHISVREISSGKVLKGEDAPLAAHLKQWI 479
+ + DG+ DETSQ++D+ + V + SGK+L G DAP A L W+
Sbjct: 605 KKPENAEGGAPALGPDGEPL---DETSQMSDLPVKVIHVDSGKILTGMDAPKAGQLDTWL 661
Query: 480 QDHPGWEV 487
+ +PG+EV
Sbjct: 662 EMNPGYEV 669
Score = 310 (114.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 60/103 (58%), Positives = 79/103 (76%)
Query: 1229 VIKYTDSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDELQKDF 1288
VIKY D +GR LSE FI+LPSRKELP+YYE+I +P+D +KI RI KY S+++L+KD
Sbjct: 1451 VIKYKDGNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHKYRSLNDLEKDV 1510
Query: 1289 KTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
LC+NAQ +N E SLI+EDS+VL+SVFT RQ++E E+ E
Sbjct: 1511 MLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEEEESE 1553
Score = 140 (54.3 bits), Expect = 0., Sum P(5) = 0.
Identities = 32/56 (57%), Positives = 36/56 (64%)
Query: 92 FTSAQVQQLRFQIMAYRLLARNQPLTPQLAMGVQGKR-MEGVPSG-PQMPPMSLHG 145
F Q+ QLR QIMAY++LAR QPL L M VQGKR M G+ G P MPP S G
Sbjct: 198 FNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQGMPNMPPASGQG 253
Score = 65 (27.9 bits), Expect = 0., Sum P(5) = 0.
Identities = 10/29 (34%), Positives = 20/29 (68%)
Query: 50 PQENLTALQRAIDSMKEQGLEEDPRYQKL 78
PQ+N+ + + ++ M E+G+ ED RY ++
Sbjct: 65 PQDNMHQMHKPMEGMHEKGIPEDQRYGQM 93
Score = 64 (27.6 bits), Expect = 2.5e-88, Sum P(4) = 2.5e-88
Identities = 26/147 (17%), Positives = 65/147 (44%)
Query: 998 KNEVRVLRLMTVNSVEERILAAAR--YKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQ 1055
K +R + ++N +E+ ++ + N++ +I +S + Q ++ +
Sbjct: 1492 KERIRSHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIE----K 1547
Query: 1056 DDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIK 1115
++EE E +++ +++ V++ + ++ + + E+GK R S P ++
Sbjct: 1548 EEEESEGDDSEEEEDDVDEGSESESRSVKVKIKLSRKDKAERGKGRRRTGRSSRPKPVVS 1607
Query: 1116 EDEEIEQWAFEAKEEEKALHMGRGSRQ 1142
+D+ E +EEE H GS +
Sbjct: 1608 DDDSEED-----QEEE---HSASGSEE 1626
Score = 59 (25.8 bits), Expect = 1.1e-34, Sum P(4) = 1.1e-34
Identities = 36/178 (20%), Positives = 81/178 (45%)
Query: 989 QDRAHRIGQKNEVRVL-RLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQ 1047
Q+R +R+ + R+ R+ + ++ + R K N++ K ++ F + + Q
Sbjct: 386 QEREYRL----QARIAHRIQELENLPGSLAGDLRTKANIELKALRLLNFQR-----QLRQ 436
Query: 1048 FLQTILHQDDEEDEEENAVPDDETVNQML--ARSEEEFQTYQRIDAERRKEQGKKSRLIE 1105
+ + +D + NA + Q L AR E+ + Q+I+ ER++ Q + L
Sbjct: 437 EVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNS 496
Query: 1106 VSELPDWLIKEDEEIEQWAFEAKEEE--KALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+ + K+ +E + + AK ++ KA+ + +R+Q + + EKE ++ +
Sbjct: 497 ILQHA----KDFKEYHR-SITAKMQKLTKAVATYHANTEREQKKENERI-EKERMRRL 548
Score = 52 (23.4 bits), Expect = 1.0e-115, Sum P(5) = 1.0e-115
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 1056 DDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKK 1100
D+EED+EE P + + + + +DA E K+
Sbjct: 681 DEEEDDEEEPQPSQAPTEEKKVIPDPDSEDVSEVDARHIIEHAKQ 725
Score = 49 (22.3 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 201 IILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKV-LNFQRQLRAE 256
I+LQ V IE+ EE G + + + +E E R++KV + R+ +AE
Sbjct: 1532 IVLQSVFTSVRQKIEKEEEESEGDDSEEEEDDVDEGSESESRSVKVKIKLSRKDKAE 1588
Score = 45 (20.9 bits), Expect = 0., Sum P(5) = 0.
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 115 PLTPQLAMGVQGKRMEGVPSGPQMPPMSLH 144
P P A V + + P P PPM LH
Sbjct: 336 PSVPPAASPVMPPQTQS-PGQPAQPPMVLH 364
Score = 44 (20.5 bits), Expect = 1.7e-32, Sum P(5) = 1.7e-32
Identities = 12/43 (27%), Positives = 25/43 (58%)
Query: 1054 HQDDE-EDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRK 1095
H + E E ++EN + E + +++A EE ++ + ID ++ K
Sbjct: 526 HANTEREQKKENERIEKERMRRLMAEDEEGYR--KLIDQKKDK 566
Score = 41 (19.5 bits), Expect = 1.1e-87, Sum P(5) = 1.1e-87
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 1283 ELQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+L D K + A +++++ S HE L+++ Q E E PD+
Sbjct: 1233 KLNVDQKVI--QAGMFDQKSSS-HERRAFLQAILEHEEQDEEEDEVPDD 1278
Score = 40 (19.1 bits), Expect = 0., Sum P(5) = 0.
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 131 GVPSGPQMP 139
G PSGP MP
Sbjct: 138 GPPSGPMMP 146
Score = 39 (18.8 bits), Expect = 1.6e-290, Sum P(3) = 1.6e-290
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 52 ENLTALQRAIDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQ 96
E+ ++ ID K++ L Q+ E AN TE+ A +AQ
Sbjct: 551 EDEEGYRKLIDQKKDKRLAY--LLQQTDEYVANLTELVRAHKAAQ 593
Score = 38 (18.4 bits), Expect = 0., Sum P(5) = 0.
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 1115 KEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKE 1156
KE+EE E +++EEE + G S R V L+ K+
Sbjct: 1547 KEEEESE--GDDSEEEEDDVDEGSESESRS-VKVKIKLSRKD 1585
Score = 38 (18.4 bits), Expect = 2.0e-290, Sum P(3) = 2.0e-290
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 62 DSMKEQGLEEDPRYQKLIEMKANR 85
+ M+ E++ Y+KLI+ K ++
Sbjct: 543 ERMRRLMAEDEEGYRKLIDQKKDK 566
Score = 38 (18.4 bits), Expect = 3.0e-114, Sum P(5) = 3.0e-114
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 1115 KEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVD 1147
+ED+E E +A EEK + S +VD
Sbjct: 683 EEDDEEEPQPSQAPTEEKKVIPDPDSEDVSEVD 715
Score = 37 (18.1 bits), Expect = 4.4e-20, Sum P(3) = 4.4e-20
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 1050 QTILHQDDE--EDEEENAVPDDETVNQM 1075
Q +HQ + E E +P+D+ QM
Sbjct: 66 QDNMHQMHKPMEGMHEKGIPEDQRYGQM 93
>UNIPROTKB|F1MJ46 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 GO:GO:0035887
IPI:IPI00693529 OMA:HKPMESM EMBL:DAAA02019479 EMBL:DAAA02019480
EMBL:DAAA02019481 Ensembl:ENSBTAT00000025598 ArrayExpress:F1MJ46
Uniprot:F1MJ46
Length = 1604
Score = 2477 (877.0 bits), Expect = 0., Sum P(5) = 0.
Identities = 475/634 (74%), Positives = 548/634 (86%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY++AH V E V +Q++++VNG LK+YQIKGLEW+VSL+NNNLNGILADEMGLGKTIQT
Sbjct: 722 SYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQT 781
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IALITYLME K++NGPFLIIVPLSTLSNW+ EF++WAPSV V+YKGSP R+ Q++
Sbjct: 782 IALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLR 841
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFNVLLTTYEY+IKDK LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP RLLL
Sbjct: 842 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 901
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGEKV+LNEEETILIIRRLH
Sbjct: 902 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLH 961
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVE+QLP+KVEY+IKCDMS LQ+VLYRHM KG+LLTDGSE
Sbjct: 962 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGK 1021
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSG-IVSGPDLYRVSGKFELLDRIL 891
LMNTI+QLRK+CNHP+MFQ+IEE FS+H+G +G IV G DLYR SGKFELLDRIL
Sbjct: 1022 GGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRIL 1081
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL++T H+VLLFCQMT LM I+EDYF+YRGFKY+RLDGTTKAEDRG LL FN P SEY
Sbjct: 1082 PKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLT-FNEPGSEY 1140
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FI +LSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 1141 FI-LLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1199
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDET 1071
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +E+DEEE+ VPDDET
Sbjct: 1200 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEQDEEEDEVPDDET 1258
Query: 1072 VNQMLARSEEEFQTYQRIDAERRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEA 1127
VNQM+AR EEEF + R+D +RR+E+ + K RL+E ELP W+IK+D E+E+ E
Sbjct: 1259 VNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCE- 1317
Query: 1128 KEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+EEEK GRGSR RK+VDY+DSLTEK+WLKAI
Sbjct: 1318 EEEEKMF--GRGSRHRKEVDYSDSLTEKQWLKAI 1349
Score = 776 (278.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 164/310 (52%), Positives = 204/310 (65%)
Query: 184 KQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRA 243
KQS++T I KP GLDP+ ILQERE R+ I RI+EL +L +L LR KA IEL+A
Sbjct: 340 KQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELE-NLPGSLAGDLRTKATIELKA 398
Query: 244 LKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAER 303
L++LNFQRQLR EV+ C RRDT LETA+N KAYKR+KRQ L+EAR TEKLEKQQK+E ER
Sbjct: 399 LRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER 458
Query: 304 KKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXXXX 363
K+RQKHQEY+ ++LQH KDFKEYHR+ +I +L KAV YHAN
Sbjct: 459 KRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKER 518
Query: 364 XXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXXXXXXX 423
LMAEDEEGYRKLIDQKKDKRLA+LL QTDEY++NLT
Sbjct: 519 MRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKK- 577
Query: 424 XXSVKQKLMDTDGKVTL---DQ---DETSQLTDMHISVREISSGKVLKGEDAPLAAHLKQ 477
K+K + +G+ D DETSQ++D+ + V + SGK+L G DAP A L+
Sbjct: 578 ----KKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEA 633
Query: 478 WIQDHPGWEV 487
W++ +PG+EV
Sbjct: 634 WLEMNPGYEV 643
Score = 309 (113.8 bits), Expect = 0., Sum P(5) = 0.
Identities = 62/107 (57%), Positives = 82/107 (76%)
Query: 1225 IMRVVIKYTDSD-GRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDE 1283
I+ VIKY DS GR LSE FI+LPSRKELP+YYE+I +P+D KKI RI + KY S+++
Sbjct: 1422 IVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 1481
Query: 1284 LQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPD 1330
L+KD LC+NAQ +N E SLI+EDS+VL+SVFT RQ++E +D +
Sbjct: 1482 LEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSE 1528
Score = 133 (51.9 bits), Expect = 0., Sum P(5) = 0.
Identities = 30/54 (55%), Positives = 36/54 (66%)
Query: 92 FTSAQVQQLRFQIMAYRLLARNQPLTPQLAMGVQGKR-MEGV-PSGPQMPPMSL 143
F Q+ QLR QIMAY++LAR QPL L M VQGKR M G+ P P +PP S+
Sbjct: 172 FNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQPQMPALPPPSV 225
Score = 76 (31.8 bits), Expect = 0., Sum P(5) = 0.
Identities = 11/29 (37%), Positives = 22/29 (75%)
Query: 50 PQENLTALQRAIDSMKEQGLEEDPRYQKL 78
PQ+N+ + + ++SM E+G+ +DPRY ++
Sbjct: 65 PQDNMHQMHKPMESMHEKGMSDDPRYTQM 93
Score = 59 (25.8 bits), Expect = 5.1e-35, Sum P(4) = 5.1e-35
Identities = 31/130 (23%), Positives = 61/130 (46%)
Query: 1028 EKVIQAGMFDQKSTGSERHQ-FLQTIL-HQDDEEDEEENAVPDDETVNQMLARSEEEFQT 1085
EK+ + +Q+ ++HQ +L +IL H D ++ + + + + +A T
Sbjct: 446 EKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVA-------T 498
Query: 1086 YQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQ 1145
Y A +EQ K++ IE + L+ EDEE + + K++++ ++ +Q
Sbjct: 499 YH---ANTEREQKKENERIEKERMRR-LMAEDEEGYRKLIDQKKDKRLAYL------LQQ 548
Query: 1146 VD-YTDSLTE 1154
D Y +LTE
Sbjct: 549 TDEYVANLTE 558
Score = 56 (24.8 bits), Expect = 1.1e-88, Sum P(4) = 1.1e-88
Identities = 27/143 (18%), Positives = 64/143 (44%)
Query: 998 KNEVRVLRLMTVNSVEERILA----AARYKLN----MDEKVIQAGMFDQKSTGSERHQFL 1049
K +R + ++N +E+ ++ A + L ++ ++ +F E+
Sbjct: 1468 KERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1527
Query: 1050 QTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRK-EQGKKSRLIEVSE 1108
+ +++EE EEE + + +V + +E + R+ RR+ +G +++ + VS+
Sbjct: 1528 EGEESEEEEEGEEEGSESESRSVKVKIKLGRKE-KAQDRLKGGRRRPSRGSRAKPV-VSD 1585
Query: 1109 LPDWLIKEDEEIEQWAFEAKEEE 1131
D E+E+ E + EE+
Sbjct: 1586 -DD---SEEEQEEDRSGSGSEED 1604
Score = 49 (22.3 bits), Expect = 5.4e-34, Sum P(4) = 5.4e-34
Identities = 23/112 (20%), Positives = 50/112 (44%)
Query: 989 QDRAHRIGQKNEVRVL-RLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQ 1047
Q+R +R+ + R+ R+ + ++ + R K ++ K ++ F + + Q
Sbjct: 360 QEREYRL----QARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQR-----QLRQ 410
Query: 1048 FLQTILHQDDEEDEEENAVPDDETVNQML--ARSEEEFQTYQRIDAERRKEQ 1097
+ + +D + NA + Q L AR E+ + Q+I+ ER++ Q
Sbjct: 411 EVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQ 462
Score = 47 (21.6 bits), Expect = 8.7e-34, Sum P(4) = 8.7e-34
Identities = 20/82 (24%), Positives = 44/82 (53%)
Query: 1054 HQDDE-EDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIE--VSELP 1110
H + E E ++EN + E + +++A EE ++ + ID ++ K + + V+ L
Sbjct: 500 HANTEREQKKENERIEKERMRRLMAEDEEGYR--KLIDQKKDKRLAYLLQQTDEYVANLT 557
Query: 1111 DWLIKEDEEIEQWAFEAKEEEK 1132
+ L+++ + Q A E K+++K
Sbjct: 558 E-LVRQ-HKAAQVAKEKKKKKK 577
Score = 41 (19.5 bits), Expect = 1.0e-115, Sum P(5) = 1.0e-115
Identities = 13/64 (20%), Positives = 27/64 (42%)
Query: 1037 DQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKE 1096
D + +GSE + +++EE++ + A P V + + + +DA E
Sbjct: 648 DSEESGSEEEE-------EEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIE 700
Query: 1097 QGKK 1100
K+
Sbjct: 701 NAKQ 704
Score = 41 (19.5 bits), Expect = 9.1e-88, Sum P(5) = 9.1e-88
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 1283 ELQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+L D K + A +++++ S HE L+++ Q E E PD+
Sbjct: 1211 KLNVDQKVI--QAGMFDQKSSS-HERRAFLQAILEHEEQDEEEDEVPDD 1256
Score = 40 (19.1 bits), Expect = 1.3e-115, Sum P(5) = 1.3e-115
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 1063 ENA---VPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIK 1115
ENA V D+ V+Q LAR Q+Y + + K+S L+ L + IK
Sbjct: 700 ENAKQDVDDEYGVSQALARG---LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIK 752
Score = 38 (18.4 bits), Expect = 1.1e-289, Sum P(3) = 1.1e-289
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 62 DSMKEQGLEEDPRYQKLIEMKANR 85
+ M+ E++ Y+KLI+ K ++
Sbjct: 517 ERMRRLMAEDEEGYRKLIDQKKDK 540
>UNIPROTKB|E1C2F7 [details] [associations]
symbol:E1C2F7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0045944
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ EMBL:AADN02068434 EMBL:AADN02068435 EMBL:AADN02068436
EMBL:AADN02068437 EMBL:AADN02068438 EMBL:AADN02068439
EMBL:AADN02068440 EMBL:AADN02068441 IPI:IPI00583413
Ensembl:ENSGALT00000016528 Uniprot:E1C2F7
Length = 1546
Score = 2469 (874.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 464/634 (73%), Positives = 549/634 (86%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY++AH + E V +Q+S+L+NG LK YQ++GLEWMVSL+NNNLNGILADEMGLGKTIQT
Sbjct: 674 SYYTVAHAITERVEKQSSLLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQT 733
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IALITYLME K++NGP+LIIVPLSTLSNW+ EF++WAPSV ++YKG+P +R++L Q++
Sbjct: 734 IALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLR 793
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFNVLLTTYEY+IKDK LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP R+LL
Sbjct: 794 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 853
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGE+V+LNEEETILIIRRLH
Sbjct: 854 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLH 913
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVESQLP+KVEY+IKCDMS LQK+LYRHM KGILLTDGSE
Sbjct: 914 KVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGK 973
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGS-GIVSGPDLYRVSGKFELLDRIL 891
LMNTI+QLRK+CNHP+MFQ+IEE F++H+G S G+++G +LYR SGKFELLDRIL
Sbjct: 974 GGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRIL 1033
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL++T HRVLLFCQMT LM I+EDYF++R F Y+RLDGTTK+EDR LLKKFN P S+Y
Sbjct: 1034 PKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQY 1093
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIF+LSTRAGGLGLNLQ ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 1094 FIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1153
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDET 1071
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +EE+EEE+ VPDDET
Sbjct: 1154 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEENEEEDEVPDDET 1212
Query: 1072 VNQMLARSEEEFQTYQRIDAERRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEA 1127
+NQM+AR EEEF + R+D +RR+E + K RL+E ELP W+IK+D E+E+ E
Sbjct: 1213 LNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCE- 1271
Query: 1128 KEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+EEEK GRGSRQR+ VDY+D+LTEK+WL+AI
Sbjct: 1272 EEEEKIF--GRGSRQRRDVDYSDALTEKQWLRAI 1303
Score = 413 (150.4 bits), Expect = 0., Sum P(5) = 0.
Identities = 100/265 (37%), Positives = 142/265 (53%)
Query: 233 LRVKAEIELRALKVLNFQRQLRAEVIACARRDTTLET-AVNVKAYKRTKRQGLKEA-RAT 290
+R++A I R ++ N L ++ R T+E A+ + ++R RQ + R
Sbjct: 342 IRLQARIAHRIQELENLPGSLPPDL----RTKATVELKALRLLNFQRQLRQEVVACMRRD 397
Query: 291 EKLE-----KQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYH 345
LE K K+E ERK+RQKHQEY+ ++LQH KDFKEYHR+ +I +L+KAV +H
Sbjct: 398 TTLETALNSKAYKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWH 457
Query: 346 ANAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXX 405
AN LMAEDEEGYRKLIDQKKD+RLA+LL QTDEY++NLT
Sbjct: 458 ANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLV 517
Query: 406 XXXXXXXXXXXXXXXXXXXXSVKQKLMDTDGKVTLDQ---DETSQLTDMHISVREISSGK 462
++ + D DE+SQ++D+ + V +GK
Sbjct: 518 WEHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGK 577
Query: 463 VLKGEDAPLAAHLKQWIQDHPGWEV 487
VL G +AP A+ L W++ +PG+EV
Sbjct: 578 VLLGPEAPKASQLDAWLEMNPGYEV 602
Score = 297 (109.6 bits), Expect = 0., Sum P(5) = 0.
Identities = 59/107 (55%), Positives = 78/107 (72%)
Query: 1225 IMRVVIKYTDSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDEL 1284
I+ VI Y DS GR LSE FI+LPSRKELP+YYE+I +P+D KKI RI + KY S+ +L
Sbjct: 1364 IIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDL 1423
Query: 1285 QKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+KD LC NAQ +N E S I+EDS+VL+SVF ARQ++ E+ ++
Sbjct: 1424 EKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESED 1470
Score = 226 (84.6 bits), Expect = 0., Sum P(5) = 0.
Identities = 53/101 (52%), Positives = 68/101 (67%)
Query: 190 NIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNF 249
N K GL+P+ +R R+ I RI+EL +L +LP LR KA +EL+AL++LNF
Sbjct: 324 NFKKGLGLNPVFGNSKRIIRLQARIAHRIQELE-NLPGSLPPDLRTKATVELKALRLLNF 382
Query: 250 QRQLRAEVIACARRDTTLETAVNVKAYK----RTKRQGLKE 286
QRQLR EV+AC RRDTTLETA+N KAYK R +RQ +E
Sbjct: 383 QRQLRQEVVACMRRDTTLETALNSKAYKIEQERKRRQKHQE 423
Score = 116 (45.9 bits), Expect = 0., Sum P(5) = 0.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 92 FTSAQVQQLRFQIMAYRLLARNQPLTPQLAMGVQGKR-MEGVPSGPQMPPMSLH 144
F+ Q+ QLR QI+AY++LAR QPL L + VQGKR + G+ Q PP + +
Sbjct: 172 FSPVQLHQLRAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQ--QQPPSAFN 223
Score = 68 (29.0 bits), Expect = 7.8e-31, Sum P(4) = 7.8e-31
Identities = 35/163 (21%), Positives = 75/163 (46%)
Query: 1000 EVRVLRLMTVN-SVEERILAAARYKLNMDEKV-IQAGMFDQKSTGSERHQ-FLQTIL-HQ 1055
E++ LRL+ + + ++A R ++ + +A +Q+ ++HQ +L +IL H
Sbjct: 373 ELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKIEQERKRRQKHQEYLNSILQHA 432
Query: 1056 DDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIK 1115
D ++ + + +++ +A T+ A +EQ K++ IE + L+
Sbjct: 433 KDFKEYHRSVAGKIQKLSKAVA-------TWH---ANTEREQKKETERIEKERMRR-LMA 481
Query: 1116 EDEEIEQWAFEAKEEEKALHMGRGSRQRKQVD-YTDSLTEKEW 1157
EDEE + + K++ + ++ +Q D Y +LT W
Sbjct: 482 EDEEGYRKLIDQKKDRRLAYL------LQQTDEYVANLTNLVW 518
Score = 55 (24.4 bits), Expect = 0., Sum P(5) = 0.
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 50 PQENLTALQRAIDSMKEQGLEED 72
PQE + + ++ID + E+G+ ED
Sbjct: 66 PQEGMHQMHKSIDGLHEKGMVED 88
Score = 53 (23.7 bits), Expect = 6.7e-42, Sum P(4) = 6.7e-42
Identities = 8/51 (15%), Positives = 31/51 (60%)
Query: 1054 HQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLI 1104
+ D++ED+EE + + ++V + ++++ ++ ++ ++R+ + K ++
Sbjct: 1473 NDDEDEDDEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQSRAKAKPVV 1523
Score = 43 (20.2 bits), Expect = 1.6e-303, Sum P(5) = 1.6e-303
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 195 EGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLR 254
EG LI Q+++ R+A +++ +E +LT+ + EH + +A E + + + +
Sbjct: 485 EGYRKLID-QKKDRRLAYLLQQT-DEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEEN 542
Query: 255 AEVIA 259
AE +A
Sbjct: 543 AEGMA 547
Score = 43 (20.2 bits), Expect = 7.2e-41, Sum P(4) = 7.2e-41
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 1021 RYKLNM-DEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEEN 1064
+ KLN DEK + G ++ + R + + D +ED++EN
Sbjct: 1494 KIKLNKKDEKSREKGKGKKRQS---RAKAKPVVSDDDSDEDQDEN 1535
Score = 41 (19.5 bits), Expect = 6.8e-288, Sum P(3) = 6.8e-288
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 62 DSMKEQGLEEDPRYQKLIEMKANR 85
+ M+ E++ Y+KLI+ K +R
Sbjct: 474 ERMRRLMAEDEEGYRKLIDQKKDR 497
Score = 41 (19.5 bits), Expect = 4.6e-28, Sum P(4) = 4.6e-28
Identities = 26/128 (20%), Positives = 55/128 (42%)
Query: 191 IPKPEGLDPLIILQERENRV--ALNIERRIEELNGSLTST-------LPEHLRVKAEIEL 241
+P E L+ +I +E E + ++++RR E+ LP + +K + E+
Sbjct: 1207 VPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWI-IKDDAEV 1265
Query: 242 RALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA 301
L + ++ + RRD A+ K + R G E E +++V
Sbjct: 1266 ERLTCEEEEEKIFGRG-SRQRRDVDYSDALTEKQWLRAIEDGNLE-------EMEEEVRL 1317
Query: 302 ERKKRQKH 309
+++KR+++
Sbjct: 1318 KKRKRRRN 1325
Score = 40 (19.1 bits), Expect = 4.3e-40, Sum P(5) = 4.3e-40
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 1283 ELQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+L D K + A +++++ S HE L+++ + E E PD+
Sbjct: 1165 KLNVDQKVI--QAGMFDQKSSS-HERRAFLQAILEHEEENEEEDEVPDD 1210
Score = 39 (18.8 bits), Expect = 1.5e-66, Sum P(5) = 1.5e-66
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 1068 DDETVNQMLARSEEEFQTYQRIDAERRKEQ 1097
DDE Q AR + + T ER ++Q
Sbjct: 660 DDEYSMQYSARGSQSYYTVAHAITERVEKQ 689
Score = 38 (18.4 bits), Expect = 1.9e-66, Sum P(5) = 1.9e-66
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 1056 DDEEDEEENA-VPDDETVNQMLARSEEE 1082
++E+DEEE++ + DE + +L + EE
Sbjct: 617 EEEDDEEESSRLEADEKI--LLDPNSEE 642
>MGI|MGI:99603 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006325 "chromatin organization"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=ISO;TAS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
"WINAC complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 MGI:MGI:99603 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0007399 GO:GO:0030308
GO:GO:0045944 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386
GO:GO:0001105 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778 KO:K11647
ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
EMBL:BC075641 IPI:IPI01018407 RefSeq:NP_035546.2 UniGene:Mm.313303
ProteinModelPortal:Q6DIC0 SMR:Q6DIC0 DIP:DIP-48888N STRING:Q6DIC0
PhosphoSite:Q6DIC0 PaxDb:Q6DIC0 PRIDE:Q6DIC0 GeneID:67155
KEGG:mmu:67155 UCSC:uc008hbn.1 InParanoid:Q6DIC0 OrthoDB:EOG418BMJ
NextBio:323746 Bgee:Q6DIC0 Genevestigator:Q6DIC0 Uniprot:Q6DIC0
Length = 1577
Score = 2466 (873.1 bits), Expect = 0., Sum P(5) = 0.
Identities = 462/634 (72%), Positives = 549/634 (86%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY++AH + E V +Q+++L+NG LK YQ++GLEWMVSL+NNNLNGILADEMGLGKTIQT
Sbjct: 705 SYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQT 764
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IALITYLME K++NGP+LIIVPLSTLSNW+ EF++WAPSV ++YKG+P +R++L Q++
Sbjct: 765 IALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLR 824
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFNVLLTTYEY+IKDK LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP R+LL
Sbjct: 825 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 884
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGE+V+LNEEETILIIRRLH
Sbjct: 885 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLH 944
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVESQLP+KVEY+IKCDMS LQK+LYRHM KGILLTDGSE
Sbjct: 945 KVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGK 1004
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGS-GIVSGPDLYRVSGKFELLDRIL 891
LMNTI+QLRK+CNHP+MFQ+IEE F++H+G S G+++G +LYR SGKFELLDRIL
Sbjct: 1005 GGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRIL 1064
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL++T HRVLLFCQMT LM I+EDYF++R F Y+RLDGTTK+EDR LLKKFN P S+Y
Sbjct: 1065 PKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQY 1124
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIF+LSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 1125 FIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1184
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDET 1071
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +EE+EEE+ VPDDET
Sbjct: 1185 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEENEEEDEVPDDET 1243
Query: 1072 VNQMLARSEEEFQTYQRIDAERRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEA 1127
+NQM+AR EEEF + R+D +RR+E + K RL+E ELP W+IK+D E+E+ E
Sbjct: 1244 LNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCE- 1302
Query: 1128 KEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+EEEK GRGSRQR+ VDY+D+LTEK+WL+AI
Sbjct: 1303 EEEEKIF--GRGSRQRRDVDYSDALTEKQWLRAI 1334
Score = 773 (277.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 160/309 (51%), Positives = 206/309 (66%)
Query: 182 QIKQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIEL 241
Q KQS+++ I KP+GLDP+ ILQERE R+ I RI+EL SL +LP LR KA +EL
Sbjct: 327 QQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELE-SLPGSLPPDLRTKATVEL 385
Query: 242 RALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA 301
+AL++LNFQRQLR EV+AC RRDTTLETA+N KAYKR+KRQ L+EAR TEKLEKQQK+E
Sbjct: 386 KALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQ 445
Query: 302 ERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXX 361
ERK+RQKHQEY+ ++LQH KDFKEYHR+ +I +L+KAV +HAN
Sbjct: 446 ERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEK 505
Query: 362 XXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXXXXX 421
LMAEDEEGYRKLIDQKKD+RLA+LL QTDEY++NLT
Sbjct: 506 ERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRR 565
Query: 422 XXXXSVKQKLMDTDGKVTLDQ---DETSQLTDMHISVREISSGKVLKGEDAPLAAHLKQW 478
++ + + D DE+SQ++D+ + V +GKVL G +AP A+ L W
Sbjct: 566 RRKKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAW 625
Query: 479 IQDHPGWEV 487
++ +PG+EV
Sbjct: 626 LEMNPGYEV 634
Score = 297 (109.6 bits), Expect = 0., Sum P(5) = 0.
Identities = 59/107 (55%), Positives = 78/107 (72%)
Query: 1225 IMRVVIKYTDSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDEL 1284
I+ VI Y DS GR LSE FI+LPSRK+LP+YYE+I +P+D KKI RI + KY S+ +L
Sbjct: 1395 IIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDL 1454
Query: 1285 QKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+KD LC NAQ +N E S I+EDS+VL+SVF ARQ++ E+ +E
Sbjct: 1455 EKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEE 1501
Score = 106 (42.4 bits), Expect = 0., Sum P(5) = 0.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 92 FTSAQVQQLRFQIMAYRLLARNQPLTPQLAMGVQGKR 128
F+ Q+ QLR QI+AY++LAR QPL L + VQGKR
Sbjct: 168 FSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKR 204
Score = 60 (26.2 bits), Expect = 1.3e-27, Sum P(5) = 1.3e-27
Identities = 31/135 (22%), Positives = 62/135 (45%)
Query: 1026 MDEKVIQAGMFDQKSTGSERHQ-FLQTIL-HQDDEEDEEENAVPDDETVNQMLARSEEEF 1083
M EK+ + +Q+ ++HQ +L +IL H D ++ + + +++ +A
Sbjct: 433 MTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVA------ 486
Query: 1084 QTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQR 1143
T+ A +EQ K++ IE + L+ EDEE + + K++ + ++
Sbjct: 487 -TWH---ANTEREQKKETERIEKERMRR-LMAEDEEGYRKLIDQKKDRRLAYL------L 535
Query: 1144 KQVD-YTDSLTEKEW 1157
+Q D Y +LT W
Sbjct: 536 QQTDEYVANLTNLVW 550
Score = 58 (25.5 bits), Expect = 1.0e-295, Sum P(5) = 1.0e-295
Identities = 17/62 (27%), Positives = 36/62 (58%)
Query: 252 QLRAEVIA---CARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQK 308
QLRA+++A AR ET KRT G+++ + ++ ++QQ+ + +++++Q+
Sbjct: 175 QLRAQILAYKMLARGQPLPETLQLAVQGKRTL-PGMQQQQQQQQQQQQQQQQQQQQQQQQ 233
Query: 309 HQ 310
Q
Sbjct: 234 QQ 235
Score = 55 (24.4 bits), Expect = 1.8e-82, Sum P(4) = 1.8e-82
Identities = 17/69 (24%), Positives = 37/69 (53%)
Query: 1054 HQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWL 1113
++++EED+EE + + ++V + +++E + ++R +GK + VS+
Sbjct: 1504 NEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPV--VSDFDS-- 1559
Query: 1114 IKEDEEIEQ 1122
+E EE EQ
Sbjct: 1560 DEEQEENEQ 1568
Score = 55 (24.4 bits), Expect = 4.1e-27, Sum P(5) = 4.1e-27
Identities = 35/177 (19%), Positives = 80/177 (45%)
Query: 989 QDRAHRIGQKNEVRVL-RLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQ 1047
Q+R +R+ + R+ R+ + S+ + R K ++ K ++ F + + Q
Sbjct: 349 QEREYRL----QARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQR-----QLRQ 399
Query: 1048 FLQTILHQDDEEDEEENAVPDDETVNQML--ARSEEEFQTYQRIDAERRKEQGKKSRLIE 1105
+ + +D + N+ + Q L AR E+ + Q+I+ ER++ Q + L
Sbjct: 400 EVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNS 459
Query: 1106 VSELPDWLIKEDEEIEQW-AFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+ + K+ +E + A + ++ KA+ + +R+Q T+ + EKE ++ +
Sbjct: 460 ILQHA----KDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERI-EKERMRRL 511
Score = 50 (22.7 bits), Expect = 3.8e-302, Sum P(5) = 3.8e-302
Identities = 36/158 (22%), Positives = 70/158 (44%)
Query: 192 PKPEGLDPLIILQERENRVALNIERRIEELNG-SLTSTLPEH-LRVKAEIELRALKVLNF 249
P P P++ LQ++++R++ I++ G L E R++A I R ++ +
Sbjct: 315 PAPGQPSPVLQLQQKQSRIS-----PIQKPQGLDPVEILQEREYRLQARIAHRIQELESL 369
Query: 250 QRQLRAEVIACARRDTTLET-AVNVKAYKRTKRQGLKEA-RATEKLEKQQKVEA-ERKKR 306
L ++ R T+E A+ + ++R RQ + R LE +A +R KR
Sbjct: 370 PGSLPPDL----RTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKR 425
Query: 307 QKHQEY-ITTVLQHCKDFKEYHRNNQARIMRLNKAVMN 343
Q +E +T L+ + ++ + Q LN + +
Sbjct: 426 QTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQH 463
Score = 48 (22.0 bits), Expect = 0., Sum P(5) = 0.
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 50 PQENLTALQRAIDSMKEQGLEED 72
PQE + L + +D + ++G+ ED
Sbjct: 66 PQEGMHQLHKPMDGIHDKGIVED 88
Score = 45 (20.9 bits), Expect = 2.0e-81, Sum P(4) = 2.0e-81
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 1055 QDDEEDEEENAVPDDETVNQMLARSEE-EFQTYQRIDAERRKEQGKK 1100
++ EE+ E DDE ++ A+S + + + ++ + R +GKK
Sbjct: 1497 EESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKK 1543
Score = 41 (19.5 bits), Expect = 0., Sum P(4) = 0.
Identities = 21/94 (22%), Positives = 40/94 (42%)
Query: 51 QENLTALQRAIDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQQLRFQIMAYRLL 110
+ L +Q+ ++Q ++ + Q+ + + + + A AQ QQ + Q L+
Sbjct: 203 KRTLPGMQQQQQQQQQQQQQQQQQQQQQQQQQQPQQPQQQA--QAQPQQQQQQQQQPALV 260
Query: 111 ARNQPLTP--QLAMGVQG---KRMEGVPSGPQMP 139
+ N+P P +L + Q K PSG P
Sbjct: 261 SYNRPSGPGQELLLSGQSAPQKLSAPAPSGRPSP 294
Score = 41 (19.5 bits), Expect = 1.4e-287, Sum P(3) = 1.4e-287
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 62 DSMKEQGLEEDPRYQKLIEMKANR 85
+ M+ E++ Y+KLI+ K +R
Sbjct: 506 ERMRRLMAEDEEGYRKLIDQKKDR 529
Score = 41 (19.5 bits), Expect = 2.3e-108, Sum P(5) = 2.3e-108
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 1037 DQKSTGSERHQFLQTILHQDDEEDEEENAVP---------DDETVNQMLARSEEEFQTYQ 1087
D++ S + + +L + EE E++A DDE Q AR + + T
Sbjct: 651 DEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVA 710
Query: 1088 RIDAERRKEQ 1097
+ER ++Q
Sbjct: 711 HAISERVEKQ 720
Score = 41 (19.5 bits), Expect = 2.8e-26, Sum P(4) = 2.8e-26
Identities = 26/128 (20%), Positives = 55/128 (42%)
Query: 191 IPKPEGLDPLIILQERENRV--ALNIERRIEELNGSLTST-------LPEHLRVKAEIEL 241
+P E L+ +I +E E + ++++RR E+ LP + +K + E+
Sbjct: 1238 VPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWI-IKDDAEV 1296
Query: 242 RALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA 301
L + ++ + RRD A+ K + R G E E +++V
Sbjct: 1297 ERLTCEEEEEKIFGRG-SRQRRDVDYSDALTEKQWLRAIEDGNLE-------EMEEEVRL 1348
Query: 302 ERKKRQKH 309
+++KR+++
Sbjct: 1349 KKRKRRRN 1356
Score = 40 (19.1 bits), Expect = 1.4e-81, Sum P(5) = 1.4e-81
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 1283 ELQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+L D K + A +++++ S HE L+++ + E E PD+
Sbjct: 1196 KLNVDQKVI--QAGMFDQKSSS-HERRAFLQAILEHEEENEEEDEVPDD 1241
Score = 39 (18.8 bits), Expect = 3.8e-108, Sum P(5) = 3.8e-108
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 1057 DEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKK 1100
+EEDEEE + ET ++L E + ++ DA++ E K+
Sbjct: 648 EEEDEEEES-SRQETEEKILLDPNSE-EVSEK-DAKQIIETAKQ 688
Score = 38 (18.4 bits), Expect = 7.0e-301, Sum P(5) = 7.0e-301
Identities = 6/35 (17%), Positives = 23/35 (65%)
Query: 277 KRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQE 311
++ ++Q ++ + + + QQ+ +A+ +++Q+ Q+
Sbjct: 221 QQQQQQQQQQQQQQQPQQPQQQAQAQPQQQQQQQQ 255
Score = 37 (18.1 bits), Expect = 0., Sum P(5) = 0.
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 133 PSGPQMPP 140
P+ PQMPP
Sbjct: 137 PTPPQMPP 144
Score = 37 (18.1 bits), Expect = 7.1e-26, Sum P(4) = 7.1e-26
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 268 ETAVNVKAYKRTKRQGLKEARATEKLEKQQK 298
E V+ KR +R+ + + E +EK +K
Sbjct: 1341 EMEEEVRLKKRKRRRNVDKDPVKEDVEKAKK 1371
>UNIPROTKB|E9PTG1 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ GO:GO:0035887 IPI:IPI00464435
Ensembl:ENSRNOT00000016740 ArrayExpress:E9PTG1 Uniprot:E9PTG1
Length = 1597
Score = 2466 (873.1 bits), Expect = 0., Sum P(4) = 0.
Identities = 462/634 (72%), Positives = 549/634 (86%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY++AH + E V +Q+++L+NG LK YQ++GLEWMVSL+NNNLNGILADEMGLGKTIQT
Sbjct: 707 SYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQT 766
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IALITYLME K++NGP+LIIVPLSTLSNW+ EF++WAPSV ++YKG+P +R++L Q++
Sbjct: 767 IALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLR 826
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFNVLLTTYEY+IKDK LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP R+LL
Sbjct: 827 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 886
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGE+V+LNEEETILIIRRLH
Sbjct: 887 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLH 946
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVESQLP+KVEY+IKCDMS LQK+LYRHM KGILLTDGSE
Sbjct: 947 KVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGK 1006
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGS-GIVSGPDLYRVSGKFELLDRIL 891
LMNTI+QLRK+CNHP+MFQ+IEE F++H+G S G+++G +LYR SGKFELLDRIL
Sbjct: 1007 GGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRIL 1066
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL++T HRVLLFCQMT LM I+EDYF++R F Y+RLDGTTK+EDR LLKKFN P S+Y
Sbjct: 1067 PKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQY 1126
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIF+LSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 1127 FIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1186
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDET 1071
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +EE+EEE+ VPDDET
Sbjct: 1187 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEENEEEDEVPDDET 1245
Query: 1072 VNQMLARSEEEFQTYQRIDAERRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEA 1127
+NQM+AR EEEF + R+D +RR+E + K RL+E ELP W+IK+D E+E+ E
Sbjct: 1246 LNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCE- 1304
Query: 1128 KEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+EEEK GRGSRQR+ VDY+D+LTEK+WL+AI
Sbjct: 1305 EEEEKIF--GRGSRQRRDVDYSDALTEKQWLRAI 1336
Score = 773 (277.2 bits), Expect = 0., Sum P(4) = 0.
Identities = 160/309 (51%), Positives = 206/309 (66%)
Query: 182 QIKQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIEL 241
Q KQS+++ I KP+GLDP+ ILQERE R+ I RI+EL SL +LP LR KA +EL
Sbjct: 329 QQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELE-SLPGSLPPDLRTKATVEL 387
Query: 242 RALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA 301
+AL++LNFQRQLR EV+AC RRDTTLETA+N KAYKR+KRQ L+EAR TEKLEKQQK+E
Sbjct: 388 KALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQ 447
Query: 302 ERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXX 361
ERK+RQKHQEY+ ++LQH KDFKEYHR+ +I +L+KAV +HAN
Sbjct: 448 ERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEK 507
Query: 362 XXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXXXXX 421
LMAEDEEGYRKLIDQKKD+RLA+LL QTDEY++NLT
Sbjct: 508 ERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRR 567
Query: 422 XXXXSVKQKLMDTDGKVTLDQ---DETSQLTDMHISVREISSGKVLKGEDAPLAAHLKQW 478
++ + + D DE+SQ++D+ + V +GKVL G +AP A+ L W
Sbjct: 568 RRRKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAW 627
Query: 479 IQDHPGWEV 487
++ +PG+EV
Sbjct: 628 LEMNPGYEV 636
Score = 278 (102.9 bits), Expect = 0., Sum P(4) = 0.
Identities = 55/98 (56%), Positives = 73/98 (74%)
Query: 1234 DSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDELQKDFKTLCR 1293
+S GR LSE FI+LPSRKELP+YYE+I +P+D KKI RI + KY S+ +L+KD LC
Sbjct: 1424 NSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCH 1483
Query: 1294 NAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
NAQ +N E S I+EDS+VL+SVF ARQ++ E+ +E
Sbjct: 1484 NAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEE 1521
Score = 106 (42.4 bits), Expect = 0., Sum P(4) = 0.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 92 FTSAQVQQLRFQIMAYRLLARNQPLTPQLAMGVQGKR 128
F+ Q+ QLR QI+AY++LAR QPL L + VQGKR
Sbjct: 174 FSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKR 210
Score = 60 (26.2 bits), Expect = 4.5e-26, Sum P(3) = 4.5e-26
Identities = 31/135 (22%), Positives = 62/135 (45%)
Query: 1026 MDEKVIQAGMFDQKSTGSERHQ-FLQTIL-HQDDEEDEEENAVPDDETVNQMLARSEEEF 1083
M EK+ + +Q+ ++HQ +L +IL H D ++ + + +++ +A
Sbjct: 435 MTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVA------ 488
Query: 1084 QTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQR 1143
T+ A +EQ K++ IE + L+ EDEE + + K++ + ++
Sbjct: 489 -TWH---ANTEREQKKETERIEKERMRR-LMAEDEEGYRKLIDQKKDRRLAYL------L 537
Query: 1144 KQVD-YTDSLTEKEW 1157
+Q D Y +LT W
Sbjct: 538 QQTDEYVANLTNLVW 552
Score = 58 (25.5 bits), Expect = 0., Sum P(4) = 0.
Identities = 24/93 (25%), Positives = 37/93 (39%)
Query: 50 PQENLTALQRAIDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQQLRFQIMAYRL 109
PQE L L + +D + ++G+ ED MK H + Y +
Sbjct: 66 PQEGLHQLHKPMDGIHDKGIVEDVHCGS---MKGTSMRPPHPGMGPPQSPMDQHSQGY-M 121
Query: 110 LARNQPL-TPQ-LAMGVQGKRMEGVPSGPQMPP 140
PL P+ ++ + G G P+ PQMPP
Sbjct: 122 SPHPSPLGAPEHVSSPISG----GGPTPPQMPP 150
Score = 55 (24.4 bits), Expect = 1.5e-25, Sum P(3) = 1.5e-25
Identities = 35/177 (19%), Positives = 80/177 (45%)
Query: 989 QDRAHRIGQKNEVRVL-RLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQ 1047
Q+R +R+ + R+ R+ + S+ + R K ++ K ++ F + + Q
Sbjct: 351 QEREYRL----QARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQR-----QLRQ 401
Query: 1048 FLQTILHQDDEEDEEENAVPDDETVNQML--ARSEEEFQTYQRIDAERRKEQGKKSRLIE 1105
+ + +D + N+ + Q L AR E+ + Q+I+ ER++ Q + L
Sbjct: 402 EVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNS 461
Query: 1106 VSELPDWLIKEDEEIEQW-AFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+ + K+ +E + A + ++ KA+ + +R+Q T+ + EKE ++ +
Sbjct: 462 ILQHA----KDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERI-EKERMRRL 513
Score = 50 (22.7 bits), Expect = 3.0e-296, Sum P(4) = 3.0e-296
Identities = 36/158 (22%), Positives = 70/158 (44%)
Query: 192 PKPEGLDPLIILQERENRVALNIERRIEELNG-SLTSTLPEH-LRVKAEIELRALKVLNF 249
P P P++ LQ++++R++ I++ G L E R++A I R ++ +
Sbjct: 317 PAPGQPSPVLQLQQKQSRIS-----PIQKPQGLDPVEILQEREYRLQARIAHRIQELESL 371
Query: 250 QRQLRAEVIACARRDTTLET-AVNVKAYKRTKRQGLKEA-RATEKLEKQQKVEA-ERKKR 306
L ++ R T+E A+ + ++R RQ + R LE +A +R KR
Sbjct: 372 PGSLPPDL----RTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKR 427
Query: 307 QKHQEY-ITTVLQHCKDFKEYHRNNQARIMRLNKAVMN 343
Q +E +T L+ + ++ + Q LN + +
Sbjct: 428 QTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQH 465
Score = 50 (22.7 bits), Expect = 8.1e-81, Sum P(3) = 8.1e-81
Identities = 16/78 (20%), Positives = 40/78 (51%)
Query: 1054 HQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWL 1113
++++EE++EE + + ++V + +++E + ++R +GK + VS+
Sbjct: 1524 NEEEEEEDEEESEAEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPV--VSDFDS-- 1579
Query: 1114 IKEDEEIEQWAFEAKEEE 1131
+E +E EQ ++E
Sbjct: 1580 DEEQDENEQSEASGTDDE 1597
Score = 44 (20.5 bits), Expect = 3.5e-80, Sum P(3) = 3.5e-80
Identities = 12/44 (27%), Positives = 26/44 (59%)
Query: 1057 DEEDEEENAVPDDETVNQMLARSEEEFQTYQ-RIDAERRKEQGK 1099
+EE EEE+ ++E + SE E ++ + +I +++E+G+
Sbjct: 1516 EEESEEESNEEEEEEDEE---ESEAEAKSVKVKIKLNKKEEKGR 1556
Score = 41 (19.5 bits), Expect = 1.4e-285, Sum P(3) = 1.4e-285
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 62 DSMKEQGLEEDPRYQKLIEMKANR 85
+ M+ E++ Y+KLI+ K +R
Sbjct: 508 ERMRRLMAEDEEGYRKLIDQKKDR 531
Score = 41 (19.5 bits), Expect = 5.1e-105, Sum P(4) = 5.1e-105
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 1037 DQKSTGSERHQFLQTILHQDDEEDEEENAVP---------DDETVNQMLARSEEEFQTYQ 1087
D++ S + + +L + EE E++A DDE Q AR + + T
Sbjct: 653 DEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVA 712
Query: 1088 RIDAERRKEQ 1097
+ER ++Q
Sbjct: 713 HAISERVEKQ 722
Score = 41 (19.5 bits), Expect = 7.2e-80, Sum P(3) = 7.2e-80
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 1055 QDDEEDEEENAVPDDETVNQMLARSEE-EFQTYQRIDAERRKEQGKK 1100
++ EE+ E +DE ++ A+S + + + ++ + R +GKK
Sbjct: 1517 EESEEESNEEEEEEDEEESEAEAKSVKVKIKLNKKEEKGRDTGKGKK 1563
Score = 41 (19.5 bits), Expect = 4.1e-24, Sum P(3) = 4.1e-24
Identities = 26/128 (20%), Positives = 55/128 (42%)
Query: 191 IPKPEGLDPLIILQERENRV--ALNIERRIEELNGSLTST-------LPEHLRVKAEIEL 241
+P E L+ +I +E E + ++++RR E+ LP + +K + E+
Sbjct: 1240 VPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWI-IKDDAEV 1298
Query: 242 RALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA 301
L + ++ + RRD A+ K + R G E E +++V
Sbjct: 1299 ERLTCEEEEEKIFGRG-SRQRRDVDYSDALTEKQWLRAIEDGNLE-------EMEEEVRL 1350
Query: 302 ERKKRQKH 309
+++KR+++
Sbjct: 1351 KKRKRRRN 1358
Score = 40 (19.1 bits), Expect = 4.0e-290, Sum P(4) = 4.0e-290
Identities = 12/72 (16%), Positives = 36/72 (50%)
Query: 240 ELRALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKV 299
++ A K+L + L + + TL + ++ ++Q ++ + + + QQ+
Sbjct: 185 QILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQPQQPQQPQQQT 244
Query: 300 EAERKKRQKHQE 311
+A+ +++Q+ Q+
Sbjct: 245 QAQPQQQQQQQQ 256
Score = 40 (19.1 bits), Expect = 4.1e-80, Sum P(4) = 4.1e-80
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 1283 ELQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+L D K + A +++++ S HE L+++ + E E PD+
Sbjct: 1198 KLNVDQKVI--QAGMFDQKSSS-HERRAFLQAILEHEEENEEEDEVPDD 1243
Score = 39 (18.8 bits), Expect = 0., Sum P(4) = 0.
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 1114 IKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKE 1156
I ++EE E+ E+ EEE+ + K V L +KE
Sbjct: 1513 IAKEEESEE---ESNEEEEEEDEEESEAEAKSVKVKIKLNKKE 1552
Score = 39 (18.8 bits), Expect = 8.3e-105, Sum P(4) = 8.3e-105
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 1057 DEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKK 1100
+EEDEEE + ET ++L E + ++ DA++ E K+
Sbjct: 650 EEEDEEEES-SRQETEEKILLDPNSE-EVSEK-DAKQIIETAKQ 690
Score = 37 (18.1 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 268 ETAVNVKAYKRTKRQGLKEARATEKLEKQQK 298
E V+ KR +R+ + + E +EK +K
Sbjct: 1343 EMEEEVRLKKRKRRRNVDKDPVKEDVEKAKK 1373
>UNIPROTKB|E2RKP4 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285
GO:GO:0030308 GO:GO:0045944 GO:GO:0044212 GO:GO:0045111
GO:GO:0000790 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071778 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0035887
EMBL:AAEX03000600 Ensembl:ENSCAFT00000003206 NextBio:20852013
Uniprot:E2RKP4
Length = 1556
Score = 2466 (873.1 bits), Expect = 0., Sum P(4) = 0.
Identities = 462/634 (72%), Positives = 549/634 (86%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY++AH + E V +Q+++L+NG LK YQ++GLEWMVSL+NNNLNGILADEMGLGKTIQT
Sbjct: 684 SYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQT 743
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IALITYLME K++NGP+LIIVPLSTLSNW+ EF++WAPSV ++YKG+P +R++L Q++
Sbjct: 744 IALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLR 803
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFNVLLTTYEY+IKDK LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP R+LL
Sbjct: 804 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 863
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGE+V+LNEEETILIIRRLH
Sbjct: 864 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLH 923
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVESQLP+KVEY+IKCDMS LQK+LYRHM KGILLTDGSE
Sbjct: 924 KVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGK 983
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGS-GIVSGPDLYRVSGKFELLDRIL 891
LMNTI+QLRK+CNHP+MFQ+IEE F++H+G S G+++G +LYR SGKFELLDRIL
Sbjct: 984 GGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRIL 1043
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL++T HRVLLFCQMT LM I+EDYF++R F Y+RLDGTTK+EDR LLKKFN P S+Y
Sbjct: 1044 PKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQY 1103
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIF+LSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 1104 FIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1163
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDET 1071
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +EE+EEE+ VPDDET
Sbjct: 1164 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEENEEEDEVPDDET 1222
Query: 1072 VNQMLARSEEEFQTYQRIDAERRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEA 1127
+NQM+AR EEEF + R+D +RR+E + K RL+E ELP W+IK+D E+E+ E
Sbjct: 1223 LNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCE- 1281
Query: 1128 KEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+EEEK GRGSRQR+ VDY+D+LTEK+WL+AI
Sbjct: 1282 EEEEKIF--GRGSRQRRDVDYSDALTEKQWLRAI 1313
Score = 769 (275.8 bits), Expect = 0., Sum P(4) = 0.
Identities = 159/309 (51%), Positives = 206/309 (66%)
Query: 182 QIKQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIEL 241
Q KQS+++ I KP+GLDP+ ILQERE R+ I RI+EL +L +LP LR KA +EL
Sbjct: 306 QQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELE-NLPGSLPPDLRTKATVEL 364
Query: 242 RALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA 301
+AL++LNFQRQLR EV+AC RRDTTLETA+N KAYKR+KRQ L+EAR TEKLEKQQK+E
Sbjct: 365 KALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQ 424
Query: 302 ERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXX 361
ERK+RQKHQEY+ ++LQH KDFKEYHR+ +I +L+KAV +HAN
Sbjct: 425 ERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEK 484
Query: 362 XXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXXXXX 421
LMAEDEEGYRKLIDQKKD+RLA+LL QTDEY++NLT
Sbjct: 485 ERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRR 544
Query: 422 XXXXSVKQKLMDTDGKVTLDQ---DETSQLTDMHISVREISSGKVLKGEDAPLAAHLKQW 478
++ + + D DE+SQ++D+ + V +GKVL G +AP A+ L W
Sbjct: 545 RRKKKAEEIAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAW 604
Query: 479 IQDHPGWEV 487
++ +PG+EV
Sbjct: 605 LEMNPGYEV 613
Score = 297 (109.6 bits), Expect = 0., Sum P(4) = 0.
Identities = 59/107 (55%), Positives = 78/107 (72%)
Query: 1225 IMRVVIKYTDSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDEL 1284
I+ VI Y DS GR LSE FI+LPSRKELP+YYE+I +P+D KKI RI + KY S+ +L
Sbjct: 1374 IIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDL 1433
Query: 1285 QKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+KD LC NAQ +N E S I+EDS+VL+SVF ARQ++ E+ ++
Sbjct: 1434 EKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESED 1480
Score = 109 (43.4 bits), Expect = 0., Sum P(4) = 0.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 92 FTSAQVQQLRFQIMAYRLLARNQPLTPQLAMGVQGKRMEGVPSGPQMPP 140
F+ Q+ QLR QI+AY++LAR QPL L + VQGKR +P Q P
Sbjct: 174 FSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRT--LPGMQQQQP 220
Score = 60 (26.2 bits), Expect = 1.8e-28, Sum P(3) = 1.8e-28
Identities = 31/135 (22%), Positives = 62/135 (45%)
Query: 1026 MDEKVIQAGMFDQKSTGSERHQ-FLQTIL-HQDDEEDEEENAVPDDETVNQMLARSEEEF 1083
M EK+ + +Q+ ++HQ +L +IL H D ++ + + +++ +A
Sbjct: 412 MTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVA------ 465
Query: 1084 QTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQR 1143
T+ A +EQ K++ IE + L+ EDEE + + K++ + ++
Sbjct: 466 -TWH---ANTEREQKKETERIEKERMRR-LMAEDEEGYRKLIDQKKDRRLAYL------L 514
Query: 1144 KQVD-YTDSLTEKEW 1157
+Q D Y +LT W
Sbjct: 515 QQTDEYVANLTNLVW 529
Score = 59 (25.8 bits), Expect = 0., Sum P(4) = 0.
Identities = 24/92 (26%), Positives = 34/92 (36%)
Query: 50 PQENLTALQRAIDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQQLRFQIMAYRL 109
PQE + + + ID M ++G+ ED MK H + Y +
Sbjct: 66 PQEGMHQMHKPIDGMHDKGIVEDIHCGS---MKGTGMRPPHPGMGPPQSPMDQHSQGY-M 121
Query: 110 LARNQPL-TPQLAMGVQGKRMEGVPSGPQMPP 140
PL P+ V G P+ PQMPP
Sbjct: 122 SPHPSPLGAPE---HVSSPMSGGGPTPPQMPP 150
Score = 56 (24.8 bits), Expect = 3.4e-299, Sum P(4) = 3.4e-299
Identities = 37/158 (23%), Positives = 70/158 (44%)
Query: 192 PKPEGLDPLIILQERENRVALNIERRIEELNG-SLTSTLPEH-LRVKAEIELRALKVLNF 249
P P P++ LQ++++R++ I++ G L E R++A I R ++ N
Sbjct: 294 PAPGQPSPILQLQQKQSRIS-----PIQKPQGLDPVEILQEREYRLQARIAHRIQELENL 348
Query: 250 QRQLRAEVIACARRDTTLET-AVNVKAYKRTKRQGLKEA-RATEKLEKQQKVEA-ERKKR 306
L ++ R T+E A+ + ++R RQ + R LE +A +R KR
Sbjct: 349 PGSLPPDL----RTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKR 404
Query: 307 QKHQEY-ITTVLQHCKDFKEYHRNNQARIMRLNKAVMN 343
Q +E +T L+ + ++ + Q LN + +
Sbjct: 405 QTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQH 442
Score = 52 (23.4 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 20/86 (23%), Positives = 44/86 (51%)
Query: 1077 ARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQW-AFEAKEEEKALH 1135
AR E+ + Q+I+ ER++ Q + L + + K+ +E + A + ++ KA+
Sbjct: 410 ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHA----KDFKEYHRSVAGKIQKLSKAVA 465
Query: 1136 MGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+ +R+Q T+ + EKE ++ +
Sbjct: 466 TWHANTEREQKKETERI-EKERMRRL 490
Score = 50 (22.7 bits), Expect = 1.1e-80, Sum P(3) = 1.1e-80
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 1050 QTILHQDDEEDEE-ENAVPDDETVNQMLARSEE-EFQTYQRIDAERRKEQGKK 1100
Q I +++ EDE E +DE ++ A+S + + + ++ + R K +GKK
Sbjct: 1470 QKIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKK 1522
Score = 50 (22.7 bits), Expect = 1.1e-80, Sum P(3) = 1.1e-80
Identities = 15/78 (19%), Positives = 41/78 (52%)
Query: 1054 HQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWL 1113
++++EE++EE + + ++V + ++++ + + ++R +GK + VS+
Sbjct: 1483 NEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPV--VSDFDS-- 1538
Query: 1114 IKEDEEIEQWAFEAKEEE 1131
+E +E EQ ++E
Sbjct: 1539 DEEQDENEQSEASGTDDE 1556
Score = 42 (19.8 bits), Expect = 5.3e-107, Sum P(4) = 5.3e-107
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 1057 DEEDEEENAVPDDETVNQMLARSEEE 1082
+EEDEEE + D +L + EE
Sbjct: 627 EEEDEEEESSRQDTEEKILLDPNSEE 652
Score = 41 (19.5 bits), Expect = 1.4e-287, Sum P(3) = 1.4e-287
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 62 DSMKEQGLEEDPRYQKLIEMKANR 85
+ M+ E++ Y+KLI+ K +R
Sbjct: 485 ERMRRLMAEDEEGYRKLIDQKKDR 508
Score = 41 (19.5 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 268 ETAVNVKAYKRTKRQGLKEARATEKLEKQQK 298
E V+ KR +R+ + + A E +EK +K
Sbjct: 1320 EMEEEVRLKKRKRRRNVDKDPAKEDVEKAKK 1350
Score = 41 (19.5 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 26/128 (20%), Positives = 55/128 (42%)
Query: 191 IPKPEGLDPLIILQERENRV--ALNIERRIEELNGSLTST-------LPEHLRVKAEIEL 241
+P E L+ +I +E E + ++++RR E+ LP + +K + E+
Sbjct: 1217 VPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWI-IKDDAEV 1275
Query: 242 RALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA 301
L + ++ + RRD A+ K + R G E E +++V
Sbjct: 1276 ERLTCEEEEEKIFGRG-SRQRRDVDYSDALTEKQWLRAIEDGNLE-------EMEEEVRL 1327
Query: 302 ERKKRQKH 309
+++KR+++
Sbjct: 1328 KKRKRRRN 1335
Score = 40 (19.1 bits), Expect = 8.7e-107, Sum P(4) = 8.7e-107
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 1068 DDETVNQMLARSEEEFQTYQRIDAERRKEQ 1097
DDE Q AR + + T +ER ++Q
Sbjct: 670 DDEYSMQYSARGSQSYYTVAHAISERVEKQ 699
Score = 40 (19.1 bits), Expect = 4.2e-80, Sum P(4) = 4.2e-80
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 1283 ELQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+L D K + A +++++ S HE L+++ + E E PD+
Sbjct: 1175 KLNVDQKVI--QAGMFDQKSSS-HERRAFLQAILEHEEENEEEDEVPDD 1220
>UNIPROTKB|A5PKK5 [details] [associations]
symbol:SMARCA2 "SMARCA2 protein" species:9913 "Bos taurus"
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OMA:PQEGMHQ GO:GO:0035887 OrthoDB:EOG418BMJ EMBL:DAAA02022747
EMBL:DAAA02022748 EMBL:DAAA02022749 EMBL:BC142521 IPI:IPI00854472
RefSeq:NP_001092585.1 UniGene:Bt.63204 SMR:A5PKK5 STRING:A5PKK5
Ensembl:ENSBTAT00000035681 GeneID:540904 KEGG:bta:540904
InParanoid:A5PKK5 NextBio:20878906 Uniprot:A5PKK5
Length = 1554
Score = 2466 (873.1 bits), Expect = 0., Sum P(4) = 0.
Identities = 462/634 (72%), Positives = 549/634 (86%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY++AH + E V +Q+++L+NG LK YQ++GLEWMVSL+NNNLNGILADEMGLGKTIQT
Sbjct: 682 SYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQT 741
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IALITYLME K++NGP+LIIVPLSTLSNW+ EF++WAPSV ++YKG+P +R++L Q++
Sbjct: 742 IALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLR 801
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFNVLLTTYEY+IKDK LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP R+LL
Sbjct: 802 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 861
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGE+V+LNEEETILIIRRLH
Sbjct: 862 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLH 921
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVESQLP+KVEY+IKCDMS LQK+LYRHM KGILLTDGSE
Sbjct: 922 KVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGK 981
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGS-GIVSGPDLYRVSGKFELLDRIL 891
LMNTI+QLRK+CNHP+MFQ+IEE F++H+G S G+++G +LYR SGKFELLDRIL
Sbjct: 982 GGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRIL 1041
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL++T HRVLLFCQMT LM I+EDYF++R F Y+RLDGTTK+EDR LLKKFN P S+Y
Sbjct: 1042 PKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQY 1101
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIF+LSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 1102 FIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1161
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDET 1071
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +EE+EEE+ VPDDET
Sbjct: 1162 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEENEEEDEVPDDET 1220
Query: 1072 VNQMLARSEEEFQTYQRIDAERRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEA 1127
+NQM+AR EEEF + R+D +RR+E + K RL+E ELP W+IK+D E+E+ E
Sbjct: 1221 LNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCE- 1279
Query: 1128 KEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+EEEK GRGSRQR+ VDY+D+LTEK+WL+AI
Sbjct: 1280 EEEEKIF--GRGSRQRRDVDYSDALTEKQWLRAI 1311
Score = 769 (275.8 bits), Expect = 0., Sum P(4) = 0.
Identities = 157/309 (50%), Positives = 206/309 (66%)
Query: 182 QIKQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIEL 241
Q KQS+++ + KP+GLDP+ I+QERE R+ I RI+EL +L +LP LR KA +EL
Sbjct: 304 QQKQSRISPVQKPQGLDPVEIMQEREYRLQARIAHRIQELE-NLPGSLPPDLRTKATVEL 362
Query: 242 RALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA 301
+AL++LNFQRQLR EV+AC RRDTTLETA+N KAYKR+KRQ L+EAR TEKLEKQQK+E
Sbjct: 363 KALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQ 422
Query: 302 ERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXX 361
ERK+RQKHQEY+ ++LQH KDFKEYHR+ +I +L+KAV +HAN
Sbjct: 423 ERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEK 482
Query: 362 XXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXXXXX 421
LMAEDEEGYRKLIDQKKD+RLA+LL QTDEY++NLT
Sbjct: 483 ERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRR 542
Query: 422 XXXXSVKQKLMDTDGKVTLDQ---DETSQLTDMHISVREISSGKVLKGEDAPLAAHLKQW 478
++ + + D DE+SQ++D+ + V +GKVL G +AP A+ L W
Sbjct: 543 RKKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAW 602
Query: 479 IQDHPGWEV 487
++ +PG+EV
Sbjct: 603 LEMNPGYEV 611
Score = 297 (109.6 bits), Expect = 0., Sum P(4) = 0.
Identities = 59/107 (55%), Positives = 78/107 (72%)
Query: 1225 IMRVVIKYTDSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDEL 1284
I+ VI Y DS GR LSE FI+LPSRKELP+YYE+I +P+D KKI RI + KY S+ +L
Sbjct: 1372 IIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDL 1431
Query: 1285 QKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+KD LC NAQ +N E S I+EDS+VL+SVF ARQ++ E+ ++
Sbjct: 1432 EKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESED 1478
Score = 117 (46.2 bits), Expect = 0., Sum P(4) = 0.
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 92 FTSAQVQQLRFQIMAYRLLARNQPLTPQLAMGVQGKRMEGVPSGPQMPP 140
F+ Q+ QLR QI+AY++LAR QPL L + VQGKR +P Q PP
Sbjct: 173 FSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRT--LPGMQQQPP 219
Score = 60 (26.2 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 31/135 (22%), Positives = 62/135 (45%)
Query: 1026 MDEKVIQAGMFDQKSTGSERHQ-FLQTIL-HQDDEEDEEENAVPDDETVNQMLARSEEEF 1083
M EK+ + +Q+ ++HQ +L +IL H D ++ + + +++ +A
Sbjct: 410 MTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVA------ 463
Query: 1084 QTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQR 1143
T+ A +EQ K++ IE + L+ EDEE + + K++ + ++
Sbjct: 464 -TWH---ANTEREQKKETERIEKERMRR-LMAEDEEGYRKLIDQKKDRRLAYL------L 512
Query: 1144 KQVD-YTDSLTEKEW 1157
+Q D Y +LT W
Sbjct: 513 QQTDEYVANLTNLVW 527
Score = 53 (23.7 bits), Expect = 1.0e-299, Sum P(4) = 1.0e-299
Identities = 35/156 (22%), Positives = 72/156 (46%)
Query: 192 PKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQR 251
P P P++ LQ++++R++ +++ + L+ E+ R++A I R ++ N
Sbjct: 292 PAPGQPSPILQLQQKQSRIS-PVQKP-QGLDPVEIMQEREY-RLQARIAHRIQELENLPG 348
Query: 252 QLRAEVIACARRDTTLET-AVNVKAYKRTKRQGLKEA-RATEKLEKQQKVEA-ERKKRQK 308
L ++ R T+E A+ + ++R RQ + R LE +A +R KRQ
Sbjct: 349 SLPPDL----RTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQT 404
Query: 309 HQEY-ITTVLQHCKDFKEYHRNNQARIMRLNKAVMN 343
+E +T L+ + ++ + Q LN + +
Sbjct: 405 LREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQH 440
Score = 52 (23.4 bits), Expect = 1.8e-28, Sum P(3) = 1.8e-28
Identities = 20/86 (23%), Positives = 44/86 (51%)
Query: 1077 ARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQW-AFEAKEEEKALH 1135
AR E+ + Q+I+ ER++ Q + L + + K+ +E + A + ++ KA+
Sbjct: 408 ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHA----KDFKEYHRSVAGKIQKLSKAVA 463
Query: 1136 MGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+ +R+Q T+ + EKE ++ +
Sbjct: 464 TWHANTEREQKKETERI-EKERMRRL 488
Score = 50 (22.7 bits), Expect = 0., Sum P(4) = 0.
Identities = 22/93 (23%), Positives = 37/93 (39%)
Query: 50 PQENLTALQRAIDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQQLRFQIMAYRL 109
PQE + + + +D M ++G+E+ MK H + Y +
Sbjct: 66 PQEGMHQMHKPMDGMHDKGVEDI----HCGSMKGTAMRPPHPGMGPPQSPMDQHSQGY-M 120
Query: 110 LARNQPL-TPQ-LAMGVQGKRMEGVPSGPQMPP 140
PL P+ ++ + G G P+ PQMPP
Sbjct: 121 SPHPSPLGAPEHVSSPISG----GGPTPPQMPP 149
Score = 50 (22.7 bits), Expect = 1.5e-81, Sum P(3) = 1.5e-81
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 1050 QTILHQDDEEDEE-ENAVPDDETVNQMLARSEE-EFQTYQRIDAERRKEQGKK 1100
Q I +++ EDE E +DE ++ A+S + + + ++ + R K +GKK
Sbjct: 1468 QKIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKK 1520
Score = 50 (22.7 bits), Expect = 1.5e-81, Sum P(3) = 1.5e-81
Identities = 15/78 (19%), Positives = 41/78 (52%)
Query: 1054 HQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWL 1113
++++EE++EE + + ++V + ++++ + + ++R +GK + VS+
Sbjct: 1481 NEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPV--VSDFDS-- 1536
Query: 1114 IKEDEEIEQWAFEAKEEE 1131
+E +E EQ ++E
Sbjct: 1537 DEEQDENEQSEASGTDDE 1554
Score = 41 (19.5 bits), Expect = 1.4e-287, Sum P(3) = 1.4e-287
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 62 DSMKEQGLEEDPRYQKLIEMKANR 85
+ M+ E++ Y+KLI+ K +R
Sbjct: 483 ERMRRLMAEDEEGYRKLIDQKKDR 506
Score = 41 (19.5 bits), Expect = 9.7e-108, Sum P(4) = 9.7e-108
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 1037 DQKSTGSERHQFLQTILHQDDEEDEEENAVP---------DDETVNQMLARSEEEFQTYQ 1087
D++ S + + +L + EE E++A DDE Q AR + + T
Sbjct: 628 DEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVA 687
Query: 1088 RIDAERRKEQ 1097
+ER ++Q
Sbjct: 688 HAISERVEKQ 697
Score = 41 (19.5 bits), Expect = 2.5e-27, Sum P(3) = 2.5e-27
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 268 ETAVNVKAYKRTKRQGLKEARATEKLEKQQK 298
E V+ KR +R+ + + A E +EK +K
Sbjct: 1318 EMEEEVRLKKRKRRRNVDKDPAKEDVEKAKK 1348
Score = 41 (19.5 bits), Expect = 2.5e-27, Sum P(3) = 2.5e-27
Identities = 26/128 (20%), Positives = 55/128 (42%)
Query: 191 IPKPEGLDPLIILQERENRV--ALNIERRIEELNGSLTST-------LPEHLRVKAEIEL 241
+P E L+ +I +E E + ++++RR E+ LP + +K + E+
Sbjct: 1215 VPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWI-IKDDAEV 1273
Query: 242 RALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA 301
L + ++ + RRD A+ K + R G E E +++V
Sbjct: 1274 ERLTCEEEEEKIFGRG-SRQRRDVDYSDALTEKQWLRAIEDGNLE-------EMEEEVRL 1325
Query: 302 ERKKRQKH 309
+++KR+++
Sbjct: 1326 KKRKRRRN 1333
Score = 40 (19.1 bits), Expect = 7.6e-81, Sum P(4) = 7.6e-81
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 1283 ELQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+L D K + A +++++ S HE L+++ + E E PD+
Sbjct: 1173 KLNVDQKVI--QAGMFDQKSSS-HERRAFLQAILEHEEENEEEDEVPDD 1218
Score = 39 (18.8 bits), Expect = 1.6e-107, Sum P(4) = 1.6e-107
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 1057 DEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKK 1100
+EEDEEE + ET ++L E + ++ DA++ E K+
Sbjct: 625 EEEDEEEES-SRQETEEKILLDPNSE-EVSEK-DAKQIIETAKQ 665
>UNIPROTKB|P51531 [details] [associations]
symbol:SMARCA2 "Probable global transcription activator
SNF2L2" species:9606 "Homo sapiens" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0035887 "aortic
smooth muscle cell differentiation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0071778 "WINAC
complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IMP] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0008285 GO:GO:0007399
GO:GO:0005654 GO:GO:0030308 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 EMBL:CH471071 GO:GO:0004386
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 EMBL:X72889 EMBL:D26155 EMBL:AL359076 EMBL:AL138755
IPI:IPI00386718 IPI:IPI00514648 PIR:S39580 PIR:S45251
RefSeq:NP_003061.3 RefSeq:NP_620614.2 UniGene:Hs.298990 PDB:2DAT
PDBsum:2DAT ProteinModelPortal:P51531 SMR:P51531 DIP:DIP-29005N
IntAct:P51531 MINT:MINT-1898892 STRING:P51531 PhosphoSite:P51531
DMDM:212276472 PaxDb:P51531 PRIDE:P51531 DNASU:6595
Ensembl:ENST00000349721 Ensembl:ENST00000357248
Ensembl:ENST00000382194 Ensembl:ENST00000382203 GeneID:6595
KEGG:hsa:6595 UCSC:uc003zhc.3 UCSC:uc003zhd.3 CTD:6595
GeneCards:GC09P002005 HGNC:HGNC:11098 HPA:HPA029981 MIM:600014
MIM:601358 neXtProt:NX_P51531 Orphanet:3051 PharmGKB:PA35948
HOGENOM:HOG000172363 HOVERGEN:HBG056636 InParanoid:P51531
OMA:PQEGMHQ PhylomeDB:P51531 EvolutionaryTrace:P51531
GenomeRNAi:6595 NextBio:25649 PMAP-CutDB:P51531 ArrayExpress:P51531
Bgee:P51531 CleanEx:HS_SMARCA2 Genevestigator:P51531
GermOnline:ENSG00000080503 GO:GO:0035887 Uniprot:P51531
Length = 1590
Score = 2466 (873.1 bits), Expect = 0., Sum P(4) = 0.
Identities = 462/634 (72%), Positives = 549/634 (86%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY++AH + E V +Q+++L+NG LK YQ++GLEWMVSL+NNNLNGILADEMGLGKTIQT
Sbjct: 700 SYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQT 759
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IALITYLME K++NGP+LIIVPLSTLSNW+ EF++WAPSV ++YKG+P +R++L Q++
Sbjct: 760 IALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLR 819
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFNVLLTTYEY+IKDK LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP R+LL
Sbjct: 820 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 879
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGE+V+LNEEETILIIRRLH
Sbjct: 880 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLH 939
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVESQLP+KVEY+IKCDMS LQK+LYRHM KGILLTDGSE
Sbjct: 940 KVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGK 999
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGS-GIVSGPDLYRVSGKFELLDRIL 891
LMNTI+QLRK+CNHP+MFQ+IEE F++H+G S G+++G +LYR SGKFELLDRIL
Sbjct: 1000 GGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRIL 1059
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL++T HRVLLFCQMT LM I+EDYF++R F Y+RLDGTTK+EDR LLKKFN P S+Y
Sbjct: 1060 PKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQY 1119
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIF+LSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 1120 FIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1179
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDET 1071
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +EE+EEE+ VPDDET
Sbjct: 1180 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEENEEEDEVPDDET 1238
Query: 1072 VNQMLARSEEEFQTYQRIDAERRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEA 1127
+NQM+AR EEEF + R+D +RR+E + K RL+E ELP W+IK+D E+E+ E
Sbjct: 1239 LNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCE- 1297
Query: 1128 KEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+EEEK GRGSRQR+ VDY+D+LTEK+WL+AI
Sbjct: 1298 EEEEKIF--GRGSRQRRDVDYSDALTEKQWLRAI 1329
Score = 772 (276.8 bits), Expect = 0., Sum P(4) = 0.
Identities = 159/309 (51%), Positives = 206/309 (66%)
Query: 182 QIKQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIEL 241
Q KQS+++ I KP+GLDP+ ILQERE R+ I RI+EL +L +LP LR KA +EL
Sbjct: 322 QQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELE-NLPGSLPPDLRTKATVEL 380
Query: 242 RALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA 301
+AL++LNFQRQLR EV+AC RRDTTLETA+N KAYKR+KRQ L+EAR TEKLEKQQK+E
Sbjct: 381 KALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQ 440
Query: 302 ERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXX 361
ERK+RQKHQEY+ ++LQH KDFKEYHR+ +I +L+KAV +HAN
Sbjct: 441 ERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEK 500
Query: 362 XXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXXXXX 421
LMAEDEEGYRKLIDQKKD+RLA+LL QTDEY++NLT
Sbjct: 501 ERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRR 560
Query: 422 XXXXSVKQKLMDTDGKVTLDQ---DETSQLTDMHISVREISSGKVLKGEDAPLAAHLKQW 478
++ + + D DE+SQ++D+ + V +GKVL G +AP A+ L W
Sbjct: 561 RRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAW 620
Query: 479 IQDHPGWEV 487
++ +PG+EV
Sbjct: 621 LEMNPGYEV 629
Score = 275 (101.9 bits), Expect = 0., Sum P(4) = 0.
Identities = 54/98 (55%), Positives = 73/98 (74%)
Query: 1234 DSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDELQKDFKTLCR 1293
+S GR LSE FI+LPSRKELP+YYE+I +P+D KKI RI + KY S+ +L+KD LC
Sbjct: 1417 NSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCH 1476
Query: 1294 NAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
NAQ +N E S I+EDS+VL+SVF ARQ++ E+ ++
Sbjct: 1477 NAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESED 1514
Score = 106 (42.4 bits), Expect = 0., Sum P(4) = 0.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 92 FTSAQVQQLRFQIMAYRLLARNQPLTPQLAMGVQGKR 128
F+ Q+ QLR QI+AY++LAR QPL L + VQGKR
Sbjct: 174 FSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKR 210
Score = 60 (26.2 bits), Expect = 1.3e-291, Sum P(4) = 1.3e-291
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 252 QLRAEVIA---CARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQK 308
QLRA+++A AR ET KRT GL++ + ++ ++QQ+ + +++++Q
Sbjct: 181 QLRAQILAYKMLARGQPLPETLQLAVQGKRTL-PGLQQQQQQQQQQQQQQQQQQQQQQQP 239
Query: 309 HQE 311
Q+
Sbjct: 240 QQQ 242
Score = 60 (26.2 bits), Expect = 9.3e-26, Sum P(3) = 9.3e-26
Identities = 31/135 (22%), Positives = 62/135 (45%)
Query: 1026 MDEKVIQAGMFDQKSTGSERHQ-FLQTIL-HQDDEEDEEENAVPDDETVNQMLARSEEEF 1083
M EK+ + +Q+ ++HQ +L +IL H D ++ + + +++ +A
Sbjct: 428 MTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVA------ 481
Query: 1084 QTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQR 1143
T+ A +EQ K++ IE + L+ EDEE + + K++ + ++
Sbjct: 482 -TWH---ANTEREQKKETERIEKERMRR-LMAEDEEGYRKLIDQKKDRRLAYL------L 530
Query: 1144 KQVD-YTDSLTEKEW 1157
+Q D Y +LT W
Sbjct: 531 QQTDEYVANLTNLVW 545
Score = 55 (24.4 bits), Expect = 0., Sum P(4) = 0.
Identities = 23/92 (25%), Positives = 34/92 (36%)
Query: 50 PQENLTALQRAIDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQQLRFQIMAYRL 109
PQE + + + ID + ++G+ ED MK H + Y +
Sbjct: 66 PQEGMHQMHKPIDGIHDKGIVEDIHCGS---MKGTGMRPPHPGMGPPQSPMDQHSQGY-M 121
Query: 110 LARNQPL-TPQLAMGVQGKRMEGVPSGPQMPP 140
PL P+ V G P+ PQMPP
Sbjct: 122 SPHPSPLGAPE---HVSSPMSGGGPTPPQMPP 150
Score = 55 (24.4 bits), Expect = 1.9e-296, Sum P(4) = 1.9e-296
Identities = 37/158 (23%), Positives = 70/158 (44%)
Query: 192 PKPEGLDPLIILQERENRVALNIERRIEELNG-SLTSTLPEH-LRVKAEIELRALKVLNF 249
P P P++ LQ++++R++ I++ G L E R++A I R ++ N
Sbjct: 310 PAPGQPSPVLQLQQKQSRIS-----PIQKPQGLDPVEILQEREYRLQARIAHRIQELENL 364
Query: 250 QRQLRAEVIACARRDTTLET-AVNVKAYKRTKRQGLKEA-RATEKLEKQQKVEA-ERKKR 306
L ++ R T+E A+ + ++R RQ + R LE +A +R KR
Sbjct: 365 PGSLPPDL----RTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKR 420
Query: 307 QKHQEY-ITTVLQHCKDFKEYHRNNQARIMRLNKAVMN 343
Q +E +T L+ + ++ + Q LN + +
Sbjct: 421 QTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQH 458
Score = 52 (23.4 bits), Expect = 6.3e-25, Sum P(3) = 6.3e-25
Identities = 20/86 (23%), Positives = 44/86 (51%)
Query: 1077 ARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQW-AFEAKEEEKALH 1135
AR E+ + Q+I+ ER++ Q + L + + K+ +E + A + ++ KA+
Sbjct: 426 ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHA----KDFKEYHRSVAGKIQKLSKAVA 481
Query: 1136 MGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+ +R+Q T+ + EKE ++ +
Sbjct: 482 TWHANTEREQKKETERI-EKERMRRL 506
Score = 50 (22.7 bits), Expect = 1.1e-80, Sum P(3) = 1.1e-80
Identities = 23/87 (26%), Positives = 43/87 (49%)
Query: 1050 QTILHQDDEEDEE-ENAVPDDETVNQMLARSEE-EFQTYQRIDAERRKEQGKK--SRLIE 1105
Q I +++ EDE E +DE ++ A+S + + + ++ D R K +GKK +R
Sbjct: 1504 QKIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDDKGRDKGKGKKRPNRGKA 1563
Query: 1106 VSELPDW-LIKEDEEIEQWAFEAKEEE 1131
+ D+ +E +E EQ ++E
Sbjct: 1564 KPVVSDFDSDEEQDEREQSEGSGTDDE 1590
Score = 41 (19.5 bits), Expect = 3.0e-285, Sum P(3) = 3.0e-285
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 62 DSMKEQGLEEDPRYQKLIEMKANR 85
+ M+ E++ Y+KLI+ K +R
Sbjct: 501 ERMRRLMAEDEEGYRKLIDQKKDR 524
Score = 41 (19.5 bits), Expect = 1.4e-104, Sum P(4) = 1.4e-104
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 1037 DQKSTGSERHQFLQTILHQDDEEDEEENAVP---------DDETVNQMLARSEEEFQTYQ 1087
D++ S + + +L + EE E++A DDE Q AR + + T
Sbjct: 646 DEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVA 705
Query: 1088 RIDAERRKEQ 1097
+ER ++Q
Sbjct: 706 HAISERVEKQ 715
Score = 41 (19.5 bits), Expect = 8.5e-24, Sum P(3) = 8.5e-24
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 268 ETAVNVKAYKRTKRQGLKEARATEKLEKQQK 298
E V+ KR +R+ + + A E +EK +K
Sbjct: 1336 EMEEEVRLKKRKRRRNVDKDPAKEDVEKAKK 1366
Score = 41 (19.5 bits), Expect = 8.5e-24, Sum P(3) = 8.5e-24
Identities = 26/128 (20%), Positives = 55/128 (42%)
Query: 191 IPKPEGLDPLIILQERENRV--ALNIERRIEELNGSLTST-------LPEHLRVKAEIEL 241
+P E L+ +I +E E + ++++RR E+ LP + +K + E+
Sbjct: 1233 VPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWI-IKDDAEV 1291
Query: 242 RALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA 301
L + ++ + RRD A+ K + R G E E +++V
Sbjct: 1292 ERLTCEEEEEKIFGRG-SRQRRDVDYSDALTEKQWLRAIEDGNLE-------EMEEEVRL 1343
Query: 302 ERKKRQKH 309
+++KR+++
Sbjct: 1344 KKRKRRRN 1351
Score = 40 (19.1 bits), Expect = 5.3e-80, Sum P(4) = 5.3e-80
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 1283 ELQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+L D K + A +++++ S HE L+++ + E E PD+
Sbjct: 1191 KLNVDQKVI--QAGMFDQKSSS-HERRAFLQAILEHEEENEEEDEVPDD 1236
Score = 39 (18.8 bits), Expect = 2.2e-104, Sum P(4) = 2.2e-104
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 1057 DEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKK 1100
+EEDEEE + ET ++L E + ++ DA++ E K+
Sbjct: 643 EEEDEEEES-SRQETEEKILLDPNSE-EVSEK-DAKQIIETAKQ 683
>UNIPROTKB|J9P5P2 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 OMA:PQEGMHQ EMBL:AAEX03000600 RefSeq:XP_850159.1
Ensembl:ENSCAFT00000046362 GeneID:476335 KEGG:cfa:476335
Uniprot:J9P5P2
Length = 1574
Score = 2466 (873.1 bits), Expect = 0., Sum P(4) = 0.
Identities = 462/634 (72%), Positives = 549/634 (86%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY++AH + E V +Q+++L+NG LK YQ++GLEWMVSL+NNNLNGILADEMGLGKTIQT
Sbjct: 684 SYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQT 743
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IALITYLME K++NGP+LIIVPLSTLSNW+ EF++WAPSV ++YKG+P +R++L Q++
Sbjct: 744 IALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLR 803
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFNVLLTTYEY+IKDK LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP R+LL
Sbjct: 804 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 863
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGE+V+LNEEETILIIRRLH
Sbjct: 864 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLH 923
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVESQLP+KVEY+IKCDMS LQK+LYRHM KGILLTDGSE
Sbjct: 924 KVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGK 983
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGS-GIVSGPDLYRVSGKFELLDRIL 891
LMNTI+QLRK+CNHP+MFQ+IEE F++H+G S G+++G +LYR SGKFELLDRIL
Sbjct: 984 GGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRIL 1043
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL++T HRVLLFCQMT LM I+EDYF++R F Y+RLDGTTK+EDR LLKKFN P S+Y
Sbjct: 1044 PKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQY 1103
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIF+LSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 1104 FIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1163
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDET 1071
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +EE+EEE+ VPDDET
Sbjct: 1164 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEENEEEDEVPDDET 1222
Query: 1072 VNQMLARSEEEFQTYQRIDAERRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEA 1127
+NQM+AR EEEF + R+D +RR+E + K RL+E ELP W+IK+D E+E+ E
Sbjct: 1223 LNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCE- 1281
Query: 1128 KEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+EEEK GRGSRQR+ VDY+D+LTEK+WL+AI
Sbjct: 1282 EEEEKIF--GRGSRQRRDVDYSDALTEKQWLRAI 1313
Score = 769 (275.8 bits), Expect = 0., Sum P(4) = 0.
Identities = 159/309 (51%), Positives = 206/309 (66%)
Query: 182 QIKQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIEL 241
Q KQS+++ I KP+GLDP+ ILQERE R+ I RI+EL +L +LP LR KA +EL
Sbjct: 306 QQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELE-NLPGSLPPDLRTKATVEL 364
Query: 242 RALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA 301
+AL++LNFQRQLR EV+AC RRDTTLETA+N KAYKR+KRQ L+EAR TEKLEKQQK+E
Sbjct: 365 KALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQ 424
Query: 302 ERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXX 361
ERK+RQKHQEY+ ++LQH KDFKEYHR+ +I +L+KAV +HAN
Sbjct: 425 ERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEK 484
Query: 362 XXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXXXXX 421
LMAEDEEGYRKLIDQKKD+RLA+LL QTDEY++NLT
Sbjct: 485 ERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRR 544
Query: 422 XXXXSVKQKLMDTDGKVTLDQ---DETSQLTDMHISVREISSGKVLKGEDAPLAAHLKQW 478
++ + + D DE+SQ++D+ + V +GKVL G +AP A+ L W
Sbjct: 545 RRKKKAEEIAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAW 604
Query: 479 IQDHPGWEV 487
++ +PG+EV
Sbjct: 605 LEMNPGYEV 613
Score = 275 (101.9 bits), Expect = 0., Sum P(4) = 0.
Identities = 54/98 (55%), Positives = 73/98 (74%)
Query: 1234 DSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDELQKDFKTLCR 1293
+S GR LSE FI+LPSRKELP+YYE+I +P+D KKI RI + KY S+ +L+KD LC
Sbjct: 1401 NSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCH 1460
Query: 1294 NAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
NAQ +N E S I+EDS+VL+SVF ARQ++ E+ ++
Sbjct: 1461 NAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESED 1498
Score = 109 (43.4 bits), Expect = 0., Sum P(4) = 0.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 92 FTSAQVQQLRFQIMAYRLLARNQPLTPQLAMGVQGKRMEGVPSGPQMPP 140
F+ Q+ QLR QI+AY++LAR QPL L + VQGKR +P Q P
Sbjct: 174 FSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRT--LPGMQQQQP 220
Score = 60 (26.2 bits), Expect = 4.4e-26, Sum P(3) = 4.4e-26
Identities = 31/135 (22%), Positives = 62/135 (45%)
Query: 1026 MDEKVIQAGMFDQKSTGSERHQ-FLQTIL-HQDDEEDEEENAVPDDETVNQMLARSEEEF 1083
M EK+ + +Q+ ++HQ +L +IL H D ++ + + +++ +A
Sbjct: 412 MTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVA------ 465
Query: 1084 QTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQR 1143
T+ A +EQ K++ IE + L+ EDEE + + K++ + ++
Sbjct: 466 -TWH---ANTEREQKKETERIEKERMRR-LMAEDEEGYRKLIDQKKDRRLAYL------L 514
Query: 1144 KQVD-YTDSLTEKEW 1157
+Q D Y +LT W
Sbjct: 515 QQTDEYVANLTNLVW 529
Score = 59 (25.8 bits), Expect = 0., Sum P(4) = 0.
Identities = 24/92 (26%), Positives = 34/92 (36%)
Query: 50 PQENLTALQRAIDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQQLRFQIMAYRL 109
PQE + + + ID M ++G+ ED MK H + Y +
Sbjct: 66 PQEGMHQMHKPIDGMHDKGIVEDIHCGS---MKGTGMRPPHPGMGPPQSPMDQHSQGY-M 121
Query: 110 LARNQPL-TPQLAMGVQGKRMEGVPSGPQMPP 140
PL P+ V G P+ PQMPP
Sbjct: 122 SPHPSPLGAPE---HVSSPMSGGGPTPPQMPP 150
Score = 56 (24.8 bits), Expect = 7.0e-297, Sum P(4) = 7.0e-297
Identities = 37/158 (23%), Positives = 70/158 (44%)
Query: 192 PKPEGLDPLIILQERENRVALNIERRIEELNG-SLTSTLPEH-LRVKAEIELRALKVLNF 249
P P P++ LQ++++R++ I++ G L E R++A I R ++ N
Sbjct: 294 PAPGQPSPILQLQQKQSRIS-----PIQKPQGLDPVEILQEREYRLQARIAHRIQELENL 348
Query: 250 QRQLRAEVIACARRDTTLET-AVNVKAYKRTKRQGLKEA-RATEKLEKQQKVEA-ERKKR 306
L ++ R T+E A+ + ++R RQ + R LE +A +R KR
Sbjct: 349 PGSLPPDL----RTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKR 404
Query: 307 QKHQEY-ITTVLQHCKDFKEYHRNNQARIMRLNKAVMN 343
Q +E +T L+ + ++ + Q LN + +
Sbjct: 405 QTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQH 442
Score = 52 (23.4 bits), Expect = 2.9e-25, Sum P(3) = 2.9e-25
Identities = 20/86 (23%), Positives = 44/86 (51%)
Query: 1077 ARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQW-AFEAKEEEKALH 1135
AR E+ + Q+I+ ER++ Q + L + + K+ +E + A + ++ KA+
Sbjct: 410 ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHA----KDFKEYHRSVAGKIQKLSKAVA 465
Query: 1136 MGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+ +R+Q T+ + EKE ++ +
Sbjct: 466 TWHANTEREQKKETERI-EKERMRRL 490
Score = 50 (22.7 bits), Expect = 1.2e-80, Sum P(3) = 1.2e-80
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 1050 QTILHQDDEEDEE-ENAVPDDETVNQMLARSEE-EFQTYQRIDAERRKEQGKK 1100
Q I +++ EDE E +DE ++ A+S + + + ++ + R K +GKK
Sbjct: 1488 QKIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKK 1540
Score = 50 (22.7 bits), Expect = 1.2e-80, Sum P(3) = 1.2e-80
Identities = 15/78 (19%), Positives = 41/78 (52%)
Query: 1054 HQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWL 1113
++++EE++EE + + ++V + ++++ + + ++R +GK + VS+
Sbjct: 1501 NEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPV--VSDFDS-- 1556
Query: 1114 IKEDEEIEQWAFEAKEEE 1131
+E +E EQ ++E
Sbjct: 1557 DEEQDENEQSEASGTDDE 1574
Score = 42 (19.8 bits), Expect = 1.2e-104, Sum P(4) = 1.2e-104
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 1057 DEEDEEENAVPDDETVNQMLARSEEE 1082
+EEDEEE + D +L + EE
Sbjct: 627 EEEDEEEESSRQDTEEKILLDPNSEE 652
Score = 41 (19.5 bits), Expect = 3.0e-285, Sum P(3) = 3.0e-285
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 62 DSMKEQGLEEDPRYQKLIEMKANR 85
+ M+ E++ Y+KLI+ K +R
Sbjct: 485 ERMRRLMAEDEEGYRKLIDQKKDR 508
Score = 41 (19.5 bits), Expect = 4.0e-24, Sum P(3) = 4.0e-24
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 268 ETAVNVKAYKRTKRQGLKEARATEKLEKQQK 298
E V+ KR +R+ + + A E +EK +K
Sbjct: 1320 EMEEEVRLKKRKRRRNVDKDPAKEDVEKAKK 1350
Score = 41 (19.5 bits), Expect = 4.0e-24, Sum P(3) = 4.0e-24
Identities = 26/128 (20%), Positives = 55/128 (42%)
Query: 191 IPKPEGLDPLIILQERENRV--ALNIERRIEELNGSLTST-------LPEHLRVKAEIEL 241
+P E L+ +I +E E + ++++RR E+ LP + +K + E+
Sbjct: 1217 VPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWI-IKDDAEV 1275
Query: 242 RALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA 301
L + ++ + RRD A+ K + R G E E +++V
Sbjct: 1276 ERLTCEEEEEKIFGRG-SRQRRDVDYSDALTEKQWLRAIEDGNLE-------EMEEEVRL 1327
Query: 302 ERKKRQKH 309
+++KR+++
Sbjct: 1328 KKRKRRRN 1335
Score = 40 (19.1 bits), Expect = 2.0e-104, Sum P(4) = 2.0e-104
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 1068 DDETVNQMLARSEEEFQTYQRIDAERRKEQ 1097
DDE Q AR + + T +ER ++Q
Sbjct: 670 DDEYSMQYSARGSQSYYTVAHAISERVEKQ 699
Score = 40 (19.1 bits), Expect = 4.8e-80, Sum P(4) = 4.8e-80
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 1283 ELQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+L D K + A +++++ S HE L+++ + E E PD+
Sbjct: 1175 KLNVDQKVI--QAGMFDQKSSS-HERRAFLQAILEHEEENEEEDEVPDD 1220
>UNIPROTKB|F1SJG5 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 OMA:PQEGMHQ GO:GO:0035887
EMBL:CT998562 EMBL:CU062411 Ensembl:ENSSSCT00000005766
Uniprot:F1SJG5
Length = 1556
Score = 2466 (873.1 bits), Expect = 0., Sum P(4) = 0.
Identities = 462/634 (72%), Positives = 549/634 (86%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY++AH + E V +Q+++L+NG LK YQ++GLEWMVSL+NNNLNGILADEMGLGKTIQT
Sbjct: 684 SYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQT 743
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IALITYLME K++NGP+LIIVPLSTLSNW+ EF++WAPSV ++YKG+P +R++L Q++
Sbjct: 744 IALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLR 803
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFNVLLTTYEY+IKDK LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP R+LL
Sbjct: 804 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 863
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGE+V+LNEEETILIIRRLH
Sbjct: 864 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLH 923
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVESQLP+KVEY+IKCDMS LQK+LYRHM KGILLTDGSE
Sbjct: 924 KVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGK 983
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGS-GIVSGPDLYRVSGKFELLDRIL 891
LMNTI+QLRK+CNHP+MFQ+IEE F++H+G S G+++G +LYR SGKFELLDRIL
Sbjct: 984 GGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRIL 1043
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL++T HRVLLFCQMT LM I+EDYF++R F Y+RLDGTTK+EDR LLKKFN P S+Y
Sbjct: 1044 PKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQY 1103
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIF+LSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 1104 FIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1163
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDET 1071
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +EE+EEE+ VPDDET
Sbjct: 1164 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEENEEEDEVPDDET 1222
Query: 1072 VNQMLARSEEEFQTYQRIDAERRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEA 1127
+NQM+AR EEEF + R+D +RR+E + K RL+E ELP W+IK+D E+E+ E
Sbjct: 1223 LNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCE- 1281
Query: 1128 KEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+EEEK GRGSRQR+ VDY+D+LTEK+WL+AI
Sbjct: 1282 EEEEKIF--GRGSRQRRDVDYSDALTEKQWLRAI 1313
Score = 622 (224.0 bits), Expect = 0., Sum P(4) = 0.
Identities = 141/312 (45%), Positives = 191/312 (61%)
Query: 182 QIKQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIEL 241
Q KQS+++ + KP+GLDP+ ILQERE R+ I RI+EL +L +LP LR KA +EL
Sbjct: 305 QQKQSRISPVQKPQGLDPVEILQEREYRLQARIAHRIQELE-NLPGSLPPDLRTKATVEL 363
Query: 242 RALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA 301
+AL++LNFQRQLR EV+AC RRDTTLETA+N KAYKR+KRQ L+EAR TEKLEKQQK+E
Sbjct: 364 KALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQ 423
Query: 302 ERKKRQKHQEYITTVLQHCKDFKEYHRNN--QARIMRLN-KAVMNYHANAXXXXXXXXXX 358
ERK+RQKHQ + + K + +N+ +A + N + + +N
Sbjct: 424 ERKRRQKHQVPGALMGRLPKQATGWSQNHLRKAGFLEQNPRGEGTWKSNLSSKQSNLSDS 483
Query: 359 XXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXX 418
MAEDEEGYRKLIDQKKD+RLA+LL QTDEY++NLT
Sbjct: 484 TEKDRLQ--MAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKK 541
Query: 419 XXXXXXXSVKQKLMDTDGKVTLDQ---DETSQLTDMHISVREISSGKVLKGEDAPLAAHL 475
++ + + D DE+SQ++D+ + V +GKVL G +AP A+ L
Sbjct: 542 KRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQL 601
Query: 476 KQWIQDHPGWEV 487
W++ +PG+EV
Sbjct: 602 DAWLEMNPGYEV 613
Score = 297 (109.6 bits), Expect = 0., Sum P(4) = 0.
Identities = 59/107 (55%), Positives = 78/107 (72%)
Query: 1225 IMRVVIKYTDSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDEL 1284
I+ VI Y DS GR LSE FI+LPSRKELP+YYE+I +P+D KKI RI + KY S+ +L
Sbjct: 1374 IIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDL 1433
Query: 1285 QKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+KD LC NAQ +N E S I+EDS+VL+SVF ARQ++ E+ ++
Sbjct: 1434 EKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESED 1480
Score = 115 (45.5 bits), Expect = 0., Sum P(4) = 0.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 92 FTSAQVQQLRFQIMAYRLLARNQPLTPQLAMGVQGKR-MEGVPSGPQMPPMS 142
F+ Q+ QLR QI+AY++LAR QPL L + VQGKR + G+ Q PP S
Sbjct: 174 FSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQ-QQPPPQS 224
Score = 56 (24.8 bits), Expect = 0., Sum P(4) = 0.
Identities = 23/93 (24%), Positives = 37/93 (39%)
Query: 50 PQENLTALQRAIDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQQLRFQIMAYRL 109
PQE + + + +D M ++G+ ED MK H + Y +
Sbjct: 66 PQEGMHQMHKPMDGMHDKGVVEDIHCGS---MKGTAMRPPHPGMGPPQSPMDQHSQGY-M 121
Query: 110 LARNQPL-TPQ-LAMGVQGKRMEGVPSGPQMPP 140
PL P+ ++ + G G P+ PQMPP
Sbjct: 122 SPHPSPLGAPEHVSSPISG----GGPTPPQMPP 150
Score = 52 (23.4 bits), Expect = 2.1e-299, Sum P(4) = 2.1e-299
Identities = 34/146 (23%), Positives = 66/146 (45%)
Query: 192 PKPEGLDPLIILQERENRVALNIERRIEELNG-SLTSTLPEH-LRVKAEIELRALKVLNF 249
P P P++ LQ++++R++ +++ G L E R++A I R ++ N
Sbjct: 293 PAPGQPSPILQLQQKQSRIS-----PVQKPQGLDPVEILQEREYRLQARIAHRIQELENL 347
Query: 250 QRQLRAEVIACARRDTTLET-AVNVKAYKRTKRQGLKEA-RATEKLEKQQKVEA-ERKKR 306
L ++ R T+E A+ + ++R RQ + R LE +A +R KR
Sbjct: 348 PGSLPPDL----RTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKR 403
Query: 307 QKHQEY-ITTVLQHCKDFKEYHRNNQ 331
Q +E +T L+ + ++ + Q
Sbjct: 404 QTLREARMTEKLEKQQKIEQERKRRQ 429
Score = 50 (22.7 bits), Expect = 8.9e-64, Sum P(3) = 8.9e-64
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 1050 QTILHQDDEEDEE-ENAVPDDETVNQMLARSEE-EFQTYQRIDAERRKEQGKK 1100
Q I +++ EDE E +DE ++ A+S + + + ++ + R K +GKK
Sbjct: 1470 QKIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKK 1522
Score = 50 (22.7 bits), Expect = 8.9e-64, Sum P(3) = 8.9e-64
Identities = 15/78 (19%), Positives = 41/78 (52%)
Query: 1054 HQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWL 1113
++++EE++EE + + ++V + ++++ + + ++R +GK + VS+
Sbjct: 1483 NEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPV--VSDFDS-- 1538
Query: 1114 IKEDEEIEQWAFEAKEEE 1131
+E +E EQ ++E
Sbjct: 1539 DEEQDENEQSEASGTDDE 1556
Score = 48 (22.0 bits), Expect = 7.7e-28, Sum P(3) = 7.7e-28
Identities = 19/83 (22%), Positives = 38/83 (45%)
Query: 1077 ARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHM 1136
AR E+ + Q+I+ ER++ Q + + LP + + A ++ +
Sbjct: 409 ARMTEKLEKQQKIEQERKRRQKHQVPGALMGRLPKQATGWSQNHLRKAGFLEQNPRGEGT 468
Query: 1137 GRGSRQRKQVDYTDSLTEKEWLK 1159
+ + KQ + +DS TEK+ L+
Sbjct: 469 WKSNLSSKQSNLSDS-TEKDRLQ 490
Score = 45 (20.9 bits), Expect = 5.4e-288, Sum P(3) = 5.4e-288
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 51 QENLTALQRAI-DSMKEQGL---EEDPRYQKLIEMKANR 85
+ NL++ Q + DS ++ L E++ Y+KLI+ K +R
Sbjct: 470 KSNLSSKQSNLSDSTEKDRLQMAEDEEGYRKLIDQKKDR 508
Score = 41 (19.5 bits), Expect = 2.8e-89, Sum P(4) = 2.8e-89
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 1037 DQKSTGSERHQFLQTILHQDDEEDEEENAVP---------DDETVNQMLARSEEEFQTYQ 1087
D++ S + + +L + EE E++A DDE Q AR + + T
Sbjct: 630 DEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVA 689
Query: 1088 RIDAERRKEQ 1097
+ER ++Q
Sbjct: 690 HAISERVEKQ 699
Score = 41 (19.5 bits), Expect = 4.1e-27, Sum P(3) = 4.1e-27
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 268 ETAVNVKAYKRTKRQGLKEARATEKLEKQQK 298
E V+ KR +R+ + + A E +EK +K
Sbjct: 1320 EMEEEVRLKKRKRRRNVDKDPAKEDVEKAKK 1350
Score = 41 (19.5 bits), Expect = 4.1e-27, Sum P(3) = 4.1e-27
Identities = 26/128 (20%), Positives = 55/128 (42%)
Query: 191 IPKPEGLDPLIILQERENRV--ALNIERRIEELNGSLTST-------LPEHLRVKAEIEL 241
+P E L+ +I +E E + ++++RR E+ LP + +K + E+
Sbjct: 1217 VPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWI-IKDDAEV 1275
Query: 242 RALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA 301
L + ++ + RRD A+ K + R G E E +++V
Sbjct: 1276 ERLTCEEEEEKIFGRG-SRQRRDVDYSDALTEKQWLRAIEDGNLE-------EMEEEVRL 1327
Query: 302 ERKKRQKH 309
+++KR+++
Sbjct: 1328 KKRKRRRN 1335
Score = 40 (19.1 bits), Expect = 1.9e-62, Sum P(4) = 1.9e-62
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 1283 ELQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+L D K + A +++++ S HE L+++ + E E PD+
Sbjct: 1175 KLNVDQKVI--QAGMFDQKSSS-HERRAFLQAILEHEEENEEEDEVPDD 1220
Score = 39 (18.8 bits), Expect = 4.6e-89, Sum P(4) = 4.6e-89
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 1057 DEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKK 1100
+EEDEEE + ET ++L E + ++ DA++ E K+
Sbjct: 627 EEEDEEEES-SRQETEEKILLDPNSE-EVSEK-DAKQIIETAKQ 667
Score = 38 (18.4 bits), Expect = 2.5e-27, Sum P(4) = 2.5e-27
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 1099 KKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVD-YTDSLTEKEW 1157
K+S L + +E + EDEE + + K++ + ++ +Q D Y +LT W
Sbjct: 476 KQSNLSDSTEKDRLQMAEDEEGYRKLIDQKKDRRLAYL------LQQTDEYVANLTNLVW 529
>UNIPROTKB|D4A4J2 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
Pfam:PF08880 PROSITE:PS51194 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
IPI:IPI00777186 Ensembl:ENSRNOT00000016283 ArrayExpress:D4A4J2
Uniprot:D4A4J2
Length = 1506
Score = 2466 (873.1 bits), Expect = 0., Sum P(3) = 0.
Identities = 462/634 (72%), Positives = 549/634 (86%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY++AH + E V +Q+++L+NG LK YQ++GLEWMVSL+NNNLNGILADEMGLGKTIQT
Sbjct: 707 SYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQT 766
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IALITYLME K++NGP+LIIVPLSTLSNW+ EF++WAPSV ++YKG+P +R++L Q++
Sbjct: 767 IALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLR 826
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFNVLLTTYEY+IKDK LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP R+LL
Sbjct: 827 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 886
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGE+V+LNEEETILIIRRLH
Sbjct: 887 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLH 946
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVESQLP+KVEY+IKCDMS LQK+LYRHM KGILLTDGSE
Sbjct: 947 KVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGK 1006
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGS-GIVSGPDLYRVSGKFELLDRIL 891
LMNTI+QLRK+CNHP+MFQ+IEE F++H+G S G+++G +LYR SGKFELLDRIL
Sbjct: 1007 GGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRIL 1066
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL++T HRVLLFCQMT LM I+EDYF++R F Y+RLDGTTK+EDR LLKKFN P S+Y
Sbjct: 1067 PKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQY 1126
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIF+LSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 1127 FIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1186
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDET 1071
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +EE+EEE+ VPDDET
Sbjct: 1187 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEENEEEDEVPDDET 1245
Query: 1072 VNQMLARSEEEFQTYQRIDAERRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEA 1127
+NQM+AR EEEF + R+D +RR+E + K RL+E ELP W+IK+D E+E+ E
Sbjct: 1246 LNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCE- 1304
Query: 1128 KEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+EEEK GRGSRQR+ VDY+D+LTEK+WL+AI
Sbjct: 1305 EEEEKIF--GRGSRQRRDVDYSDALTEKQWLRAI 1336
Score = 773 (277.2 bits), Expect = 0., Sum P(3) = 0.
Identities = 160/309 (51%), Positives = 206/309 (66%)
Query: 182 QIKQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIEL 241
Q KQS+++ I KP+GLDP+ ILQERE R+ I RI+EL SL +LP LR KA +EL
Sbjct: 329 QQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELE-SLPGSLPPDLRTKATVEL 387
Query: 242 RALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA 301
+AL++LNFQRQLR EV+AC RRDTTLETA+N KAYKR+KRQ L+EAR TEKLEKQQK+E
Sbjct: 388 KALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQ 447
Query: 302 ERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXX 361
ERK+RQKHQEY+ ++LQH KDFKEYHR+ +I +L+KAV +HAN
Sbjct: 448 ERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEK 507
Query: 362 XXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXXXXX 421
LMAEDEEGYRKLIDQKKD+RLA+LL QTDEY++NLT
Sbjct: 508 ERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRR 567
Query: 422 XXXXSVKQKLMDTDGKVTLDQ---DETSQLTDMHISVREISSGKVLKGEDAPLAAHLKQW 478
++ + + D DE+SQ++D+ + V +GKVL G +AP A+ L W
Sbjct: 568 RRRKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAW 627
Query: 479 IQDHPGWEV 487
++ +PG+EV
Sbjct: 628 LEMNPGYEV 636
Score = 106 (42.4 bits), Expect = 0., Sum P(3) = 0.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 92 FTSAQVQQLRFQIMAYRLLARNQPLTPQLAMGVQGKR 128
F+ Q+ QLR QI+AY++LAR QPL L + VQGKR
Sbjct: 174 FSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKR 210
Score = 58 (25.5 bits), Expect = 0., Sum P(3) = 0.
Identities = 24/93 (25%), Positives = 37/93 (39%)
Query: 50 PQENLTALQRAIDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQQLRFQIMAYRL 109
PQE L L + +D + ++G+ ED MK H + Y +
Sbjct: 66 PQEGLHQLHKPMDGIHDKGIVEDVHCGS---MKGTSMRPPHPGMGPPQSPMDQHSQGY-M 121
Query: 110 LARNQPL-TPQ-LAMGVQGKRMEGVPSGPQMPP 140
PL P+ ++ + G G P+ PQMPP
Sbjct: 122 SPHPSPLGAPEHVSSPISG----GGPTPPQMPP 150
Score = 50 (22.7 bits), Expect = 2.4e-268, Sum P(3) = 2.4e-268
Identities = 36/158 (22%), Positives = 70/158 (44%)
Query: 192 PKPEGLDPLIILQERENRVALNIERRIEELNG-SLTSTLPEH-LRVKAEIELRALKVLNF 249
P P P++ LQ++++R++ I++ G L E R++A I R ++ +
Sbjct: 317 PAPGQPSPVLQLQQKQSRIS-----PIQKPQGLDPVEILQEREYRLQARIAHRIQELESL 371
Query: 250 QRQLRAEVIACARRDTTLET-AVNVKAYKRTKRQGLKEA-RATEKLEKQQKVEA-ERKKR 306
L ++ R T+E A+ + ++R RQ + R LE +A +R KR
Sbjct: 372 PGSLPPDL----RTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKR 427
Query: 307 QKHQEY-ITTVLQHCKDFKEYHRNNQARIMRLNKAVMN 343
Q +E +T L+ + ++ + Q LN + +
Sbjct: 428 QTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQH 465
Score = 41 (19.5 bits), Expect = 4.9e-258, Sum P(2) = 4.9e-258
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 62 DSMKEQGLEEDPRYQKLIEMKANR 85
+ M+ E++ Y+KLI+ K +R
Sbjct: 508 ERMRRLMAEDEEGYRKLIDQKKDR 531
Score = 41 (19.5 bits), Expect = 2.0e-80, Sum P(4) = 2.0e-80
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 1037 DQKSTGSERHQFLQTILHQDDEEDEEENAVP---------DDETVNQMLARSEEEFQTYQ 1087
D++ S + + +L + EE E++A DDE Q AR + + T
Sbjct: 653 DEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVA 712
Query: 1088 RIDAERRKEQ 1097
+ER ++Q
Sbjct: 713 HAISERVEKQ 722
Score = 40 (19.1 bits), Expect = 3.2e-262, Sum P(3) = 3.2e-262
Identities = 12/72 (16%), Positives = 36/72 (50%)
Query: 240 ELRALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKV 299
++ A K+L + L + + TL + ++ ++Q ++ + + + QQ+
Sbjct: 185 QILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQPQQPQQPQQQT 244
Query: 300 EAERKKRQKHQE 311
+A+ +++Q+ Q+
Sbjct: 245 QAQPQQQQQQQQ 256
Score = 40 (19.1 bits), Expect = 2.0e-80, Sum P(4) = 2.0e-80
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 1283 ELQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+L D K + A +++++ S HE L+++ + E E PD+
Sbjct: 1198 KLNVDQKVI--QAGMFDQKSSS-HERRAFLQAILEHEEENEEEDEVPDD 1243
Score = 39 (18.8 bits), Expect = 3.2e-80, Sum P(4) = 3.2e-80
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 1057 DEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKK 1100
+EEDEEE + ET ++L E + ++ DA++ E K+
Sbjct: 650 EEEDEEEES-SRQETEEKILLDPNSE-EVSEK-DAKQIIETAKQ 690
>RGD|1302988 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=ISO] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045111 "intermediate filament cytoskeleton" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO] [GO:0071565 "nBAF
complex" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OrthoDB:EOG418BMJ IPI:IPI00464435 EMBL:AY643746
RefSeq:NP_001004446.1 UniGene:Rn.94939 ProteinModelPortal:Q6DUH4
SMR:Q6DUH4 STRING:Q6DUH4 GeneID:361745 KEGG:rno:361745
UCSC:RGD:1302988 InParanoid:Q6DUH4 NextBio:677480
Genevestigator:Q6DUH4 Uniprot:Q6DUH4
Length = 1597
Score = 2447 (866.4 bits), Expect = 0., Sum P(4) = 0.
Identities = 459/634 (72%), Positives = 545/634 (85%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY++AH + E V +Q+++L+NG LK YQ++GLEWMVSL+NNNLNGILADEMG GKTIQT
Sbjct: 707 SYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGPGKTIQT 766
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IALITYLME K +NGP+LIIVPLSTLSNW+ EF++WAPS ++YKG+P +R++L Q++
Sbjct: 767 IALITYLMEHKGLNGPYLIIVPLSTLSNWTYEFDKWAPSAVKISYKGTPAMRRSLVPQLR 826
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFN LLTTYEY+IKDK LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP R+LL
Sbjct: 827 SGKFNALLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 886
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGE+V+LNEEETILIIRRLH
Sbjct: 887 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLH 946
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVESQLP+KVEY+IKCDMS LQK+LYRHM KGILLTDGSE
Sbjct: 947 KVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGK 1006
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGS-GIVSGPDLYRVSGKFELLDRIL 891
LMNTI+QLRK+CNHP+MFQ+IEE F++H+G S G+++G +LYR SGKFELLDRIL
Sbjct: 1007 GGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRIL 1066
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL++T HRVLLFCQMT LM I+EDYF++R F Y+RLDGTTK+EDR LLKKFN P S+Y
Sbjct: 1067 PKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQY 1126
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIF+LSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 1127 FIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1186
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDET 1071
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +EE+EEE+ VPDDET
Sbjct: 1187 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEENEEEDEVPDDET 1245
Query: 1072 VNQMLARSEEEFQTYQRIDAERRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEA 1127
+NQM+AR EEEF + R+D +RR+E + K RL+E ELP W+IK+D E+E+ E
Sbjct: 1246 LNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCE- 1304
Query: 1128 KEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+EEEK GRGSRQR+ VDY+D+LTEK+WL+AI
Sbjct: 1305 EEEEKIF--GRGSRQRRDVDYSDALTEKQWLRAI 1336
Score = 773 (277.2 bits), Expect = 0., Sum P(4) = 0.
Identities = 160/309 (51%), Positives = 206/309 (66%)
Query: 182 QIKQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIEL 241
Q KQS+++ I KP+GLDP+ ILQERE R+ I RI+EL SL +LP LR KA +EL
Sbjct: 329 QQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELE-SLPGSLPPDLRTKATVEL 387
Query: 242 RALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA 301
+AL++LNFQRQLR EV+AC RRDTTLETA+N KAYKR+KRQ L+EAR TEKLEKQQK+E
Sbjct: 388 KALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQ 447
Query: 302 ERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXX 361
ERK+RQKHQEY+ ++LQH KDFKEYHR+ +I +L+KAV +HAN
Sbjct: 448 ERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEK 507
Query: 362 XXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXXXXX 421
LMAEDEEGYRKLIDQKKD+RLA+LL QTDEY++NLT
Sbjct: 508 ERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRR 567
Query: 422 XXXXSVKQKLMDTDGKVTLDQ---DETSQLTDMHISVREISSGKVLKGEDAPLAAHLKQW 478
++ + + D DE+SQ++D+ + V +GKVL G +AP A+ L W
Sbjct: 568 RRRKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAW 627
Query: 479 IQDHPGWEV 487
++ +PG+EV
Sbjct: 628 LEMNPGYEV 636
Score = 278 (102.9 bits), Expect = 0., Sum P(4) = 0.
Identities = 55/98 (56%), Positives = 73/98 (74%)
Query: 1234 DSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDELQKDFKTLCR 1293
+S GR LSE FI+LPSRKELP+YYE+I +P+D KKI RI + KY S+ +L+KD LC
Sbjct: 1424 NSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCH 1483
Query: 1294 NAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
NAQ +N E S I+EDS+VL+SVF ARQ++ E+ +E
Sbjct: 1484 NAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEE 1521
Score = 108 (43.1 bits), Expect = 0., Sum P(4) = 0.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 92 FTSAQVQQLRFQIMAYRLLARNQPLTPQLAMGVQGKR-MEGVPSGPQ 137
F+ Q+ QLR QI+AY++LAR QPL L + VQGKR + G+ Q
Sbjct: 174 FSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGIQQQQQ 220
Score = 60 (26.2 bits), Expect = 2.8e-26, Sum P(3) = 2.8e-26
Identities = 31/135 (22%), Positives = 62/135 (45%)
Query: 1026 MDEKVIQAGMFDQKSTGSERHQ-FLQTIL-HQDDEEDEEENAVPDDETVNQMLARSEEEF 1083
M EK+ + +Q+ ++HQ +L +IL H D ++ + + +++ +A
Sbjct: 435 MTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVA------ 488
Query: 1084 QTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQR 1143
T+ A +EQ K++ IE + L+ EDEE + + K++ + ++
Sbjct: 489 -TWH---ANTEREQKKETERIEKERMRR-LMAEDEEGYRKLIDQKKDRRLAYL------L 537
Query: 1144 KQVD-YTDSLTEKEW 1157
+Q D Y +LT W
Sbjct: 538 QQTDEYVANLTNLVW 552
Score = 55 (24.4 bits), Expect = 9.3e-26, Sum P(3) = 9.3e-26
Identities = 35/177 (19%), Positives = 80/177 (45%)
Query: 989 QDRAHRIGQKNEVRVL-RLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQ 1047
Q+R +R+ + R+ R+ + S+ + R K ++ K ++ F + + Q
Sbjct: 351 QEREYRL----QARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQR-----QLRQ 401
Query: 1048 FLQTILHQDDEEDEEENAVPDDETVNQML--ARSEEEFQTYQRIDAERRKEQGKKSRLIE 1105
+ + +D + N+ + Q L AR E+ + Q+I+ ER++ Q + L
Sbjct: 402 EVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNS 461
Query: 1106 VSELPDWLIKEDEEIEQW-AFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+ + K+ +E + A + ++ KA+ + +R+Q T+ + EKE ++ +
Sbjct: 462 ILQHA----KDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERI-EKERMRRL 513
Score = 52 (23.4 bits), Expect = 0., Sum P(4) = 0.
Identities = 23/93 (24%), Positives = 36/93 (38%)
Query: 50 PQENLTALQRAIDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQQLRFQIMAYRL 109
PQE L L + +D + ++G+ E MK H + Y +
Sbjct: 66 PQEGLHQLHKPMDGIHDKGIVEGVHCGS---MKGTSMRPPHPGVGPPQSPMDQHSQGY-M 121
Query: 110 LARNQPL-TPQ-LAMGVQGKRMEGVPSGPQMPP 140
PL P+ ++ + G G P+ PQMPP
Sbjct: 122 SPHPSPLGAPEHVSSPISG----GGPTPPQMPP 150
Score = 50 (22.7 bits), Expect = 1.9e-294, Sum P(4) = 1.9e-294
Identities = 36/158 (22%), Positives = 70/158 (44%)
Query: 192 PKPEGLDPLIILQERENRVALNIERRIEELNG-SLTSTLPEH-LRVKAEIELRALKVLNF 249
P P P++ LQ++++R++ I++ G L E R++A I R ++ +
Sbjct: 317 PAPGQPSPVLQLQQKQSRIS-----PIQKPQGLDPVEILQEREYRLQARIAHRIQELESL 371
Query: 250 QRQLRAEVIACARRDTTLET-AVNVKAYKRTKRQGLKEA-RATEKLEKQQKVEA-ERKKR 306
L ++ R T+E A+ + ++R RQ + R LE +A +R KR
Sbjct: 372 PGSLPPDL----RTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKR 427
Query: 307 QKHQEY-ITTVLQHCKDFKEYHRNNQARIMRLNKAVMN 343
Q +E +T L+ + ++ + Q LN + +
Sbjct: 428 QTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQH 465
Score = 50 (22.7 bits), Expect = 5.0e-81, Sum P(3) = 5.0e-81
Identities = 16/78 (20%), Positives = 40/78 (51%)
Query: 1054 HQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWL 1113
++++EE++EE + + ++V + +++E + ++R +GK + VS+
Sbjct: 1524 NEEEEEEDEEESEAEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPV--VSDFDS-- 1579
Query: 1114 IKEDEEIEQWAFEAKEEE 1131
+E +E EQ ++E
Sbjct: 1580 DEEQDENEQSEASGTDDE 1597
Score = 44 (20.5 bits), Expect = 6.6e-288, Sum P(4) = 6.6e-288
Identities = 13/80 (16%), Positives = 40/80 (50%)
Query: 240 ELRALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKV 299
++ A K+L + L + + TL + ++ ++Q ++ + + + QQ+
Sbjct: 185 QILAYKMLARGQPLPETLQLAVQGKRTLPGIQQQQQQQQQQQQQQQQQQPQQPQQPQQQT 244
Query: 300 EAERKKRQKHQEYITTVLQH 319
+A+ +++Q+ Q+ T++ +
Sbjct: 245 QAQPQQQQQQQQQPPTLVSY 264
Score = 44 (20.5 bits), Expect = 2.1e-80, Sum P(3) = 2.1e-80
Identities = 12/44 (27%), Positives = 26/44 (59%)
Query: 1057 DEEDEEENAVPDDETVNQMLARSEEEFQTYQ-RIDAERRKEQGK 1099
+EE EEE+ ++E + SE E ++ + +I +++E+G+
Sbjct: 1516 EEESEEESNEEEEEEDEE---ESEAEAKSVKVKIKLNKKEEKGR 1556
Score = 41 (19.5 bits), Expect = 1.5e-283, Sum P(3) = 1.5e-283
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 62 DSMKEQGLEEDPRYQKLIEMKANR 85
+ M+ E++ Y+KLI+ K +R
Sbjct: 508 ERMRRLMAEDEEGYRKLIDQKKDR 531
Score = 41 (19.5 bits), Expect = 4.4e-80, Sum P(3) = 4.4e-80
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 1055 QDDEEDEEENAVPDDETVNQMLARSEE-EFQTYQRIDAERRKEQGKK 1100
++ EE+ E +DE ++ A+S + + + ++ + R +GKK
Sbjct: 1517 EESEEESNEEEEEEDEEESEAEAKSVKVKIKLNKKEEKGRDTGKGKK 1563
Score = 41 (19.5 bits), Expect = 2.6e-24, Sum P(3) = 2.6e-24
Identities = 26/128 (20%), Positives = 55/128 (42%)
Query: 191 IPKPEGLDPLIILQERENRV--ALNIERRIEELNGSLTST-------LPEHLRVKAEIEL 241
+P E L+ +I +E E + ++++RR E+ LP + +K + E+
Sbjct: 1240 VPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWI-IKDDAEV 1298
Query: 242 RALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA 301
L + ++ + RRD A+ K + R G E E +++V
Sbjct: 1299 ERLTCEEEEEKIFGRG-SRQRRDVDYSDALTEKQWLRAIEDGNLE-------EMEEEVRL 1350
Query: 302 ERKKRQKH 309
+++KR+++
Sbjct: 1351 KKRKRRRN 1358
Score = 40 (19.1 bits), Expect = 4.0e-105, Sum P(4) = 4.0e-105
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 1068 DDETVNQMLARSEEEFQTYQRIDAERRKEQ 1097
DDE Q AR + + T +ER ++Q
Sbjct: 693 DDEYSMQYSARGSQSYYTVAHAISERVEKQ 722
Score = 40 (19.1 bits), Expect = 3.2e-80, Sum P(4) = 3.2e-80
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 1283 ELQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+L D K + A +++++ S HE L+++ + E E PD+
Sbjct: 1198 KLNVDQKVI--QAGMFDQKSSS-HERRAFLQAILEHEEENEEEDEVPDD 1243
Score = 39 (18.8 bits), Expect = 0., Sum P(4) = 0.
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 1114 IKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKE 1156
I ++EE E+ E+ EEE+ + K V L +KE
Sbjct: 1513 IAKEEESEE---ESNEEEEEEDEEESEAEAKSVKVKIKLNKKE 1552
Score = 37 (18.1 bits), Expect = 6.7e-24, Sum P(3) = 6.7e-24
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 268 ETAVNVKAYKRTKRQGLKEARATEKLEKQQK 298
E V+ KR +R+ + + E +EK +K
Sbjct: 1343 EMEEEVRLKKRKRRRNVDKDPVKEDVEKAKK 1373
>ZFIN|ZDB-GENE-030131-5964 [details] [associations]
symbol:smarca2 "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily a,
member 2" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 ZFIN:ZDB-GENE-030131-5964 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595
HOVERGEN:HBG056636 EMBL:BC060676 IPI:IPI00483012 RefSeq:NP_997881.1
UniGene:Dr.93531 ProteinModelPortal:Q6P9P2 SMR:Q6P9P2 STRING:Q6P9P2
GeneID:334032 KEGG:dre:334032 InParanoid:Q6P9P2 NextBio:20810237
ArrayExpress:Q6P9P2 Uniprot:Q6P9P2
Length = 1568
Score = 2446 (866.1 bits), Expect = 0., Sum P(4) = 0.
Identities = 461/634 (72%), Positives = 544/634 (85%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY +AH V E V +Q++ L+NG LK+YQI+GLEWMVSL+NNNLNGILADEMGLGKTIQT
Sbjct: 702 SYYGVAHAVIERVDKQSTFLINGTLKQYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQT 761
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
I LITYLME K++NGP+LIIVPLSTLSNW E ++WAPS+ +AYKG+P +R++L Q++
Sbjct: 762 IGLITYLMELKRLNGPYLIIVPLSTLSNWVYELDKWAPSIVKIAYKGTPSMRRSLVPQLR 821
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFNVL+TTYEY+IKDK LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP RLLL
Sbjct: 822 SGKFNVLITTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 881
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGE+V+LNEEETILIIRRLH
Sbjct: 882 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLH 941
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVESQLP+KVEY+IKCDMS +QKVLYRHM KGILLTDGSE
Sbjct: 942 KVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQGKGILLTDGSEKDKKGK 1001
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVG-GSGIVSGPDLYRVSGKFELLDRIL 891
LMNTI+QL+K+CNHP+MFQ+IEE F++H+G +GI+SGPDLYR SGKFELLDRIL
Sbjct: 1002 GGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGFPNGIISGPDLYRASGKFELLDRIL 1061
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKLK+T HRVLLFCQMT LM ILEDYF YR F Y+RLDGTTK+EDR LLKKFN S+Y
Sbjct: 1062 PKLKATNHRVLLFCQMTSLMTILEDYFGYRNFLYLRLDGTTKSEDRAMLLKKFNEEGSQY 1121
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIF+LSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 1122 FIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1181
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDET 1071
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +E++ EE+ VPDDET
Sbjct: 1182 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEQNMEEDEVPDDET 1240
Query: 1072 VNQMLARSEEEFQTYQRIDAERRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEA 1127
+NQM+AR+E+EF+ + R+D +RR+E + K RL+E ELP W++K+D E+E+ E
Sbjct: 1241 LNQMIARNEDEFELFMRMDLDRRREDARNPKRKPRLMEEDELPSWILKDDAEVERLTCE- 1299
Query: 1128 KEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+EEEK GRGSR R+ VDY+D+LTEK+WL+AI
Sbjct: 1300 EEEEKIF--GRGSRHRRDVDYSDALTEKQWLRAI 1331
Score = 765 (274.4 bits), Expect = 0., Sum P(4) = 0.
Identities = 157/314 (50%), Positives = 209/314 (66%)
Query: 179 ISSQIKQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAE 238
I Q KQ+++ I KP+GLDP+ +LQERE R+ I RI+EL +L +LP LR KA
Sbjct: 322 IQLQQKQNRVIPIQKPQGLDPVELLQEREYRLQARIAHRIQELE-NLPGSLPPDLRTKAT 380
Query: 239 IELRALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQK 298
+EL+AL++LNFQRQLR +V+AC RRDTTLETA+N KAYKR+KRQ L+EAR TEKLEKQQK
Sbjct: 381 VELKALRLLNFQRQLRLDVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQK 440
Query: 299 VEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXX 358
+E ERK+RQKHQEY+ ++LQH KDFKEYHR+ +I +L+KA+ +H N
Sbjct: 441 IEQERKRRQKHQEYLNSILQHAKDFKEYHRSISGKIQKLSKAIATWHTNTEREQKKETER 500
Query: 359 XXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXX 418
LMAEDEEGYRKLIDQKKDKRLA+LL QTDEY++NLT
Sbjct: 501 IEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVYEHKAAQAAKEKK 560
Query: 419 XXXXXXXSVKQKLMDTDGKVTLDQD-----ETSQLTDMHISVREISSGKVLKGEDAPLAA 473
K++ D +G + D E SQ++++ + V + +GKVL+G DAP ++
Sbjct: 561 KKRKKK---KKEAGDAEGMGAIGPDGEPIDENSQMSELPVKVIQTETGKVLQGTDAPKSS 617
Query: 474 HLKQWIQDHPGWEV 487
L+ W++ +PG+EV
Sbjct: 618 QLEAWLEMNPGYEV 631
Score = 300 (110.7 bits), Expect = 0., Sum P(4) = 0.
Identities = 60/107 (56%), Positives = 75/107 (70%)
Query: 1225 IMRVVIKYTDSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDEL 1284
I+ VI Y D GR LSE F++LPSRKELP+YYE+I +P+D KKI R+ KY SV +L
Sbjct: 1392 IVDTVINYRDISGRQLSEVFVQLPSRKELPEYYELIRKPVDFKKIKERVRSHKYRSVSDL 1451
Query: 1285 QKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+KD LC NAQ YN E S I+EDS+VL+SVF ARQ++ E DE
Sbjct: 1452 EKDVMLLCHNAQTYNLEGSQIYEDSIVLQSVFKSARQKIAREESDDE 1498
Score = 118 (46.6 bits), Expect = 0., Sum P(4) = 0.
Identities = 25/49 (51%), Positives = 33/49 (67%)
Query: 91 AFTSAQVQQLRFQIMAYRLLARNQPLTPQLAMGVQGKRMEGVPSGPQMP 139
AF+ Q+QQLR QI+AY++L R QPL L + VQGKR +P+ Q P
Sbjct: 173 AFSPVQLQQLRAQILAYKILGRGQPLPENLQLAVQGKR--SLPTMQQQP 219
Score = 52 (23.4 bits), Expect = 2.7e-81, Sum P(3) = 2.7e-81
Identities = 24/127 (18%), Positives = 57/127 (44%)
Query: 998 KNEVRVLRLMTVNSVEERILA----AARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTIL 1053
K VR + +V+ +E+ ++ A Y L ++ + + Q S R + +
Sbjct: 1437 KERVRSHKYRSVSDLEKDVMLLCHNAQTYNLE-GSQIYEDSIVLQSVFKSARQKIAREES 1495
Query: 1054 HQD-DEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDW 1112
+ D++DEE+ + + ++V + S+ + + + +RR +GK ++ + +
Sbjct: 1496 DDESDDDDEEDESEEESKSVKVKIKLSKRDERGQDK--GKRRPSRGKAKPVVSDDDSDE- 1552
Query: 1113 LIKEDEE 1119
+ED E
Sbjct: 1553 -DQEDNE 1558
Score = 49 (22.3 bits), Expect = 1.5e-28, Sum P(3) = 1.5e-28
Identities = 20/87 (22%), Positives = 44/87 (50%)
Query: 1077 ARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEE--KAL 1134
AR E+ + Q+I+ ER++ Q + L + + K+ +E + + K ++ KA+
Sbjct: 429 ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHA----KDFKEYHR-SISGKIQKLSKAI 483
Query: 1135 HMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+ +R+Q T+ + EKE ++ +
Sbjct: 484 ATWHTNTEREQKKETERI-EKERMRRL 509
Score = 46 (21.3 bits), Expect = 1.2e-80, Sum P(3) = 1.2e-80
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 1283 ELQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+L D K + A +++++ S HE L+++ Q +E E PD+
Sbjct: 1193 KLNVDQKVI--QAGMFDQKSSS-HERRAFLQAILEHEEQNMEEDEVPDD 1238
Score = 46 (21.3 bits), Expect = 3.0e-28, Sum P(3) = 3.0e-28
Identities = 29/126 (23%), Positives = 53/126 (42%)
Query: 191 IPKPEGLDPLIILQERENRV--ALNIERRIEEL-NGSLTSTLPEHLRVKAEIELRALKVL 247
+P E L+ +I E E + ++++RR E+ N L E + + I +V
Sbjct: 1235 VPDDETLNQMIARNEDEFELFMRMDLDRRREDARNPKRKPRLMEEDELPSWILKDDAEVE 1294
Query: 248 NFQRQLRAEVI----ACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAER 303
+ E I + RRD A+ K + R G E E ++++ +R
Sbjct: 1295 RLTCEEEEEKIFGRGSRHRRDVDYSDALTEKQWLRAIEDGNLE-------EIEEEIRLKR 1347
Query: 304 KKRQKH 309
+KR++H
Sbjct: 1348 RKRRRH 1353
Score = 38 (18.4 bits), Expect = 1.8e-285, Sum P(3) = 1.8e-285
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 62 DSMKEQGLEEDPRYQKLIEMKANR 85
+ M+ E++ Y+KLI+ K ++
Sbjct: 504 ERMRRLMAEDEEGYRKLIDQKKDK 527
Score = 37 (18.1 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 56 ALQRAIDSMKEQGLEED--PRYQKLIEMKA-NRTEIK 89
A +AI +EQ +EED P + L +M A N E +
Sbjct: 1217 AFLQAILEHEEQNMEEDEVPDDETLNQMIARNEDEFE 1253
>UNIPROTKB|P51532 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0071564 "npBAF complex" evidence=ISS;IDA]
[GO:0071565 "nBAF complex" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=IC;IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0071778 "WINAC complex"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=IMP] [GO:0050681 "androgen receptor binding"
evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IGI] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=TAS] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0002039 "p53 binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0003713 "transcription
coactivator activity" evidence=IMP;NAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0043923
"positive regulation by host of viral transcription" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=IPI] [GO:0003407 "neural
retina development" evidence=IEP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0003714 GO:GO:0007399
GO:GO:0051091 GO:GO:0030308 GO:GO:0003677 GO:GO:0006338
GO:GO:0000122 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0003407 GO:GO:0071565 GO:GO:0004386 EMBL:CH471106
GO:GO:0001105 GO:GO:0045749 Orphanet:1465 GO:GO:0006337
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071778 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:AC011442 GO:GO:0008094 GO:GO:0060766
GO:GO:0043923 EMBL:AC011485 HOGENOM:HOG000172363 HOVERGEN:HBG056636
CTD:6597 EMBL:U29175 EMBL:D26156 EMBL:AF254822 EMBL:EU430756
EMBL:EU430757 EMBL:EU430758 EMBL:EU430759 EMBL:AC006127
IPI:IPI00293426 IPI:IPI00900285 IPI:IPI00900328 IPI:IPI00900338
IPI:IPI01016040 PIR:S45252 RefSeq:NP_001122316.1
RefSeq:NP_001122317.1 RefSeq:NP_001122318.1 RefSeq:NP_001122319.1
RefSeq:NP_001122320.1 RefSeq:NP_003063.2 UniGene:Hs.327527 PDB:2GRC
PDB:2H60 PDB:3UVD PDBsum:2GRC PDBsum:2H60 PDBsum:3UVD
ProteinModelPortal:P51532 SMR:P51532 DIP:DIP-24249N IntAct:P51532
MINT:MINT-204078 STRING:P51532 PhosphoSite:P51532 DMDM:116242792
PaxDb:P51532 PRIDE:P51532 Ensembl:ENST00000344626
Ensembl:ENST00000413806 Ensembl:ENST00000429416
Ensembl:ENST00000444061 Ensembl:ENST00000450717
Ensembl:ENST00000541122 GeneID:6597 KEGG:hsa:6597 UCSC:uc002mqf.4
GeneCards:GC19P011071 HGNC:HGNC:11100 HPA:CAB004208 MIM:603254
MIM:613325 MIM:614609 neXtProt:NX_P51532 Orphanet:231108
PharmGKB:PA35950 ChiTaRS:SMARCA4 EvolutionaryTrace:P51532
GenomeRNAi:6597 NextBio:25661 ArrayExpress:P51532 Bgee:P51532
CleanEx:HS_SMARCA4 Genevestigator:P51532 GermOnline:ENSG00000127616
Uniprot:P51532
Length = 1647
Score = 2200 (779.5 bits), Expect = 0., Sum P(6) = 0.
Identities = 415/533 (77%), Positives = 472/533 (88%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY++AH V E V +Q++++VNG LK+YQIKGLEW+VSL+NNNLNGILADEMGLGKTIQT
Sbjct: 730 SYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQT 789
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IALITYLME K++NGPFLIIVPLSTLSNW+ EF++WAPSV V+YKGSP R+ Q++
Sbjct: 790 IALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLR 849
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFNVLLTTYEY+IKDK LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP RLLL
Sbjct: 850 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 909
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGEKV+LNEEETILIIRRLH
Sbjct: 910 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLH 969
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVE+QLP+KVEY+IKCDMS LQ+VLYRHM KG+LLTDGSE
Sbjct: 970 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGK 1029
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSG-IVSGPDLYRVSGKFELLDRIL 891
LMNTI+QLRK+CNHP+MFQ+IEE FS+H+G +G IV G DLYR SGKFELLDRIL
Sbjct: 1030 GGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRIL 1089
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL++T H+VLLFCQMT LM I+EDYF+YRGFKY+RLDGTTKAEDRG LLK FN P SEY
Sbjct: 1090 PKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEY 1149
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIF+LSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 1150 FIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1209
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEEN 1064
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +E+DE +
Sbjct: 1210 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEQDESRH 1261
Score = 776 (278.2 bits), Expect = 0., Sum P(6) = 0.
Identities = 164/310 (52%), Positives = 204/310 (65%)
Query: 184 KQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRA 243
KQS++T I KP GLDP+ ILQERE R+ I RI+EL +L +L LR KA IEL+A
Sbjct: 348 KQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELE-NLPGSLAGDLRTKATIELKA 406
Query: 244 LKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAER 303
L++LNFQRQLR EV+ C RRDT LETA+N KAYKR+KRQ L+EAR TEKLEKQQK+E ER
Sbjct: 407 LRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER 466
Query: 304 KKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXXXX 363
K+RQKHQEY+ ++LQH KDFKEYHR+ +I +L KAV YHAN
Sbjct: 467 KRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKER 526
Query: 364 XXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXXXXXXX 423
LMAEDEEGYRKLIDQKKDKRLA+LL QTDEY++NLT
Sbjct: 527 MRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKK- 585
Query: 424 XXSVKQKLMDTDGKVTL---DQ---DETSQLTDMHISVREISSGKVLKGEDAPLAAHLKQ 477
K+K + +G+ D DETSQ++D+ + V + SGK+L G DAP A L+
Sbjct: 586 ----KKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEA 641
Query: 478 WIQDHPGWEV 487
W++ +PG+EV
Sbjct: 642 WLEMNPGYEV 651
Score = 315 (115.9 bits), Expect = 0., Sum P(6) = 0.
Identities = 71/133 (53%), Positives = 91/133 (68%)
Query: 1040 STGSERHQFLQTI-----LHQDDEED--EEENAVPDDETVNQMLARSEEEFQTYQRIDAE 1092
STGS F T ++ D EE +EE+ VPDDETVNQM+AR EEEF + R+D +
Sbjct: 1263 STGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLD 1322
Query: 1093 RRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDY 1148
RR+E+ + K RL+E ELP W+IK+D E+E+ E +EEEK GRGSR RK+VDY
Sbjct: 1323 RRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCE-EEEEKMF--GRGSRHRKEVDY 1379
Query: 1149 TDSLTEKEWLKAI 1161
+DSLTEK+WLKAI
Sbjct: 1380 SDSLTEKQWLKAI 1392
Score = 309 (113.8 bits), Expect = 0., Sum P(6) = 0.
Identities = 62/107 (57%), Positives = 82/107 (76%)
Query: 1225 IMRVVIKYTDSD-GRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDE 1283
I+ VIKY DS GR LSE FI+LPSRKELP+YYE+I +P+D KKI RI + KY S+++
Sbjct: 1465 IVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 1524
Query: 1284 LQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPD 1330
L+KD LC+NAQ +N E SLI+EDS+VL+SVFT RQ++E +D +
Sbjct: 1525 LEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSE 1571
Score = 126 (49.4 bits), Expect = 0., Sum P(6) = 0.
Identities = 29/54 (53%), Positives = 35/54 (64%)
Query: 92 FTSAQVQQLRFQIMAYRLLARNQPLTPQLAMGVQGKR-MEGVPSG-PQMPPMSL 143
F Q+ QLR QIMAY++LAR QPL L M VQGKR M G+ P +PP S+
Sbjct: 172 FNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSV 225
Score = 77 (32.2 bits), Expect = 0., Sum P(6) = 0.
Identities = 11/29 (37%), Positives = 22/29 (75%)
Query: 50 PQENLTALQRAIDSMKEQGLEEDPRYQKL 78
PQ+N+ + + ++SM E+G+ +DPRY ++
Sbjct: 65 PQDNMHQMHKPMESMHEKGMSDDPRYNQM 93
Score = 59 (25.8 bits), Expect = 2.4e-34, Sum P(4) = 2.4e-34
Identities = 31/130 (23%), Positives = 61/130 (46%)
Query: 1028 EKVIQAGMFDQKSTGSERHQ-FLQTIL-HQDDEEDEEENAVPDDETVNQMLARSEEEFQT 1085
EK+ + +Q+ ++HQ +L +IL H D ++ + + + + +A T
Sbjct: 454 EKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVA-------T 506
Query: 1086 YQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQ 1145
Y A +EQ K++ IE + L+ EDEE + + K++++ ++ +Q
Sbjct: 507 YH---ANTEREQKKENERIEKERMRR-LMAEDEEGYRKLIDQKKDKRLAYL------LQQ 556
Query: 1146 VD-YTDSLTE 1154
D Y +LTE
Sbjct: 557 TDEYVANLTE 566
Score = 56 (24.8 bits), Expect = 6.4e-88, Sum P(4) = 6.4e-88
Identities = 27/143 (18%), Positives = 64/143 (44%)
Query: 998 KNEVRVLRLMTVNSVEERILA----AARYKLN----MDEKVIQAGMFDQKSTGSERHQFL 1049
K +R + ++N +E+ ++ A + L ++ ++ +F E+
Sbjct: 1511 KERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1570
Query: 1050 QTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRK-EQGKKSRLIEVSE 1108
+ +++EE EEE + + +V + +E + R+ RR+ +G +++ + VS+
Sbjct: 1571 EGEESEEEEEGEEEGSESESRSVKVKIKLGRKE-KAQDRLKGGRRRPSRGSRAKPV-VSD 1628
Query: 1109 LPDWLIKEDEEIEQWAFEAKEEE 1131
D E+E+ E + EE+
Sbjct: 1629 -DD---SEEEQEEDRSGSGSEED 1647
Score = 49 (22.3 bits), Expect = 2.6e-33, Sum P(4) = 2.6e-33
Identities = 23/112 (20%), Positives = 50/112 (44%)
Query: 989 QDRAHRIGQKNEVRVL-RLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQ 1047
Q+R +R+ + R+ R+ + ++ + R K ++ K ++ F + + Q
Sbjct: 368 QEREYRL----QARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQR-----QLRQ 418
Query: 1048 FLQTILHQDDEEDEEENAVPDDETVNQML--ARSEEEFQTYQRIDAERRKEQ 1097
+ + +D + NA + Q L AR E+ + Q+I+ ER++ Q
Sbjct: 419 EVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQ 470
Score = 47 (21.6 bits), Expect = 4.1e-33, Sum P(4) = 4.1e-33
Identities = 20/82 (24%), Positives = 44/82 (53%)
Query: 1054 HQDDE-EDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIE--VSELP 1110
H + E E ++EN + E + +++A EE ++ + ID ++ K + + V+ L
Sbjct: 508 HANTEREQKKENERIEKERMRRLMAEDEEGYR--KLIDQKKDKRLAYLLQQTDEYVANLT 565
Query: 1111 DWLIKEDEEIEQWAFEAKEEEK 1132
+ L+++ + Q A E K+++K
Sbjct: 566 E-LVRQ-HKAAQVAKEKKKKKK 585
Score = 41 (19.5 bits), Expect = 6.3e-115, Sum P(5) = 6.3e-115
Identities = 13/64 (20%), Positives = 27/64 (42%)
Query: 1037 DQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKE 1096
D + +GSE + +++EE++ + A P V + + + +DA E
Sbjct: 656 DSEESGSEEEE-------EEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIE 708
Query: 1097 QGKK 1100
K+
Sbjct: 709 NAKQ 712
Score = 40 (19.1 bits), Expect = 8.1e-115, Sum P(5) = 8.1e-115
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 1063 ENA---VPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIK 1115
ENA V D+ V+Q LAR Q+Y + + K+S L+ L + IK
Sbjct: 708 ENAKQDVDDEYGVSQALARG---LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIK 760
Score = 38 (18.4 bits), Expect = 3.1e-292, Sum P(4) = 3.1e-292
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 62 DSMKEQGLEEDPRYQKLIEMKANR 85
+ M+ E++ Y+KLI+ K ++
Sbjct: 525 ERMRRLMAEDEEGYRKLIDQKKDK 548
>UNIPROTKB|Q9HBD4 [details] [associations]
symbol:SMARCA4 "SMARCA4 isoform 2" species:9606 "Homo
sapiens" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005719 "nuclear
euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA]
[GO:0060318 "definitive erythrocyte differentiation" evidence=IEA]
[GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
EMBL:CH471106 GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792
GO:GO:0060347 GO:GO:0043966 GO:GO:0043388 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:AC011442
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 EMBL:AC011485
GO:GO:0005726 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
CTD:6597 EMBL:AF254822 EMBL:AC006127 UniGene:Hs.327527 GeneID:6597
KEGG:hsa:6597 HGNC:HGNC:11100 PharmGKB:PA35950 ChiTaRS:SMARCA4
GenomeRNAi:6597 NextBio:25661 IPI:IPI00900269 RefSeq:NP_001122321.1
SMR:Q9HBD4 STRING:Q9HBD4 Ensembl:ENST00000358026 UCSC:uc010dxo.3
Uniprot:Q9HBD4
Length = 1679
Score = 2200 (779.5 bits), Expect = 0., Sum P(6) = 0.
Identities = 415/533 (77%), Positives = 472/533 (88%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY++AH V E V +Q++++VNG LK+YQIKGLEW+VSL+NNNLNGILADEMGLGKTIQT
Sbjct: 730 SYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQT 789
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IALITYLME K++NGPFLIIVPLSTLSNW+ EF++WAPSV V+YKGSP R+ Q++
Sbjct: 790 IALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLR 849
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFNVLLTTYEY+IKDK LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP RLLL
Sbjct: 850 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 909
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGEKV+LNEEETILIIRRLH
Sbjct: 910 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLH 969
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVE+QLP+KVEY+IKCDMS LQ+VLYRHM KG+LLTDGSE
Sbjct: 970 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGK 1029
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSG-IVSGPDLYRVSGKFELLDRIL 891
LMNTI+QLRK+CNHP+MFQ+IEE FS+H+G +G IV G DLYR SGKFELLDRIL
Sbjct: 1030 GGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRIL 1089
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL++T H+VLLFCQMT LM I+EDYF+YRGFKY+RLDGTTKAEDRG LLK FN P SEY
Sbjct: 1090 PKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEY 1149
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIF+LSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 1150 FIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1209
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEEN 1064
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +E+DE +
Sbjct: 1210 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEQDESRH 1261
Score = 776 (278.2 bits), Expect = 0., Sum P(6) = 0.
Identities = 164/310 (52%), Positives = 204/310 (65%)
Query: 184 KQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRA 243
KQS++T I KP GLDP+ ILQERE R+ I RI+EL +L +L LR KA IEL+A
Sbjct: 348 KQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELE-NLPGSLAGDLRTKATIELKA 406
Query: 244 LKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAER 303
L++LNFQRQLR EV+ C RRDT LETA+N KAYKR+KRQ L+EAR TEKLEKQQK+E ER
Sbjct: 407 LRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER 466
Query: 304 KKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXXXX 363
K+RQKHQEY+ ++LQH KDFKEYHR+ +I +L KAV YHAN
Sbjct: 467 KRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKER 526
Query: 364 XXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXXXXXXX 423
LMAEDEEGYRKLIDQKKDKRLA+LL QTDEY++NLT
Sbjct: 527 MRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKK- 585
Query: 424 XXSVKQKLMDTDGKVTL---DQ---DETSQLTDMHISVREISSGKVLKGEDAPLAAHLKQ 477
K+K + +G+ D DETSQ++D+ + V + SGK+L G DAP A L+
Sbjct: 586 ----KKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEA 641
Query: 478 WIQDHPGWEV 487
W++ +PG+EV
Sbjct: 642 WLEMNPGYEV 651
Score = 310 (114.2 bits), Expect = 0., Sum P(6) = 0.
Identities = 70/133 (52%), Positives = 90/133 (67%)
Query: 1040 STGSERHQFLQTI-----LHQDDEED--EEENAVPDDETVNQMLARSEEEFQTYQRIDAE 1092
STGS F T ++ D EE +EE+ VPDDETVNQM+AR EEEF + R+D +
Sbjct: 1263 STGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLD 1322
Query: 1093 RRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDY 1148
RR+E+ + K RL+E ELP W+IK+D E+E+ E +EEEK GRGSR RK+VDY
Sbjct: 1323 RRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCE-EEEEKMF--GRGSRHRKEVDY 1379
Query: 1149 TDSLTEKEWLKAI 1161
+DSLTEK+WLK I
Sbjct: 1380 SDSLTEKQWLKKI 1392
Score = 309 (113.8 bits), Expect = 0., Sum P(6) = 0.
Identities = 62/107 (57%), Positives = 82/107 (76%)
Query: 1225 IMRVVIKYTDSD-GRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDE 1283
I+ VIKY DS GR LSE FI+LPSRKELP+YYE+I +P+D KKI RI + KY S+++
Sbjct: 1497 IVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 1556
Query: 1284 LQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPD 1330
L+KD LC+NAQ +N E SLI+EDS+VL+SVFT RQ++E +D +
Sbjct: 1557 LEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSE 1603
Score = 126 (49.4 bits), Expect = 0., Sum P(6) = 0.
Identities = 29/54 (53%), Positives = 35/54 (64%)
Query: 92 FTSAQVQQLRFQIMAYRLLARNQPLTPQLAMGVQGKR-MEGVPSG-PQMPPMSL 143
F Q+ QLR QIMAY++LAR QPL L M VQGKR M G+ P +PP S+
Sbjct: 172 FNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSV 225
Score = 77 (32.2 bits), Expect = 0., Sum P(6) = 0.
Identities = 11/29 (37%), Positives = 22/29 (75%)
Query: 50 PQENLTALQRAIDSMKEQGLEEDPRYQKL 78
PQ+N+ + + ++SM E+G+ +DPRY ++
Sbjct: 65 PQDNMHQMHKPMESMHEKGMSDDPRYNQM 93
Score = 59 (25.8 bits), Expect = 2.7e-34, Sum P(4) = 2.7e-34
Identities = 31/130 (23%), Positives = 61/130 (46%)
Query: 1028 EKVIQAGMFDQKSTGSERHQ-FLQTIL-HQDDEEDEEENAVPDDETVNQMLARSEEEFQT 1085
EK+ + +Q+ ++HQ +L +IL H D ++ + + + + +A T
Sbjct: 454 EKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVA-------T 506
Query: 1086 YQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQ 1145
Y A +EQ K++ IE + L+ EDEE + + K++++ ++ +Q
Sbjct: 507 YH---ANTEREQKKENERIEKERMRR-LMAEDEEGYRKLIDQKKDKRLAYL------LQQ 556
Query: 1146 VD-YTDSLTE 1154
D Y +LTE
Sbjct: 557 TDEYVANLTE 566
Score = 56 (24.8 bits), Expect = 7.8e-88, Sum P(4) = 7.8e-88
Identities = 27/143 (18%), Positives = 64/143 (44%)
Query: 998 KNEVRVLRLMTVNSVEERILA----AARYKLN----MDEKVIQAGMFDQKSTGSERHQFL 1049
K +R + ++N +E+ ++ A + L ++ ++ +F E+
Sbjct: 1543 KERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1602
Query: 1050 QTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRK-EQGKKSRLIEVSE 1108
+ +++EE EEE + + +V + +E + R+ RR+ +G +++ + VS+
Sbjct: 1603 EGEESEEEEEGEEEGSESESRSVKVKIKLGRKE-KAQDRLKGGRRRPSRGSRAKPV-VSD 1660
Query: 1109 LPDWLIKEDEEIEQWAFEAKEEE 1131
D E+E+ E + EE+
Sbjct: 1661 -DD---SEEEQEEDRSGSGSEED 1679
Score = 49 (22.3 bits), Expect = 2.8e-33, Sum P(4) = 2.8e-33
Identities = 23/112 (20%), Positives = 50/112 (44%)
Query: 989 QDRAHRIGQKNEVRVL-RLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQ 1047
Q+R +R+ + R+ R+ + ++ + R K ++ K ++ F + + Q
Sbjct: 368 QEREYRL----QARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQR-----QLRQ 418
Query: 1048 FLQTILHQDDEEDEEENAVPDDETVNQML--ARSEEEFQTYQRIDAERRKEQ 1097
+ + +D + NA + Q L AR E+ + Q+I+ ER++ Q
Sbjct: 419 EVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQ 470
Score = 47 (21.6 bits), Expect = 4.6e-33, Sum P(4) = 4.6e-33
Identities = 20/82 (24%), Positives = 44/82 (53%)
Query: 1054 HQDDE-EDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIE--VSELP 1110
H + E E ++EN + E + +++A EE ++ + ID ++ K + + V+ L
Sbjct: 508 HANTEREQKKENERIEKERMRRLMAEDEEGYR--KLIDQKKDKRLAYLLQQTDEYVANLT 565
Query: 1111 DWLIKEDEEIEQWAFEAKEEEK 1132
+ L+++ + Q A E K+++K
Sbjct: 566 E-LVRQ-HKAAQVAKEKKKKKK 585
Score = 41 (19.5 bits), Expect = 8.2e-115, Sum P(5) = 8.2e-115
Identities = 13/64 (20%), Positives = 27/64 (42%)
Query: 1037 DQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKE 1096
D + +GSE + +++EE++ + A P V + + + +DA E
Sbjct: 656 DSEESGSEEEE-------EEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIE 708
Query: 1097 QGKK 1100
K+
Sbjct: 709 NAKQ 712
Score = 40 (19.1 bits), Expect = 1.0e-114, Sum P(5) = 1.0e-114
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 1063 ENA---VPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIK 1115
ENA V D+ V+Q LAR Q+Y + + K+S L+ L + IK
Sbjct: 708 ENAKQDVDDEYGVSQALARG---LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIK 760
Score = 38 (18.4 bits), Expect = 1.0e-291, Sum P(4) = 1.0e-291
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 62 DSMKEQGLEEDPRYQKLIEMKANR 85
+ M+ E++ Y+KLI+ K ++
Sbjct: 525 ERMRRLMAEDEEGYRKLIDQKKDK 548
>UNIPROTKB|D4AA07 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS51194 SMART:SM00490 SMART:SM00592 RGD:621728
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OrthoDB:EOG418BMJ IPI:IPI00915110 Ensembl:ENSRNOT00000060926
ArrayExpress:D4AA07 Uniprot:D4AA07
Length = 1262
Score = 2200 (779.5 bits), Expect = 0., Sum P(3) = 0.
Identities = 415/533 (77%), Positives = 472/533 (88%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY++AH V E V +Q++++VNG LK+YQIKGLEW+VSL+NNNLNGILADEMGLGKTIQT
Sbjct: 529 SYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQT 588
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IALITYLME K++NGPFLIIVPLSTLSNW+ EF++WAPSV V+YKGSP R+ Q++
Sbjct: 589 IALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLR 648
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFNVLLTTYEY+IKDK LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP RLLL
Sbjct: 649 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 708
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGEKV+LNEEETILIIRRLH
Sbjct: 709 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLH 768
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVE+QLP+KVEY+IKCDMS LQ+VLYRHM KG+LLTDGSE
Sbjct: 769 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGK 828
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSG-IVSGPDLYRVSGKFELLDRIL 891
LMNTI+QLRK+CNHP+MFQ+IEE FS+H+G +G IV G DLYR SGKFELLDRIL
Sbjct: 829 GGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRIL 888
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL++T H+VLLFCQMT LM I+EDYF+YRGFKY+RLDGTTKAEDRG LLK FN P SEY
Sbjct: 889 PKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEY 948
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIF+LSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 949 FIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1008
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEEN 1064
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +E+DE +
Sbjct: 1009 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEQDESRH 1060
Score = 771 (276.5 bits), Expect = 0., Sum P(3) = 0.
Identities = 162/310 (52%), Positives = 204/310 (65%)
Query: 184 KQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRA 243
KQS++T I KP GLDP+ ILQERE R+ I RI+EL +L +L LR KA IEL+A
Sbjct: 147 KQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELE-NLPGSLAGDLRTKATIELKA 205
Query: 244 LKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAER 303
L++LNFQRQLR EV+ C RRDT LETA+N KAYKR+KRQ L+EAR TEKLEKQQK+E ER
Sbjct: 206 LRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER 265
Query: 304 KKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXXXX 363
K+RQKHQEY+ ++LQH KDF+EYHR+ ++ +L KAV YHAN
Sbjct: 266 KRRQKHQEYLNSILQHAKDFREYHRSVTGKLQKLTKAVATYHANTEREQKKENERIEKER 325
Query: 364 XXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXXXXXXX 423
LMAEDEEGYRKLIDQKKDKRLA+LL QTDEY++NLT
Sbjct: 326 MRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKK- 384
Query: 424 XXSVKQKLMDTDGKVTL---DQ---DETSQLTDMHISVREISSGKVLKGEDAPLAAHLKQ 477
K+K + +G+ D DETSQ++D+ + V + SGK+L G DAP A L+
Sbjct: 385 ----KKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEA 440
Query: 478 WIQDHPGWEV 487
W++ +PG+EV
Sbjct: 441 WLEMNPGYEV 450
Score = 308 (113.5 bits), Expect = 0., Sum P(3) = 0.
Identities = 69/133 (51%), Positives = 90/133 (67%)
Query: 1040 STGSERHQFLQTI-----LHQDDEED--EEENAVPDDETVNQMLARSEEEFQTYQRIDAE 1092
STGS F T ++ D EE +EE+ VPDDETVNQM+AR EEEF + R+D +
Sbjct: 1062 STGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLD 1121
Query: 1093 RRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDY 1148
RR+E+ + K RL+E ELP W+IK+D E+E+ E +EEEK GRGSR RK+VDY
Sbjct: 1122 RRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCE-EEEEKMF--GRGSRHRKEVDY 1178
Query: 1149 TDSLTEKEWLKAI 1161
+DSLTEK+WLK +
Sbjct: 1179 SDSLTEKQWLKQL 1191
Score = 46 (21.3 bits), Expect = 4.4e-310, Sum P(3) = 4.4e-310
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 1250 RKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDE 1283
RKE+ DY + + +K++ IE+G ++E
Sbjct: 1173 RKEV-DYSDSLTEKQWLKQLKAAIEEGTLEEIEE 1205
Score = 41 (19.5 bits), Expect = 1.6e-74, Sum P(3) = 1.6e-74
Identities = 13/64 (20%), Positives = 27/64 (42%)
Query: 1037 DQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKE 1096
D + +GSE + +++EE++ + A P V + + + +DA E
Sbjct: 455 DSEESGSEEEE-------EEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIE 507
Query: 1097 QGKK 1100
K+
Sbjct: 508 NAKQ 511
Score = 40 (19.1 bits), Expect = 2.0e-74, Sum P(3) = 2.0e-74
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 1063 ENA---VPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIK 1115
ENA V D+ V+Q LAR Q+Y + + K+S L+ L + IK
Sbjct: 507 ENAKQDVDDEYGVSQALARG---LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIK 559
Score = 38 (18.4 bits), Expect = 2.6e-260, Sum P(3) = 2.6e-260
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 62 DSMKEQGLEEDPRYQKLIEMKANR 85
+ M+ E++ Y+KLI+ K ++
Sbjct: 324 ERMRRLMAEDEEGYRKLIDQKKDK 347
>WB|WBGene00004204 [details] [associations]
symbol:swsn-4 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0040010 GO:GO:0006355
GO:GO:0003677 GO:GO:0040035 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 OMA:QKKYTIS InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:Z68751 EMBL:Z68341 EMBL:AF230280 PIR:T20488
RefSeq:NP_502082.1 UniGene:Cel.23435 ProteinModelPortal:G5EF53
SMR:G5EF53 EnsemblMetazoa:F01G4.1 GeneID:178015
KEGG:cel:CELE_F01G4.1 CTD:178015 WormBase:F01G4.1 NextBio:899366
Uniprot:G5EF53
Length = 1474
Score = 2132 (755.6 bits), Expect = 1.2e-311, Sum P(4) = 1.2e-311
Identities = 419/641 (65%), Positives = 510/641 (79%)
Query: 532 ATYYSIAHTVHEIVTEQASILVNGK----LKEYQIKGLEWMVSLFNNNLNGILADEMGLG 587
A YY+ AH + E V +Q + + G LK YQIKGLEWMVSL+NNNLNGILADEMGLG
Sbjct: 504 ADYYATAHKIKEKVVKQHTTMGGGDPNLLLKPYQIKGLEWMVSLYNNNLNGILADEMGLG 563
Query: 588 KTIQTIALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTL 647
KTIQTI+L+TYLME K+ NGP+L+IVPLSTLSNW EF +WAPSV + YKG+ R+ +
Sbjct: 564 KTIQTISLVTYLMEVKQNNGPYLVIVPLSTLSNWQNEFAKWAPSVTTIIYKGTKDARRRV 623
Query: 648 QAQMKASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAP 707
+ Q++ FNVL+TTYEYVIK+K L K+ WKYMIIDEGHR+KNH+CKLT +LN F+ A
Sbjct: 624 EGQIRKGAFNVLMTTYEYVIKEKALLGKIRWKYMIIDEGHRLKNHNCKLTLMLNGFFHAQ 683
Query: 708 HRLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILI 767
HRLLLTGTPLQNKLPELWALLNFLLPSIF S TFEQWFNAPFATTGEKVELN+EET+LI
Sbjct: 684 HRLLLTGTPLQNKLPELWALLNFLLPSIFSSCGTFEQWFNAPFATTGEKVELNQEETMLI 743
Query: 768 IRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEX 827
IRRLHKVLRPFLLRRLKKEVESQLPDK EY+IKCD S LQKV+YRHM KG+LL D
Sbjct: 744 IRRLHKVLRPFLLRRLKKEVESQLPDKTEYVIKCDQSALQKVIYRHMQ-KGLLL-DAK-- 799
Query: 828 XXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELL 887
LMNT+V LRKLCNHPF+F NIE+ + + V+G DL RV+GK ELL
Sbjct: 800 ---MSSGARSLMNTVVHLRKLCNHPFLFPNIEDSCRAYWKVNE-VNGTDLMRVAGKLELL 855
Query: 888 DRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAP 947
DRILPKLK+TGHR+L+F QMT +MNI ED+ ++R + Y+RLDG+TK ++RGDLL +FNAP
Sbjct: 856 DRILPKLKATGHRILMFFQMTSMMNIFEDFLNFRRYTYLRLDGSTKPDERGDLLTQFNAP 915
Query: 948 DSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLM 1007
+S+ F+F+LSTRAGGLGLNLQTADTVIIFDSDWNPHQD+QAQDRAHRIGQK EVRVLRL+
Sbjct: 916 NSDLFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLI 975
Query: 1008 TVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVP 1067
T NSVEE+ILAAARYKLN+DEKVIQAG FDQ+STG+ER Q L+ I+ D EE+EEE VP
Sbjct: 976 TANSVEEKILAAARYKLNVDEKVIQAGKFDQRSTGAERKQMLEQIIQADGEEEEEEE-VP 1034
Query: 1068 DDETVNQMLARSEEEFQTYQRIDAERRKEQG----KKSRLIEVSELPDWLIKEDEEIEQW 1123
DDETVNQM+ARSEEEF +Q +D +RR+E+ +K RL+E E+PD ++K + E+
Sbjct: 1035 DDETVNQMVARSEEEFNIFQSMDIDRRREEANQLHRKPRLLEEHEIPDDILKLSFDYEEM 1094
Query: 1124 AFEAKEEEKAL--HMGRGSRQRKQVDYT-DSLTEKEWLKAI 1161
A+EE + + R+R++VDY+ D L++++++K +
Sbjct: 1095 E-RAREEGREVVDQTPNQRRRRREVDYSSDLLSDEQFMKQV 1134
Score = 593 (213.8 bits), Expect = 1.2e-311, Sum P(4) = 1.2e-311
Identities = 115/220 (52%), Positives = 159/220 (72%)
Query: 182 QIKQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIEL 241
QI+ ++ T I P G+DP+ +L++REN + I R++ LN +L + +P+H+++KAEIEL
Sbjct: 158 QIRCNRPTTISVPSGIDPVGMLKQRENMIQNRIGLRMKLLN-NLPADIPDHMKLKAEIEL 216
Query: 242 RALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA 301
RAL+++N Q Q+R+EV+AC +RDTTLETA+N AY+RTKRQ L+EAR TEKLEKQQK+E
Sbjct: 217 RALRLVNLQTQVRSEVMACLKRDTTLETALNPYAYRRTKRQSLREARVTEKLEKQQKMEQ 276
Query: 302 ERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXX 361
ERK+RQKH + + ++QH K+FKEYHRNN ++ + KAVM YH N
Sbjct: 277 ERKRRQKHTDLMQAIIQHGKEFKEYHRNNLLKMAKSRKAVMTYHQNNERERKKDEIRNEK 336
Query: 362 XXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNL 401
LM EDEEGYR L+D+KKD+RL +LL QTDEY+ +L
Sbjct: 337 LRMQKLMQEDEEGYRALLDEKKDQRLVYLLQQTDEYVDSL 376
Score = 211 (79.3 bits), Expect = 1.2e-311, Sum P(4) = 1.2e-311
Identities = 41/107 (38%), Positives = 67/107 (62%)
Query: 1225 IMRVVIKYTDSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDEL 1284
++ V+++Y + DG ++++ F LP+RKELPDYY+VI +PMD +I +IE G+Y+ ++EL
Sbjct: 1189 MLDVILEYKNEDGELIADVFQTLPTRKELPDYYQVISKPMDFDRINKKIETGRYTVMEEL 1248
Query: 1285 QKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
D L NAQ YNEE S I+ S + ++ + + + P E
Sbjct: 1249 NDDMNLLVNNAQTYNEEGSEIYVSSETIGKLWKEQYDKFMNPPKPVE 1295
Score = 110 (43.8 bits), Expect = 1.2e-311, Sum P(4) = 1.2e-311
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 51 QE-NLTALQRAIDSMKEQGLEEDPRYQKLIEMKAN-RTEIKHA-----------FTSAQV 97
QE ++ L+ AI SM+EQGL+ D R+ K + +K ++ + A T AQ+
Sbjct: 33 QELTISKLENAITSMEEQGLQNDHRHAKAVLLKQKLQSGLPDAVPGQENGGNQQITPAQL 92
Query: 98 QQLRFQIMAYRLLARNQPLTPQL 120
QLR Q+ AYRLLARN+ + L
Sbjct: 93 NQLRAQVSAYRLLARNEQVPANL 115
Score = 105 (42.0 bits), Expect = 3.6e-260, Sum P(4) = 3.6e-260
Identities = 47/242 (19%), Positives = 95/242 (39%)
Query: 252 QLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQE 311
+L+AE+ A R L+T V + KR E ++ K ++ R+ R +
Sbjct: 209 KLKAEIELRALRLVNLQTQVRSEVMACLKRDTTLETALNPYAYRRTKRQSLREARVTEKL 268
Query: 312 YITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXXXXXXXLMAED 371
++ + ++ H + I++ K YH N ++
Sbjct: 269 EKQQKMEQERKRRQKHTDLMQAIIQHGKEFKEYHRNNLLKMAKSRKAVMTYH------QN 322
Query: 372 EEGYRKLIDQKKDK-RLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXXXXXXXXXSVKQK 430
E RK + + +K R+ L+ + +E L S+ ++
Sbjct: 323 NERERKKDEIRNEKLRMQKLMQEDEEGYRALLDEKKDQRLVYLLQQTDEYVDSLCSLVRQ 382
Query: 431 LMDTDGKVTLDQ---DETSQLTD-MHISVREISSGKVLKGEDAPLAAHLKQWIQDHPGWE 486
+T+ K + ++ +Q+ + + VRE S+GK L G+ AP ++ W++ HP +E
Sbjct: 383 HQNTEKKKKKEDKKIEKGNQMDEEARVHVRERSTGKALTGDQAPKTEEIEFWLETHPEYE 442
Query: 487 VV 488
+V
Sbjct: 443 IV 444
Score = 64 (27.6 bits), Expect = 5.3e-19, Sum P(4) = 5.3e-19
Identities = 21/102 (20%), Positives = 48/102 (47%)
Query: 1054 HQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWL 1113
HQ++E + +++ + +++ Q L + +EE Y+ + + +K+Q L + E D L
Sbjct: 320 HQNNERERKKDEIRNEKLRMQKLMQEDEE--GYRAL-LDEKKDQRLVYLLQQTDEYVDSL 376
Query: 1114 IKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEK 1155
+ + + K+E+K + G + +V + T K
Sbjct: 377 CSLVRQHQNTEKKKKKEDKKIEKGNQMDEEARVHVRERSTGK 418
Score = 61 (26.5 bits), Expect = 1.1e-78, Sum P(4) = 1.1e-78
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 1053 LHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKE 1096
L D+EE+EEE V +E + A +EE + ++ R +E
Sbjct: 449 LSDDEEEEEEEAPVEPEEEKDDQYAGMDEETKAKMILEKARNEE 492
Score = 61 (26.5 bits), Expect = 1.4e-19, Sum P(3) = 1.4e-19
Identities = 34/140 (24%), Positives = 62/140 (44%)
Query: 179 ISSQIKQSKLTNIPKPEGLDPLIILQERENRV--ALNIERRIEELNGSLTSTLPEHLRVK 236
I + ++ + +P E ++ ++ E E + +++I+RR EE N P L +
Sbjct: 1021 IQADGEEEEEEEVPDDETVNQMVARSEEEFNIFQSMDIDRRREEANQ--LHRKPRLLE-E 1077
Query: 237 AEIELRALKV-LNFQRQLRA-----EVIACARRDTTLETAVNVKAYKRTKRQGLKEARAT 290
EI LK+ +++ RA EV+ V+ + + Q +K+
Sbjct: 1078 HEIPDDILKLSFDYEEMERAREEGREVVDQTPNQRRRRREVDYSSDLLSDEQFMKQVEEV 1137
Query: 291 EKLEKQQKVEAERKKRQKHQ 310
E E Q V AERKK++K +
Sbjct: 1138 ED-ENNQAV-AERKKQRKRK 1155
Score = 56 (24.8 bits), Expect = 3.4e-18, Sum P(4) = 3.4e-18
Identities = 36/169 (21%), Positives = 74/169 (43%)
Query: 1000 EVRVLRLMTVNS-VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDE 1058
E+R LRL+ + + V ++A + + E + + + S R + L + +
Sbjct: 215 ELRALRLVNLQTQVRSEVMACLKRDTTL-ETALNPYAYRRTKRQSLREARVTEKLEKQQK 273
Query: 1059 EDEEENAVPDDETVNQMLARSEEEFQTYQRID----AERRK---------EQGKKSRLIE 1105
++E + Q + + +EF+ Y R + A+ RK E+ +K I
Sbjct: 274 MEQERKRRQKHTDLMQAIIQHGKEFKEYHRNNLLKMAKSRKAVMTYHQNNERERKKDEIR 333
Query: 1106 VSELP-DWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVD-YTDSL 1152
+L L++EDEE + + K++++ +++ +Q D Y DSL
Sbjct: 334 NEKLRMQKLMQEDEEGYRALLDEKKDQRLVYL------LQQTDEYVDSL 376
Score = 48 (22.0 bits), Expect = 2.5e-77, Sum P(4) = 2.5e-77
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 1037 DQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQML---ARSEEE 1082
DQ S E + + + +EE +++ A D+ET +M+ AR+EE+
Sbjct: 447 DQLSDDEEEEEEEAPV--EPEEEKDDQYAGMDEETKAKMILEKARNEED 493
Score = 47 (21.6 bits), Expect = 2.8e-17, Sum P(4) = 2.8e-17
Identities = 35/153 (22%), Positives = 67/153 (43%)
Query: 983 HQDLQAQDRAHRIGQKNE-VRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMF-DQKS 1040
HQ+ + + + I +NE +R+ +LM + R L + + + Q + D
Sbjct: 320 HQNNERERKKDEI--RNEKLRMQKLMQEDEEGYRALLDEKKDQRLVYLLQQTDEYVDSLC 377
Query: 1041 TGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKK 1100
+ +HQ + ++D++ E+ N + D+E + RS + T + E +
Sbjct: 378 SLVRQHQNTEKKKKKEDKKIEKGNQM-DEEARVHVRERSTGKALTGDQAPKTEEIEFWLE 436
Query: 1101 SRLIEVSELP-DWLIKEDEEIEQWAFEAKEEEK 1132
+ E +P D L ++EE E+ A EEEK
Sbjct: 437 THP-EYEIVPRDQLSDDEEEEEEEAPVEPEEEK 468
Score = 46 (21.3 bits), Expect = 1.1e-59, Sum P(3) = 1.1e-59
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 875 PDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNIL 914
PD Y+V K DRI K++ TG R + ++ MN+L
Sbjct: 1218 PDYYQVISKPMDFDRINKKIE-TG-RYTVMEELNDDMNLL 1255
Score = 43 (20.2 bits), Expect = 8.2e-77, Sum P(4) = 8.2e-77
Identities = 29/114 (25%), Positives = 47/114 (41%)
Query: 1024 LNMDEKVIQAGMFDQKSTGSERHQFLQTIL-----HQDDEEDEEENAVPDDETVNQMLAR 1078
+++D + +A +K E H+ IL +++ E EE D+T NQ R
Sbjct: 1056 MDIDRRREEANQLHRKPRLLEEHEIPDDILKLSFDYEEMERAREEGREVVDQTPNQRRRR 1115
Query: 1079 SEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEK 1132
E ++ + D EQ K +V E+ EDE Q E K++ K
Sbjct: 1116 REVDYSSDLLSD-----EQFMK----QVEEV------EDEN-NQAVAERKKQRK 1153
Score = 42 (19.8 bits), Expect = 8.8e-17, Sum P(4) = 8.8e-17
Identities = 23/104 (22%), Positives = 46/104 (44%)
Query: 1004 LRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEE 1063
LR+ +N++ I + K ++ + ++ Q SE + L +D +
Sbjct: 192 LRMKLLNNLPADIPDHMKLKAEIELRALRLVNL-QTQVRSE----VMACLKRDTTLETAL 246
Query: 1064 NAVPDDETVNQML--ARSEEEFQTYQRIDAERRKEQGKKSRLIE 1105
N T Q L AR E+ + Q+++ ER++ Q K + L++
Sbjct: 247 NPYAYRRTKRQSLREARVTEKLEKQQKMEQERKRRQ-KHTDLMQ 289
Score = 39 (18.8 bits), Expect = 3.3e-253, Sum P(4) = 3.3e-253
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 268 ETAVNVKAYKRTKRQGL-KEARATEKLEKQQKVEAERKKRQKHQ--EYITT 315
E V + K + G+ +E +A LEK + E E ++ K Q +Y T
Sbjct: 459 EAPVEPEEEKDDQYAGMDEETKAKMILEKARNEEDEYDQKTKKQMADYYAT 509
Score = 38 (18.4 bits), Expect = 4.2e-253, Sum P(4) = 4.2e-253
Identities = 20/101 (19%), Positives = 36/101 (35%)
Query: 203 LQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLRAEVIACAR 262
L R +V N+ L +T+ LPE E E + + I C
Sbjct: 104 LLARNEQVPANLIADAVMLRPKVTTLLPEPYEYPGEAENGEKLPYDLMKIFNLHQIRC-N 162
Query: 263 RDTTLETAVNVKAYKRTK-RQGLKEARATEKLEKQQKVEAE 302
R TT+ + K R+ + + R +++ + A+
Sbjct: 163 RPTTISVPSGIDPVGMLKQRENMIQNRIGLRMKLLNNLPAD 203
Score = 38 (18.4 bits), Expect = 7.0e-17, Sum P(4) = 7.0e-17
Identities = 27/122 (22%), Positives = 48/122 (39%)
Query: 220 ELNGSLTSTLPEHL-RVKAEIELRALKVLNFQRQL--RAE-VIACARRDTTLETAVNVKA 275
ELN T + L +V LR LK + QL + E VI C D ++A+
Sbjct: 734 ELNQEETMLIIRRLHKVLRPFLLRRLKK-EVESQLPDKTEYVIKC---D---QSALQKVI 786
Query: 276 YKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIM 335
Y+ ++ L +A+ + +K H + C+ + + + N +M
Sbjct: 787 YRHMQKGLLLDAKMSSGARSLMNTVVHLRKLCNHPFLFPNIEDSCRAYWKVNEVNGTDLM 846
Query: 336 RL 337
R+
Sbjct: 847 RV 848
>UNIPROTKB|K7GT64 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000034320 Uniprot:K7GT64
Length = 980
Score = 2200 (779.5 bits), Expect = 1.1e-289, Sum P(3) = 1.1e-289
Identities = 415/533 (77%), Positives = 472/533 (88%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YY++AH V E V +Q++++VNG LK+YQIKGLEW+VSL+NNNLNGILADEMGLGKTIQT
Sbjct: 63 SYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQT 122
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IALITYLME K++NGPFLIIVPLSTLSNW+ EF++WAPSV V+YKGSP R+ Q++
Sbjct: 123 IALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLR 182
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
+ KFNVLLTTYEY+IKDK LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP RLLL
Sbjct: 183 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 242
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQNKLPELWALLNFLLP+IFKS STFEQWFNAPFA TGEKV+LNEEETILIIRRLH
Sbjct: 243 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLH 302
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
KVLRPFLLRRLKKEVE+QLP+KVEY+IKCDMS LQ+VLYRHM KG+LLTDGSE
Sbjct: 303 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGK 362
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSG-IVSGPDLYRVSGKFELLDRIL 891
LMNTI+QLRK+CNHP+MFQ+IEE FS+H+G +G IV G DLYR SGKFELLDRIL
Sbjct: 363 GGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRIL 422
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL++T H+VLLFCQMT LM I+EDYF+YRGFKY+RLDGTTKAEDRG LLK FN P SEY
Sbjct: 423 PKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEY 482
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIF+LSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNS
Sbjct: 483 FIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 542
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEEN 1064
VEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL + +E+DE +
Sbjct: 543 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL-EHEEQDESRH 594
Score = 315 (115.9 bits), Expect = 1.1e-289, Sum P(3) = 1.1e-289
Identities = 71/133 (53%), Positives = 91/133 (68%)
Query: 1040 STGSERHQFLQTI-----LHQDDEED--EEENAVPDDETVNQMLARSEEEFQTYQRIDAE 1092
STGS F T ++ D EE +EE+ VPDDETVNQM+AR EEEF + R+D +
Sbjct: 596 STGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLD 655
Query: 1093 RRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDY 1148
RR+E+ + K RL+E ELP W+IK+D E+E+ E +EEEK GRGSR RK+VDY
Sbjct: 656 RRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCE-EEEEKMF--GRGSRHRKEVDY 712
Query: 1149 TDSLTEKEWLKAI 1161
+DSLTEK+WLKAI
Sbjct: 713 SDSLTEKQWLKAI 725
Score = 309 (113.8 bits), Expect = 1.1e-289, Sum P(3) = 1.1e-289
Identities = 62/107 (57%), Positives = 82/107 (76%)
Query: 1225 IMRVVIKYTDSD-GRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDE 1283
I+ VIKY DS GR LSE FI+LPSRKELP+YYE+I +P+D KKI RI + KY S+++
Sbjct: 798 IVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 857
Query: 1284 LQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPD 1330
L+KD LC+NAQ +N E SLI+EDS+VL+SVFT RQ++E +D +
Sbjct: 858 LEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSE 904
Score = 40 (19.1 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 1063 ENA---VPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIK 1115
ENA V D+ V+Q LAR Q+Y + + K+S L+ L + IK
Sbjct: 41 ENAKQDVDDEYGVSQALARG---LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIK 93
>UNIPROTKB|F1S594 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000014884 OMA:KSSGHER Uniprot:F1S594
Length = 866
Score = 2458 (870.3 bits), Expect = 1.5e-285, Sum P(2) = 1.5e-285
Identities = 469/615 (76%), Positives = 535/615 (86%)
Query: 552 LVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLI 611
+VNG LK+YQIKGLEW+VSL+NNNLNGILADEMGLGKTIQTIALITYLME K++NGPFLI
Sbjct: 1 MVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLI 60
Query: 612 IVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKG 671
IVPLSTLSNW+ EF++WAPSV V+YKGSP R+ Q+++ KFNVLLTTYEY+IKDK
Sbjct: 61 IVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKH 120
Query: 672 PLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLNFL 731
LAK+ WKYMI+DEGHRMKNHHCKLT +LNT YVAP RLLLTGTPLQNKLPELWALLNFL
Sbjct: 121 ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFL 180
Query: 732 LPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQL 791
LP+IFKS STFEQWFNAPFA TGEKV+LNEEETILIIRRLHKVLRPFLLRRLKKEVE+QL
Sbjct: 181 LPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQL 240
Query: 792 PDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNH 851
P+KVEY+IKCDMS LQ+VLYRHM KG+LLTDGSE LMNTI+QLRK+CNH
Sbjct: 241 PEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNH 300
Query: 852 PFMFQNIEEKFSDHVGGSG-IVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQL 910
P+MFQ+IEE FS+H+G +G IV G DLYR SGKFELLDRILPKL++T H+VLLFCQMT L
Sbjct: 301 PYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSL 360
Query: 911 MNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTA 970
M I+EDYF+YRGFKY+RLDGTTKAEDRG LLK FN P SEYFIF+LSTRAGGLGLNLQ+A
Sbjct: 361 MTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSA 420
Query: 971 DTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKV 1030
DTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KV
Sbjct: 421 DTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 480
Query: 1031 IQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRID 1090
IQAGMFDQKS+ ER FLQ IL + +E+DEEE+ VPDDETVNQM+AR EEEF + R+D
Sbjct: 481 IQAGMFDQKSSSHERRAFLQAIL-EHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMD 539
Query: 1091 AERRKEQGK----KSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQV 1146
+RR+E+ + K RL+E ELP W+IK+D E+E+ E +EEEK GRGSR RK+V
Sbjct: 540 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCE-EEEEKMF--GRGSRHRKEV 596
Query: 1147 DYTDSLTEKEWLKAI 1161
DY+DSLTEK+WLKAI
Sbjct: 597 DYSDSLTEKQWLKAI 611
Score = 309 (113.8 bits), Expect = 1.5e-285, Sum P(2) = 1.5e-285
Identities = 62/107 (57%), Positives = 82/107 (76%)
Query: 1225 IMRVVIKYTDSD-GRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDE 1283
I+ VIKY DS GR LSE FI+LPSRKELP+YYE+I +P+D KKI RI + KY S+++
Sbjct: 684 IVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 743
Query: 1284 LQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPD 1330
L+KD LC+NAQ +N E SLI+EDS+VL+SVFT RQ++E +D +
Sbjct: 744 LEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSE 790
>POMBASE|SPAC1250.01 [details] [associations]
symbol:snf21 "ATP-dependent DNA helicase Snf21"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000991 "core RNA polymerase II binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IC] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0016586 "RSC complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 PomBase:SPAC1250.01 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0006338 GO:GO:0000790
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172362
KO:K11786 EMBL:AB162438 PIR:T37561 RefSeq:NP_594861.1
ProteinModelPortal:Q9UTN6 DIP:DIP-48388N STRING:Q9UTN6
EnsemblFungi:SPAC1250.01.1 GeneID:2542638 KEGG:spo:SPAC1250.01
OMA:WAPSISA OrthoDB:EOG4D565R NextBio:20803687 Uniprot:Q9UTN6
Length = 1199
Score = 1927 (683.4 bits), Expect = 5.6e-243, Sum P(4) = 5.6e-243
Identities = 373/633 (58%), Positives = 489/633 (77%)
Query: 534 YYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTI 593
YY++AH + E+VTEQ SILV GKLKEYQ++GL+WM+SL+NN+LNGILADEMGLGKTIQTI
Sbjct: 394 YYNVAHNIREVVTEQPSILVGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTI 453
Query: 594 ALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKA 653
+LIT+L+EKK+ NGPFL+IVPLSTL+NW++EFERWAPS+ + YKG P +RK L Q++
Sbjct: 454 SLITHLIEKKRQNGPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKALHPQVRH 513
Query: 654 SKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLT 713
S F VLLTTYEY+IKD+ L+++ W YMIIDEGHRMKN KLT+ L T+Y + +RL+LT
Sbjct: 514 SNFQVLLTTYEYIIKDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILT 573
Query: 714 GTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTG--EKVELNEEETILIIRRL 771
GTPLQN LPELWALLNF+LP IF S+ +F++WFN PFA TG +K+EL EEE++L+IRRL
Sbjct: 574 GTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRRL 633
Query: 772 HKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXX 831
HKVLRPFLLRRLKK+VE++LPDKVE +I+C MSGLQ+ LY M G+L + ++
Sbjct: 634 HKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVEDAKRGKTG 693
Query: 832 XXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRIL 891
L NT++QL+K+CNHPF+F+++E D G + + L+RVSGKFELLDRIL
Sbjct: 694 IKG---LQNTVMQLKKICNHPFVFEDVERSI-DPTGFNYDM----LWRVSGKFELLDRIL 745
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL +GHR+L+F QMTQ+MNI+EDY YR ++Y+RLDG+TKA+DR LL FN P +E
Sbjct: 746 PKLFRSGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEV 805
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
+F+LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQ EVR+ RL+T S
Sbjct: 806 NLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKS 865
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDD-EEDEEENAVPDDE 1070
VEE ILA A+YKL++D KVIQAG FD KST ER FL+++L ++ EE+ +E DD+
Sbjct: 866 VEENILARAQYKLDIDGKVIQAGKFDNKSTPEEREAFLRSLLENENGEEENDEKGELDDD 925
Query: 1071 TVNQMLARSEEEFQTYQRI--DAERRKEQGK---KSRLIEVSELPDWLIKEDEEIEQWAF 1125
+N++LAR ++E + ++++ D ER GK K RLI+VSELP++ +E+ E
Sbjct: 926 ELNEILARGDDELRLFKQMTEDLERESPYGKNKEKERLIQVSELPEFYQREEPEKTT--- 982
Query: 1126 EAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWL 1158
+ +EE +GRG+R+R V Y +++ + +W+
Sbjct: 983 DLLQEEP---LGRGARRRTPVVYDEAVRDAQWM 1012
Score = 254 (94.5 bits), Expect = 5.6e-243, Sum P(4) = 5.6e-243
Identities = 61/188 (32%), Positives = 95/188 (50%)
Query: 214 IERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLRAEVIACARRDTTLETAVNV 273
+ R + EL + ++ A +EL+ L+++ Q LR +V+ C T+ AV
Sbjct: 174 VMRDVAELKDDNERLNLDTIKRNALVELKKLRLIKQQESLRHQVMHCQPHLRTIVNAVER 233
Query: 274 KAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQAR 333
+ +R K + R TE LE+QQ+ + ER+ +QK +Y+ TV H ++ +N QAR
Sbjct: 234 MSCRRPKLVP-QATRLTEVLERQQRSDRERRLKQKQCDYLQTVCAHGREINVRTKNAQAR 292
Query: 334 IMRLNKAVMNYHANAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQ 393
+ N+AV+ YH++ L DEE Y KLIDQ KD R+ LL Q
Sbjct: 293 AQKANRAVLAYHSHIEKEEQRRAERNAKQRLQALKENDEEAYLKLIDQAKDTRITHLLRQ 352
Query: 394 TDEYISNL 401
TD Y+ +L
Sbjct: 353 TDHYLDSL 360
Score = 167 (63.8 bits), Expect = 5.6e-243, Sum P(4) = 5.6e-243
Identities = 35/103 (33%), Positives = 60/103 (58%)
Query: 1225 IMRVVIKYTDSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDEL 1284
I + V + D +GR L++ F++LPS+K PDYY +I P+ + I I Y +++ +
Sbjct: 1073 IYKAVNELEDDNGRPLNKLFLELPSKKLYPDYYMIIKSPIALDAIRKHINGTFYKTLEAM 1132
Query: 1285 QKDFKTLCRNAQIYNEELSLIHEDSVVLESVF-TKARQRVESG 1326
+ D T+ NA+ YNEE S ++ED+ +++ TK + E G
Sbjct: 1133 KSDLMTMFNNARTYNEEGSFVYEDANKMQTAMETKIEELEEDG 1175
Score = 47 (21.6 bits), Expect = 5.6e-243, Sum P(4) = 5.6e-243
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 76 QKLIEMKAN-RTEIKHAFTSAQVQQ----LRFQIMAYRLLARNQPLTPQLAMGV 124
Q IE + + + IK F+S L+ Q++AY+ L++N P + V
Sbjct: 46 QSEIEARRDLKGHIKRCFSSVDKNTEKLILKQQVLAYKKLSQNLPAPDDCILSV 99
Score = 41 (19.5 bits), Expect = 5.6e-16, Sum P(3) = 5.6e-16
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 780 LRRLKKEVESQLPDKVE 796
LR ++ E SQL D++E
Sbjct: 1180 LRGMEAEATSQLEDRIE 1196
Score = 41 (19.5 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 36/152 (23%), Positives = 61/152 (40%)
Query: 1009 VNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERH------QFLQTIL-HQDDEEDE 1061
VN+VE ++ R KL + + Q+ + ER +LQT+ H +
Sbjct: 228 VNAVER--MSCRRPKLVPQATRLTEVLERQQRSDRERRLKQKQCDYLQTVCAHGREINVR 285
Query: 1062 EENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIE 1121
+NA + N R+ + ++ + +RR E+ K RL + E DEE
Sbjct: 286 TKNAQARAQKAN----RAVLAYHSHIEKEEQRRAERNAKQRLQALKE-------NDEEAY 334
Query: 1122 QWAFEAKEEEKALHMGRGSRQRKQVD-YTDSL 1152
+ ++ + H+ R Q D Y DSL
Sbjct: 335 LKLIDQAKDTRITHLLR------QTDHYLDSL 360
>ASPGD|ASPL0000042729 [details] [associations]
symbol:AN2278 species:162425 "Emericella nidulans"
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194
SMART:SM00297 SMART:SM00490 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 EMBL:BN001307
GO:GO:0004386 EMBL:AACD01000038 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R RefSeq:XP_659882.1
ProteinModelPortal:Q5BB02 STRING:Q5BB02
EnsemblFungi:CADANIAT00008970 GeneID:2875521 KEGG:ani:AN2278.2
OMA:GSDHSSP Uniprot:Q5BB02
Length = 1407
Score = 1934 (685.9 bits), Expect = 3.1e-242, Sum P(4) = 3.1e-242
Identities = 378/637 (59%), Positives = 486/637 (76%)
Query: 534 YYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTI 593
YY++AH + E +TEQ SILV G LKEYQ+KGL+WM+SL+NNNLNGILADEMGLGKTIQTI
Sbjct: 514 YYAVAHRIKEEITEQPSILVGGTLKEYQMKGLQWMISLYNNNLNGILADEMGLGKTIQTI 573
Query: 594 ALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKA 653
+LIT+++E+K+ NGPFL+IVPLSTL+NW+LEFE+WAPSV+ + YKG P+ RK Q ++
Sbjct: 574 SLITHIIERKRNNGPFLVIVPLSTLTNWNLEFEKWAPSVSRIVYKGPPNARKQQQQNIRW 633
Query: 654 SKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLT 713
F VLLTTYEY+IKD+ L+K+ W +MI+DEGHRMKN KL+ L+ +Y + +RL+LT
Sbjct: 634 GNFQVLLTTYEYIIKDRPILSKIKWTHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILT 693
Query: 714 GTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTG--EKVELNEEETILIIRRL 771
GTPLQN LPELWALLNF+LP+IFKSV +F++WFN PFA TG ++++L EEE +L+IRRL
Sbjct: 694 GTPLQNNLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLTEEEQLLVIRRL 753
Query: 772 HKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKG-ILLTDGSEXXXX 830
HKVLRPFLLRRLKK+VE LPDK E +IKC S LQ L + + T ++++DG
Sbjct: 754 HKVLRPFLLRRLKKDVEKDLPDKQERVIKCRFSALQAKLNKQLATHNKMVVSDGK----G 809
Query: 831 XXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRI 890
L N ++QLRKLCNHPF+F+ +E++ + G + ++ +R +GKFELLDRI
Sbjct: 810 GKVGMRGLSNMLMQLRKLCNHPFVFEQVEDQVNPGRGTNDLI-----WRTAGKFELLDRI 864
Query: 891 LPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSE 950
LPK K+TGHRVL+F QMTQ+MNI+ED+ RG KY+RLDG+TK++DR DLLK FNAPDSE
Sbjct: 865 LPKFKATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKLFNAPDSE 924
Query: 951 YFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVN 1010
YF F+LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVR+LRL+T N
Sbjct: 925 YFCFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSN 984
Query: 1011 SVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEE-ENAVPDD 1069
SVEE+IL A++KL+MD KVIQAG FD KST ER L+T+L + D+ + DD
Sbjct: 985 SVEEKILERAQFKLDMDGKVIQAGKFDNKSTNEERDALLRTLLETAEGTDQAGDQDEMDD 1044
Query: 1070 ETVNQMLARSEEEFQTYQRIDAERRKE----QGKK-SRLIEVSELPDWLIKEDEEIEQWA 1124
+ +N ++ARS+EE +QR+D ER+K G K RL+ SELP+ + E+ + +
Sbjct: 1045 DDLNNIMARSDEELAVFQRMDRERQKTCPYGPGHKLPRLMGESELPEIYVTEENPVAE-- 1102
Query: 1125 FEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
EA E E + GRG+R+RK Y D LTE++WL A+
Sbjct: 1103 -EAAEIELS---GRGARERKITRYDDGLTEEQWLMAV 1135
Score = 239 (89.2 bits), Expect = 3.1e-242, Sum P(4) = 3.1e-242
Identities = 67/220 (30%), Positives = 107/220 (48%)
Query: 194 PEGLDPLIILQERENRVALNIERRIEEL-----------NG-SLTSTLPEHLRVKAEIEL 241
P G+D + +ERE + I R EL +G S +T + L++KA IE
Sbjct: 250 PPGIDLEQVREEREVALYNRINARKAELAALPANIAAWNSGQSDVATGDDSLKLKALIEY 309
Query: 242 RALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA 301
R L +L QR LR ++ L N ++R K+Q L+EAR TEKLEKQQ+
Sbjct: 310 RMLNLLPKQRLLRKQIQHEMFHYDNLGMTANRATHRRMKKQSLREARITEKLEKQQRDAR 369
Query: 302 ERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXX 361
E ++++K ++ ++ H + +E + R +L + ++ +H +
Sbjct: 370 ESREKRKQDVHLQAIVNHGAELRETASQQRQRAGKLGRMMLQHHQHMEREEQRRVERTAK 429
Query: 362 XXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNL 401
L A DEE Y KL+ Q KD R++ LL+QTD ++ L
Sbjct: 430 QRLQALKANDEETYLKLLGQAKDSRISHLLNQTDGFLKQL 469
Score = 148 (57.2 bits), Expect = 3.1e-242, Sum P(4) = 3.1e-242
Identities = 31/86 (36%), Positives = 53/86 (61%)
Query: 1233 TDS-DG---RVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDELQKDF 1288
+DS DG R + EPF+K P + + PDYY +I P+ + I +I +Y S+ + + D
Sbjct: 1255 SDSEDGPVTRSIIEPFMKPPPKSQYPDYYMIIQNPIAMDMIKKKINREEYQSLRDFRNDI 1314
Query: 1289 KTLCRNAQIYNEELSLIHEDSVVLES 1314
LC+NA+ YNE+ S++ +D+ +E+
Sbjct: 1315 GLLCQNARTYNEDGSILFQDANDIEA 1340
Score = 67 (28.6 bits), Expect = 3.1e-242, Sum P(4) = 3.1e-242
Identities = 12/30 (40%), Positives = 23/30 (76%)
Query: 91 AFTSAQVQQLRFQIMAYRLLARNQPLTPQL 120
+F++ Q+Q LR QIMA+++L +N + P++
Sbjct: 138 SFSADQLQTLRNQIMAFKMLTKNLQIPPRV 167
Score = 64 (27.6 bits), Expect = 6.3e-242, Sum P(4) = 6.3e-242
Identities = 26/87 (29%), Positives = 40/87 (45%)
Query: 50 PQENLTALQRAIDSMKEQGL-EEDPRYQKLIEMKANRTEIKHAFTSA-QVQQLRFQIMAY 107
PQ LQ+ M+EQG+ ++DP Y K + + + + AF Q+ Q + Q+ A
Sbjct: 24 PQHIQETLQK-FKQMQEQGVRQDDPEYLKAHNL-LSAVQRQQAFQKQRQLAQQQQQLQAQ 81
Query: 108 RLLARNQPLTPQLAMGVQGKRMEGVPS 134
R +N T Q A+ G PS
Sbjct: 82 RQQQQNGSST-QEAVAPNGVNNRANPS 107
Score = 57 (25.1 bits), Expect = 3.5e-28, Sum P(4) = 3.5e-28
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 1052 ILHQDDEEDEEE--NAVP-DDETVNQMLARSEEEFQTYQRIDAERR--KEQGKKSR---L 1103
I DD EE+ AV DD+T+ +AR E + +R + E+R K QG +S
Sbjct: 1119 ITRYDDGLTEEQWLMAVDADDDTIEDAIARKEARVEK-RRSNKEKRGRKAQGDESSPEPS 1177
Query: 1104 IEVSELP 1110
E SE P
Sbjct: 1178 RETSETP 1184
Score = 55 (24.4 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 23/81 (28%), Positives = 35/81 (43%)
Query: 237 AEIEL-----RALKVLNFQRQLRAE--VIACARRDTTLETAVNVKAYKRTKRQGLKEARA 289
AEIEL R K+ + L E ++A D T+E A+ K + KR+ KE R
Sbjct: 1105 AEIELSGRGARERKITRYDDGLTEEQWLMAVDADDDTIEDAIARKEARVEKRRSNKEKRG 1164
Query: 290 TEKLEKQQKVEAERKKRQKHQ 310
+ + E R+ + Q
Sbjct: 1165 RKAQGDESSPEPSRETSETPQ 1185
Score = 53 (23.7 bits), Expect = 5.0e-09, Sum P(4) = 5.0e-09
Identities = 28/109 (25%), Positives = 51/109 (46%)
Query: 204 QERENRVALNIERRIEEL--NGSLTSTLPEHLRVKAEIELRALKVLNFQRQLRAEVIACA 261
Q+R +R+ E RI L + S+ + E + K +++ + ++ F + E
Sbjct: 963 QDRAHRIGQKNEVRILRLITSNSVEEKILERAQFKLDMDGKVIQAGKFDNKSTNEERDAL 1022
Query: 262 RRDTTLETAVNV-KAYKRTKRQG--LKE--ARATEKLEKQQKVEAERKK 305
R T LETA +A + + L AR+ E+L Q+++ ER+K
Sbjct: 1023 LR-TLLETAEGTDQAGDQDEMDDDDLNNIMARSDEELAVFQRMDRERQK 1070
Score = 43 (20.2 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 23/98 (23%), Positives = 47/98 (47%)
Query: 983 HQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEE--RILAAAR-----YKLNMDE---KVIQ 1032
HQ ++ +++ R+ + + R L+ + N E ++L A+ + LN + K +
Sbjct: 413 HQHMEREEQ-RRVERTAKQR-LQALKANDEETYLKLLGQAKDSRISHLLNQTDGFLKQLA 470
Query: 1033 AGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDE 1070
A + Q+ +ER+ H D++D+E+ A DE
Sbjct: 471 ASVRQQQRNQAERYGEE----HDFDDDDDEDIASGSDE 504
Score = 40 (19.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 11/49 (22%), Positives = 23/49 (46%)
Query: 1053 LHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKS 1101
+ QDD E + + + Q + + Q Q++ A+R+++Q S
Sbjct: 42 VRQDDPEYLKAHNLLSAVQRQQAFQKQRQLAQQQQQLQAQRQQQQNGSS 90
Score = 38 (18.4 bits), Expect = 2.5e-215, Sum P(3) = 2.5e-215
Identities = 7/28 (25%), Positives = 21/28 (75%)
Query: 280 KRQGLKEARATEKLEKQQKVEAERKKRQ 307
++Q ++ R + ++QQ+++A+R+++Q
Sbjct: 61 RQQAFQKQR--QLAQQQQQLQAQRQQQQ 86
Score = 37 (18.1 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 268 ETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYIT 314
ET+ + KR +R + +A E E+ + + +R ++ K E ++
Sbjct: 1179 ETSETPQPKKRGRRGPAPKRKAEELAEETPQPKRKRGRQAKPVETLS 1225
>WB|WBGene00016868 [details] [associations]
symbol:C52B9.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:FO080644 PIR:T28937 RefSeq:NP_508736.1
ProteinModelPortal:Q22944 SMR:Q22944 STRING:Q22944 PaxDb:Q22944
EnsemblMetazoa:C52B9.8 GeneID:180705 KEGG:cel:CELE_C52B9.8
UCSC:C52B9.8 CTD:180705 WormBase:C52B9.8 InParanoid:Q22944
NextBio:910548 Uniprot:Q22944
Length = 1336
Score = 2056 (728.8 bits), Expect = 7.0e-239, Sum P(3) = 7.0e-239
Identities = 405/639 (63%), Positives = 507/639 (79%)
Query: 534 YYSIAHTVHEIVTEQASILVNG----KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKT 589
YY+ AH V E + EQ ++ G KLK YQIKGLEWMVSLFNNNLNGILADEMGLGKT
Sbjct: 339 YYTTAHGVREEIKEQHFMMGGGNPSLKLKPYQIKGLEWMVSLFNNNLNGILADEMGLGKT 398
Query: 590 IQTIALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA 649
IQTIA ITYLME KK +GPFL+IVPLST+ NW EF++WA +V+++AYKG RK +
Sbjct: 399 IQTIAFITYLMEIKKTSGPFLVIVPLSTVPNWQNEFDKWAANVHLIAYKGPKETRKVFEP 458
Query: 650 QMKASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHR 709
+K+ KFNVLLTT+EYVI++K L KL WKYMIIDEGHR+KN HCKLT +LNT + R
Sbjct: 459 IIKSGKFNVLLTTFEYVIREKALLGKLRWKYMIIDEGHRLKNQHCKLTEMLNTRFQCQRR 518
Query: 710 LLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIR 769
LL+TGTPLQNKLPELWALLNFLLPSIF S STFEQWFNAPFATTGEKVEL +EET+LIIR
Sbjct: 519 LLITGTPLQNKLPELWALLNFLLPSIFSSCSTFEQWFNAPFATTGEKVELTQEETMLIIR 578
Query: 770 RLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXX 829
RLHKVLRPFLLRRLKKEVES+LPDK+E++++CDMS LQKVLY+HM KG+LL DG
Sbjct: 579 RLHKVLRPFLLRRLKKEVESELPDKMEFVVRCDMSALQKVLYKHMQ-KGLLL-DGK---- 632
Query: 830 XXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDR 889
L NT++ LRKLCNHPF+F+N+EE + + +S DLYRVSGK ELL R
Sbjct: 633 -TNTGSKSLRNTMIHLRKLCNHPFLFENVEESCRNF-WDARFISAVDLYRVSGKLELLSR 690
Query: 890 ILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDS 949
ILPKL++TGHRVL+F QMT +M I+ED+ + +Y+RLDG+TK ++RG LL KFNAP+S
Sbjct: 691 ILPKLQATGHRVLMFFQMTSMMTIVEDFLAGGTIQYLRLDGSTKPDERGALLDKFNAPNS 750
Query: 950 EYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTV 1009
EYF+F+LSTRAGGLGLNLQTADTVIIFDSDWNPHQD+QAQDRAHRIGQK EVRV RL+T
Sbjct: 751 EYFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKAEVRVFRLITA 810
Query: 1010 NSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDD 1069
NSVEE+ILAAARYKLN+DEKVIQAG FD +STG+ER + L+ I+ ++E +E+E VP+D
Sbjct: 811 NSVEEKILAAARYKLNVDEKVIQAGKFDNRSTGAERREILENIIKTENESEEDEE-VPND 869
Query: 1070 ETVNQMLARSEEEFQTYQRIDAER-RKEQGKKS--RLIEVSELPDWLIKEDEEIEQWAFE 1126
E +N +L+RSEEEF+ +Q++D ER EQ +K+ RL+ E+P +++ +E + + +
Sbjct: 870 EDINDILSRSEEEFELFQKMDQERFENEQAQKAKPRLVGEDEIPRDILRAADETD-YIEK 928
Query: 1127 AKEEEKA--LHMGRGSRQ-RKQVDYT-DSLTEKEWLKAI 1161
AKEE + L + GSR+ R++VDY+ D++++ ++L+ +
Sbjct: 929 AKEEGRVPYLEVMPGSRRTRREVDYSADTMSDDKFLEKL 967
Score = 250 (93.1 bits), Expect = 7.0e-239, Sum P(3) = 7.0e-239
Identities = 60/205 (29%), Positives = 108/205 (52%)
Query: 197 LDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLRAE 256
+D II +E + +++ R L +L T PE + KA+IE L +L+FQ +LR +
Sbjct: 82 IDDDIIRKEALHYRDQDMKNREMYLKENL-HTFPEERQTKAKIEYLGLSLLDFQTELRKK 140
Query: 257 VIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTV 316
V+A + +N + +RTK + L+E + + E++++ + ++ ++
Sbjct: 141 VLATTVLVPPNDFLINPWSIRRTKYEYLQELK-----RHPDRAILEKRRKVTNFHFLQSL 195
Query: 317 LQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXXXXXXXLMAEDEEGYR 376
+H ++FKE+H+ N ++ K++ Y N L+ EDEEGYR
Sbjct: 196 TKHAREFKEFHKRNMLNHTKVRKSMQQYITNENKRIAREEMKNEKNRIQKLIQEDEEGYR 255
Query: 377 KLIDQKKDKRLAFLLSQTDEYISNL 401
++D+KKD+RL +LL QTD+YI +L
Sbjct: 256 AMLDEKKDQRLVYLLEQTDDYIKSL 280
Score = 68 (29.0 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 23/112 (20%), Positives = 54/112 (48%)
Query: 1023 KLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEE- 1081
K NM + D+K E+ + + +D +++E++ D + ++ +R +E
Sbjct: 1215 KFNMPSQETDGSKKDKKEPHKEKEKDKEKEKEEDKGKEKEKHKDKDKDKEHKKKSREDET 1274
Query: 1082 EFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKA 1133
E + R +A+R K Q ++ + ++L + L ++ + EQ E ++ E +
Sbjct: 1275 EEERRARKEAKRLKRQKEEQE--DDAKLQEKLARKAAKKEQKRLEKEKSESS 1324
Score = 50 (22.7 bits), Expect = 9.2e-218, Sum P(3) = 9.2e-218
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 274 KAYKRTKRQGL-KEARATEKLEKQQKV--EAERKKRQKHQEYITTVLQHCKDFKEYH 327
K+Y R + G+ +E + L+K + E E K + ++Y TT ++ KE H
Sbjct: 298 KSYIRKEYDGVAEEDKVKSILDKARNDDDEYENKTKMNIEDYYTTAHGVREEIKEQH 354
Score = 37 (18.1 bits), Expect = 7.0e-239, Sum P(3) = 7.0e-239
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 1115 KEDEEIEQWAFEAKEEEKALHMGRGS-RQRKQVDYTDSLTEKE 1156
++D+E E+ + KE+EK H + ++ K+ D TE+E
Sbjct: 1238 EKDKEKEKEEDKGKEKEK--HKDKDKDKEHKKKSREDE-TEEE 1277
>SGD|S000005816 [details] [associations]
symbol:SNF2 "Catalytic subunit of the SWI/SNF chromatin
remodeling complex" species:4932 "Saccharomyces cerevisiae"
[GO:0006261 "DNA-dependent DNA replication" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA;IMP] [GO:0006338
"chromatin remodeling" evidence=IGI;IMP] [GO:0031496 "positive
regulation of mating type switching" evidence=IMP] [GO:0031492
"nucleosomal DNA binding" evidence=IDA] [GO:0042766 "nucleosome
mobilization" evidence=IMP;IDA] [GO:0006302 "double-strand break
repair" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP;IDA]
[GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
[GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0070577
"histone acetyl-lysine binding" evidence=IMP;IDA] [GO:0042148
"strand invasion" evidence=IMP] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IMP] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00384 SMART:SM00490
SMART:SM00951 SGD:S000005816 GO:GO:0005524 EMBL:BK006948
GO:GO:0006351 GO:GO:0006261 GO:GO:0016514 GO:GO:0006302
GO:GO:0004386 GO:GO:0005987 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GeneTree:ENSGT00550000074659 InterPro:IPR014012
PROSITE:PS51204 EMBL:X89633 GO:GO:0008094 HOGENOM:HOG000172362
GO:GO:0031492 RefSeq:NP_014933.3 GeneID:854465 KEGG:sce:YOR290C
KO:K11786 GO:GO:0061412 GO:GO:0042148 OrthoDB:EOG4D565R EMBL:M61703
EMBL:X57837 EMBL:D90459 EMBL:Z75198 EMBL:Z75199 PIR:S15047
RefSeq:NP_014935.3 ProteinModelPortal:P22082 SMR:P22082
DIP:DIP-1150N IntAct:P22082 MINT:MINT-600461 STRING:P22082
PaxDb:P22082 PeptideAtlas:P22082 EnsemblFungi:YOR290C GeneID:854467
KEGG:sce:YOR292C CYGD:YOR290c OMA:HPNFLSK NextBio:976750
Genevestigator:P22082 GermOnline:YOR290C GO:GO:0044109
GO:GO:0031496 Uniprot:P22082
Length = 1703
Score = 1900 (673.9 bits), Expect = 1.1e-233, Sum P(5) = 1.1e-233
Identities = 373/638 (58%), Positives = 486/638 (76%)
Query: 534 YYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTI 593
YY++AH + E + +Q SILV G LK+YQIKGL+WMVSLFNN+LNGILADEMGLGKTIQTI
Sbjct: 744 YYNVAHRIKEDIKKQPSILVGGTLKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTI 803
Query: 594 ALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKA 653
+L+TYL E K + GP+L+IVPLSTLSNWS EF +WAP++ +++KGSP+ RK QA+++A
Sbjct: 804 SLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNERKAKQAKIRA 863
Query: 654 SKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLT 713
+F+V+LTT+EY+IK++ L+K+ W +MIIDEGHRMKN KL+ LNT Y A +RL+LT
Sbjct: 864 GEFDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLILT 923
Query: 714 GTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTG--EKVELNEEETILIIRRL 771
GTPLQN LPELWALLNF+LP IF SV +F++WFN PFA TG +K+EL+EEET+L+IRRL
Sbjct: 924 GTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETLLVIRRL 983
Query: 772 HKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXX 831
HKVLRPFLLRRLKK+VE +LPDKVE ++KC MS LQ+++Y+ M K L G +
Sbjct: 984 HKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQM-LKYRRLFIGDQNNKKM 1042
Query: 832 XXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRIL 891
N I+QL+K+CNHPF+F+ +E D + + + D++RV+GKFELLDRIL
Sbjct: 1043 VGLRG-FNNQIMQLKKICNHPFVFEEVE----DQINPTR-ETNDDIWRVAGKFELLDRIL 1096
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKLK+TGHRVL+F QMTQ+M+I+ED+ Y KY+RLDG TK+++R +LL+ FNAPDSEY
Sbjct: 1097 PKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEY 1156
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
F+LSTRAGGLGLNLQTADTVIIFD+DWNPHQDLQAQDRAHRIGQKNEVR+LRL+T NS
Sbjct: 1157 LCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNS 1216
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEED-------EEEN 1064
VEE IL A KL++D KVIQAG FD KST E+ L+++L ++E EEE
Sbjct: 1217 VEEVILERAYKKLDIDGKVIQAGKFDNKSTSEEQEALLRSLLDAEEERRKKRESGVEEEE 1276
Query: 1065 AVPDDETVNQMLARSEEEFQTYQRIDAERRKEQ---GKKSRLIEVSELPDWLIKEDEEIE 1121
+ D E +N++LAR++EE R+D +R K++ G KSRL+E SELPD + D E
Sbjct: 1277 ELKDSE-INEILARNDEEMAVLTRMDEDRSKKEEELGVKSRLLEKSELPD-IYSRDIGAE 1334
Query: 1122 QWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLK 1159
E+ E A++ GRG+R+RK Y D+++E++WL+
Sbjct: 1335 LKREES--ESAAVYNGRGARERKTATYNDNMSEEQWLR 1370
Score = 171 (65.3 bits), Expect = 1.1e-233, Sum P(5) = 1.1e-233
Identities = 37/89 (41%), Positives = 53/89 (59%)
Query: 1230 IKYTDSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDELQKDFK 1289
+ Y + GR LS+ F+ PS+ PDYY +I P+ I IE Y+S+ E +DF
Sbjct: 1562 LNYENEAGRKLSDIFLSKPSKALYPDYYMIIKYPVAFDNINTHIETLAYNSLKETLQDFH 1621
Query: 1290 TLCRNAQIYNEELSLIHEDSVVLESVFTK 1318
+ NA+IYN E S+++EDS+ LE V TK
Sbjct: 1622 LIFSNARIYNTEGSVVYEDSLELEKVVTK 1650
Score = 163 (62.4 bits), Expect = 1.1e-233, Sum P(5) = 1.1e-233
Identities = 54/214 (25%), Positives = 92/214 (42%)
Query: 194 PEGLDPLIILQERENRVALNIERRIEE-LNGSLTSTLPEHLRVKAEIELRALKVLNFQRQ 252
P G+D + +ALN++ + + L+ L E R A + AL++L Q+
Sbjct: 485 PVGIDTHTATDIYQTLIALNLDTTVNDCLDKLLNDECTESTRENALYDYYALQLLPLQKA 544
Query: 253 LRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKV-EAERKKRQKHQE 311
+R V+ +L T + + + +++A T +L K ++ + ERKK E
Sbjct: 545 VRGHVLQFEWHQNSLLTNTHPNFLSKIRNINVQDALLTNQLYKNHELLKLERKKT----E 600
Query: 312 YITTVLQHCKD-FKEYHRNNQARIMRLN--KAVMNYHANAXXXXXXXXXXXXXXXXXXLM 368
+ + K +Y+R + RL ++ H N L
Sbjct: 601 AVARLKSMNKSAINQYNRRQDKKNKRLKFGHRLIATHTNLERDEQKRAEKKAKERLQALK 660
Query: 369 AEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLT 402
A DEE Y KL+DQ KD R+ LL QT+ ++ +LT
Sbjct: 661 ANDEEAYIKLLDQTKDTRITHLLRQTNAFLDSLT 694
Score = 65 (27.9 bits), Expect = 5.7e-20, Sum P(5) = 5.7e-20
Identities = 28/117 (23%), Positives = 51/117 (43%)
Query: 1049 LQTILHQDDEE-------DEEENAVPDDETVNQMLARSEEEFQTYQR-IDAERRKEQGKK 1100
+ IL ++DEE DE+ + ++ V L E Y R I AE ++E+ +
Sbjct: 1283 INEILARNDEEMAVLTRMDEDRSKKEEELGVKSRLLEKSELPDIYSRDIGAELKREESES 1342
Query: 1101 SRLIE---VSELPDWLIKEDEEIEQWA--FEAKEEEKALHMGRGSRQRKQVDYTDSL 1152
+ + E ++ EQW FE ++EK R R +K+ D ++++
Sbjct: 1343 AAVYNGRGARERKTATYNDNMSEEQWLRQFEVSDDEKNDKQARKQRTKKE-DKSEAI 1398
Score = 43 (20.2 bits), Expect = 1.1e-233, Sum P(5) = 1.1e-233
Identities = 18/92 (19%), Positives = 40/92 (43%)
Query: 49 NPQENLTALQRA-IDSMKEQGLEEDPRYQKL-IEMKANRTEIKHAFTSAQVQQLRFQIMA 106
+P +Q+A + + Q ++ + Q+ ++ R FT+ Q + L+ QI +
Sbjct: 203 SPMPQQAQMQQAQFQAQQAQQAQQAQQAQQAQARLQQGRRLPMTMFTAEQSELLKAQITS 262
Query: 107 YRLLARNQPLTPQLAMGVQGKRMEGVPSGPQM 138
+ L +P+ + +Q K + P +M
Sbjct: 263 LKCLVNRKPIPFEFQAVIQ-KSINHPPDFKRM 293
Score = 40 (19.1 bits), Expect = 1.1e-233, Sum P(5) = 1.1e-233
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 180 SSQIKQSKLTNIPKPEGLDPLIILQER 206
+S ++ N PKP+ PL +LQ++
Sbjct: 407 NSNKTHTEQNNPPKPQKPVPLNVLQDQ 433
Score = 38 (18.4 bits), Expect = 1.5e-05, Sum P(4) = 1.5e-05
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 1046 HQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEE 1082
H+ + T H + E DE++ A + Q L ++EE
Sbjct: 631 HRLIAT--HTNLERDEQKRAEKKAKERLQALKANDEE 665
Score = 37 (18.1 bits), Expect = 7.0e-08, Sum P(4) = 7.0e-08
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 177 GHISSQIKQS--KLTNIPKPEGLDPLIILQERENRVALNIE 215
GH S + +L N P E L IL R + LN++
Sbjct: 1135 GHTKSDERSELLRLFNAPDSEYL--CFILSTRAGGLGLNLQ 1173
>POMBASE|SPCC1620.14c [details] [associations]
symbol:snf22 "ATP-dependent DNA helicase Snf22"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IC]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IGI] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEP] [GO:1900389 "regulation of glucose import
by regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:1900400 "regulation of iron ion import by
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR014978 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00384
SMART:SM00490 SMART:SM00951 PomBase:SPCC1620.14c GO:GO:0005524
GO:GO:0005819 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0045944 GO:GO:0000122 GO:GO:0000790 GO:GO:0016514
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0007131
InterPro:IPR014012 PROSITE:PS51204 GO:GO:0010972
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R EMBL:AB162437
PIR:T41628 RefSeq:NP_588472.2 ProteinModelPortal:O94421
DIP:DIP-48377N STRING:O94421 PRIDE:O94421
EnsemblFungi:SPCC1620.14c.1 GeneID:2538881 KEGG:spo:SPCC1620.14c
NextBio:20800061 GO:GO:1900389 GO:GO:1900400 Uniprot:O94421
Length = 1680
Score = 1865 (661.6 bits), Expect = 1.3e-233, Sum P(4) = 1.3e-233
Identities = 364/632 (57%), Positives = 476/632 (75%)
Query: 534 YYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTI 593
Y+ +AH +HE V EQ I V G LK+YQ+KGLEWM+SL+NNNLNGILADEMGLGKTIQTI
Sbjct: 847 YFKVAHRIHEEV-EQPKIFVGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTI 905
Query: 594 ALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKA 653
A ITYL+EKK GPFLIIVPLSTL+NW +EFE+WAPSV +AYKG P LRKTLQ+Q+++
Sbjct: 906 AFITYLIEKKNQQGPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQLRKTLQSQIRS 965
Query: 654 SKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLT 713
S FNVLLTT+EY+IKD+ L+++ W +MIIDEGHR+KN KLT L+T+Y + +RL+LT
Sbjct: 966 SNFNVLLTTFEYIIKDRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILT 1025
Query: 714 GTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTG--EKVELNEEETILIIRRL 771
GTPLQN LPELWALLNF+LP IF S+ +F++WFN PFA TG +K+ LNEEE +LII+RL
Sbjct: 1026 GTPLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANTGGQDKIGLNEEEALLIIKRL 1085
Query: 772 HKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXX 831
HKVLRPFL RRLKK+VE +LPDKVE +IKC +SGLQ LY+ M G+L DG +
Sbjct: 1086 HKVLRPFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKLYQQMKKHGMLFVDGEKGKTGI 1145
Query: 832 XXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRIL 891
L NT++QL+K+CNHPF+F+++E G+ + L+R +GKFELLDRIL
Sbjct: 1146 KG----LQNTVMQLKKICNHPFIFEDVERAIDP--SGTNVDL---LWRAAGKFELLDRIL 1196
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKL TGH+ L+F QMTQ+M I+EDY + +KY+RLDG+TK++DR LL +FN P S+
Sbjct: 1197 PKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKSDV 1256
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
+IF+LSTRAGGLGLNLQTADTVIIFD+DWNPHQDLQAQDRAHRIGQ EVR+LRL+T S
Sbjct: 1257 YIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEKS 1316
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEE--ENAVPDD 1069
+EE IL+ A+YKL++D KVIQAG FD KST ER FL+++L D ++D + + DD
Sbjct: 1317 IEENILSRAQYKLDLDGKVIQAGKFDNKSTPEEREAFLRSLLEHDGDDDHDLTYGELQDD 1376
Query: 1070 ETVNQMLARSEEEFQTYQRIDAERRKE----QGKK-SRLIEVSELPDWLIKEDEEIEQWA 1124
E +N++++R++EE ++++D ER +GK RL+ V+ELPD+ E++ +A
Sbjct: 1377 E-LNELISRTDEELVLFKKLDKERAATDIYGKGKPLERLLTVNELPDFY---KVEVDSFA 1432
Query: 1125 FEAKEEEKALHMGRGSRQRKQVDYTDSLTEKE 1156
++ E + ++ R R+R + YT+ LT E
Sbjct: 1433 VQSSSELEDQYLERKRRRRNSISYTE-LTLDE 1463
Score = 222 (83.2 bits), Expect = 1.3e-233, Sum P(4) = 1.3e-233
Identities = 59/203 (29%), Positives = 104/203 (51%)
Query: 207 ENRVALNIERRIEELNG-----SLTSTLPEHLRVKAEIELRALKVLNFQRQLRAEVIACA 261
E +A +I RI+ L S+ + + + K+ IELR L++L QR LR + +
Sbjct: 609 EIAIACSIANRIDFLEKENRPKSVNKKILQQDKSKSMIELRCLRLLEKQRSLRETINSVI 668
Query: 262 RRDTTLETAVNVKA-YKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHC 320
+L A N++ ++ KRQ ++EA L ++QK E ++++K ++ +++ H
Sbjct: 669 PHSDSL-AAGNLRLMFRNVKRQTMQEANLVLALAEKQKTEHAMRQKEKLLTHLRSIMLHR 727
Query: 321 KDF-KEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLI 379
K + + N+A+ R K ++N+HA+ L A+DE Y +L+
Sbjct: 728 KSIVTKVDKQNKAKTQRC-KDIINFHAHLEKEEKKRIERSARQRLQALRADDEAAYLQLL 786
Query: 380 DQKKDKRLAFLLSQTDEYISNLT 402
D+ KD R+ LL QTD+Y+ NLT
Sbjct: 787 DKAKDTRITHLLKQTDQYLENLT 809
Score = 168 (64.2 bits), Expect = 1.3e-233, Sum P(4) = 1.3e-233
Identities = 34/89 (38%), Positives = 54/89 (60%)
Query: 1236 DGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDELQKDFKTLCRNA 1295
DGR ++ F+ P+RK PDYY +I RP+ + KI I++ +Y V EL DF + NA
Sbjct: 1536 DGRFVNGLFLYPPNRKLYPDYYIIIKRPIALGKIKRNIKNDRYGDVGELIADFMLMFNNA 1595
Query: 1296 QIYNEELSLIHEDSVVLESVFTKARQRVE 1324
YNEE S+++ED+ ++E + + +E
Sbjct: 1596 YTYNEEHSIVYEDAKLMEKTLKEVIEDLE 1624
Score = 51 (23.0 bits), Expect = 1.3e-233, Sum P(4) = 1.3e-233
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 95 AQVQQLRFQIMAYRLL-ARNQPLTPQLAMGVQGKRMEGVPS--GPQMP 139
AQ+ L+ QI+AY L + N + P + + G R+ G + P MP
Sbjct: 433 AQLAMLKSQIVAYNCLNSPNGQVPPAVQQAIFG-RVYGASNEVSPSMP 479
Score = 46 (21.3 bits), Expect = 9.7e-221, Sum P(4) = 9.7e-221
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 1233 TDSDGRVLSEPFIKLPSRKELPDYYEV 1259
TD G+ +P +L + ELPD+Y+V
Sbjct: 1402 TDIYGK--GKPLERLLTVNELPDFYKV 1426
>CGD|CAL0005444 [details] [associations]
symbol:SNF2 species:5476 "Candida albicans" [GO:0016514
"SWI/SNF complex" evidence=IPI] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:1900430 "positive regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900442 "positive regulation of filamentous growth of a
population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0042766 "nucleosome mobilization" evidence=IEA]
[GO:0005987 "sucrose catabolic process" evidence=IEA] [GO:1900231
"regulation of single-species biofilm formation on inanimate
substrate" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042148 "strand invasion"
evidence=IEA] [GO:0044109 "cellular alcohol catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0031496 "positive regulation of mating type
switching" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IEA] [GO:0036244 "cellular response to
neutral pH" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 1918 (680.2 bits), Expect = 6.5e-232, Sum P(4) = 6.5e-232
Identities = 375/643 (58%), Positives = 480/643 (74%)
Query: 530 EEATYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKT 589
E+ YY++AH + E VT+Q SILV G LKEYQ+KGL+WMVSLFNN+LNGILADEMGLGKT
Sbjct: 754 EKIDYYNVAHRIKEEVTKQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKT 813
Query: 590 IQTIALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA 649
IQTI+L+TYL+E KK+ GPFL+IVPLST++NW+LEFE+WAPS+ + YKG+P+ RK +Q
Sbjct: 814 IQTISLLTYLVEVKKIPGPFLVIVPLSTVTNWNLEFEKWAPSIKKITYKGTPNQRKVMQH 873
Query: 650 QMKASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHR 709
++ F ++LTT+EYVIKDKG L ++ W +MIIDEGHRMKN + KL+ L Y + +R
Sbjct: 874 DIRTGNFQLVLTTFEYVIKDKGLLGRIKWVHMIIDEGHRMKNANSKLSETLTQNYHSDYR 933
Query: 710 LLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTG--EKVELNEEETILI 767
L+LTGTPLQN LPELWALLNF+LP IF SV +F++WFN PFA TG +K+EL EEET+L+
Sbjct: 934 LILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELTEEETLLV 993
Query: 768 IRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEX 827
IRRLHKVLRPFLLRRLKK+VE LP+KVE ++KC S LQ LY+ M +L G
Sbjct: 994 IRRLHKVLRPFLLRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQMLRYNMLYA-GDPA 1052
Query: 828 XXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELL 887
N I+QL+K+CNHPF+++ +E + + I + ++RV+GKFELL
Sbjct: 1053 NGSVPVTIKNANNQIMQLKKICNHPFVYEEVENLINPN-----IETNDQIWRVAGKFELL 1107
Query: 888 DRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAP 947
D++LPK K+TGH+VL+F QMTQ+MNI+ED+ +RG KYMRLDG TKA+DR DLLK FNAP
Sbjct: 1108 DKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLLKSFNAP 1167
Query: 948 DSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLM 1007
DS+YF F+LSTRAGGLGLNLQTADTVIIFD+DWNPHQDLQAQDRAHRIGQKNEVR+LRL+
Sbjct: 1168 DSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLI 1227
Query: 1008 TVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE------DE 1061
T NSVEE IL A KL +D KVIQAG FD KST E+ L+ ++ ++DE DE
Sbjct: 1228 TENSVEEMILERAHKKLEIDGKVIQAGKFDNKSTAEEQEAMLRALIEKEDERRQKGGTDE 1287
Query: 1062 EENAVPDDETVNQMLARSEEEFQTYQRIDAER---RKEQGKKSRLIEVSELPDWLIKEDE 1118
EE + DDE +NQ++AR+E E ++++D ER K SRL ELP+ + E
Sbjct: 1288 EEEDLDDDE-LNQIIARNENELVVFRKMDEERYLATKNAPYPSRLYTEEELPEIYKIDPE 1346
Query: 1119 EIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
E+ F+ KE+ + GRG+R+RK + Y D+LTE++WLK I
Sbjct: 1347 EL----FK-KEDVASEEYGRGARERKILQYDDNLTEEQWLKKI 1384
Score = 164 (62.8 bits), Expect = 6.5e-232, Sum P(4) = 6.5e-232
Identities = 35/107 (32%), Positives = 58/107 (54%)
Query: 1225 IMRVVIKYTDSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDEL 1284
I+ ++I Y + RVLSE F+ P ++ PDYY +I P+ + I R YS + E
Sbjct: 1520 ILGLIINYKNEHDRVLSELFLVKPPKRFYPDYYVLIKHPIALDVIKKRTASKSYSKIREF 1579
Query: 1285 QKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+D + NA+IYNEE S++++D+ LE + + + + DE
Sbjct: 1580 LEDIHLMFTNAKIYNEEGSIVYQDAAFLERLSMDKFKELSANLSEDE 1626
Score = 160 (61.4 bits), Expect = 6.5e-232, Sum P(4) = 6.5e-232
Identities = 53/223 (23%), Positives = 95/223 (42%)
Query: 185 QSKLTNIPK--PEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIE-- 240
QS+ IP P+G++ I RE + + IE+ E L + S + K E+E
Sbjct: 499 QSRF-QIPSFLPDGINMEDIYVNREGYMQITIEQEKERLRKQIDSLNEKDTEKKLELETQ 557
Query: 241 LRALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVE 300
L L+++ +Q+ LR +V+ + +L + R + T L + Q
Sbjct: 558 LSQLELIPYQKDLRGKVLIQSWFGKSLLPNSHPNFLARFSSLSMDSVHMTTDLYRLQLES 617
Query: 301 AERKKRQKHQEYITTVLQHC--KDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXX 358
R++ +KH + I ++ K +++ R+ R + N+H
Sbjct: 618 MMREQNKKHGKTIEEIISFSDRSSIKAVKKSD--RLSRFMTKINNFHNQTAKEEQKKLEK 675
Query: 359 XXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNL 401
L + DEE Y KL+D KD R+ LL QT++++ +L
Sbjct: 676 MAKQRLQALKSNDEEAYLKLLDHTKDTRITHLLEQTNQFLDSL 718
Score = 48 (22.0 bits), Expect = 6.5e-232, Sum P(4) = 6.5e-232
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 64 MKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQQLRFQIMAYRLLAR 112
M Q ++ P+ Q+ + + AFT+ Q Q L+ Q+ A++ R
Sbjct: 195 MLNQTAQQPPQSQQ--RQQNQPPSPQSAFTNQQFQLLKSQLQAFKYFVR 241
Score = 47 (21.6 bits), Expect = 5.3e-220, Sum P(4) = 5.3e-220
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 277 KRTKRQGLKEARATEKLEKQ-QKVEAERKKRQKHQEY 312
K TK+Q L+E LEKQ Q++E R K Q +
Sbjct: 338 KPTKKQ-LREEEQRLALEKQRQELEQNRLKSSAPQAF 373
Score = 45 (20.9 bits), Expect = 8.6e-220, Sum P(4) = 8.6e-220
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 203 LQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRA 243
L+E E R+AL +R+ E N L S+ P+ +A ++ +A
Sbjct: 344 LREEEQRLALEKQRQELEQN-RLKSSAPQAFPPQAGLQGQA 383
Score = 44 (20.5 bits), Expect = 5.7e-216, Sum P(3) = 5.7e-216
Identities = 11/61 (18%), Positives = 35/61 (57%)
Query: 250 QRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKH 309
Q QL E + + TL+ + + +++ +Q ++ + ++ ++QQ+ + +++++Q+
Sbjct: 27 QVQLNPEFVKLTKFLNTLK--MQQQRFQQQYQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 84
Query: 310 Q 310
Q
Sbjct: 85 Q 85
Score = 42 (19.8 bits), Expect = 9.3e-216, Sum P(3) = 9.3e-216
Identities = 8/39 (20%), Positives = 24/39 (61%)
Query: 273 VKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQE 311
VK K +++ R ++ ++QQ+ + +++++Q+ Q+
Sbjct: 35 VKLTKFLNTLKMQQQRFQQQYQQQQQQQQQQQQQQQQQQ 73
Score = 40 (19.1 bits), Expect = 1.5e-215, Sum P(3) = 1.5e-215
Identities = 6/35 (17%), Positives = 25/35 (71%)
Query: 277 KRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQE 311
+R ++Q ++ + ++ ++QQ+ + +++++Q+ Q+
Sbjct: 49 QRFQQQYQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 83
Score = 39 (18.8 bits), Expect = 1.9e-215, Sum P(3) = 1.9e-215
Identities = 6/39 (15%), Positives = 26/39 (66%)
Query: 273 VKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQE 311
+K ++ +Q ++ + ++ ++QQ+ + +++++Q+ Q+
Sbjct: 44 LKMQQQRFQQQYQQQQQQQQQQQQQQQQQQQQQQQQQQQ 82
Score = 38 (18.4 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 1228 VVIKYTDSDGRVLSEPFIKLPSR----KELPDYYEVIDRPMDIKKILGRIEDGK 1277
VV + D + R L+ PSR +ELP+ Y++ + K+ + E G+
Sbjct: 1309 VVFRKMDEE-RYLATKNAPYPSRLYTEEELPEIYKIDPEELFKKEDVASEEYGR 1361
>UNIPROTKB|Q5AM49 [details] [associations]
symbol:SNF2 "Putative uncharacterized protein SNF2"
species:237561 "Candida albicans SC5314" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=IPI] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036244 "cellular
response to neutral pH" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:1900430 "positive regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900442
"positive regulation of filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 1918 (680.2 bits), Expect = 6.5e-232, Sum P(4) = 6.5e-232
Identities = 375/643 (58%), Positives = 480/643 (74%)
Query: 530 EEATYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKT 589
E+ YY++AH + E VT+Q SILV G LKEYQ+KGL+WMVSLFNN+LNGILADEMGLGKT
Sbjct: 754 EKIDYYNVAHRIKEEVTKQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKT 813
Query: 590 IQTIALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA 649
IQTI+L+TYL+E KK+ GPFL+IVPLST++NW+LEFE+WAPS+ + YKG+P+ RK +Q
Sbjct: 814 IQTISLLTYLVEVKKIPGPFLVIVPLSTVTNWNLEFEKWAPSIKKITYKGTPNQRKVMQH 873
Query: 650 QMKASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHR 709
++ F ++LTT+EYVIKDKG L ++ W +MIIDEGHRMKN + KL+ L Y + +R
Sbjct: 874 DIRTGNFQLVLTTFEYVIKDKGLLGRIKWVHMIIDEGHRMKNANSKLSETLTQNYHSDYR 933
Query: 710 LLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTG--EKVELNEEETILI 767
L+LTGTPLQN LPELWALLNF+LP IF SV +F++WFN PFA TG +K+EL EEET+L+
Sbjct: 934 LILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELTEEETLLV 993
Query: 768 IRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEX 827
IRRLHKVLRPFLLRRLKK+VE LP+KVE ++KC S LQ LY+ M +L G
Sbjct: 994 IRRLHKVLRPFLLRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQMLRYNMLYA-GDPA 1052
Query: 828 XXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELL 887
N I+QL+K+CNHPF+++ +E + + I + ++RV+GKFELL
Sbjct: 1053 NGSVPVTIKNANNQIMQLKKICNHPFVYEEVENLINPN-----IETNDQIWRVAGKFELL 1107
Query: 888 DRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAP 947
D++LPK K+TGH+VL+F QMTQ+MNI+ED+ +RG KYMRLDG TKA+DR DLLK FNAP
Sbjct: 1108 DKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLLKSFNAP 1167
Query: 948 DSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLM 1007
DS+YF F+LSTRAGGLGLNLQTADTVIIFD+DWNPHQDLQAQDRAHRIGQKNEVR+LRL+
Sbjct: 1168 DSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLI 1227
Query: 1008 TVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE------DE 1061
T NSVEE IL A KL +D KVIQAG FD KST E+ L+ ++ ++DE DE
Sbjct: 1228 TENSVEEMILERAHKKLEIDGKVIQAGKFDNKSTAEEQEAMLRALIEKEDERRQKGGTDE 1287
Query: 1062 EENAVPDDETVNQMLARSEEEFQTYQRIDAER---RKEQGKKSRLIEVSELPDWLIKEDE 1118
EE + DDE +NQ++AR+E E ++++D ER K SRL ELP+ + E
Sbjct: 1288 EEEDLDDDE-LNQIIARNENELVVFRKMDEERYLATKNAPYPSRLYTEEELPEIYKIDPE 1346
Query: 1119 EIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
E+ F+ KE+ + GRG+R+RK + Y D+LTE++WLK I
Sbjct: 1347 EL----FK-KEDVASEEYGRGARERKILQYDDNLTEEQWLKKI 1384
Score = 164 (62.8 bits), Expect = 6.5e-232, Sum P(4) = 6.5e-232
Identities = 35/107 (32%), Positives = 58/107 (54%)
Query: 1225 IMRVVIKYTDSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDEL 1284
I+ ++I Y + RVLSE F+ P ++ PDYY +I P+ + I R YS + E
Sbjct: 1520 ILGLIINYKNEHDRVLSELFLVKPPKRFYPDYYVLIKHPIALDVIKKRTASKSYSKIREF 1579
Query: 1285 QKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVESGEDPDE 1331
+D + NA+IYNEE S++++D+ LE + + + + DE
Sbjct: 1580 LEDIHLMFTNAKIYNEEGSIVYQDAAFLERLSMDKFKELSANLSEDE 1626
Score = 160 (61.4 bits), Expect = 6.5e-232, Sum P(4) = 6.5e-232
Identities = 53/223 (23%), Positives = 95/223 (42%)
Query: 185 QSKLTNIPK--PEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIE-- 240
QS+ IP P+G++ I RE + + IE+ E L + S + K E+E
Sbjct: 499 QSRF-QIPSFLPDGINMEDIYVNREGYMQITIEQEKERLRKQIDSLNEKDTEKKLELETQ 557
Query: 241 LRALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVE 300
L L+++ +Q+ LR +V+ + +L + R + T L + Q
Sbjct: 558 LSQLELIPYQKDLRGKVLIQSWFGKSLLPNSHPNFLARFSSLSMDSVHMTTDLYRLQLES 617
Query: 301 AERKKRQKHQEYITTVLQHC--KDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXX 358
R++ +KH + I ++ K +++ R+ R + N+H
Sbjct: 618 MMREQNKKHGKTIEEIISFSDRSSIKAVKKSD--RLSRFMTKINNFHNQTAKEEQKKLEK 675
Query: 359 XXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNL 401
L + DEE Y KL+D KD R+ LL QT++++ +L
Sbjct: 676 MAKQRLQALKSNDEEAYLKLLDHTKDTRITHLLEQTNQFLDSL 718
Score = 48 (22.0 bits), Expect = 6.5e-232, Sum P(4) = 6.5e-232
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 64 MKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQQLRFQIMAYRLLAR 112
M Q ++ P+ Q+ + + AFT+ Q Q L+ Q+ A++ R
Sbjct: 195 MLNQTAQQPPQSQQ--RQQNQPPSPQSAFTNQQFQLLKSQLQAFKYFVR 241
Score = 47 (21.6 bits), Expect = 5.3e-220, Sum P(4) = 5.3e-220
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 277 KRTKRQGLKEARATEKLEKQ-QKVEAERKKRQKHQEY 312
K TK+Q L+E LEKQ Q++E R K Q +
Sbjct: 338 KPTKKQ-LREEEQRLALEKQRQELEQNRLKSSAPQAF 373
Score = 45 (20.9 bits), Expect = 8.6e-220, Sum P(4) = 8.6e-220
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 203 LQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRA 243
L+E E R+AL +R+ E N L S+ P+ +A ++ +A
Sbjct: 344 LREEEQRLALEKQRQELEQN-RLKSSAPQAFPPQAGLQGQA 383
Score = 44 (20.5 bits), Expect = 5.7e-216, Sum P(3) = 5.7e-216
Identities = 11/61 (18%), Positives = 35/61 (57%)
Query: 250 QRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKH 309
Q QL E + + TL+ + + +++ +Q ++ + ++ ++QQ+ + +++++Q+
Sbjct: 27 QVQLNPEFVKLTKFLNTLK--MQQQRFQQQYQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 84
Query: 310 Q 310
Q
Sbjct: 85 Q 85
Score = 42 (19.8 bits), Expect = 9.3e-216, Sum P(3) = 9.3e-216
Identities = 8/39 (20%), Positives = 24/39 (61%)
Query: 273 VKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQE 311
VK K +++ R ++ ++QQ+ + +++++Q+ Q+
Sbjct: 35 VKLTKFLNTLKMQQQRFQQQYQQQQQQQQQQQQQQQQQQ 73
Score = 40 (19.1 bits), Expect = 1.5e-215, Sum P(3) = 1.5e-215
Identities = 6/35 (17%), Positives = 25/35 (71%)
Query: 277 KRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQE 311
+R ++Q ++ + ++ ++QQ+ + +++++Q+ Q+
Sbjct: 49 QRFQQQYQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 83
Score = 39 (18.8 bits), Expect = 1.9e-215, Sum P(3) = 1.9e-215
Identities = 6/39 (15%), Positives = 26/39 (66%)
Query: 273 VKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQE 311
+K ++ +Q ++ + ++ ++QQ+ + +++++Q+ Q+
Sbjct: 44 LKMQQQRFQQQYQQQQQQQQQQQQQQQQQQQQQQQQQQQ 82
Score = 38 (18.4 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 1228 VVIKYTDSDGRVLSEPFIKLPSR----KELPDYYEVIDRPMDIKKILGRIEDGK 1277
VV + D + R L+ PSR +ELP+ Y++ + K+ + E G+
Sbjct: 1309 VVFRKMDEE-RYLATKNAPYPSRLYTEEELPEIYKIDPEELFKKEDVASEEYGR 1361
>CGD|CAL0003962 [details] [associations]
symbol:orf19.239 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0015616
"DNA translocase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0003962 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
EMBL:AACQ01000027 EMBL:AACQ01000026 InterPro:IPR014012
PROSITE:PS51204 KO:K11786 RefSeq:XP_719938.1 RefSeq:XP_720068.1
ProteinModelPortal:Q5AEM9 STRING:Q5AEM9 GeneID:3638290
GeneID:3638351 KEGG:cal:CaO19.239 KEGG:cal:CaO19.7869
Uniprot:Q5AEM9
Length = 1303
Score = 1912 (678.1 bits), Expect = 1.2e-230, Sum P(3) = 1.2e-230
Identities = 384/636 (60%), Positives = 481/636 (75%)
Query: 530 EEATYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKT 589
E+ YY +AH + E +TEQ +ILV GKLKEYQ+KGLEWMVSL+NN+LNGILADEMGLGKT
Sbjct: 474 EKTDYYEVAHRIKEKITEQPTILVGGKLKEYQMKGLEWMVSLYNNHLNGILADEMGLGKT 533
Query: 590 IQTIALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA 649
IQ+I+L+TYL+EKK N FLIIVPLST++NW+LEFE+WAPS+ V+ YKGS R++LQ
Sbjct: 534 IQSISLVTYLIEKKHEN-KFLIIVPLSTITNWTLEFEKWAPSIKVIVYKGSQQQRRSLQP 592
Query: 650 QMKASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHR 709
++ F VLLTTYEYVI+++ LAK H+ +MIIDEGHRMKN KL+ L T+Y +R
Sbjct: 593 DIRYGNFQVLLTTYEYVIRERPMLAKFHYSHMIIDEGHRMKNAQSKLSQTLRTYYKTKNR 652
Query: 710 LLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTG--EKVELNEEETILI 767
L+LTGTPLQN LPELWALLNF+LP IF SV +F+ WFN PFA TG EK+EL EEE++L+
Sbjct: 653 LILTGTPLQNNLPELWALLNFVLPGIFNSVKSFDDWFNTPFANTGAQEKIELTEEESLLV 712
Query: 768 IRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEX 827
IRRLHKVLRPFLLRRLKK+VE LPDKVE ++KC++SGLQ VLY+ M L G++
Sbjct: 713 IRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCNLSGLQYVLYQQMLKHNALFV-GADV 771
Query: 828 XXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELL 887
L N I+QLRK+CNHPF+F+ +E V S ++ ++RVSGKFELL
Sbjct: 772 GGAKSGIKG-LNNKIMQLRKICNHPFVFEEVES-----VLNSSRLTNDLIWRVSGKFELL 825
Query: 888 DRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAP 947
DR+LPK K +GHRVL+F QMTQ+M+I+ED+ ++ KY+RLDG+TKAE+R D+LK FNAP
Sbjct: 826 DRVLPKFKKSGHRVLMFFQMTQIMDIMEDFLRWKDMKYLRLDGSTKAEERQDMLKVFNAP 885
Query: 948 DSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLM 1007
DS+YF F+LSTRAGGLGLNLQTADTVIIFD+DWNPHQDLQAQDRAHRIGQKNEVR+LRL+
Sbjct: 886 DSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLI 945
Query: 1008 TVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQD-DEEDEEENAV 1066
T +SVEE IL A KL++D KVIQAG FD KST E+ FL+ +L D + D EEN
Sbjct: 946 TNDSVEEVILERAHQKLDIDGKVIQAGKFDNKSTAEEQEAFLKRLLEADANGADNEENDS 1005
Query: 1067 PDDETVNQMLARSEEEFQTYQRIDAERRKEQGK-KSRLIEVSELPDWLIKEDEEIEQWAF 1125
DD+ +N++LARSEEE + +D ER+ E+ KSRLIE ELP + ED I F
Sbjct: 1006 LDDDELNEILARSEEEKVLFASMDEERKSEKVPYKSRLIEKDELPA-VFTED--ISHH-F 1061
Query: 1126 EAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
E KE+E + R +K+V Y D L+E++WLKA+
Sbjct: 1062 EKKEKELSK-----MRDKKRVRYDDGLSEEQWLKAM 1092
Score = 191 (72.3 bits), Expect = 1.2e-230, Sum P(3) = 1.2e-230
Identities = 33/82 (40%), Positives = 56/82 (68%)
Query: 1234 DSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDELQKDFKTLCR 1293
++DG LS+ FIKLPSRK PDYY +I +P+ I ++ +++ K++S ++ + K +C
Sbjct: 1213 ETDGHNLSDIFIKLPSRKLYPDYYSIIKKPVSINQVKKQLDQEKFASFEDFIAELKQMCL 1272
Query: 1294 NAQIYNEELSLIHEDSVVLESV 1315
NA+ YN+E S +H D+ V+E +
Sbjct: 1273 NAKTYNQEGSFVHTDATVIEKL 1294
Score = 162 (62.1 bits), Expect = 1.2e-230, Sum P(3) = 1.2e-230
Identities = 51/184 (27%), Positives = 90/184 (48%)
Query: 231 EHLRVKAEIELRALKVLNFQRQLRAEVIACARR-----DTTLETAVNVKAYKRTKRQGLK 285
+ +++A IEL+AL++L Q+ LR ++ + D L++ + KR+ K
Sbjct: 253 DKFKIQALIELKALRLLGKQKLLRHNILVHEAQQVKYADPNLKSLPLALSEKRSFNVRPK 312
Query: 286 -EARATE----KLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKE--YHRNNQARIMRLN 338
E R + +LE+ +K+EA KR++H E + V++ E Y R++ R L
Sbjct: 313 IEQRNPQLLAVQLEELKKLEAREAKRKQHIEKVDLVVEKSTSRSEAKYVRDHY-RSHYLV 371
Query: 339 KAVMNYHANAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI 398
+ + N+H L + DEE Y KL+D+ KD R+ LL QT++++
Sbjct: 372 RQINNFHQTTEKEESKKLERTAKQRLQALRSNDEEAYLKLLDKTKDHRITHLLKQTNQFL 431
Query: 399 SNLT 402
+LT
Sbjct: 432 DSLT 435
Score = 67 (28.6 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 40/164 (24%), Positives = 73/164 (44%)
Query: 981 NPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKS 1040
N D D + I ++E +++ + EER YK + EK +F +
Sbjct: 1000 NEENDSLDDDELNEILARSEEE--KVLFASMDEERKSEKVPYKSRLIEKDELPAVFTEDI 1057
Query: 1041 TG--SERHQFLQTI-----LHQDDEEDEEE--NAVPDD-ETVNQMLARSEEEFQTYQRID 1090
+ ++ + L + + DD EE+ A+ DD +TV + + R EE RI
Sbjct: 1058 SHHFEKKEKELSKMRDKKRVRYDDGLSEEQWLKAMDDDNDTVEEAIKRKEE------RI- 1110
Query: 1091 AERRKEQGKKSRLIEVSELPDWLIKEDEE-IEQWAFEAKEEEKA 1133
A+R++ + + L+E D + +ED+E E+ A K + +A
Sbjct: 1111 AKRKRNKAIREGLLEEDIKDDEVGEEDDEDFEEAAQPRKRQRRA 1154
Score = 52 (23.4 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 13/48 (27%), Positives = 27/48 (56%)
Query: 1265 DIKKILGRIEDGK--YSSVDELQKDFKTLCRNAQIYNEELSLIHEDSV 1310
++ +IL R E+ K ++S+DE +K K ++ I +EL + + +
Sbjct: 1010 ELNEILARSEEEKVLFASMDEERKSEKVPYKSRLIEKDELPAVFTEDI 1057
Score = 48 (22.0 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 21/93 (22%), Positives = 42/93 (45%)
Query: 1070 ETVNQMLARSEEEFQTYQRIDAERRKEQGK-KSRLIEVSELPDWLIKEDEEIEQWAFEAK 1128
E + ++ AR + Q +++D K + +++ + +L+++ Q K
Sbjct: 326 EELKKLEAREAKRKQHIEKVDLVVEKSTSRSEAKYVRDHYRSHYLVRQINNFHQTT--EK 383
Query: 1129 EEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
EE K L R ++QR Q S E+ +LK +
Sbjct: 384 EESKKLE--RTAKQRLQA--LRSNDEEAYLKLL 412
Score = 44 (20.5 bits), Expect = 3.5e-218, Sum P(3) = 3.5e-218
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 553 VNGKLKEYQIKGLEWMVSLFNNNLNGILADE 583
V+ + +EY E+M LF+ NL G + E
Sbjct: 97 VSKEHEEYIKDESEFMQELFSENLKGTIKSE 127
>SGD|S000001388 [details] [associations]
symbol:STH1 "ATPase component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IGI;IMP] [GO:0031055 "chromatin remodeling at centromere"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IGI]
[GO:0016586 "RSC complex" evidence=IDA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0015616 "DNA translocase activity" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SGD:S000001388 GO:GO:0005524 GO:GO:0007126 GO:GO:0000086
GO:GO:0007010 GO:GO:0007059 GO:GO:0000775 GO:GO:0006355
EMBL:BK006942 GO:GO:0006302 GO:GO:0004386 GO:GO:0006368
GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0043044 GO:GO:0016584
EMBL:DQ115392 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 EMBL:Z46833 InterPro:IPR014012
PROSITE:PS51204 GeneTree:ENSGT00670000098110 HOGENOM:HOG000172362
GO:GO:0015616 GO:GO:0031055 KO:K11786 OrthoDB:EOG4D565R EMBL:D10595
EMBL:M83755 PIR:S49883 RefSeq:NP_012140.1 ProteinModelPortal:P32597
SMR:P32597 DIP:DIP-5889N IntAct:P32597 MINT:MINT-615490
STRING:P32597 PaxDb:P32597 PeptideAtlas:P32597 EnsemblFungi:YIL126W
GeneID:854680 KEGG:sce:YIL126W CYGD:YIL126w OMA:MEDFLRM
NextBio:977286 Genevestigator:P32597 GermOnline:YIL126W
Uniprot:P32597
Length = 1359
Score = 1885 (668.6 bits), Expect = 1.1e-225, Sum P(3) = 1.1e-225
Identities = 380/644 (59%), Positives = 479/644 (74%)
Query: 530 EEATYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKT 589
E+ YY +AH + E + +Q SILV G LKEYQ++GLEWMVSL+NN+LNGILADEMGLGKT
Sbjct: 443 EKTDYYEVAHRIKEKIDKQPSILVGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKT 502
Query: 590 IQTIALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA 649
IQ+I+LITYL E KK GPFL+IVPLST++NW+LEFE+WAPS+N + YKG+P+ R +LQ
Sbjct: 503 IQSISLITYLYEVKKDIGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSLQH 562
Query: 650 QMKASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHR 709
Q++ F+VLLTTYEY+IKDK L+K W +MIIDEGHRMKN KL+ ++ +Y +R
Sbjct: 563 QIRVGNFDVLLTTYEYIIKDKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNR 622
Query: 710 LLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTG--EKVELNEEETILI 767
L+LTGTPLQN LPELWALLNF+LP IF S TFE WFN PFA TG EK+EL EEET+LI
Sbjct: 623 LILTGTPLQNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLI 682
Query: 768 IRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEX 827
IRRLHKVLRPFLLRRLKKEVE LPDKVE +IKC +SGLQ+ LY+ M L G+
Sbjct: 683 IRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKHNALFV-GAGT 741
Query: 828 XXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELL 887
L N I+QLRK+CNHPF+F +E + G S + L+RV+GKFELL
Sbjct: 742 EGATKGGIKGLNNKIMQLRKICNHPFVFDEVEGVVNPSRGNSDL-----LFRVAGKFELL 796
Query: 888 DRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAP 947
DR+LPK K++GHRVL+F QMTQ+M+I+ED+ + KYMRLDG+TK E+R ++L FNAP
Sbjct: 797 DRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAP 856
Query: 948 DSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLM 1007
DS+YF F+LSTRAGGLGLNLQTADTVIIFD+DWNPHQDLQAQDRAHRIGQKNEVR+LRL+
Sbjct: 857 DSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLI 916
Query: 1008 TVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVP 1067
T +SVEE IL A KL++D KVIQAG FD KST E+ FL+ ++ + D+++ A
Sbjct: 917 TTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAEEQEAFLRRLIESETNRDDDDKAEL 976
Query: 1068 DDETVNQMLARSEEEFQTYQRIDAERR-------KEQGKK---SRLIEVSELPDWLIKED 1117
DD+ +N LARS +E + +ID ER K QG + RLI++ ELP + +ED
Sbjct: 977 DDDELNDTLARSADEKILFDKIDKERMNQERADAKAQGLRVPPPRLIQLDELPK-VFRED 1035
Query: 1118 EEIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
IE+ F+ KE+ + L GR RQ+K+V Y D LTE+++L+A+
Sbjct: 1036 --IEEH-FK-KEDSEPL--GR-IRQKKRVYYDDGLTEEQFLEAV 1072
Score = 177 (67.4 bits), Expect = 1.1e-225, Sum P(3) = 1.1e-225
Identities = 48/186 (25%), Positives = 88/186 (47%)
Query: 227 STLPEHLRVKAEIELRALKVLNFQRQLRAEVI--ACAR--------RDTTLETAVNVKAY 276
S+ + ++KA +EL++LK+L Q+ +R ++I ++ RD+ A
Sbjct: 231 SSRMDTFKIKALVELKSLKLLTKQKSIRQKLINNVASQAHHNIPYLRDSPFTAAAQRSVQ 290
Query: 277 KRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMR 336
R+K + R E+LE+QQ +E +K+R H + I +++ K+ + + Q R +
Sbjct: 291 IRSKVIVPQTVRLAEELERQQLLEKRKKERNLHLQKINSIIDFIKERQSEQWSRQERCFQ 350
Query: 337 LNKAVMNYHANAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDE 396
+ + H L + DEE Y KL+DQ KD R+ LL QT+
Sbjct: 351 FGRLGASLHNQMEKDEQKRIERTAKQRLAALKSNDEEAYLKLLDQTKDTRITQLLRQTNS 410
Query: 397 YISNLT 402
++ +L+
Sbjct: 411 FLDSLS 416
Score = 156 (60.0 bits), Expect = 1.1e-225, Sum P(3) = 1.1e-225
Identities = 35/92 (38%), Positives = 58/92 (63%)
Query: 1226 MRVVIKYTDSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDELQ 1285
MR + DS R + F KLPS+++ PDY++VI++PM I IL ++G Y +++E++
Sbjct: 1262 MREQLDEVDSHPR--TSIFEKLPSKRDYPDYFKVIEKPMAIDIILKNCKNGTYKTLEEVR 1319
Query: 1286 KDFKTLCRNAQIYNEELSLIHEDSVVLESVFT 1317
+ +T+ NA+ YNEE S ++ D+ L FT
Sbjct: 1320 QALQTMFENARFYNEEGSWVYVDADKLNE-FT 1350
Score = 62 (26.9 bits), Expect = 6.5e-21, Sum P(3) = 6.5e-21
Identities = 42/180 (23%), Positives = 69/180 (38%)
Query: 975 IFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAG 1034
+F D H + + RI QK V +T EE+ L A D+ +
Sbjct: 1031 VFREDIEEHFKKEDSEPLGRIRQKKRVYYDDGLT----EEQFLEAVE-----DDNMSLED 1081
Query: 1035 MFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETV----NQMLARSEEEFQTYQRID 1090
++ ER + Q +++E + EN ET N A +EE +
Sbjct: 1082 AIKKRREARERRRLRQNGT-KENEIETLENTPEASETSLIENNSFTAAVDEETNADKETT 1140
Query: 1091 AERRKEQG-KKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEK----ALHMGRGSRQRKQ 1145
A R K + +K R I + D ++E Q AK EE+ ++ + GS +K+
Sbjct: 1141 ASRSKRRSSRKKRTISIVTAEDKENTQEESTSQENGGAKVEEEVKSSSVEIINGSESKKK 1200
Score = 43 (20.2 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 1023 KLNMDEKVIQAGMFDQKSTGSERHQF--LQTILHQDDEEDEEENAVPDDETVNQMLA--R 1078
K+N I+ +Q S QF L LH E+DE++ + T Q LA +
Sbjct: 326 KINSIIDFIKERQSEQWSRQERCFQFGRLGASLHNQMEKDEQKRI---ERTAKQRLAALK 382
Query: 1079 SEEEFQTYQRI 1089
S +E + Y ++
Sbjct: 383 SNDE-EAYLKL 392
Score = 40 (19.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 22/72 (30%), Positives = 36/72 (50%)
Query: 1225 IMRVVIKYTDSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDEL 1284
+ RV K+ D RVL P K + L ++++ + MDI + R++D KY +D
Sbjct: 786 LFRVAGKFELLD-RVL--PKFKASGHRVLM-FFQMT-QVMDIMEDFLRMKDLKYMRLDGS 840
Query: 1285 QK-DFKTLCRNA 1295
K + +T NA
Sbjct: 841 TKTEERTEMLNA 852
Score = 37 (18.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 637 YKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDK 670
YK +R+ LQ + ++F ++ YV DK
Sbjct: 1312 YKTLEEVRQALQTMFENARFYNEEGSWVYVDADK 1345
>DICTYBASE|DDB_G0271052 [details] [associations]
symbol:snf2b "SNF2-related protein Snf2a"
species:44689 "Dictyostelium discoideum" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00951 dictyBase:DDB_G0271052 GO:GO:0005524 GO:GO:0005654
EMBL:AAFI02000005 GO:GO:0003677 GO:GO:0006357 GO:GO:0004386
InterPro:IPR011050 SUPFAM:SSF51126 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF47370
KO:K11647 InterPro:IPR014012 PROSITE:PS51204 RefSeq:XP_646649.1
ProteinModelPortal:Q55C32 EnsemblProtists:DDB0220695 GeneID:8617621
KEGG:ddi:DDB_G0271052 InParanoid:Q55C32 OMA:NINDNPN Uniprot:Q55C32
Length = 3247
Score = 1835 (651.0 bits), Expect = 1.9e-219, Sum P(4) = 1.9e-219
Identities = 366/639 (57%), Positives = 465/639 (72%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
+YYS AH++ E + EQ ++L GKLK YQ++GL+WMVSL+NN LNGILADEMGLGKTIQT
Sbjct: 1687 SYYSKAHSIQEDIIEQPALLEGGKLKPYQMQGLQWMVSLYNNKLNGILADEMGLGKTIQT 1746
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
IAL++YL+E KK NGPFL++VPLSTLSNW EF +WAP V V Y G RK+ +
Sbjct: 1747 IALVSYLIEVKKNNGPFLVVVPLSTLSNWGQEFSKWAPKVKRVLYYGDKPARKSKFEEFI 1806
Query: 653 A-SKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLL 711
A +FN ++TTYEY+IKDK L+K+ W Y+I+DEGHRMKN+ KL+ IL T Y + +RLL
Sbjct: 1807 APGQFNAVVTTYEYIIKDKNALSKIKWNYLIVDEGHRMKNYTSKLSIILGTSYSSRYRLL 1866
Query: 712 LTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRL 771
LTGTPLQN LPELWALLNFLLP+IF V FEQWFNAPFA TGEK+E+NEEE +LII+RL
Sbjct: 1867 LTGTPLQNSLPELWALLNFLLPTIFDCVEDFEQWFNAPFAQTGEKIEMNEEEQLLIIQRL 1926
Query: 772 HKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXX 831
HKVLRPFLLRRLKKEVE+QLPDKVE ++KCDMS Q +Y + TKG+ S
Sbjct: 1927 HKVLRPFLLRRLKKEVEAQLPDKVEKVLKCDMSAFQAKMYDLIKTKGVSKLASSGGADGN 1986
Query: 832 XXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRIL 891
L NT VQLRK+CNHP++F + E D+ L R +GKF+LLDR+L
Sbjct: 1987 PKLAKGLKNTYVQLRKICNHPYLFYDDEYNIDDN-----------LIRYAGKFDLLDRLL 2035
Query: 892 PKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEY 951
PKLK+ GHRVL+F QMTQL+NILE +F+Y+ +K++RLDG+TK+++RG LL+ FNAP+SEY
Sbjct: 2036 PKLKAAGHRVLIFSQMTQLINILEVFFAYKDYKFLRLDGSTKSDERGHLLELFNAPNSEY 2095
Query: 952 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNS 1011
FIFVLSTRAGGLGLNLQTADTVIIFDSDWNP DLQAQDRAHRIGQK VRVLRL+T +S
Sbjct: 2096 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPQMDLQAQDRAHRIGQKQTVRVLRLVTAHS 2155
Query: 1012 VEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDET 1071
VEE ILA A +K +D+K+IQAG F+ KS S+R + L+ ++ QD+ + E+ VP D
Sbjct: 2156 VEESILARANFKKELDKKIIQAGQFNNKSNRSDRKKMLEDLMTQDETAEMEKQTVPTDSQ 2215
Query: 1072 VNQMLARSEEEFQTYQRIDAERRK-------EQGKKS---RLIEVSELPDWLIKEDEEIE 1121
+N+M+ARS EEF+ Y+ +D ER + E GKK RL + E+P W+ KE E +
Sbjct: 2216 INEMIARSPEEFELYENMDKERMEIDQKKWDEAGKKGEAKRLSQEDEIPSWITKEVELGD 2275
Query: 1122 QWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKA 1160
+F + K GS +K +D + L ++ L++
Sbjct: 2276 DLSFVLNQSIKP-----GS-SKKSLDLENELQIRKILES 2308
Score = 175 (66.7 bits), Expect = 1.9e-219, Sum P(4) = 1.9e-219
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 1234 DSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDELQKDFKTLCR 1293
D +GR S+ F+KLPS+++ PDYY I P+D+K I RI K+S+ ++
Sbjct: 2561 DEEGRKRSDIFVKLPSKRDYPDYYITIKEPIDMKTIKERIVGAKFSNPLSFAASVNSMFY 2620
Query: 1294 NAQIYNEELSLIHEDSVVLESVFTK 1318
NAQIYN+ S + ED+V L+++FT+
Sbjct: 2621 NAQIYNQSGSEVFEDAVYLQNLFTE 2645
Score = 156 (60.0 bits), Expect = 1.9e-219, Sum P(4) = 1.9e-219
Identities = 36/132 (27%), Positives = 66/132 (50%)
Query: 277 KRTKRQGLKEARATEKLEK----QQKVEAERKKRQKHQ--EYITTVLQHCKDFKEYHRNN 330
K+ +R+ L + KL+K +QK++ ++ +K++ +++ +L H K+FKEYH N
Sbjct: 1263 KQLRREVLDAEISKSKLKKSKDLKQKLDQQQSNEEKNRFKDFLGQILNHSKEFKEYHANK 1322
Query: 331 QARIMRLNKAVMNYHANAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFL 390
+I ++ K V Y L DE Y KL++Q K++RL L
Sbjct: 1323 MTKIKKMTKRVTAYFILQEKKEQQQREREERERLRALKTNDESKYLKLLEQTKNQRLREL 1382
Query: 391 LSQTDEYISNLT 402
QT+E++ ++
Sbjct: 1383 FDQTNEFLDKIS 1394
Score = 84 (34.6 bits), Expect = 7.3e-212, Sum P(4) = 7.3e-212
Identities = 34/140 (24%), Positives = 69/140 (49%)
Query: 189 TNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHL--RVKAEIELRALKV 246
T IPKP +D +L+ + N V+ I ++E L S+ TL + +++ I+ + L +
Sbjct: 1202 TLIPKP--MDIEFMLECKRNLVSQLISDKLEYLYESIP-TLEDGTIEKLQETIQYKQLSL 1258
Query: 247 LNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKR 306
L +Q+QLR EV+ + L+ + ++K ++ +Q E + K Q + ++ +
Sbjct: 1259 LEYQKQLRREVLDAEISKSKLKKSKDLK--QKLDQQQSNEEKNRFKDFLGQILNHSKEFK 1316
Query: 307 QKHQEYITTVLQHCKDFKEY 326
+ H +T + + K Y
Sbjct: 1317 EYHANKMTKIKKMTKRVTAY 1336
Score = 60 (26.2 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 24/118 (20%), Positives = 51/118 (43%)
Query: 1014 ERILAAARYKLNMDEKVIQAGMFDQKSTGSER---HQFLQTILHQDDEEDEEENAVPDDE 1070
++I A LN +++IQ M QK +R HQ Q +L Q + + P +
Sbjct: 875 QQIQAPPGQTLNQ-QQLIQQQMLHQKLLQQQRLIQHQQSQ-LLQQPQAQQTYQQTQPQTQ 932
Query: 1071 TVNQMLARSEEEFQ------TYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQ 1122
Q ++++ +Q TYQ+ ++ +Q + + P ++ +++ +Q
Sbjct: 933 QTQQTQPQTQQTYQQPQAQQTYQQTQQAQQTQQTQPQTQQQTQPQPQSQVQPEQQQQQ 990
Score = 57 (25.1 bits), Expect = 1.9e-219, Sum P(4) = 1.9e-219
Identities = 20/71 (28%), Positives = 31/71 (43%)
Query: 49 NPQENLTALQRAIDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQQLRFQIMAYR 108
N +N Q MK Q + P QKL+ A FT Q+ +R Q+ AY+
Sbjct: 574 NQNQNQNQNQNQ-QQMKAQ--QPQPIQQKLLAPPA------FFFTQEQLDVIRAQVYAYK 624
Query: 109 LLARNQPLTPQ 119
+ +P+T +
Sbjct: 625 CFMQRKPITEE 635
Score = 56 (24.8 bits), Expect = 7.9e-07, Sum P(3) = 7.9e-07
Identities = 14/66 (21%), Positives = 30/66 (45%)
Query: 1023 KLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEE 1082
+L++ E ++ DQ ST S Q TI Q ++ ++ P + Q + +++
Sbjct: 2683 QLDISEHQDKSNSADQSSTTSTIEQSQPTITQQSPQQQPQQQPQPQQQQQQQQQQQQQQQ 2742
Query: 1083 FQTYQR 1088
+ Q+
Sbjct: 2743 QKPQQQ 2748
Score = 53 (23.7 bits), Expect = 2.9e-205, Sum P(3) = 2.9e-205
Identities = 10/56 (17%), Positives = 33/56 (58%)
Query: 276 YKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQ 331
Y++ ++Q + +A + ++QQ+++ +++++Q+ Q+ Q + ++ H+ Q
Sbjct: 92 YQQAQQQHQAQQQAQQHAQQQQQLQQQQQQQQQQQQQQQQQQQQ-QQHQQQHQQQQ 146
Score = 51 (23.0 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 14/110 (12%), Positives = 50/110 (45%)
Query: 997 QKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQD 1056
Q+ + + L+ ++++L + + + ++ +Q Q+ ++ Q Q Q
Sbjct: 180 QQQQQQYHLLLQQQQQQQQLLQQQQQQQQLQQQQLQQQQLQQQQAQLQQQQAQQQQAQQ- 238
Query: 1057 DEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEV 1106
++ +++ A + Q + +++ Q + +++++ K++ +EV
Sbjct: 239 -QQQQQQQAQQAQQQQQQQQQQQQQQHQQTNMMQQQQQQQVPTKNQHVEV 287
Score = 48 (22.0 bits), Expect = 9.8e-205, Sum P(3) = 9.8e-205
Identities = 13/63 (20%), Positives = 36/63 (57%)
Query: 269 TAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHR 328
T+ N+ + ++ +Q L + ++ ++QQ+ + +++++Q+ Q+ QH + + H+
Sbjct: 477 TSPNIPSTQQLMQQQLLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ--QHQQQHQ--HQ 532
Query: 329 NNQ 331
NQ
Sbjct: 533 QNQ 535
Score = 48 (22.0 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 11/62 (17%), Positives = 27/62 (43%)
Query: 1047 QFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEV 1106
Q +Q HQ ++ E E + Q + +E Q + + + +++ ++ ++
Sbjct: 999 QQIQQPQHQQSQQQSENLQQQQPEHLQQQQQQQQEHLQQPENLQPQPQQQSQQQPEQVQS 1058
Query: 1107 SE 1108
SE
Sbjct: 1059 SE 1060
Score = 48 (22.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 13/92 (14%), Positives = 41/92 (44%)
Query: 1010 NSVEERILAAARYKLNMDEKV----IQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENA 1065
N+ EE+ + L++++++ +Q+ + Q + Q Q Q + +++
Sbjct: 62 NATEEKPKPSYNMPLSIEQQIQNQMMQSQQYQQAQQQHQAQQQAQQHAQQQQQLQQQQQQ 121
Query: 1066 VPDDETVNQMLARSEEEFQTYQRIDAERRKEQ 1097
+ Q + ++ Q +Q+ +++++Q
Sbjct: 122 QQQQQQQQQQQQQQQQHQQQHQQQQLQQQQQQ 153
Score = 47 (21.6 bits), Expect = 1.2e-204, Sum P(3) = 1.2e-204
Identities = 12/70 (17%), Positives = 35/70 (50%)
Query: 250 QRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKH 309
Q+QL+ + ++ + A + ++ +Q ++ + ++ ++QQ + ++Q+
Sbjct: 216 QQQLQQQQAQLQQQQAQQQQAQQQQQQQQQAQQAQQQQQQQQQQQQQQHQQTNMMQQQQQ 275
Query: 310 QEYITTVLQH 319
Q+ + T QH
Sbjct: 276 QQ-VPTKNQH 284
Score = 46 (21.3 bits), Expect = 4.5e-206, Sum P(4) = 4.5e-206
Identities = 11/64 (17%), Positives = 35/64 (54%)
Query: 277 KRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRN-NQARIM 335
++ ++Q ++ + ++ ++QQ+ ++ + Q++Q++ QH + ++N NQ +
Sbjct: 502 QQQQQQQQQQQQQQQQQQQQQQQHQQQHQHQQNQQFQQPQHQHFNQNQNQNQNQNQNQNQ 561
Query: 336 RLNK 339
N+
Sbjct: 562 NQNQ 565
Score = 46 (21.3 bits), Expect = 1.6e-204, Sum P(3) = 1.6e-204
Identities = 8/38 (21%), Positives = 23/38 (60%)
Query: 294 EKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQ 331
+ QQ+ + +++++Q Q+ LQ + + ++H+ +Q
Sbjct: 385 QTQQQQQQQQQQQQSPQQQPQQFLQPQQQYHQHHQQHQ 422
Score = 46 (21.3 bits), Expect = 1.8e-18, Sum P(4) = 1.8e-18
Identities = 8/46 (17%), Positives = 24/46 (52%)
Query: 1055 QDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKK 1100
+DD++D +E D++ + ++ + ++ A +K++ +K
Sbjct: 2433 EDDDDDADEEDEEDEDFQRPVRSKKRAKVAASKKPSASSKKQEKEK 2478
Score = 44 (20.5 bits), Expect = 2.6e-204, Sum P(3) = 2.6e-204
Identities = 12/56 (21%), Positives = 30/56 (53%)
Query: 277 KRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQE-YITTVLQHCKDFKEYHRNNQ 331
++ ++Q ++ + T +++QQ+ + K + H E Y+ +V + ++ Y N Q
Sbjct: 254 QQQQQQQQQQHQQTNMMQQQQQQQVPTKNQ--HVEVYVVSVFHYFYYYQRYLDNLQ 307
Score = 44 (20.5 bits), Expect = 4.6e-11, Sum P(4) = 4.6e-11
Identities = 29/144 (20%), Positives = 58/144 (40%)
Query: 984 QDLQAQDRAHRIGQKNEVRVLRLM--TVNSVEERILAAARYKLNMDEKVIQAGMFD--QK 1039
++ + ++R + +E + L+L+ T N + L+ ++Q +K
Sbjct: 1348 REREERERLRALKTNDESKYLKLLEQTKNQRLRELFDQTNEFLDKISHLLQKEKISIQEK 1407
Query: 1040 STGSE--RHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQ 1097
E R Q Q +L Q ++E EE+ E ++ M ++ + T R
Sbjct: 1408 EENEEAIRRQQDQLLLQQKEKEGEED--AKQSEKISIMNITNDVDIDTDGNT-TNRDLSN 1464
Query: 1098 GKKSRLIEVSELPDWLI--KEDEE 1119
KS L+ S L+ K+D++
Sbjct: 1465 NSKSPLVRSSNPISNLLNGKDDDD 1488
Score = 44 (20.5 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 14/87 (16%), Positives = 37/87 (42%)
Query: 1011 SVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDE 1070
S+E++I + ++ ++ QA Q +++H Q L Q ++ +++ +
Sbjct: 77 SIEQQI----QNQMMQSQQYQQAQQQHQAQQQAQQHAQQQQQLQQQQQQQQQQQQQQQQQ 132
Query: 1071 TVNQMLARSEEEFQTYQRIDAERRKEQ 1097
Q + ++ Q Q+ ++Q
Sbjct: 133 QQQQQHQQQHQQQQLQQQQQQHHHQQQ 159
Score = 43 (20.2 bits), Expect = 4.5e-07, Sum P(3) = 4.5e-07
Identities = 15/77 (19%), Positives = 35/77 (45%)
Query: 1032 QAGMFDQKSTGSERHQFLQTILHQDDEEDEEENA----VPDDETV--NQMLARSEEEFQT 1085
QA Q +HQ Q + HQ + N +P + + Q+L + +++ Q
Sbjct: 443 QAAYEAQLKQQQMKHQQQQHLQHQQNMNVTSPNMTSPNIPSTQQLMQQQLLLQQQQQQQQ 502
Query: 1086 YQRIDAERRKEQGKKSR 1102
Q+ +++++Q ++ +
Sbjct: 503 QQQQQQQQQQQQQQQQQ 519
Score = 42 (19.8 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 10/75 (13%), Positives = 35/75 (46%)
Query: 1071 TVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEE 1130
++ Q + + Q YQ+ + + +Q + + +L ++ ++ +Q + +++
Sbjct: 77 SIEQQIQNQMMQSQQYQQAQQQHQAQQQAQQHAQQQQQLQQ---QQQQQQQQQQQQQQQQ 133
Query: 1131 EKALHMGRGSRQRKQ 1145
++ H + +Q+ Q
Sbjct: 134 QQQQHQQQHQQQQLQ 148
Score = 41 (19.5 bits), Expect = 2.5e-207, Sum P(4) = 2.5e-207
Identities = 11/49 (22%), Positives = 26/49 (53%)
Query: 284 LKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQA 332
++ + T+ ++ QQ + E+ + Q+ E IT Q +D ++ ++ A
Sbjct: 1056 VQSSEQTQSMQAQQ--QPEQNQPQQQSEQITQQQQSQQDPQQINQQPNA 1102
Score = 41 (19.5 bits), Expect = 5.4e-204, Sum P(3) = 5.4e-204
Identities = 10/59 (16%), Positives = 34/59 (57%)
Query: 277 KRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDF----KEYHRNNQ 331
++ ++Q ++ + ++ ++QQ ++++Q+ Q+ + Q + F ++YH+++Q
Sbjct: 361 QQQQQQQQQQQQQQQQPQQQQHQPQTQQQQQQQQQQQQSPQQQPQQFLQPQQQYHQHHQ 419
Score = 41 (19.5 bits), Expect = 7.1e-07, Sum P(3) = 7.1e-07
Identities = 14/101 (13%), Positives = 42/101 (41%)
Query: 987 QAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAA--RYKLNMDEKVIQAGMFDQKSTGSE 1044
Q Q + H + Q+ + + +L+ ++++ + +L + +Q Q+ +
Sbjct: 181 QQQQQYHLLLQQQQQQQ-QLLQQQQQQQQLQQQQLQQQQLQQQQAQLQQQQAQQQQAQQQ 239
Query: 1045 RHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQT 1085
+ Q Q Q ++ +++ + N M + +++ T
Sbjct: 240 QQQQQQAQQAQQQQQQQQQQQQQQHQQTNMMQQQQQQQVPT 280
Score = 40 (19.1 bits), Expect = 1.2e-217, Sum P(4) = 1.2e-217
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 65 KEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQQ-LRFQ----IMAYRLLARNQPLTPQ 119
++Q ++ P+ Q+ + A ++K Q QQ L+ Q + + + + N P T Q
Sbjct: 427 QQQPQQQQPQIQQQQQQAAYEAQLKQQQMKHQQQQHLQHQQNMNVTSPNMTSPNIPSTQQ 486
Query: 120 L 120
L
Sbjct: 487 L 487
Score = 40 (19.1 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 12/65 (18%), Positives = 28/65 (43%)
Query: 1038 QKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQ 1097
Q+ ++ LQ + H+ + + N + N ++ + +YQ+ ++R +
Sbjct: 3160 QQQQQQQQQPQLQQLHHKSNHNNYNNNNYNSNHNNN-----NQYQHHSYQQQQHQQRHQP 3214
Query: 1098 GKKSR 1102
KK R
Sbjct: 3215 NKKQR 3219
Score = 39 (18.8 bits), Expect = 9.1e-18, Sum P(4) = 9.1e-18
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 1056 DDEEDEEENAVPDDETVN 1073
DD+++++ N + DD N
Sbjct: 1488 DDDDNDDNNQMLDDNNNN 1505
Score = 38 (18.4 bits), Expect = 5.1e-207, Sum P(4) = 5.1e-207
Identities = 9/32 (28%), Positives = 21/32 (65%)
Query: 282 QGLKEARATEKLEKQQKVEAERKKRQKHQEYI 313
Q + + +E L++QQ E ++++Q+ QE++
Sbjct: 1005 QHQQSQQQSENLQQQQP-EHLQQQQQQQQEHL 1035
Score = 38 (18.4 bits), Expect = 1.1e-203, Sum P(3) = 1.1e-203
Identities = 8/30 (26%), Positives = 19/30 (63%)
Query: 282 QGLKEARATEKLEKQQKVEAERKKRQKHQE 311
Q ++ A E KQQ+++ ++++ +HQ+
Sbjct: 438 QQQQQQAAYEAQLKQQQMKHQQQQHLQHQQ 467
Score = 37 (18.1 bits), Expect = 1.4e-203, Sum P(3) = 1.4e-203
Identities = 6/33 (18%), Positives = 21/33 (63%)
Query: 280 KRQGLKEARATEKLEKQQKVEAERKKRQKHQEY 312
++Q ++ + + + + QQ ++ +++ Q HQ++
Sbjct: 389 QQQQQQQQQQSPQQQPQQFLQPQQQYHQHHQQH 421
Score = 37 (18.1 bits), Expect = 1.4e-203, Sum P(3) = 1.4e-203
Identities = 7/34 (20%), Positives = 19/34 (55%)
Query: 277 KRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQ 310
++ ++Q + + + L+ QQ+ ++ Q+HQ
Sbjct: 392 QQQQQQQSPQQQPQQFLQPQQQYHQHHQQHQQHQ 425
Score = 37 (18.1 bits), Expect = 1.4e-203, Sum P(3) = 1.4e-203
Identities = 6/34 (17%), Positives = 23/34 (67%)
Query: 277 KRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQ 310
++ ++Q L++ + ++ +QQ+ + ++++ Q+ Q
Sbjct: 202 QQQQQQQLQQQQLQQQQLQQQQAQLQQQQAQQQQ 235
Score = 37 (18.1 bits), Expect = 1.4e-203, Sum P(3) = 1.4e-203
Identities = 7/55 (12%), Positives = 29/55 (52%)
Query: 291 EKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYH 345
++ ++QQ+ + +++++ + Q++ Q + ++ ++ Q + + + YH
Sbjct: 361 QQQQQQQQQQQQQQQQPQQQQHQPQTQQQQQQQQQQQQSPQQQPQQFLQPQQQYH 415
Score = 37 (18.1 bits), Expect = 3.0e-06, Sum P(5) = 3.0e-06
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 778 FLLRRLKKEVESQL-PDKVEYI 798
F+L K+ + SQL DK+EY+
Sbjct: 1212 FMLE-CKRNLVSQLISDKLEYL 1232
>DICTYBASE|DDB_G0285205 [details] [associations]
symbol:snf2a "SNF2-related protein SNF2a"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 dictyBase:DDB_G0285205 GO:GO:0005524 GO:GO:0003677
EMBL:AAFI02000075 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K11647 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 RefSeq:XP_638342.2
ProteinModelPortal:Q54NM0 STRING:Q54NM0 PRIDE:Q54NM0
EnsemblProtists:DDB0233441 GeneID:8624967 KEGG:ddi:DDB_G0285205
OMA:HASKHRV Uniprot:Q54NM0
Length = 1604
Score = 1492 (530.3 bits), Expect = 1.6e-176, Sum P(4) = 1.6e-176
Identities = 299/596 (50%), Positives = 410/596 (68%)
Query: 531 EATYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTI 590
++T +A + +V EQ ++ GKLKEYQ+ GLEW++SL+ NLNGILADEMGLGKT+
Sbjct: 598 QSTTTILAKKSNNLVIEQPDLMTGGKLKEYQVTGLEWLISLYTRNLNGILADEMGLGKTV 657
Query: 591 QTIALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQ 650
QTIA I++L E+ V PFL++ PLST+SNW EF RW+P ++V+ YKG R+
Sbjct: 658 QTIAFISFLYERMNVREPFLVVAPLSTISNWVSEFARWSPKLHVIVYKGKQDERRETART 717
Query: 651 MKASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRL 710
+ + F V++T++EY+IKD+ L ++HW Y+IIDEGHR+KN + KL+ L ++ + +RL
Sbjct: 718 IPRNAFCVVITSFEYIIKDRKTLGRVHWIYIIIDEGHRIKNKNSKLSVQLRQYH-SRNRL 776
Query: 711 LLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEK-VELNEEETILIIR 769
LLTGTPLQN L ELWALLNFLLP+IF S TF+ WFNAPF G+ + +NEEE+++II
Sbjct: 777 LLTGTPLQNDLGELWALLNFLLPTIFNSADTFQNWFNAPFQAKGKNLINVNEEESLIIIN 836
Query: 770 RLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXX 829
RLH+VLR FLLRRLK +VESQLPDK E +IKC+MS LQ +YR + G+L D
Sbjct: 837 RLHQVLRFFLLRRLKSDVESQLPDKKEKVIKCNMSALQIAMYRSLVEYGVLPIDPDSKEG 896
Query: 830 XXXXXXXXLMNTIV-QLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLD 888
N IV QL+K+CNHP++F++ E ++ DL R SGKF+ +D
Sbjct: 897 RSGRLKMKGFNNIVKQLQKICNHPYLFKD-EWDINE-----------DLIRTSGKFDTMD 944
Query: 889 RILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPD 948
+IL K+ ++ HRVL+F QMT+++N++E+YFS + + ++RLDG+TK E+R L+ ++N PD
Sbjct: 945 QILTKMHASKHRVLIFTQMTEVINLMEEYFSLKEWTFLRLDGSTKPEERAHLVVEWNRPD 1004
Query: 949 SEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMT 1008
S ++IFVLST AGGLG+NLQTADTVIIFDSDWNP DLQAQDR HRIGQ N V V RL++
Sbjct: 1005 SPFWIFVLSTHAGGLGMNLQTADTVIIFDSDWNPQMDLQAQDRCHRIGQTNSVSVFRLIS 1064
Query: 1009 VNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPD 1068
NS+EE+IL A KL +D K+IQAGMF+ S ER L+ LH +E VP
Sbjct: 1065 ANSIEEKILGRATDKLEIDAKIIQAGMFNTHSNDQERRAKLEQFLHGFPNNTLDE--VPV 1122
Query: 1069 D-ETVNQMLARSEEEFQTYQRIDAERRK---------EQGKKSRLIEVSELPDWLI 1114
D + +N+++AR + EF+ +Q +D ER K Q K RL+ ELP+W++
Sbjct: 1123 DLKEINKLIARDDFEFKQFQEMDKERLKVDQANSKKTRQPIKPRLMIEKELPEWVL 1178
Score = 189 (71.6 bits), Expect = 1.6e-176, Sum P(4) = 1.6e-176
Identities = 63/224 (28%), Positives = 104/224 (46%)
Query: 195 EGLDPLI-ILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQL 253
+GL I + ERE ++ + RI+EL T LP +R+++EIE + LK+L QR+L
Sbjct: 312 KGLPEAIHSINEREMKIQAKVITRIDELKEIPTHYLPTDVRIRSEIESKQLKLLELQRKL 371
Query: 254 RAEVIACARRDTTLETAV--NVKAYK------------RTKRQGLKEARATEKLEKQQKV 299
R +V + D L ++ N K Y R + + + + Q
Sbjct: 372 RNDV-SLEMEDQVLIRSIQNNSKGYDDNDYNLYVRSIPRLINRPIDQTSSIYDTTTTQLP 430
Query: 300 EAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLN--KAVMNYHANAXXXXXXXXX 357
E+ +K +++ + H +DFK +H NN+ + +R N KA+ YH
Sbjct: 431 ESILVTNKK--KFLEAIAIHARDFKVFHSNNE-KFLRQNVIKAIHRYHKEKEKREIERLS 487
Query: 358 XXXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNL 401
L A D EGYR L+ + K++RL LL +TD +S++
Sbjct: 488 KERIRL---LKARDTEGYRDLLAKTKNERLEMLLGETDSLLSSI 528
Score = 47 (21.6 bits), Expect = 1.4e-161, Sum P(4) = 1.4e-161
Identities = 15/70 (21%), Positives = 32/70 (45%)
Query: 279 TKRQGLKEARATEKLEKQQKVEAERKKRQ-KHQEYITTVLQHCKDFKEYHRNNQARIMRL 337
T ++ +++ +QQK +++++Q + QE I +LQ K ++ N
Sbjct: 152 TNTMAYQQLSCNQRMIQQQKERIQQEQQQAQQQEQIRILLQE-KQLRQTETLNNTNNNNN 210
Query: 338 NKAVMNYHAN 347
N + N + N
Sbjct: 211 NNSNNNNNNN 220
Score = 46 (21.3 bits), Expect = 1.6e-176, Sum P(4) = 1.6e-176
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 97 VQQLRFQIMAYRLLARNQPLTPQLAMGVQGKRMEGVPSGPQMP 139
V+ + Q+ +Y+ ++RN P+ P +GV K + + P +P
Sbjct: 86 VELFKAQVESYKYISRNLPI-P---VGVLQKMSPILENSPHVP 124
Score = 46 (21.3 bits), Expect = 4.8e-09, Sum P(4) = 4.8e-09
Identities = 10/47 (21%), Positives = 24/47 (51%)
Query: 752 TTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYI 798
T E++E+ ET ++ +H+++ + +E+E +L E +
Sbjct: 509 TKNERLEMLLGETDSLLSSIHQLMEKEQTEKRARELEEELKQNEEQL 555
Score = 45 (20.9 bits), Expect = 4.8e-09, Sum P(4) = 4.8e-09
Identities = 19/94 (20%), Positives = 44/94 (46%)
Query: 984 QDLQAQDRAHRIGQKNEVRVLRLMTVNSVE---ERILAAARYKLNMDEKVIQAGMFDQKS 1040
+D+ + R+ I N V +T N E+ + +YK +++ K ++ G +
Sbjct: 1187 EDIAGKKRSTAIASANSF-VHDNLTDNQYARMIEKNMTFEQYKAHLEAKKLKNGKSKKDG 1245
Query: 1041 TGSERHQFLQT-ILHQDDEEDEEENAVPDDETVN 1073
S++ + ++ D+ED ++ + DDE ++
Sbjct: 1246 EKSKKKKGKSRGRKNKSDDEDSSDDEL-DDEGIS 1278
Score = 42 (19.8 bits), Expect = 9.4e-09, Sum P(4) = 9.4e-09
Identities = 11/48 (22%), Positives = 22/48 (45%)
Query: 1263 PMDIKKILGRIEDGKYSSVDELQKDFKTLCRNAQIYNEELSLIHEDSV 1310
P+D GR K + + K + +C + ++ +E I+ED +
Sbjct: 888 PIDPDSKEGRSGRLKMKGFNNIVKQLQKICNHPYLFKDEWD-INEDLI 934
Score = 41 (19.5 bits), Expect = 9.0e-08, Sum P(4) = 9.0e-08
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 583 EMGLGKTIQTIALITYLMEKKK 604
EM LG+T ++ I LMEK++
Sbjct: 515 EMLLGETDSLLSSIHQLMEKEQ 536
Score = 39 (18.8 bits), Expect = 1.9e-08, Sum P(4) = 1.9e-08
Identities = 17/69 (24%), Positives = 28/69 (40%)
Query: 1037 DQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRK- 1095
D+ S+ E + I DD+ + N +D +EE Q+ ERR+
Sbjct: 1264 DEDSSDDELDD--EGISSDDDDNNINNNNNNNDNNNKNNNNNDDEETGAIQKQIVERRRA 1321
Query: 1096 --EQGKKSR 1102
+Q K+ R
Sbjct: 1322 TPQQRKQQR 1330
Score = 38 (18.4 bits), Expect = 2.3e-08, Sum P(4) = 2.3e-08
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 1025 NMDEKV--IQAGMFDQK-STGSERHQFLQTILHQDDEEDEEENAVPDD 1069
N DE+ IQ + +++ +T +R Q Q + + E+ +N DD
Sbjct: 1303 NDDEETGAIQKQIVERRRATPQQRKQQRQQQQEKQNHENNSDNENQDD 1350
Score = 37 (18.1 bits), Expect = 1.6e-176, Sum P(4) = 1.6e-176
Identities = 11/48 (22%), Positives = 23/48 (47%)
Query: 1054 HQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKS 1101
+ +D ++ N D+ET E T Q+ +R+++Q K++
Sbjct: 1291 NNNDNNNKNNNNNDDEETGAIQKQIVERRRATPQQRKQQRQQQQEKQN 1338
Score = 37 (18.1 bits), Expect = 2.2e-07, Sum P(4) = 2.2e-07
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 427 VKQKLMDTDGKVTLDQDETSQLTDMHISVREISSGKVLK-GE 467
V L D ++++ T + H+ +++ +GK K GE
Sbjct: 1205 VHDNLTDNQYARMIEKNMTFEQYKAHLEAKKLKNGKSKKDGE 1246
>TAIR|locus:2062840 [details] [associations]
symbol:SYD "SPLAYED" species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=IPI] [GO:0010199 "organ
boundary specification between lateral organs and the meristem"
evidence=IGI] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=NAS] [GO:0040029 "regulation of gene expression,
epigenetic" evidence=RCA;IMP] [GO:0009611 "response to wounding"
evidence=IEP] [GO:0005829 "cytosol" evidence=IDA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006306
"DNA methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00951 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0009611 GO:GO:0006355
GO:GO:0003677 GO:GO:0003682 GO:GO:0016887 GO:GO:0004386
GO:GO:0009908 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0010199 GO:GO:0040029 InterPro:IPR014012
PROSITE:PS51204 IPI:IPI00516285 RefSeq:NP_850116.1 UniGene:At.22414
PRIDE:F4IHS2 EnsemblPlants:AT2G28290.1 GeneID:817375
KEGG:ath:AT2G28290 OMA:SDLYAIS Uniprot:F4IHS2
Length = 3574
Score = 1486 (528.2 bits), Expect = 1.3e-167, Sum P(3) = 1.3e-167
Identities = 292/571 (51%), Positives = 400/571 (70%)
Query: 534 YYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTI 593
YY +AH++ E + EQ S LV GKL+EYQ+ GL W+VSL+NN+LNGILADEMGLGKT+Q I
Sbjct: 731 YYLMAHSIKENINEQPSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVI 790
Query: 594 ALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSP-HLRKTLQAQMK 652
+LI YLME K GPFL++VP S L W E WAPS++ + Y G+P RK + Q+
Sbjct: 791 SLICYLMETKNDRGPFLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIV 850
Query: 653 ASKFNVLLTTYEYVIK--DKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRL 710
KFNVLLTTYEY++ D+ L+K+HW Y+IIDEGHR+KN CKL L YV+ HRL
Sbjct: 851 HQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLK-HYVSSHRL 909
Query: 711 LLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEK-VE---LNEEETIL 766
LLTGTPLQN L ELWALLNFLLP+IF S F QWFN PF + GE E L+EEE +L
Sbjct: 910 LLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLL 969
Query: 767 IIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
II RLH+VLRPF+LRRLK +VE++LP+K+E +I+C+ S QK+L + + L + G+
Sbjct: 970 IINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASAYQKLLMKRVEDN--LGSIGN- 1026
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFEL 886
+ N++++LR +CNHP++ Q E+ ++ + + P + R+ GK E+
Sbjct: 1027 ------AKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFL---PPIVRLCGKLEM 1077
Query: 887 LDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNA 946
LDR+LPKLK+T HRVL F MT+L++++EDY + +G+KY+RLDG T DRG L+ FN
Sbjct: 1078 LDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNK 1137
Query: 947 PDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 1006
S +FIF+LS RAGG+G+NLQ ADTVI+FD+DWNP DLQAQ RAHRIGQK +V VLR
Sbjct: 1138 SGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRF 1197
Query: 1007 MTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAV 1066
TVNSVEE++ A+A +KL + + I AG FD ++ +R ++L+++L + +E E+ V
Sbjct: 1198 ETVNSVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRKEYLESLLRESKKE--EDAPV 1255
Query: 1067 PDDETVNQMLARSEEEFQTYQRIDAERRKEQ 1097
DD+ +N ++AR E E ++ ID +R++ +
Sbjct: 1256 LDDDALNDLIARRESEIDIFESIDKQRKENE 1286
Score = 176 (67.0 bits), Expect = 1.3e-167, Sum P(3) = 1.3e-167
Identities = 46/188 (24%), Positives = 90/188 (47%)
Query: 214 IERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLRAEVIACARRDTTLETAVNV 273
I R EL S++ + + K+ IEL+ L++LN QR+LR+E + + + ++
Sbjct: 495 IGSRFNELKESVSLSDDISAKTKSVIELKKLQLLNLQRRLRSEFVYNFFKPIATDVE-HL 553
Query: 274 KAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQAR 333
K+YK+ K G + + EK E++ K E +R+ R++ +E+ + H + ++ + + R
Sbjct: 554 KSYKKHKH-G-RRIKQLEKYEQKMKEERQRRIRERQKEFFGGLEVHKEKLEDLFKVRRER 611
Query: 334 IMRLNKAVMNYHANAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQ 393
+ N+ +H L D EGY +++ K R+ LL +
Sbjct: 612 LKGFNRYAKEFHKRKERLHREKIDKIQREKINLLKINDVEGYLRMVQDAKSDRVKQLLKE 671
Query: 394 TDEYISNL 401
T++Y+ L
Sbjct: 672 TEKYLQKL 679
Score = 53 (23.7 bits), Expect = 1.3e-167, Sum P(3) = 1.3e-167
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 1137 GRGSRQRKQVDYTDSLTEKEWLK 1159
GRG R R+ Y + LTE+E+ K
Sbjct: 1357 GRGKRAREVRSYEEKLTEEEFEK 1379
Score = 52 (23.4 bits), Expect = 1.6e-167, Sum P(3) = 1.6e-167
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 1056 DDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPD 1111
D EE +E D +++Q+ ++D E+ KE G +S + + +L D
Sbjct: 2831 DIEESKEPGTESADVSLHQLADIQPGPSILVDQMDTEKSKEPGTESADVSLHQLAD 2886
Score = 50 (22.7 bits), Expect = 2.7e-167, Sum P(3) = 2.7e-167
Identities = 13/56 (23%), Positives = 26/56 (46%)
Query: 1056 DDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPD 1111
D E+ +E D +++Q+ ++D E+ KE G +S + + +L D
Sbjct: 2865 DTEKSKEPGTESADVSLHQLADIQPGPSILVDQMDTEKSKEPGTESADVSLHQLAD 2920
Score = 43 (20.2 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 28/152 (18%), Positives = 59/152 (38%)
Query: 994 RIGQKNEVRVL-RLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTI 1052
R+ ++++++L M +N V + A + M K G D G R + + +
Sbjct: 1311 RLVTEDDLKLLYETMKLNDVP---MVAKESTVGMKRKDGSMGGLDTHQYG--RGKRAREV 1365
Query: 1053 LHQDDEEDEEE-NAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPD 1111
+++ EEE + E+ + + E ++ D + L+ S
Sbjct: 1366 RSYEEKLTEEEFEKLCQTESPDSPQGKGEGSERSLAN-DTSNIPVENSSDTLLPTSPTQA 1424
Query: 1112 WLIKEDEEIEQWAFEAKEEEKALHMGRGSRQR 1143
++ E + + KEE + + GRG +R
Sbjct: 1425 ITVQPMEPVRPQSHTLKEETQPIKRGRGRPKR 1456
Score = 42 (19.8 bits), Expect = 2.7e-06, Sum P(4) = 2.7e-06
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 906 QMTQLMNILEDYFSYRGFKYMRLDG-TTKAEDRGDLLKKFNAPDSEYFI 953
++ QL+ E Y G K T++ E+ D + NA D E I
Sbjct: 664 RVKQLLKETEKYLQKLGSKLKEAKLLTSRFENEADETRTSNATDDETLI 712
Score = 42 (19.8 bits), Expect = 2.7e-06, Sum P(4) = 2.7e-06
Identities = 15/65 (23%), Positives = 33/65 (50%)
Query: 1050 QTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSEL 1109
+T++ +DE D+ ++ + +E ++A S +E I+ + G K R +++ L
Sbjct: 709 ETLIENEDESDQAKHYLESNEKY-YLMAHSIKE-----NINEQPSSLVGGKLREYQMNGL 762
Query: 1110 PDWLI 1114
WL+
Sbjct: 763 R-WLV 766
Score = 41 (19.5 bits), Expect = 2.4e-166, Sum P(3) = 2.4e-166
Identities = 13/61 (21%), Positives = 27/61 (44%)
Query: 1044 ERHQFLQTILHQDD---EEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKK 1100
E+ + LQ+++ DD E+D EE+ V + E+ + + E+ +K
Sbjct: 2236 EKEKTLQSLIPGDDADTEQDPEESVSDQRPKVGSAYTQMEDTDEAKLLMGCSVESEEKEK 2295
Query: 1101 S 1101
+
Sbjct: 2296 T 2296
Score = 39 (18.8 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 855 FQNIEEKFSDHVGGSGIVSGPDLYRVSGK-FE 885
F+N ++ D + G +VS P + + K FE
Sbjct: 2487 FENTKDSKGDDLHGESLVSCPTMEVMEQKGFE 2518
Score = 39 (18.8 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 426 SVKQKLM-DTDGKVTLDQDETSQLTDMHISVREI-SSGKVLK 465
S+ Q++ DT G + +T+ +TD+ ++EI S +LK
Sbjct: 1846 SLSQEIRRDTSGTGGSARKQTADVTDVARVMKEIFSETSLLK 1887
>TAIR|locus:2150270 [details] [associations]
symbol:CHR23 "chromatin remodeling 23" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K11647
OMA:WAPSISA IPI:IPI00536400 RefSeq:NP_197432.2 UniGene:At.43995
ProteinModelPortal:F4K128 SMR:F4K128 PRIDE:F4K128
EnsemblPlants:AT5G19310.1 GeneID:832051 KEGG:ath:AT5G19310
PhylomeDB:F4K128 Uniprot:F4K128
Length = 1064
Score = 1473 (523.6 bits), Expect = 1.2e-163, Sum P(3) = 1.2e-163
Identities = 287/527 (54%), Positives = 371/527 (70%)
Query: 529 MEEATYYSIA-HTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLG 587
+E +++A H++ E VT+Q S+L G+L+ YQ++GL+WMVSL+NN+ NGILADEMGLG
Sbjct: 357 LEGERQFNLAIHSIQEKVTKQPSLLQGGELRSYQLEGLQWMVSLYNNDYNGILADEMGLG 416
Query: 588 KTIQTIALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTL 647
KTIQTIALI YL+E K ++GP LI+ P + L NW EF WAPS++ Y GS R +
Sbjct: 417 KTIQTIALIAYLLESKDLHGPHLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEI 476
Query: 648 QAQMKASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAP 707
+A++ KFNVL+T Y+ +++DK L K+ W YMI+DEGHR+KNH C L L T Y
Sbjct: 477 RARIAGGKFNVLITHYDLIMRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIK 536
Query: 708 HRLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILI 767
RLLLTGTP+QN L ELW+LLNFLLP IF S+ FE+WFN PFA G L +EE +LI
Sbjct: 537 RRLLLTGTPIQNSLQELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGS-ASLTDEEELLI 595
Query: 768 IRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKG-ILLTDGSE 826
I RLH V+RPFLLRR K EVE LP K + I+KCDMS QK+ Y+ + G + L G+
Sbjct: 596 INRLHHVIRPFLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYKQVTDVGRVGLHSGN- 654
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFEL 886
L N +QLRK CNHP++F +D+ + P++ R SGKFEL
Sbjct: 655 ------GKSKSLQNLTMQLRKCCNHPYLFVG-----ADY----NMCKKPEIVRASGKFEL 699
Query: 887 LDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNA 946
LDR+LPKLK GHR+LLF QMT+L+++LE Y S + Y+RLDG+TK + RG LLK+FN
Sbjct: 700 LDRLLPKLKKAGHRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNE 759
Query: 947 PDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 1006
PDS YF+F+LSTRAGGLGLNLQTADT+IIFDSDWNP D QA+DRAHRIGQK EVRV L
Sbjct: 760 PDSPYFMFLLSTRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVL 819
Query: 1007 MTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTIL 1053
+++ S+EE IL A+ K+ +D KVIQAG+F+ ST +R + L+ I+
Sbjct: 820 VSIGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLEEIM 866
Score = 815 (292.0 bits), Expect = 1.0e-90, Sum P(2) = 1.0e-90
Identities = 163/326 (50%), Positives = 226/326 (69%)
Query: 838 LMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKST 897
L N +QLRK CNHP++F +D+ + P++ R SGKFELLDR+LPKLK
Sbjct: 660 LQNLTMQLRKCCNHPYLFVG-----ADY----NMCKKPEIVRASGKFELLDRLLPKLKKA 710
Query: 898 GHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLS 957
GHR+LLF QMT+L+++LE Y S + Y+RLDG+TK + RG LLK+FN PDS YF+F+LS
Sbjct: 711 GHRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFLLS 770
Query: 958 TRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERIL 1017
TRAGGLGLNLQTADT+IIFDSDWNP D QA+DRAHRIGQK EVRV L+++ S+EE IL
Sbjct: 771 TRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVIL 830
Query: 1018 AAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLA 1077
A+ K+ +D KVIQAG+F+ ST +R + L+ I+ + E+ VP + +N++ A
Sbjct: 831 ERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLEEIMSKGTSSLGED--VPSEREINRLAA 888
Query: 1078 RSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMG 1137
R+EEEF ++++D ERRK++ K+RL+E E+P+W + + E K K H G
Sbjct: 889 RTEEEFWMFEQMDEERRKKENYKTRLMEEKEVPEWAYTSETQ------EDKTNAKN-HFG 941
Query: 1138 R--GSRQRKQVDYTDSLTEKEWLKAI 1161
G R+RK+ Y+DSL++ +W+KA+
Sbjct: 942 SLTGKRKRKEAVYSDSLSDLQWMKAM 967
Score = 109 (43.4 bits), Expect = 1.2e-163, Sum P(3) = 1.2e-163
Identities = 50/212 (23%), Positives = 87/212 (41%)
Query: 206 RENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLRAEVIA------ 259
+E R I R+ +L G L S E L+ K +EL LK+ Q ++R EV A
Sbjct: 95 KETRYKNRIHNRLSQLEG-LPSNRGEDLQEKCLLELYGLKLQELQCRVRGEVSAEYWLRL 153
Query: 260 -CARRDTTLETAVNVKAYKRTKRQG---LKEA----RATEKLEKQQKVEAERKK--RQKH 309
CA + L ++ +R G + EA R E+ ++E E K
Sbjct: 154 NCADPERQLYDWGMMRLPRRMYGVGDSFVMEADDQFRNKRDAERLLRLEEEEKNLIETTQ 213
Query: 310 QEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXXXXXXXLMA 369
+++ VL ++F+ + + R + N V +H L +
Sbjct: 214 RKFFAEVLNAVREFQLQIQASHRRCKQRNDGVQAWHGKQRQRATRAEKLRIMA----LKS 269
Query: 370 EDEEGYRKLIDQKKDKRLAFLLSQTDEYISNL 401
+D+E Y KL + K+++L L +T++ +L
Sbjct: 270 DDQEEYMKLAKESKNEKLTLFLEETNKIFVSL 301
Score = 71 (30.1 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 37/171 (21%), Positives = 79/171 (46%)
Query: 984 QDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLN-MDEKVIQAGMFDQKS-- 1040
+D+ ++ +R+ + E ++ EER YK M+EK + + ++
Sbjct: 875 EDVPSEREINRLAARTEEEFWMFEQMD--EER-RKKENYKTRLMEEKEVPEWAYTSETQE 931
Query: 1041 --TGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQ---RIDAERRK 1095
T ++ H F + +E +++ D + + M + E+ + Q R D + R
Sbjct: 932 DKTNAKNH-FGSLTGKRKRKEAVYSDSLSDLQWMKAMESEDEDASKVSQKRKRTDTKTRM 990
Query: 1096 EQGKKSRLIEVSELPDWLIKEDEEI-EQWAFEAKEE-EKALHMGRGSRQRK 1144
G K+ + +SE + +E+EE E+ E++EE EK LH + +++++
Sbjct: 991 SNGSKAEAV-LSESDEEKEEEEEERKEESGKESEEENEKPLHSWKTNKKKR 1040
Score = 48 (22.0 bits), Expect = 1.2e-163, Sum P(3) = 1.2e-163
Identities = 15/88 (17%), Positives = 35/88 (39%)
Query: 1055 QDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLI 1114
Q + + + + + +L+ S+EE + + ER++E GK+S L W
Sbjct: 979 QKRKRTDTKTRMSNGSKAEAVLSESDEEKEEEEE---ERKEESGKESEEENEKPLHSWKT 1035
Query: 1115 KEDEEIEQWAFEAKEEEKALHMGRGSRQ 1142
+ + + + +GS++
Sbjct: 1036 NKKKRSRYPVMTSSPNSRGKGSSKGSKR 1063
Score = 48 (22.0 bits), Expect = 1.2e-163, Sum P(3) = 1.2e-163
Identities = 23/110 (20%), Positives = 47/110 (42%)
Query: 1056 DDEEDEEEN---AVPDDETVNQMLARSE-EEFQTYQRIDAERRKEQGKKSRLIEVSELPD 1111
D+E ++EN + +++ V + SE +E +T + + K+ + L D
Sbjct: 901 DEERRKKENYKTRLMEEKEVPEWAYTSETQEDKTNAKNHFGSLTGKRKRKEAVYSDSLSD 960
Query: 1112 --WLI---KEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKE 1156
W+ EDE+ + + + K + M GS+ + +D E+E
Sbjct: 961 LQWMKAMESEDEDASKVSQKRKRTDTKTRMSNGSKAEAVLSESDEEKEEE 1010
Score = 47 (21.6 bits), Expect = 1.6e-163, Sum P(3) = 1.6e-163
Identities = 10/46 (21%), Positives = 23/46 (50%)
Query: 1050 QTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRK 1095
+ +L + DEE EEE +E+ + +E+ +++ +R +
Sbjct: 997 EAVLSESDEEKEEEEEERKEESGKESEEENEKPLHSWKTNKKKRSR 1042
>CGD|CAL0005422 [details] [associations]
symbol:ISW2 species:5476 "Candida albicans" [GO:0001410
"chlamydospore formation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071280 "cellular response to copper ion"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0008623 "CHRAC" evidence=IEA] [GO:0060195 "negative regulation
of antisense RNA transcription" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0046020 "negative
regulation of transcription from RNA polymerase II promoter by
pheromones" evidence=IEA] [GO:0006348 "chromatin silencing at
telomere" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA] [GO:0015616 "DNA translocase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 1188 (423.3 bits), Expect = 4.3e-133, Sum P(4) = 4.3e-133
Identities = 237/544 (43%), Positives = 345/544 (63%)
Query: 542 HEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLME 601
H ++TE S + GKL+EYQI+GL W++SL+ N L+GILADEMGLGKT+QTI+ + YL
Sbjct: 124 HTVMTESPSYIKEGKLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYLRY 183
Query: 602 KKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTL-QAQMKASKFNVLL 660
K ++GPF++IVP STL NW EF +W P VNVV +G R ++ + Q+ +KF+VL+
Sbjct: 184 IKHIDGPFIVIVPKSTLDNWRREFAKWTPDVNVVVLQGDKEQRASIIKDQLYTAKFDVLI 243
Query: 661 TTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNK 720
T++E ++++K L K W+Y+++DE HR+KN L+ I+ FY + +RLL+TGTPLQN
Sbjct: 244 TSFEMILREKSALQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFY-SRNRLLITGTPLQNN 302
Query: 721 LPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLL 780
L ELWALLNFLLP +F F++ F+ + ++ E + + LH++L PFLL
Sbjct: 303 LHELWALLNFLLPDVFGDSDQFDEAFDNQNSEELDEEEKQRRQD-KAVSELHQLLSPFLL 361
Query: 781 RRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMN 840
RR+K +VE L K+E + M+ +Q Y+ + K I D L+N
Sbjct: 362 RRVKADVEKSLLPKIETNVYIGMTDMQVEWYKRLLEKDI---DAVNGVVGKREGKTRLLN 418
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHR 900
++QLRK CNHP++F E G + L SGK +LD++L K K+ G R
Sbjct: 419 IVMQLRKCCNHPYLFDGAEP-------GPPYTTDEHLVYNSGKMIILDKMLKKFKAEGSR 471
Query: 901 VLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRA 960
VL+F QM+++++ILEDY +R ++Y R+DG+T EDR + + ++NAPDSE FIF+L+TRA
Sbjct: 472 VLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDEYNAPDSEKFIFLLTTRA 531
Query: 961 GGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAA 1020
GGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK +V+V R +T ++EE++L A
Sbjct: 532 GGLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTEKAIEEKVLERA 591
Query: 1021 RYKLNMDEKVIQAG--MFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLAR 1078
KL +D+ VIQ G M + G+ + + I H E E D+ V ++L R
Sbjct: 592 AQKLRLDQLVIQQGRQMNSNNNVGNSKDDLIGMIQHGAKEVFENSKGTMLDDDVEEILKR 651
Query: 1079 SEEE 1082
E+
Sbjct: 652 GAEK 655
Score = 63 (27.2 bits), Expect = 4.3e-133, Sum P(4) = 4.3e-133
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 1050 QTILHQDDEED--EEENAVPDDETVNQMLARSEEEFQTYQRI 1089
+ L QDDE+D +E E +N +A +EEE T R+
Sbjct: 789 EEFLEQDDEDDMTRDEKRKIAQEKINNAVALTEEEIATRDRL 830
Score = 51 (23.0 bits), Expect = 4.3e-133, Sum P(4) = 4.3e-133
Identities = 23/99 (23%), Positives = 44/99 (44%)
Query: 1238 RVLSEPFIKLPSRKELPDYYEVIDR--PMDIKKILGRIEDGKYSSVDELQKDFKTLCRNA 1295
R+L E F SR++ ++ + + KKI + + K S ++ K F +
Sbjct: 829 RLLEESFHNW-SRRDFTNFIHATAKYGRNEYKKIAKALGNKKRSEIERYSKMFWQNYQKI 887
Query: 1296 QIYNEELSLIHEDSVVLESVFTKAR---QRVESGEDPDE 1331
+ Y + LS I E + + + +++ES +DP E
Sbjct: 888 EGYEKYLSQIEAVEKKREKLINQQKLLAKKIESLQDPLE 926
Score = 49 (22.3 bits), Expect = 4.3e-133, Sum P(4) = 4.3e-133
Identities = 27/145 (18%), Positives = 65/145 (44%)
Query: 203 LQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLRAEVIACAR 262
L+ER R L ++ + E + +T R + + L AL F++ + A
Sbjct: 22 LEERRKRFLLEVDAKHERAHDKDDATK----RFQYLLGLSAL----FRKFINLN----AS 69
Query: 263 RDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQE---YITTVLQH 319
+D + + K + ++ K+A+ + + + +++ +AE + ++HQ+ + TV+
Sbjct: 70 KDPAFKKRIREIDSKTSFKESSKKAKNSRRRKTEKEEDAELLQDEEHQDDEDHQHTVMTE 129
Query: 320 CKDFKEYHRNNQARIMRLNKAVMNY 344
+ + + + +I LN + Y
Sbjct: 130 SPSYIKEGKLREYQIQGLNWLISLY 154
>UNIPROTKB|Q5A310 [details] [associations]
symbol:ISW2 "Putative uncharacterized protein ISW2"
species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0071280 "cellular response to copper ion" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 1188 (423.3 bits), Expect = 4.3e-133, Sum P(4) = 4.3e-133
Identities = 237/544 (43%), Positives = 345/544 (63%)
Query: 542 HEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLME 601
H ++TE S + GKL+EYQI+GL W++SL+ N L+GILADEMGLGKT+QTI+ + YL
Sbjct: 124 HTVMTESPSYIKEGKLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYLRY 183
Query: 602 KKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTL-QAQMKASKFNVLL 660
K ++GPF++IVP STL NW EF +W P VNVV +G R ++ + Q+ +KF+VL+
Sbjct: 184 IKHIDGPFIVIVPKSTLDNWRREFAKWTPDVNVVVLQGDKEQRASIIKDQLYTAKFDVLI 243
Query: 661 TTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNK 720
T++E ++++K L K W+Y+++DE HR+KN L+ I+ FY + +RLL+TGTPLQN
Sbjct: 244 TSFEMILREKSALQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFY-SRNRLLITGTPLQNN 302
Query: 721 LPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLL 780
L ELWALLNFLLP +F F++ F+ + ++ E + + LH++L PFLL
Sbjct: 303 LHELWALLNFLLPDVFGDSDQFDEAFDNQNSEELDEEEKQRRQD-KAVSELHQLLSPFLL 361
Query: 781 RRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMN 840
RR+K +VE L K+E + M+ +Q Y+ + K I D L+N
Sbjct: 362 RRVKADVEKSLLPKIETNVYIGMTDMQVEWYKRLLEKDI---DAVNGVVGKREGKTRLLN 418
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHR 900
++QLRK CNHP++F E G + L SGK +LD++L K K+ G R
Sbjct: 419 IVMQLRKCCNHPYLFDGAEP-------GPPYTTDEHLVYNSGKMIILDKMLKKFKAEGSR 471
Query: 901 VLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRA 960
VL+F QM+++++ILEDY +R ++Y R+DG+T EDR + + ++NAPDSE FIF+L+TRA
Sbjct: 472 VLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDEYNAPDSEKFIFLLTTRA 531
Query: 961 GGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAA 1020
GGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK +V+V R +T ++EE++L A
Sbjct: 532 GGLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTEKAIEEKVLERA 591
Query: 1021 RYKLNMDEKVIQAG--MFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLAR 1078
KL +D+ VIQ G M + G+ + + I H E E D+ V ++L R
Sbjct: 592 AQKLRLDQLVIQQGRQMNSNNNVGNSKDDLIGMIQHGAKEVFENSKGTMLDDDVEEILKR 651
Query: 1079 SEEE 1082
E+
Sbjct: 652 GAEK 655
Score = 63 (27.2 bits), Expect = 4.3e-133, Sum P(4) = 4.3e-133
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 1050 QTILHQDDEED--EEENAVPDDETVNQMLARSEEEFQTYQRI 1089
+ L QDDE+D +E E +N +A +EEE T R+
Sbjct: 789 EEFLEQDDEDDMTRDEKRKIAQEKINNAVALTEEEIATRDRL 830
Score = 51 (23.0 bits), Expect = 4.3e-133, Sum P(4) = 4.3e-133
Identities = 23/99 (23%), Positives = 44/99 (44%)
Query: 1238 RVLSEPFIKLPSRKELPDYYEVIDR--PMDIKKILGRIEDGKYSSVDELQKDFKTLCRNA 1295
R+L E F SR++ ++ + + KKI + + K S ++ K F +
Sbjct: 829 RLLEESFHNW-SRRDFTNFIHATAKYGRNEYKKIAKALGNKKRSEIERYSKMFWQNYQKI 887
Query: 1296 QIYNEELSLIHEDSVVLESVFTKAR---QRVESGEDPDE 1331
+ Y + LS I E + + + +++ES +DP E
Sbjct: 888 EGYEKYLSQIEAVEKKREKLINQQKLLAKKIESLQDPLE 926
Score = 49 (22.3 bits), Expect = 4.3e-133, Sum P(4) = 4.3e-133
Identities = 27/145 (18%), Positives = 65/145 (44%)
Query: 203 LQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLRAEVIACAR 262
L+ER R L ++ + E + +T R + + L AL F++ + A
Sbjct: 22 LEERRKRFLLEVDAKHERAHDKDDATK----RFQYLLGLSAL----FRKFINLN----AS 69
Query: 263 RDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQE---YITTVLQH 319
+D + + K + ++ K+A+ + + + +++ +AE + ++HQ+ + TV+
Sbjct: 70 KDPAFKKRIREIDSKTSFKESSKKAKNSRRRKTEKEEDAELLQDEEHQDDEDHQHTVMTE 129
Query: 320 CKDFKEYHRNNQARIMRLNKAVMNY 344
+ + + + +I LN + Y
Sbjct: 130 SPSYIKEGKLREYQIQGLNWLISLY 154
>UNIPROTKB|P28370 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IDA]
[GO:0036310 "annealing helicase activity" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA] [GO:0090537
"CERF complex" evidence=IDA] [GO:0030182 "neuron differentiation"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0007420 "brain development" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP] [GO:0000733 "DNA strand renaturation" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0036310 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:M88163 EMBL:M89907 EMBL:AL022577 EMBL:BC117447
IPI:IPI00216046 IPI:IPI00646130 PIR:S35457 PIR:S35458
RefSeq:NP_003060.2 RefSeq:NP_620604.2 UniGene:Hs.152292
ProteinModelPortal:P28370 SMR:P28370 IntAct:P28370
MINT:MINT-2802155 STRING:P28370 PhosphoSite:P28370 DMDM:115311627
PaxDb:P28370 PRIDE:P28370 Ensembl:ENST00000371121
Ensembl:ENST00000371122 Ensembl:ENST00000371123 GeneID:6594
KEGG:hsa:6594 UCSC:uc004eun.4 UCSC:uc004eup.4 CTD:6594
GeneCards:GC0XM128580 HGNC:HGNC:11097 HPA:HPA003335 MIM:300012
neXtProt:NX_P28370 PharmGKB:PA35947 HOVERGEN:HBG056329
InParanoid:P28370 KO:K11727 OMA:PMSQKRK PhylomeDB:P28370
GenomeRNAi:6594 NextBio:25645 ArrayExpress:P28370 Bgee:P28370
CleanEx:HS_SMARCA1 Genevestigator:P28370 GermOnline:ENSG00000102038
Uniprot:P28370
Length = 1054
Score = 1197 (426.4 bits), Expect = 1.5e-126, Sum P(3) = 1.5e-126
Identities = 272/607 (44%), Positives = 370/607 (60%)
Query: 550 SILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPF 609
S + G L++YQI+GL W++SL+ N +NGILADEMGLGKT+QTIAL+ YL + + GP
Sbjct: 176 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 235
Query: 610 LIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEYVIK 668
+++VP STL NW EF+RW PS+ V+ + G R ++ +M +++V +T+YE VIK
Sbjct: 236 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIK 295
Query: 669 DKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALL 728
+K K HW+Y++IDE HR+KN KL+ I+ F + +RLLLTGTPLQN L ELWALL
Sbjct: 296 EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFK-STNRLLLTGTPLQNNLHELWALL 354
Query: 729 NFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVE 788
NFLLP +F S F+ WF+ K L +++ ++ RLH VL+PFLLRR+K +VE
Sbjct: 355 NFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAVLKPFLLRRIKTDVE 404
Query: 789 SQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKL 848
LP K E IK + GL K + R +TK IL+ D L+N ++QLRK
Sbjct: 405 KSLPPKKE--IKIYL-GLSK-MQREWYTK-ILMKDIDVLNSSGKMDKMRLLNILMQLRKC 459
Query: 849 CNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMT 908
CNHP++F E + IVS SGK +LD++L KLK G RVL+F QMT
Sbjct: 460 CNHPYLFDGAEPG-PPYTTDEHIVSN------SGKMVVLDKLLAKLKEQGSRVLIFSQMT 512
Query: 909 QLMNILEDYFSYRGFKYMRLDGTTKAEDRGD------------LLKKFNAPDSEYFIFVL 956
+L++ILEDY +RG++Y RLDG T E+R D ++ FNAP+S FIF+L
Sbjct: 513 RLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFML 572
Query: 957 STRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERI 1016
STRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK VRV RL+T N+VEERI
Sbjct: 573 STRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERI 632
Query: 1017 LAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQM 1075
+ A KL +D VIQ G + DQ+S + + LQ I H + + DE + +
Sbjct: 633 VERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFASKESELTDEDITTI 692
Query: 1076 LARSEEEFQTYQRIDAERRKEQGKKS----RL-IEVS----ELPDWLIKEDEEIEQWAFE 1126
L R E++ ER ++ G+ S R+ IE S E D+ K+ + +W
Sbjct: 693 LERGEKKTAEMN----ERLQKMGESSLRNFRMDIEQSLYKFEGEDYREKQKLGMVEWIEP 748
Query: 1127 AKEEEKA 1133
K E KA
Sbjct: 749 PKRERKA 755
Score = 41 (19.5 bits), Expect = 1.5e-126, Sum P(3) = 1.5e-126
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E + DI+KI+ +IE G+
Sbjct: 902 FWERCNELQDIEKIMAQIERGE 923
Score = 40 (19.1 bits), Expect = 1.5e-126, Sum P(3) = 1.5e-126
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 371 DEEGYRKLIDQKKDKRLAFLLSQTD 395
D E Y + + + KR FLL QT+
Sbjct: 80 DPE-YEEKMKADRAKRFEFLLKQTE 103
Score = 40 (19.1 bits), Expect = 1.5e-126, Sum P(3) = 1.5e-126
Identities = 18/72 (25%), Positives = 26/72 (36%)
Query: 256 EVIACARRDTTLETAVNVKAY-KRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYIT 314
E A A + T T K K LK A K EK+ E E K + +
Sbjct: 37 EGAAAAATEATAATEKGEKKKEKNVSSFQLKLAAKAPKSEKEMDPEYEEKMKADRAKRFE 96
Query: 315 TVLQHCKDFKEY 326
+L+ + F +
Sbjct: 97 FLLKQTELFAHF 108
>UNIPROTKB|F6TQG2 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:AL022577 HGNC:HGNC:11097 IPI:IPI00647510
ProteinModelPortal:F6TQG2 SMR:F6TQG2 PRIDE:F6TQG2
Ensembl:ENST00000450039 ArrayExpress:F6TQG2 Bgee:F6TQG2
Uniprot:F6TQG2
Length = 1005
Score = 1197 (426.4 bits), Expect = 1.5e-126, Sum P(3) = 1.5e-126
Identities = 272/607 (44%), Positives = 370/607 (60%)
Query: 550 SILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPF 609
S + G L++YQI+GL W++SL+ N +NGILADEMGLGKT+QTIAL+ YL + + GP
Sbjct: 155 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 214
Query: 610 LIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEYVIK 668
+++VP STL NW EF+RW PS+ V+ + G R ++ +M +++V +T+YE VIK
Sbjct: 215 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIK 274
Query: 669 DKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALL 728
+K K HW+Y++IDE HR+KN KL+ I+ F + +RLLLTGTPLQN L ELWALL
Sbjct: 275 EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFK-STNRLLLTGTPLQNNLHELWALL 333
Query: 729 NFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVE 788
NFLLP +F S F+ WF+ K L +++ ++ RLH VL+PFLLRR+K +VE
Sbjct: 334 NFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAVLKPFLLRRIKTDVE 383
Query: 789 SQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKL 848
LP K E IK + GL K + R +TK IL+ D L+N ++QLRK
Sbjct: 384 KSLPPKKE--IKIYL-GLSK-MQREWYTK-ILMKDIDVLNSSGKMDKMRLLNILMQLRKC 438
Query: 849 CNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMT 908
CNHP++F E + IVS SGK +LD++L KLK G RVL+F QMT
Sbjct: 439 CNHPYLFDGAEPG-PPYTTDEHIVSN------SGKMVVLDKLLAKLKEQGSRVLIFSQMT 491
Query: 909 QLMNILEDYFSYRGFKYMRLDGTTKAEDRGD------------LLKKFNAPDSEYFIFVL 956
+L++ILEDY +RG++Y RLDG T E+R D ++ FNAP+S FIF+L
Sbjct: 492 RLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFML 551
Query: 957 STRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERI 1016
STRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK VRV RL+T N+VEERI
Sbjct: 552 STRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERI 611
Query: 1017 LAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQM 1075
+ A KL +D VIQ G + DQ+S + + LQ I H + + DE + +
Sbjct: 612 VERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFASKESELTDEDITTI 671
Query: 1076 LARSEEEFQTYQRIDAERRKEQGKKS----RL-IEVS----ELPDWLIKEDEEIEQWAFE 1126
L R E++ ER ++ G+ S R+ IE S E D+ K+ + +W
Sbjct: 672 LERGEKKTAEMN----ERLQKMGESSLRNFRMDIEQSLYKFEGEDYREKQKLGMVEWIEP 727
Query: 1127 AKEEEKA 1133
K E KA
Sbjct: 728 PKRERKA 734
Score = 41 (19.5 bits), Expect = 1.5e-126, Sum P(3) = 1.5e-126
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E + DI+KI+ +IE G+
Sbjct: 881 FWERCNELQDIEKIMAQIERGE 902
Score = 40 (19.1 bits), Expect = 1.5e-126, Sum P(3) = 1.5e-126
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 371 DEEGYRKLIDQKKDKRLAFLLSQTD 395
D E Y + + + KR FLL QT+
Sbjct: 59 DPE-YEEKMKADRAKRFEFLLKQTE 82
>UNIPROTKB|K7GLQ2 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
RefSeq:XP_003135410.1 Ensembl:ENSSSCT00000033549 GeneID:100188905
Uniprot:K7GLQ2
Length = 1073
Score = 1191 (424.3 bits), Expect = 1.9e-126, Sum P(3) = 1.9e-126
Identities = 268/603 (44%), Positives = 367/603 (60%)
Query: 550 SILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPF 609
S + G L++YQI+GL W++SL+ N +NGILADEMGLGKT+QTIAL+ YL + + GP
Sbjct: 179 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 238
Query: 610 LIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEYVIK 668
+++VP STL NW EF+RW PS+ V+ + G R ++ +M +++V +T+YE VIK
Sbjct: 239 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIK 298
Query: 669 DKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALL 728
+K K HW+Y++IDE HR+KN KL+ I+ F + +RLLLTGTPLQN L ELWALL
Sbjct: 299 EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFK-STNRLLLTGTPLQNNLHELWALL 357
Query: 729 NFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVE 788
NFLLP +F S F+ WF+ K L +++ ++ RLH VL+PFLLRR+K +VE
Sbjct: 358 NFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAVLKPFLLRRIKTDVE 407
Query: 789 SQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKL 848
LP K E IK + GL K + R +TK IL+ D L+N ++QLRK
Sbjct: 408 KSLPPKKE--IKIYL-GLSK-MQREWYTK-ILMKDIDVLNSAGKMDKMRLLNILMQLRKC 462
Query: 849 CNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMT 908
CNHP++F E + IVS SGK +LD++L KLK G RVL+F QMT
Sbjct: 463 CNHPYLFDGAEPG-PPYTTDEHIVSN------SGKMVVLDKLLAKLKEQGSRVLIFSQMT 515
Query: 909 QLMNILEDYFSYRGFKYMRLDGTTKAEDRGD------LL------KKFNAPDSEYFIFVL 956
+L++ILEDY +RG++Y RLDG T E+R D LL + FN P+S FIF+L
Sbjct: 516 RLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAFNVPNSSRFIFML 575
Query: 957 STRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERI 1016
STRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK VRV RL+T N+VEERI
Sbjct: 576 STRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERI 635
Query: 1017 LAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQM 1075
+ A KL +D VIQ G + DQ+S + + LQ I H + + DE + +
Sbjct: 636 VERAEIKLRLDSIVIQQGRLIDQQSNKMAKEEMLQMIRHGATHVFASKESELTDEDITTL 695
Query: 1076 LARSE----EEFQTYQRI-DAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEE 1130
L R E E + Q++ ++ R + + + E D+ K+ + +W K E
Sbjct: 696 LERGERKTAEMNERLQKMGESSLRNFRMDTEQSLYKFEGEDYREKQKLGMVEWIEPPKRE 755
Query: 1131 EKA 1133
KA
Sbjct: 756 RKA 758
Score = 45 (20.9 bits), Expect = 1.9e-126, Sum P(3) = 1.9e-126
Identities = 18/77 (23%), Positives = 30/77 (38%)
Query: 254 RAEVIACARRDTTLETAVNVKAYKRTKRQG----LKEARATEKLEKQQKVEAERKKRQKH 309
+ E A A +T T K K+ ++ LK A K EK+ E E K +
Sbjct: 35 KEEGAAAAATASTEATVATEKGEKKKEKNASPFQLKLAAKASKSEKEMDPEYEEKMKADR 94
Query: 310 QEYITTVLQHCKDFKEY 326
+ +L+ + F +
Sbjct: 95 AKRFEFLLKQTELFAHF 111
Score = 41 (19.5 bits), Expect = 1.9e-126, Sum P(3) = 1.9e-126
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E + DI+KI+ +IE G+
Sbjct: 905 FWERCNELQDIEKIMAQIERGE 926
Score = 40 (19.1 bits), Expect = 6.5e-126, Sum P(3) = 6.5e-126
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 371 DEEGYRKLIDQKKDKRLAFLLSQTD 395
D E Y + + + KR FLL QT+
Sbjct: 83 DPE-YEEKMKADRAKRFEFLLKQTE 106
>UNIPROTKB|K7GMM0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360491.1 Ensembl:ENSSSCT00000034062
Uniprot:K7GMM0
Length = 1057
Score = 1191 (424.3 bits), Expect = 1.9e-126, Sum P(3) = 1.9e-126
Identities = 268/603 (44%), Positives = 367/603 (60%)
Query: 550 SILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPF 609
S + G L++YQI+GL W++SL+ N +NGILADEMGLGKT+QTIAL+ YL + + GP
Sbjct: 179 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 238
Query: 610 LIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEYVIK 668
+++VP STL NW EF+RW PS+ V+ + G R ++ +M +++V +T+YE VIK
Sbjct: 239 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIK 298
Query: 669 DKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALL 728
+K K HW+Y++IDE HR+KN KL+ I+ F + +RLLLTGTPLQN L ELWALL
Sbjct: 299 EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFK-STNRLLLTGTPLQNNLHELWALL 357
Query: 729 NFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVE 788
NFLLP +F S F+ WF+ K L +++ ++ RLH VL+PFLLRR+K +VE
Sbjct: 358 NFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAVLKPFLLRRIKTDVE 407
Query: 789 SQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKL 848
LP K E IK + GL K + R +TK IL+ D L+N ++QLRK
Sbjct: 408 KSLPPKKE--IKIYL-GLSK-MQREWYTK-ILMKDIDVLNSAGKMDKMRLLNILMQLRKC 462
Query: 849 CNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMT 908
CNHP++F E + IVS SGK +LD++L KLK G RVL+F QMT
Sbjct: 463 CNHPYLFDGAEPG-PPYTTDEHIVSN------SGKMVVLDKLLAKLKEQGSRVLIFSQMT 515
Query: 909 QLMNILEDYFSYRGFKYMRLDGTTKAEDRGD------LL------KKFNAPDSEYFIFVL 956
+L++ILEDY +RG++Y RLDG T E+R D LL + FN P+S FIF+L
Sbjct: 516 RLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAFNVPNSSRFIFML 575
Query: 957 STRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERI 1016
STRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK VRV RL+T N+VEERI
Sbjct: 576 STRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERI 635
Query: 1017 LAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQM 1075
+ A KL +D VIQ G + DQ+S + + LQ I H + + DE + +
Sbjct: 636 VERAEIKLRLDSIVIQQGRLIDQQSNKMAKEEMLQMIRHGATHVFASKESELTDEDITTL 695
Query: 1076 LARSE----EEFQTYQRI-DAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEE 1130
L R E E + Q++ ++ R + + + E D+ K+ + +W K E
Sbjct: 696 LERGERKTAEMNERLQKMGESSLRNFRMDTEQSLYKFEGEDYREKQKLGMVEWIEPPKRE 755
Query: 1131 EKA 1133
KA
Sbjct: 756 RKA 758
Score = 45 (20.9 bits), Expect = 1.9e-126, Sum P(3) = 1.9e-126
Identities = 18/77 (23%), Positives = 30/77 (38%)
Query: 254 RAEVIACARRDTTLETAVNVKAYKRTKRQG----LKEARATEKLEKQQKVEAERKKRQKH 309
+ E A A +T T K K+ ++ LK A K EK+ E E K +
Sbjct: 35 KEEGAAAAATASTEATVATEKGEKKKEKNASPFQLKLAAKASKSEKEMDPEYEEKMKADR 94
Query: 310 QEYITTVLQHCKDFKEY 326
+ +L+ + F +
Sbjct: 95 AKRFEFLLKQTELFAHF 111
Score = 41 (19.5 bits), Expect = 1.9e-126, Sum P(3) = 1.9e-126
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E + DI+KI+ +IE G+
Sbjct: 905 FWERCNELQDIEKIMAQIERGE 926
Score = 40 (19.1 bits), Expect = 6.5e-126, Sum P(3) = 6.5e-126
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 371 DEEGYRKLIDQKKDKRLAFLLSQTD 395
D E Y + + + KR FLL QT+
Sbjct: 83 DPE-YEEKMKADRAKRFEFLLKQTE 106
>UNIPROTKB|F1RTI9 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:CU695129 Ensembl:ENSSSCT00000013830 Uniprot:F1RTI9
Length = 1073
Score = 1188 (423.3 bits), Expect = 4.0e-126, Sum P(3) = 4.0e-126
Identities = 267/603 (44%), Positives = 367/603 (60%)
Query: 550 SILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPF 609
S + G L++YQI+GL W++SL+ N +NGILADEMGLGKT+QTIAL+ YL + + GP
Sbjct: 179 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 238
Query: 610 LIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEYVIK 668
+++VP STL NW EF+RW PS+ V+ + G R ++ +M +++V +T+YE VIK
Sbjct: 239 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIK 298
Query: 669 DKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALL 728
+K K HW+Y++IDE HR+KN KL+ I+ F + +RLLLTGTPLQN L ELWALL
Sbjct: 299 EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFK-STNRLLLTGTPLQNNLHELWALL 357
Query: 729 NFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVE 788
NFLLP +F S F+ WF+ K L +++ ++ RLH VL+PFLLRR+K +VE
Sbjct: 358 NFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAVLKPFLLRRIKTDVE 407
Query: 789 SQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKL 848
LP K E IK + GL K + R +TK IL+ D L+N ++QLRK
Sbjct: 408 KSLPPKKE--IKIYL-GLSK-MQREWYTK-ILMKDIDVLNSAGKMDKMRLLNILMQLRKC 462
Query: 849 CNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMT 908
CNHP++F E + IVS SGK +LD++L KLK G RVL+F QMT
Sbjct: 463 CNHPYLFDGAEPG-PPYTTDEHIVSN------SGKMVVLDKLLAKLKEQGSRVLIFSQMT 515
Query: 909 QLMNILEDYFSYRGFKYMRLDGTTKAEDR--GDL----------LKKFNAPDSEYFIFVL 956
+L++ILEDY +RG++Y RLDG T E+R G L ++ FN P+S FIF+L
Sbjct: 516 RLLDILEDYCMWRGYEYCRLDGQTPHEERENGFLQIYFRRRREAIEAFNVPNSSRFIFML 575
Query: 957 STRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERI 1016
STRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK VRV RL+T N+VEERI
Sbjct: 576 STRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERI 635
Query: 1017 LAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQM 1075
+ A KL +D VIQ G + DQ+S + + LQ I H + + DE + +
Sbjct: 636 VERAEIKLRLDSIVIQQGRLIDQQSNKMAKEEMLQMIRHGATHVFASKESELTDEDITTL 695
Query: 1076 LARSE----EEFQTYQRI-DAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEE 1130
L R E E + Q++ ++ R + + + E D+ K+ + +W K E
Sbjct: 696 LERGERKTAEMNERLQKMGESSLRNFRMDTEQSLYKFEGEDYREKQKLGMVEWIEPPKRE 755
Query: 1131 EKA 1133
KA
Sbjct: 756 RKA 758
Score = 45 (20.9 bits), Expect = 4.0e-126, Sum P(3) = 4.0e-126
Identities = 18/77 (23%), Positives = 30/77 (38%)
Query: 254 RAEVIACARRDTTLETAVNVKAYKRTKRQG----LKEARATEKLEKQQKVEAERKKRQKH 309
+ E A A +T T K K+ ++ LK A K EK+ E E K +
Sbjct: 35 KEEGAAAAATASTEATVATEKGEKKKEKNASPFQLKLAAKASKSEKEMDPEYEEKMKADR 94
Query: 310 QEYITTVLQHCKDFKEY 326
+ +L+ + F +
Sbjct: 95 AKRFEFLLKQTELFAHF 111
Score = 41 (19.5 bits), Expect = 4.0e-126, Sum P(3) = 4.0e-126
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E + DI+KI+ +IE G+
Sbjct: 905 FWERCNELQDIEKIMAQIERGE 926
Score = 40 (19.1 bits), Expect = 1.3e-125, Sum P(3) = 1.3e-125
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 371 DEEGYRKLIDQKKDKRLAFLLSQTD 395
D E Y + + + KR FLL QT+
Sbjct: 83 DPE-YEEKMKADRAKRFEFLLKQTE 106
>RGD|1561046 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10116 "Rattus norvegicus" [GO:0000733 "DNA strand
renaturation" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0090537 "CERF
complex" evidence=ISO] [GO:2000177 "regulation of neural precursor
cell proliferation" evidence=ISO] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISO] [GO:0070615 "nucleosome-dependent ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1561046 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00947680
PRIDE:D3ZIE5 Ensembl:ENSRNOT00000068478 UCSC:RGD:1561046
ArrayExpress:D3ZIE5 Uniprot:D3ZIE5
Length = 1034
Score = 1178 (419.7 bits), Expect = 8.2e-126, Sum P(3) = 8.2e-126
Identities = 269/607 (44%), Positives = 369/607 (60%)
Query: 550 SILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPF 609
S + G L++YQI+GL W++SL+ N +NGILADEMGLGKT+QTIAL+ YL + GP
Sbjct: 156 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNFPGPH 215
Query: 610 LIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEYVIK 668
+++VP STL NW EF+RW PS+ V+ + G +R ++ +M +++V +T+YE VIK
Sbjct: 216 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMPGEWDVCVTSYEMVIK 275
Query: 669 DKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALL 728
+K K HW+Y++IDE HR+KN KL+ I+ F + +RLLLTGTPLQN L ELWALL
Sbjct: 276 EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFK-STNRLLLTGTPLQNNLHELWALL 334
Query: 729 NFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVE 788
NFLLP +F S F+ WF+ K L +++ ++ RLH VL+PFLLRR+K +VE
Sbjct: 335 NFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAVLKPFLLRRIKTDVE 384
Query: 789 SQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKL 848
LP K E IK + GL K + R +TK IL+ D L+N ++QLRK
Sbjct: 385 KSLPPKKE--IKIYL-GLSK-MQREWYTK-ILMKDIDVLNSSGKMDKMRLLNILMQLRKC 439
Query: 849 CNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMT 908
CNHP++F E + IVS SGK LD++L ++K G RVL+F QMT
Sbjct: 440 CNHPYLFDGAEPG-PPYTTDEHIVSN------SGKMVALDKLLARIKEQGSRVLIFSQMT 492
Query: 909 QLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL------------LKKFNAPDSEYFIFVL 956
+L++ILEDY +RG++Y RLDG T E+R +L ++ FNAP+S FIF+L
Sbjct: 493 RLLDILEDYCMWRGYEYCRLDGQTPHEERENLFLHKHNLFSTEAIEAFNAPNSSKFIFML 552
Query: 957 STRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERI 1016
STRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK VRV RL+T N+VEERI
Sbjct: 553 STRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERI 612
Query: 1017 LAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQM 1075
+ A KL +D VIQ G + DQ+S + + LQ I H + + DE + +
Sbjct: 613 VERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFACKESELTDEDIVTI 672
Query: 1076 LARSEEEFQTYQRIDAERRKEQGKKS----RL-IEVS----ELPDWLIKEDEEIEQWAFE 1126
L R E++ ER ++ G+ S R+ +E S E D+ K+ +W
Sbjct: 673 LERGEKKTAEMN----ERMQKMGESSLRNFRMDLEQSLYKFEGEDYREKQKLGTVEWIEP 728
Query: 1127 AKEEEKA 1133
K E KA
Sbjct: 729 PKRERKA 735
Score = 52 (23.4 bits), Expect = 8.2e-126, Sum P(3) = 8.2e-126
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 272 NVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEY 326
N K+ K T LK A T K EK+ E E K + + +L+ + F +
Sbjct: 34 NFKSVKITSPFQLKLAAKTSKSEKEMDPEYEEKMKADRAKRFEFLLKQTELFAHF 88
Score = 41 (19.5 bits), Expect = 8.2e-126, Sum P(3) = 8.2e-126
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E + DI+KI+ +IE G+
Sbjct: 882 FWERCNELQDIEKIMAQIERGE 903
Score = 40 (19.1 bits), Expect = 1.5e-124, Sum P(3) = 1.5e-124
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 371 DEEGYRKLIDQKKDKRLAFLLSQTD 395
D E Y + + + KR FLL QT+
Sbjct: 60 DPE-YEEKMKADRAKRFEFLLKQTE 83
>GENEDB_PFALCIPARUM|PFB0730w [details] [associations]
symbol:PFB0730w "DNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0006338 GO:GO:0016514 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS
PIR:F71607 RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 822 (294.4 bits), Expect = 1.7e-124, Sum P(5) = 1.7e-124
Identities = 165/332 (49%), Positives = 223/332 (67%)
Query: 534 YYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTI 593
YY+I+H V E V +Q SIL+ G+L +YQ++GLEW+VSL+NNNL+GILADEMGLGKTIQTI
Sbjct: 862 YYNISHVVKEKV-KQPSILIGGELMKYQLEGLEWLVSLYNNNLHGILADEMGLGKTIQTI 920
Query: 594 ALITYLME-KKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
+L YL E K +N LIIVPLSTL NW EF RW PS+NV+ Y+G+ RK + ++
Sbjct: 921 SLFAYLKEFKNNINVKNLIIVPLSTLPNWISEFNRWCPSLNVITYRGNKLERKHIAKKLL 980
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
F++ +TT++ VIK+K L K+ W Y+++DEGHRMKN+ + H+ + + + +R+LL
Sbjct: 981 EQTFDICITTFDLVIKEKSFLMKISWNYIVVDEGHRMKNNKSRF-HVFLSEFKSKYRILL 1039
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVE-LNEEETILIIRRL 771
TGTPLQN L ELW+LLNFLLP IF S FE+WF + E + EEE +LII RL
Sbjct: 1040 TGTPLQNNLSELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDVYEHITEEEQLLIINRL 1099
Query: 772 HKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXX 831
H VL PF+LRR+KK+V LP K EY I ++S QK+LY+ + TKG +
Sbjct: 1100 HSVLLPFMLRRVKKDVLKSLPKKYEYNIHIELSLYQKILYKQIQTKGF-----KQVNHNG 1154
Query: 832 XXXXXXLMNTIVQLRKLCNHPFMF---QNIEE 860
N ++QLRK+ NHP++F NI+E
Sbjct: 1155 SITTKIFQNIVMQLRKIVNHPYLFLYDYNIDE 1186
Score = 368 (134.6 bits), Expect = 2.5e-62, Sum P(5) = 2.5e-62
Identities = 91/251 (36%), Positives = 138/251 (54%)
Query: 698 HILNTFYVAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKV 757
H+ + + + +R+LLTGTPLQN L ELW+LLNFLLP IF S FE+WF +
Sbjct: 1025 HVFLSEFKSKYRILLTGTPLQNNLSELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDVY 1084
Query: 758 ELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK 817
E EE L+I +++ L LL + + V+ + + + ++ ++ LY+ + K
Sbjct: 1085 EHITEEEQLLI--INR-LHSVLLPFMLRRVKKDVLKSLPKKYEYNIH-IELSLYQKILYK 1140
Query: 818 GILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMF---QNIEEKFSDHVGGSGIVSG 874
I + N ++QLRK+ NHP++F NI+E
Sbjct: 1141 QIQTKGFKQVNHNGSITTKIFQNIVMQLRKIVNHPYLFLYDYNIDE-------------- 1186
Query: 875 PDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKA 934
++ + SGKFE+LDR+LPKL H+VL+F QMT+LMNIL DY +RG+KY RLDG
Sbjct: 1187 -NIIKCSGKFEVLDRMLPKLLKFKHKVLIFSQMTKLMNILCDYLEFRGYKYHRLDGNIGL 1245
Query: 935 EDRGDLLKKFN 945
++R ++ +FN
Sbjct: 1246 QERKKIIDQFN 1256
Score = 342 (125.4 bits), Expect = 1.7e-124, Sum P(5) = 1.7e-124
Identities = 69/153 (45%), Positives = 105/153 (68%)
Query: 942 KKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 1001
K N + + IF+LSTR+G LGLNLQTADTVIIFDSD+NPHQD+QA R HRIGQKN V
Sbjct: 1394 KNVNGGNQDAMIFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDIQAMCRCHRIGQKNVV 1453
Query: 1002 RVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDE 1061
+V R +T++ VEE + A++KL++++KVIQAG+F++ +R L+ I+ ++ + D
Sbjct: 1454 KVFRFITLSGVEELVFKKAQHKLSINDKVIQAGLFNKIYNDEDRQNKLKDIIQRNQKNDM 1513
Query: 1062 EENAVPDDETVNQMLARSEEEFQTYQRIDAERR 1094
+ + +N + R+EEE + + +D ++R
Sbjct: 1514 TTHPT-NPLLLNYYMKRNEEELEYF--LDFDKR 1543
Score = 71 (30.1 bits), Expect = 1.7e-124, Sum P(5) = 1.7e-124
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 367 LMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLT 402
L D E Y KLI K+KRL LL T+++++N++
Sbjct: 737 LKDNDIEAYMKLIKTAKNKRLQELLDVTEQFLNNMS 772
Score = 68 (29.0 bits), Expect = 1.7e-124, Sum P(5) = 1.7e-124
Identities = 28/123 (22%), Positives = 55/123 (44%)
Query: 190 NIPKPEGLDPLIILQ-ERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLN 248
+IPK +I + ER+N++ I+ I+ +N L EHL+++ + E+ + LN
Sbjct: 15 SIPKEYKTQDMIEGEKERKNKI---IKEYIKNMNEEDFLYLSEHLKIRIDNEIFMSQELN 71
Query: 249 FQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQK 308
++I ++K LK R E L++++K + E K + K
Sbjct: 72 DYINKHIDIICELHFKNFKRPKTHMKKVFIDLTLKLKYLRHLEYLKRKKKKDKENKSKSK 131
Query: 309 HQE 311
++
Sbjct: 132 KEK 134
Score = 64 (27.6 bits), Expect = 2.8e-93, Sum P(4) = 2.8e-93
Identities = 26/115 (22%), Positives = 49/115 (42%)
Query: 1053 LHQDDEEDEEENAVPD--DETVN-QMLARSEEEFQTY---QRIDAERRKEQGKKSRLIEV 1106
++ E+D+ D D +N +M + EE++ + + + K K ++LI
Sbjct: 1742 IYMSSEKDDTTKEYSDTHDPYINDKMQVKDEEDYYGFILKEENQNDIEKILIKSNKLINK 1801
Query: 1107 SELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
ELP +L +D K K +++ ++ LTEK++LK I
Sbjct: 1802 DELPAYLFYDDTNDSPDKINLKRSRKVININLMQEEK--------LTEKQFLKLI 1848
Score = 59 (25.8 bits), Expect = 9.3e-93, Sum P(4) = 9.3e-93
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 1024 LNMDEKVIQAGMFDQKSTGS--ERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEE 1081
LN++ + +G F S E +L +I+ ++ +E+E E DDE NQ R++E
Sbjct: 1556 LNVEN--VDSGQFTYMSEDEKEENETYLSSIIKKEKKEEEGE----DDEE-NQR-DRNKE 1607
Query: 1082 EFQTYQRIDAERRKEQGK 1099
E Q + D ++ K++ K
Sbjct: 1608 EDQDEDK-DDDKDKDKDK 1624
Score = 44 (20.5 bits), Expect = 9.5e-117, Sum P(4) = 9.5e-117
Identities = 18/57 (31%), Positives = 24/57 (42%)
Query: 285 KEARATEKLEKQQKVEAERK--KRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNK 339
KE R KL K +EA K K K++ LQ D E NN ++ + K
Sbjct: 728 KEERERMKLLKDNDIEAYMKLIKTAKNKR-----LQELLDVTEQFLNNMSKCVLYQK 779
Score = 41 (19.5 bits), Expect = 1.7e-124, Sum P(5) = 1.7e-124
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 1307 EDSVVLESVFTKARQRVESGEDPDE 1331
E+ L S+ K ++ E GED +E
Sbjct: 1576 ENETYLSSIIKKEKKE-EEGEDDEE 1599
Score = 38 (18.4 bits), Expect = 1.5e-90, Sum P(4) = 1.5e-90
Identities = 7/41 (17%), Positives = 24/41 (58%)
Query: 1055 QDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRK 1095
+DDEE++ + +D+ ++ + +++ + + + ++RK
Sbjct: 1595 EDDEENQRDRNKEEDQDEDKDDDKDKDKDKDKEEEEEKKRK 1635
>UNIPROTKB|O96239 [details] [associations]
symbol:PFB0730w "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006338
GO:GO:0016514 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS PIR:F71607
RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 822 (294.4 bits), Expect = 1.7e-124, Sum P(5) = 1.7e-124
Identities = 165/332 (49%), Positives = 223/332 (67%)
Query: 534 YYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTI 593
YY+I+H V E V +Q SIL+ G+L +YQ++GLEW+VSL+NNNL+GILADEMGLGKTIQTI
Sbjct: 862 YYNISHVVKEKV-KQPSILIGGELMKYQLEGLEWLVSLYNNNLHGILADEMGLGKTIQTI 920
Query: 594 ALITYLME-KKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK 652
+L YL E K +N LIIVPLSTL NW EF RW PS+NV+ Y+G+ RK + ++
Sbjct: 921 SLFAYLKEFKNNINVKNLIIVPLSTLPNWISEFNRWCPSLNVITYRGNKLERKHIAKKLL 980
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
F++ +TT++ VIK+K L K+ W Y+++DEGHRMKN+ + H+ + + + +R+LL
Sbjct: 981 EQTFDICITTFDLVIKEKSFLMKISWNYIVVDEGHRMKNNKSRF-HVFLSEFKSKYRILL 1039
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVE-LNEEETILIIRRL 771
TGTPLQN L ELW+LLNFLLP IF S FE+WF + E + EEE +LII RL
Sbjct: 1040 TGTPLQNNLSELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDVYEHITEEEQLLIINRL 1099
Query: 772 HKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXX 831
H VL PF+LRR+KK+V LP K EY I ++S QK+LY+ + TKG +
Sbjct: 1100 HSVLLPFMLRRVKKDVLKSLPKKYEYNIHIELSLYQKILYKQIQTKGF-----KQVNHNG 1154
Query: 832 XXXXXXLMNTIVQLRKLCNHPFMF---QNIEE 860
N ++QLRK+ NHP++F NI+E
Sbjct: 1155 SITTKIFQNIVMQLRKIVNHPYLFLYDYNIDE 1186
Score = 368 (134.6 bits), Expect = 2.5e-62, Sum P(5) = 2.5e-62
Identities = 91/251 (36%), Positives = 138/251 (54%)
Query: 698 HILNTFYVAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKV 757
H+ + + + +R+LLTGTPLQN L ELW+LLNFLLP IF S FE+WF +
Sbjct: 1025 HVFLSEFKSKYRILLTGTPLQNNLSELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDVY 1084
Query: 758 ELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK 817
E EE L+I +++ L LL + + V+ + + + ++ ++ LY+ + K
Sbjct: 1085 EHITEEEQLLI--INR-LHSVLLPFMLRRVKKDVLKSLPKKYEYNIH-IELSLYQKILYK 1140
Query: 818 GILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMF---QNIEEKFSDHVGGSGIVSG 874
I + N ++QLRK+ NHP++F NI+E
Sbjct: 1141 QIQTKGFKQVNHNGSITTKIFQNIVMQLRKIVNHPYLFLYDYNIDE-------------- 1186
Query: 875 PDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKA 934
++ + SGKFE+LDR+LPKL H+VL+F QMT+LMNIL DY +RG+KY RLDG
Sbjct: 1187 -NIIKCSGKFEVLDRMLPKLLKFKHKVLIFSQMTKLMNILCDYLEFRGYKYHRLDGNIGL 1245
Query: 935 EDRGDLLKKFN 945
++R ++ +FN
Sbjct: 1246 QERKKIIDQFN 1256
Score = 342 (125.4 bits), Expect = 1.7e-124, Sum P(5) = 1.7e-124
Identities = 69/153 (45%), Positives = 105/153 (68%)
Query: 942 KKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 1001
K N + + IF+LSTR+G LGLNLQTADTVIIFDSD+NPHQD+QA R HRIGQKN V
Sbjct: 1394 KNVNGGNQDAMIFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDIQAMCRCHRIGQKNVV 1453
Query: 1002 RVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDE 1061
+V R +T++ VEE + A++KL++++KVIQAG+F++ +R L+ I+ ++ + D
Sbjct: 1454 KVFRFITLSGVEELVFKKAQHKLSINDKVIQAGLFNKIYNDEDRQNKLKDIIQRNQKNDM 1513
Query: 1062 EENAVPDDETVNQMLARSEEEFQTYQRIDAERR 1094
+ + +N + R+EEE + + +D ++R
Sbjct: 1514 TTHPT-NPLLLNYYMKRNEEELEYF--LDFDKR 1543
Score = 71 (30.1 bits), Expect = 1.7e-124, Sum P(5) = 1.7e-124
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 367 LMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLT 402
L D E Y KLI K+KRL LL T+++++N++
Sbjct: 737 LKDNDIEAYMKLIKTAKNKRLQELLDVTEQFLNNMS 772
Score = 68 (29.0 bits), Expect = 1.7e-124, Sum P(5) = 1.7e-124
Identities = 28/123 (22%), Positives = 55/123 (44%)
Query: 190 NIPKPEGLDPLIILQ-ERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLN 248
+IPK +I + ER+N++ I+ I+ +N L EHL+++ + E+ + LN
Sbjct: 15 SIPKEYKTQDMIEGEKERKNKI---IKEYIKNMNEEDFLYLSEHLKIRIDNEIFMSQELN 71
Query: 249 FQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQK 308
++I ++K LK R E L++++K + E K + K
Sbjct: 72 DYINKHIDIICELHFKNFKRPKTHMKKVFIDLTLKLKYLRHLEYLKRKKKKDKENKSKSK 131
Query: 309 HQE 311
++
Sbjct: 132 KEK 134
Score = 64 (27.6 bits), Expect = 2.8e-93, Sum P(4) = 2.8e-93
Identities = 26/115 (22%), Positives = 49/115 (42%)
Query: 1053 LHQDDEEDEEENAVPD--DETVN-QMLARSEEEFQTY---QRIDAERRKEQGKKSRLIEV 1106
++ E+D+ D D +N +M + EE++ + + + K K ++LI
Sbjct: 1742 IYMSSEKDDTTKEYSDTHDPYINDKMQVKDEEDYYGFILKEENQNDIEKILIKSNKLINK 1801
Query: 1107 SELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
ELP +L +D K K +++ ++ LTEK++LK I
Sbjct: 1802 DELPAYLFYDDTNDSPDKINLKRSRKVININLMQEEK--------LTEKQFLKLI 1848
Score = 59 (25.8 bits), Expect = 9.3e-93, Sum P(4) = 9.3e-93
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 1024 LNMDEKVIQAGMFDQKSTGS--ERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEE 1081
LN++ + +G F S E +L +I+ ++ +E+E E DDE NQ R++E
Sbjct: 1556 LNVEN--VDSGQFTYMSEDEKEENETYLSSIIKKEKKEEEGE----DDEE-NQR-DRNKE 1607
Query: 1082 EFQTYQRIDAERRKEQGK 1099
E Q + D ++ K++ K
Sbjct: 1608 EDQDEDK-DDDKDKDKDK 1624
Score = 44 (20.5 bits), Expect = 9.5e-117, Sum P(4) = 9.5e-117
Identities = 18/57 (31%), Positives = 24/57 (42%)
Query: 285 KEARATEKLEKQQKVEAERK--KRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNK 339
KE R KL K +EA K K K++ LQ D E NN ++ + K
Sbjct: 728 KEERERMKLLKDNDIEAYMKLIKTAKNKR-----LQELLDVTEQFLNNMSKCVLYQK 779
Score = 41 (19.5 bits), Expect = 1.7e-124, Sum P(5) = 1.7e-124
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 1307 EDSVVLESVFTKARQRVESGEDPDE 1331
E+ L S+ K ++ E GED +E
Sbjct: 1576 ENETYLSSIIKKEKKE-EEGEDDEE 1599
Score = 38 (18.4 bits), Expect = 1.5e-90, Sum P(4) = 1.5e-90
Identities = 7/41 (17%), Positives = 24/41 (58%)
Query: 1055 QDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRK 1095
+DDEE++ + +D+ ++ + +++ + + + ++RK
Sbjct: 1595 EDDEENQRDRNKEEDQDEDKDDDKDKDKDKDKEEEEEKKRK 1635
>TAIR|locus:2062999 [details] [associations]
symbol:BRM "AT2G46020" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0010199 "organ boundary specification between
lateral organs and the meristem" evidence=IGI] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=NAS;TAS] [GO:0040029
"regulation of gene expression, epigenetic" evidence=RCA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00951
GO:GO:0005829 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0004386
EMBL:AC005397 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 EMBL:AC004665
EMBL:AJ703891 IPI:IPI00529654 IPI:IPI00541940 PIR:G84897
RefSeq:NP_182126.2 RefSeq:NP_973695.1 UniGene:At.48598
ProteinModelPortal:Q6EVK6 SMR:Q6EVK6 IntAct:Q6EVK6 STRING:Q6EVK6
PaxDb:Q6EVK6 PRIDE:Q6EVK6 EnsemblPlants:AT2G46020.2 GeneID:819210
KEGG:ath:AT2G46020 TAIR:At2g46020 HOGENOM:HOG000029719
InParanoid:Q6EVK6 KO:K11647 OMA:EMNAPKE PhylomeDB:Q6EVK6
ProtClustDB:CLSN2681222 ArrayExpress:Q6EVK6 Genevestigator:Q6EVK6
GO:GO:0010199 GO:GO:0040029 Uniprot:Q6EVK6
Length = 2193
Score = 1112 (396.5 bits), Expect = 1.4e-123, Sum P(4) = 1.4e-123
Identities = 256/618 (41%), Positives = 362/618 (58%)
Query: 534 YYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTI 593
YY++AH V+E+V Q S+L G L++YQ+ GL+WM+SL+NN LNGILADEMGLGKT+Q +
Sbjct: 958 YYTLAHAVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVM 1017
Query: 594 ALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQ-MK 652
ALI YLME K GP LIIVP + L NW E W PSV+ + Y G+ R L +Q +
Sbjct: 1018 ALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEVC 1077
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
A KFNVL+TTYE+++ D+ L+K+ WKY+IIDE RMK+ L L+ Y RLLL
Sbjct: 1078 AMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDR-YRCQRRLLL 1136
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTG--EKVE---LNEEETILI 767
TGTPLQN L ELW+LLN LLP +F + F WF PF G +E L E+ +++
Sbjct: 1137 TGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIV 1196
Query: 768 IRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEX 827
I RLH++L PF+LRR ++VE LP KV +++C MS +Q +Y + G L D +
Sbjct: 1197 IHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDE 1256
Query: 828 XXXX-------XXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRV 880
L N ++LRK CNHP + N F+D S L R
Sbjct: 1257 KLRAQKNPIYQAKIYRTLNNRCMELRKACNHPLL--NYPY-FNDF-------SKDFLVRS 1306
Query: 881 SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL 940
GK +LDRIL KL+ TGHRVLLF MT+L++ILE+Y +R Y R+DGTT EDR
Sbjct: 1307 CGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESA 1366
Query: 941 LKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 1000
+ FN PD++ FIF+LS RA G GLNLQTADTV+I+D D NP + QA RAHRIGQ E
Sbjct: 1367 IVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTRE 1426
Query: 1001 VRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKS--TGSERH-QFLQTILHQDD 1057
V+V+ + +V E++ ++ K ++++ G D + G +R+ ++ ++ +
Sbjct: 1427 VKVIYM---EAVVEKL--SSHQK---EDELRSGGSVDLEDDMAGKDRYIGSIEGLIRNNI 1478
Query: 1058 EEDEEENAVPDDETVN----QMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWL 1113
++ + + A DE +N EE T + + + + Q + + E+ +
Sbjct: 1479 QQYKIDMA---DEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLHEVNRMI 1535
Query: 1114 IKEDEEIEQWAFEAKEEE 1131
+ +EE+E F+ +EE
Sbjct: 1536 ARSEEEVE--LFDQMDEE 1551
Score = 90 (36.7 bits), Expect = 1.4e-123, Sum P(4) = 1.4e-123
Identities = 47/196 (23%), Positives = 90/196 (45%)
Query: 218 IEELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLR-AEVIACARRDTTLETAVNVKAY 276
++++NG L L E R++ ++ LR L++ +++LR +++ + R + + +
Sbjct: 705 LKKINGLLAKNL-ERKRIRPDLVLR-LQIE--EKKLRLSDLQSRVREEVDRQQQEIMSMP 760
Query: 277 KRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYH-RNNQARIM 335
R R+ ++ ++LE ++V A +K ++ Q + T+ Q K E H AR
Sbjct: 761 DRPYRKFVRLCER-QRLEMNRQVLANQKAVREKQ--LKTIFQWRKKLLEAHWAIRDARTA 817
Query: 336 RLNKAVMNYHANAXXXXXXXXXXXXXXXXXXLMAEDEEGYRK-LIDQKKD------KRLA 388
R N+ V YH L D E YR+ L++Q+ + +R A
Sbjct: 818 R-NRGVAKYHEKMLREFSKRKDDGRNKRMEALKNNDVERYREMLLEQQTNMPGDAAERYA 876
Query: 389 FL---LSQTDEYISNL 401
L L+QT++Y+ L
Sbjct: 877 VLSSFLTQTEDYLHKL 892
Score = 57 (25.1 bits), Expect = 1.4e-123, Sum P(4) = 1.4e-123
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 89 KHAFTSAQVQQLRFQIMAYRLLARNQ-PLTPQLAMGVQGKRME 130
+ FT Q+ L+ QI+A+R L + + L P+L + +E
Sbjct: 461 RSGFTKQQLHVLKAQILAFRRLKKGEGSLPPELLQAISPPPLE 503
Score = 51 (23.0 bits), Expect = 1.4e-123, Sum P(4) = 1.4e-123
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 1260 IDRPMDIKKILGRIEDGKYSSVDELQKDFKTLCRNA-QIY 1298
++ +++++I R+E +Y+ V EL D + + R A Q Y
Sbjct: 1942 VNNLLELREIDHRVERLEYAGVMELASDVQLMLRGAMQFY 1981
Score = 39 (18.8 bits), Expect = 1.2e-114, Sum P(3) = 1.2e-114
Identities = 6/27 (22%), Positives = 20/27 (74%)
Query: 284 LKEARATEKLEKQQKVEAERKKRQKHQ 310
+++ + ++ ++QQ+ A R+++Q+H+
Sbjct: 38 VQQQQQQQQQQQQQQQLASRQQQQQHR 64
>SGD|S000000966 [details] [associations]
symbol:CHD1 "Chromatin remodeler that regulates various
aspects of transcription" species:4932 "Saccharomyces cerevisiae"
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0042766
"nucleosome mobilization" evidence=IDA] [GO:0000182 "rDNA binding"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IDA] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IGI;IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IDA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IMP]
[GO:0071441 "negative regulation of histone H3-K14 acetylation"
evidence=IMP] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI;IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0031490 "chromatin DNA binding"
evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IDA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IGI;IMP] [GO:0071894 "histone H2B conserved C-terminal
lysine ubiquitination" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:2000104 "negative regulation of DNA-dependent DNA replication"
evidence=IGI] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SGD:S000000966 Pfam:PF00385 GO:GO:0005739
GO:GO:0005524 GO:GO:2000104 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:BK006939 GO:GO:0000124 GO:GO:0046695 GO:GO:0004386
GO:GO:0034401 GO:GO:0006368 GO:GO:0035064 GO:GO:0031490
GO:GO:0042766 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
GO:GO:0016584 EMBL:U18917 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GO:GO:0006363 GO:GO:0008094 GO:GO:0006369
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 PIR:S30818 RefSeq:NP_011091.1
PDB:2DY7 PDB:2DY8 PDB:2H1E PDB:2XB0 PDB:3MWY PDB:3TED PDBsum:2DY7
PDBsum:2DY8 PDBsum:2H1E PDBsum:2XB0 PDBsum:3MWY PDBsum:3TED
ProteinModelPortal:P32657 SMR:P32657 DIP:DIP-6362N IntAct:P32657
MINT:MINT-618890 STRING:P32657 PaxDb:P32657 PeptideAtlas:P32657
EnsemblFungi:YER164W GeneID:856911 KEGG:sce:YER164W CYGD:YER164w
OMA:IKWQFMA OrthoDB:EOG4TF3TB SABIO-RK:P32657
EvolutionaryTrace:P32657 NextBio:983353 Genevestigator:P32657
GermOnline:YER164W GO:GO:0030874 GO:GO:0000182 GO:GO:0071441
GO:GO:2000616 GO:GO:0001178 Uniprot:P32657
Length = 1468
Score = 1076 (383.8 bits), Expect = 4.5e-115, Sum P(3) = 4.5e-115
Identities = 229/511 (44%), Positives = 326/511 (63%)
Query: 543 EIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEK 602
E ++ Q + G+L+++Q+ G+ WM L++ NGILADEMGLGKT+QT+A I++L+
Sbjct: 362 EKLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFA 421
Query: 603 KKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQ----------MK 652
++ NGP +I+VPLST+ W FE+WAP +N + Y G+ R T++ K
Sbjct: 422 RRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKK 481
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
KFNVLLTTYEY++KD+ L + W++M +DE HR+KN L LN+F VA +R+L+
Sbjct: 482 TMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVA-NRMLI 540
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 772
TGTPLQN + EL AL+NFL+P F T +Q + F E+ +EE I LH
Sbjct: 541 TGTPLQNNIKELAALVNFLMPGRF----TIDQEID--FENQDEE----QEE---YIHDLH 587
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXX 831
+ ++PF+LRRLKK+VE LP K E I++ ++S +Q Y+++ TK LT G++
Sbjct: 588 RRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFS 647
Query: 832 XXXXXXLMNTIVQLRKLCNHPFMFQNIEE----KFSD-HVGGSGIVSGPDLYRVSGKFEL 886
L+N + +L+K NHP++F N EE KF D + ++ G L SGK L
Sbjct: 648 ------LLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRG--LIMSSGKMVL 699
Query: 887 LDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNA 946
LD++L +LK GHRVL+F QM ++++IL DY S +G + RLDGT + R + FN+
Sbjct: 700 LDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNS 759
Query: 947 PDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 1006
PDS F+F+LSTRAGGLG+NL TADTV+IFDSDWNP DLQA RAHRIGQKN V V RL
Sbjct: 760 PDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRL 819
Query: 1007 MTVNSVEERILAAARYKLNMDEKVIQAGMFD 1037
++ ++VEE +L AR K+ ++ +I G+ D
Sbjct: 820 VSKDTVEEEVLERARKKMILEYAIISLGVTD 850
Score = 56 (24.8 bits), Expect = 4.5e-115, Sum P(3) = 4.5e-115
Identities = 19/77 (24%), Positives = 34/77 (44%)
Query: 1080 EEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRG 1139
EEE + Q + +R+ E+ K +L ++ + L K + A + R
Sbjct: 938 EEELKKLQDEEQKRKDEEYVKEQLEMMNRRDNALKKIKNSVNGDGTAANSDSDDDSTSRS 997
Query: 1140 SRQRKQVDYTDSLTEKE 1156
SR+R + + DS+ E E
Sbjct: 998 SRRRARANDMDSIGESE 1014
Score = 37 (18.1 bits), Expect = 4.5e-115, Sum P(3) = 4.5e-115
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 1262 RPMDIKKILGRIEDGKY 1278
+ ++ + +L R+ED KY
Sbjct: 1126 KSLNAESLLSRVEDLKY 1142
>CGD|CAL0001390 [details] [associations]
symbol:orf19.3035 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0030874 "nucleolar chromatin" evidence=IEA] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0071441 "negative regulation of histone H3-K14
acetylation" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0060303 "regulation
of nucleosome density" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:2000104 "negative regulation of
DNA-dependent DNA replication" evidence=IEA] [GO:0042766
"nucleosome mobilization" evidence=IEA] [GO:0001178 "regulation of
transcriptional start site selection at RNA polymerase II promoter"
evidence=IEA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0000182 "rDNA
binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 CGD:CAL0001390
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:AACQ01000017
EMBL:AACQ01000015 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907 KO:K11367
RefSeq:XP_721262.1 RefSeq:XP_721533.1 ProteinModelPortal:Q5AI17
STRING:Q5AI17 GeneID:3636889 GeneID:3637077 KEGG:cal:CaO19.10553
KEGG:cal:CaO19.3035 Uniprot:Q5AI17
Length = 1410
Score = 1078 (384.5 bits), Expect = 3.1e-114, Sum P(3) = 3.1e-114
Identities = 248/610 (40%), Positives = 366/610 (60%)
Query: 543 EIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEK 602
E + +Q + NG+L+++Q+ GL WM L++ N NGILADEMGLGKT+QT+A +++L+
Sbjct: 348 EKLFKQPVFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYA 407
Query: 603 KKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA-----QMKASKFN 657
++ NGP L++VPLST+ W FE+WAP VN V Y G+ RKT++ Q + KFN
Sbjct: 408 RRQNGPHLVVVPLSTVPAWQETFEKWAPDVNCVYYLGNGEARKTIREYELYNQNRKPKFN 467
Query: 658 VLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPL 717
VLLTTYEY++KDK L W+++ +DE HR+KN L L F V+ +RLL+TGTPL
Sbjct: 468 VLLTTYEYILKDKNELGAFKWQFLAVDEAHRLKNAESSLYEALKGFKVS-NRLLITGTPL 526
Query: 718 QNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRP 777
QN + EL AL NFL+P F T +Q + F T ++ +E+ I+ L K + P
Sbjct: 527 QNNVKELAALCNFLMPGKF----TIDQEID--FET----IDSEQEQ---YIKDLQKKISP 573
Query: 778 FLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXX 837
F+LRRLKK+VE LP K E I++ ++S +Q Y+++ TK +
Sbjct: 574 FILRRLKKDVEKSLPSKSERILRVELSDIQTEYYKNIITKNYAALNAGNRGSQIS----- 628
Query: 838 LMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSG-PDLYRVSGKFELLDRILPKLKS 896
L+N + +L+K NHP++F E+K D G + + SGK LL+++L +L+
Sbjct: 629 LLNIMSELKKASNHPYLFDGAEDKVLDKAGSPSRENTLKGIVMSSGKMVLLEQLLSRLRK 688
Query: 897 TGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVL 956
GHRVL+F QM ++++IL DY +G+++ RLDGT + R + FNAP S+ F F+L
Sbjct: 689 EGHRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTVPSSKRKIAIDHFNAPGSKDFAFLL 748
Query: 957 STRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERI 1016
STRAGGLG+NL TADTVIIFDSDWNP DLQA RAHRIGQKN V V R ++ ++VEE+I
Sbjct: 749 STRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVSVYRFVSKDTVEEQI 808
Query: 1017 LAAARYKLNMDEKVIQAGMFDQKS-TGS-------ERHQFLQ----TILHQDDEEDEEEN 1064
L AR K+ ++ +I G+ D + GS E Q L+ T+ +++ + + EN
Sbjct: 809 LERARKKMVLEYAIISLGITDPSAKNGSKTEPSTNELSQILKFGAGTMFKENNNQQKLEN 868
Query: 1065 AVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELP-DWLIKEDEEIEQW 1123
DD +L+ +E+ T + ++ E+ K EV++ D ++ D+ I Q
Sbjct: 869 LNLDD-----VLSHAEDHVTTPELGESNLGSEEFLKQ--FEVTDYKAD--VEWDDIIPQE 919
Query: 1124 AF-EAKEEEK 1132
+ K+EEK
Sbjct: 920 ELTKLKDEEK 929
Score = 43 (20.2 bits), Expect = 3.1e-114, Sum P(3) = 3.1e-114
Identities = 11/51 (21%), Positives = 26/51 (50%)
Query: 1071 TVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLI--EVSELPDWLIKEDEE 1119
+ ++ L + EE + + ER+ E+ K+ + E ++ W+ K+ E+
Sbjct: 1032 STSKQLVKEEEARRAVVLAELERKAEEQKRRPPVPGEPNQTALWIAKKKEK 1082
Score = 40 (19.1 bits), Expect = 3.1e-114, Sum P(3) = 3.1e-114
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 428 KQKLMDT--DGKVTLDQDETSQLTD 450
K+K+ D DG +++D+DE + D
Sbjct: 46 KKKVQDDYEDG-ISMDEDENDEFGD 69
Score = 40 (19.1 bits), Expect = 3.1e-114, Sum P(3) = 3.1e-114
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 268 ETAVNVKAY--KRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEY 312
E +N + Y +R+ R+ + A + + ++ V RKK++ +Y
Sbjct: 9 EAELNPELYGLRRSHRE--RRGPAIVESDSEEDVAPSRKKKKVQDDY 53
>UNIPROTKB|H0YGM3 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:AC011442
EMBL:AC011485 EMBL:AC006127 HGNC:HGNC:11100 ChiTaRS:SMARCA4
PRIDE:H0YGM3 Ensembl:ENST00000538456 Bgee:H0YGM3 Uniprot:H0YGM3
Length = 427
Score = 888 (317.7 bits), Expect = 4.3e-111, Sum P(2) = 4.3e-111
Identities = 176/243 (72%), Positives = 205/243 (84%)
Query: 923 FKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNP 982
FKY+RLDGTTKAEDRG LLK FN P SEYFIF+LSTRAGGLGLNLQ+ADTVIIFDSDWNP
Sbjct: 1 FKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNP 60
Query: 983 HQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTG 1042
HQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+
Sbjct: 61 HQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSS 120
Query: 1043 SERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGK--- 1099
ER FLQ IL + +E+DEEE+ VPDDETVNQM+AR EEEF + R+D +RR+E+ +
Sbjct: 121 HERRAFLQAIL-EHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPK 179
Query: 1100 -KSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWL 1158
K RL+E ELP W+IK+D E+E+ E +EEEK GRGSR RK+VDY+DSLTEK+WL
Sbjct: 180 RKPRLMEEDELPSWIIKDDAEVERLTCE-EEEEKMF--GRGSRHRKEVDYSDSLTEKQWL 236
Query: 1159 KAI 1161
K I
Sbjct: 237 KKI 239
Score = 229 (85.7 bits), Expect = 4.3e-111, Sum P(2) = 4.3e-111
Identities = 48/81 (59%), Positives = 61/81 (75%)
Query: 1225 IMRVVIKYTDSD-GRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDE 1283
I+ VIKY DS GR LSE FI+LPSRKELP+YYE+I +P+D KKI RI + KY S+++
Sbjct: 347 IVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 406
Query: 1284 LQKDFKTLCRNAQIYNEELSL 1304
L+KD LC+NAQ +N E SL
Sbjct: 407 LEKDVMLLCQNAQTFNLEGSL 427
>TAIR|locus:2173644 [details] [associations]
symbol:CHR1 "chromatin remodeling 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IMP]
[GO:0044030 "regulation of DNA methylation" evidence=IMP]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0000786 "nucleosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IMP] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0090241 "negative regulation of
histone H4 acetylation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006344 "maintenance of chromatin silencing"
evidence=IMP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0032197 "transposition, RNA-mediated"
evidence=IMP] [GO:0006342 "chromatin silencing" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IMP;RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0016572 "histone
phosphorylation" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0004003 GO:GO:0006349 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0009294
EMBL:AB018119 GO:GO:0000786 GO:GO:0051574 GO:GO:0044030
GO:GO:0090241 GO:GO:0032197 EMBL:AF143940 EMBL:AY099638
EMBL:BT002161 EMBL:AY699010 EMBL:AY699011 IPI:IPI00524705
RefSeq:NP_201476.1 UniGene:At.28851 ProteinModelPortal:Q9XFH4
SMR:Q9XFH4 STRING:Q9XFH4 PaxDb:Q9XFH4 PRIDE:Q9XFH4
EnsemblPlants:AT5G66750.1 GeneID:836808 KEGG:ath:AT5G66750
TAIR:At5g66750 HOGENOM:HOG000172362 InParanoid:Q9XFH4 OMA:ETFYTAI
PhylomeDB:Q9XFH4 ProtClustDB:CLSN2686877 Genevestigator:Q9XFH4
GO:GO:0006344 GO:GO:0006346 Uniprot:Q9XFH4
Length = 764
Score = 1081 (385.6 bits), Expect = 2.1e-109, P = 2.1e-109
Identities = 235/552 (42%), Positives = 330/552 (59%)
Query: 540 TVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYL 599
TV ++ E +L G+LK YQ+KG++W++SL+ N LNGILAD+MGLGKTIQTI +++L
Sbjct: 185 TVIKLQNELCPLLTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHL 244
Query: 600 MEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQ-MKAS---K 655
+ ++GP+L+I PLSTLSNW E R+ PS+N + Y G + R L+ + M + K
Sbjct: 245 -KGNGLDGPYLVIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPK 303
Query: 656 FNVLLTTYEYVIKD-KGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTG 714
F +++T+YE + D K L WKY++IDEGHR+KNH CKL L + ++LLLTG
Sbjct: 304 FPIVITSYEVAMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKM-DNKLLLTG 362
Query: 715 TPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEET-ILIIRRLHK 773
TPLQN L ELW+LLNF+LP IF S FE WF+ E + EE+ ++ +LH
Sbjct: 363 TPLQNNLSELWSLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRRAQVVSKLHG 422
Query: 774 VLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXX 833
+LRPF+LRR+K +VE LP K E I+ M+ QK H+ L E
Sbjct: 423 ILRPFILRRMKCDVELSLPRKKEIIMYATMTDHQKKFQEHL-VNNTLEAHLGENAIRGQG 481
Query: 834 XXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSG-PDLYRVSGKFELLDRILP 892
L N ++QLRK CNHP + Q + GS + ++ GKF LL+R+L
Sbjct: 482 WKGKLNNLVIQLRKNCNHPDLLQG-------QIDGSYLYPPVEEIVGQCGKFRLLERLLV 534
Query: 893 KLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYF 952
+L + H+VL+F Q T+L++I++ YFS +GF+ R+DG+ K ++R +K F+ S
Sbjct: 535 RLFANNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCS 594
Query: 953 IFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSV 1012
IF+LSTRAGGLG+NL ADT I++DSDWNP DLQA DR HRIGQ V V RL T S+
Sbjct: 595 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSI 654
Query: 1013 EERILAAARYKLNMDEKVIQAGMFDQK----STGSERHQFLQTILHQDDEEDEEENAVPD 1068
E R+L A KL ++ VI G F Q+ ST E L + + ED+
Sbjct: 655 ETRVLKRAYSKLKLEHVVIGQGQFHQERAKSSTPLEEEDILALLKEDETAEDKLIQTDIS 714
Query: 1069 DETVNQMLARSE 1080
D ++++L RS+
Sbjct: 715 DADLDRLLDRSD 726
>UNIPROTKB|F1N166 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:DAAA02067438 EMBL:DAAA02067437 IPI:IPI01018574
Ensembl:ENSBTAT00000002973 Uniprot:F1N166
Length = 1078
Score = 1033 (368.7 bits), Expect = 2.7e-109, Sum P(3) = 2.7e-109
Identities = 251/611 (41%), Positives = 352/611 (57%)
Query: 550 SILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPF 609
S + G L++YQI+GL W++SL+ N +NGILADEMGLGKT+QTIAL+ YL + + GP
Sbjct: 179 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 238
Query: 610 LIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEYVIK 668
+++VP STL NW EF+RW PS+ V+ + G R ++ +M +++V +T+YE VIK
Sbjct: 239 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIK 298
Query: 669 DKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALL 728
+K K HW+Y++IDE HR+KN KL+ I+ F + +RLLLTGTPLQN L ELWALL
Sbjct: 299 EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRDFK-STNRLLLTGTPLQNNLHELWALL 357
Query: 729 NFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVE 788
NFLLP +F S F+ WF+ K L +++ ++ RLH VL+PFLLRR+K +VE
Sbjct: 358 NFLLPDVFNSAEDFDSWFDT-------KNCLGDQK---LVERLHTVLKPFLLRRIKTDVE 407
Query: 789 SQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKL 848
LP K E IK + GL K + R +TK IL+ D L+N ++QLRK
Sbjct: 408 KSLPPKKE--IKIYL-GLSK-MQREWYTK-ILMKDIDVLNSAGKMDKMRLLNILMQLRKC 462
Query: 849 CNHPFMFQNIEE----KFSDH-VGGSG--IVSGPDLYRVSGK------FELLDRILPKLK 895
CNHP++F E +H V SG +V L ++ + F + R+L L+
Sbjct: 463 CNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILE 522
Query: 896 S-TGHRVLLFCQMTQLMNILEDYFSYRGFK--YMRLDGTTKAEDRGDLLKKFNAPDSEYF 952
R +C++ E + FK + G+ +A ++ FN P+S F
Sbjct: 523 DYCMWRGYEYCRLDGQTPHEEREEILKDFKIIFHEYQGSNEA------IEAFNIPNSSKF 576
Query: 953 IFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSV 1012
IF+LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK VRV RL+T N+V
Sbjct: 577 IFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTV 636
Query: 1013 EERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDET 1071
EERI+ A KL +D VIQ G + DQ+S + + LQ I H + + DE
Sbjct: 637 EERIVERAEIKLRLDSIVIQQGRLIDQQSNKMAKEEMLQMIRHGATHVFASKESELTDED 696
Query: 1072 VNQMLARSEEEFQTYQRIDAERRKEQGKKS----RL-IEVS----ELPDWLIKEDEEIEQ 1122
+ +L R E++ ER ++ G+ S R+ IE S E D+ K+ + +
Sbjct: 697 ITTLLERGEKKTAEMN----ERLQKMGESSLRNFRMDIEQSLYKFEGEDYREKQKLGMVE 752
Query: 1123 WAFEAKEEEKA 1133
W K E KA
Sbjct: 753 WIEPPKRERKA 763
Score = 41 (19.5 bits), Expect = 2.7e-109, Sum P(3) = 2.7e-109
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E + DI+KI+ +IE G+
Sbjct: 910 FWERCNELQDIEKIMAQIERGE 931
Score = 40 (19.1 bits), Expect = 2.7e-109, Sum P(3) = 2.7e-109
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 371 DEEGYRKLIDQKKDKRLAFLLSQTD 395
D E Y + + + KR FLL QT+
Sbjct: 83 DPE-YEEKMKADRAKRFEFLLKQTE 106
Score = 40 (19.1 bits), Expect = 2.7e-109, Sum P(3) = 2.7e-109
Identities = 18/73 (24%), Positives = 27/73 (36%)
Query: 255 AEVIACARRDTTLETAVNVKAY-KRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYI 313
A A A + T+ T K K LK A K EK+ E E K + +
Sbjct: 39 AAAAATAATEATVATEKGEKKKEKNVSPFQLKLAVKASKSEKEMDPEYEEKMKADRAKRF 98
Query: 314 TTVLQHCKDFKEY 326
+L+ + F +
Sbjct: 99 EFLLKQTELFAHF 111
>CGD|CAL0000801 [details] [associations]
symbol:orf19.1720 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 669 (240.6 bits), Expect = 3.9e-109, Sum P(3) = 3.9e-109
Identities = 132/279 (47%), Positives = 185/279 (66%)
Query: 547 EQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVN 606
+Q ++ G+LK+YQ+ GLEW+++LF N LNGILADEMGLGKT+Q I+ +++L+E +N
Sbjct: 165 KQPKLITGGQLKDYQMDGLEWLITLFQNGLNGILADEMGLGKTLQCISFLSHLIENG-IN 223
Query: 607 GPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYV 666
GPFL++VP+STLSNW E ++AP + V Y G+ R + + N++LT+YE
Sbjct: 224 GPFLVVVPVSTLSNWYNEIRKFAPKIKVTKYIGTKQERNDIDLLQQQETTNIILTSYEIS 283
Query: 667 IKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWA 726
I+D L K++WKY+I+DEGHR+KN C L IL V+ +RLLLTGTPLQN L ELW+
Sbjct: 284 IRDFNKLVKINWKYLIVDEGHRLKNSQCLLIKILKKLNVS-NRLLLTGTPLQNNLNELWS 342
Query: 727 LLNFLLPSIFKSVSTFEQWFNAPFAT--TGEKVELNEEE-----TIL-------IIRRLH 772
LLNF+LP IF + F+QWFN T GE N EE ++ +I+ LH
Sbjct: 343 LLNFILPDIFHDLELFQQWFNFDELTELAGELEGTNNEEDEETKNLIKLNIQETLIKNLH 402
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLY 811
+L+PF+LRRLK++V LP K EY++ M+ LQK +Y
Sbjct: 403 TILKPFMLRRLKRDVIKNLPPKKEYLLHIPMTKLQKKIY 441
Score = 409 (149.0 bits), Expect = 3.9e-109, Sum P(3) = 3.9e-109
Identities = 100/291 (34%), Positives = 165/291 (56%)
Query: 842 IVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRV 901
++QLR +CN PF++ N I+ ++ R S KF++L+++LP L S+GH+V
Sbjct: 582 MIQLRNICNSPFIYYNYP-----------ILDQAEVIRNSAKFQVLNQLLPPLLSSGHKV 630
Query: 902 LLFCQMTQLMNILEDYFSYRGF---KYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLST 958
L+F Q T+++++LED+ K RLDG+T + R + + +FN + ++ +F+ ST
Sbjct: 631 LIFAQFTKVLDLLEDWLEESPLSHGKICRLDGSTNHQIRDEQISQFNN-NPKFKVFLSST 689
Query: 959 RAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILA 1018
RAGGLG+NL ADTVI+ D+DWNP DLQA DR HRIGQ N V++ R + +S+EE +++
Sbjct: 690 RAGGLGINLVAADTVILMDNDWNPQMDLQAIDRVHRIGQINPVKIFRFVIKDSIEEVLIS 749
Query: 1019 AARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLAR 1078
+ K ++ VIQ G F K + + T E+ A+ +D ++N M+
Sbjct: 750 RSGSKRFLERLVIQMGQF--KFSNFNKKLTAATT-------SNEQGAIKNDWSINDMMEL 800
Query: 1079 SEEEFQTYQRIDAERRK-EQGKKSRLI--EVSELPDWLIKEDEEIEQWAFE 1126
S+ F++ Q + E+ +K L E+ EL D ++ I+ F+
Sbjct: 801 SKIHFKSTQNGQTSQDSAEEDEKILLSDQEIDELLDRSVECYNSIDDSKFD 851
Score = 57 (25.1 bits), Expect = 3.9e-109, Sum P(3) = 3.9e-109
Identities = 27/146 (18%), Positives = 70/146 (47%)
Query: 179 ISSQIKQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAE 238
+S K ++L + + + II +N + ++ER+ E+ N + + +P K E
Sbjct: 51 LSKDKKMNRLNKLIEKSQIYSQIIA---DNILQTSLERKEEQNNVAPPAPVPAKSDSKNE 107
Query: 239 IELRALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKL--EKQ 296
+ + +K + + +++ A ++D + N+ ++ R+ +++++ + K+ KQ
Sbjct: 108 SDTQPIKKRR-KTKPKSKSTANGKQDIVSMLSTNISDSTKSTREAIEKSQNSSKITNNKQ 166
Query: 297 QKV--EAERKKRQKHQ-EYITTVLQH 319
K+ + K Q E++ T+ Q+
Sbjct: 167 PKLITGGQLKDYQMDGLEWLITLFQN 192
Score = 46 (21.3 bits), Expect = 5.2e-71, Sum P(3) = 5.2e-71
Identities = 17/45 (37%), Positives = 20/45 (44%)
Query: 886 LLDRILPK-LKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLD 929
L+D I LK H L +M QL NI F Y + Y LD
Sbjct: 560 LIDAIYQDILKEAKHLKLQNLKMIQLRNICNSPFIY--YNYPILD 602
Score = 42 (19.8 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 13/49 (26%), Positives = 20/49 (40%)
Query: 53 NLTALQRAIDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQQLR 101
N L ++ EED + LI++ T IK+ T + LR
Sbjct: 363 NFDELTELAGELEGTNNEEDEETKNLIKLNIQETLIKNLHTILKPFMLR 411
>UNIPROTKB|Q5AJ72 [details] [associations]
symbol:CaO19.1720 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 669 (240.6 bits), Expect = 3.9e-109, Sum P(3) = 3.9e-109
Identities = 132/279 (47%), Positives = 185/279 (66%)
Query: 547 EQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVN 606
+Q ++ G+LK+YQ+ GLEW+++LF N LNGILADEMGLGKT+Q I+ +++L+E +N
Sbjct: 165 KQPKLITGGQLKDYQMDGLEWLITLFQNGLNGILADEMGLGKTLQCISFLSHLIENG-IN 223
Query: 607 GPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYV 666
GPFL++VP+STLSNW E ++AP + V Y G+ R + + N++LT+YE
Sbjct: 224 GPFLVVVPVSTLSNWYNEIRKFAPKIKVTKYIGTKQERNDIDLLQQQETTNIILTSYEIS 283
Query: 667 IKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWA 726
I+D L K++WKY+I+DEGHR+KN C L IL V+ +RLLLTGTPLQN L ELW+
Sbjct: 284 IRDFNKLVKINWKYLIVDEGHRLKNSQCLLIKILKKLNVS-NRLLLTGTPLQNNLNELWS 342
Query: 727 LLNFLLPSIFKSVSTFEQWFNAPFAT--TGEKVELNEEE-----TIL-------IIRRLH 772
LLNF+LP IF + F+QWFN T GE N EE ++ +I+ LH
Sbjct: 343 LLNFILPDIFHDLELFQQWFNFDELTELAGELEGTNNEEDEETKNLIKLNIQETLIKNLH 402
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLY 811
+L+PF+LRRLK++V LP K EY++ M+ LQK +Y
Sbjct: 403 TILKPFMLRRLKRDVIKNLPPKKEYLLHIPMTKLQKKIY 441
Score = 409 (149.0 bits), Expect = 3.9e-109, Sum P(3) = 3.9e-109
Identities = 100/291 (34%), Positives = 165/291 (56%)
Query: 842 IVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRV 901
++QLR +CN PF++ N I+ ++ R S KF++L+++LP L S+GH+V
Sbjct: 582 MIQLRNICNSPFIYYNYP-----------ILDQAEVIRNSAKFQVLNQLLPPLLSSGHKV 630
Query: 902 LLFCQMTQLMNILEDYFSYRGF---KYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLST 958
L+F Q T+++++LED+ K RLDG+T + R + + +FN + ++ +F+ ST
Sbjct: 631 LIFAQFTKVLDLLEDWLEESPLSHGKICRLDGSTNHQIRDEQISQFNN-NPKFKVFLSST 689
Query: 959 RAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILA 1018
RAGGLG+NL ADTVI+ D+DWNP DLQA DR HRIGQ N V++ R + +S+EE +++
Sbjct: 690 RAGGLGINLVAADTVILMDNDWNPQMDLQAIDRVHRIGQINPVKIFRFVIKDSIEEVLIS 749
Query: 1019 AARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLAR 1078
+ K ++ VIQ G F K + + T E+ A+ +D ++N M+
Sbjct: 750 RSGSKRFLERLVIQMGQF--KFSNFNKKLTAATT-------SNEQGAIKNDWSINDMMEL 800
Query: 1079 SEEEFQTYQRIDAERRK-EQGKKSRLI--EVSELPDWLIKEDEEIEQWAFE 1126
S+ F++ Q + E+ +K L E+ EL D ++ I+ F+
Sbjct: 801 SKIHFKSTQNGQTSQDSAEEDEKILLSDQEIDELLDRSVECYNSIDDSKFD 851
Score = 57 (25.1 bits), Expect = 3.9e-109, Sum P(3) = 3.9e-109
Identities = 27/146 (18%), Positives = 70/146 (47%)
Query: 179 ISSQIKQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAE 238
+S K ++L + + + II +N + ++ER+ E+ N + + +P K E
Sbjct: 51 LSKDKKMNRLNKLIEKSQIYSQIIA---DNILQTSLERKEEQNNVAPPAPVPAKSDSKNE 107
Query: 239 IELRALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKL--EKQ 296
+ + +K + + +++ A ++D + N+ ++ R+ +++++ + K+ KQ
Sbjct: 108 SDTQPIKKRR-KTKPKSKSTANGKQDIVSMLSTNISDSTKSTREAIEKSQNSSKITNNKQ 166
Query: 297 QKV--EAERKKRQKHQ-EYITTVLQH 319
K+ + K Q E++ T+ Q+
Sbjct: 167 PKLITGGQLKDYQMDGLEWLITLFQN 192
Score = 46 (21.3 bits), Expect = 5.2e-71, Sum P(3) = 5.2e-71
Identities = 17/45 (37%), Positives = 20/45 (44%)
Query: 886 LLDRILPK-LKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLD 929
L+D I LK H L +M QL NI F Y + Y LD
Sbjct: 560 LIDAIYQDILKEAKHLKLQNLKMIQLRNICNSPFIY--YNYPILD 602
Score = 42 (19.8 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 13/49 (26%), Positives = 20/49 (40%)
Query: 53 NLTALQRAIDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQQLR 101
N L ++ EED + LI++ T IK+ T + LR
Sbjct: 363 NFDELTELAGELEGTNNEEDEETKNLIKLNIQETLIKNLHTILKPFMLR 411
>UNIPROTKB|E1BS47 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02022009 EMBL:AADN02022010
IPI:IPI00598234 Ensembl:ENSGALT00000005903 ArrayExpress:E1BS47
Uniprot:E1BS47
Length = 1326
Score = 999 (356.7 bits), Expect = 9.5e-109, Sum P(4) = 9.5e-109
Identities = 241/642 (37%), Positives = 362/642 (56%)
Query: 554 NGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIV 613
N KL+EYQ++G+ W++ + N N ILADEMGLGKTIQ+I + Y + K ++GPFL+I
Sbjct: 151 NNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIA 209
Query: 614 PLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQ-----------MKAS-KFNVLLT 661
PLST+ NW EF W +NVV Y GS R+T+Q +K S KF+ ++T
Sbjct: 210 PLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 268
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
T+E ++ D L + W+ ++IDE HR+KN +CKL L + H++LLTGTPLQN +
Sbjct: 269 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLE-HKVLLTGTPLQNTV 327
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 781
EL++LL+FL P F S +TF Q F +L EE + ++L +L+P +LR
Sbjct: 328 EELFSLLHFLEPGRFPSETTFMQEFG----------DLKTEEQV---QKLQAILKPMMLR 374
Query: 782 RLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMN 840
RLK++VE L K E II+ +++ +QK YR + K L+ G L+N
Sbjct: 375 RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGG-----GQANVPNLLN 429
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPD-----LYRVSGKFELLDRILPKLK 895
T+++LRK CNHP++ EEK + + PD + + +GK L+D++LPKLK
Sbjct: 430 TMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLK 489
Query: 896 STGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
+ GHRVL+F QM + ++ILEDY R + Y R+DG + R + +F+ PDS+ F+F+
Sbjct: 490 AGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFL 549
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V++ RL+T NS E
Sbjct: 550 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYERE 609
Query: 1016 ILAAARYKLNMDEKVIQAGMFDQKSTGSERH---QFLQTILHQD------DEEDEEENAV 1066
+ A KL +D+ V+Q+ + +T + + ++ +L + DEEDE
Sbjct: 610 MFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFC 669
Query: 1067 PDDETVNQMLARSEEEFQTYQRIDAERRKEQGKK---SRLIEVSELPDWLIKEDEEIEQW 1123
+D ++Q+L R I++E + K + + D + + ++W
Sbjct: 670 EED--IDQILLRRTHTIT----IESEGKGSTFAKVCIASFVASGNRTDISLDDPNFWQKW 723
Query: 1124 AFEAKEEEKALHMGRGS------RQRKQVDYTDSLTEKEWLK 1159
A +A+ + AL+ GR + R RKQ ++ E E ++
Sbjct: 724 AKKAELDIDALN-GRNNLVIDTPRVRKQTRLYSAVKEDELME 764
Score = 41 (19.5 bits), Expect = 9.5e-109, Sum P(4) = 9.5e-109
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 1114 IKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQ 1145
+KEDE +E E+ EEK R + + Q
Sbjct: 757 VKEDELMEFSDLESDSEEKPSTKPRRPQDKSQ 788
Score = 40 (19.1 bits), Expect = 9.5e-109, Sum P(4) = 9.5e-109
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 281 RQGLKEARATEKLEK--QQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRL 337
+Q + +A+ E+ EK ++ E ER +R ++ + + +EY NN+ R +L
Sbjct: 107 KQDIDQAKI-EEFEKLMSREPEMERVERPPADDW-----KKSESSREYKNNNKLREYQL 159
Score = 39 (18.8 bits), Expect = 9.5e-109, Sum P(4) = 9.5e-109
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 1273 IEDGKYSSVDELQKDFKTLCRNAQIY 1298
+ G+Y ++D +T+CR +Y
Sbjct: 814 LSHGRYKR-QLTEQDVETICRTILVY 838
>POMBASE|SPAC3G6.01 [details] [associations]
symbol:hrp3 "ATP-dependent DNA helicase Hrp3"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000790 "nuclear
chromatin" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISM] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] [GO:0030702 "chromatin silencing
at centromere" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
PomBase:SPAC3G6.01 Pfam:PF00385 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0000790 GO:GO:0000070
GO:GO:0004003 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
OrthoDB:EOG4TF3TB GO:GO:0060303 PIR:T38720 RefSeq:NP_594967.1
ProteinModelPortal:O14139 MINT:MINT-4670837 STRING:O14139
EnsemblFungi:SPAC3G6.01.1 GeneID:2543064 KEGG:spo:SPAC3G6.01
OMA:HINGSST NextBio:20804092 Uniprot:O14139
Length = 1388
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 251/646 (38%), Positives = 376/646 (58%)
Query: 533 TYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQT 592
T Y + + + +Q S + G+L+++Q+ G+ WM L++ N NGILADEMGLGKT+QT
Sbjct: 351 TNYGNSRPKYRKLEQQPSYITGGELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQT 410
Query: 593 IALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQ-- 650
+A ++YL + +GPFL++VPLST+ W WA +N ++Y G+ R+ ++
Sbjct: 411 VAFLSYLAHSLRQHGPFLVVVPLSTVPAWQETLALWASDMNCISYLGNTTSRQVIRDYEF 470
Query: 651 ----MKASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVA 706
+ KFN+LLTTYEYV+KD+ L+ + W+YM IDE HR+KN L L+ F +
Sbjct: 471 YVDGTQKIKFNLLLTTYEYVLKDRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQFKNS 530
Query: 707 PHRLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETIL 766
+RLL+TGTPLQN + EL AL++FL+P F+ + N +E +EE
Sbjct: 531 -NRLLITGTPLQNNIRELAALVDFLMPGKFE----IREEIN---------LEAPDEEQEA 576
Query: 767 IIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
IR L + L+P++LRRLKK+VE LP K E I++ ++S LQ Y+++ T+ + S
Sbjct: 577 YIRSLQEHLQPYILRRLKKDVEKSLPSKSERILRVELSDLQMYWYKNILTRNYRVLTQS- 635
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSG----IVSGPDLYRVSG 882
L+N +V+L+K NHP++F +EE + + G ++ G L SG
Sbjct: 636 ---ISSGSQISLLNIVVELKKASNHPYLFDGVEESWMQKINSQGRRDEVLKG--LIMNSG 690
Query: 883 KFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLK 942
K LLD++L +L+ GHRVL+F QM ++++IL DY S RG+ + RLDGT A R +
Sbjct: 691 KMVLLDKLLSRLRRDGHRVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSID 750
Query: 943 KFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVR 1002
FNAP+S F+F+LSTRAGGLG+NL TADTVIIFDSDWNP DLQA RAHRIGQKN V
Sbjct: 751 HFNAPNSPDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVM 810
Query: 1003 VLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFD-QKSTGSERH--QFLQTILH--QDD 1057
V RL++ +++EE +L AR K+ ++ +I G+ D QK++ +++ + L IL +
Sbjct: 811 VYRLLSKDTIEEDVLERARRKMILEYAIISLGVTDKQKNSKNDKFSAEELSAILKFGASN 870
Query: 1058 EEDEEENAVP-DDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELP---DW- 1112
E N +D ++++L +E+ + A E+ K EV++ W
Sbjct: 871 MFKAENNQKKLEDMNLDEILEHAEDHDTSNDVGGASMGGEEFLKQ--FEVTDYKADVSWD 928
Query: 1113 -LIK--EDEEIEQWAFEAKEEEKALHMG-RGSRQRKQVDYTDSLTE 1154
+I E E+ E+ +EEE+AL S +R Y S E
Sbjct: 929 DIIPLTEREKFEE-EDRLREEEEALKQEIELSSRRGNRPYPSSAVE 973
>UNIPROTKB|F1PWD8 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 OMA:TFGVIFD EMBL:AAEX03015818
EMBL:AAEX03015819 EMBL:AAEX03015820 Ensembl:ENSCAFT00000011497
GeneTree:ENSGT00700000105087 Uniprot:F1PWD8
Length = 2994
Score = 1016 (362.7 bits), Expect = 1.8e-106, Sum P(5) = 1.8e-106
Identities = 242/639 (37%), Positives = 364/639 (56%)
Query: 554 NGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIV 613
N KL+EYQ++G+ W++ + N N ILADEMGLGKTIQ+I + Y + K ++GPFL+I
Sbjct: 964 NNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIA 1022
Query: 614 PLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQ-----------MKAS-KFNVLLT 661
PLST+ NW EF W +NVV Y GS R+T+Q+ +K S KF+ ++T
Sbjct: 1023 PLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQSYEMYFKDPQGRVIKGSYKFHAIIT 1081
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
T+E ++ D L + W+ ++IDE HR+KN +CKL L + H++LLTGTPLQN +
Sbjct: 1082 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLE-HKVLLTGTPLQNTV 1140
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 781
EL++LL+FL PS F S +TF Q F +L EE + ++L +L+P +LR
Sbjct: 1141 EELFSLLHFLEPSRFPSETTFMQEFG----------DLKTEEQV---QKLQAILKPMMLR 1187
Query: 782 RLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMN 840
RLK++VE L K E II+ +++ +QK YR + K L+ G L+N
Sbjct: 1188 RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGG-----GQANVPNLLN 1242
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPD-----LYRVSGKFELLDRILPKLK 895
T+++LRK CNHP++ EEK + + PD + + +GK L+D++LPKLK
Sbjct: 1243 TMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLK 1302
Query: 896 STGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
+ GHRVL+F QM + ++ILEDY R + Y R+DG + R + +F+ PDS+ F+F+
Sbjct: 1303 AGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1362
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V++ RL+T NS E
Sbjct: 1363 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYERE 1422
Query: 1016 ILAAARYKLNMDEKVIQAGMFDQKSTGSERH---QFLQTILHQD------DEEDEEENAV 1066
+ A KL +D+ V+Q+ + +T + + ++ +L + DEEDE
Sbjct: 1423 MFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFC 1482
Query: 1067 PDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFE 1126
+D ++Q+L R I++E + K+ + D + + ++WA +
Sbjct: 1483 EED--IDQILLRRTHTIT----IESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKK 1536
Query: 1127 AKEEEKALHMGRGS------RQRKQVDYTDSLTEKEWLK 1159
A+ + AL+ GR + R RKQ ++ E E ++
Sbjct: 1537 AELDIDALN-GRNNLVIDTPRVRKQTRLYSAVKEDELME 1574
Score = 45 (20.9 bits), Expect = 1.8e-106, Sum P(5) = 1.8e-106
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 1114 IKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQ 1145
+KEDE +E E+ EEK R + R Q
Sbjct: 1567 VKEDELMEFSDLESDSEEKPCTKPRRPQDRSQ 1598
Score = 44 (20.5 bits), Expect = 1.8e-106, Sum P(5) = 1.8e-106
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 281 RQGLKEARATEKLEK--QQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRL 337
RQ + +A+ E+ EK ++ E ER +R ++ + + +EY NN+ R +L
Sbjct: 920 RQDIDQAKI-EEFEKLMSREPETERVERPPADDW-----KKSESSREYKNNNKLREYQL 972
Score = 40 (19.1 bits), Expect = 1.8e-106, Sum P(5) = 1.8e-106
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 118 PQLAMGVQGKRMEGVPSGPQMPPMSLHG 145
PQ + + VP PP +LHG
Sbjct: 238 PQQSPSMAPSLRHSVPQFHHHPPTALHG 265
Score = 39 (18.8 bits), Expect = 1.8e-106, Sum P(5) = 1.8e-106
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 1273 IEDGKYSSVDELQKDFKTLCRNAQIY 1298
+ G+Y ++D +T+CR +Y
Sbjct: 1624 LSHGRYKR-QLTEQDVETICRTILVY 1648
>UNIPROTKB|F6XTU7 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AAEX03026896
Ensembl:ENSCAFT00000029649 Uniprot:F6XTU7
Length = 1075
Score = 976 (348.6 bits), Expect = 4.0e-106, Sum P(4) = 4.0e-106
Identities = 234/609 (38%), Positives = 341/609 (55%)
Query: 550 SILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPF 609
S + G L++YQI+GL W++SL+ N +NGILADEMGLGKT+QTIAL+ YL + + GP
Sbjct: 176 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 235
Query: 610 LIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEYVIK 668
+++VP STL NW EF+RW PS+ V+ + G R ++ +M +++V +T+YE VIK
Sbjct: 236 MVLVPKSTLYNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIK 295
Query: 669 DKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALL 728
+K K HW+Y++IDE HR+KN KL+ I+ F + +RLLLTGTPLQN L ELWALL
Sbjct: 296 EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFK-STNRLLLTGTPLQNNLHELWALL 354
Query: 729 NFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVE 788
NFLLP +F S F+ WF+ K L +++ ++ RLH VL+PFLLRR+K +VE
Sbjct: 355 NFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAVLKPFLLRRIKTDVE 404
Query: 789 SQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLR-- 846
LP K E IK + GL K+ +++ S ++N I+ LR
Sbjct: 405 KSLPPKKE--IKVYL-GLSKMQREWFVILAFFISENSNNSNKNHKLD--ILNVIMLLREA 459
Query: 847 KLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLFCQ 906
K C F Q ++ + ++ I Y G +LD +++ HR C
Sbjct: 460 KCCGASFCLQKKKQNVA-YINKVHIN-----YCSKGIISMLDYCKTEIEQ--HRCRCLCI 511
Query: 907 MTQLMNILEDYF-----SYRGFKYMRLDGTTKAED-----------RGDLLKKFNAPDSE 950
+ L E+ F ++ + ++ D ED + + ++ FNAP+S
Sbjct: 512 LNPLNTFFENGFLQIHIKHKPYSAIQNDPFPWNEDDTKYLFVYIIYKKEAIEAFNAPNSS 571
Query: 951 YFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVN 1010
FIF+LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK VRV RL+T N
Sbjct: 572 KFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDN 631
Query: 1011 SVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDD 1069
+VEERI+ A KL +D VIQ G + DQ+S + + LQ I H + + D
Sbjct: 632 TVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFASKESELTD 691
Query: 1070 ETVNQMLARSEEEF-QTYQRI----DAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWA 1124
E + +L R E++ + +R+ ++ R + + + E D+ K+ + +W
Sbjct: 692 EDITTLLERGEKKTAEMNERLQKMGESSLRNFRMDTEQSLYKFEGEDYREKQKLGMVEWI 751
Query: 1125 FEAKEEEKA 1133
K E KA
Sbjct: 752 EPPKRERKA 760
Score = 44 (20.5 bits), Expect = 1.0e-103, Sum P(3) = 1.0e-103
Identities = 18/74 (24%), Positives = 28/74 (37%)
Query: 254 RAEVIACARRDTTLETAVNVKAY-KRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEY 312
+ E A A + T+ T K K LK A K EK+ E E K + +
Sbjct: 35 KEEGAAAAATEATVATEKGEKKKEKNVSSFQLKLAAKASKSEKEMDPEYEEKMKADRAKR 94
Query: 313 ITTVLQHCKDFKEY 326
+L+ + F +
Sbjct: 95 FEFLLKQTELFAHF 108
Score = 41 (19.5 bits), Expect = 4.0e-106, Sum P(4) = 4.0e-106
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E + DI+KI+ +IE G+
Sbjct: 907 FWERCNELQDIEKIMAQIERGE 928
Score = 40 (19.1 bits), Expect = 4.0e-106, Sum P(4) = 4.0e-106
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 371 DEEGYRKLIDQKKDKRLAFLLSQTD 395
D E Y + + + KR FLL QT+
Sbjct: 80 DPE-YEEKMKADRAKRFEFLLKQTE 103
Score = 37 (18.1 bits), Expect = 4.0e-106, Sum P(4) = 4.0e-106
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 255 AEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKK 305
A +A A T+ + + T ++ A ATE +K E +++K
Sbjct: 9 AATVAAANATATIVVIEDEQPGPSTSKEEGAAAAATEATVATEKGEKKKEK 59
>ZFIN|ZDB-GENE-030131-9923 [details] [associations]
symbol:hells "helicase, lymphoid-specific"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR011515 Pfam:PF00176 Pfam:PF00271
Pfam:PF07557 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-9923 GO:GO:0005524 GO:GO:0005634 GO:GO:0000775
GO:GO:0003677 GO:GO:0004386 GO:GO:0045132 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 CTD:3070 HOVERGEN:HBG060049
EMBL:AY612850 IPI:IPI00817585 RefSeq:NP_001032178.1
UniGene:Dr.75180 ProteinModelPortal:Q3BDS6 STRING:Q3BDS6
GeneID:553328 KEGG:dre:553328 InParanoid:Q3BDS6 NextBio:20880094
ArrayExpress:Q3BDS6 Uniprot:Q3BDS6
Length = 853
Score = 611 (220.1 bits), Expect = 9.1e-106, Sum P(3) = 9.1e-106
Identities = 125/289 (43%), Positives = 179/289 (61%)
Query: 544 IVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKK 603
+ +Q + G ++ YQ++G+EW+ L+ N +NGILADEMGLGKTIQ IA I ++EKK
Sbjct: 220 VPAQQPQLFTGGVMRWYQVEGIEWLRMLWENGINGILADEMGLGKTIQCIAHIAMMVEKK 279
Query: 604 KVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPH-----LRKTLQAQMKASKFNV 658
V GPFL++ PLSTL NW EF+R+ P V+V+ Y G ++K Q Q V
Sbjct: 280 -VLGPFLVVAPLSTLPNWISEFKRFTPEVSVLLYHGPQKERLDLVKKIRQHQGSLRMCPV 338
Query: 659 LLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQ 718
++T++E ++D+ L + HW Y+I+DEGHR+KN +C+L L ++LLLTGTPLQ
Sbjct: 339 VVTSFEIAMRDRKFLQRFHWNYLIVDEGHRIKNLNCRLVQELKML-PTDNKLLLTGTPLQ 397
Query: 719 NKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATT-GEKVELNEEETILIIRRLHKVLRP 777
N L ELW+LLNFLLP +F + +FE WF+ T+ E + NE E I+ LH +L P
Sbjct: 398 NNLSELWSLLNFLLPDVFDDLKSFESWFDISTITSDAENIVANEREQN-ILHMLHLILTP 456
Query: 778 FLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
FLLRRLK +V ++P K E ++ ++ Q+ Y + K I G E
Sbjct: 457 FLLRRLKSDVTLEVPPKKEIVVYAPLTNKQEAFYMAIVNKTIAKLLGQE 505
Score = 485 (175.8 bits), Expect = 9.1e-106, Sum P(3) = 9.1e-106
Identities = 103/210 (49%), Positives = 138/210 (65%)
Query: 838 LMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKST 897
L N ++ L++ CNH ++ IE G I L SGKF +LDR+LP+LK
Sbjct: 576 LQNILMLLKRCCNHAYL---IEYPLDPTTGDFKI--DEQLVEASGKFLILDRMLPELKKR 630
Query: 898 GHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLS 957
GH+VL+F QMT +++IL DY RG++Y RLDG+ DR + +KKF++ D E F+F+LS
Sbjct: 631 GHKVLIFSQMTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSS-DPEVFLFLLS 689
Query: 958 TRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERIL 1017
TRAGGLG+NL +ADTVIIFDSDWNP DLQAQDR HRIGQ V V RL+T N+++E+IL
Sbjct: 690 TRAGGLGINLTSADTVIIFDSDWNPQADLQAQDRCHRIGQTKPVVVHRLITANTIDEKIL 749
Query: 1018 AAARYKLNMDEKVIQAGMFDQKSTGSERHQ 1047
A K +++ VI F K + +E Q
Sbjct: 750 ERASAKRKLEKMVIHKNKF--KGSKAELKQ 777
Score = 51 (23.0 bits), Expect = 1.2e-43, Sum P(3) = 1.2e-43
Identities = 21/82 (25%), Positives = 35/82 (42%)
Query: 596 ITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKAS- 654
+ +L+EK + FL+ L+ ER V+ KGS +KT++ + K
Sbjct: 87 LQHLLEKSNIYSKFLLTKMEQQQQEEKLKKERLEKKAAVLKQKGSD--KKTVKVERKKRG 144
Query: 655 ----KFNVLLTTYEYVIKDKGP 672
K ++T E + K K P
Sbjct: 145 REDYKIADVMTKEEIMSKAKKP 166
Score = 50 (22.7 bits), Expect = 9.1e-106, Sum P(3) = 9.1e-106
Identities = 26/120 (21%), Positives = 47/120 (39%)
Query: 198 DPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLRAEV 257
+ ++I +E E E+ +EE + E R + + ++ Q L
Sbjct: 41 EEMVITKEMEEE-----EKNLEEEGEKKEREMMEEARQSRGNDSQEMRFKRLQHLLEKSN 95
Query: 258 IACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVL 317
I T +E + K+ +R K A +K ++ V+ ERKKR + I V+
Sbjct: 96 IYSKFLLTKMEQQQQEEKLKK-ERLEKKAAVLKQKGSDKKTVKVERKKRGREDYKIADVM 154
Score = 49 (22.3 bits), Expect = 1.2e-105, Sum P(3) = 1.2e-105
Identities = 10/43 (23%), Positives = 23/43 (53%)
Query: 269 TAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQE 311
T + +++K + + + E+ EK + E E+K+R+ +E
Sbjct: 28 TTIEETTMEKSKHEEMVITKEMEEEEKNLEEEGEKKEREMMEE 70
Score = 39 (18.8 bits), Expect = 1.3e-104, Sum P(3) = 1.3e-104
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 291 EKLEKQQKVEAERKKRQKHQEYITTVLQH 319
EK E++ EA + + QE LQH
Sbjct: 61 EKKEREMMEEARQSRGNDSQEMRFKRLQH 89
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 1015 (362.4 bits), Expect = 1.1e-105, Sum P(2) = 1.1e-105
Identities = 220/543 (40%), Positives = 327/543 (60%)
Query: 556 KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVPL 615
KL +QI+G+ W+ + + ILADEMGLGKTIQT+ + L ++ GPFLI VPL
Sbjct: 266 KLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLISVPL 325
Query: 616 STLSNWSLEFERWAPSVNVVAYKGSPHLR---------------KTLQAQMKASKFNVLL 660
STL+NW E E WAP + V Y G R KT++ KFNV+L
Sbjct: 326 STLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKTMRENQTQYKFNVML 385
Query: 661 TTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNK 720
T+YE++ D L + W +++DE HR++++ K IL+ + + ++LLLTGTPLQN
Sbjct: 386 TSYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIG-YKLLLTGTPLQNN 444
Query: 721 LPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLL 780
L EL+ LLNFL F + TF+ F ++++EE + +RLH++L P +L
Sbjct: 445 LEELFHLLNFLSSGKFNDLQTFQAEFT----------DVSKEEQV---KRLHEILEPHML 491
Query: 781 RRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMN 840
RRLK +V +P K E+I++ ++S +QK Y+H+ TK + L+N
Sbjct: 492 RRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHILTKNFKALNQK-----GGGRVCSLLN 546
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHR 900
++ LRK CNHP++F + E+ + + SG+ L + SGK +LL ++L +LK+ HR
Sbjct: 547 IMMDLRKCCNHPYLFPSAAEEAT--ISPSGLYEMSSLTKASGKLDLLSKMLKQLKADNHR 604
Query: 901 VLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRA 960
VLLF QMT+++N+LE + G++Y R+DG+ K + R + +FN P SE+F+F+LSTRA
Sbjct: 605 VLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFNDPVSEHFVFLLSTRA 664
Query: 961 GGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAA 1020
GGLG+NL TADTVIIFDSDWNPH D+QA RAHR+GQK +V + R +T NSVEERI+ A
Sbjct: 665 GGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEERIMQVA 724
Query: 1021 RYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE---DEEENAVP-DDETVNQML 1076
++K+ + V++ GM + S+ L+ IL E+ D + A+ DD+ V +L
Sbjct: 725 KHKMMLTHLVVRPGMGGMTTNFSKDE--LEDILRFGTEDLFKDGKSEAIHYDDKAVADLL 782
Query: 1077 ARS 1079
R+
Sbjct: 783 DRT 785
Score = 51 (23.0 bits), Expect = 1.1e-105, Sum P(2) = 1.1e-105
Identities = 8/15 (53%), Positives = 13/15 (86%)
Query: 1136 MGRGSRQRKQVDYTD 1150
MG+G R RK++DY++
Sbjct: 862 MGKGKRIRKEIDYSN 876
Score = 41 (19.5 bits), Expect = 1.2e-104, Sum P(2) = 1.2e-104
Identities = 18/76 (23%), Positives = 28/76 (36%)
Query: 1079 SEEEFQTYQRIDAERRKEQGKKSRLI----EVSELPDWLIKEDEEIEQWAFEAKEEEKAL 1134
S++E + R E + GK + V++L D + EE E WA E K
Sbjct: 747 SKDELEDILRFGTEDLFKDGKSEAIHYDDKAVADLLDRTNRGIEEKESWANEYLSSFKVA 806
Query: 1135 HMGRGSRQRKQVDYTD 1150
+ DY +
Sbjct: 807 SYATKEDHEEHDDYNN 822
>ZFIN|ZDB-GENE-041014-72 [details] [associations]
symbol:ino80 "INO80 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
ZFIN:ZDB-GENE-041014-72 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX897725
HOGENOM:HOG000231795 HOVERGEN:HBG057875 OMA:KVIRKFW IPI:IPI00516098
UniGene:Dr.84310 ProteinModelPortal:Q5RGG8 STRING:Q5RGG8
InParanoid:Q5RGG8 Uniprot:Q5RGG8
Length = 1582
Score = 679 (244.1 bits), Expect = 1.0e-104, Sum P(3) = 1.0e-104
Identities = 140/357 (39%), Positives = 215/357 (60%)
Query: 552 LVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLI 611
+ NGKLK YQ+KG+ W+ +L+ +NGILADEMGLGKT+Q+IAL+ +L E++ + GPFLI
Sbjct: 514 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLI 573
Query: 612 IVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA--QMKA-----SKFNVLLTTYE 664
I P STL+NW EF R+ P V+ Y G+PH RK ++ K + F+V++T+Y+
Sbjct: 574 ISPASTLNNWHQEFSRFVPKFKVLPYWGNPHDRKVIRKFWSQKTLYTQNAPFHVVITSYQ 633
Query: 665 YVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPEL 724
V++D ++ W+YM++DE +K+ IL F +RLLLTGTP+QN + EL
Sbjct: 634 LVVQDVKYFQRVKWQYMVLDEAQALKSSTSVRWKILLQFQCR-NRLLLTGTPIQNTMAEL 692
Query: 725 WALLNFLLPSIFKSVSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHKVLRPFLLRRL 783
WALL+F++P++F S F +WF+ + E K ++E + + RLH +L+PF+LRR+
Sbjct: 693 WALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHMILKPFMLRRI 748
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK-GI--LLTDGSEXXXXXXXXXXXLMN 840
KK+VE++L DK+E + C ++ Q++LY+ + K I LL LMN
Sbjct: 749 KKDVENELSDKIEILTYCQLTSRQRLLYQALKNKISIEDLLQSSMGSAQQAHSTTSSLMN 808
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKST 897
++Q RK+CNHP +F+ E + H+ + L+R +D KLK T
Sbjct: 809 LVMQFRKVCNHPDLFERQEIRSPFHMSLKPFIMSKFLFR-HAILHTIDHGKTKLKQT 864
Score = 436 (158.5 bits), Expect = 1.0e-104, Sum P(3) = 1.0e-104
Identities = 94/223 (42%), Positives = 141/223 (63%)
Query: 881 SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL 940
SGK LD +L +LKS GHRVL++ QMT+++++LE+Y YR YMRLDG++K +R D+
Sbjct: 1131 SGKLHTLDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1190
Query: 941 LKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 1000
+ F + ++ F+F+LSTRAGGLG+NL ADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1191 VADFQSR-TDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1249
Query: 1001 VRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEED 1060
V V RL+ ++EERIL A+ K + VI G F K + + + +L DDEE
Sbjct: 1250 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNF--KPDTLKPKEVVSLLL--DDEEL 1305
Query: 1061 EEENAVPDDETVN-QMLARSEEEFQTYQRIDAERRKEQGKKSR 1102
E++ + +E + ++ +E + ++ +RKE +S+
Sbjct: 1306 EKKLRLRQEEKRQLEESSKVKERKRKREKYAERKRKEDDPESK 1348
Score = 57 (25.1 bits), Expect = 1.0e-104, Sum P(3) = 1.0e-104
Identities = 21/92 (22%), Positives = 44/92 (47%)
Query: 241 LRALKVLNFQRQLRA-EVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKV 299
+R ++ Q Q E + ARR T E + K Y++ +++ K A E LE Q+K+
Sbjct: 316 MREVRRAAIQAQKNCKETLPRARR-LTKEMLLYWKKYEKVEKEHRKRAEK-EALE-QRKL 372
Query: 300 EAERKKRQKHQEYITTVLQHCKDFKEYHRNNQ 331
+ E ++ ++ Q + ++ + + + Q
Sbjct: 373 DEEMREAKRQQRKLNFLITQTELYAHFMGGKQ 404
Score = 50 (22.7 bits), Expect = 1.8e-103, Sum P(4) = 1.8e-103
Identities = 11/45 (24%), Positives = 27/45 (60%)
Query: 283 GLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHC-KDFKEY 326
GLK+ + E+ + + K++ ++K+++ +E+ QH K F ++
Sbjct: 211 GLKKKKIKEEKKCKAKLKKMKRKKKRGEEFSMEGRQHITKTFAKF 255
Score = 44 (20.5 bits), Expect = 1.4e-63, Sum P(3) = 1.4e-63
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 1113 LIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQ 1145
L+ +DEE+E+ +EE++ L ++RK+
Sbjct: 1298 LLLDDEELEKKLRLRQEEKRQLEESSKVKERKR 1330
Score = 39 (18.8 bits), Expect = 1.8e-103, Sum P(4) = 1.8e-103
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 381 QKKDKRLAFLLSQTDEY 397
+++ ++L FL++QT+ Y
Sbjct: 380 KRQQRKLNFLITQTELY 396
>UNIPROTKB|F1NSG3 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008015 "blood circulation" evidence=IEA] [GO:0021545 "cranial
nerve development" evidence=IEA] [GO:0030217 "T cell
differentiation" evidence=IEA] [GO:0030540 "female genitalia
development" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060041 "retina development
in camera-type eye" evidence=IEA] [GO:0060123 "regulation of growth
hormone secretion" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0040018 GO:GO:0003682
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 IPI:IPI00590082
OMA:TFGVIFD GO:GO:0060123 GeneTree:ENSGT00560000077077
EMBL:AADN02022009 EMBL:AADN02022010 Ensembl:ENSGALT00000024950
ArrayExpress:F1NSG3 Uniprot:F1NSG3
Length = 2248
Score = 1012 (361.3 bits), Expect = 1.7e-104, Sum P(4) = 1.7e-104
Identities = 241/639 (37%), Positives = 362/639 (56%)
Query: 554 NGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIV 613
N KL+EYQ++G+ W++ + N N ILADEMGLGKTIQ+I + Y + K ++GPFL+I
Sbjct: 203 NNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIA 261
Query: 614 PLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQ-----------MKAS-KFNVLLT 661
PLST+ NW EF W +NVV Y GS R+T+Q +K S KF+ ++T
Sbjct: 262 PLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 320
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
T+E ++ D L + W+ ++IDE HR+KN +CKL L + H++LLTGTPLQN +
Sbjct: 321 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLE-HKVLLTGTPLQNTV 379
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 781
EL++LL+FL P F S +TF Q F +L EE + ++L +L+P +LR
Sbjct: 380 EELFSLLHFLEPGRFPSETTFMQEFG----------DLKTEEQV---QKLQAILKPMMLR 426
Query: 782 RLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMN 840
RLK++VE L K E II+ +++ +QK YR + K L+ G L+N
Sbjct: 427 RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGG-----GQANVPNLLN 481
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPD-----LYRVSGKFELLDRILPKLK 895
T+++LRK CNHP++ EEK + + PD + + +GK L+D++LPKLK
Sbjct: 482 TMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLK 541
Query: 896 STGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
+ GHRVL+F QM + ++ILEDY R + Y R+DG + R + +F+ PDS+ F+F+
Sbjct: 542 AGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFL 601
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V++ RL+T NS E
Sbjct: 602 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYERE 661
Query: 1016 ILAAARYKLNMDEKVIQAGMFDQKSTGSERH---QFLQTILHQD------DEEDEEENAV 1066
+ A KL +D+ V+Q+ + +T + + ++ +L + DEEDE
Sbjct: 662 MFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFC 721
Query: 1067 PDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFE 1126
+D ++Q+L R I++E + K+ + D + + ++WA +
Sbjct: 722 EED--IDQILLRRTHTIT----IESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKK 775
Query: 1127 AKEEEKALHMGRGS------RQRKQVDYTDSLTEKEWLK 1159
A+ + AL+ GR + R RKQ ++ E E ++
Sbjct: 776 AELDIDALN-GRNNLVIDTPRVRKQTRLYSAVKEDELME 813
Score = 41 (19.5 bits), Expect = 1.7e-104, Sum P(4) = 1.7e-104
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 1114 IKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQ 1145
+KEDE +E E+ EEK R + + Q
Sbjct: 806 VKEDELMEFSDLESDSEEKPSTKPRRPQDKSQ 837
Score = 40 (19.1 bits), Expect = 1.7e-104, Sum P(4) = 1.7e-104
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 281 RQGLKEARATEKLEK--QQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRL 337
+Q + +A+ E+ EK ++ E ER +R ++ + + +EY NN+ R +L
Sbjct: 159 KQDIDQAKI-EEFEKLMSREPEMERVERPPADDW-----KKSESSREYKNNNKLREYQL 211
Score = 39 (18.8 bits), Expect = 1.7e-104, Sum P(4) = 1.7e-104
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 1273 IEDGKYSSVDELQKDFKTLCRNAQIY 1298
+ G+Y ++D +T+CR +Y
Sbjct: 863 LSHGRYKR-QLTEQDVETICRTILVY 887
>RGD|1310969 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000070 "mitotic sister chromatid
segregation" evidence=ISO] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003678 "DNA helicase activity"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030307 "positive
regulation of cell growth" evidence=ISO] [GO:0031011 "Ino80
complex" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0070914 "UV-damage excision repair" evidence=ISO]
[GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 RGD:1310969
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00680000100052
IPI:IPI00569811 Ensembl:ENSRNOT00000031672 UCSC:RGD:1310969
Uniprot:D4A6Q6
Length = 1553
Score = 680 (244.4 bits), Expect = 2.1e-104, Sum P(4) = 2.1e-104
Identities = 136/322 (42%), Positives = 205/322 (63%)
Query: 552 LVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLI 611
+ NGKLK YQ+KG+ W+ +L+ +NGILADEMGLGKT+Q+IAL+ +L E++ + GPFLI
Sbjct: 515 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLI 574
Query: 612 IVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRK---TLQAQMKASKFNVLLTTYEYVIK 668
I P STL+NW EF R+ P V+ Y G+PH RK TL Q + F+V++T+Y+ V++
Sbjct: 575 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKKKKTLYTQ--DAPFHVVITSYQLVVQ 632
Query: 669 DKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALL 728
D ++ W+YM++DE +K+ IL F +RLLLTGTP+QN + ELWALL
Sbjct: 633 DVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCR-NRLLLTGTPIQNTMAELWALL 691
Query: 729 NFLLPSIFKSVSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHKVLRPFLLRRLKKEV 787
+F++P++F S F +WF+ + E K ++E + + RLH +L+PF+LRR+KK+V
Sbjct: 692 HFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHMILKPFMLRRIKKDV 747
Query: 788 ESQLPDKVEYIIKCDMSGLQKVLYRHMHTK-GI--LLTDGSEXXXXXXXXXXXLMNTIVQ 844
E++L DK+E ++ C ++ QK+LY+ + K I LL LMN ++Q
Sbjct: 748 ENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVMQ 807
Query: 845 LRKLCNHPFMFQNIEEKFSDHV 866
RK+CNHP +F+ E H+
Sbjct: 808 FRKVCNHPELFERQETWSPFHI 829
Score = 434 (157.8 bits), Expect = 2.1e-104, Sum P(4) = 2.1e-104
Identities = 94/217 (43%), Positives = 138/217 (63%)
Query: 881 SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL 940
SGK LD +L +LKS GHRVL++ QMT+++++LE+Y YR YMRLDG++K +R D+
Sbjct: 1097 SGKLYALDILLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1156
Query: 941 LKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 1000
+ F + + F+F+LSTRAGGLG+NL ADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1157 VADFQTRN-DIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1215
Query: 1001 VRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEED 1060
V V RL+ ++EERIL A+ K + VI G F K + + + +L DDEE
Sbjct: 1216 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNF--KPDTLKPKEVVSLLL--DDEEL 1271
Query: 1061 EEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQ 1097
E++ + +E Q + +E + + AE++K++
Sbjct: 1272 EKKLRLRQEEKRQQEESNRVKERKRKREKYAEKKKKE 1308
Score = 59 (25.8 bits), Expect = 2.1e-104, Sum P(4) = 2.1e-104
Identities = 28/120 (23%), Positives = 57/120 (47%)
Query: 203 LQERENRVALNI-ERRIEELNGSLTSTLPEHLRVKAEIELRALKVLN---FQRQLRA-EV 257
L R +V L+I ++ + + N +S L ++ + +K + Q Q E
Sbjct: 275 LNARRRKVWLSIVKKELPKANKQKSSARNLFLTNSRKLAHQCMKEVRRAALQAQKNCKET 334
Query: 258 IACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVL 317
+ ARR T E + K Y++ +++ K A E LE Q+K++ E ++ ++ Q + ++
Sbjct: 335 LPRARR-LTKEMLLYWKKYEKVEKEHRKRAEK-EALE-QRKLDEEMREAKRQQRKLNFLI 391
Score = 42 (19.8 bits), Expect = 1.9e-63, Sum P(4) = 1.9e-63
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 1113 LIKEDEEIEQWAFEAKEEEKALHMGRG---SRQRKQVDYTDSLTEKEWL 1158
L+ +DEE+E+ ++EEK R+RK+ Y + +++ L
Sbjct: 1264 LLLDDEELEK-KLRLRQEEKRQQEESNRVKERKRKREKYAEKKKKEDEL 1311
Score = 41 (19.5 bits), Expect = 1.6e-102, Sum P(4) = 1.6e-102
Identities = 8/30 (26%), Positives = 19/30 (63%)
Query: 283 GLKEARATEKLEKQQKVEAERKKRQKHQEY 312
G K+ + E + + K++ +KKR++ +E+
Sbjct: 208 GPKKKKFKEDKKLKAKLKKVKKKRRRDEEF 237
Score = 40 (19.1 bits), Expect = 3.0e-63, Sum P(4) = 3.0e-63
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 1070 ETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIE 1105
E V+ +L +EE + R+ E +++Q + +R+ E
Sbjct: 1260 EVVSLLL--DDEELEKKLRLRQEEKRQQEESNRVKE 1293
Score = 39 (18.8 bits), Expect = 2.1e-104, Sum P(4) = 2.1e-104
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 381 QKKDKRLAFLLSQTDEY 397
+++ ++L FL++QT+ Y
Sbjct: 381 KRQQRKLNFLITQTELY 397
Score = 37 (18.1 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 761 EEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEY 797
EEE L LH +LR ++L + S+ + +Y
Sbjct: 149 EEELSLSREELHNMLRLHKYKKLHQNKYSKDKELQQY 185
>UNIPROTKB|Q9P2D1 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] [GO:0008015 "blood circulation"
evidence=IEA] [GO:0030540 "female genitalia development"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0003007 "heart morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0043584 "nose development" evidence=IMP] [GO:0048806 "genitalia
development" evidence=IMP] [GO:0060021 "palate development"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0001501 "skeletal system development"
evidence=IMP] [GO:0050890 "cognition" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0021545
"cranial nerve development" evidence=IMP] [GO:0060123 "regulation
of growth hormone secretion" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=TAS] [GO:0030217 "T cell differentiation"
evidence=IMP] [GO:0060173 "limb development" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0060324 "face development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0008015 GO:GO:0003007 GO:GO:0050890
GO:GO:0001701 GO:GO:0040018 GO:GO:0007417 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 GO:GO:0048806 GO:GO:0042472
GO:GO:0001501 GO:GO:0060041 GO:GO:0007605 GO:GO:0007512
GO:GO:0004386 GO:GO:0035116 GO:GO:0060324 GO:GO:0060021
GO:GO:0060173 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150 CTD:55636
KO:K14437 OrthoDB:EOG4MCWZD EMBL:AC023102 EMBL:AC113143
EMBL:AB037837 EMBL:AK000364 EMBL:AK000368 EMBL:BC014681
EMBL:BC051264 EMBL:BC053890 EMBL:BC068000 EMBL:BC080627
EMBL:BC110818 IPI:IPI00472901 IPI:IPI00794880 RefSeq:NP_060250.2
UniGene:Hs.20395 UniGene:Hs.733236 PDB:2CKC PDB:2V0E PDB:2V0F
PDBsum:2CKC PDBsum:2V0E PDBsum:2V0F ProteinModelPortal:Q9P2D1
SMR:Q9P2D1 DIP:DIP-48685N IntAct:Q9P2D1 STRING:Q9P2D1
PhosphoSite:Q9P2D1 DMDM:148877246 PaxDb:Q9P2D1 PRIDE:Q9P2D1
Ensembl:ENST00000307121 Ensembl:ENST00000423902
Ensembl:ENST00000525508 GeneID:55636 KEGG:hsa:55636 UCSC:uc003xue.3
GeneCards:GC08P061642 H-InvDB:HIX0007533 HGNC:HGNC:20626 MIM:214800
MIM:608765 MIM:608892 MIM:612370 neXtProt:NX_Q9P2D1 Orphanet:138
Orphanet:478 Orphanet:432 PharmGKB:PA134948695 InParanoid:Q9P2D1
OMA:TFGVIFD EvolutionaryTrace:Q9P2D1 GenomeRNAi:55636 NextBio:60291
ArrayExpress:Q9P2D1 Bgee:Q9P2D1 CleanEx:HS_CHD7
Genevestigator:Q9P2D1 GermOnline:ENSG00000171316 GO:GO:0021545
GO:GO:0043584 GO:GO:0060123 Uniprot:Q9P2D1
Length = 2997
Score = 1014 (362.0 bits), Expect = 2.2e-104, Sum P(4) = 2.2e-104
Identities = 242/639 (37%), Positives = 363/639 (56%)
Query: 554 NGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIV 613
N KL+EYQ++G+ W++ + N N ILADEMGLGKTIQ+I + Y + K ++GPFL+I
Sbjct: 965 NNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIA 1023
Query: 614 PLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQ-----------MKAS-KFNVLLT 661
PLST+ NW EF W +NVV Y GS R+T+Q +K S KF+ ++T
Sbjct: 1024 PLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 1082
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
T+E ++ D L + W+ ++IDE HR+KN +CKL L + H++LLTGTPLQN +
Sbjct: 1083 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLE-HKVLLTGTPLQNTV 1141
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 781
EL++LL+FL PS F S +TF Q F +L EE + ++L +L+P +LR
Sbjct: 1142 EELFSLLHFLEPSRFPSETTFMQEFG----------DLKTEEQV---QKLQAILKPMMLR 1188
Query: 782 RLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMN 840
RLK++VE L K E II+ +++ +QK YR + K L+ G L+N
Sbjct: 1189 RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGG-----GQANVPNLLN 1243
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPD-----LYRVSGKFELLDRILPKLK 895
T+++LRK CNHP++ EEK + + PD + + +GK L+D++LPKLK
Sbjct: 1244 TMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLK 1303
Query: 896 STGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
+ GHRVL+F QM + ++ILEDY R + Y R+DG + R + +F+ PDS+ F+F+
Sbjct: 1304 AGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1363
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V++ RL+T NS E
Sbjct: 1364 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYERE 1423
Query: 1016 ILAAARYKLNMDEKVIQAGMFDQKSTGSERH---QFLQTILHQD------DEEDEEENAV 1066
+ A KL +D+ V+Q+ + +T + + ++ +L + DEEDE
Sbjct: 1424 MFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFC 1483
Query: 1067 PDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFE 1126
+D ++Q+L R I++E + K+ + D + + ++WA +
Sbjct: 1484 EED--IDQILLRRTHTIT----IESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKK 1537
Query: 1127 AKEEEKALHMGRGS------RQRKQVDYTDSLTEKEWLK 1159
A+ + AL+ GR + R RKQ ++ E E ++
Sbjct: 1538 AELDIDALN-GRNNLVIDTPRVRKQTRLYSAVKEDELME 1575
Score = 46 (21.3 bits), Expect = 2.2e-104, Sum P(4) = 2.2e-104
Identities = 16/60 (26%), Positives = 31/60 (51%)
Query: 280 KRQGLKEARATEKLEK--QQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRL 337
+RQ + +A+ E+ EK ++ E ER +R ++ + + +EY NN+ R +L
Sbjct: 920 RRQDIDQAKI-EEFEKLMSREPETERVERPPADDW-----KKSESSREYKNNNKLREYQL 973
Score = 42 (19.8 bits), Expect = 2.2e-104, Sum P(4) = 2.2e-104
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 1114 IKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQ 1145
+KEDE +E E+ EEK R + + Q
Sbjct: 1568 VKEDELMEFSDLESDSEEKPCAKPRRPQDKSQ 1599
Score = 39 (18.8 bits), Expect = 2.2e-104, Sum P(4) = 2.2e-104
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 1273 IEDGKYSSVDELQKDFKTLCRNAQIY 1298
+ G+Y ++D +T+CR +Y
Sbjct: 1625 LSHGRYKR-QLTEQDVETICRTILVY 1649
>UNIPROTKB|F1P5V4 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IEA] [GO:0031508 "centromeric heterochromatin
assembly" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0046651 "lymphocyte
proliferation" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 OMA:ETFYTAI
GO:GO:0006346 GO:GO:0046651 GeneTree:ENSGT00550000075106
EMBL:AADN02027839 EMBL:AADN02027838 IPI:IPI00823178
Ensembl:ENSGALT00000008749 ArrayExpress:F1P5V4 Uniprot:F1P5V4
Length = 839
Score = 598 (215.6 bits), Expect = 3.1e-104, Sum P(3) = 3.1e-104
Identities = 121/271 (44%), Positives = 175/271 (64%)
Query: 547 EQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVN 606
+Q I G ++ YQ++G+EW+ L+ N +NGILADEMGLGKTIQ IA I LM ++ V
Sbjct: 212 QQPKIFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTIQCIATIA-LMVERGVP 270
Query: 607 GPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTL----QAQMKASKFN-VLLT 661
GPFL+ PLSTL NW EF+R+ P + ++ Y G+ R+ L + + K + V++T
Sbjct: 271 GPFLVCGPLSTLPNWMSEFKRFTPEIPLMLYHGAQQERRKLVRKIHGRQGSLKIHPVVIT 330
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
++E ++D+ L WKY+I+DEGHR+KN +C+L L F A ++LLLTGTPLQN L
Sbjct: 331 SFEIAMRDRNALQSCFWKYLIVDEGHRIKNMNCRLIRELKRFN-ADNKLLLTGTPLQNNL 389
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFNAPFAT-TGEKVELNEEETILIIRRLHKVLRPFLL 780
ELW+LLNFLLP +F + +FE WF+ T T E + E+E I+ LH++L PFLL
Sbjct: 390 AELWSLLNFLLPDVFDDLKSFESWFDITSITETAEDIIAKEKEQN-ILHMLHQILTPFLL 448
Query: 781 RRLKKEVESQLPDKVEYIIKCDMSGLQKVLY 811
RRLK +V ++P K E ++ ++ Q+ Y
Sbjct: 449 RRLKSDVALEVPPKREVVVYAPLAKKQETFY 479
Score = 489 (177.2 bits), Expect = 3.1e-104, Sum P(3) = 3.1e-104
Identities = 112/267 (41%), Positives = 161/267 (60%)
Query: 838 LMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKST 897
L N ++ LRK CNHP++ IE + DL + SGKF LLDR+LP+LK
Sbjct: 560 LQNIMMLLRKCCNHPYL---IEYPLDPATQQFKV--DEDLVKNSGKFLLLDRMLPELKKR 614
Query: 898 GHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLS 957
GH+VL+F QMT +++IL DY RGFK+ RLDG+ DR + + +FN D E F+F++S
Sbjct: 615 GHKVLMFSQMTMMLDILMDYCYLRGFKFSRLDGSMSYSDREENMHQFNN-DPEVFLFLVS 673
Query: 958 TRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERIL 1017
TRAGGLG+NL ADTVII+DSDWNP DLQAQDR HRIGQ V V RL+T N+++++I+
Sbjct: 674 TRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIV 733
Query: 1018 AAARYKLNMDEKVIQAGMFDQKSTGSERH------QFLQTILHQDDEEDEEENA---VPD 1068
A K +++ +I F +G + Q L +L D E E + + V
Sbjct: 734 ERAAAKRKLEKLIIHKNQFKGGKSGLAQSKSCLDPQELIELLKSRDYEREVKGSKEKVIS 793
Query: 1069 DETVNQMLARSE--EEFQTYQRIDAER 1093
D+ + +L RS+ ++ +T + + E+
Sbjct: 794 DKDLELLLDRSDLIDQMKTSETVKKEK 820
Score = 47 (21.6 bits), Expect = 3.1e-104, Sum P(3) = 3.1e-104
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 278 RTKRQGLKEARATEKLEKQQKVEAERKKRQ 307
+ ++Q L+E + EKLEK++++ + K Q
Sbjct: 84 KMEQQQLEEQKRKEKLEKKREMMLKSAKGQ 113
Score = 46 (21.3 bits), Expect = 4.0e-104, Sum P(3) = 4.0e-104
Identities = 21/111 (18%), Positives = 47/111 (42%)
Query: 197 LDPLIILQERENRVA-LNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLRA 255
+ P ++ +E + A L ER++ E S R +E+ + L+ L + + +
Sbjct: 25 ITPAMLAEEEQLEAAGLEKERQMMEKARSAWD------RESSEMRYKRLQHLLEKSNIYS 78
Query: 256 EVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKR 306
+ + LE + ++ + LK A+ + +++ A +KKR
Sbjct: 79 KFLLTKMEQQQLEEQKRKEKLEKKREMMLKSAKGQNPADGKEEKSATKKKR 129
Score = 39 (18.8 bits), Expect = 2.2e-103, Sum P(3) = 2.2e-103
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 61 IDSMKEQGLEEDPRYQKL 78
+ M++Q LEE R +KL
Sbjct: 82 LTKMEQQQLEEQKRKEKL 99
>UNIPROTKB|F1N734 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:DAAA02036652 EMBL:DAAA02036653 EMBL:DAAA02036654
EMBL:DAAA02036655 IPI:IPI00924240 Ensembl:ENSBTAT00000061177
ArrayExpress:F1N734 Uniprot:F1N734
Length = 2720
Score = 993 (354.6 bits), Expect = 1.6e-103, Sum P(4) = 1.6e-103
Identities = 240/638 (37%), Positives = 358/638 (56%)
Query: 554 NGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIV 613
+ +L+EYQ++G+ W++ + N N ILADEMGLGKTIQ+I ++ + + ++GPFLII
Sbjct: 457 SNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIF-LRGIHGPFLIIA 515
Query: 614 PLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ--------AQMK----ASKFNVLLT 661
PLST++NW EF W +N + Y GS R+ +Q AQ KF+V++T
Sbjct: 516 PLSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVIT 574
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
T+E ++ D L K+HW +IIDE HR+KN +CKL L + H++LLTGTPLQN +
Sbjct: 575 TFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALE-HKVLLTGTPLQNSV 633
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 781
EL++LLNFL PS F S + F + F +L EE + ++L +L+P +LR
Sbjct: 634 EELFSLLNFLEPSQFPSETAFLEEFG----------DLKTEEQV---KKLQSILKPMMLR 680
Query: 782 RLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMN 840
RLK +VE L K E II+ +++ +QK YR + K L+ G+ L+N
Sbjct: 681 RLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPN-----LIN 735
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPD-----LYRVSGKFELLDRILPKLK 895
T+++LRK CNHP++ EEK + + PD + + +GK L+D++LPKL
Sbjct: 736 TMMELRKCCNHPYLISGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLI 795
Query: 896 STGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
+ GH+VL+F QM + ++ILEDY R + Y R+DG + R + +F PDS+ F+F+
Sbjct: 796 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 855
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+T NS E
Sbjct: 856 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYERE 915
Query: 1016 ILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQT--ILHQD------DEEDEEENAVP 1067
+ A KL +D+ V+Q + G ++ ++ +L + DEEDE
Sbjct: 916 MFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCE 975
Query: 1068 DDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWA--- 1124
+D ++Q+L R I +E + K+ + D + + ++WA
Sbjct: 976 ED--IDQILQRRTHTIT----IQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIA 1029
Query: 1125 ---FEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLK 1159
EAK E+++L + R R RKQ + +S E E ++
Sbjct: 1030 ELDTEAKSEKESLVLDR-PRVRKQTKHYNSFEEDELME 1066
Score = 55 (24.4 bits), Expect = 1.6e-103, Sum P(4) = 1.6e-103
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 63 SMKEQGLEEDPRY-QKLIEMKANRTEIKHAFT 93
+M+E LE+DPR QK+ + + ++KH FT
Sbjct: 333 TMEE--LEKDPRIAQKIKRFRNKQAQMKHIFT 362
Score = 43 (20.2 bits), Expect = 1.6e-103, Sum P(4) = 1.6e-103
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 1103 LIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQR 1143
L+E L L+ ++ E + EE++L + G R+R
Sbjct: 1850 LLESKSLESKLVLGPNHSDEEDDEDENEEESLELAAGRRER 1890
Score = 39 (18.8 bits), Expect = 1.6e-103, Sum P(4) = 1.6e-103
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 1274 EDGKYSSVDELQKDFKTLCRNAQI---YNEELS 1303
ED Y S +EL KD C++ Y+EE S
Sbjct: 2026 EDMDYESKEELDKDGN--CQSQDYPGKYSEEES 2056
Score = 39 (18.8 bits), Expect = 7.7e-102, Sum P(4) = 7.7e-102
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 289 ATEKLEKQQKVEAERKKRQKHQE 311
+TE + Q++ + KR+K+ E
Sbjct: 226 STESADSQKRRSGRQVKRRKYNE 248
Score = 38 (18.4 bits), Expect = 9.9e-102, Sum P(4) = 9.9e-102
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 277 KRTKRQGLKEARATEKLEKQQKVEAERKKRQK 308
KR R+ LKE R K ++ +K + R+ +QK
Sbjct: 121 KREPRE-LKEPR---KAKEPRKAKEPREPKQK 148
>MGI|MGI:2444748 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=ISO] [GO:0001568 "blood vessel development" evidence=IMP]
[GO:0001701 "in utero embryonic development" evidence=ISO;IMP]
[GO:0003007 "heart morphogenesis" evidence=ISO;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007417 "central
nervous system development" evidence=ISO] [GO:0007512 "adult heart
development" evidence=IMP] [GO:0007605 "sensory perception of
sound" evidence=IMP] [GO:0007626 "locomotory behavior"
evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
[GO:0008015 "blood circulation" evidence=IMP] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0021545 "cranial nerve
development" evidence=ISO] [GO:0030217 "T cell differentiation"
evidence=ISO] [GO:0030540 "female genitalia development"
evidence=IMP] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0042471 "ear morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis"
evidence=ISO;IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043584 "nose development" evidence=ISO;IMP]
[GO:0048752 "semicircular canal morphogenesis" evidence=IGI]
[GO:0048806 "genitalia development" evidence=ISO] [GO:0048844
"artery morphogenesis" evidence=IGI] [GO:0050890 "cognition"
evidence=ISO] [GO:0060021 "palate development" evidence=ISO;IMP]
[GO:0060041 "retina development in camera-type eye" evidence=ISO]
[GO:0060123 "regulation of growth hormone secretion" evidence=ISO]
[GO:0060173 "limb development" evidence=ISO] [GO:0060324 "face
development" evidence=ISO] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 MGI:MGI:2444748 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0008015 GO:GO:0003007 GO:GO:0050890 GO:GO:0001701
GO:GO:0040018 GO:GO:0007417 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0043010 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0030540 GO:GO:0007628 GO:GO:0030217
GO:GO:0048752 InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
CTD:55636 HOGENOM:HOG000246942 KO:K14437 OrthoDB:EOG4MCWZD
OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584 GO:GO:0060123 EMBL:AK042727
EMBL:AK171051 EMBL:AK171857 EMBL:AK172025 EMBL:AL732627
EMBL:AL805903 EMBL:BC034239 IPI:IPI00345676 IPI:IPI00666779
IPI:IPI00849588 RefSeq:NP_001074886.1 UniGene:Mm.138792
ProteinModelPortal:A2AJK6 SMR:A2AJK6 IntAct:A2AJK6 STRING:A2AJK6
PhosphoSite:A2AJK6 PaxDb:A2AJK6 PRIDE:A2AJK6
Ensembl:ENSMUST00000039267 Ensembl:ENSMUST00000051558
Ensembl:ENSMUST00000127476 GeneID:320790 KEGG:mmu:320790
UCSC:uc008rxy.1 UCSC:uc008rya.1 GeneTree:ENSGT00560000077077
InParanoid:A2AJK6 NextBio:397435 Bgee:A2AJK6 CleanEx:MM_CHD7
Genevestigator:A2AJK6 Uniprot:A2AJK6
Length = 2986
Score = 1014 (362.0 bits), Expect = 1.9e-103, Sum P(4) = 1.9e-103
Identities = 242/639 (37%), Positives = 363/639 (56%)
Query: 554 NGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIV 613
N KL+EYQ++G+ W++ + N N ILADEMGLGKTIQ+I + Y + K ++GPFL+I
Sbjct: 955 NNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIA 1013
Query: 614 PLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQ-----------MKAS-KFNVLLT 661
PLST+ NW EF W +NVV Y GS R+T+Q +K S KF+ ++T
Sbjct: 1014 PLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 1072
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
T+E ++ D L + W+ ++IDE HR+KN +CKL L + H++LLTGTPLQN +
Sbjct: 1073 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLE-HKVLLTGTPLQNTV 1131
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 781
EL++LL+FL PS F S +TF Q F +L EE + ++L +L+P +LR
Sbjct: 1132 EELFSLLHFLEPSRFPSETTFMQEFG----------DLKTEEQV---QKLQAILKPMMLR 1178
Query: 782 RLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMN 840
RLK++VE L K E II+ +++ +QK YR + K L+ G L+N
Sbjct: 1179 RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGG-----GQANVPNLLN 1233
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPD-----LYRVSGKFELLDRILPKLK 895
T+++LRK CNHP++ EEK + + PD + + +GK L+D++LPKLK
Sbjct: 1234 TMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLK 1293
Query: 896 STGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
+ GHRVL+F QM + ++ILEDY R + Y R+DG + R + +F+ PDS+ F+F+
Sbjct: 1294 AGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1353
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V++ RL+T NS E
Sbjct: 1354 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYERE 1413
Query: 1016 ILAAARYKLNMDEKVIQAGMFDQKSTGSERH---QFLQTILHQD------DEEDEEENAV 1066
+ A KL +D+ V+Q+ + +T + + ++ +L + DEEDE
Sbjct: 1414 MFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFC 1473
Query: 1067 PDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFE 1126
+D ++Q+L R I++E + K+ + D + + ++WA +
Sbjct: 1474 EED--IDQILLRRTHTIT----IESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKK 1527
Query: 1127 AKEEEKALHMGRGS------RQRKQVDYTDSLTEKEWLK 1159
A+ + AL+ GR + R RKQ ++ E E ++
Sbjct: 1528 AELDIDALN-GRNNLVIDTPRVRKQTRLYSAVKEDELME 1565
Score = 42 (19.8 bits), Expect = 1.9e-103, Sum P(4) = 1.9e-103
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 1114 IKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQ 1145
+KEDE +E E+ EEK R + + Q
Sbjct: 1558 VKEDELMEFSDLESDSEEKPCAKPRRPQDKSQ 1589
Score = 39 (18.8 bits), Expect = 1.9e-103, Sum P(4) = 1.9e-103
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 298 KVEAERKKRQKHQEYITTVLQHCKDFKEYHRNN 330
+V A+ + K +Y+ ++ Q + K+ +NN
Sbjct: 565 QVSAQNAQLVKSDDYLPSIEQQPQQKKKKKKNN 597
Score = 38 (18.4 bits), Expect = 2.4e-103, Sum P(4) = 2.4e-103
Identities = 11/54 (20%), Positives = 26/54 (48%)
Query: 284 LKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRL 337
LK+ K+E+ +K+ + + ++ + + + +EY NN+ R +L
Sbjct: 910 LKQDIDQTKIEEFEKLMSREPETERVERPPADDWKKSESSREYKNNNKLREYQL 963
Score = 37 (18.1 bits), Expect = 1.9e-103, Sum P(4) = 1.9e-103
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 1273 IEDGKYSSVDELQKDFKTLCRNAQIY 1298
+ G+Y ++D +T+CR +Y
Sbjct: 1615 LSHGRYKR-QLTEQDVETICRAILVY 1639
>UNIPROTKB|Q06A37 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:DQ978381 IPI:IPI00590082
RefSeq:NP_001071054.1 UniGene:Gga.20865 ProteinModelPortal:Q06A37
SMR:Q06A37 GeneID:421140 KEGG:gga:421140 CTD:55636
HOGENOM:HOG000246942 InParanoid:Q06A37 KO:K14437 OrthoDB:EOG4MCWZD
NextBio:20823957 Uniprot:Q06A37
Length = 3011
Score = 1012 (361.3 bits), Expect = 2.0e-103, Sum P(4) = 2.0e-103
Identities = 241/639 (37%), Positives = 362/639 (56%)
Query: 554 NGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIV 613
N KL+EYQ++G+ W++ + N N ILADEMGLGKTIQ+I + Y + K ++GPFL+I
Sbjct: 966 NNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIA 1024
Query: 614 PLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQ-----------MKAS-KFNVLLT 661
PLST+ NW EF W +NVV Y GS R+T+Q +K S KF+ ++T
Sbjct: 1025 PLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 1083
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
T+E ++ D L + W+ ++IDE HR+KN +CKL L + H++LLTGTPLQN +
Sbjct: 1084 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLE-HKVLLTGTPLQNTV 1142
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 781
EL++LL+FL P F S +TF Q F +L EE + ++L +L+P +LR
Sbjct: 1143 EELFSLLHFLEPGRFPSETTFMQEFG----------DLKTEEQV---QKLQAILKPMMLR 1189
Query: 782 RLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMN 840
RLK++VE L K E II+ +++ +QK YR + K L+ G L+N
Sbjct: 1190 RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGG-----GQANVPNLLN 1244
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPD-----LYRVSGKFELLDRILPKLK 895
T+++LRK CNHP++ EEK + + PD + + +GK L+D++LPKLK
Sbjct: 1245 TMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLK 1304
Query: 896 STGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
+ GHRVL+F QM + ++ILEDY R + Y R+DG + R + +F+ PDS+ F+F+
Sbjct: 1305 AGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFL 1364
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V++ RL+T NS E
Sbjct: 1365 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYERE 1424
Query: 1016 ILAAARYKLNMDEKVIQAGMFDQKSTGSERH---QFLQTILHQD------DEEDEEENAV 1066
+ A KL +D+ V+Q+ + +T + + ++ +L + DEEDE
Sbjct: 1425 MFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFC 1484
Query: 1067 PDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFE 1126
+D ++Q+L R I++E + K+ + D + + ++WA +
Sbjct: 1485 EED--IDQILLRRTHTIT----IESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKK 1538
Query: 1127 AKEEEKALHMGRGS------RQRKQVDYTDSLTEKEWLK 1159
A+ + AL+ GR + R RKQ ++ E E ++
Sbjct: 1539 AELDIDALN-GRNNLVIDTPRVRKQTRLYSAVKEDELME 1576
Score = 41 (19.5 bits), Expect = 2.0e-103, Sum P(4) = 2.0e-103
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 1114 IKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQ 1145
+KEDE +E E+ EEK R + + Q
Sbjct: 1569 VKEDELMEFSDLESDSEEKPSTKPRRPQDKSQ 1600
Score = 40 (19.1 bits), Expect = 2.0e-103, Sum P(4) = 2.0e-103
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 281 RQGLKEARATEKLEK--QQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRL 337
+Q + +A+ E+ EK ++ E ER +R ++ + + +EY NN+ R +L
Sbjct: 922 KQDIDQAKI-EEFEKLMSREPEMERVERPPADDW-----KKSESSREYKNNNKLREYQL 974
Score = 39 (18.8 bits), Expect = 2.0e-103, Sum P(4) = 2.0e-103
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 1273 IEDGKYSSVDELQKDFKTLCRNAQIY 1298
+ G+Y ++D +T+CR +Y
Sbjct: 1626 LSHGRYKR-QLTEQDVETICRTILVY 1650
>UNIPROTKB|E1BPM4 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:DAAA02038386
EMBL:DAAA02038387 EMBL:DAAA02038388 IPI:IPI00697020
Ensembl:ENSBTAT00000026607 Uniprot:E1BPM4
Length = 2940
Score = 1008 (359.9 bits), Expect = 2.2e-103, Sum P(4) = 2.2e-103
Identities = 242/640 (37%), Positives = 364/640 (56%)
Query: 554 NGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIV 613
N KL+EYQ++G+ W++ + N N ILADEMGLGKTIQ+I + Y + K ++GPFL+I
Sbjct: 915 NNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIA 973
Query: 614 PLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQ-----------MKAS-KFNVLLT 661
PLST+ NW EF W +NVV Y GS R+T+Q +K S KF+ ++T
Sbjct: 974 PLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 1032
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
T+E ++ D L + W+ ++IDE HR+KN +CKL L + H++LLTGTPLQN +
Sbjct: 1033 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLE-HKVLLTGTPLQNTV 1091
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 781
EL++LL+FL P+ F S +TF Q F +L EE + ++L +L+P +LR
Sbjct: 1092 EELFSLLHFLEPTRFPSETTFMQEFG----------DLKTEEQV---QKLQAILKPMMLR 1138
Query: 782 RLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMN 840
RLK++VE L K E II+ +++ +QK YR + K L+ G L+N
Sbjct: 1139 RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGG-----GQANVPNLLN 1193
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPD-----LYRVSGKFELLDRILPKLK 895
T+++LRK CNHP++ EEK + + PD + + +GK L+D++LPKLK
Sbjct: 1194 TMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLK 1253
Query: 896 STGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
+ GHRVL+F QM + ++ILEDY R + Y R+DG + R + +F+ PDS+ F+F+
Sbjct: 1254 AGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1313
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V++ RL+T NS E
Sbjct: 1314 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYERE 1373
Query: 1016 ILAAARYKLNMDEKVIQAGMFDQKSTGSERHQF----LQTILHQD------DEEDEEENA 1065
+ A KL +D+ V+Q+ M +++ + Q ++ +L + DEEDE
Sbjct: 1374 MFDKASLKLGLDKAVLQS-MSGRENAPNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKF 1432
Query: 1066 VPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAF 1125
+D ++Q+L R I++E + K+ + D + + ++WA
Sbjct: 1433 CEED--IDQILLRRTHTIT----IESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAK 1486
Query: 1126 EAKEEEKALHMGRGS------RQRKQVDYTDSLTEKEWLK 1159
+A+ + AL+ GR + R RKQ ++ E E ++
Sbjct: 1487 KAELDIDALN-GRNNLVIDTPRVRKQTRLYSAVKEDELME 1525
Score = 45 (20.9 bits), Expect = 1.6e-102, Sum P(3) = 1.6e-102
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 1126 EAKEEEKALHMGRGSRQRKQVD 1147
E KEEE+A G+ RQ ++ +
Sbjct: 2132 EGKEEEEAEGSGKDQRQDREAE 2153
Score = 44 (20.5 bits), Expect = 2.2e-103, Sum P(4) = 2.2e-103
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 281 RQGLKEARATEKLEK--QQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRL 337
RQ + +A+ E+ EK ++ E ER +R ++ + + +EY NN+ R +L
Sbjct: 871 RQDIDQAKI-EEFEKLMSREPETERVERPPADDW-----KKSESSREYKNNNKLREYQL 923
Score = 42 (19.8 bits), Expect = 2.2e-103, Sum P(4) = 2.2e-103
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 1114 IKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQ 1145
+KEDE +E E+ EEK R R Q
Sbjct: 1518 VKEDELMEFSDLESDSEEKPCTKPRRPPDRSQ 1549
Score = 37 (18.1 bits), Expect = 2.2e-103, Sum P(4) = 2.2e-103
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 1285 QKDFKTLCRNAQIY 1298
++D +T+CR +Y
Sbjct: 1586 EQDVETICRTILVY 1599
>UNIPROTKB|E1BAN8 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:DAAA02028556 EMBL:DAAA02028557 IPI:IPI00685860
RefSeq:NP_001192313.1 UniGene:Bt.55708 Ensembl:ENSBTAT00000013708
GeneID:505992 KEGG:bta:505992 NextBio:20867400 Uniprot:E1BAN8
Length = 1566
Score = 673 (242.0 bits), Expect = 2.5e-103, Sum P(4) = 2.5e-103
Identities = 134/326 (41%), Positives = 205/326 (62%)
Query: 552 LVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLI 611
+ NGKLK YQ+KG+ W+ +L+ +NGILADEMGLGKT+Q+IAL+ +L E++ + GPFLI
Sbjct: 522 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLI 581
Query: 612 IVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA--QMKA-----SKFNVLLTTYE 664
I P STL+NW EF R+ P V+ Y G+PH RK ++ K + F+V++T+Y+
Sbjct: 582 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQ 641
Query: 665 YVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPEL 724
V++D ++ W+YM++DE +K+ IL F +RLLLTGTP+QN + EL
Sbjct: 642 LVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCR-NRLLLTGTPIQNTMAEL 700
Query: 725 WALLNFLLPSIFKSVSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHKVLRPFLLRRL 783
WALL+F++P++F S F +WF+ + E K ++E + + RLH +L+PF+LRR+
Sbjct: 701 WALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHMILKPFMLRRI 756
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK-GI--LLTDGSEXXXXXXXXXXXLMN 840
KK+VE++L DK+E ++ C ++ QK+LY+ + K I LL LMN
Sbjct: 757 KKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQTTTSSLMN 816
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHV 866
++Q RK+CNHP +F+ E H+
Sbjct: 817 LVMQFRKVCNHPELFERQETWSPFHI 842
Score = 433 (157.5 bits), Expect = 2.5e-103, Sum P(4) = 2.5e-103
Identities = 94/217 (43%), Positives = 137/217 (63%)
Query: 881 SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL 940
SGK LD +L +LKS GHRVL++ QMT+++++LE+Y YR YMRLDG++K +R D+
Sbjct: 1110 SGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1169
Query: 941 LKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 1000
+ F + + F+F+LSTRAGGLG+NL ADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1170 VADFQTRN-DIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1228
Query: 1001 VRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEED 1060
V V RL+ ++EERIL A+ K + VI G F K + + + +L DDEE
Sbjct: 1229 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNF--KPDTLKPKEVVSLLL--DDEEL 1284
Query: 1061 EEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQ 1097
E++ + +E Q +E + + AE++K++
Sbjct: 1285 EKKLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKE 1321
Score = 58 (25.5 bits), Expect = 2.5e-103, Sum P(4) = 2.5e-103
Identities = 28/120 (23%), Positives = 56/120 (46%)
Query: 203 LQERENRVALNI-ERRIEELNGSLTSTLPEHLRVKAEIELRALKVLN---FQRQLRA-EV 257
L R +V L+I ++ + + N S L ++ + +K + Q Q E
Sbjct: 282 LNARRRKVWLSIVKKELPKANKQKASARNLFLTNSRKLAHQCMKEVRRAALQAQKNCKET 341
Query: 258 IACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVL 317
+ ARR T E + K Y++ +++ K A E LE Q+K++ E ++ ++ Q + ++
Sbjct: 342 LPRARR-LTKEMLLYWKKYEKVEKEHRKRAEK-EALE-QRKLDEEMREAKRQQRKLNFLI 398
Score = 47 (21.6 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 18/67 (26%), Positives = 33/67 (49%)
Query: 732 LPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRR-LHKVLRPFLLRRLKKEVESQ 790
L SI S + E ++ GE+ + +EEE + + R LH +LR ++L + S+
Sbjct: 126 LKSILLSDESSEADSHSEDNDEGEEEDDDEEEELSLSREDLHNMLRLHKYKKLHQNKYSK 185
Query: 791 LPDKVEY 797
+ +Y
Sbjct: 186 EKELQQY 192
Score = 42 (19.8 bits), Expect = 1.8e-62, Sum P(4) = 1.8e-62
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 1113 LIKEDEEIEQWAFEAKEEEKALHMGRG---SRQRKQVDYTDSLTEKEWL 1158
L+ +DEE+E+ ++EEK R+RK+ Y + +++ L
Sbjct: 1277 LLLDDEELEK-KLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKEDEL 1324
Score = 40 (19.1 bits), Expect = 1.9e-101, Sum P(4) = 1.9e-101
Identities = 8/29 (27%), Positives = 19/29 (65%)
Query: 283 GLKEARATEKLEKQQKVEAERKKRQKHQE 311
G K+ + E+ + + K++ +KKR++ +E
Sbjct: 215 GPKKKKFKEEKKLKAKLKKVKKKRRRDEE 243
Score = 39 (18.8 bits), Expect = 2.5e-103, Sum P(4) = 2.5e-103
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 381 QKKDKRLAFLLSQTDEY 397
+++ ++L FL++QT+ Y
Sbjct: 388 KRQQRKLNFLITQTELY 404
Score = 39 (18.8 bits), Expect = 3.6e-62, Sum P(4) = 3.6e-62
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 1070 ETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIE 1105
E V+ +L +EE + R+ E +++Q + +R+ E
Sbjct: 1273 EVVSLLL--DDEELEKKLRLRQEEKRQQEETNRVKE 1306
>MGI|MGI:1915392 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003779 "actin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005874 "microtubule" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0010571 "positive regulation of DNA replication involved in S
phase" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0031011 "Ino80 complex" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0034644 "cellular response to UV"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051225 "spindle
assembly" evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0070914 "UV-damage excision repair" evidence=ISO] [GO:0071479
"cellular response to ionizing radiation" evidence=ISO] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 MGI:MGI:1915392 GO:GO:0005524
GO:GO:0005634 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0070914 GO:GO:2000045 GO:GO:0010571 EMBL:AL844862 KO:K11665
CTD:54617 GeneTree:ENSGT00680000100052 HOGENOM:HOG000231795
HOVERGEN:HBG057875 OMA:KVIRKFW OrthoDB:EOG4ZKJKF EMBL:AK040612
EMBL:AK129317 EMBL:BC059235 IPI:IPI00378561 IPI:IPI00785415
RefSeq:NP_080850.2 UniGene:Mm.330496 ProteinModelPortal:Q6ZPV2
SMR:Q6ZPV2 IntAct:Q6ZPV2 STRING:Q6ZPV2 PhosphoSite:Q6ZPV2
PaxDb:Q6ZPV2 PRIDE:Q6ZPV2 Ensembl:ENSMUST00000049920
Ensembl:ENSMUST00000110808 GeneID:68142 KEGG:mmu:68142
InParanoid:Q6ZPV2 NextBio:326516 Bgee:Q6ZPV2 Genevestigator:Q6ZPV2
GermOnline:ENSMUSG00000034154 Uniprot:Q6ZPV2
Length = 1559
Score = 670 (240.9 bits), Expect = 3.4e-103, Sum P(4) = 3.4e-103
Identities = 134/326 (41%), Positives = 204/326 (62%)
Query: 552 LVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLI 611
+ NGKLK YQ+KG+ W+ +L+ +NGILADEMGLGKT+Q+IAL+ +L E++ + GPFLI
Sbjct: 515 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLI 574
Query: 612 IVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA--QMKA-----SKFNVLLTTYE 664
I P STL+NW EF R+ P V+ Y G+PH RK ++ K + F+V++T+Y+
Sbjct: 575 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQ 634
Query: 665 YVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPEL 724
V++D ++ W+YM++DE +K+ IL F +RLLLTGTP+QN + EL
Sbjct: 635 LVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCR-NRLLLTGTPIQNTMAEL 693
Query: 725 WALLNFLLPSIFKSVSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHKVLRPFLLRRL 783
WALL+F++P++F S F +WF+ + E K ++E + + RLH +L+PF+LRR+
Sbjct: 694 WALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHMILKPFMLRRI 749
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK-GI--LLTDGSEXXXXXXXXXXXLMN 840
KK+VE++L DK+E + C ++ QK+LY+ + K I LL LMN
Sbjct: 750 KKDVENELSDKIEILTYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMN 809
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHV 866
++Q RK+CNHP +F+ E H+
Sbjct: 810 LVMQFRKVCNHPELFERQETWSPFHI 835
Score = 434 (157.8 bits), Expect = 3.4e-103, Sum P(4) = 3.4e-103
Identities = 94/217 (43%), Positives = 138/217 (63%)
Query: 881 SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL 940
SGK LD +L +LKS GHRVL++ QMT+++++LE+Y YR YMRLDG++K +R D+
Sbjct: 1103 SGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1162
Query: 941 LKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 1000
+ F + + F+F+LSTRAGGLG+NL ADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1163 VADFQTRN-DIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1221
Query: 1001 VRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEED 1060
V V RL+ ++EERIL A+ K + VI G F K + + + +L DDEE
Sbjct: 1222 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNF--KPDTLKPKEVVSLLL--DDEEL 1277
Query: 1061 EEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQ 1097
E++ + +E Q + +E + + AE++K++
Sbjct: 1278 EKKLRLRQEEKRQQEESNRVKERKRKREKYAEKKKKE 1314
Score = 59 (25.8 bits), Expect = 3.4e-103, Sum P(4) = 3.4e-103
Identities = 28/120 (23%), Positives = 57/120 (47%)
Query: 203 LQERENRVALNI-ERRIEELNGSLTSTLPEHLRVKAEIELRALKVLN---FQRQLRA-EV 257
L R +V L+I ++ + + N +S L ++ + +K + Q Q E
Sbjct: 275 LNARRRKVWLSIVKKELPKANKQKSSARNLFLTNSRKLAHQCMKEVRRAALQAQKNCKET 334
Query: 258 IACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVL 317
+ ARR T E + K Y++ +++ K A E LE Q+K++ E ++ ++ Q + ++
Sbjct: 335 LPRARR-LTKEMLLYWKKYEKVEKEHRKRAEK-EALE-QRKLDEEMREAKRQQRKLNFLI 391
Score = 42 (19.8 bits), Expect = 3.0e-62, Sum P(4) = 3.0e-62
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 1113 LIKEDEEIEQWAFEAKEEEKALHMGRG---SRQRKQVDYTDSLTEKEWL 1158
L+ +DEE+E+ ++EEK R+RK+ Y + +++ L
Sbjct: 1270 LLLDDEELEK-KLRLRQEEKRQQEESNRVKERKRKREKYAEKKKKEDEL 1317
Score = 41 (19.5 bits), Expect = 2.6e-101, Sum P(4) = 2.6e-101
Identities = 8/30 (26%), Positives = 19/30 (63%)
Query: 283 GLKEARATEKLEKQQKVEAERKKRQKHQEY 312
G K+ + E + + K++ +KKR++ +E+
Sbjct: 208 GPKKKKFKEDKKLKAKLKKVKKKRRRDEEF 237
Score = 40 (19.1 bits), Expect = 4.9e-62, Sum P(4) = 4.9e-62
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 1070 ETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIE 1105
E V+ +L +EE + R+ E +++Q + +R+ E
Sbjct: 1266 EVVSLLL--DDEELEKKLRLRQEEKRQQEESNRVKE 1299
Score = 39 (18.8 bits), Expect = 3.4e-103, Sum P(4) = 3.4e-103
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 381 QKKDKRLAFLLSQTDEY 397
+++ ++L FL++QT+ Y
Sbjct: 381 KRQQRKLNFLITQTELY 397
Score = 37 (18.1 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 761 EEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEY 797
EEE L LH +LR ++L + S+ + +Y
Sbjct: 149 EEELSLSREELHNMLRLHKYKKLHQNKYSKDKELQQY 185
>UNIPROTKB|F1NYY9 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=IEA] [GO:0031011 "Ino80
complex" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0043014 "alpha-tubulin binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051225 "spindle
assembly" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 GO:GO:0005524
GO:GO:0030307 GO:GO:0051225 GO:GO:0003677 GO:GO:0045944
GO:GO:0016887 GO:GO:0006338 GO:GO:0000070 GO:GO:0031011
GO:GO:0000724 GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914
GO:GO:2000045 GO:GO:0010571 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AADN02033529 EMBL:AADN02033530 IPI:IPI00604387
Ensembl:ENSGALT00000013933 Uniprot:F1NYY9
Length = 1564
Score = 671 (241.3 bits), Expect = 3.4e-103, Sum P(3) = 3.4e-103
Identities = 134/326 (41%), Positives = 204/326 (62%)
Query: 552 LVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLI 611
+ NGKLK YQ+KG+ W+ +L+ +NGILADEMGLGKT+Q+IAL+ +L E++ + GPFLI
Sbjct: 518 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLI 577
Query: 612 IVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA--QMKA-----SKFNVLLTTYE 664
I P STL+NW EF R+ P V+ Y G+PH RK ++ K + F+V++T+Y+
Sbjct: 578 ISPASTLNNWHQEFARFVPKFKVLPYWGNPHDRKVIRKFWSQKTLYTQDAPFHVVITSYQ 637
Query: 665 YVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPEL 724
V++D ++ W+YM++DE +K+ IL F +RLLLTGTP+QN + EL
Sbjct: 638 LVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCR-NRLLLTGTPIQNTMAEL 696
Query: 725 WALLNFLLPSIFKSVSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHKVLRPFLLRRL 783
WALL+F++P++F S F +WF+ + E K ++E + + RLH +L+PF+LRR+
Sbjct: 697 WALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHMILKPFMLRRI 752
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK-GI--LLTDGSEXXXXXXXXXXXLMN 840
KK+VE++L DK+E ++ C + QK+LY+ + K I LL LMN
Sbjct: 753 KKDVENELSDKIEILMYCQQTSRQKLLYQALKNKISIDDLLQSSMGTTQQAQTTTSSLMN 812
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHV 866
++Q RK+CNHP +F+ E H+
Sbjct: 813 LVMQFRKVCNHPELFERQETWSPFHI 838
Score = 431 (156.8 bits), Expect = 3.4e-103, Sum P(3) = 3.4e-103
Identities = 94/217 (43%), Positives = 136/217 (62%)
Query: 881 SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL 940
SGK LD +L +LKS GHRVL++ QMT+++++LE+Y YR YMRLDG++K +R D+
Sbjct: 1108 SGKLHALDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1167
Query: 941 LKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 1000
+ F + + F+F+LSTRAGGLG+NL ADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1168 VADFQNRN-DIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1226
Query: 1001 VRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEED 1060
V V RL+ ++EERIL A+ K + VI G F K + + + +L DDEE
Sbjct: 1227 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNF--KPDTLKPKEVVSLLL--DDEEL 1282
Query: 1061 EEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQ 1097
E++ +E Q +E + + AE++K++
Sbjct: 1283 EKKLRQRQEEKRQQEETNRVKERKRKREKYAEKKKKE 1319
Score = 254 (94.5 bits), Expect = 1.4e-84, Sum P(3) = 1.4e-84
Identities = 64/152 (42%), Positives = 90/152 (59%)
Query: 949 SEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMT 1008
++ F+F+LSTRAGGLG+NL ADTVI +DSDWNP D QA DRAHR+GQ +V V RL+
Sbjct: 1175 NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLIC 1234
Query: 1009 VNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPD 1068
++EERIL A+ K + VI G F K + + + +L DDEE E++
Sbjct: 1235 KGTIEERILQRAKEKSEIQRMVISGGNF--KPDTLKPKEVVSLLL--DDEELEKK----- 1285
Query: 1069 DETVNQMLARSEEEFQTYQRIDAERRKEQGKK 1100
L + +EE + Q+ + R KE+ +K
Sbjct: 1286 -------LRQRQEEKR--QQEETNRVKERKRK 1308
Score = 56 (24.8 bits), Expect = 3.4e-103, Sum P(3) = 3.4e-103
Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 247 LNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKR 306
L Q+ + E + ARR T E + K Y++ +++ K A E LE Q+K++ E ++
Sbjct: 328 LQAQKNCK-ETLPRARR-LTKEMLLYWKKYEKVEKEHRKRAEK-EALE-QRKLDEEMREA 383
Query: 307 QKHQEYITTVL 317
++ Q + ++
Sbjct: 384 KRQQRKLNFLI 394
Score = 43 (20.2 bits), Expect = 1.8e-62, Sum P(3) = 1.8e-62
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 1101 SRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKA 1160
S L++ EL L + EE Q + +E+ + + ++K+ D D +KE +
Sbjct: 1274 SLLLDDEELEKKLRQRQEEKRQQEETNRVKERKRKREKYAEKKKKEDELDGKRKKEGMNL 1333
Query: 1161 I 1161
+
Sbjct: 1334 V 1334
Score = 42 (19.8 bits), Expect = 2.3e-62, Sum P(3) = 2.3e-62
Identities = 18/60 (30%), Positives = 26/60 (43%)
Query: 1093 RRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFE-------AKEEEKALHMGRGSRQRKQ 1145
RR+ R +V+ELP +L + E A+ E +AL G GS + KQ
Sbjct: 998 RRRSATSCVRCCQVTELPSFLCIASPRVTAVPLEFYCNDRSAEYERRALREG-GSLEAKQ 1056
Score = 39 (18.8 bits), Expect = 2.1e-101, Sum P(3) = 2.1e-101
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 381 QKKDKRLAFLLSQTDEY 397
+++ ++L FL++QT+ Y
Sbjct: 384 KRQQRKLNFLITQTELY 400
Score = 37 (18.1 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 760 NEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEY 797
+EEE L LH +LR ++L + S+ + +Y
Sbjct: 151 DEEEFSLSREELHNMLRLHKYKKLHQSKYSKDKELQQY 188
>UNIPROTKB|F1PKX5 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000045 "regulation of G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0071479 "cellular response to
ionizing radiation" evidence=IEA] [GO:0070914 "UV-damage excision
repair" evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AAEX03016071 RefSeq:XP_849183.1
Ensembl:ENSCAFT00000015097 GeneID:478262 KEGG:cfa:478262
Uniprot:F1PKX5
Length = 1560
Score = 673 (242.0 bits), Expect = 3.9e-103, Sum P(4) = 3.9e-103
Identities = 134/326 (41%), Positives = 205/326 (62%)
Query: 552 LVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLI 611
+ NGKLK YQ+KG+ W+ +L+ +NGILADEMGLGKT+Q+IAL+ +L E++ + GPFLI
Sbjct: 516 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLI 575
Query: 612 IVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA--QMKA-----SKFNVLLTTYE 664
I P STL+NW EF R+ P V+ Y G+PH RK ++ K + F+V++T+Y+
Sbjct: 576 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQ 635
Query: 665 YVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPEL 724
V++D ++ W+YM++DE +K+ IL F +RLLLTGTP+QN + EL
Sbjct: 636 LVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCR-NRLLLTGTPIQNTMAEL 694
Query: 725 WALLNFLLPSIFKSVSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHKVLRPFLLRRL 783
WALL+F++P++F S F +WF+ + E K ++E + + RLH +L+PF+LRR+
Sbjct: 695 WALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHMILKPFMLRRI 750
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK-GI--LLTDGSEXXXXXXXXXXXLMN 840
KK+VE++L DK+E ++ C ++ QK+LY+ + K I LL LMN
Sbjct: 751 KKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQTTTSSLMN 810
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHV 866
++Q RK+CNHP +F+ E H+
Sbjct: 811 LVMQFRKVCNHPELFERQETWSPFHI 836
Score = 431 (156.8 bits), Expect = 3.9e-103, Sum P(4) = 3.9e-103
Identities = 94/217 (43%), Positives = 137/217 (63%)
Query: 881 SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL 940
SGK LD +L +LKS GHRVL++ QMT+++++LE+Y YR YMRLDG++K +R D+
Sbjct: 1104 SGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1163
Query: 941 LKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 1000
+ F + + F+F+LSTRAGGLG+NL ADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1164 VADFQNRN-DIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1222
Query: 1001 VRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEED 1060
V V RL+ ++EERIL A+ K + VI G F K + + + +L DDEE
Sbjct: 1223 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNF--KPDTLKPKEVVSLLL--DDEEL 1278
Query: 1061 EEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQ 1097
E++ + +E Q +E + + AE++K++
Sbjct: 1279 EKKLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKE 1315
Score = 58 (25.5 bits), Expect = 3.9e-103, Sum P(4) = 3.9e-103
Identities = 28/120 (23%), Positives = 56/120 (46%)
Query: 203 LQERENRVALNI-ERRIEELNGSLTSTLPEHLRVKAEIELRALKVLN---FQRQLRA-EV 257
L R +V L+I ++ + + N S L ++ + +K + Q Q E
Sbjct: 276 LNARRRKVWLSIVKKELPKANKQKASARNLFLTNSRKLAHQCMKEVRRAALQAQKNCKET 335
Query: 258 IACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVL 317
+ ARR T E + K Y++ +++ K A E LE Q+K++ E ++ ++ Q + ++
Sbjct: 336 LPRARR-LTKEMLLYWKKYEKVEKEHRKRAEK-EALE-QRKLDEEMREAKRQQRKLNFLI 392
Score = 42 (19.8 bits), Expect = 1.7e-62, Sum P(4) = 1.7e-62
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 1113 LIKEDEEIEQWAFEAKEEEKALHMGRG---SRQRKQVDYTDSLTEKEWL 1158
L+ +DEE+E+ ++EEK R+RK+ Y + +++ L
Sbjct: 1271 LLLDDEELEK-KLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKEDEL 1318
Score = 41 (19.5 bits), Expect = 2.4e-101, Sum P(4) = 2.4e-101
Identities = 9/38 (23%), Positives = 21/38 (55%)
Query: 283 GLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHC 320
G K+ + E+ + + K++ +KKR++ +E + C
Sbjct: 209 GPKKKKFKEEKKLKAKLKKVKKKRRRDEELSSEESPRC 246
Score = 39 (18.8 bits), Expect = 3.9e-103, Sum P(4) = 3.9e-103
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 381 QKKDKRLAFLLSQTDEY 397
+++ ++L FL++QT+ Y
Sbjct: 382 KRQQRKLNFLITQTELY 398
Score = 39 (18.8 bits), Expect = 3.5e-62, Sum P(4) = 3.5e-62
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 1070 ETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIE 1105
E V+ +L +EE + R+ E +++Q + +R+ E
Sbjct: 1267 EVVSLLL--DDEELEKKLRLRQEEKRQQEETNRVKE 1300
Score = 38 (18.4 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 758 ELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEY 797
E EEE L LH +LR ++L + S+ + +Y
Sbjct: 147 EEEEEELHLSREELHNMLRLHKYKKLHQNKYSKDKELQQY 186
>UNIPROTKB|F1SSV0 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:FP015925 RefSeq:XP_003121636.1 UniGene:Ssc.45003
Ensembl:ENSSSCT00000005252 GeneID:100517567 KEGG:ssc:100517567
Uniprot:F1SSV0
Length = 1566
Score = 673 (242.0 bits), Expect = 4.0e-103, Sum P(4) = 4.0e-103
Identities = 134/326 (41%), Positives = 205/326 (62%)
Query: 552 LVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLI 611
+ NGKLK YQ+KG+ W+ +L+ +NGILADEMGLGKT+Q+IAL+ +L E++ + GPFLI
Sbjct: 522 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLI 581
Query: 612 IVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA--QMKA-----SKFNVLLTTYE 664
I P STL+NW EF R+ P V+ Y G+PH RK ++ K + F+V++T+Y+
Sbjct: 582 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQ 641
Query: 665 YVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPEL 724
V++D ++ W+YM++DE +K+ IL F +RLLLTGTP+QN + EL
Sbjct: 642 LVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCR-NRLLLTGTPIQNTMAEL 700
Query: 725 WALLNFLLPSIFKSVSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHKVLRPFLLRRL 783
WALL+F++P++F S F +WF+ + E K ++E + + RLH +L+PF+LRR+
Sbjct: 701 WALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHMILKPFMLRRI 756
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK-GI--LLTDGSEXXXXXXXXXXXLMN 840
KK+VE++L DK+E ++ C ++ QK+LY+ + K I LL LMN
Sbjct: 757 KKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQTTTSSLMN 816
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHV 866
++Q RK+CNHP +F+ E H+
Sbjct: 817 LVMQFRKVCNHPELFERQETWSPFHI 842
Score = 431 (156.8 bits), Expect = 4.0e-103, Sum P(4) = 4.0e-103
Identities = 94/217 (43%), Positives = 137/217 (63%)
Query: 881 SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL 940
SGK LD +L +LKS GHRVL++ QMT+++++LE+Y YR YMRLDG++K +R D+
Sbjct: 1110 SGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1169
Query: 941 LKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 1000
+ F + + F+F+LSTRAGGLG+NL ADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1170 VADFQNRN-DIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1228
Query: 1001 VRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEED 1060
V V RL+ ++EERIL A+ K + VI G F K + + + +L DDEE
Sbjct: 1229 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNF--KPDTLKPKEVVSLLL--DDEEL 1284
Query: 1061 EEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQ 1097
E++ + +E Q +E + + AE++K++
Sbjct: 1285 EKKLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKE 1321
Score = 58 (25.5 bits), Expect = 4.0e-103, Sum P(4) = 4.0e-103
Identities = 28/120 (23%), Positives = 56/120 (46%)
Query: 203 LQERENRVALNI-ERRIEELNGSLTSTLPEHLRVKAEIELRALKVLN---FQRQLRA-EV 257
L R +V L+I ++ + + N S L ++ + +K + Q Q E
Sbjct: 282 LNARRRKVWLSIVKKELPKANKQKASARNLFLTNSRKLAHQCMKEVRRAALQAQKNCKET 341
Query: 258 IACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVL 317
+ ARR T E + K Y++ +++ K A E LE Q+K++ E ++ ++ Q + ++
Sbjct: 342 LPRARR-LTKEMLLYWKKYEKVEKEHRKRAEK-EALE-QRKLDEEMREAKRQQRKLNFLI 398
Score = 43 (20.2 bits), Expect = 1.5e-101, Sum P(4) = 1.5e-101
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 283 GLKEARATEKLEKQQKVEAERKKRQKHQE 311
G K+ + E+ + + K++ +KKR+K +E
Sbjct: 215 GPKKKKFKEEKKLKAKLKKVKKKRRKDEE 243
Score = 42 (19.8 bits), Expect = 1.8e-62, Sum P(4) = 1.8e-62
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 1113 LIKEDEEIEQWAFEAKEEEKALHMGRG---SRQRKQVDYTDSLTEKEWL 1158
L+ +DEE+E+ ++EEK R+RK+ Y + +++ L
Sbjct: 1277 LLLDDEELEK-KLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKEDEL 1324
Score = 39 (18.8 bits), Expect = 4.0e-103, Sum P(4) = 4.0e-103
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 381 QKKDKRLAFLLSQTDEY 397
+++ ++L FL++QT+ Y
Sbjct: 388 KRQQRKLNFLITQTELY 404
Score = 39 (18.8 bits), Expect = 3.6e-62, Sum P(4) = 3.6e-62
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 1070 ETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIE 1105
E V+ +L +EE + R+ E +++Q + +R+ E
Sbjct: 1273 EVVSLLL--DDEELEKKLRLRQEEKRQQEETNRVKE 1306
Score = 39 (18.8 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 755 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEY 797
E E EEE L LH +LR ++L + S+ + +Y
Sbjct: 150 EDDEEEEEELNLSREELHNMLRLHKYKKLHQNKYSKDKELQQY 192
>UNIPROTKB|Q9ULG1 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0034644 "cellular
response to UV" evidence=IMP] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IMP] [GO:0070914
"UV-damage excision repair" evidence=IMP] [GO:0071479 "cellular
response to ionizing radiation" evidence=IMP] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0030307 "positive regulation of cell growth"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0010571 "positive regulation of DNA
replication involved in S phase" evidence=IMP] [GO:0043014
"alpha-tubulin binding" evidence=IMP] [GO:0051225 "spindle
assembly" evidence=IMP] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0032508 "DNA duplex unwinding" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
GO:GO:0005524 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043014
GO:GO:0003678 GO:GO:0070914 GO:GO:2000045 EMBL:CH471125
GO:GO:0010571 KO:K11665 CTD:54617 ChiTaRS:INO80 EMBL:AB033085
EMBL:BC146785 EMBL:AL137280 IPI:IPI00008091 PIR:T46350
RefSeq:NP_060023.1 UniGene:Hs.292949 ProteinModelPortal:Q9ULG1
SMR:Q9ULG1 DIP:DIP-34296N IntAct:Q9ULG1 STRING:Q9ULG1
PhosphoSite:Q9ULG1 DMDM:114149322 PaxDb:Q9ULG1 PRIDE:Q9ULG1
Ensembl:ENST00000361937 Ensembl:ENST00000401393 GeneID:54617
KEGG:hsa:54617 UCSC:uc001zni.3 GeneCards:GC15M041271
HGNC:HGNC:26956 MIM:610169 neXtProt:NX_Q9ULG1 PharmGKB:PA162392040
HOGENOM:HOG000231795 HOVERGEN:HBG057875 InParanoid:Q9ULG1
OMA:KVIRKFW OrthoDB:EOG4ZKJKF GenomeRNAi:54617 NextBio:57137
ArrayExpress:Q9ULG1 Bgee:Q9ULG1 CleanEx:HS_INO80
Genevestigator:Q9ULG1 GermOnline:ENSG00000128908 Uniprot:Q9ULG1
Length = 1556
Score = 672 (241.6 bits), Expect = 5.1e-103, Sum P(4) = 5.1e-103
Identities = 134/326 (41%), Positives = 205/326 (62%)
Query: 552 LVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLI 611
+ NGKLK YQ+KG+ W+ +L+ +NGILADEMGLGKT+Q+IAL+ +L E++ + GPFLI
Sbjct: 513 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLI 572
Query: 612 IVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA--QMKA-----SKFNVLLTTYE 664
I P STL+NW EF R+ P V+ Y G+PH RK ++ K + F+V++T+Y+
Sbjct: 573 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQ 632
Query: 665 YVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPEL 724
V++D ++ W+YM++DE +K+ IL F +RLLLTGTP+QN + EL
Sbjct: 633 LVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCR-NRLLLTGTPIQNTMAEL 691
Query: 725 WALLNFLLPSIFKSVSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHKVLRPFLLRRL 783
WALL+F++P++F S F +WF+ + E K ++E + + RLH +L+PF+LRR+
Sbjct: 692 WALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHMILKPFMLRRI 747
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK-GI--LLTDGSEXXXXXXXXXXXLMN 840
KK+VE++L DK+E ++ C ++ QK+LY+ + K I LL LMN
Sbjct: 748 KKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMN 807
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHV 866
++Q RK+CNHP +F+ E H+
Sbjct: 808 LVMQFRKVCNHPELFERQETWSPFHI 833
Score = 431 (156.8 bits), Expect = 5.1e-103, Sum P(4) = 5.1e-103
Identities = 94/217 (43%), Positives = 137/217 (63%)
Query: 881 SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL 940
SGK LD +L +LKS GHRVL++ QMT+++++LE+Y YR YMRLDG++K +R D+
Sbjct: 1100 SGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1159
Query: 941 LKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 1000
+ F + + F+F+LSTRAGGLG+NL ADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1160 VADFQNRN-DIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1218
Query: 1001 VRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEED 1060
V V RL+ ++EERIL A+ K + VI G F K + + + +L DDEE
Sbjct: 1219 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNF--KPDTLKPKEVVSLLL--DDEEL 1274
Query: 1061 EEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQ 1097
E++ + +E Q +E + + AE++K++
Sbjct: 1275 EKKLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKE 1311
Score = 58 (25.5 bits), Expect = 5.1e-103, Sum P(4) = 5.1e-103
Identities = 28/120 (23%), Positives = 56/120 (46%)
Query: 203 LQERENRVALNI-ERRIEELNGSLTSTLPEHLRVKAEIELRALKVLN---FQRQLRA-EV 257
L R +V L+I ++ + + N S L ++ + +K + Q Q E
Sbjct: 273 LNARRRKVWLSIVKKELPKANKQKASARNLFLTNSRKLAHQCMKEVRRAALQAQKNCKET 332
Query: 258 IACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVL 317
+ ARR T E + K Y++ +++ K A E LE Q+K++ E ++ ++ Q + ++
Sbjct: 333 LPRARR-LTKEMLLYWKKYEKVEKEHRKRAEK-EALE-QRKLDEEMREAKRQQRKLNFLI 389
Score = 44 (20.5 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
Identities = 13/50 (26%), Positives = 21/50 (42%)
Query: 768 IRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK 817
+++ K L+ LL E +SQ D E + L +L H + K
Sbjct: 119 LKKSRKWLKSILLSDESSEADSQSEDDDEEELNLSREELHNMLRLHKYKK 168
Score = 42 (19.8 bits), Expect = 2.2e-62, Sum P(4) = 2.2e-62
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 1113 LIKEDEEIEQWAFEAKEEEKALHMGRG---SRQRKQVDYTDSLTEKEWL 1158
L+ +DEE+E+ ++EEK R+RK+ Y + +++ L
Sbjct: 1267 LLLDDEELEK-KLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKEDEL 1314
Score = 40 (19.1 bits), Expect = 3.9e-101, Sum P(4) = 3.9e-101
Identities = 8/29 (27%), Positives = 19/29 (65%)
Query: 283 GLKEARATEKLEKQQKVEAERKKRQKHQE 311
G K+ + E+ + + K++ +KKR++ +E
Sbjct: 206 GPKKKKFKEEKKLKAKLKKVKKKRRRDEE 234
Score = 39 (18.8 bits), Expect = 5.1e-103, Sum P(4) = 5.1e-103
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 381 QKKDKRLAFLLSQTDEY 397
+++ ++L FL++QT+ Y
Sbjct: 379 KRQQRKLNFLITQTELY 395
Score = 39 (18.8 bits), Expect = 4.5e-62, Sum P(4) = 4.5e-62
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 1070 ETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIE 1105
E V+ +L +EE + R+ E +++Q + +R+ E
Sbjct: 1263 EVVSLLL--DDEELEKKLRLRQEEKRQQEETNRVKE 1296
Score = 37 (18.1 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 760 NEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEY 797
+EEE L LH +LR ++L + S+ + +Y
Sbjct: 146 DEEELNLSREELHNMLRLHKYKKLHQNKYSKDKELQQY 183
>RGD|1311921 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10116 "Rattus norvegicus" [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0001568 "blood vessel
development" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003007 "heart morphogenesis"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007417 "central
nervous system development" evidence=IEA;ISO] [GO:0007512 "adult
heart development" evidence=IEA;ISO] [GO:0007605 "sensory
perception of sound" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=ISO] [GO:0007628 "adult walking behavior"
evidence=IEA;ISO] [GO:0008015 "blood circulation" evidence=IEA;ISO]
[GO:0021545 "cranial nerve development" evidence=IEA;ISO]
[GO:0030217 "T cell differentiation" evidence=IEA;ISO] [GO:0030540
"female genitalia development" evidence=IEA;ISO] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA;ISO] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IEA;ISO] [GO:0042471 "ear morphogenesis" evidence=ISO]
[GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0043010
"camera-type eye development" evidence=ISO] [GO:0043584 "nose
development" evidence=IEA;ISO] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA;ISO] [GO:0048806 "genitalia
development" evidence=ISO] [GO:0048844 "artery morphogenesis"
evidence=IEA;ISO] [GO:0050890 "cognition" evidence=IEA;ISO]
[GO:0060021 "palate development" evidence=IEA;ISO] [GO:0060041
"retina development in camera-type eye" evidence=IEA;ISO]
[GO:0060123 "regulation of growth hormone secretion"
evidence=IEA;ISO] [GO:0060173 "limb development" evidence=ISO]
[GO:0060324 "face development" evidence=IEA;ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 RGD:1311921 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0008015 GO:GO:0003007
GO:GO:0050890 GO:GO:0001701 GO:GO:0040018 GO:GO:0007417
GO:GO:0003682 GO:GO:0001501 GO:GO:0060041 GO:GO:0007605
GO:GO:0007512 GO:GO:0004386 GO:GO:0035116 GO:GO:0060324
GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030540
GO:GO:0007628 GO:GO:0030217 GO:GO:0048752 InterPro:IPR023780
CTD:55636 KO:K14437 OrthoDB:EOG4MCWZD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 IPI:IPI00366595
RefSeq:XP_003749947.1 PRIDE:D3ZAP7 Ensembl:ENSRNOT00000008901
GeneID:312974 KEGG:rno:312974 UCSC:RGD:1311921 Uniprot:D3ZAP7
Length = 2985
Score = 1015 (362.4 bits), Expect = 6.6e-103, Sum P(3) = 6.6e-103
Identities = 242/639 (37%), Positives = 363/639 (56%)
Query: 554 NGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIV 613
N KL+EYQ++G+ W++ + N N ILADEMGLGKTIQ+I + Y + K ++GPFL+I
Sbjct: 954 NNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIA 1012
Query: 614 PLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQ-----------MKAS-KFNVLLT 661
PLST+ NW EF W +NVV Y GS R+T+Q +K S KF+ ++T
Sbjct: 1013 PLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 1071
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
T+E ++ D L + W+ ++IDE HR+KN +CKL L + H++LLTGTPLQN +
Sbjct: 1072 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLE-HKVLLTGTPLQNTV 1130
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 781
EL++LL+FL PS F S +TF Q F +L EE + ++L +L+P +LR
Sbjct: 1131 EELFSLLHFLEPSRFPSETTFMQEFG----------DLKTEEQV---QKLQAILKPMMLR 1177
Query: 782 RLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMN 840
RLK++VE L K E II+ +++ +QK YR + K L+ G L+N
Sbjct: 1178 RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGG-----GQANVPNLLN 1232
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPD-----LYRVSGKFELLDRILPKLK 895
T+++LRK CNHP++ EEK + + PD + + +GK L+D++LPKLK
Sbjct: 1233 TMMELRKCCNHPYLINGAEEKILEEFKDAHNADSPDFQLQAMIQAAGKLVLIDKLLPKLK 1292
Query: 896 STGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
+ GHRVL+F QM + ++ILEDY R + Y R+DG + R + +F+ PDS+ F+F+
Sbjct: 1293 AGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1352
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V++ RL+T NS E
Sbjct: 1353 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYERE 1412
Query: 1016 ILAAARYKLNMDEKVIQAGMFDQKSTGSERH---QFLQTILHQD------DEEDEEENAV 1066
+ A KL +D+ V+Q+ + +T + + ++ +L + DEEDE
Sbjct: 1413 MFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFC 1472
Query: 1067 PDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFE 1126
+D ++Q+L R I++E + K+ + D + + ++WA +
Sbjct: 1473 EED--IDQILLRRTHTIT----IESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKK 1526
Query: 1127 AKEEEKALHMGRGS------RQRKQVDYTDSLTEKEWLK 1159
A+ + AL+ GR + R RKQ ++ E E ++
Sbjct: 1527 AELDIDALN-GRNNLVIDTPRVRKQTRLYSAVKEDELME 1564
Score = 46 (21.3 bits), Expect = 6.6e-103, Sum P(3) = 6.6e-103
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 281 RQGLKEARATEKLEK--QQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRL 337
RQ L +A+ E+ EK ++ E ER +R ++ + + +EY NN+ R +L
Sbjct: 910 RQDLDQAKI-EEFEKLMSREPETERVERPPADDW-----KKSESSREYKNNNKLREYQL 962
Score = 40 (19.1 bits), Expect = 6.6e-103, Sum P(3) = 6.6e-103
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 1114 IKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQ 1145
+KEDE +E E+ EEK R + + Q
Sbjct: 1557 VKEDELMEFSDLESDSEEKPCIKPRRPQDKTQ 1588
>ZFIN|ZDB-GENE-070912-179 [details] [associations]
symbol:chd7 "chromodomain helicase DNA binding
protein 7" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IMP] [GO:0001756 "somitogenesis" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0021602
"cranial nerve morphogenesis" evidence=IMP] [GO:0001947 "heart
looping" evidence=IMP] [GO:0030282 "bone mineralization"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0014029 "neural crest formation" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-070912-179 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0001756 GO:GO:0042472
GO:GO:0060041 GO:GO:0004386 GO:GO:0001947 GO:GO:0030282
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
GO:GO:0021602 EMBL:CR450710 GO:GO:0014029 IPI:IPI00493585
Ensembl:ENSDART00000016208 Ensembl:ENSDART00000135230
Uniprot:F1QGL1
Length = 3140
Score = 1019 (363.8 bits), Expect = 6.7e-103, Sum P(3) = 6.7e-103
Identities = 242/638 (37%), Positives = 367/638 (57%)
Query: 557 LKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVPLS 616
L+EYQ++G+ W++ + N N ILADEMGLGKTIQ+I + Y + K ++GPFL+I PLS
Sbjct: 1012 LREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIAPLS 1070
Query: 617 TLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQ-----------MK-ASKFNVLLTTYE 664
T+ NW EF W +NVV Y GS RKT+QA +K A KF+ ++TT+E
Sbjct: 1071 TIPNWEREFRTWT-ELNVVVYHGSQASRKTIQAYEMYYRDTQGRIIKGAYKFHAVITTFE 1129
Query: 665 YVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPEL 724
++ D L + W+ +IIDE HR+KN +CKL L + H++LLTGTPLQN + EL
Sbjct: 1130 MILTDCPELRNVPWRCVIIDEAHRLKNRNCKLLEGLKMMDME-HKVLLTGTPLQNTVEEL 1188
Query: 725 WALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 784
++LLNFL P F S STF Q F +L EE + ++L +L+P +LRRLK
Sbjct: 1189 FSLLNFLEPDRFPSESTFMQEFG----------DLKTEEQV---QKLQGILKPMMLRRLK 1235
Query: 785 KEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTD----GSEXXXXXXXXXXXLMN 840
++VE L K E II+ +++ +QK YR + K G L+N
Sbjct: 1236 EDVEKNLAPKEETIIEVELTNVQKKYYRAILEKNFAFLSKSGAGGGSGGGGGSNVPNLLN 1295
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLY-----RVSGKFELLDRILPKLK 895
T+++LRK CNHP++ EEK + + + P+ + + +GK L+D++LPKLK
Sbjct: 1296 TMMELRKCCNHPYLINGAEEKIMEEFRETHPLDQPEFHLQAMIQAAGKLVLIDKLLPKLK 1355
Query: 896 STGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
+ GHRVL+F QM + ++ILEDY R + Y R+DG + R + +F+ PDS+ F+F+
Sbjct: 1356 AGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFL 1415
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V++ RL+T NS E
Sbjct: 1416 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYERE 1475
Query: 1016 ILAAARYKLNMDEKVIQAGMFDQKSTGSERHQF----LQTILHQDDE----EDEEENAVP 1067
+ A KL +D+ V+Q+ M +++ + Q ++ +L + E+E+E +
Sbjct: 1476 MFDKASLKLGLDKAVLQS-MSGRENAANGVQQLSKKEIEDLLRKGAYGALMEEEDEGSKF 1534
Query: 1068 DDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEA 1127
+E ++Q+L R QT I++E + K+ + D +++ + ++WA +A
Sbjct: 1535 CEEDIDQILQRRT---QTIT-IESEGKGSTFAKASFVSAGNRTDISLEDPDFWQKWAKKA 1590
Query: 1128 KEEEKALHMGRGS------RQRKQVDYTDSLTEKEWLK 1159
+ + A++ GR + R RKQ + S+ E + ++
Sbjct: 1591 ELDLDAIN-GRNNLVIDTPRVRKQTRHYSSMKEDDLME 1627
Score = 44 (20.5 bits), Expect = 6.7e-103, Sum P(3) = 6.7e-103
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 1114 IKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQ 1145
+KED+ +E E+ E+K + R + R Q
Sbjct: 1620 MKEDDLMEYSELESDSEDKPIQKPRRPQDRTQ 1651
Score = 39 (18.8 bits), Expect = 6.7e-103, Sum P(3) = 6.7e-103
Identities = 8/32 (25%), Positives = 21/32 (65%)
Query: 291 EKLEKQQKVEAERKKRQKHQEYITTVLQHCKD 322
E+LEK ++++ ++ KR + ++ ++T + D
Sbjct: 888 EELEKDKRIQ-QKIKRFRAKQALSTFVTEMDD 918
Score = 38 (18.4 bits), Expect = 8.6e-103, Sum P(3) = 8.6e-103
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 292 KLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRL 337
K+E+ ++V A + ++ + T+ Q + +EY N R +L
Sbjct: 972 KIEEFERVMAREPQLKRVERPPTSDWQKSESSREYKNANALREYQL 1017
>ASPGD|ASPL0000056677 [details] [associations]
symbol:AN1024 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:BN001308 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000172362 EnsemblFungi:CADANIAT00001623 OMA:NNITELW
Uniprot:C8VTY9
Length = 868
Score = 633 (227.9 bits), Expect = 9.2e-103, Sum P(3) = 9.2e-103
Identities = 126/278 (45%), Positives = 183/278 (65%)
Query: 544 IVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKK 603
+ T+Q + + GK+++YQ++GLEW+ SL+ N L GILADEMGLGKT+Q I+LI + E
Sbjct: 189 VATQQPAPVTGGKMRKYQLEGLEWLKSLWMNGLCGILADEMGLGKTVQAISLIAFFKEHN 248
Query: 604 KVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGS----PHLRKTLQ--AQMKASKFN 657
V+GPFLI PLST+SNW EF RW P + V Y G+ LRK K+ F
Sbjct: 249 -VSGPFLISAPLSTVSNWVDEFARWTPGIKTVLYHGTRDERAQLRKKFMNLRDQKSPDFP 307
Query: 658 VLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPL 717
V+ T+YE + D+ LA+ W+Y+I+DEGHR+KN +C+L L + Y + +RLL+TGTPL
Sbjct: 308 VVCTSYEICMNDRKFLAQYQWRYIIVDEGHRLKNMNCRLIKELLS-YNSANRLLITGTPL 366
Query: 718 QNKLPELWALLNFLLPSIFKSVSTFEQWFN-APFATTGEKVELNEEETILIIRRLHKVLR 776
QN + ELW+LL+FLLP IF +++F+ WF+ + + ++ E ++ +H +L+
Sbjct: 367 QNNITELWSLLHFLLPEIFNDLNSFQNWFDFSSVLDNNGQTDMIERRKRTLVSTMHSILK 426
Query: 777 PFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHM 814
PFLLRR+K +VES LP K EYI+ ++ QK LYR +
Sbjct: 427 PFLLRRVKTDVESALPKKREYILYAPLTLEQKDLYREI 464
Score = 423 (154.0 bits), Expect = 9.2e-103, Sum P(3) = 9.2e-103
Identities = 113/289 (39%), Positives = 159/289 (55%)
Query: 838 LMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKST 897
+ N ++Q R CN P N +++ S I L SGK LLDR++P L +
Sbjct: 589 MQNPVMQARLACNSP---HNFYWPWAEDP--SSI--DETLVTASGKMLLLDRLIPCLLNK 641
Query: 898 GHRVLLFCQMTQLMNILEDYFSY-RGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVL 956
GH++L+F Q ++IL+D+ ++ R + R+DG DR +K FN D +Y IF+L
Sbjct: 642 GHKILIFSQFKTQLDILQDWATHLRSWNCCRIDGAISQADRQAQIKAFNT-DKDYKIFLL 700
Query: 957 STRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERI 1016
STRAGG G+NL ADTVI+FDSDWNP QDLQAQDRAHRIGQ V V RL T +VE+ +
Sbjct: 701 STRAGGQGINLVAADTVILFDSDWNPQQDLQAQDRAHRIGQTKPVIVYRLATKGTVEQTL 760
Query: 1017 LAAARYKLNMDEKVIQAGMFDQ---KSTGSERH-QFLQTILHQDDEEDEEENAVP----D 1068
L A K ++ VIQ G F +ST S L+ L +D+ E E +A P
Sbjct: 761 LEKADSKRRLERLVIQKGKFKSLLSESTMSRDDVDELKRALGEDEFERFEASADPASILS 820
Query: 1069 DETVNQMLARSEEEFQTYQR-IDAERRKEQGKKSRLIEVSELPDWLIKE 1116
DE + + RSEE + ++ +D + GK + +E D L+ +
Sbjct: 821 DEDLRVLTDRSEEAYALAEKGLDVD-----GKAFKAVETKRDGDNLMDQ 864
Score = 52 (23.4 bits), Expect = 3.9e-36, Sum P(2) = 3.9e-36
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 66 EQGLEEDPRYQKLIEMKANRTEIKHAFT----SAQVQQLRFQ--IMAYRLLARNQP 115
EQGLEED ++ I+ ++ + EI+ A T ++ Q + Q +M RL A N P
Sbjct: 550 EQGLEEDLDIEESID-ESEQEEIERANTIKLAKREIAQKKMQNPVMQARL-ACNSP 603
Score = 48 (22.0 bits), Expect = 9.2e-103, Sum P(3) = 9.2e-103
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 266 TLETAVNVKAYKRTKRQGLKEARATEKLEKQQK 298
T E V + A K K+Q A +K E+QQK
Sbjct: 51 TSEVFVAIMAEKMKKQQEEARLEAAKKQEQQQK 83
Score = 38 (18.4 bits), Expect = 1.2e-63, Sum P(4) = 1.2e-63
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 1286 KDFKTLCRNAQIYNEELSLIHEDSVVL 1312
KD+K + + + ++L+ D+V+L
Sbjct: 693 KDYKIFLLSTRAGGQGINLVAADTVIL 719
Score = 38 (18.4 bits), Expect = 1.2e-63, Sum P(4) = 1.2e-63
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 1084 QTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEE 1131
QTY+ I ++R E K R +E ++ED +IE+ E+++EE
Sbjct: 532 QTYKDI-SDR--EFNSKLRKLEQG------LEEDLDIEESIDESEQEE 570
>ZFIN|ZDB-GENE-030131-6320 [details] [associations]
symbol:chd8 "chromodomain helicase DNA binding
protein 8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
ZFIN:ZDB-GENE-030131-6320 GO:GO:0005524 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 EMBL:AL928674 IPI:IPI00919855
UniGene:Dr.81397 PRIDE:B0R0I6 HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC
Uniprot:B0R0I6
Length = 2511
Score = 966 (345.1 bits), Expect = 1.1e-102, Sum P(4) = 1.1e-102
Identities = 229/608 (37%), Positives = 351/608 (57%)
Query: 554 NG-KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLII 612
NG +L+EYQ++G+ W++ + N N ILADEMGLGKTIQ+IAL++ + V PF+II
Sbjct: 843 NGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEMFSAG-VQSPFMII 901
Query: 613 VPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA-QMK-----------ASKFNVLL 660
PLST++NW EF W +N + Y GS R+ +Q +M A KF+ L+
Sbjct: 902 APLSTITNWEREFSNWT-DMNAIVYHGSLASRQMIQQYEMYCKDDKGHLIPGAYKFDALI 960
Query: 661 TTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNK 720
TT+E ++ D L ++ W+ ++IDE HR+KN +CKL L + H++LLTGTPLQN
Sbjct: 961 TTFEMILSDCPELREISWRCVVIDEAHRLKNRNCKLLDSLKMLEIE-HKVLLTGTPLQNT 1019
Query: 721 LPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLL 780
+ EL++LL+FL P+ F S F + F +L EE + ++L +L+P +L
Sbjct: 1020 VEELFSLLHFLEPAQFPSEIEFLREFG----------DLKTEEQV---QKLQSILKPMML 1066
Query: 781 RRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLM 839
RRLK++VE L K E II+ +++ +QK YR + + L+ G+ L+
Sbjct: 1067 RRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSFLSMGA----TQNSNVPNLL 1122
Query: 840 NTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPD-----LYRVSGKFELLDRILPKL 894
NT+++LRK CNHP++ EEK + PD L R +GK LLD++LP+L
Sbjct: 1123 NTMMELRKCCNHPYLITGAEEKIVSELREVYDPLAPDFHLQALVRSAGKLVLLDKLLPRL 1182
Query: 895 KSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIF 954
K+ GH+VL+F QM + ++ILEDY ++ + Y R+DG + R + +F+ PDS+ F+F
Sbjct: 1183 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1242
Query: 955 VLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEE 1014
+L TRAGGLG+NL ADT +IFDSDWNP DLQAQ R HRIGQ V+V RL+T NS E
Sbjct: 1243 LLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYER 1302
Query: 1015 RILAAARYKLNMDEKVIQAGMFDQKSTGSE-RHQFLQTILHQD------DEEDEEENAVP 1067
+L A KL +D V+Q+ +++S+ + + ++ +L + DE DE
Sbjct: 1303 EMLDKASLKLGLDRAVLQSMSGNKESSIQQFSKKEIEDLLRKGAYAAIMDENDEGSRFCE 1362
Query: 1068 DDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEA 1127
+D ++Q+L R T I++E + K+ + D + + E ++WA +A
Sbjct: 1363 ED--IDQILQRRA----TTITIESEGKGSTFSKASFVASENRTDIALDDPEFWQKWAKKA 1416
Query: 1128 KEEEKALH 1135
+ +L+
Sbjct: 1417 DIDMDSLN 1424
Score = 59 (25.8 bits), Expect = 1.1e-102, Sum P(4) = 1.1e-102
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 1108 ELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLKAI 1161
+LP+WL KE+ + E E E ++ + R+RK+V+ +LT E +K I
Sbjct: 2295 DLPNWL-KENPDYE---VEGDMLELLVNRTKRKRRRKRVEKGAALTGSERVKVI 2344
Score = 48 (22.0 bits), Expect = 1.1e-102, Sum P(4) = 1.1e-102
Identities = 21/73 (28%), Positives = 33/73 (45%)
Query: 78 LIEMKANRT--EIKHAFTSAQVQQ------LRFQIMAYRLLARNQPLTPQLAMGVQGKRM 129
L + KA +T + K QVQQ +FQ+++ A P Q++ G G+R+
Sbjct: 336 LAQAKAGQTGAQAKVLTIQLQVQQQPNQQGAKFQLVSGAANAGGSPQVVQISQGQGGQRL 395
Query: 130 EGVPSGPQMPPMS 142
VP + P S
Sbjct: 396 -AVPLKLLLQPQS 407
Score = 47 (21.6 bits), Expect = 1.1e-102, Sum P(4) = 1.1e-102
Identities = 13/54 (24%), Positives = 26/54 (48%)
Query: 284 LKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRL 337
LKE K+E+ +K+E+ + + ++ + + + EY NQ R +L
Sbjct: 799 LKEDVDEGKVEEFRKIESRQPRLKRTPRPAASAWKKLDESTEYKNGNQLREYQL 852
Score = 37 (18.1 bits), Expect = 1.2e-101, Sum P(4) = 1.2e-101
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 428 KQKLMDTDGKVTLDQDETSQLTDM 451
K+ D D K+T D+DE D+
Sbjct: 614 KKYTEDLDIKITDDEDELDADVDV 637
>UNIPROTKB|E1BCV0 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:DAAA02058849 EMBL:DAAA02058850
EMBL:DAAA02058851 IPI:IPI00710948 Ensembl:ENSBTAT00000007848
Uniprot:E1BCV0
Length = 816
Score = 592 (213.5 bits), Expect = 1.9e-102, Sum P(3) = 1.9e-102
Identities = 121/285 (42%), Positives = 176/285 (61%)
Query: 547 EQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVN 606
+Q G ++ YQ++G+EW+ L+ N +NGILADEMGLGKT+Q IA I LM ++ V
Sbjct: 191 QQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVP 249
Query: 607 GPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFN-----VLLT 661
GPFL+ PLSTL NW EF+R+ P + + Y G+ R+ L + K V++T
Sbjct: 250 GPFLVCGPLSTLPNWMAEFKRFTPEIPTMLYHGTQQERRILVKHIHERKGTLQIHPVVIT 309
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
++E ++D+ L +WKY+I+DEGHR+KN C+L L F A ++LLLTGTPLQN L
Sbjct: 310 SFEIAMRDRTTLQNCYWKYLIVDEGHRIKNMKCRLIRELKRFN-ADNKLLLTGTPLQNNL 368
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFN-APFATTGEKVELNEEETILIIRRLHKVLRPFLL 780
ELW+LLNFLLP +F + +FE WF+ + T E + E E ++ LH++L PFLL
Sbjct: 369 SELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQN-VLHMLHQILTPFLL 427
Query: 781 RRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGS 825
RRLK +V ++P K E ++ +S Q++ Y + + I GS
Sbjct: 428 RRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGS 472
Score = 471 (170.9 bits), Expect = 1.9e-102, Sum P(3) = 1.9e-102
Identities = 109/252 (43%), Positives = 154/252 (61%)
Query: 838 LMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKST 897
L N ++ LRK CNHP++ IE D V V +L SGKF +LDR+LP+LK+
Sbjct: 538 LQNIMMLLRKCCNHPYL---IEYPI-DPVTQEFKVD-EELVTNSGKFLILDRMLPELKTR 592
Query: 898 GHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLS 957
GH+VLLF QMT++++IL DY +R F + RLDG+ +R + FN D + FIF++S
Sbjct: 593 GHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNIHSFNT-DPDVFIFLVS 651
Query: 958 TRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERIL 1017
TRAGGLG+NL ADTVII+DSDWNP DLQAQDR HRIGQ V V RL+T N+++++I+
Sbjct: 652 TRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTRPVVVYRLVTANTIDQKIV 711
Query: 1018 AAARYKLNMDEKVIQAGMFDQKSTG-SERHQFLQT-----ILHQDDEEDEEENA---VPD 1068
A K +++ +I F +G ++ FL +L D E E + + V
Sbjct: 712 ERAAAKRKLEKLIIHKNHFKGGQSGLNQSKNFLDPKELMELLKSRDYEREVKGSREKVIS 771
Query: 1069 DETVNQMLARSE 1080
D+ + +L RS+
Sbjct: 772 DKDLELLLDRSD 783
Score = 45 (20.9 bits), Expect = 1.9e-102, Sum P(3) = 1.9e-102
Identities = 22/108 (20%), Positives = 44/108 (40%)
Query: 205 ERENRV-ALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLRAEVIACARR 263
E+ R+ A IE + L G + R +I R L+ L + + ++ +
Sbjct: 11 EKRTRLKAAEIENK-RNLKGKARMSWD---RESVDIRYRRLQHLLEKSNIYSKFLLTKME 66
Query: 264 DTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQE 311
LE + +R K++ LK + ++ ++ +KKR + E
Sbjct: 67 QQQLEEQKKKEKLER-KKESLKVTKDKNSIDASEENAVIKKKRGREDE 113
Score = 45 (20.9 bits), Expect = 9.3e-58, Sum P(3) = 9.3e-58
Identities = 9/29 (31%), Positives = 20/29 (68%)
Query: 1246 KLPSRKELPDYYEVIDRPMDIKKILGRIE 1274
K +RK + DY ++ D P +++K++ +I+
Sbjct: 487 KRRTRKSV-DYSKIDDFPNELEKLISQIQ 514
Score = 40 (19.1 bits), Expect = 3.1e-57, Sum P(3) = 3.1e-57
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 1278 YSSVDELQKDFKTLCRNAQIYNEELSLIHEDSVVLES 1314
YS +D+ + + L Q + I E SV +ES
Sbjct: 496 YSKIDDFPNELEKLISQIQPEVDRERTIVETSVPIES 532
Score = 37 (18.1 bits), Expect = 1.3e-101, Sum P(3) = 1.3e-101
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 61 IDSMKEQGLEEDPRYQKLIEMK 82
+ M++Q LEE + +KL K
Sbjct: 62 LTKMEQQQLEEQKKKEKLERKK 83
>UNIPROTKB|Q8TD26 [details] [associations]
symbol:CHD6 "Chromodomain-helicase-DNA-binding protein 6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0007399 "nervous system development" evidence=NAS] [GO:0003682
"chromatin binding" evidence=NAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0007399 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 CleanEx:HS_CHD5 EMBL:AY034072
EMBL:AL121674 EMBL:AL031669 EMBL:AL031667 EMBL:BC021907
EMBL:BC039860 EMBL:BC040016 EMBL:AF525085 EMBL:AB037756
EMBL:AK026022 IPI:IPI00220289 IPI:IPI00395823 IPI:IPI00513717
RefSeq:NP_115597.3 UniGene:Hs.740645 UniGene:Hs.741381 PDB:2EPB
PDBsum:2EPB ProteinModelPortal:Q8TD26 SMR:Q8TD26 IntAct:Q8TD26
MINT:MINT-1197235 STRING:Q8TD26 PhosphoSite:Q8TD26 DMDM:296439466
PaxDb:Q8TD26 PRIDE:Q8TD26 Ensembl:ENST00000373222
Ensembl:ENST00000373233 Ensembl:ENST00000440647 GeneID:84181
KEGG:hsa:84181 UCSC:uc002xka.1 UCSC:uc002xkc.3 CTD:84181
GeneCards:GC20M040030 H-InvDB:HIX0015824 H-InvDB:HIX0027712
HGNC:HGNC:19057 neXtProt:NX_Q8TD26 PharmGKB:PA134974700
HOVERGEN:HBG081150 InParanoid:Q8TD26 KO:K14436 OMA:CKWATME
OrthoDB:EOG4NP72J PhylomeDB:Q8TD26 ChiTaRS:CHD6
EvolutionaryTrace:Q8TD26 GenomeRNAi:84181 NextBio:73559
ArrayExpress:Q8TD26 Bgee:Q8TD26 CleanEx:HS_CHD6
Genevestigator:Q8TD26 GermOnline:ENSG00000124177 Uniprot:Q8TD26
Length = 2715
Score = 994 (355.0 bits), Expect = 4.6e-102, Sum P(3) = 4.6e-102
Identities = 241/638 (37%), Positives = 358/638 (56%)
Query: 554 NGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIV 613
+ +L+EYQ++G+ W++ + N N ILADEMGLGKTIQ+I ++ + + ++GPFLII
Sbjct: 458 SNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIF-LRGIHGPFLIIA 516
Query: 614 PLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ--------AQMK----ASKFNVLLT 661
PLST++NW EF W +N + Y GS R+ +Q AQ KF+V++T
Sbjct: 517 PLSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVIT 575
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
T+E ++ D L K+HW +IIDE HR+KN +CKL L + H++LLTGTPLQN +
Sbjct: 576 TFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALE-HKVLLTGTPLQNSV 634
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 781
EL++LLNFL PS F S + F + F +L EE + ++L +L+P +LR
Sbjct: 635 EELFSLLNFLEPSQFPSETAFLEEFG----------DLKTEEQV---KKLQSILKPMMLR 681
Query: 782 RLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMN 840
RLK +VE L K E II+ +++ +QK YR + K LT G+ L+N
Sbjct: 682 RLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHNMPN-----LIN 736
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPD-----LYRVSGKFELLDRILPKLK 895
T+++LRK CNHP++ EEK + + PD + + +GK L+D++LPKL
Sbjct: 737 TMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLI 796
Query: 896 STGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
+ GH+VL+F QM + ++ILEDY R + Y R+DG + R + +F PDS+ F+F+
Sbjct: 797 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 856
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+T NS E
Sbjct: 857 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYERE 916
Query: 1016 ILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQT--ILHQD------DEEDEEENAVP 1067
+ A KL +D+ V+Q + G ++ ++ +L + DEEDE
Sbjct: 917 MFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCE 976
Query: 1068 DDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWA--- 1124
+D ++Q+L R I +E + K+ + D + + ++WA
Sbjct: 977 ED--IDQILQRRTHTIT----IQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIA 1030
Query: 1125 ---FEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLK 1159
EAK E+++L + R R RKQ + +S E E ++
Sbjct: 1031 ELDTEAKNEKESLVIDR-PRVRKQTKHYNSFEEDELME 1067
Score = 55 (24.4 bits), Expect = 4.6e-102, Sum P(3) = 4.6e-102
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 63 SMKEQGLEEDPRY-QKLIEMKANRTEIKHAFT 93
+M+E LE+DPR QK+ + + ++KH FT
Sbjct: 334 TMEE--LEKDPRIAQKIKRFRNKQAQMKHIFT 363
Score = 42 (19.8 bits), Expect = 4.6e-102, Sum P(3) = 4.6e-102
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 1103 LIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQV 1146
L+E L LI ++ E + EE+ L M G +R +V
Sbjct: 1847 LLENKSLESKLILSQNHSDEEEEEEENEEENLAMAVGMGERPEV 1890
Score = 41 (19.5 bits), Expect = 1.4e-100, Sum P(3) = 1.4e-100
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 275 AYKRTKRQGLKEARATEKLE-KQQKVEAERKKRQKHQE 311
A K +K + K R E E K+ + E KK ++H+E
Sbjct: 107 AAKGSKDREPKPKRKREPKEPKEPRKAKEPKKAKEHKE 144
Score = 40 (19.1 bits), Expect = 7.4e-102, Sum P(3) = 7.4e-102
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 1268 KILGRIEDGKYSSVDELQKDFKTLCRN 1294
+I+ R++ S+++ F +CRN
Sbjct: 1482 RIISRLDKKSDESLEQYFYSFVAMCRN 1508
Score = 39 (18.8 bits), Expect = 2.2e-100, Sum P(3) = 2.2e-100
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 289 ATEKLEKQQKVEAERKKRQKHQE 311
+TE + Q++ + KR+K+ E
Sbjct: 227 STESTDSQKRRSGRQVKRRKYNE 249
Score = 38 (18.4 bits), Expect = 2.8e-100, Sum P(3) = 2.8e-100
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 262 RRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAE 302
+R T ++A K+ K +K QG +K +++ + E
Sbjct: 169 KRSCT-DSAARTKSRKASKEQGPTPVEKKKKGKRKSETTVE 208
>UNIPROTKB|F1PTH3 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 Ensembl:ENSCAFT00000014716
Uniprot:F1PTH3
Length = 2715
Score = 996 (355.7 bits), Expect = 7.4e-102, Sum P(3) = 7.4e-102
Identities = 241/638 (37%), Positives = 358/638 (56%)
Query: 554 NGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIV 613
+ +L+EYQ++G+ W++ + N N ILADEMGLGKTIQ+I ++ + + ++GPFLII
Sbjct: 458 SNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIF-LRGIHGPFLIIA 516
Query: 614 PLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ--------AQMK----ASKFNVLLT 661
PLST++NW EF W +N + Y GS R+ +Q AQ KF+V++T
Sbjct: 517 PLSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVIT 575
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
T+E ++ D L K+HW +IIDE HR+KN +CKL L + H++LLTGTPLQN +
Sbjct: 576 TFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALE-HKVLLTGTPLQNSV 634
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 781
EL++LLNFL PS F S + F + F +L EE + ++L +L+P +LR
Sbjct: 635 EELFSLLNFLEPSQFPSETAFLEEFG----------DLKTEEQV---KKLQSILKPMMLR 681
Query: 782 RLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMN 840
RLK +VE L K E II+ +++ +QK YR + K LT G+ L+N
Sbjct: 682 RLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHNMPN-----LIN 736
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPD-----LYRVSGKFELLDRILPKLK 895
T+++LRK CNHP++ EEK + + PD + + +GK L+D++LPKL
Sbjct: 737 TMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLI 796
Query: 896 STGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
+ GH+VL+F QM + ++ILEDY R + Y R+DG + R + +F PDS+ F+F+
Sbjct: 797 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 856
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+T NS E
Sbjct: 857 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYERE 916
Query: 1016 ILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQT--ILHQD------DEEDEEENAVP 1067
+ A KL +D+ V+Q + G ++ ++ +L + DEEDE
Sbjct: 917 MFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCE 976
Query: 1068 DDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWA--- 1124
+D ++Q+L R I +E + K+ + D + + ++WA
Sbjct: 977 ED--IDQILQRRTHTIT----IQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIA 1030
Query: 1125 ---FEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLK 1159
EAK E+++L + R R RKQ + +S E E ++
Sbjct: 1031 ELDTEAKNEKESLVIDR-PRVRKQTKHYNSFEEDELME 1067
Score = 55 (24.4 bits), Expect = 7.4e-102, Sum P(3) = 7.4e-102
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 63 SMKEQGLEEDPRY-QKLIEMKANRTEIKHAFT 93
+M+E LE+DPR QK+ + + ++KH FT
Sbjct: 334 TMEE--LEKDPRIAQKIKRFRNKQAQMKHIFT 363
Score = 45 (20.9 bits), Expect = 8.3e-101, Sum P(3) = 8.3e-101
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 278 RTKRQGLKEARATE--KLEKQQ-KVEAERKKRQKHQEYITTV 316
+ KR G A T+ K K+Q ERKK+ K + TTV
Sbjct: 167 KEKRSGADTAARTKSKKASKEQGPTPVERKKKGKRKSE-TTV 207
Score = 41 (19.5 bits), Expect = 2.2e-100, Sum P(3) = 2.2e-100
Identities = 11/50 (22%), Positives = 26/50 (52%)
Query: 262 RRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQE 311
+ +TT+E+ + + + +E+ TE + Q++ + KR+K+ E
Sbjct: 202 KSETTVESLELDQGLPNSSLRSPEES--TESADSQKRRSGRQVKRRKYNE 249
Score = 40 (19.1 bits), Expect = 2.8e-100, Sum P(3) = 2.8e-100
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 268 ETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAE 302
+TA K+ K +K QG +K +++ + E
Sbjct: 174 DTAARTKSKKASKEQGPTPVERKKKGKRKSETTVE 208
Score = 38 (18.4 bits), Expect = 7.4e-102, Sum P(3) = 7.4e-102
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 1268 KILGRIEDGKYSSVDELQKDFKTLCRN 1294
+I+ R++ S++ F +CRN
Sbjct: 1482 RIISRLDKKSDESLEHYFYSFVAMCRN 1508
>UNIPROTKB|J9P0F6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 CTD:84181 KO:K14436 GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 RefSeq:XP_534421.3
Ensembl:ENSCAFT00000048852 GeneID:477230 KEGG:cfa:477230
Uniprot:J9P0F6
Length = 2715
Score = 996 (355.7 bits), Expect = 7.4e-102, Sum P(3) = 7.4e-102
Identities = 241/638 (37%), Positives = 358/638 (56%)
Query: 554 NGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIV 613
+ +L+EYQ++G+ W++ + N N ILADEMGLGKTIQ+I ++ + + ++GPFLII
Sbjct: 458 SNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIF-LRGIHGPFLIIA 516
Query: 614 PLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ--------AQMK----ASKFNVLLT 661
PLST++NW EF W +N + Y GS R+ +Q AQ KF+V++T
Sbjct: 517 PLSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVIT 575
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
T+E ++ D L K+HW +IIDE HR+KN +CKL L + H++LLTGTPLQN +
Sbjct: 576 TFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALE-HKVLLTGTPLQNSV 634
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 781
EL++LLNFL PS F S + F + F +L EE + ++L +L+P +LR
Sbjct: 635 EELFSLLNFLEPSQFPSETAFLEEFG----------DLKTEEQV---KKLQSILKPMMLR 681
Query: 782 RLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMN 840
RLK +VE L K E II+ +++ +QK YR + K LT G+ L+N
Sbjct: 682 RLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHNMPN-----LIN 736
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPD-----LYRVSGKFELLDRILPKLK 895
T+++LRK CNHP++ EEK + + PD + + +GK L+D++LPKL
Sbjct: 737 TMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLI 796
Query: 896 STGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
+ GH+VL+F QM + ++ILEDY R + Y R+DG + R + +F PDS+ F+F+
Sbjct: 797 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 856
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+T NS E
Sbjct: 857 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYERE 916
Query: 1016 ILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQT--ILHQD------DEEDEEENAVP 1067
+ A KL +D+ V+Q + G ++ ++ +L + DEEDE
Sbjct: 917 MFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCE 976
Query: 1068 DDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWA--- 1124
+D ++Q+L R I +E + K+ + D + + ++WA
Sbjct: 977 ED--IDQILQRRTHTIT----IQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIA 1030
Query: 1125 ---FEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLK 1159
EAK E+++L + R R RKQ + +S E E ++
Sbjct: 1031 ELDTEAKNEKESLVIDR-PRVRKQTKHYNSFEEDELME 1067
Score = 55 (24.4 bits), Expect = 7.4e-102, Sum P(3) = 7.4e-102
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 63 SMKEQGLEEDPRY-QKLIEMKANRTEIKHAFT 93
+M+E LE+DPR QK+ + + ++KH FT
Sbjct: 334 TMEE--LEKDPRIAQKIKRFRNKQAQMKHIFT 363
Score = 45 (20.9 bits), Expect = 8.3e-101, Sum P(3) = 8.3e-101
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 278 RTKRQGLKEARATE--KLEKQQ-KVEAERKKRQKHQEYITTV 316
+ KR G A T+ K K+Q ERKK+ K + TTV
Sbjct: 167 KEKRSGADTAARTKSKKASKEQGPTPVERKKKGKRKSE-TTV 207
Score = 41 (19.5 bits), Expect = 2.2e-100, Sum P(3) = 2.2e-100
Identities = 11/50 (22%), Positives = 26/50 (52%)
Query: 262 RRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQE 311
+ +TT+E+ + + + +E+ TE + Q++ + KR+K+ E
Sbjct: 202 KSETTVESLELDQGLPNSSLRSPEES--TESADSQKRRSGRQVKRRKYNE 249
Score = 40 (19.1 bits), Expect = 2.8e-100, Sum P(3) = 2.8e-100
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 268 ETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAE 302
+TA K+ K +K QG +K +++ + E
Sbjct: 174 DTAARTKSKKASKEQGPTPVERKKKGKRKSETTVE 208
Score = 38 (18.4 bits), Expect = 7.4e-102, Sum P(3) = 7.4e-102
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 1268 KILGRIEDGKYSSVDELQKDFKTLCRN 1294
+I+ R++ S++ F +CRN
Sbjct: 1482 RIISRLDKKSDESLEHYFYSFVAMCRN 1508
>UNIPROTKB|F1SC64 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:CU468514
Ensembl:ENSSSCT00000011474 Uniprot:F1SC64
Length = 838
Score = 596 (214.9 bits), Expect = 1.0e-101, Sum P(3) = 1.0e-101
Identities = 123/285 (43%), Positives = 176/285 (61%)
Query: 547 EQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVN 606
+Q G ++ YQ++G+EW+ L+ N +NGILADEMGLGKT+Q IA I LM ++ V
Sbjct: 213 QQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVP 271
Query: 607 GPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFN-----VLLT 661
GPFL+ PLSTL NW EF+R+ P + + Y GS R+ L + K V++T
Sbjct: 272 GPFLVCGPLSTLPNWMAEFQRFTPEIPTMLYHGSQQERRKLVNHIHKRKGTLQIHPVVIT 331
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
++E ++D+ L +WKY+I+DEGHR+KN C+L L F A ++LLLTGTPLQN L
Sbjct: 332 SFEIAMRDRNVLQHCYWKYLIVDEGHRIKNMKCRLIRELKRFN-ADNKLLLTGTPLQNNL 390
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFN-APFATTGEKVELNEEETILIIRRLHKVLRPFLL 780
ELW+LLNFLLP +F + +FE WF+ + T E + E E ++ LH++L PFLL
Sbjct: 391 SELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQN-VLHMLHQILTPFLL 449
Query: 781 RRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGS 825
RRLK +V ++P K E ++ +S Q+V Y + + I GS
Sbjct: 450 RRLKSDVALEVPPKREVVVYAPLSKKQEVFYTAIVNRTITNMFGS 494
Score = 466 (169.1 bits), Expect = 1.0e-101, Sum P(3) = 1.0e-101
Identities = 108/252 (42%), Positives = 153/252 (60%)
Query: 838 LMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKST 897
L N ++ LRK CNHP++ IE D V + +L SGKF +LDR+LP+LK
Sbjct: 560 LQNIMMLLRKCCNHPYL---IEYPI-DPVTQEFKID-EELVTNSGKFLILDRMLPELKIR 614
Query: 898 GHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLS 957
GH+VLLF QMT++++IL DY +R F + RLDG+ +R + FN D + FIF++S
Sbjct: 615 GHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYTEREKNMHSFNT-DPDVFIFLVS 673
Query: 958 TRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERIL 1017
TRAGGLG+NL ADTVII+DSDWNP DLQAQDR HRIGQ V V RL+T N+++++I+
Sbjct: 674 TRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIV 733
Query: 1018 AAARYKLNMDEKVIQAGMFDQKSTG-SERHQFLQT-----ILHQDDEEDEEENA---VPD 1068
A K +++ +I F +G ++ FL +L D E E + + V
Sbjct: 734 ERAAAKRKLEKLIIHKNHFKGGQSGLNQSKNFLDPKELMELLKSRDYEREVKGSREKVIS 793
Query: 1069 DETVNQMLARSE 1080
D+ + +L RS+
Sbjct: 794 DKDLELLLDRSD 805
Score = 49 (22.3 bits), Expect = 1.0e-101, Sum P(3) = 1.0e-101
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 278 RTKRQGLKEARATEKLE-KQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIM 335
+ ++Q L+E + EKLE K++ ++ + K TV+ K +E N + +M
Sbjct: 85 KMEQQQLEEQKKKEKLERKKESLKVTKGKNSIDASEENTVVMRKKRGREDESYNISEVM 143
Score = 46 (21.3 bits), Expect = 1.2e-57, Sum P(3) = 1.2e-57
Identities = 9/29 (31%), Positives = 20/29 (68%)
Query: 1246 KLPSRKELPDYYEVIDRPMDIKKILGRIE 1274
K +RK + DY ++ D P +++K++ +I+
Sbjct: 509 KRRTRKSI-DYSKIDDFPNELEKLISQIQ 536
Score = 38 (18.4 bits), Expect = 1.5e-100, Sum P(3) = 1.5e-100
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 61 IDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQQLRFQIM 105
+ M++Q LEE + +KL E K ++ S + +M
Sbjct: 83 LTKMEQQQLEEQKKKEKL-ERKKESLKVTKGKNSIDASEENTVVM 126
>UNIPROTKB|Q9NRZ9 [details] [associations]
symbol:HELLS "Lymphoid-specific helicase" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=ISS] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISS]
[GO:0000775 "chromosome, centromeric region" evidence=ISS]
[GO:0046651 "lymphocyte proliferation" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
EMBL:CH471066 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 GO:GO:0006346 GO:GO:0046651 EMBL:AF155827
EMBL:AB102717 EMBL:AB102718 EMBL:AB102719 EMBL:AB102720
EMBL:AB102721 EMBL:AB102722 EMBL:AK314485 EMBL:AB113249
EMBL:BX538033 EMBL:AL138759 EMBL:BC015477 EMBL:BC029381
EMBL:BC030963 EMBL:BC031004 EMBL:AY007108 EMBL:AB074174
IPI:IPI00010590 IPI:IPI00807418 IPI:IPI00807455 IPI:IPI00807553
IPI:IPI00807574 IPI:IPI00807597 IPI:IPI00807667 IPI:IPI00807698
IPI:IPI00807726 RefSeq:NP_060533.2 UniGene:Hs.655830
ProteinModelPortal:Q9NRZ9 SMR:Q9NRZ9 IntAct:Q9NRZ9 STRING:Q9NRZ9
PhosphoSite:Q9NRZ9 DMDM:74761670 PaxDb:Q9NRZ9 PRIDE:Q9NRZ9
DNASU:3070 Ensembl:ENST00000348459 Ensembl:ENST00000394036
Ensembl:ENST00000394044 Ensembl:ENST00000394045 GeneID:3070
KEGG:hsa:3070 UCSC:uc001kjs.3 UCSC:uc009xul.3 UCSC:uc009xum.3
CTD:3070 GeneCards:GC10P096305 H-InvDB:HIX0017337 HGNC:HGNC:4861
HPA:CAB004491 MIM:603946 neXtProt:NX_Q9NRZ9 PharmGKB:PA35054
HOVERGEN:HBG060049 OrthoDB:EOG4SN1N4 PhylomeDB:Q9NRZ9 ChiTaRS:HELLS
GenomeRNAi:3070 NextBio:12147 ArrayExpress:Q9NRZ9 Bgee:Q9NRZ9
Genevestigator:Q9NRZ9 GermOnline:ENSG00000119969 Uniprot:Q9NRZ9
Length = 838
Score = 591 (213.1 bits), Expect = 1.2e-101, Sum P(3) = 1.2e-101
Identities = 121/285 (42%), Positives = 176/285 (61%)
Query: 547 EQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVN 606
+Q G ++ YQ++G+EW+ L+ N +NGILADEMGLGKT+Q IA I LM ++ V
Sbjct: 213 QQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVP 271
Query: 607 GPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFN-----VLLT 661
GPFL+ PLSTL NW EF+R+ P + + Y G+ R+ L + K V++T
Sbjct: 272 GPFLVCGPLSTLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNIYKRKGTLQIHPVVIT 331
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
++E ++D+ L +WKY+I+DEGHR+KN C+L L F A ++LLLTGTPLQN L
Sbjct: 332 SFEIAMRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFN-ADNKLLLTGTPLQNNL 390
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFN-APFATTGEKVELNEEETILIIRRLHKVLRPFLL 780
ELW+LLNFLLP +F + +FE WF+ + T E + E E ++ LH++L PFLL
Sbjct: 391 SELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQN-VLHMLHQILTPFLL 449
Query: 781 RRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGS 825
RRLK +V ++P K E ++ +S Q++ Y + + I GS
Sbjct: 450 RRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGS 494
Score = 460 (167.0 bits), Expect = 1.2e-101, Sum P(3) = 1.2e-101
Identities = 109/252 (43%), Positives = 150/252 (59%)
Query: 838 LMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKST 897
L N ++ LRK CNHP++ IE D V + +L SGKF +LDR+LP+LK
Sbjct: 560 LQNIMMLLRKCCNHPYL---IEYPI-DPVTQEFKID-EELVTNSGKFLILDRMLPELKKR 614
Query: 898 GHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLS 957
GH+VLLF QMT +++IL DY R F + RLDG+ +R + FN D E FIF++S
Sbjct: 615 GHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNT-DPEVFIFLVS 673
Query: 958 TRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERIL 1017
TRAGGLG+NL ADTVII+DSDWNP DLQAQDR HRIGQ V V RL+T N+++++I+
Sbjct: 674 TRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIV 733
Query: 1018 AAARYKLNMDEKVIQAGMFDQKSTGSERHQ-FLQT-----ILHQDDEEDEEENA---VPD 1068
A K +++ +I F +G + FL +L D E E + + V
Sbjct: 734 ERAAAKRKLEKLIIHKNHFKGGQSGLNLSKNFLDPKELMELLKSRDYEREIKGSREKVIS 793
Query: 1069 DETVNQMLARSE 1080
D+ + +L RS+
Sbjct: 794 DKDLELLLDRSD 805
Score = 62 (26.9 bits), Expect = 1.2e-101, Sum P(3) = 1.2e-101
Identities = 29/121 (23%), Positives = 50/121 (41%)
Query: 195 EGLDPLII----LQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQ 250
E LD +I L+E E A +ER + L + S E EI R L+ L +
Sbjct: 19 EQLDTAVITPAMLEEEEQLEAAGLERERKMLEKARMSWDRE----STEIRYRRLQHLLEK 74
Query: 251 RQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQ 310
+ ++ + LE + +R K++ LK + ++ ++ RKKR +
Sbjct: 75 SNIYSKFLLTKMEQQQLEEQKKKEKLER-KKESLKVKKGKNSIDASEEKPVMRKKRGRED 133
Query: 311 E 311
E
Sbjct: 134 E 134
Score = 43 (20.2 bits), Expect = 1.2e-99, Sum P(3) = 1.2e-99
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 61 IDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQQ 99
+ M++Q LEE + +KL E K ++K S +
Sbjct: 83 LTKMEQQQLEEQKKKEKL-ERKKESLKVKKGKNSIDASE 120
>ASPGD|ASPL0000047400 [details] [associations]
symbol:AN2285 species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0042766 "nucleosome
mobilization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0043486 "histone exchange" evidence=IEA] [GO:0006348 "chromatin
silencing at telomere" evidence=IEA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043618 "regulation of transcription from RNA
polymerase II promoter in response to stress" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001307 GO:GO:0006281
GO:GO:0006351 GO:GO:0016568 GO:GO:0004386 EMBL:AACD01000038
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_659889.1 ProteinModelPortal:Q5BAZ5
STRING:Q5BAZ5 EnsemblFungi:CADANIAT00008977 GeneID:2874790
KEGG:ani:AN2285.2 HOGENOM:HOG000048482 OMA:LYFQMTR
OrthoDB:EOG41G6C8 Uniprot:Q5BAZ5
Length = 1612
Score = 664 (238.8 bits), Expect = 1.5e-101, Sum P(3) = 1.5e-101
Identities = 134/328 (40%), Positives = 204/328 (62%)
Query: 543 EIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEK 602
+I Q ++L KLKEYQ+KGL W+V+L+ +NGILADEMGLGKTIQ+I+++ YL E
Sbjct: 785 DIEISQPTMLT-AKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAEV 843
Query: 603 KKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ--------AQMKAS 654
+ GPFL+I P STL NW E ++ P++ V+ Y G+ RK L+ K S
Sbjct: 844 HNIWGPFLVIAPASTLHNWQQEITKFVPNIKVLPYWGNAKDRKILRKFWDRKHITYTKES 903
Query: 655 KFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTG 714
+F+VL+T+Y+ V+ D K+ W+YMI+DE +K+ L F+ +RLLLTG
Sbjct: 904 EFHVLVTSYQLVVLDAQYFQKVKWQYMILDEAQAIKSSQSSRWKSLLGFHCR-NRLLLTG 962
Query: 715 TPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEK-VELNEEETILIIRRLHK 773
TP+QN + ELWALL+F++P++F S F +WF+ + + +LNE++ +RRLH
Sbjct: 963 TPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQ----LRRLHM 1018
Query: 774 VLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXX 833
+L+PF+LRR+KK V+ +L DKVE + CD++ Q+ LY ++ + ++ +
Sbjct: 1019 ILKPFMLRRVKKHVQQELGDKVEKDVFCDLTYRQRALYTNLRNRVSIMDLIEKAAVGDET 1078
Query: 834 XXXXLMNTIVQLRKLCNHPFMFQNIEEK 861
LMN ++Q RK+CNHP +F+ E K
Sbjct: 1079 DSTTLMNLVMQFRKVCNHPDLFERAETK 1106
Score = 420 (152.9 bits), Expect = 1.5e-101, Sum P(3) = 1.5e-101
Identities = 90/187 (48%), Positives = 122/187 (65%)
Query: 881 SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL 940
SGK LD +L +LK+ GHRVLL+ QMT++++++E+Y +YR +KY RLDG+TK EDR D
Sbjct: 1320 SGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDT 1379
Query: 941 LKKFNA-PDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKN 999
+ F PD F+F+LSTRAGGLG+NL ADTVI +DSDWNP D QA DRAHR+GQ
Sbjct: 1380 VADFQQRPD--IFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTR 1437
Query: 1000 EVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGM-----FDQKSTGSERHQFLQTILH 1054
+V V RL+T +++EERI A K + VI G F+ ++ S+ +
Sbjct: 1438 QVTVYRLITRSTIEERIRKRALQKEEVQRVVISGGAAGGVDFNTRNRDSKTKDIAMWLA- 1496
Query: 1055 QDDEEDE 1061
DDE+ E
Sbjct: 1497 -DDEQAE 1502
Score = 60 (26.2 bits), Expect = 1.5e-101, Sum P(3) = 1.5e-101
Identities = 25/87 (28%), Positives = 43/87 (49%)
Query: 227 STLPEHLRVKAEIELRALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKE 286
ST E+LR A++ + + +R ++ AR T+ ++ +KR +R+
Sbjct: 591 STRQENLRKTAQLASKQSRKWQ-ERTNKSMKDTQARAKRTMREMMSF--WKRNEREERDL 647
Query: 287 ARATEK--LEKQQKVEAERK-KRQKHQ 310
R EK LE ++ EAER+ RQK +
Sbjct: 648 RRLAEKQELESAKRAEAEREANRQKRK 674
Score = 45 (20.9 bits), Expect = 9.9e-100, Sum P(4) = 9.9e-100
Identities = 26/109 (23%), Positives = 48/109 (44%)
Query: 204 QERENRVALNIERRIE-ELNGSLTSTLPEH---LRVKAEIELRALKVLN-FQRQLRAEVI 258
QERE + +R ++ E S+ H L++ E +A ++ F+ A VI
Sbjct: 319 QERERYILKGKKRALDVERAESIRRKRRRHDYLLKLGKSFEKQANAGMDRFRYANEASVI 378
Query: 259 ACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQ 307
+ + + K +R +R+ T ++E Q+K+EAE K +
Sbjct: 379 SEVQAKEIQDEKERKKDMQRKRRR-----ENTVRMEMQKKLEAELKANE 422
Score = 43 (20.2 bits), Expect = 1.6e-99, Sum P(4) = 1.6e-99
Identities = 9/27 (33%), Positives = 20/27 (74%)
Query: 284 LKEARATE-KLEKQQKVEAERKKRQKH 309
+ E +A E + EK++K + +RK+R+++
Sbjct: 378 ISEVQAKEIQDEKERKKDMQRKRRREN 404
Score = 42 (19.8 bits), Expect = 9.9e-100, Sum P(4) = 9.9e-100
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 369 AEDEEGYRKLIDQKKDKRLAFLLSQTDEY 397
A+ E R+ QK+ +L FL+SQT+ Y
Sbjct: 659 AKRAEAEREANRQKR--KLNFLISQTELY 685
Score = 41 (19.5 bits), Expect = 2.6e-99, Sum P(4) = 2.6e-99
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 297 QKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKA 340
++ E+ R+KR++H +Y+ L+ K F++ R N+A
Sbjct: 336 ERAESIRRKRRRH-DYL---LKLGKSFEKQANAGMDRFRYANEA 375
Score = 37 (18.1 bits), Expect = 2.3e-61, Sum P(3) = 2.3e-61
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 1274 EDGKYSSVDELQKDFKTLCRNAQIYNEELSLI 1305
+ GK + +DEL ++ K +Y + +I
Sbjct: 1319 DSGKLAKLDELLRELKAGGHRVLLYFQMTRMI 1350
>UNIPROTKB|F1NVT7 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00818616
Ensembl:ENSGALT00000040615 ArrayExpress:F1NVT7 Uniprot:F1NVT7
Length = 1257
Score = 972 (347.2 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 237/638 (37%), Positives = 357/638 (55%)
Query: 554 NGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIV 613
+ +L+EYQ++G+ W++ + N N ILADEMGLGKTIQ+I ++ + ++GPFLII
Sbjct: 380 SNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIF-LMGIHGPFLIIA 438
Query: 614 PLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA-QMKAS-----------KFNVLLT 661
PLST++NW EF W +N + Y GS R+ +Q +M KF V++T
Sbjct: 439 PLSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVIT 497
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
T+E ++ D L K+ W+ ++IDE HR+KN +CKL L + H++LLTGTPLQN +
Sbjct: 498 TFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALE-HKVLLTGTPLQNSV 556
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 781
EL++LLNFL P F S + F + F +L EE + ++L +L+P +LR
Sbjct: 557 EELFSLLNFLEPQQFPSETAFLEEFG----------DLKTEEQV---KKLQSILKPMMLR 603
Query: 782 RLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMN 840
RLK +VE L K E II+ +++ +QK YR + K L+ G+ L+N
Sbjct: 604 RLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPN-----LIN 658
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPD-----LYRVSGKFELLDRILPKLK 895
T+++LRK CNHP++ EEK + + PD + + +GK L+D++LPKL
Sbjct: 659 TMMELRKCCNHPYLINGAEEKILEDFRKTHSPEAPDFQLQAMIQAAGKLVLIDKLLPKLI 718
Query: 896 STGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
+ GH+VL+F QM + ++ILEDY R + Y R+DG + R + +F PDS+ F+F+
Sbjct: 719 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 778
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+T NS E
Sbjct: 779 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYERE 838
Query: 1016 ILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQT--ILHQD------DEEDEEENAVP 1067
+ A KL +D+ V+Q + G ++ ++ +L + DEEDE
Sbjct: 839 MFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCE 898
Query: 1068 DDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWA--- 1124
+D ++Q+L R QT I +E + K+ + D + + ++WA
Sbjct: 899 ED--IDQILQRRT---QTIT-IQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIA 952
Query: 1125 ---FEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLK 1159
+AK E+++L + R R RKQ + +S E E ++
Sbjct: 953 ELDTDAKNEKESLVIDR-PRVRKQTKHYNSFEEDELME 989
Score = 54 (24.1 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 69 LEEDPRY-QKLIEMKANRTEIKHAFT 93
LE+DPR QK+ + + ++KH FT
Sbjct: 260 LEKDPRISQKIKRFRNKQAQMKHIFT 285
Score = 46 (21.3 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 268 ETAVNVKAYKRTKRQGLKEAR-ATE-KLEKQQKVEAERKKRQKHQE 311
+ AV VK +R + + KE + A E K +K+ K KK +K +E
Sbjct: 36 KAAVEVKPKRRREPKEPKEPKKAKEPKKQKEPKQREVTKKARKPRE 81
Score = 39 (18.8 bits), Expect = 6.7e-100, Sum P(2) = 6.7e-100
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 262 RRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA--ERKKRQKHQE 311
RR E KA + K++ K+ T+K K ++ +A E K R+ E
Sbjct: 45 RRREPKEPKEPKKAKEPKKQKEPKQREVTKKARKPREPKAPKEPKDRKSSSE 96
>UNIPROTKB|E2QW28 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:ETFYTAI
GeneTree:ENSGT00550000075106 EMBL:AAEX03015428
Ensembl:ENSCAFT00000012889 Uniprot:E2QW28
Length = 839
Score = 593 (213.8 bits), Expect = 5.8e-101, Sum P(3) = 5.8e-101
Identities = 118/271 (43%), Positives = 171/271 (63%)
Query: 547 EQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVN 606
+Q G ++ YQ++G+EW+ L+ N +NGILADEMGLGKT+Q IA I LM ++ V
Sbjct: 214 QQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVP 272
Query: 607 GPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFN-----VLLT 661
GPFL+ PLSTL NW EF+R+ P + + Y G+ R+ L + K V++T
Sbjct: 273 GPFLVCGPLSTLPNWMAEFQRFTPDIPTMLYHGTQQERRKLVKNIHKRKGTLQIHPVVIT 332
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
++E ++D+ L +WKY+I+DEGHR+KN C+L L F A ++LLLTGTPLQN L
Sbjct: 333 SFEIAMRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFN-ADNKLLLTGTPLQNNL 391
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFN-APFATTGEKVELNEEETILIIRRLHKVLRPFLL 780
ELW+LLNFLLP +F + +FE WF+ + T E + E E ++ LH++L PFLL
Sbjct: 392 SELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQN-VLHMLHQILTPFLL 450
Query: 781 RRLKKEVESQLPDKVEYIIKCDMSGLQKVLY 811
RRLK +V ++P K E ++ +S Q++ Y
Sbjct: 451 RRLKSDVALEVPPKREVVVYAPLSKKQEIFY 481
Score = 470 (170.5 bits), Expect = 5.8e-101, Sum P(3) = 5.8e-101
Identities = 108/252 (42%), Positives = 154/252 (61%)
Query: 838 LMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKST 897
L N ++ LRK CNHP++ IE D V + +L SGKF +LDR+LP+LK+
Sbjct: 561 LQNIMMLLRKCCNHPYL---IEYPI-DPVTQEFKID-EELVTNSGKFLILDRMLPELKAR 615
Query: 898 GHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLS 957
GH+VLLF QMT++++IL DY +R F + RLDG+ +R + FN D + FIF++S
Sbjct: 616 GHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNT-DPDVFIFLVS 674
Query: 958 TRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERIL 1017
TRAGGLG+NL ADTVII+DSDWNP DLQAQDR HRIGQ V V RL+T N+++++I+
Sbjct: 675 TRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIV 734
Query: 1018 AAARYKLNMDEKVIQAGMFDQKSTG-SERHQFLQT-----ILHQDDEEDEEENA---VPD 1068
A K +++ +I F +G ++ FL +L D E E + + V
Sbjct: 735 ERAAAKRKLEKLIIHKNHFKGGQSGLNQSKNFLDPKELMELLKSRDYEREVKGSREKVIS 794
Query: 1069 DETVNQMLARSE 1080
D+ + +L RS+
Sbjct: 795 DKDLELLLDRSD 806
Score = 43 (20.2 bits), Expect = 5.8e-101, Sum P(3) = 5.8e-101
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 278 RTKRQGLKEARATEKLE-KQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIM 335
+ ++Q L+E + EKLE K++ ++ + K V+ K +E N A +M
Sbjct: 85 KMEQQQLEEQKKKEKLERKKETLKVTKGKNSIGASEENPVVTRKKRGREDESYNIAEVM 143
Score = 37 (18.1 bits), Expect = 2.5e-100, Sum P(3) = 2.5e-100
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 61 IDSMKEQGLEEDPRYQKLIEMK 82
+ M++Q LEE + +KL K
Sbjct: 83 LTKMEQQQLEEQKKKEKLERKK 104
>UNIPROTKB|H3BTW3 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00384 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 EMBL:AC007906
EMBL:AC079416 HGNC:HGNC:25701 Ensembl:ENST00000565803 Bgee:H3BTW3
Uniprot:H3BTW3
Length = 1099
Score = 975 (348.3 bits), Expect = 5.9e-101, Sum P(2) = 5.9e-101
Identities = 233/620 (37%), Positives = 359/620 (57%)
Query: 547 EQASILVNG-KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKV 605
+Q+ NG +L+EYQ++GL W++ + N N ILADEMGLGKTIQ+I + Y + +
Sbjct: 375 DQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEILLTGI 433
Query: 606 NGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ--------AQMK----A 653
GPFLII PLST++NW EF W +NVV Y GS R+ +Q +Q + A
Sbjct: 434 RGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGA 492
Query: 654 SKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLT 713
+F ++TT+E ++ G L + W+ +IIDE HR+KN +CKL L + H++LLT
Sbjct: 493 YRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLE-HKVLLT 551
Query: 714 GTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHK 773
GTPLQN + EL++LL+FL P F S STF Q F +L EE + ++L
Sbjct: 552 GTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFG----------DLKTEEQV---QKLQA 598
Query: 774 VLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXX 832
+L+P +LRRLK++VE +L K E II+ +++ +QK YR + K L+ G+
Sbjct: 599 ILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGA-----GQ 653
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLY-----RVSGKFELL 887
L+NT+++LRK CNHP++ + EEK + + D + + +GK L+
Sbjct: 654 TNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLI 713
Query: 888 DRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAP 947
D++LPK+K+ GH+VL+F QM + ++ILEDY ++ + Y R+DG + R + +F+ P
Sbjct: 714 DKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKP 773
Query: 948 DSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLM 1007
DS+ F+F+L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+
Sbjct: 774 DSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLV 833
Query: 1008 TVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERH---QFLQTILHQDDE----ED 1060
T NS E + A KL +D+ V+Q+ + + G + + ++ +L + E+
Sbjct: 834 TRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEE 893
Query: 1061 EEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEI 1120
E+E + +E ++Q+L R + I++E R K+ + D + +
Sbjct: 894 EDEGSKFCEEDIDQILLRRTKTIT----IESEGRGSTFAKASFVASGNRTDISLDDPNFW 949
Query: 1121 EQWAFEAKEEEKALHMGRGS 1140
++WA +A+ + +A+ GR S
Sbjct: 950 QKWAKKAEIDIEAIS-GRNS 968
Score = 46 (21.3 bits), Expect = 5.9e-101, Sum P(2) = 5.9e-101
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 279 TKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIM 335
TK Q + +EK ++++KVE+E K++K I+ + K+ E N R+M
Sbjct: 24 TKLQNTQVRVMSEK-KQRKKVESE-SKQEKANRIISEAIAKAKERGE---RNIPRVM 75
Score = 46 (21.3 bits), Expect = 5.9e-101, Sum P(2) = 5.9e-101
Identities = 14/65 (21%), Positives = 31/65 (47%)
Query: 284 LKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQAR---IMRLNKA 340
LKE K+E+ ++++A R ++ + + + ++Y NQ R + LN
Sbjct: 338 LKEDVDLAKIEEFEQLQASRPDTRRLDRPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWL 397
Query: 341 VMNYH 345
+ N++
Sbjct: 398 LFNWY 402
Score = 41 (19.5 bits), Expect = 2.0e-100, Sum P(2) = 2.0e-100
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 245 KVLNFQRQLRAEVIACARRDTTLETAVNVKAYK------RTKRQGLKEARATEKLEKQQK 298
K+L+ R ++ E+ DT E V K Y T+ Q LK+ R +K+++ +
Sbjct: 220 KILS-SRTVKKEISPGVMIDTE-EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKL 277
Query: 299 VEAER 303
+A+R
Sbjct: 278 RQAQR 282
>RGD|1565642 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00384 SMART:SM00490 RGD:1565642
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0043234
GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 OrthoDB:EOG4B2SWB
IPI:IPI00778475 Ensembl:ENSRNOT00000054997 UCSC:RGD:1565642
ArrayExpress:D3ZWX7 Uniprot:D3ZWX7
Length = 3182
Score = 659 (237.0 bits), Expect = 2.6e-100, Sum P(3) = 2.6e-100
Identities = 138/322 (42%), Positives = 206/322 (63%)
Query: 535 YSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIA 594
Y++A T ++ T +L+ G+L+EYQ GL+W+V+++ LNGILADEMGLGKTIQTI+
Sbjct: 609 YTLATT--QVKTP-IPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 665
Query: 595 LITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTL-QAQMKA 653
L+ +L +K GP LIIVP S + NW +E +RW PS ++ Y G+ RK Q K
Sbjct: 666 LLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKP 725
Query: 654 SKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLT 713
+ F+V +T+Y+ V++D + +W+Y+I+DE +KN + L F + RLLLT
Sbjct: 726 NAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFN-SQRRLLLT 784
Query: 714 GTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHK 773
GTPLQN L ELW+L++FL+P +F+S F++WF+ P TG +E ++E +++RLHK
Sbjct: 785 GTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPL--TG-MIEGSQEYNEGLVKRLHK 841
Query: 774 VLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXX 833
VLRPFLLRR+K +VE Q+P K E++I+C +S Q+ LY + T E
Sbjct: 842 VLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQ----TTTKETLATGHF 897
Query: 834 XXXXLMNTIVQLRKLCNHPFMF 855
++N ++QLRK+CNHP +F
Sbjct: 898 MS--VINILMQLRKVCNHPNLF 917
Score = 445 (161.7 bits), Expect = 2.6e-100, Sum P(3) = 2.6e-100
Identities = 107/273 (39%), Positives = 158/273 (57%)
Query: 875 PDL----YRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDG 930
PDL Y +GK + L +L +LK+ GHRVL+F QMT+++++LE + +Y G Y+RLDG
Sbjct: 2020 PDLRLIQYDCAGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDG 2079
Query: 931 TTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQD 990
+T+ E R L+++FNA D F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQD
Sbjct: 2080 STRVEQRQALMERFNA-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQD 2138
Query: 991 RAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQ 1050
R HRIGQ +V + RL++ +VEE IL A K + + I+ G F +T + Q ++
Sbjct: 2139 RCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNF---TTAYFKQQTIR 2195
Query: 1051 TILHQDDEE----------DEEENAVPDDET--VNQMLARSEEEFQTYQRIDAERRKEQG 1098
+ EE +EEE V +T + Q L R+E+E R + + EQ
Sbjct: 2196 ELFDMPLEEPPGSSVSSVPEEEEETVASKQTHILEQALCRAEDEEDI--RAATQAKAEQ- 2252
Query: 1099 KKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEE 1131
+ L E +E + E EE + A++EE
Sbjct: 2253 -VAELAEFNENEGFPAGEGEEASRPGPGAEDEE 2284
Score = 43 (20.2 bits), Expect = 2.6e-100, Sum P(3) = 2.6e-100
Identities = 12/57 (21%), Positives = 28/57 (49%)
Query: 275 AYKRTKRQGL--KEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRN 329
A +R ++G+ K R + ++Q+ + ER +R++ + KD +++ N
Sbjct: 152 AQERRWKRGVARKVVRMVIRHHEEQRQKEERARREEQAKLRRIASTMAKDVRQFWSN 208
Score = 41 (19.5 bits), Expect = 4.2e-100, Sum P(3) = 4.2e-100
Identities = 17/96 (17%), Positives = 41/96 (42%)
Query: 219 EELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKR 278
EE+ L++ + R K + + ++++ + + + ARR+ + +
Sbjct: 142 EEMQW-LSADFAQERRWKRGVARKVVRMVIRHHEEQRQKEERARREEQAKLRRIASTMAK 200
Query: 279 TKRQGLKEARATEKLEKQQKVEAERKKR-QKHQEYI 313
RQ + ++Q ++E +RKK H ++I
Sbjct: 201 DVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFI 236
>UNIPROTKB|E1BC33 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0043234 "protein complex" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 OMA:LGTGNPQ
EMBL:DAAA02057908 IPI:IPI00705506 Ensembl:ENSBTAT00000018503
Uniprot:E1BC33
Length = 3242
Score = 659 (237.0 bits), Expect = 3.5e-100, Sum P(3) = 3.5e-100
Identities = 138/322 (42%), Positives = 206/322 (63%)
Query: 535 YSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIA 594
Y++A T ++ T +L+ G+L+EYQ GL+W+V+++ LNGILADEMGLGKTIQTI+
Sbjct: 607 YTLATT--QVKTP-IPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 663
Query: 595 LITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTL-QAQMKA 653
L+ +L +K GP LIIVP S + NW +E +RW PS ++ Y G+ RK Q K
Sbjct: 664 LLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKP 723
Query: 654 SKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLT 713
+ F+V +T+Y+ V++D + +W+Y+I+DE +KN + L F + RLLLT
Sbjct: 724 NAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFN-SQRRLLLT 782
Query: 714 GTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHK 773
GTPLQN L ELW+L++FL+P +F+S F++WF+ P TG +E ++E +++RLHK
Sbjct: 783 GTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPL--TG-MIEGSQEYNEGLVKRLHK 839
Query: 774 VLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXX 833
VLRPFLLRR+K +VE Q+P K E++I+C +S Q+ LY + T E
Sbjct: 840 VLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQ----TTTKETLATGHF 895
Query: 834 XXXXLMNTIVQLRKLCNHPFMF 855
++N ++QLRK+CNHP +F
Sbjct: 896 MS--VINILMQLRKVCNHPNLF 915
Score = 442 (160.7 bits), Expect = 3.5e-100, Sum P(3) = 3.5e-100
Identities = 106/274 (38%), Positives = 157/274 (57%)
Query: 875 PDLYRVS---GKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGT 931
PDL + GK + L +L +LK+ GHRVL+F QMT+++++LE + +Y G Y+RLDG+
Sbjct: 2044 PDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGS 2103
Query: 932 TKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDR 991
T+ E R L+++FNA D F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR
Sbjct: 2104 TRVEQRQALMERFNA-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDR 2162
Query: 992 AHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQT 1051
HRIGQ +V + RL++ +VEE IL A K + + I+ G F +T + Q ++
Sbjct: 2163 CHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNF---TTAYFKQQTIRE 2219
Query: 1052 ILHQDDEE----------DEEENAVPDDET--VNQMLARSEEEFQTYQRIDAERRKEQGK 1099
+ EE D+EE V +T + Q L R+E+E R + + EQ
Sbjct: 2220 LFDMPLEEPSGSSVPSAPDDEEETVASKQTHILEQALCRAEDEEDI--RAATQAKAEQ-- 2275
Query: 1100 KSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKA 1133
+ L E +E + E EE + E +E +A
Sbjct: 2276 VAELAEFNENDGFTAGEGEEAGRPGAEDEEMSRA 2309
Score = 45 (20.9 bits), Expect = 3.5e-100, Sum P(3) = 3.5e-100
Identities = 18/96 (18%), Positives = 42/96 (43%)
Query: 219 EELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKR 278
EE+ L++ + R K + + ++++ + + + ARR+ + A +
Sbjct: 142 EEMQW-LSADFAQERRWKRGVARKVVRMVIRHHEEQRQKEERARREEQAKLRRIASAMAK 200
Query: 279 TKRQGLKEARATEKLEKQQKVEAERKKR-QKHQEYI 313
RQ + ++Q ++E +RKK H ++I
Sbjct: 201 DVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFI 236
Score = 43 (20.2 bits), Expect = 5.7e-100, Sum P(3) = 5.7e-100
Identities = 12/57 (21%), Positives = 28/57 (49%)
Query: 275 AYKRTKRQGL--KEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRN 329
A +R ++G+ K R + ++Q+ + ER +R++ + KD +++ N
Sbjct: 152 AQERRWKRGVARKVVRMVIRHHEEQRQKEERARREEQAKLRRIASAMAKDVRQFWSN 208
Score = 37 (18.1 bits), Expect = 2.5e-99, Sum P(3) = 2.5e-99
Identities = 22/97 (22%), Positives = 37/97 (38%)
Query: 302 ERK-KRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXX 360
ER+ KR ++ + V++H E R + R R +A + A+A
Sbjct: 154 ERRWKRGVARKVVRMVIRH----HEEQRQKEERARREEQAKLRRIASAMAKDVRQFWSNV 209
Query: 361 XXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEY 397
E RK + D L F++ QT++Y
Sbjct: 210 EKVVQFKQQSRLEEKRK---KALDLHLDFIVGQTEKY 243
>UNIPROTKB|F1RT88 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:CU179734
Ensembl:ENSSSCT00000006828 Uniprot:F1RT88
Length = 2991
Score = 971 (346.9 bits), Expect = 6.3e-100, Sum P(4) = 6.3e-100
Identities = 224/555 (40%), Positives = 327/555 (58%)
Query: 554 NGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIV 613
N KL+EYQ++G+ W++ + N N ILADEMGLGKTIQ+I + Y + K ++GPFL+I
Sbjct: 958 NNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIA 1016
Query: 614 PLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQ-----------MKAS-KFNVLLT 661
PLST+ NW EF W +NVV Y GS R+T+Q +K S KF+ ++T
Sbjct: 1017 PLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 1075
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
T+E ++ D L + W+ ++IDE HR+KN +CKL L + H++LLTGTPLQN +
Sbjct: 1076 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLE-HKVLLTGTPLQNTV 1134
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 781
EL++LL+FL PS F S +TF Q F +L EE + ++L +L+P +LR
Sbjct: 1135 EELFSLLHFLEPSRFPSETTFMQEFG----------DLKTEEQV---QKLQAILKPMMLR 1181
Query: 782 RLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMN 840
RLK++VE L K E II+ +++ +QK YR + K L+ G L+N
Sbjct: 1182 RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGG-----GQANVPNLLN 1236
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPD-----LYRVSGKFELLDRILPKLK 895
T+++LRK CNHP++ EEK + + PD + + +GK L+D++LPKLK
Sbjct: 1237 TMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLK 1296
Query: 896 STGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
+ GHRVL+F QM + ++ILEDY R + Y R+DG + R + +F+ PDS+ F+F+
Sbjct: 1297 AGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1356
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQ--DLQAQDRAHRIGQKNEVRVLRLMTVNSVE 1013
L TRAGGLG+NL ADT IIFDSDWNP QAQ R HRIGQ V++ RL+T NS E
Sbjct: 1357 LCTRAGGLGINLTAADTCIIFDSDWNPKMISSFQAQARCHRIGQSKSVKIYRLITRNSYE 1416
Query: 1014 ERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQF----LQTILHQD------DEEDEEE 1063
+ A KL +D+ V+Q+ M +++ + Q ++ +L + DEEDE
Sbjct: 1417 REMFDKASLKLGLDKAVLQS-MSGRENAPNGVQQLSKKEIEDLLRKGAYGALMDEEDEGS 1475
Query: 1064 NAVPDDETVNQMLAR 1078
+D ++Q+L R
Sbjct: 1476 KFCEED--IDQILLR 1488
Score = 45 (20.9 bits), Expect = 6.3e-100, Sum P(4) = 6.3e-100
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 1114 IKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQ 1145
+KEDE +E E+ EEK R + R Q
Sbjct: 1570 VKEDELMEFSDLESDSEEKPCAKPRRPQDRSQ 1601
Score = 45 (20.9 bits), Expect = 1.5e-98, Sum P(3) = 1.5e-98
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 1050 QTILHQDDEEDEEENAVPDDET 1071
++I + EEDEEE DD++
Sbjct: 2224 KSISEKGSEEDEEEKLEDDDKS 2245
Score = 44 (20.5 bits), Expect = 6.3e-100, Sum P(4) = 6.3e-100
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 281 RQGLKEARATEKLEK--QQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRL 337
RQ + +A+ E+ EK ++ E ER +R ++ + + +EY NN+ R +L
Sbjct: 914 RQDIDQAKI-EEFEKLMSREPETERVERPPADDW-----KKSESSREYKNNNKLREYQL 966
Score = 41 (19.5 bits), Expect = 4.0e-98, Sum P(3) = 4.0e-98
Identities = 13/56 (23%), Positives = 28/56 (50%)
Query: 1092 ERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVD 1147
E+ +GK E +E P+ +K++EE + + + K+ ++ G + K V+
Sbjct: 2167 EKTAAEGKA----EEAERPE--VKDEEEEAEGSGKDKKRDREAEAGAARNEPKGVE 2216
Score = 39 (18.8 bits), Expect = 6.3e-100, Sum P(4) = 6.3e-100
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 1273 IEDGKYSSVDELQKDFKTLCRNAQIY 1298
+ G+Y ++D +T+CR +Y
Sbjct: 1627 LSHGRYKR-QLTEQDVETICRTILVY 1651
>POMBASE|SPAC11E3.01c [details] [associations]
symbol:swr1 "SNF2 family helicase Swr1" species:4896
"Schizosaccharomyces pombe" [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISM] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IPI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043486 "histone exchange" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC11E3.01c GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0000812 GO:GO:0004003 GO:GO:0043486
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 PROSITE:PS51204 KO:K11681 HOGENOM:HOG000186095
OrthoDB:EOG49S9FK PIR:T37528 RefSeq:XP_001713118.1
ProteinModelPortal:O13682 STRING:O13682 EnsemblFungi:SPAC11E3.01c.1
GeneID:3361561 KEGG:spo:SPAC11E3.01c OMA:VKNEREG NextBio:20811602
Uniprot:O13682
Length = 1288
Score = 638 (229.6 bits), Expect = 1.0e-99, Sum P(3) = 1.0e-99
Identities = 133/313 (42%), Positives = 189/313 (60%)
Query: 548 QASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNG 607
Q L G L+EYQ GLEW+ +L ++N NGILADEMGLGKTIQTIAL+ +L +K+ G
Sbjct: 438 QVPFLFRGTLREYQQYGLEWLTALHDSNTNGILADEMGLGKTIQTIALLAHLACEKENWG 497
Query: 608 PFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQM-KASKFNVLLTTYEYV 666
P LIIVP S + NW +EF+++ P ++ Y G+P RK ++ K ++V +T+Y+ V
Sbjct: 498 PHLIIVPTSVMLNWEMEFKKFLPGFKILTYYGNPQERKEKRSGWYKPDTWHVCITSYQLV 557
Query: 667 IKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWA 726
++D P + W+YMI+DE H +KN + L F A HRLLLTGTPLQN L ELW+
Sbjct: 558 LQDHQPFRRKKWQYMILDEAHNIKNFRSQRWQSLLNFN-AEHRLLLTGTPLQNNLVELWS 616
Query: 727 LLNFLLP-------SIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFL 779
LL FL+P S F ++ F+ WF+ P E+ + E + + +LH+VLRP+L
Sbjct: 617 LLYFLMPAGVTQNNSAFANLKDFQDWFSKPMDRLIEEGQDMNPEAMNTVAKLHRVLRPYL 676
Query: 780 LRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLM 839
LRRLK EVE Q+P K E+++ C +S Q+ LY + ++
Sbjct: 677 LRRLKTEVEKQMPAKYEHVVYCQLSKRQRFLYDDF------INRARTREILASGNFMSII 730
Query: 840 NTIVQLRKLCNHP 852
N ++QLRK+CNHP
Sbjct: 731 NCLMQLRKVCNHP 743
Score = 434 (157.8 bits), Expect = 1.0e-99, Sum P(3) = 1.0e-99
Identities = 98/242 (40%), Positives = 145/242 (59%)
Query: 882 GKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLL 941
GK ++LDR+L L S GHRVL+F QMT++++ILE + + G +Y+RLDG TK E R L
Sbjct: 991 GKLQVLDRLLKDLVSNGHRVLIFTQMTKVLDILEQFLNIHGHRYLRLDGATKIEQRQILT 1050
Query: 942 KKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 1001
++FN D + +F+LSTR+GGLG+NL ADTVI +DSDWNP D QAQDR+HRIGQ +V
Sbjct: 1051 ERFNN-DDKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPQLDAQAQDRSHRIGQTRDV 1109
Query: 1002 RVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE-- 1059
+ RL++ +VE +L A K +D+ VIQ G F +T R + + DDE
Sbjct: 1110 HIYRLISEYTVESNMLRRANQKRMLDKIVIQGGEF---TTEWFRKADVLDLFDLDDESLK 1166
Query: 1060 ----DEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIK 1115
D + + ++E LA +E+E + Q R++ +++ E S P ++
Sbjct: 1167 KVKADSDSGSTKNEENWEVALAAAEDE-EDVQAAQVARKESALEQTEFSETST-PQAMLT 1224
Query: 1116 ED 1117
+D
Sbjct: 1225 KD 1226
Score = 50 (22.7 bits), Expect = 1.0e-99, Sum P(3) = 1.0e-99
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 277 KRTKRQGLKEARATEKLEKQQKVE-AERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIM 335
KRT + K+ + E+ ++++ E A +R +E + +L+H D E ARI
Sbjct: 177 KRTAWEIRKKWKVIEREVRRRRAERAAEAQRVAGKEQLANILKHSTDLLE------ARIE 230
Query: 336 RLN 338
R N
Sbjct: 231 RAN 233
Score = 47 (21.6 bits), Expect = 4.1e-59, Sum P(3) = 4.1e-59
Identities = 19/98 (19%), Positives = 41/98 (41%)
Query: 1027 DEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTY 1086
DE+ +QA +K + E+ +F +T Q + D T +EE+ T
Sbjct: 1192 DEEDVQAAQVARKESALEQTEFSETSTPQAMLTKDSTPLSSDSATPGFERDSTEEQSNTN 1251
Query: 1087 QRIDAERRK-EQGKKSRLIEVSELPDWLIKEDEEIEQW 1123
+D +R + E+ + + E ++++ ++W
Sbjct: 1252 D-MDEDRSELEEDLDETVGHIDEYMISFLEQEGTSDEW 1288
>UNIPROTKB|Q6ZRS2 [details] [associations]
symbol:SRCAP "Helicase SRCAP" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0004402 "histone
acetyltransferase activity" evidence=TAS] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0016573 "histone acetylation" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0019048 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0006357 GO:GO:0006351 GO:GO:0003713
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC106886 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 GO:GO:0004402
EMBL:AC093249 EMBL:AK128030 EMBL:AB002307 EMBL:BC159099
EMBL:AF143946 IPI:IPI00009101 IPI:IPI00444046 IPI:IPI00550342
RefSeq:NP_006653.2 UniGene:Hs.647334 ProteinModelPortal:Q6ZRS2
SMR:Q6ZRS2 IntAct:Q6ZRS2 MINT:MINT-123408 STRING:Q6ZRS2
PhosphoSite:Q6ZRS2 DMDM:296452947 PaxDb:Q6ZRS2 PRIDE:Q6ZRS2
DNASU:10847 Ensembl:ENST00000262518 Ensembl:ENST00000344771
Ensembl:ENST00000380361 Ensembl:ENST00000395059 GeneID:10847
KEGG:hsa:10847 UCSC:uc002dze.1 UCSC:uc002dzg.1 CTD:10847
GeneCards:GC16P030710 H-InvDB:HIX0012970 HGNC:HGNC:16974
HPA:HPA028929 MIM:136140 MIM:611421 neXtProt:NX_Q6ZRS2
Orphanet:2044 PharmGKB:PA162404706 HOGENOM:HOG000168717
InParanoid:Q6ZRS2 KO:K11661 OMA:LGTGNPQ OrthoDB:EOG4B2SWB
ChiTaRS:SRCAP GenomeRNAi:10847 NextBio:41182 ArrayExpress:Q6ZRS2
Bgee:Q6ZRS2 CleanEx:HS_SRCAP Genevestigator:Q6ZRS2 Uniprot:Q6ZRS2
Length = 3230
Score = 659 (237.0 bits), Expect = 1.2e-99, Sum P(3) = 1.2e-99
Identities = 138/322 (42%), Positives = 206/322 (63%)
Query: 535 YSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIA 594
Y++A T ++ T +L+ G+L+EYQ GL+W+V+++ LNGILADEMGLGKTIQTI+
Sbjct: 599 YTLATT--QVKTP-IPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 655
Query: 595 LITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTL-QAQMKA 653
L+ +L +K GP LIIVP S + NW +E +RW PS ++ Y G+ RK Q K
Sbjct: 656 LLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKP 715
Query: 654 SKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLT 713
+ F+V +T+Y+ V++D + +W+Y+I+DE +KN + L F + RLLLT
Sbjct: 716 NAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFN-SQRRLLLT 774
Query: 714 GTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHK 773
GTPLQN L ELW+L++FL+P +F+S F++WF+ P TG +E ++E +++RLHK
Sbjct: 775 GTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPL--TG-MIEGSQEYNEGLVKRLHK 831
Query: 774 VLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXX 833
VLRPFLLRR+K +VE Q+P K E++I+C +S Q+ LY + T E
Sbjct: 832 VLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQ----TTTKETLATGHF 887
Query: 834 XXXXLMNTIVQLRKLCNHPFMF 855
++N ++QLRK+CNHP +F
Sbjct: 888 MS--VINILMQLRKVCNHPNLF 907
Score = 439 (159.6 bits), Expect = 1.2e-99, Sum P(3) = 1.2e-99
Identities = 106/274 (38%), Positives = 157/274 (57%)
Query: 875 PDLYRVS---GKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGT 931
PDL + GK + L +L +LK+ GHRVL+F QMT+++++LE + +Y G Y+RLDG+
Sbjct: 2033 PDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGS 2092
Query: 932 TKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDR 991
T+ E R L+++FNA D F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR
Sbjct: 2093 TRVEQRQALMERFNA-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDR 2151
Query: 992 AHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQT 1051
HRIGQ +V + RL++ +VEE IL A K + + I+ G F +T + Q ++
Sbjct: 2152 CHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNF---TTAYFKQQTIRE 2208
Query: 1052 ILHQDDEE----------DEEENAVPDDET--VNQMLARSEEEFQTYQRIDAERRKEQGK 1099
+ EE +EEE V +T + Q L R+E+E R + + EQ
Sbjct: 2209 LFDMPLEEPSSSSVPSAPEEEEETVASKQTHILEQALCRAEDEEDI--RAATQAKAEQ-- 2264
Query: 1100 KSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKA 1133
+ L E +E + E EE + E +E +A
Sbjct: 2265 VAELAEFNENDGFPAGEGEEAGRPGAEDEEMSRA 2298
Score = 44 (20.5 bits), Expect = 4.9e-34, Sum P(3) = 4.9e-34
Identities = 27/119 (22%), Positives = 47/119 (39%)
Query: 702 TFYVAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNE 761
T+ A HR +L ++L E+ F++P + + P+ + E
Sbjct: 1950 TYTEAAHRAVLFPQQRLDQLSEIIERFIFVMPPVEAPPPSLHACHPPPWLAP-RQAAFQE 2008
Query: 762 EETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQK--VLYRHMHTKG 818
+ + L RP L R+ + +Q PD +I+ D LQ VL R + +G
Sbjct: 2009 Q----LASELWPRARP--LHRIVCNMRTQFPDL--RLIQYDCGKLQTLAVLLRQLKAEG 2059
Score = 43 (20.2 bits), Expect = 1.2e-99, Sum P(3) = 1.2e-99
Identities = 12/57 (21%), Positives = 28/57 (49%)
Query: 275 AYKRTKRQGL--KEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRN 329
A +R ++G+ K R + ++Q+ + ER +R++ + KD +++ N
Sbjct: 152 AQERRWKRGVARKVVRMVIRHHEEQRQKEERARREEQAKLRRIASTMAKDVRQFWSN 208
Score = 41 (19.5 bits), Expect = 1.9e-99, Sum P(3) = 1.9e-99
Identities = 17/96 (17%), Positives = 41/96 (42%)
Query: 219 EELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKR 278
EE+ L++ + R K + + ++++ + + + ARR+ + +
Sbjct: 142 EEMQW-LSADFAQERRWKRGVARKVVRMVIRHHEEQRQKEERARREEQAKLRRIASTMAK 200
Query: 279 TKRQGLKEARATEKLEKQQKVEAERKKR-QKHQEYI 313
RQ + ++Q ++E +RKK H ++I
Sbjct: 201 DVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFI 236
>MGI|MGI:106209 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0001655 "urogenital system development" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IMP] [GO:0010216 "maintenance of DNA
methylation" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030098 "lymphocyte differentiation"
evidence=TAS] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106209 GO:GO:0005524
GO:GO:0005634 GO:GO:0043066 GO:GO:0051301 GO:GO:0007067
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 HOGENOM:HOG000172362 OMA:ETFYTAI GO:GO:0006346
GO:GO:0030098 GO:GO:0046651 CTD:3070 HOVERGEN:HBG060049
OrthoDB:EOG4SN1N4 EMBL:U25691 EMBL:AF155210 EMBL:AK013266
EMBL:AK147126 EMBL:BC020056 EMBL:BC100394 IPI:IPI00121431
IPI:IPI00808497 PIR:JC4666 RefSeq:NP_032260.2 UniGene:Mm.392920
UniGene:Mm.486446 UniGene:Mm.57223 ProteinModelPortal:Q60848
SMR:Q60848 DIP:DIP-43735N IntAct:Q60848 MINT:MINT-2521001
STRING:Q60848 PhosphoSite:Q60848 PaxDb:Q60848 PRIDE:Q60848
DNASU:15201 Ensembl:ENSMUST00000025965 GeneID:15201 KEGG:mmu:15201
UCSC:uc008hjt.1 GeneTree:ENSGT00550000075106 InParanoid:Q60848
NextBio:287739 Bgee:Q60848 CleanEx:MM_HELLS Genevestigator:Q60848
GermOnline:ENSMUSG00000025001 Uniprot:Q60848
Length = 821
Score = 583 (210.3 bits), Expect = 1.6e-99, Sum P(3) = 1.6e-99
Identities = 120/285 (42%), Positives = 175/285 (61%)
Query: 547 EQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVN 606
+Q G ++ YQ++G+EW+ L+ N +NGILADEMGLGKT+Q IA I LM ++ V
Sbjct: 196 QQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVP 254
Query: 607 GPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTL-----QAQMKASKFNVLLT 661
GPFL+ PLSTL NW EF+R+ P + + Y G+ R+ L + Q V++T
Sbjct: 255 GPFLVCGPLSTLPNWMAEFKRFTPEIPTLLYHGTREDRRKLVKNIHKRQGTLQIHPVVVT 314
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
++E ++D+ L +WKY+I+DEGHR+KN C+L L F A ++LLLTGTPLQN L
Sbjct: 315 SFEIAMRDQNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFN-ADNKLLLTGTPLQNNL 373
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFN-APFATTGEKVELNEEETILIIRRLHKVLRPFLL 780
ELW+LLNFLLP +F + +FE WF+ + T E + E E ++ LH++L PFLL
Sbjct: 374 SELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQN-VLHMLHQILTPFLL 432
Query: 781 RRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGS 825
RRLK +V ++P K E ++ + Q++ Y + + I GS
Sbjct: 433 RRLKSDVALEVPPKREVVVYAPLCNKQEIFYTAIVNRTIANMFGS 477
Score = 465 (168.7 bits), Expect = 1.6e-99, Sum P(3) = 1.6e-99
Identities = 109/252 (43%), Positives = 151/252 (59%)
Query: 838 LMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKST 897
L N ++ LRK CNHP+M IE D V + +L SGKF +LDR+LP+LK
Sbjct: 543 LRNIMMLLRKCCNHPYM---IEYPI-DPVTQEFKID-EELVTNSGKFLILDRMLPELKKR 597
Query: 898 GHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLS 957
GH+VL+F QMT +++IL DY R F + RLDG+ +R + FN D + F+F++S
Sbjct: 598 GHKVLVFSQMTSMLDILMDYCHLRNFIFSRLDGSMSYSEREKNIYSFNT-DPDVFLFLVS 656
Query: 958 TRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERIL 1017
TRAGGLG+NL ADTVII+DSDWNP DLQAQDR HRIGQ V V RL+T N+++++I+
Sbjct: 657 TRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIV 716
Query: 1018 AAARYKLNMDEKVIQAGMFDQKSTG-SERHQFLQT-----ILHQDDEEDEEENA---VPD 1068
A K +++ +I F +G S+ FL +L D E E + + V
Sbjct: 717 ERAAAKRKLEKLIIHKNHFKGGQSGLSQSKNFLDAKELMELLKSRDYEREVKGSREKVIS 776
Query: 1069 DETVNQMLARSE 1080
DE + +L RS+
Sbjct: 777 DEDLELLLDRSD 788
Score = 43 (20.2 bits), Expect = 1.6e-99, Sum P(3) = 1.6e-99
Identities = 8/21 (38%), Positives = 16/21 (76%)
Query: 278 RTKRQGLKEARATEKLEKQQK 298
+ ++Q L+E + EKLEK+++
Sbjct: 69 KMEQQQLEEQKKKEKLEKKKR 89
Score = 39 (18.8 bits), Expect = 4.1e-99, Sum P(3) = 4.1e-99
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 291 EKLEKQQKVEA-ERKKR 306
++LE+Q+K E E+KKR
Sbjct: 73 QQLEEQKKKEKLEKKKR 89
Score = 38 (18.4 bits), Expect = 5.2e-99, Sum P(3) = 5.2e-99
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 61 IDSMKEQGLEEDPRYQKLIEMK 82
+ M++Q LEE + +KL + K
Sbjct: 67 LTKMEQQQLEEQKKKEKLEKKK 88
>FB|FBgn0086613 [details] [associations]
symbol:Ino80 "Ino80" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0000975 "regulatory region DNA
binding" evidence=IDA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006355 GO:GO:0006281 GO:GO:0006351 GO:GO:0016887
GO:GO:0006338 GO:GO:0031011 GO:GO:0006310 GO:GO:0005700
GO:GO:0010468 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0000975 KO:K11665
EMBL:AY069786 RefSeq:NP_732413.1 UniGene:Dm.33518
ProteinModelPortal:Q9VDY1 SMR:Q9VDY1 IntAct:Q9VDY1 STRING:Q9VDY1
PaxDb:Q9VDY1 EnsemblMetazoa:FBtr0083771 GeneID:42314
KEGG:dme:Dmel_CG31212 UCSC:CG31212-RA CTD:54617 FlyBase:FBgn0086613
GeneTree:ENSGT00680000100052 InParanoid:Q9VDY1 OMA:NTMAEVR
OrthoDB:EOG4SQVBH PhylomeDB:Q9VDY1 ChiTaRS:INO80 GenomeRNAi:42314
NextBio:828189 Bgee:Q9VDY1 Uniprot:Q9VDY1
Length = 1638
Score = 635 (228.6 bits), Expect = 2.0e-99, Sum P(3) = 2.0e-99
Identities = 138/357 (38%), Positives = 213/357 (59%)
Query: 552 LVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLI 611
+ G LK YQIKG+ W+ ++++ ++GILADEMGLGKT+Q+IA + ++ E V GPFL+
Sbjct: 530 MFKGTLKGYQIKGMTWLANIYDQGISGILADEMGLGKTVQSIAFLCHIAEHYGVWGPFLV 589
Query: 612 IVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA-------QMKASKFNVLLTTYE 664
I P STL NW E R+ P VV Y GSP RK L+ + + F+V++T+Y+
Sbjct: 590 ISPASTLHNWQQEMSRFVPDFKVVPYWGSPAERKILRQFWDQKHLHTRDASFHVVITSYQ 649
Query: 665 YVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPEL 724
V+ D ++ W+YM++DE +K+ + +L F +RLLL+GTP+QN + EL
Sbjct: 650 LVVSDYKYFNRIKWQYMVLDEAQAIKSAASQRWKLLLGFSCR-NRLLLSGTPIQNSMAEL 708
Query: 725 WALLNFLLPSIFKSVSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHKVLRPFLLRRL 783
WALL+F++P++F S F +WF+ + E K ++E++ I RLH +L+PF+LRR+
Sbjct: 709 WALLHFIMPTLFDSHDEFNEWFSKDIESHAENKTGIDEKQ----ISRLHMILKPFMLRRI 764
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK----GIL-LTDGSEXXXXXXXXXXXL 838
KK+VE++L DK+E ++ C ++ QK+LYR + K +L LT GS L
Sbjct: 765 KKDVENELSDKIEIMVYCPLTIRQKLLYRALKQKIRIEDLLHLTSGS-TTTSSSSSASNL 823
Query: 839 MNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLK 895
MN ++Q RK+CNHP +F+ + + S + P L G L+ R+LP K
Sbjct: 824 MNLVMQFRKVCNHPELFERRDAR-SPFFMRCAEYTIPRLIHEEG---LIHRMLPSRK 876
Score = 424 (154.3 bits), Expect = 2.0e-99, Sum P(3) = 2.0e-99
Identities = 94/200 (47%), Positives = 129/200 (64%)
Query: 865 HVGGSGIVSGPD---LYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYR 921
H G S IV PD L +GK +LD +L +LK+ GHRVL++ QMT+++++LE+Y +R
Sbjct: 1137 HGGWSSIVV-PDKETLITDAGKLFVLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHR 1195
Query: 922 GFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWN 981
+YMRLDG++K R D++ F ++ F+F+LSTRAGGLG+NL ADTVI +DSDWN
Sbjct: 1196 KHRYMRLDGSSKISARRDMVADFQTR-ADIFVFLLSTRAGGLGINLTAADTVIFYDSDWN 1254
Query: 982 PHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKST 1041
P D QA DRAHR+GQ +V V RL+ ++EERIL AR K + VI G F K
Sbjct: 1255 PTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNF--KPD 1312
Query: 1042 GSERHQFLQTILHQDDEEDE 1061
+ + + +L DDEE E
Sbjct: 1313 TLKPKEVVSLLL--DDEEIE 1330
Score = 68 (29.0 bits), Expect = 2.0e-99, Sum P(3) = 2.0e-99
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 245 KVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKR-QGLKEARATEKLEKQQKVEAER 303
+ +N QR ++ E + A+R T E K Y+R +R Q K+ R E+ KQ E
Sbjct: 354 RAINSQRIMK-ETVWRAKR-LTREMLAYWKRYERVERDQRRKQEREAEEQRKQDVELIEV 411
Query: 304 KKRQKHQEYITT 315
K++Q+ ++ T
Sbjct: 412 KRQQRKLNFLIT 423
Score = 45 (20.9 bits), Expect = 7.1e-97, Sum P(4) = 7.1e-97
Identities = 9/40 (22%), Positives = 23/40 (57%)
Query: 277 KRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTV 316
KR R+ L + E++E+ Q+ + ER+ ++ ++ + +
Sbjct: 370 KRLTREMLAYWKRYERVERDQRRKQEREAEEQRKQDVELI 409
Score = 44 (20.5 bits), Expect = 7.1e-97, Sum P(4) = 7.1e-97
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 377 KLIDQKKDKR-LAFLLSQTDEY 397
+LI+ K+ +R L FL++QT+ Y
Sbjct: 407 ELIEVKRQQRKLNFLITQTELY 428
Score = 39 (18.8 bits), Expect = 2.2e-96, Sum P(3) = 2.2e-96
Identities = 25/110 (22%), Positives = 45/110 (40%)
Query: 204 QERENRVALNIERRIEELNGSLTST-LPEHLRVKAEIELRALKVLNFQRQLRAEVIA-CA 261
Q +++ + ++R+ +LN +T T L H K + L QL E A A
Sbjct: 401 QRKQDVELIEVKRQQRKLNFLITQTELYAHFMSKKLGQGSEEDQLRILSQLDEETNARLA 460
Query: 262 RRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQE 311
+D + + A + EA L+K + + KK++K +E
Sbjct: 461 AQDDYDAGEMKLLAQENA------EAAMQRDLDKTRAFDVFAKKKEKEEE 504
Score = 39 (18.8 bits), Expect = 8.9e-34, Sum P(2) = 8.9e-34
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 277 KRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVL 317
K+T E + +KLE + VE + K K +TT+L
Sbjct: 1022 KKTSLIEEMEDVSKQKLEIES-VEVQTKSNAKSDVKVTTLL 1061
Score = 37 (18.1 bits), Expect = 4.9e-96, Sum P(4) = 4.9e-96
Identities = 8/37 (21%), Positives = 22/37 (59%)
Query: 267 LETAVNVKAYKRTKRQGLKEARAT-EKLEKQQKVEAE 302
LE A+N++ + ++ L++ ++ E+ + + V+ E
Sbjct: 25 LEAALNMRPFMNMAKRSLRKPLSSDEETDDEHVVKRE 61
>UNIPROTKB|F1RG74 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043234 "protein complex" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:LGTGNPQ EMBL:FP102572
Ensembl:ENSSSCT00000008537 Uniprot:F1RG74
Length = 3230
Score = 659 (237.0 bits), Expect = 2.4e-99, Sum P(3) = 2.4e-99
Identities = 138/322 (42%), Positives = 206/322 (63%)
Query: 535 YSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIA 594
Y++A T ++ T +L+ G+L+EYQ GL+W+V+++ LNGILADEMGLGKTIQTI+
Sbjct: 606 YTLATT--QVKTP-IPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 662
Query: 595 LITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTL-QAQMKA 653
L+ +L +K GP LIIVP S + NW +E +RW PS ++ Y G+ RK Q K
Sbjct: 663 LLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKP 722
Query: 654 SKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLT 713
+ F+V +T+Y+ V++D + +W+Y+I+DE +KN + L F + RLLLT
Sbjct: 723 NAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFN-SQRRLLLT 781
Query: 714 GTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHK 773
GTPLQN L ELW+L++FL+P +F+S F++WF+ P TG +E ++E +++RLHK
Sbjct: 782 GTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPL--TG-MIEGSQEYNEGLVKRLHK 838
Query: 774 VLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXX 833
VLRPFLLRR+K +VE Q+P K E++I+C +S Q+ LY + T E
Sbjct: 839 VLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQ----TTTKETLATGHF 894
Query: 834 XXXXLMNTIVQLRKLCNHPFMF 855
++N ++QLRK+CNHP +F
Sbjct: 895 MS--VINILMQLRKVCNHPNLF 914
Score = 436 (158.5 bits), Expect = 2.4e-99, Sum P(3) = 2.4e-99
Identities = 105/274 (38%), Positives = 157/274 (57%)
Query: 875 PDLYRVS---GKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGT 931
PDL + GK + L +L +LK+ GHRVL+F QMT+++++LE + +Y G Y+RLDG+
Sbjct: 2033 PDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGS 2092
Query: 932 TKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDR 991
T+ E R L+++FNA D F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR
Sbjct: 2093 TRVEQRQALMERFNA-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDR 2151
Query: 992 AHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQT 1051
HRIGQ +V + RL++ +VEE IL A K + + I+ G F +T + Q ++
Sbjct: 2152 CHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNF---TTAYFKQQTIRE 2208
Query: 1052 ILHQDDEE----------DEEENAVPDDET--VNQMLARSEEEFQTYQRIDAERRKEQGK 1099
+ EE ++EE V +T + Q L R+E+E R + + EQ
Sbjct: 2209 LFDMPLEEPSGSSVPSAPEDEEETVASKQTHILEQALCRAEDEEDI--RAATQAKAEQ-- 2264
Query: 1100 KSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKA 1133
+ L E +E + E EE + E +E +A
Sbjct: 2265 VAELAEFNENDGFPAGEGEEAGRPGAEDEEMSRA 2298
Score = 43 (20.2 bits), Expect = 2.4e-99, Sum P(3) = 2.4e-99
Identities = 12/57 (21%), Positives = 28/57 (49%)
Query: 275 AYKRTKRQGL--KEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRN 329
A +R ++G+ K R + ++Q+ + ER +R++ + KD +++ N
Sbjct: 152 AQERRWKRGVARKVVRMVIRHHEEQRQKEERARREEQAKLRRIASTMAKDVRQFWSN 208
Score = 41 (19.5 bits), Expect = 3.9e-99, Sum P(3) = 3.9e-99
Identities = 17/96 (17%), Positives = 41/96 (42%)
Query: 219 EELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKR 278
EE+ L++ + R K + + ++++ + + + ARR+ + +
Sbjct: 142 EEMQW-LSADFAQERRWKRGVARKVVRMVIRHHEEQRQKEERARREEQAKLRRIASTMAK 200
Query: 279 TKRQGLKEARATEKLEKQQKVEAERKKR-QKHQEYI 313
RQ + ++Q ++E +RKK H ++I
Sbjct: 201 DVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFI 236
>UNIPROTKB|B5DE69 [details] [associations]
symbol:chd8 "Chromodomain-helicase-DNA-binding protein 8"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0016055 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG107676 CTD:57680
KO:K04494 EMBL:BC168549 RefSeq:NP_001131089.2 UniGene:Str.42730
GeneID:100192376 KEGG:xtr:100192376 Xenbase:XB-GENE-966847
Uniprot:B5DE69
Length = 2184
Score = 966 (345.1 bits), Expect = 3.6e-99, Sum P(3) = 3.6e-99
Identities = 234/605 (38%), Positives = 343/605 (56%)
Query: 554 NG-KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVN--GPFL 610
NG +L+EYQ++G+ W++ + N N ILADEMGLGKTIQ+I T+L E V GPFL
Sbjct: 751 NGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSI---TFLQEVYNVGIRGPFL 807
Query: 611 IIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA-QMK-----------ASKFNV 658
+I PLST++NW EF W +N + Y GS R+ +Q +M A KF+
Sbjct: 808 VIAPLSTITNWEREFGSWT-QMNTIVYHGSLASRQMIQQYEMYCKDSKGRLIPGAYKFDA 866
Query: 659 LLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQ 718
L+TT+E V+ D L ++ W+ +IIDE HR+KN +CKL L + H++LLTGTPLQ
Sbjct: 867 LITTFEMVLSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLE-HKVLLTGTPLQ 925
Query: 719 NKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPF 778
N + EL++LL+FL P+ F S + F + F +L EE + ++L +L+P
Sbjct: 926 NTVEELFSLLHFLEPTQFSSEAEFLKDFG----------DLKTEEQV---QKLQAILKPM 972
Query: 779 LLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXX 837
+LRRLK++VE L K E II+ +++ +QK YR + K LT G+
Sbjct: 973 MLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGASQSNTPN----- 1027
Query: 838 LMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLY-----RVSGKFELLDRILP 892
L+NT+++LRK CNHP++ EEK + V PD + R SGK L+D++LP
Sbjct: 1028 LLNTMMELRKCCNHPYLITGAEEKIISEFREATPVVPPDFHVQAMVRSSGKLVLIDKLLP 1087
Query: 893 KLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYF 952
KL++ GH+VL+F QM + ++ILEDY R + Y R+DG + R + +F+ PDS+ F
Sbjct: 1088 KLRAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNMRQAAIDRFSRPDSDRF 1147
Query: 953 IFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSV 1012
+F+L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V++ RL+T NS
Sbjct: 1148 VFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSY 1207
Query: 1013 EERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQF----LQTILHQD------DEEDEE 1062
E + A KL +D+ V+Q+ QF ++ +L + DE+DE
Sbjct: 1208 EREMFDKASLKLGLDKAVLQSMSGRDNHLSGPIQQFTKKEIEDLLRKGAYAAIMDEDDEG 1267
Query: 1063 ENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQ 1122
+D ++Q+L R T I++E + K+ + D + + ++
Sbjct: 1268 SKFCEED--IDQILLRRT----TTITIESEGKGSTFSKASFVASENRTDISLDDPNFWQK 1321
Query: 1123 WAFEA 1127
WA +A
Sbjct: 1322 WAKKA 1326
Score = 47 (21.6 bits), Expect = 3.6e-99, Sum P(3) = 3.6e-99
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 284 LKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRL 337
LKE K+E+ +++EA + ++ T + + +EY NQ R +L
Sbjct: 707 LKEDVDDGKIEEFKRIEARQPNLKRVARPAATSWKKLELSREYQNGNQLREYQL 760
Score = 45 (20.9 bits), Expect = 3.6e-99, Sum P(3) = 3.6e-99
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 66 EQGLEEDPR-YQKLIEMKANRTEIKH 90
EQ LE D R +QKL K T+++H
Sbjct: 630 EQ-LERDKRIHQKLKRFKTKMTQMQH 654
>UNIPROTKB|F1NLW6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02019534 EMBL:AADN02019532
EMBL:AADN02019533 IPI:IPI00572954 Ensembl:ENSGALT00000002030
ArrayExpress:F1NLW6 Uniprot:F1NLW6
Length = 2005
Score = 972 (347.2 bits), Expect = 7.3e-99, Sum P(2) = 7.3e-99
Identities = 237/638 (37%), Positives = 357/638 (55%)
Query: 554 NGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIV 613
+ +L+EYQ++G+ W++ + N N ILADEMGLGKTIQ+I ++ + ++GPFLII
Sbjct: 255 SNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIF-LMGIHGPFLIIA 313
Query: 614 PLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA-QMKAS-----------KFNVLLT 661
PLST++NW EF W +N + Y GS R+ +Q +M KF V++T
Sbjct: 314 PLSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVIT 372
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
T+E ++ D L K+ W+ ++IDE HR+KN +CKL L + H++LLTGTPLQN +
Sbjct: 373 TFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALE-HKVLLTGTPLQNSV 431
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 781
EL++LLNFL P F S + F + F +L EE + ++L +L+P +LR
Sbjct: 432 EELFSLLNFLEPQQFPSETAFLEEFG----------DLKTEEQV---KKLQSILKPMMLR 478
Query: 782 RLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMN 840
RLK +VE L K E II+ +++ +QK YR + K L+ G+ L+N
Sbjct: 479 RLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPN-----LIN 533
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPD-----LYRVSGKFELLDRILPKLK 895
T+++LRK CNHP++ EEK + + PD + + +GK L+D++LPKL
Sbjct: 534 TMMELRKCCNHPYLINGAEEKILEDFRKTHSPEAPDFQLQAMIQAAGKLVLIDKLLPKLI 593
Query: 896 STGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
+ GH+VL+F QM + ++ILEDY R + Y R+DG + R + +F PDS+ F+F+
Sbjct: 594 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 653
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+T NS E
Sbjct: 654 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYERE 713
Query: 1016 ILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQT--ILHQD------DEEDEEENAVP 1067
+ A KL +D+ V+Q + G ++ ++ +L + DEEDE
Sbjct: 714 MFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCE 773
Query: 1068 DDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWA--- 1124
+D ++Q+L R QT I +E + K+ + D + + ++WA
Sbjct: 774 ED--IDQILQRRT---QTIT-IQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIA 827
Query: 1125 ---FEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLK 1159
+AK E+++L + R R RKQ + +S E E ++
Sbjct: 828 ELDTDAKNEKESLVIDR-PRVRKQTKHYNSFEEDELME 864
Score = 54 (24.1 bits), Expect = 7.3e-99, Sum P(2) = 7.3e-99
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 69 LEEDPRY-QKLIEMKANRTEIKHAFT 93
LE+DPR QK+ + + ++KH FT
Sbjct: 135 LEKDPRISQKIKRFRNKQAQMKHIFT 160
>UNIPROTKB|F1NLV5 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OMA:CKWATME GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00588365
Ensembl:ENSGALT00000002034 ArrayExpress:F1NLV5 Uniprot:F1NLV5
Length = 2007
Score = 972 (347.2 bits), Expect = 7.3e-99, Sum P(2) = 7.3e-99
Identities = 237/638 (37%), Positives = 357/638 (55%)
Query: 554 NGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIV 613
+ +L+EYQ++G+ W++ + N N ILADEMGLGKTIQ+I ++ + ++GPFLII
Sbjct: 255 SNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIF-LMGIHGPFLIIA 313
Query: 614 PLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA-QMKAS-----------KFNVLLT 661
PLST++NW EF W +N + Y GS R+ +Q +M KF V++T
Sbjct: 314 PLSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVIT 372
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
T+E ++ D L K+ W+ ++IDE HR+KN +CKL L + H++LLTGTPLQN +
Sbjct: 373 TFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALE-HKVLLTGTPLQNSV 431
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 781
EL++LLNFL P F S + F + F +L EE + ++L +L+P +LR
Sbjct: 432 EELFSLLNFLEPQQFPSETAFLEEFG----------DLKTEEQV---KKLQSILKPMMLR 478
Query: 782 RLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMN 840
RLK +VE L K E II+ +++ +QK YR + K L+ G+ L+N
Sbjct: 479 RLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPN-----LIN 533
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPD-----LYRVSGKFELLDRILPKLK 895
T+++LRK CNHP++ EEK + + PD + + +GK L+D++LPKL
Sbjct: 534 TMMELRKCCNHPYLINGAEEKILEDFRKTHSPEAPDFQLQAMIQAAGKLVLIDKLLPKLI 593
Query: 896 STGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
+ GH+VL+F QM + ++ILEDY R + Y R+DG + R + +F PDS+ F+F+
Sbjct: 594 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 653
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+T NS E
Sbjct: 654 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYERE 713
Query: 1016 ILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQT--ILHQD------DEEDEEENAVP 1067
+ A KL +D+ V+Q + G ++ ++ +L + DEEDE
Sbjct: 714 MFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCE 773
Query: 1068 DDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWA--- 1124
+D ++Q+L R QT I +E + K+ + D + + ++WA
Sbjct: 774 ED--IDQILQRRT---QTIT-IQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIA 827
Query: 1125 ---FEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLK 1159
+AK E+++L + R R RKQ + +S E E ++
Sbjct: 828 ELDTDAKNEKESLVIDR-PRVRKQTKHYNSFEEDELME 864
Score = 54 (24.1 bits), Expect = 7.3e-99, Sum P(2) = 7.3e-99
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 69 LEEDPRY-QKLIEMKANRTEIKHAFT 93
LE+DPR QK+ + + ++KH FT
Sbjct: 135 LEKDPRISQKIKRFRNKQAQMKHIFT 160
>UNIPROTKB|H0YJG4 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL135744 EMBL:AL161747
HGNC:HGNC:20153 Ensembl:ENST00000555935 Uniprot:H0YJG4
Length = 873
Score = 956 (341.6 bits), Expect = 2.0e-98, Sum P(2) = 2.0e-98
Identities = 233/631 (36%), Positives = 357/631 (56%)
Query: 556 KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVPL 615
+L+EYQ++G+ W++ + N N ILADEMGLGKTIQ+IA + + ++GPFL+I PL
Sbjct: 36 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPL 94
Query: 616 STLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA-QMK-----------ASKFNVLLTTY 663
ST++NW EF W +N + Y GS R+ +Q +M A KF+ L+TT+
Sbjct: 95 STITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTF 153
Query: 664 EYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPE 723
E ++ D L ++ W+ +IIDE HR+KN +CKL L + H++LLTGTPLQN + E
Sbjct: 154 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLE-HKVLLTGTPLQNTVEE 212
Query: 724 LWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 783
L++LL+FL PS F S S F + F +L EE + ++L +L+P +LRRL
Sbjct: 213 LFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAILKPMMLRRL 259
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMNTI 842
K++VE L K E II+ +++ +QK YR + K L+ G+ L+NT+
Sbjct: 260 KEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGA-----GHTNMPNLLNTM 314
Query: 843 VQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLY-----RVSGKFELLDRILPKLKST 897
++LRK CNHP++ EEK + + D + R +GK L+D++LPKLK+
Sbjct: 315 MELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAG 374
Query: 898 GHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLS 957
GH+VL+F QM + ++ILEDY R + Y R+DG + R + +F+ PDS+ F+F+L
Sbjct: 375 GHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 434
Query: 958 TRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERIL 1017
TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+T NS E +
Sbjct: 435 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 494
Query: 1018 AAARYKLNMDEKVIQA-GMFDQKSTGSERH--QFLQTILHQDDE----EDEEENAVPDDE 1070
A KL +D+ V+Q+ D TG ++ + ++ +L + E+++E + +E
Sbjct: 495 DKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDEGSKFCEE 554
Query: 1071 TVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEE 1130
++Q+L R T I++E + K+ + D + + ++WA +A +
Sbjct: 555 DIDQILLRRT----TTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKKADLD 610
Query: 1131 EKALHMGRG-----SRQRKQVDYTDSLTEKE 1156
L+ R RKQ + +L + +
Sbjct: 611 MDLLNSKNNLVIDTPRVRKQTRHFSTLKDDD 641
Score = 41 (19.5 bits), Expect = 2.0e-98, Sum P(2) = 2.0e-98
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 280 KRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNN--QARIMRL 337
KR +A A +KLE + + + R+ E + +L F Y+R N A M L
Sbjct: 12 KRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLL-----FNWYNRQNCILADEMGL 66
Query: 338 NKAVMN 343
K + +
Sbjct: 67 GKTIQS 72
>TAIR|locus:2087780 [details] [associations]
symbol:PIE1 "PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0009910 "negative regulation of flower development"
evidence=IGI] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0048441 "petal development" evidence=IGI] [GO:0048451 "petal
formation" evidence=IGI;RCA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042742 "defense
response to bacterium" evidence=IGI;RCA] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0003002 "regionalization" evidence=RCA]
[GO:0006338 "chromatin remodeling" evidence=RCA] [GO:0007155 "cell
adhesion" evidence=RCA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0048449 "floral organ formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005618
GO:GO:0046686 EMBL:CP002686 GO:GO:0003677 GO:GO:0042742
GO:GO:0003682 Gene3D:1.10.10.60 GO:GO:0016514 GO:GO:0004386
GO:GO:0009910 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 KO:K11320 GO:GO:0048451
EMBL:AY279398 IPI:IPI00545059 RefSeq:NP_187887.3 UniGene:At.39549
SMR:Q7X9V2 IntAct:Q7X9V2 STRING:Q7X9V2 EnsemblPlants:AT3G12810.1
GeneID:820463 KEGG:ath:AT3G12810 TAIR:At3g12810 InParanoid:Q7X9V2
OMA:CCHPPPS ProtClustDB:CLSN2680833 Genevestigator:Q7X9V2
Uniprot:Q7X9V2
Length = 2055
Score = 651 (234.2 bits), Expect = 2.8e-98, Sum P(3) = 2.8e-98
Identities = 140/314 (44%), Positives = 192/314 (61%)
Query: 545 VTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKK 604
V + L+ L+EYQ GL+W+V+++ LNGILADEMGLGKTI TIAL+ +L K
Sbjct: 524 VRTKLPFLLKHSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKG 583
Query: 605 VNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTL-QAQMKASKFNVLLTTY 663
+ GP LI+VP S + NW EF +W P+ ++ Y GS RK Q MK + F+V +TTY
Sbjct: 584 IWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNSFHVCITTY 643
Query: 664 EYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPE 723
VI+D + WKY+I+DE H +KN + L F + R+LLTGTPLQN L E
Sbjct: 644 RLVIQDSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFN-SKRRILLTGTPLQNDLME 702
Query: 724 LWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVE-LNEEETILIIRRLHKVLRPFLLRR 782
LW+L++FL+P +F+S F+ WF P A E E +N+E +I RLH VLRPFLLRR
Sbjct: 703 LWSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINKE----VIDRLHNVLRPFLLRR 758
Query: 783 LKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTI 842
LK++VE QLP K E++I C +S Q+ LY I T+ +++ I
Sbjct: 759 LKRDVEKQLPSKHEHVIFCRLSKRQRNLYEDF----IASTETQ--ATLTSGSFFGMISII 812
Query: 843 VQLRKLCNHPFMFQ 856
+QLRK+CNHP +F+
Sbjct: 813 MQLRKVCNHPDLFE 826
Score = 420 (152.9 bits), Expect = 2.8e-98, Sum P(3) = 2.8e-98
Identities = 96/248 (38%), Positives = 150/248 (60%)
Query: 882 GKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLL 941
GK + L +L KLK GHR L+F QMT+++++LE + + G+ YMRLDG+T E+R L+
Sbjct: 1075 GKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTLM 1134
Query: 942 KKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 1001
++FN + + F+F+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1135 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1193
Query: 1002 RVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFD----QKSTGSERHQFLQTILHQDD 1057
+ RL++ +++EE IL A K +D VIQ G ++ +K E + + +D+
Sbjct: 1194 HIYRLISESTIEENILKKANQKRVLDNLVIQNGEYNTEFFKKLDPMELFSGHKALTTKDE 1253
Query: 1058 EEDEEENA--VP-DDETVNQMLARSEEE--FQTYQRIDAERRKEQGKKSRLIEVSELP-- 1110
+E + +P + V L ++E+E + +R++ E + + + E E P
Sbjct: 1254 KETSKHCGADIPLSNADVEAALKQAEDEADYMALKRVEQEEAVDNQEFTE--EPVERPED 1311
Query: 1111 DWLIKEDE 1118
D L+ ED+
Sbjct: 1312 DELVNEDD 1319
Score = 49 (22.3 bits), Expect = 2.8e-98, Sum P(3) = 2.8e-98
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 384 DKRLAFLLSQTDEYISNL 401
DK+L FLL QT+ Y + L
Sbjct: 141 DKQLEFLLGQTERYSTML 158
Score = 49 (22.3 bits), Expect = 2.8e-98, Sum P(3) = 2.8e-98
Identities = 24/116 (20%), Positives = 42/116 (36%)
Query: 282 QGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAV 341
Q K A K Q ERK +++ Q L KD K++ + ++ ++ V
Sbjct: 72 QAKKVALRASKGMLDQASREERKLKEEEQRLRKVALNISKDMKKFWMKVEKLVLYKHQLV 131
Query: 342 MNYHANAXXXXXXXXXXXXXXXXXXLMAED-EEGYRKLIDQKKDKRLAFLLSQTDE 396
N ++AE+ E Y++ K L + S++DE
Sbjct: 132 RNEKKKKAMDKQLEFLLGQTERYSTMLAENLVEPYKQG-QNTPSKPLLTIESKSDE 186
Score = 43 (20.2 bits), Expect = 9.9e-59, Sum P(3) = 9.9e-59
Identities = 21/80 (26%), Positives = 36/80 (45%)
Query: 1245 IKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDELQKDFKT---LCRNAQIYNEE 1301
+K ++E D E + P++ R ED + + D+++ D L A EE
Sbjct: 1287 LKRVEQEEAVDNQEFTEEPVE------RPEDDELVNEDDIKADEPADQGLVA-AGPAKEE 1339
Query: 1302 LSLIHEDSVVLESVFTKARQ 1321
+SL+H D +V T + Q
Sbjct: 1340 MSLLHSDIRDERAVITTSSQ 1359
Score = 37 (18.1 bits), Expect = 4.2e-58, Sum P(3) = 4.2e-58
Identities = 17/83 (20%), Positives = 38/83 (45%)
Query: 1081 EEFQTYQRIDAERRKEQGKKSRL-IEVSELP-DWLIKE-DEEIEQWAFEAKEEEKALHMG 1137
E F ++ + + KE K I +S + +K+ ++E + A + E+E+A+
Sbjct: 1240 ELFSGHKALTTKDEKETSKHCGADIPLSNADVEAALKQAEDEADYMALKRVEQEEAVDNQ 1299
Query: 1138 RGSRQRKQVDYTDSLTEKEWLKA 1160
+ + + D L ++ +KA
Sbjct: 1300 EFTEEPVERPEDDELVNEDDIKA 1322
>DICTYBASE|DDB_G0267638 [details] [associations]
symbol:DDB_G0267638 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0267638 GO:GO:0005524
GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR014012 PROSITE:PS51204 KO:K11320 RefSeq:XP_647182.1
ProteinModelPortal:Q55GK2 EnsemblProtists:DDB0220518 GeneID:8615986
KEGG:ddi:DDB_G0267638 InParanoid:Q55GK2 OMA:ISFEAFA Uniprot:Q55GK2
Length = 3069
Score = 670 (240.9 bits), Expect = 3.3e-98, Sum P(4) = 3.3e-98
Identities = 142/313 (45%), Positives = 190/313 (60%)
Query: 545 VTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKK 604
V + L+ L+EYQ GL+W+VSL+ NLNGILADEMGLGKTI TI+LI YL +K
Sbjct: 769 VRTKVPFLLKFPLREYQHIGLDWLVSLYEKNLNGILADEMGLGKTIMTISLIAYLAVQKG 828
Query: 605 VNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTY 663
V GP LI+VP S L NW +EF+RW P + + Y G+ RK + K++ F+V +T+Y
Sbjct: 829 VWGPHLIVVPSSVLFNWEMEFKRWCPGLKIFTYHGTSRDRKANRKGWSKSNAFHVCITSY 888
Query: 664 EYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPE 723
V+ D + W YMI+DE H +KN + + F RLLLTGTPLQN L E
Sbjct: 889 SMVMSDHLIFRRKKWVYMILDEAHVIKNFKTQRWQNMLHFNTE-RRLLLTGTPLQNNLME 947
Query: 724 LWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 783
LW+L++FL+P IF+S F+ WF+ P TG +E ++ II RLH VLRPFLLRRL
Sbjct: 948 LWSLMHFLMPDIFQSHREFQDWFSNP--VTG-MIEGGDDVNEDIINRLHAVLRPFLLRRL 1004
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIV 843
KK+VE Q+P K +I+ C MS QK LY + S ++N ++
Sbjct: 1005 KKDVEKQMPPKHTHIVPCSMSRRQKFLYEEF------INSSSTQSTLSSGSFFSIINILM 1058
Query: 844 QLRKLCNHPFMFQ 856
QLRK+CNHP +F+
Sbjct: 1059 QLRKVCNHPDLFE 1071
Score = 423 (154.0 bits), Expect = 3.3e-98, Sum P(4) = 3.3e-98
Identities = 92/222 (41%), Positives = 136/222 (61%)
Query: 882 GKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLL 941
GK + L +L +LK GHR L+F QMT++++I E + + + Y+RLDG+TK + R L
Sbjct: 1379 GKLQQLAILLRRLKQQGHRALIFTQMTKMLDIFETFLNLHAYTYLRLDGSTKIDKRQVLT 1438
Query: 942 KKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 1001
++FN D + F+F+LSTR+GGLGLNL ADTVI +D+DWNP D QAQDR HRIGQ EV
Sbjct: 1439 ERFNT-DPKIFLFILSTRSGGLGLNLTGADTVIFYDTDWNPSMDAQAQDRCHRIGQTREV 1497
Query: 1002 RVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQ---KSTGSERHQFLQTILHQDDE 1058
+ R +T +++EE IL + K +D+ VI+AG F K+ + TI +D+
Sbjct: 1498 NIYRFITQHTIEENILKKSNQKRQLDKMVIKAGEFTTDFFKNLNLSTKSSIDTI--KDNV 1555
Query: 1059 EDEE-ENAVPDDETVNQMLA------RSEEEFQTYQRIDAER 1093
+E ENAV E + +LA ++ E+Q + I ++
Sbjct: 1556 TQQEWENAVEQAEDESDVLAYKNALKEADNEYQEFVEIKDDK 1597
Score = 69 (29.3 bits), Expect = 7.2e-62, Sum P(3) = 7.2e-62
Identities = 29/154 (18%), Positives = 65/154 (42%)
Query: 1008 TVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFL----QTILHQDDEEDEEE 1063
T + VE+ + ++ L + E + F +S G+ Q L Q Q ++ +++
Sbjct: 1631 TQDLVEDYLNPIQKFALKLTESI---SSFTLESYGTVTKQQLKQQQQQQQQQQQQQQQQQ 1687
Query: 1064 NAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDE-EIEQ 1122
+ Q + +++ Q Q+ +++++Q ++ +++++ E +KE+E E E
Sbjct: 1688 QQQQQQQQQQQQQQQQKQKQQQQQQQQQQQQQQQQQQPKILKLDEKDKENLKENEKEKEN 1747
Query: 1123 WAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKE 1156
E E + KQ + EKE
Sbjct: 1748 ENENENENENEKEKDNEKEREKQEKENEIEIEKE 1781
Score = 59 (25.8 bits), Expect = 8.1e-61, Sum P(3) = 8.1e-61
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 1038 QKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQ 1097
Q+ ++ Q Q + + DE+D+E + E N+ +E E + + D E+ +E+
Sbjct: 1712 QQQQQQQQQQQQQPKILKLDEKDKENLKENEKEKENEN--ENENENENEKEKDNEKEREK 1769
Query: 1098 GKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEK 1132
+K IE+ E KE+E+ + + KE E+
Sbjct: 1770 QEKENEIEI-EKEKGNEKENEKENE---KEKENER 1800
Score = 56 (24.8 bits), Expect = 1.7e-60, Sum P(3) = 1.7e-60
Identities = 28/136 (20%), Positives = 60/136 (44%)
Query: 984 QDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGS 1043
Q Q Q + + Q+ + ++L+L + +E + + K N +E + +K
Sbjct: 1708 QQQQQQQQQQQQQQQQQPKILKLDEKD--KENLKENEKEKENENENENENENEKEKDNEK 1765
Query: 1044 ERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRL 1103
ER + Q+ E + E +E N+ +E+E + + D ++ ++Q K +
Sbjct: 1766 EREK-------QEKENEIEIEKEKGNEKENEK--ENEKEKENERDKDKDKDQDQDKDQEM 1816
Query: 1104 IEVSELPDWLIKEDEE 1119
++E+P K DE+
Sbjct: 1817 KIINEIPP---KNDED 1829
Score = 53 (23.7 bits), Expect = 4.1e-33, Sum P(3) = 4.1e-33
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 552 LVNGKLKEY-QIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFL 610
L+NGK++E+ G + +F +NL+ + + L T + + T +EK + P L
Sbjct: 217 LINGKVEEFCNSNGFSFYSQIFIDNLSSLTSKS--LQPTTTSSKIPTIPVEKPIIEKPTL 274
Score = 49 (22.3 bits), Expect = 9.0e-60, Sum P(3) = 9.0e-60
Identities = 24/91 (26%), Positives = 38/91 (41%)
Query: 1233 TDSDGRVLSEPFIKLPSRKEL--PDYYEV--IDRPMDIKKILGRIEDGKYSSVDELQ-KD 1287
T S G S I + RK PD +E+ I P+++ I + +D++ K+
Sbjct: 1044 TLSSGSFFSIINILMQLRKVCNHPDLFEIRPIVSPLELYPIHFKTSSIVIDILDDIPIKN 1103
Query: 1288 FKTLCRNAQIYNEELSLIHEDSVVLESVFTK 1318
N + N E S H DS + S+ K
Sbjct: 1104 LNLNLLNLDLINYENSFSHYDSNQINSLIPK 1134
Score = 46 (21.3 bits), Expect = 1.8e-59, Sum P(3) = 1.8e-59
Identities = 15/114 (13%), Positives = 50/114 (43%)
Query: 1009 VNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPD 1068
+ + E ++ R+ +++QA + Q+ + Q Q Q ++ +++
Sbjct: 2487 ITASEMALMTTNRFIREKKNQMLQAQLQAQQRAQMSQQQQQQQQQQQQQQQQQQQQQQQQ 2546
Query: 1069 DETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQ 1122
+ Q + +++ Q Q+ ++ +Q ++ + + + P L + ++++Q
Sbjct: 2547 QQQQQQQQQQQQQQQQQPQQPQQPQQLQQPQQLQQPQQLQQPQQL--QPQQLQQ 2598
Score = 46 (21.3 bits), Expect = 7.6e-59, Sum P(4) = 7.6e-59
Identities = 16/68 (23%), Positives = 29/68 (42%)
Query: 980 WNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDE--KVIQAGMFD 1037
W+ +D D G+ ++ + + NS RI R K + E KVIQ +
Sbjct: 2359 WSQQEDKLILDNVKNFGENWDL--ITFIIQNSNYSRINRVTRSKSQISERYKVIQKENNN 2416
Query: 1038 QKSTGSER 1045
+ + G+ +
Sbjct: 2417 ENNNGNNK 2424
Score = 42 (19.8 bits), Expect = 4.8e-59, Sum P(3) = 4.8e-59
Identities = 24/123 (19%), Positives = 58/123 (47%)
Query: 1038 QKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQ 1097
Q+ ++ Q Q L Q + + + ++ NQ + ++++Q YQ+ ++Q
Sbjct: 1161 QQQLQQQQQQLQQQQLQQQQFQQQFQQQNYNNNNFNQQQQQQQQQYQ-YQQ---NNNQQQ 1216
Query: 1098 GKKSRL-IEVSELPDWLIKEDEE-IEQWAFE-AKEEEKALHMGRGSRQRKQVDYTDSLTE 1154
S L I ++ ++ IK +E +++ ++ +K + ++ GR + V TD +
Sbjct: 1217 NIHSCLDIYQNQRNEFQIKRYQETLDRMRYQKSKYYNRPIY-GRDLIE--SVKITDPI-- 1271
Query: 1155 KEW 1157
++W
Sbjct: 1272 RDW 1274
Score = 41 (19.5 bits), Expect = 3.3e-98, Sum P(4) = 3.3e-98
Identities = 14/90 (15%), Positives = 43/90 (47%)
Query: 1070 ETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKE 1129
E NQML + + Q QR ++++Q ++ + + + ++ ++ +Q + ++
Sbjct: 2503 EKKNQML---QAQLQAQQRAQMSQQQQQQQQQQQQQQQQQQQ---QQQQQQQQQQQQQQQ 2556
Query: 1130 EEKALHMGRGSRQRKQVDYTDSLTEKEWLK 1159
+++ + +Q +Q+ L + + L+
Sbjct: 2557 QQQQQQQPQQPQQPQQLQQPQQLQQPQQLQ 2586
Score = 40 (19.1 bits), Expect = 3.3e-98, Sum P(4) = 3.3e-98
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 382 KKDKRLAFLLSQTDEYISNL 401
++DK+L ++ +T+ Y SNL
Sbjct: 598 ERDKQLELIVGKTEAY-SNL 616
Score = 40 (19.1 bits), Expect = 7.8e-59, Sum P(3) = 7.8e-59
Identities = 13/63 (20%), Positives = 29/63 (46%)
Query: 1040 STGSERHQF-LQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQG 1098
ST ++ ++ L QD+ E + ++ +N + S + ++ D R+K++
Sbjct: 2261 STSRKKSEYDLFDASSQDEGSTNESGSTTNNNNINNPTSTSSSSSSSGRKRD--RKKQRL 2318
Query: 1099 KKS 1101
KS
Sbjct: 2319 SKS 2321
Score = 38 (18.4 bits), Expect = 6.9e-98, Sum P(4) = 6.9e-98
Identities = 14/59 (23%), Positives = 32/59 (54%)
Query: 1076 LARSEEEFQTYQRI--DAERRKEQGKKSRLI-EVSELPDWLIKEDEEIEQWAFEAKEEE 1131
L R + + Q Q+ + KE+ K+ +L+ ++ + D + K +E E+ A E ++++
Sbjct: 2084 LKRGKIQKQVAQQYVYSKQHTKEKEKERKLLMKMKKEKDKIEKAKQEEERRAKEKRDQK 2142
Score = 37 (18.1 bits), Expect = 6.5e-58, Sum P(4) = 6.5e-58
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 1056 DDEEDEEENAVPDDE 1070
DDE D++ + DDE
Sbjct: 1952 DDEADDDGDDEADDE 1966
Score = 37 (18.1 bits), Expect = 1.9e-31, Sum P(3) = 1.9e-31
Identities = 9/55 (16%), Positives = 27/55 (49%)
Query: 294 EKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIM--RLNKAVMNYHA 346
++QQ+++ ++ ++Q+ Q+ + +F + + Q + + N N H+
Sbjct: 1166 QQQQQLQQQQLQQQQFQQQFQQQNYNNNNFNQQQQQQQQQYQYQQNNNQQQNIHS 1220
>FB|FBgn0020306 [details] [associations]
symbol:dom "domino" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=IEA;NAS] [GO:0008283 "cell
proliferation" evidence=NAS] [GO:0016458 "gene silencing"
evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0002165 "instar larval or pupal development"
evidence=IMP] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0035207 "negative regulation of hemocyte
proliferation" evidence=TAS] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000381 "regulation of alternative
mRNA splicing, via spliceosome" evidence=IMP] [GO:0000123 "histone
acetyltransferase complex" evidence=IPI] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IGI] [GO:0035222
"wing disc pattern formation" evidence=IGI] [GO:0010629 "negative
regulation of gene expression" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0070983 "dendrite guidance"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:2000637
"positive regulation of gene silencing by miRNA" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AE013599 GO:GO:0005524
GO:GO:0006355 GO:GO:0003677 GO:GO:0035222 GO:GO:0048477
GO:GO:0016573 GO:GO:0045747 GO:GO:0006351 GO:GO:0007049
GO:GO:0035267 GO:GO:0004386 GO:GO:0030097 GO:GO:0043486
GO:GO:2000637 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016458 InterPro:IPR017877
PROSITE:PS50090 GO:GO:0070983 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 GO:GO:0000381 EMBL:AF076776 EMBL:AF254373
EMBL:AY058653 RefSeq:NP_524833.2 RefSeq:NP_788424.1 UniGene:Dm.7802
ProteinModelPortal:Q9NDJ2 SMR:Q9NDJ2 IntAct:Q9NDJ2 STRING:Q9NDJ2
PaxDb:Q9NDJ2 EnsemblMetazoa:FBtr0071603 GeneID:45655
KEGG:dme:Dmel_CG9696 UCSC:CG9696-RA CTD:45655 FlyBase:FBgn0020306
GeneTree:ENSGT00530000063427 InParanoid:Q9NDJ2 KO:K11320
OMA:TENDASA OrthoDB:EOG4C5B08 PhylomeDB:Q9NDJ2 GenomeRNAi:45655
NextBio:838265 Bgee:Q9NDJ2 GO:GO:0002165 GO:GO:0035207
Uniprot:Q9NDJ2
Length = 3198
Score = 660 (237.4 bits), Expect = 7.5e-98, Sum P(5) = 7.5e-98
Identities = 137/313 (43%), Positives = 191/313 (61%)
Query: 545 VTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKK 604
V L+ L+EYQ GL+W+V++ LNGILADEMGLGKTIQTIAL+ +L K
Sbjct: 902 VVTPVPFLLKHSLREYQHIGLDWLVTMNERKLNGILADEMGLGKTIQTIALLAHLACAKG 961
Query: 605 VNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQM-KASKFNVLLTTY 663
GP LI+VP S + NW +EF++W P ++ Y GS RK + K + F+V +T+Y
Sbjct: 962 NWGPHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSY 1021
Query: 664 EYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPE 723
+ V++D+ + WKY+I+DE +KN + +L F RLLLTGTPLQN L E
Sbjct: 1022 KLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTE-RRLLLTGTPLQNDLME 1080
Query: 724 LWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 783
LW+L++FL+P +F S F++WF+ P TG +E N E +I RLHKV+RPFLLRRL
Sbjct: 1081 LWSLMHFLMPYVFSSHREFKEWFSNPM--TG-MIEGNMEYNETLITRLHKVIRPFLLRRL 1137
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIV 843
KKEVE Q+P K E++I C +S Q+ LY ++ ++N ++
Sbjct: 1138 KKEVEKQMPKKYEHVITCRLSNRQRYLYEDFMSRA------KTRETLQTGNLLSVINVLM 1191
Query: 844 QLRKLCNHPFMFQ 856
QLRK+CNHP MF+
Sbjct: 1192 QLRKVCNHPNMFE 1204
Score = 424 (154.3 bits), Expect = 7.5e-98, Sum P(5) = 7.5e-98
Identities = 83/191 (43%), Positives = 121/191 (63%)
Query: 882 GKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLL 941
GK + +DR+L +LK GHRVL+F QMT+++++LE + +Y G Y+RLDG+T+ E R L+
Sbjct: 1658 GKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILM 1717
Query: 942 KKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 1001
++FN D F F+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1718 ERFNG-DKRIFCFILSTRSGGVGINLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDV 1776
Query: 1002 RVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDE 1061
+ RL++ ++E IL A K + + I+ G F S + L T+ + +E
Sbjct: 1777 HIYRLVSERTIEVNILKKANQKRMLSDMAIEGGNFTTTYFKSSTIKDLFTMEQSEQDESS 1836
Query: 1062 EENAVPDDETV 1072
+E + D V
Sbjct: 1837 QEKSENKDRIV 1847
Score = 55 (24.4 bits), Expect = 7.5e-98, Sum P(5) = 7.5e-98
Identities = 32/144 (22%), Positives = 60/144 (41%)
Query: 177 GHISSQIKQSK-LTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRV 235
G SS KQ K L + P L PL Q+++ A N S++S+ E +
Sbjct: 69 GIASSSSKQQKQLASAQLPVPLSPLP-QQQQQTAEATAAAAAPAHSNVSVSSSTIEASVL 127
Query: 236 KAEIELRALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGL-----KEARAT 290
+ + + L N R A ++ A + + + ++ GL ++ A
Sbjct: 128 PPQAKRQRLDD-NEDRTSAASIVGPAESSNIVSSLLPASVASSSEVGGLSSTALQDLNAL 186
Query: 291 EKLEKQQKVEAERKKRQKHQEYIT 314
+K QQK++ R +++H E ++
Sbjct: 187 KKRILQQKLQILRNLKERHLENVS 210
Score = 44 (20.5 bits), Expect = 1.4e-32, Sum P(4) = 1.4e-32
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 369 AEDEEGYRKLIDQKKDKRLAFL 390
AED ++LI +K++RLA L
Sbjct: 1489 AEDPYKVQELIQMRKEQRLAAL 1510
Score = 41 (19.5 bits), Expect = 7.5e-98, Sum P(5) = 7.5e-98
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 381 QKKDKRLAFLLSQTDEYISNL 401
Q D+ L+F++ QT+++ L
Sbjct: 610 QALDQHLSFIVDQTEKFSQQL 630
Score = 39 (18.8 bits), Expect = 7.5e-98, Sum P(5) = 7.5e-98
Identities = 6/35 (17%), Positives = 21/35 (60%)
Query: 1076 LARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELP 1110
L + ++ Q Q++ +++++Q ++ + + +LP
Sbjct: 2355 LPQQQQPQQVVQQVQQQQQQQQQQQQQQVVQQQLP 2389
Score = 39 (18.8 bits), Expect = 8.1e-58, Sum P(5) = 8.1e-58
Identities = 19/99 (19%), Positives = 45/99 (45%)
Query: 989 QDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQ--KSTGSERH 1046
QD + + +N+ R++ T++ ++ + L E + A +Q ++T + +
Sbjct: 1832 QDESSQEKSENKDRIVATTTLSDTPSTVVETEKQSLRAFEHALAAAEDEQDVQATKTAKA 1891
Query: 1047 QFLQTILHQDDEEDEEENAVPDDETVNQM-LARSEEEFQ 1084
+ + L + DE P+ E Q+ L++++ E Q
Sbjct: 1892 E-VAADLAEFDENIPIATEDPNAEGGPQVELSKADLEMQ 1929
Score = 37 (18.1 bits), Expect = 5.6e-96, Sum P(5) = 5.6e-96
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 111 ARNQPLTPQLAMGVQGKRMEGVPSG 135
A+NQ T Q V+ + G+ +G
Sbjct: 263 AQNQKYTTQQTDSVESSLVSGIGTG 287
Score = 37 (18.1 bits), Expect = 3.3e-58, Sum P(4) = 3.3e-58
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 1059 EDEEENAVPDDETVNQMLA-RSEEEFQTYQRIDAERRK 1095
E EEE D V +++ R E+ +R+ R+
Sbjct: 1482 EPEEETEAEDPYKVQELIQMRKEQRLAALKRMAMINRR 1519
>MGI|MGI:1924001 [details] [associations]
symbol:Chd9 "chromodomain helicase DNA binding protein 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
MGI:MGI:1924001 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077 CTD:80205
KO:K14438 OMA:MWGHQTA EMBL:DQ127229 EMBL:AK034446 EMBL:AK039562
EMBL:AK084000 EMBL:AB093226 EMBL:BC052896 IPI:IPI00229650
IPI:IPI00758139 RefSeq:NP_796198.1 UniGene:Mm.100615
ProteinModelPortal:Q8BYH8 SMR:Q8BYH8 STRING:Q8BYH8
PhosphoSite:Q8BYH8 PaxDb:Q8BYH8 PRIDE:Q8BYH8
Ensembl:ENSMUST00000048665 Ensembl:ENSMUST00000109614 GeneID:109151
KEGG:mmu:109151 UCSC:uc009msf.2 UCSC:uc009msi.2 InParanoid:Q8BYH8
OrthoDB:EOG4548XQ ChiTaRS:CHD9 NextBio:361700 Bgee:Q8BYH8
CleanEx:MM_CHD9 Genevestigator:Q8BYH8 Uniprot:Q8BYH8
Length = 2885
Score = 974 (347.9 bits), Expect = 9.9e-98, Sum P(2) = 9.9e-98
Identities = 237/621 (38%), Positives = 357/621 (57%)
Query: 547 EQASILVNG-KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKV 605
EQ+ NG +L+EYQ++GL W++ + N N ILADEMGLGKTIQ+I + Y + +
Sbjct: 848 EQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEILLTGI 906
Query: 606 NGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ--------AQMK----A 653
GPFLII PLST++NW EF W +NVV Y GS R+ +Q +Q + A
Sbjct: 907 RGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGA 965
Query: 654 SKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLT 713
+F ++TT+E ++ G L + W+ +IIDE HR+KN +CKL L + H++LLT
Sbjct: 966 YRFQAIITTFEMILGGCGELNAIDWRCVIIDEAHRLKNKNCKLLEGLKLMNLE-HKVLLT 1024
Query: 714 GTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHK 773
GTPLQN + EL++LL+FL P F S STF Q F +L EE + ++L
Sbjct: 1025 GTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFG----------DLKTEEQV---QKLQA 1071
Query: 774 VLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXX 832
+L+P +LRRLK++VE +L K E II+ +++ +QK YR + K L+ G+
Sbjct: 1072 ILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGA-----GQ 1126
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLY-----RVSGKFELL 887
L+NT+++LRK CNHP++ + EEK + S D + + +GK L+
Sbjct: 1127 TNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPSASDFHLQAMIQSAGKLVLI 1186
Query: 888 DRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAP 947
D++LPK+K+ GH+VL+F QM + ++ILEDY ++ + Y R+DG + R + +F+ P
Sbjct: 1187 DKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKP 1246
Query: 948 DSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLM 1007
DS+ F+F+L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+
Sbjct: 1247 DSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLV 1306
Query: 1008 TVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQF----LQTILHQDDE----E 1059
T NS E + A KL +D+ V+Q+ M + S S Q ++ +L + E
Sbjct: 1307 TRNSYEREMFDRASLKLGLDKAVLQS-MSGRDSNVSGIQQLSKKEIEDLLRRGAYGAIME 1365
Query: 1060 DEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEE 1119
+E+E + +E ++Q+L R + I++E R K+ + D + +
Sbjct: 1366 EEDEGSKFCEEDIDQILLRRTKTIT----IESEGRGSTFAKASFVASGNRTDISLDDPNF 1421
Query: 1120 IEQWAFEAKEEEKALHMGRGS 1140
++WA +A+ + + GR S
Sbjct: 1422 WQKWAKKAELDIDTIS-GRNS 1441
Score = 48 (22.0 bits), Expect = 9.9e-98, Sum P(2) = 9.9e-98
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 284 LKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQAR---IMRLNKA 340
LKE K+E+ ++++A R + + + + + +EY NQ R + LN
Sbjct: 811 LKEDVDLAKIEEFEQLQASRPDTRHLDRPPSNIWKKIEQSREYKNGNQLREYQLEGLNWL 870
Query: 341 VMNYH 345
+ N++
Sbjct: 871 LFNWY 875
Score = 39 (18.8 bits), Expect = 8.8e-97, Sum P(2) = 8.8e-97
Identities = 8/25 (32%), Positives = 18/25 (72%)
Query: 279 TKRQGLKEARATEKLEKQQKVEAER 303
T++Q LK+ R +K+++ + +A+R
Sbjct: 731 TEQQLLKDKRIQQKIKRFKLRQAQR 755
>DICTYBASE|DDB_G0292358 [details] [associations]
symbol:ino80 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0031011 "Ino80 complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
dictyBase:DDB_G0292358 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0003677 GO:GO:0006281 GO:GO:0016887 GO:GO:0006338
GO:GO:0006366 GO:GO:0031011 GO:GO:0004386 EMBL:AAFI02000189
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_629681.1 ProteinModelPortal:Q54DG0
STRING:Q54DG0 PRIDE:Q54DG0 EnsemblProtists:DDB0233012
GeneID:8628597 KEGG:ddi:DDB_G0292358 InParanoid:Q54DG0 OMA:MINILED
ProtClustDB:CLSZ2497087 Uniprot:Q54DG0
Length = 2129
Score = 639 (230.0 bits), Expect = 1.2e-97, Sum P(4) = 1.2e-97
Identities = 130/323 (40%), Positives = 201/323 (62%)
Query: 547 EQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVN 606
+Q +IL N LK YQ+KG+ W+V+L++ +NGILADEMGLGKTIQ+IA++ +L E+K +
Sbjct: 1153 KQPTIL-NADLKPYQLKGMTWIVNLYDQGINGILADEMGLGKTIQSIAVLAHLAEEKNIW 1211
Query: 607 GPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASK-------FNVL 659
GPFLI+ P STL NW EF ++ P+ V+ Y G+ R T++ K F+VL
Sbjct: 1212 GPFLIVTPKSTLHNWKNEFAKFVPAFKVIPYWGTQQQRTTIRKYWNPKKLYHRNSPFHVL 1271
Query: 660 LTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQN 719
+T+Y +++D+ +L W+YM++DE H +K+ L +F +RLLLTGTP+QN
Sbjct: 1272 ITSYNVIVRDEKYFHRLRWQYMVLDEAHAIKSSASNRWKTLMSFNCR-NRLLLTGTPIQN 1330
Query: 720 KLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTG-EKVELNEEETILIIRRLHKVLRPF 778
+ ELWALL+F++P+ F S F +WF+ + LNE + + RLH +L+PF
Sbjct: 1331 SMAELWALLHFIMPTFFDSHDEFAEWFSKDIENHAMSQGGLNEHQ----LNRLHMILKPF 1386
Query: 779 LLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTD--GSEXXXXXXXXXX 836
+LRR+K++VE+++P K E + C+++ QK LY+ + + I +T+ G
Sbjct: 1387 MLRRIKRDVENEMPSKTEVEVYCNLTHRQKKLYQSIRSN-ISITELLGG-ASFSEQGSMK 1444
Query: 837 XLMNTIVQLRKLCNHPFMFQNIE 859
LMN ++Q RK+CNHP F+ E
Sbjct: 1445 ALMNFVMQFRKVCNHPETFKRSE 1467
Score = 435 (158.2 bits), Expect = 1.2e-97, Sum P(4) = 1.2e-97
Identities = 86/189 (45%), Positives = 128/189 (67%)
Query: 881 SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL 940
SGK ++LD++L LK GHRVL++ Q T+++NILED+ +R +KY+RLDG++K +DR D+
Sbjct: 1766 SGKLQVLDKLLKDLKVGGHRVLIYSQFTKMINILEDFMIFRKYKYLRLDGSSKLDDRRDM 1825
Query: 941 LKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 1000
+ F + D F F+LSTRA G+G+NL +ADTVI +DSDWNP D QAQDRAHR+GQ
Sbjct: 1826 VDDFQS-DPSIFAFLLSTRACGIGINLTSADTVIFYDSDWNPTVDEQAQDRAHRLGQTRP 1884
Query: 1001 VRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSER---HQFLQTILHQDD 1057
V V RL+T N++EE+IL A+ K + VI G F+ ++ ++ + +L D+
Sbjct: 1885 VTVYRLITKNTIEEKILKRAKQKHQIQSIVIAGGKFESNPEELDQVGENEAISFLLDDDE 1944
Query: 1058 EEDEEENAV 1066
E+ +N +
Sbjct: 1945 LEERFKNQI 1953
Score = 47 (21.6 bits), Expect = 1.2e-97, Sum P(4) = 1.2e-97
Identities = 16/75 (21%), Positives = 36/75 (48%)
Query: 237 AEIELRALKVLNFQRQLRAEVIACAR-RDTTLETAVNVKAYKRTKRQGLKEARATEKLEK 295
A++ R LK+ N Q+ +A R + E + + + +R+ + A E ++
Sbjct: 919 AQMMKRELKIKN-QKPPKATKDNQIRAKKLVKEMGAYWRKFDKDEREAKRRAEKEEANQR 977
Query: 296 QQKVEAERKKRQKHQ 310
+++ E + KRQ+ +
Sbjct: 978 KREEEVQEAKRQQRK 992
Score = 46 (21.3 bits), Expect = 4.7e-57, Sum P(4) = 4.7e-57
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 1274 EDGKYSSVDELQKDFKTLCRNAQIYNEELSLIH--EDSVV 1311
+ GK +D+L KD K IY++ +I+ ED ++
Sbjct: 1765 DSGKLQVLDKLLKDLKVGGHRVLIYSQFTKMINILEDFMI 1804
Score = 44 (20.5 bits), Expect = 7.6e-57, Sum P(4) = 7.6e-57
Identities = 16/87 (18%), Positives = 41/87 (47%)
Query: 1029 KVIQAGMFDQK--STGSERHQFLQTILH--QDDEEDEEENAVPDDETVNQMLARSEEEFQ 1084
++I ++K ++HQ ++ + + EE + V ++E ++ +L E E +
Sbjct: 1889 RLITKNTIEEKILKRAKQKHQIQSIVIAGGKFESNPEELDQVGENEAISFLLDDDELEER 1948
Query: 1085 TYQRID-AERRKEQGKKSRLIEVSELP 1110
+ID A +K + + + +++ P
Sbjct: 1949 FKNQIDPATGKKRKQPEPEVPSIADKP 1975
Score = 42 (19.8 bits), Expect = 1.2e-97, Sum P(4) = 1.2e-97
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 381 QKKDKRLAFLLSQTDEY 397
+++ ++L FL+SQT+ Y
Sbjct: 987 KRQQRKLNFLISQTELY 1003
Score = 42 (19.8 bits), Expect = 1.7e-34, Sum P(3) = 1.7e-34
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 310 QEYITTVLQHCKDFKEYHRNNQARIM 335
Q+ TT+ ++ K YHRN+ ++
Sbjct: 1246 QQQRTTIRKYWNPKKLYHRNSPFHVL 1271
Score = 40 (19.1 bits), Expect = 1.8e-97, Sum P(3) = 1.8e-97
Identities = 9/40 (22%), Positives = 21/40 (52%)
Query: 58 QRAIDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQV 97
+ A +E+ ++E R Q+ + ++TE+ F S ++
Sbjct: 972 EEANQRKREEEVQEAKRQQRKLNFLISQTELYSHFMSKKL 1011
>UNIPROTKB|Q3L8U1 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_111217 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0006355 GO:GO:0044281
GO:GO:0003677 GO:GO:0044255 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:AY243500 EMBL:DQ333316
EMBL:AY647157 EMBL:AC007906 EMBL:AC079416 EMBL:BC140815
EMBL:AB002306 EMBL:AF150735 EMBL:AK022582 IPI:IPI00383105
IPI:IPI00746795 IPI:IPI00914955 RefSeq:NP_079410.4 UniGene:Hs.59159
UniGene:Hs.622347 ProteinModelPortal:Q3L8U1 SMR:Q3L8U1
IntAct:Q3L8U1 STRING:Q3L8U1 PhosphoSite:Q3L8U1 DMDM:215273951
PaxDb:Q3L8U1 PRIDE:Q3L8U1 Ensembl:ENST00000398510
Ensembl:ENST00000447540 Ensembl:ENST00000564845
Ensembl:ENST00000566029 GeneID:80205 KEGG:hsa:80205 UCSC:uc002egy.3
UCSC:uc002ehb.3 UCSC:uc002ehc.3 CTD:80205 GeneCards:GC16P053041
HGNC:HGNC:25701 neXtProt:NX_Q3L8U1 PharmGKB:PA128394727
InParanoid:Q3L8U1 KO:K14438 OMA:MWGHQTA GenomeRNAi:80205
NextBio:70576 ArrayExpress:Q3L8U1 Bgee:Q3L8U1 CleanEx:HS_CHD9
Genevestigator:Q3L8U1 GermOnline:ENSG00000177200 Uniprot:Q3L8U1
Length = 2897
Score = 975 (348.3 bits), Expect = 1.3e-97, Sum P(2) = 1.3e-97
Identities = 233/620 (37%), Positives = 359/620 (57%)
Query: 547 EQASILVNG-KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKV 605
+Q+ NG +L+EYQ++GL W++ + N N ILADEMGLGKTIQ+I + Y + +
Sbjct: 849 DQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEILLTGI 907
Query: 606 NGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ--------AQMK----A 653
GPFLII PLST++NW EF W +NVV Y GS R+ +Q +Q + A
Sbjct: 908 RGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGA 966
Query: 654 SKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLT 713
+F ++TT+E ++ G L + W+ +IIDE HR+KN +CKL L + H++LLT
Sbjct: 967 YRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLE-HKVLLT 1025
Query: 714 GTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHK 773
GTPLQN + EL++LL+FL P F S STF Q F +L EE + ++L
Sbjct: 1026 GTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFG----------DLKTEEQV---QKLQA 1072
Query: 774 VLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXX 832
+L+P +LRRLK++VE +L K E II+ +++ +QK YR + K L+ G+
Sbjct: 1073 ILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGA-----GQ 1127
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLY-----RVSGKFELL 887
L+NT+++LRK CNHP++ + EEK + + D + + +GK L+
Sbjct: 1128 TNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLI 1187
Query: 888 DRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAP 947
D++LPK+K+ GH+VL+F QM + ++ILEDY ++ + Y R+DG + R + +F+ P
Sbjct: 1188 DKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKP 1247
Query: 948 DSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLM 1007
DS+ F+F+L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+
Sbjct: 1248 DSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLV 1307
Query: 1008 TVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERH---QFLQTILHQDDE----ED 1060
T NS E + A KL +D+ V+Q+ + + G + + ++ +L + E+
Sbjct: 1308 TRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEE 1367
Query: 1061 EEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEI 1120
E+E + +E ++Q+L R + I++E R K+ + D + +
Sbjct: 1368 EDEGSKFCEEDIDQILLRRTKTIT----IESEGRGSTFAKASFVASGNRTDISLDDPNFW 1423
Query: 1121 EQWAFEAKEEEKALHMGRGS 1140
++WA +A+ + +A+ GR S
Sbjct: 1424 QKWAKKAEIDIEAIS-GRNS 1442
Score = 46 (21.3 bits), Expect = 1.3e-97, Sum P(2) = 1.3e-97
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 279 TKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIM 335
TK Q + +EK ++++KVE+E K++K I+ + K+ E N R+M
Sbjct: 498 TKLQNTQVRVMSEK-KQRKKVESE-SKQEKANRIISEAIAKAKERGE---RNIPRVM 549
Score = 46 (21.3 bits), Expect = 1.3e-97, Sum P(2) = 1.3e-97
Identities = 14/65 (21%), Positives = 31/65 (47%)
Query: 284 LKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQAR---IMRLNKA 340
LKE K+E+ ++++A R ++ + + + ++Y NQ R + LN
Sbjct: 812 LKEDVDLAKIEEFEQLQASRPDTRRLDRPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWL 871
Query: 341 VMNYH 345
+ N++
Sbjct: 872 LFNWY 876
Score = 41 (19.5 bits), Expect = 4.3e-97, Sum P(2) = 4.3e-97
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 245 KVLNFQRQLRAEVIACARRDTTLETAVNVKAYK------RTKRQGLKEARATEKLEKQQK 298
K+L+ R ++ E+ DT E V K Y T+ Q LK+ R +K+++ +
Sbjct: 694 KILS-SRTVKKEISPGVMIDTE-EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKL 751
Query: 299 VEAER 303
+A+R
Sbjct: 752 RQAQR 756
>UNIPROTKB|E2RDK8 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AAEX03001603
EMBL:AAEX03001604 EMBL:AAEX03001605 Ensembl:ENSCAFT00000015413
Uniprot:E2RDK8
Length = 2902
Score = 975 (348.3 bits), Expect = 1.3e-97, Sum P(2) = 1.3e-97
Identities = 233/620 (37%), Positives = 359/620 (57%)
Query: 547 EQASILVNG-KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKV 605
+Q+ NG +L+EYQ++GL W++ + N N ILADEMGLGKTIQ+I + Y + +
Sbjct: 851 DQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEILLTGI 909
Query: 606 NGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ--------AQMK----A 653
GPFLII PLST++NW EF W +NVV Y GS R+ +Q +Q + A
Sbjct: 910 RGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGA 968
Query: 654 SKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLT 713
+F ++TT+E ++ G L + W+ +IIDE HR+KN +CKL L + H++LLT
Sbjct: 969 YRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLE-HKVLLT 1027
Query: 714 GTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHK 773
GTPLQN + EL++LL+FL P F S STF Q F +L EE + ++L
Sbjct: 1028 GTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFG----------DLKTEEQV---QKLQA 1074
Query: 774 VLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXX 832
+L+P +LRRLK++VE +L K E II+ +++ +QK YR + K L+ G+
Sbjct: 1075 ILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGA-----GQ 1129
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLY-----RVSGKFELL 887
L+NT+++LRK CNHP++ + EEK + + D + + +GK L+
Sbjct: 1130 TNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLI 1189
Query: 888 DRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAP 947
D++LPK+K+ GH+VL+F QM + ++ILEDY ++ + Y R+DG + R + +F+ P
Sbjct: 1190 DKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKP 1249
Query: 948 DSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLM 1007
DS+ F+F+L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+
Sbjct: 1250 DSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLV 1309
Query: 1008 TVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERH---QFLQTILHQDDE----ED 1060
T NS E + A KL +D+ V+Q+ + + G + + ++ +L + E+
Sbjct: 1310 TRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEE 1369
Query: 1061 EEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEI 1120
E+E + +E ++Q+L R + I++E R K+ + D + +
Sbjct: 1370 EDEGSKFCEEDIDQILLRRTKTIT----IESEGRGSTFAKASFVASGNRTDISLDDPNFW 1425
Query: 1121 EQWAFEAKEEEKALHMGRGS 1140
++WA +A+ + A++ GR S
Sbjct: 1426 QKWAKKAEIDIDAIN-GRNS 1444
Score = 46 (21.3 bits), Expect = 1.3e-97, Sum P(2) = 1.3e-97
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 279 TKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIM 335
TK Q + +EK ++++KVE+E K++K I+ + K+ E N R+M
Sbjct: 500 TKLQNTQVRIMSEK-KQRKKVESE-SKQEKANRIISEAIAKAKERGE---RNIPRVM 551
Score = 41 (19.5 bits), Expect = 4.3e-97, Sum P(2) = 4.3e-97
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 245 KVLNFQRQLRAEVIACARRDTTLETAVNVKAYK------RTKRQGLKEARATEKLEKQQK 298
K+L+ R ++ EV DT E V K Y T++Q LK+ R +K+++ +
Sbjct: 696 KILS-SRIVKKEVSPGVMIDTE-EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKL 753
Query: 299 VEAER 303
+A+R
Sbjct: 754 RQAQR 758
Score = 40 (19.1 bits), Expect = 5.5e-97, Sum P(2) = 5.5e-97
Identities = 14/65 (21%), Positives = 28/65 (43%)
Query: 284 LKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQAR---IMRLNKA 340
LKE K+E+ + ++A R + + + ++Y NQ R + LN
Sbjct: 814 LKEDVDLAKIEEFEHLQASRPDTRHLDRPPANIWKKIDQSRDYKNGNQLREYQLEGLNWL 873
Query: 341 VMNYH 345
+ N++
Sbjct: 874 LFNWY 878
Score = 37 (18.1 bits), Expect = 1.1e-96, Sum P(2) = 1.1e-96
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 274 KAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQE 311
K KR K + E TE++ + E + +KR+ +++
Sbjct: 605 KKQKR-KNESSDEISDTEQMPQHACKEEDSQKRRSNRQ 641
>SGD|S000002742 [details] [associations]
symbol:SWR1 "Swi2/Snf2-related ATPase structural component of
the SWR1 complex" species:4932 "Saccharomyces cerevisiae"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IGI;IMP;IDA] [GO:0005198 "structural molecule
activity" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SGD:S000002742 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
GO:GO:0005198 EMBL:BK006938 GO:GO:0006351 GO:GO:0000812
GO:GO:0004386 GO:GO:0043486 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:U51032 KO:K11681 HOGENOM:HOG000186095 OrthoDB:EOG49S9FK
PIR:S70099 RefSeq:NP_010621.1 ProteinModelPortal:Q05471 SMR:Q05471
DIP:DIP-2845N IntAct:Q05471 MINT:MINT-1165514 STRING:Q05471
PaxDb:Q05471 EnsemblFungi:YDR334W GeneID:851934 KEGG:sce:YDR334W
CYGD:YDR334w OMA:APGFKVL NextBio:970001 Genevestigator:Q05471
GermOnline:YDR334W Uniprot:Q05471
Length = 1514
Score = 644 (231.8 bits), Expect = 1.5e-97, Sum P(2) = 1.5e-97
Identities = 139/341 (40%), Positives = 196/341 (57%)
Query: 529 MEEATYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGK 588
+EE + +V L+ G L+ YQ +GL W+ SL+NN+ NGILADEMGLGK
Sbjct: 668 VEEDAETKVQEEQLSVVDVPVPSLLRGNLRTYQKQGLNWLASLYNNHTNGILADEMGLGK 727
Query: 589 TIQTIALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ 648
TIQTI+L+ YL +K+ GP LI+VP S L NW +EF+R+AP V+ Y GSP RK +
Sbjct: 728 TIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRKEKR 787
Query: 649 AQM-KASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAP 707
K F+V + +Y+ V++D+ + W+YM++DE H +KN L F
Sbjct: 788 KGWNKPDAFHVCIVSYQLVVQDQHSFKRKRWQYMVLDEAHNIKNFRSTRWQALLNFNTQ- 846
Query: 708 HRLLLTGTPLQNKLPELWALLNFLLP---------SIFKSVSTFEQWFNAP---FATTGE 755
RLLLTGTPLQN L ELW+LL FL+P S F + F+QWF P TG+
Sbjct: 847 RRLLLTGTPLQNNLAELWSLLYFLMPQTVIDGKKVSGFADLDAFQQWFGRPVDKIIETGQ 906
Query: 756 KVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMH 815
++ET + +LH+VLRP+LLRRLK +VE Q+P K E+I+ C +S Q+ LY
Sbjct: 907 NFG-QDKETKKTVAKLHQVLRPYLLRRLKADVEKQMPAKYEHIVYCKLSKRQRFLYDDFM 965
Query: 816 TKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQ 856
++ ++N ++QLRK+CNHP +F+
Sbjct: 966 SRA------QTKATLASGNFMSIVNCLMQLRKVCNHPNLFE 1000
Score = 414 (150.8 bits), Expect = 1.5e-97, Sum P(2) = 1.5e-97
Identities = 89/208 (42%), Positives = 126/208 (60%)
Query: 882 GKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLL 941
GK + L +L +LK GHR L+F QMT+++++LE + +Y G+ YMRLDG TK EDR L
Sbjct: 1246 GKLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQFLNYHGYLYMRLDGATKIEDRQILT 1305
Query: 942 KKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 1001
++FN DS +F+LS+R+GGLG+NL ADTVI +DSDWNP D Q QDR HRIGQ +V
Sbjct: 1306 ERFNT-DSRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDV 1364
Query: 1002 RVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMF--DQKSTGSERHQFLQTILHQDDEE 1059
+ R ++ +++E IL A K +D VIQ G F D S S R +
Sbjct: 1365 HIYRFVSEHTIESNILKKANQKRQLDNVVIQEGDFTTDYFSKLSVRDLLGSELPENASGG 1424
Query: 1060 D-----EEENAVPDDETVNQMLARSEEE 1082
D + + A D + ++LA++E+E
Sbjct: 1425 DKPLIADADVAAKDPRQLERLLAQAEDE 1452
>UNIPROTKB|E2QUR1 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AAEX03009852
Ensembl:ENSCAFT00000009072 Uniprot:E2QUR1
Length = 2200
Score = 956 (341.6 bits), Expect = 1.9e-97, Sum P(3) = 1.9e-97
Identities = 233/631 (36%), Positives = 357/631 (56%)
Query: 556 KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVPL 615
+L+EYQ++G+ W++ + N N ILADEMGLGKTIQ+IA + + ++GPFL+I PL
Sbjct: 427 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPL 485
Query: 616 STLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA-QMK-----------ASKFNVLLTTY 663
ST++NW EF W +N + Y GS R+ +Q +M A KF+ L+TT+
Sbjct: 486 STITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTF 544
Query: 664 EYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPE 723
E ++ D L ++ W+ +IIDE HR+KN +CKL L + H++LLTGTPLQN + E
Sbjct: 545 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLE-HKVLLTGTPLQNTVEE 603
Query: 724 LWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 783
L++LL+FL PS F S S F + F +L EE + ++L +L+P +LRRL
Sbjct: 604 LFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAILKPMMLRRL 650
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMNTI 842
K++VE L K E II+ +++ +QK YR + K L+ G+ L+NT+
Sbjct: 651 KEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGA-----GHTNMPNLLNTM 705
Query: 843 VQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLY-----RVSGKFELLDRILPKLKST 897
++LRK CNHP++ EEK + + D + R +GK L+D++LPKLK+
Sbjct: 706 MELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAG 765
Query: 898 GHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLS 957
GH+VL+F QM + ++ILEDY R + Y R+DG + R + +F+ PDS+ F+F+L
Sbjct: 766 GHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 825
Query: 958 TRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERIL 1017
TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+T NS E +
Sbjct: 826 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 885
Query: 1018 AAARYKLNMDEKVIQA-GMFDQKSTGSERH--QFLQTILHQDDE----EDEEENAVPDDE 1070
A KL +D+ V+Q+ D TG ++ + ++ +L + E+++E + +E
Sbjct: 886 DKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDEGSKFCEE 945
Query: 1071 TVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEE 1130
++Q+L R T I++E + K+ + D + + ++WA +A +
Sbjct: 946 DIDQILLRRT----TTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKKADLD 1001
Query: 1131 EKALHMGRG-----SRQRKQVDYTDSLTEKE 1156
L+ R RKQ + +L + +
Sbjct: 1002 MDLLNSKNNLVIDTPRVRKQTRHFSTLKDDD 1032
Score = 45 (20.9 bits), Expect = 1.9e-97, Sum P(3) = 1.9e-97
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 69 LEEDPR-YQKLIEMKANRTEIKHAF 92
LE+D R +QKL K +++H F
Sbjct: 305 LEKDKRIHQKLKRFKTKMAQMRHFF 329
Score = 44 (20.5 bits), Expect = 7.0e-96, Sum P(2) = 7.0e-96
Identities = 24/103 (23%), Positives = 43/103 (41%)
Query: 207 ENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQR--QLRAEVIA-CARR 263
ENR L +++ E+ N + + R +A E +VLN +R E RR
Sbjct: 65 ENR-RLEHQKKQEKANRIVAEAIA---RARARGEQNIPRVLNEDELPSVRPEEEGEKKRR 120
Query: 264 DTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKR 306
+ + + K++K G + + KL V +++KR
Sbjct: 121 KKSSGERLKEEKPKKSKTSGTSKTKGKSKLNTITPVVGKKRKR 163
Score = 41 (19.5 bits), Expect = 1.9e-97, Sum P(3) = 1.9e-97
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 280 KRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNN--QARIMRL 337
KR +A A +KLE + + + R+ E + +L F Y+R N A M L
Sbjct: 403 KRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLL-----FNWYNRQNCILADEMGL 457
Query: 338 NKAVMN 343
K + +
Sbjct: 458 GKTIQS 463
Score = 40 (19.1 bits), Expect = 1.8e-95, Sum P(2) = 1.8e-95
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 283 GLKEARATEKLEKQQKV-----EAERKKRQKHQEYITTVL 317
G++E R E +KQ+K EA + R + ++ I VL
Sbjct: 62 GMEENRRLEHQKKQEKANRIVAEAIARARARGEQNIPRVL 101
>UNIPROTKB|E1BDZ3 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:DAAA02046444
IPI:IPI00705152 Ensembl:ENSBTAT00000002955 Uniprot:E1BDZ3
Length = 2900
Score = 973 (347.6 bits), Expect = 2.1e-97, Sum P(2) = 2.1e-97
Identities = 233/620 (37%), Positives = 358/620 (57%)
Query: 547 EQASILVNG-KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKV 605
+Q+ NG +L+EYQ++GL W++ + N N ILADEMGLGKTIQ+I + Y + +
Sbjct: 850 DQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEILLTGI 908
Query: 606 NGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ--------AQMK----A 653
GPFLII PLST++NW EF W +NVV Y GS R+ +Q +Q + A
Sbjct: 909 RGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGA 967
Query: 654 SKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLT 713
+F ++TT+E ++ G L + W+ +IIDE HR+KN +CKL L + H++LLT
Sbjct: 968 YRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLE-HKVLLT 1026
Query: 714 GTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHK 773
GTPLQN + EL++LL+FL P F S STF Q F +L EE + ++L
Sbjct: 1027 GTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFG----------DLKTEEQV---QKLQA 1073
Query: 774 VLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXX 832
+L+P +LRRLK++VE +L K E II+ +++ +QK YR + K L+ G+
Sbjct: 1074 ILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGA-----GQ 1128
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLY-----RVSGKFELL 887
L+NT+++LRK CNHP++ + EEK + + D + + +GK L+
Sbjct: 1129 TNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLI 1188
Query: 888 DRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAP 947
D++LPK+K+ GH+VL+F QM + ++ILEDY ++ + Y R+DG + R + +F+ P
Sbjct: 1189 DKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKP 1248
Query: 948 DSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLM 1007
DS+ F+F+L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+
Sbjct: 1249 DSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLV 1308
Query: 1008 TVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERH---QFLQTILHQDDE----ED 1060
T NS E + A KL +D+ V+Q+ + + G + + ++ +L + E+
Sbjct: 1309 TRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEE 1368
Query: 1061 EEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEI 1120
E+E + +E ++Q+L R + I++E R K+ + D + +
Sbjct: 1369 EDEGSKFCEEDIDQILLRRTKTIT----IESEGRGSTFAKASFVASGNRTDISLDDPNFW 1424
Query: 1121 EQWAFEAKEEEKALHMGRGS 1140
++WA +A+ + A+ GR S
Sbjct: 1425 QKWAKKAEIDIDAIS-GRNS 1443
Score = 46 (21.3 bits), Expect = 2.1e-97, Sum P(2) = 2.1e-97
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 279 TKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIM 335
TK Q + +EK ++++KVE+E K++K I+ + K+ E N R+M
Sbjct: 499 TKLQNTQVRIMSEK-KQRKKVESE-SKQEKANRIISEAIAKAKERGE---RNIPRVM 550
Score = 45 (20.9 bits), Expect = 2.7e-97, Sum P(2) = 2.7e-97
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 245 KVLNFQRQLRAEVIACARRDTTLETAVNVKAYK------RTKRQGLKEARATEKLEKQQK 298
K+L+ R ++ E+ + DT E V K Y T++Q LK+ R +K+++ +
Sbjct: 695 KILS-SRTIKKEISSGVMIDTE-EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKL 752
Query: 299 VEAER 303
+A+R
Sbjct: 753 RQAQR 757
Score = 41 (19.5 bits), Expect = 7.1e-97, Sum P(2) = 7.1e-97
Identities = 14/65 (21%), Positives = 29/65 (44%)
Query: 284 LKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQAR---IMRLNKA 340
LKE K+E+ ++++A R + + + ++Y NQ R + LN
Sbjct: 813 LKEDVDLAKIEEFEQLQASRPDTRHLDRPPPNIWKKIDQSRDYKNGNQLREYQLEGLNWL 872
Query: 341 VMNYH 345
+ N++
Sbjct: 873 LFNWY 877
>DICTYBASE|DDB_G0293012 [details] [associations]
symbol:DDB_G0293012 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000626
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00213 SMART:SM00298
SMART:SM00490 dictyBase:DDB_G0293012 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
EMBL:AAFI02000199 InterPro:IPR022617 Pfam:PF11976
RefSeq:XP_629261.1 ProteinModelPortal:Q54CF8
EnsemblProtists:DDB0220643 GeneID:8628981 KEGG:ddi:DDB_G0293012
InParanoid:Q54CF8 OMA:IMINEDI Uniprot:Q54CF8
Length = 3071
Score = 945 (337.7 bits), Expect = 2.1e-97, Sum P(2) = 2.1e-97
Identities = 207/497 (41%), Positives = 293/497 (58%)
Query: 554 NGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIV 613
N LKE+Q++G W+ + + + +LADEMGLGKTIQ+IA + YL + + GPFL++
Sbjct: 895 NLSLKEFQVEGFLWLSYCWYHCRSSLLADEMGLGKTIQSIAFLQYLSQSVGIKGPFLVVA 954
Query: 614 PLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASK----FNVLLTTYEYVIKD 669
PLSTL NW E +W +V Y GS R + K F VLLTTYE ++ D
Sbjct: 955 PLSTLGNWHKEILKWTKMKTLVFY-GSQETRGFISKYEFKHKDTYLFEVLLTTYETIMSD 1013
Query: 670 KGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLN 729
++ W+ +I+DEGHR+KN K+ L + H ++LTGTPLQN + ELW +LN
Sbjct: 1014 HSSFVRVPWRALILDEGHRIKNDKSKVLSKLKSIKTE-HSIILTGTPLQNDMKELWTMLN 1072
Query: 730 FLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVES 789
FL P F S F E +L EE + +LH++L P+LLRR+K++VE
Sbjct: 1073 FLDPDKFNSCQEF----------LDEYSDLKEESQV---SKLHQLLSPYLLRRMKEDVEL 1119
Query: 790 QLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMNTIVQLRKL 848
+P K E +I+ ++S QK YR + + L+ G + L N ++Q+RK+
Sbjct: 1120 SIPIKEETVIQVELSSTQKTYYRAILERNREFLSRGIKQKTNLPK----LSNIMIQIRKV 1175
Query: 849 CNHPFMFQNIEEKF--SDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLFCQ 906
CNHPF+ EE + + G + G L + S K L+D++L +LK+ GH+VL+F Q
Sbjct: 1176 CNHPFLIPGAEESIVKQEKIAGDEEL-GELLVKSSSKLVLVDKLLQRLKAEGHQVLIFSQ 1234
Query: 907 MTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLN 966
M + +NILEDY YR + Y RLDG+ K+E R + +F + F+F+LSTRAGG+G+N
Sbjct: 1235 MVESLNILEDYLQYREYTYERLDGSIKSEVRQASIDRFQDKGANRFVFLLSTRAGGVGIN 1294
Query: 967 LQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNM 1026
L TADTVI+FDSDWNP DLQAQ R HRIGQ N V+V RL+T N+ EE + A KL +
Sbjct: 1295 LTTADTVILFDSDWNPQSDLQAQARCHRIGQTNNVKVYRLITRNTYEEYLFECATKKLLL 1354
Query: 1027 DEKVIQAGMFDQKSTGS 1043
D V+ D+K T +
Sbjct: 1355 DHIVLSTNK-DKKQTNT 1370
Score = 75 (31.5 bits), Expect = 2.1e-97, Sum P(2) = 2.1e-97
Identities = 23/101 (22%), Positives = 46/101 (45%)
Query: 1023 KLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDE-TVNQMLARSEE 1081
K+N+DEK + + + +DDE+ +++ DDE + + ++ +E
Sbjct: 1926 KVNVDEKSKDNEKSNDSEKSKDNEKSKDDEKSKDDEKSKDDEKSQDDEKSKDDEKSKDDE 1985
Query: 1082 EFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQ 1122
+ + + D E K+S+ SE IKE++E E+
Sbjct: 1986 KSKLEENQDESTPMEVDKESKSTSSSEKQSIEIKEEKESEK 2026
Score = 65 (27.9 bits), Expect = 2.4e-96, Sum P(2) = 2.4e-96
Identities = 27/100 (27%), Positives = 50/100 (50%)
Query: 1057 DEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKE 1116
D+ DE + V ++E VN E+ + D+E+ K+ +KS+ E S+ D K+
Sbjct: 1912 DKVDENKEKVENNEKVNV----DEKSKDNEKSNDSEKSKDN-EKSKDDEKSK-DDEKSKD 1965
Query: 1117 DEEIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKE 1156
DE+ Q ++K++EK+ + + Q + T +KE
Sbjct: 1966 DEK-SQDDEKSKDDEKSKDDEKSKLEENQDESTPMEVDKE 2004
Score = 55 (24.4 bits), Expect = 2.7e-95, Sum P(2) = 2.7e-95
Identities = 20/99 (20%), Positives = 47/99 (47%)
Query: 1050 QTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRK-EQGKKSRLIEVSE 1108
Q + + ++ E +++ D++ V + + + E+E + ++D + K E +K + E S+
Sbjct: 1876 QIKVEEKEKSTESKSSSNDEKDVCEKVEKGEKEISS-DKVDENKEKVENNEKVNVDEKSK 1934
Query: 1109 LPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVD 1147
D D E + ++K++EK+ + K D
Sbjct: 1935 --DNEKSNDSEKSKDNEKSKDDEKSKDDEKSKDDEKSQD 1971
Score = 53 (23.7 bits), Expect = 4.4e-95, Sum P(2) = 4.4e-95
Identities = 20/113 (17%), Positives = 51/113 (45%)
Query: 1023 KLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE--DEEENAVPDDETVNQMLARSE 1080
K+ EK I + D+ E ++ + D E ++ E + ++++ + ++ +
Sbjct: 1901 KVEKGEKEISSDKVDENKEKVENNEKVNVDEKSKDNEKSNDSEKSKDNEKSKDDEKSKDD 1960
Query: 1081 EEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKA 1133
E+ + ++ + + + +KS+ E S+L E+ + E E +E K+
Sbjct: 1961 EKSKDDEKSQDDEKSKDDEKSKDDEKSKL------EENQDESTPMEVDKESKS 2007
Score = 47 (21.6 bits), Expect = 1.9e-94, Sum P(2) = 1.9e-94
Identities = 28/117 (23%), Positives = 58/117 (49%)
Query: 1024 LNMD-EKVIQAG---MFDQKST------GSERHQFL--QTILHQD-DEEDEEENAVPDDE 1070
+N D +K+++ FD+K++ G + F +T ++ D ++E+ E +PD +
Sbjct: 1452 INEDIDKILERSTTIQFDEKNSKPSSLSGFSKATFASSETDMNVDMNDENFWEKVLPDYK 1511
Query: 1071 TVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWL-IKEDEEIEQWAFE 1126
TV Q+ EE+ + + +E +SR I V ++ D K+D+ ++ + E
Sbjct: 1512 TVKQL----EEKLASGSALQSE-------ESRAIFVQDILDLAQTKKDDVVDSVSIE 1557
Score = 42 (19.8 bits), Expect = 6.4e-94, Sum P(2) = 6.4e-94
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 1025 NMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVN 1073
N DE + KST S Q ++ ++ E+ ++N D+ T N
Sbjct: 1992 NQDESTPMEVDKESKSTSSSEKQSIEIKEEKESEKKPQDN---DNATEN 2037
>CGD|CAL0000831 [details] [associations]
symbol:orf19.1734 species:5476 "Candida albicans" [GO:0031011
"Ino80 complex" evidence=IEA] [GO:0042766 "nucleosome mobilization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0043486
"histone exchange" evidence=IEA] [GO:0006348 "chromatin silencing
at telomere" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
CGD:CAL0000831 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006281 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000298 EMBL:AACQ01000297
RefSeq:XP_710247.1 RefSeq:XP_710254.1 STRING:Q59KI4 GeneID:3648140
GeneID:3648148 KEGG:cal:CaO19.1734 KEGG:cal:CaO19.9302 KO:K11665
Uniprot:Q59KI4
Length = 1387
Score = 634 (228.2 bits), Expect = 3.2e-97, Sum P(4) = 3.2e-97
Identities = 134/334 (40%), Positives = 201/334 (60%)
Query: 543 EIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEK 602
+I Q ++L LKEYQ+KGL W+ +L+ +NGILADEMGLGKT+Q+I+++ YL E
Sbjct: 659 DITIPQPNML-KCTLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVLAYLAET 717
Query: 603 KKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQM--------KAS 654
+ GPFL++ P STL NW E ++ P V+ Y G+ RK L+ K S
Sbjct: 718 YNMWGPFLVVTPASTLHNWQQEITKFVPEFKVLPYWGNAKDRKILRKFWDRKSLRYDKDS 777
Query: 655 KFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHC-KLTHILNTFYVAPHRLLLT 713
F+VL+T+Y+ ++ D K+ W+YMI+DE +K+ + +LN +RLLLT
Sbjct: 778 PFHVLVTSYQLIVADIAYFQKMKWQYMILDEAQAIKSSSSSRWKSLLNL--TCRNRLLLT 835
Query: 714 GTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEK-VELNEEETILIIRRLH 772
GTP+QN + ELWALL+F++PSIF S F WF + + L+E++ +RRLH
Sbjct: 836 GTPIQNSMQELWALLHFIMPSIFDSHDEFSDWFAKDIESHAQSNTSLDEQQ----LRRLH 891
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK-GILLTDGSEXXXXX 831
+L+PF+LRR+KK V+S+L DKVE + CD++ QK LY+ + ++ + TD E
Sbjct: 892 MILKPFMLRRIKKNVQSELGDKVEIDVYCDLTTRQKKLYQQLRSQISMSDTDLLELESNS 951
Query: 832 XXXXXXLMNTIVQLRKLCNHPFMFQ--NIEEKFS 863
L N ++Q RK+CNHP +F+ ++ FS
Sbjct: 952 TSSDSSLANLVMQFRKVCNHPDLFERADVNSPFS 985
Score = 413 (150.4 bits), Expect = 3.2e-97, Sum P(4) = 3.2e-97
Identities = 79/151 (52%), Positives = 111/151 (73%)
Query: 881 SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL 940
SGK LD +L LK GHR+L++ QMT++M I E+Y +Y+ +KY+RLDG+T E R ++
Sbjct: 1235 SGKLAKLDELLIDLKRGGHRILIYFQMTRMMQIFEEYLAYKSYKYIRLDGSTTIESRREM 1294
Query: 941 LKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 1000
++ + + E FIF+LSTRAGGLGLNL +ADTVI +DSDWNP D QA DRAHRIGQ +
Sbjct: 1295 VQAWQT-NPEIFIFMLSTRAGGLGLNLTSADTVIFYDSDWNPTIDSQAMDRAHRIGQTKQ 1353
Query: 1001 VRVLRLMTVNSVEERILAAARYKLNMDEKVI 1031
V+V RL+T N++E++IL A+ K + + V+
Sbjct: 1354 VKVFRLVTRNTIEQKILERAKEKEEIQKLVV 1384
Score = 54 (24.1 bits), Expect = 3.2e-97, Sum P(4) = 3.2e-97
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 250 QRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKH 309
+R R +V A D LETA + ++ K K +T + K+ K+E +++++Q+H
Sbjct: 330 RRSSRPKVKRKAFEDE-LETADKQSSTQQVK----KSQESTGRDHKRVKIENKQEEQQQH 384
Query: 310 QE 311
Q+
Sbjct: 385 QQ 386
Score = 53 (23.7 bits), Expect = 4.4e-97, Sum P(3) = 4.4e-97
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 276 YKRTKR--QGLKEARATEKLEKQQKVEAERK-KRQKHQ 310
+KR +R + LK+ E L+K +K E ER+ KRQ +
Sbjct: 505 WKRNERLERDLKKKHEKELLDKAKKEEEEREAKRQSRK 542
Score = 50 (22.7 bits), Expect = 8.4e-97, Sum P(4) = 8.4e-97
Identities = 13/58 (22%), Positives = 28/58 (48%)
Query: 271 VNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHR 328
V ++ + ++Q ++ +A E+ E + + EAE+K + K+FK + R
Sbjct: 372 VKIENKQEEQQQHQQQQQADEEDEAEAEAEAEQKPKSGALSEAAAAGMTAKEFKAFMR 429
Score = 44 (20.5 bits), Expect = 3.2e-97, Sum P(4) = 3.2e-97
Identities = 17/73 (23%), Positives = 28/73 (38%)
Query: 369 AEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTXXXXXXXXXXXXXXXXXXXXXXXSVK 428
A+ EE R+ +++ ++L FL++QT+ Y S+
Sbjct: 527 AKKEEEEREA--KRQSRKLNFLITQTELY-SHFIGKKIKTDELEGTNADDNLKSNTKEHL 583
Query: 429 QKLMDTDGKVTLD 441
K D DG T D
Sbjct: 584 DKYADVDGSATHD 596
Score = 40 (19.1 bits), Expect = 2.7e-58, Sum P(4) = 2.7e-58
Identities = 16/51 (31%), Positives = 22/51 (43%)
Query: 1243 PFIKLPSRKELP----DYYEVIDRPMDIKKILGRIEDGKYSSVDELQKDFK 1289
P + P LP DY + MD + + E GK + +DEL D K
Sbjct: 1203 PLEQYPKSNMLPMPIFDYSNIRMPSMD--RFIA--ESGKLAKLDELLIDLK 1249
>RGD|1594200 [details] [associations]
symbol:LOC680231 "similar to chromodomain helicase DNA binding
protein 9" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:1594200 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 OrthoDB:EOG4548XQ IPI:IPI00957597
Ensembl:ENSRNOT00000018201 Uniprot:D3ZVE2
Length = 2881
Score = 968 (345.8 bits), Expect = 4.3e-97, Sum P(2) = 4.3e-97
Identities = 236/621 (38%), Positives = 357/621 (57%)
Query: 547 EQASILVNG-KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKV 605
+Q+ NG +L+EYQ++GL W++ + N N ILADEMGLGKTIQ+I + Y + +
Sbjct: 848 DQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEVLLTGI 906
Query: 606 NGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ--------AQMK----A 653
GPFLII PLST++NW EF W +NVV Y GS R+ +Q +Q + A
Sbjct: 907 RGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGA 965
Query: 654 SKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLT 713
+F ++TT+E ++ G L + W+ +IIDE HR+KN +CKL L + H++LLT
Sbjct: 966 YRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLE-HKVLLT 1024
Query: 714 GTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHK 773
GTPLQN + EL++LL+FL P F S STF Q F +L EE + ++L
Sbjct: 1025 GTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFG----------DLKTEEQV---QKLQA 1071
Query: 774 VLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXX 832
+L+P +LRRLK++VE +L K E II+ +++ +QK YR + K L+ G+
Sbjct: 1072 ILKPMMLRRLKEDVEKRLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGA-----GQ 1126
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLY-----RVSGKFELL 887
L+NT+++LRK CNHP++ + EEK + S D + + +GK L+
Sbjct: 1127 TNVPNLVNTMMELRKCCNHPYLIKGAEEKIIGEFRDTYNPSASDFHLQAMIQSAGKLVLI 1186
Query: 888 DRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAP 947
D++LPK+K+ GH+VL+F QM + ++ILEDY ++ + Y R+DG + R + +F+ P
Sbjct: 1187 DKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKP 1246
Query: 948 DSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLM 1007
DS+ F+F+L TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+
Sbjct: 1247 DSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLV 1306
Query: 1008 TVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQF----LQTILHQDDE----E 1059
T NS E + A KL +D+ V+Q+ M + S S Q ++ +L + E
Sbjct: 1307 TRNSYEREMFDRASLKLGLDKAVLQS-MSGRDSNVSGIQQLSKKEIEDLLRRGAYGAIME 1365
Query: 1060 DEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEE 1119
+E+E + +E ++Q+L R + I++E K+ + D + +
Sbjct: 1366 EEDEGSKFCEEDIDQILLRRTKTIT----IESEGCGSTFAKASFVASGNRTDISLDDPNF 1421
Query: 1120 IEQWAFEAKEEEKALHMGRGS 1140
++WA +A+ + A+ GR S
Sbjct: 1422 WQKWAKKAELDLDAIS-GRNS 1441
Score = 48 (22.0 bits), Expect = 4.3e-97, Sum P(2) = 4.3e-97
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 284 LKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQAR---IMRLNKA 340
LKE K+E+ ++++A R ++ + + + +EY NQ R + LN
Sbjct: 811 LKEDVDLAKIEEFEQLQASRPDTRQLDRPPSNIWKKIDQSREYKNGNQLREYQLEGLNWL 870
Query: 341 VMNYH 345
+ N++
Sbjct: 871 LFNWY 875
Score = 39 (18.8 bits), Expect = 3.8e-96, Sum P(2) = 3.8e-96
Identities = 8/25 (32%), Positives = 18/25 (72%)
Query: 279 TKRQGLKEARATEKLEKQQKVEAER 303
T++Q LK+ R +K+++ + +A+R
Sbjct: 731 TEQQLLKDKRIQQKIKRFKLRQAQR 755
>UNIPROTKB|Q9HCK8 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0070016 "armadillo repeat
domain binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IDA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0045945
"positive regulation of transcription from RNA polymerase III
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
[GO:0002039 "p53 binding" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
[GO:0042393 "histone binding" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 Pfam:PF00385
GO:GO:0005524 GO:GO:0045892 GO:GO:0043066 GO:GO:0003677
GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0035064
GO:GO:0008013 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0043044 GO:GO:0071339 GO:GO:0002039 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0008094 HOVERGEN:HBG107676 EMBL:CR749315
EMBL:AL834524 EMBL:AL135744 EMBL:AL161747 EMBL:CB043942
EMBL:AB046784 EMBL:AK131077 EMBL:BC011695 EMBL:BC025964
EMBL:BC036920 EMBL:BC063693 EMBL:BC073903 EMBL:BC098452
IPI:IPI00398992 IPI:IPI00719073 RefSeq:NP_001164100.1
RefSeq:NP_065971.2 UniGene:Hs.530698 PDB:2CKA PDB:2DL6 PDBsum:2CKA
PDBsum:2DL6 ProteinModelPortal:Q9HCK8 SMR:Q9HCK8 IntAct:Q9HCK8
STRING:Q9HCK8 PhosphoSite:Q9HCK8 DMDM:226706293 PaxDb:Q9HCK8
PRIDE:Q9HCK8 Ensembl:ENST00000399982 Ensembl:ENST00000430710
Ensembl:ENST00000557364 GeneID:57680 KEGG:hsa:57680 UCSC:uc001war.2
UCSC:uc001was.2 CTD:57680 GeneCards:GC14M021853 HGNC:HGNC:20153
HPA:HPA000849 MIM:610528 neXtProt:NX_Q9HCK8 PharmGKB:PA134957052
KO:K04494 OMA:FLAYMED EvolutionaryTrace:Q9HCK8 GenomeRNAi:57680
NextBio:64494 ArrayExpress:Q9HCK8 Bgee:Q9HCK8 CleanEx:HS_CHD8
Genevestigator:Q9HCK8 GermOnline:ENSG00000100888 Uniprot:Q9HCK8
Length = 2581
Score = 956 (341.6 bits), Expect = 5.4e-97, Sum P(3) = 5.4e-97
Identities = 233/631 (36%), Positives = 357/631 (56%)
Query: 556 KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVPL 615
+L+EYQ++G+ W++ + N N ILADEMGLGKTIQ+IA + + ++GPFL+I PL
Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPL 868
Query: 616 STLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA-QMK-----------ASKFNVLLTTY 663
ST++NW EF W +N + Y GS R+ +Q +M A KF+ L+TT+
Sbjct: 869 STITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTF 927
Query: 664 EYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPE 723
E ++ D L ++ W+ +IIDE HR+KN +CKL L + H++LLTGTPLQN + E
Sbjct: 928 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLE-HKVLLTGTPLQNTVEE 986
Query: 724 LWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 783
L++LL+FL PS F S S F + F +L EE + ++L +L+P +LRRL
Sbjct: 987 LFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAILKPMMLRRL 1033
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMNTI 842
K++VE L K E II+ +++ +QK YR + K L+ G+ L+NT+
Sbjct: 1034 KEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGA-----GHTNMPNLLNTM 1088
Query: 843 VQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLY-----RVSGKFELLDRILPKLKST 897
++LRK CNHP++ EEK + + D + R +GK L+D++LPKLK+
Sbjct: 1089 MELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAG 1148
Query: 898 GHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLS 957
GH+VL+F QM + ++ILEDY R + Y R+DG + R + +F+ PDS+ F+F+L
Sbjct: 1149 GHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 1208
Query: 958 TRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERIL 1017
TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+T NS E +
Sbjct: 1209 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 1268
Query: 1018 AAARYKLNMDEKVIQA-GMFDQKSTGSERH--QFLQTILHQDDE----EDEEENAVPDDE 1070
A KL +D+ V+Q+ D TG ++ + ++ +L + E+++E + +E
Sbjct: 1269 DKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDEGSKFCEE 1328
Query: 1071 TVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEE 1130
++Q+L R T I++E + K+ + D + + ++WA +A +
Sbjct: 1329 DIDQILLRRT----TTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKKADLD 1384
Query: 1131 EKALHMGRG-----SRQRKQVDYTDSLTEKE 1156
L+ R RKQ + +L + +
Sbjct: 1385 MDLLNSKNNLVIDTPRVRKQTRHFSTLKDDD 1415
Score = 45 (20.9 bits), Expect = 5.4e-97, Sum P(3) = 5.4e-97
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 69 LEEDPR-YQKLIEMKANRTEIKHAF 92
LE+D R +QKL K +++H F
Sbjct: 688 LEKDKRIHQKLKRFKTKMAQMRHFF 712
Score = 45 (20.9 bits), Expect = 1.1e-95, Sum P(2) = 1.1e-95
Identities = 24/103 (23%), Positives = 43/103 (41%)
Query: 207 ENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQR--QLRAEVIA-CARR 263
ENR L +++ E+ N + + R +A E +VLN +R E RR
Sbjct: 448 ENR-RLEHQKKQEKANRIVAEAIA---RARARGEQNIPRVLNEDELPSVRPEEEGEKKRR 503
Query: 264 DTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKR 306
+ + + K++K G + + KL V +++KR
Sbjct: 504 KKSAGERLKEEKPKKSKTSGASKTKGKSKLNTITPVVGKKRKR 546
Score = 41 (19.5 bits), Expect = 5.4e-97, Sum P(3) = 5.4e-97
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 280 KRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNN--QARIMRL 337
KR +A A +KLE + + + R+ E + +L F Y+R N A M L
Sbjct: 786 KRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLL-----FNWYNRQNCILADEMGL 840
Query: 338 NKAVMN 343
K + +
Sbjct: 841 GKTIQS 846
Score = 41 (19.5 bits), Expect = 2.9e-95, Sum P(2) = 2.9e-95
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 281 RQGLKEARATEKLEKQQKV-----EAERKKRQKHQEYITTVL 317
+ G++E R E +KQ+K EA + R + ++ I VL
Sbjct: 443 KTGMEENRRLEHQKKQEKANRIVAEAIARARARGEQNIPRVL 484
>RGD|620696 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10116 "Rattus norvegicus" [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0002039 "p53 binding"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=ISO;ISS]
[GO:0003678 "DNA helicase activity" evidence=ISO;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO;IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISO;ISS] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO;ISS]
[GO:0042393 "histone binding" evidence=ISO;ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO;ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO;ISS]
[GO:0043234 "protein complex" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0045945 "positive regulation of
transcription from RNA polymerase III promoter" evidence=ISO;ISS]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:620696 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
GO:GO:0002039 EMBL:CH474040 InterPro:IPR023780 PROSITE:PS00598
GO:GO:0008094 HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
EMBL:AF169825 IPI:IPI00201110 IPI:IPI00923717 RefSeq:NP_075222.2
UniGene:Rn.98337 STRING:Q9JIX5 PhosphoSite:Q9JIX5 PRIDE:Q9JIX5
Ensembl:ENSRNOT00000022593 GeneID:65027 KEGG:rno:65027
UCSC:RGD:620696 NextBio:613802 Genevestigator:Q9JIX5 Uniprot:Q9JIX5
Length = 2581
Score = 955 (341.2 bits), Expect = 5.4e-97, Sum P(3) = 5.4e-97
Identities = 233/631 (36%), Positives = 357/631 (56%)
Query: 556 KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVPL 615
+L+EYQ++G+ W++ + N N ILADEMGLGKTIQ+IA + + ++GPFL+I PL
Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPL 868
Query: 616 STLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA-QMK-----------ASKFNVLLTTY 663
ST++NW EF W +N + Y GS R+ +Q +M A KF+ L+TT+
Sbjct: 869 STITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTF 927
Query: 664 EYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPE 723
E ++ D L ++ W+ +IIDE HR+KN +CKL L + H++LLTGTPLQN + E
Sbjct: 928 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLE-HKVLLTGTPLQNTVEE 986
Query: 724 LWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 783
L++LL+FL PS F S S F + F +L EE + ++L +L+P +LRRL
Sbjct: 987 LFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAILKPMMLRRL 1033
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMNTI 842
K++VE L K E II+ +++ +QK YR + K L+ G+ L+NT+
Sbjct: 1034 KEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGA-----GHTNMPNLLNTM 1088
Query: 843 VQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLY-----RVSGKFELLDRILPKLKST 897
++LRK CNHP++ EEK + + D + R +GK L+D++LPKLK+
Sbjct: 1089 MELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAGKLVLIDKLLPKLKAG 1148
Query: 898 GHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLS 957
GH+VL+F QM + ++ILEDY R + Y R+DG + R + +F+ PDS+ F+F+L
Sbjct: 1149 GHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 1208
Query: 958 TRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERIL 1017
TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+T NS E +
Sbjct: 1209 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 1268
Query: 1018 AAARYKLNMDEKVIQA-GMFDQKSTGSERH--QFLQTILHQDDE----EDEEENAVPDDE 1070
A KL +D+ V+Q+ D TG ++ + ++ +L + E+++E + +E
Sbjct: 1269 DKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDEGSKFCEE 1328
Query: 1071 TVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEE 1130
++Q+L R T I++E + K+ + D + + ++WA +A +
Sbjct: 1329 DIDQILLRRT----TTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKKADLD 1384
Query: 1131 EKALHMGRG-----SRQRKQVDYTDSLTEKE 1156
L+ R RKQ + +L + +
Sbjct: 1385 MDLLNSKNNLVIDTPRVRKQTRHFSTLKDDD 1415
Score = 45 (20.9 bits), Expect = 5.4e-97, Sum P(3) = 5.4e-97
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 69 LEEDPR-YQKLIEMKANRTEIKHAF 92
LE+D R +QKL K +++H F
Sbjct: 688 LEKDKRIHQKLKRFKTKMAQMRHFF 712
Score = 42 (19.8 bits), Expect = 5.4e-97, Sum P(3) = 5.4e-97
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 280 KRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNN--QARIMRL 337
KR +A A +KLE + + + R+ E + +L F Y+R N A M L
Sbjct: 786 KRVNRPQANAWKKLELSHEYKNRNQLREYQLEGVNWLL-----FNWYNRQNCILADEMGL 840
Query: 338 NKAVMN 343
K + +
Sbjct: 841 GKTIQS 846
Score = 41 (19.5 bits), Expect = 3.7e-95, Sum P(2) = 3.7e-95
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 281 RQGLKEARATEKLEKQQKV-----EAERKKRQKHQEYITTVL 317
+ G++E R E +KQ+K EA + R + ++ I VL
Sbjct: 443 KTGMEENRRLEHQKKQEKANRIVAEAIARARARGEQNIPRVL 484
>MGI|MGI:1915022 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0002039 "p53 binding" evidence=IPI] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003678 "DNA helicase activity" evidence=ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0035064 "methylated histone residue binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP;IDA] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0045945 "positive regulation of transcription
from RNA polymerase III promoter" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0070016 "armadillo repeat domain binding" evidence=ISO]
[GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 MGI:MGI:1915022 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 GO:GO:0008094
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
OMA:FLAYMED EMBL:DQ190419 EMBL:AY863219 EMBL:AK129393 EMBL:AK160299
IPI:IPI00858099 IPI:IPI00923681 RefSeq:NP_963999.2
UniGene:Mm.289934 ProteinModelPortal:Q09XV5 SMR:Q09XV5
IntAct:Q09XV5 STRING:Q09XV5 PhosphoSite:Q09XV5 PaxDb:Q09XV5
PRIDE:Q09XV5 Ensembl:ENSMUST00000089752 GeneID:67772 KEGG:mmu:67772
UCSC:uc007tot.1 UCSC:uc007tov.1 InParanoid:Q09XV5 ChiTaRS:CHD8
NextBio:325525 Bgee:Q09XV5 Genevestigator:Q09XV5 Uniprot:Q09XV5
Length = 2582
Score = 955 (341.2 bits), Expect = 1.4e-96, Sum P(3) = 1.4e-96
Identities = 233/631 (36%), Positives = 357/631 (56%)
Query: 556 KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVPL 615
+L+EYQ++G+ W++ + N N ILADEMGLGKTIQ+IA + + ++GPFL+I PL
Sbjct: 812 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPL 870
Query: 616 STLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA-QMK-----------ASKFNVLLTTY 663
ST++NW EF W +N + Y GS R+ +Q +M A KF+ L+TT+
Sbjct: 871 STITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTF 929
Query: 664 EYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPE 723
E ++ D L ++ W+ +IIDE HR+KN +CKL L + H++LLTGTPLQN + E
Sbjct: 930 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLE-HKVLLTGTPLQNTVEE 988
Query: 724 LWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 783
L++LL+FL PS F S S F + F +L EE + ++L +L+P +LRRL
Sbjct: 989 LFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAILKPMMLRRL 1035
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMNTI 842
K++VE L K E II+ +++ +QK YR + K L+ G+ L+NT+
Sbjct: 1036 KEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGA-----GHTNMPNLLNTM 1090
Query: 843 VQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLY-----RVSGKFELLDRILPKLKST 897
++LRK CNHP++ EEK + + D + R +GK L+D++LPKLK+
Sbjct: 1091 MELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAGKLVLIDKLLPKLKAG 1150
Query: 898 GHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLS 957
GH+VL+F QM + ++ILEDY R + Y R+DG + R + +F+ PDS+ F+F+L
Sbjct: 1151 GHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 1210
Query: 958 TRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERIL 1017
TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+T NS E +
Sbjct: 1211 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 1270
Query: 1018 AAARYKLNMDEKVIQA-GMFDQKSTGSERH--QFLQTILHQDDE----EDEEENAVPDDE 1070
A KL +D+ V+Q+ D TG ++ + ++ +L + E+++E + +E
Sbjct: 1271 DKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDEGSKFCEE 1330
Query: 1071 TVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEE 1130
++Q+L R T I++E + K+ + D + + ++WA +A +
Sbjct: 1331 DIDQILLRRT----TTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKKADLD 1386
Query: 1131 EKALHMGRG-----SRQRKQVDYTDSLTEKE 1156
L+ R RKQ + +L + +
Sbjct: 1387 MDLLNSKNNLVIDTPRVRKQTRHFSTLKDDD 1417
Score = 45 (20.9 bits), Expect = 1.4e-96, Sum P(3) = 1.4e-96
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 69 LEEDPR-YQKLIEMKANRTEIKHAF 92
LE+D R +QKL K +++H F
Sbjct: 690 LEKDKRIHQKLKRFKTKMAQMRHFF 714
Score = 41 (19.5 bits), Expect = 3.7e-96, Sum P(3) = 3.7e-96
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 281 RQGLKEARATEKLEKQQKV-----EAERKKRQKHQEYITTVL 317
+ G++E R E +KQ+K EA + R + ++ I VL
Sbjct: 445 KTGMEENRRLEHQKKQEKANRIVAEAIARARARGEQNIPRVL 486
Score = 38 (18.4 bits), Expect = 1.4e-96, Sum P(3) = 1.4e-96
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 1296 QIYN-EELSLIHEDSVVLESVFTKARQRVESG 1326
Q+ N E L+L ED VV S T V G
Sbjct: 2017 QVPNLESLTLKLEDEVVARSRLTSQDYEVRVG 2048
>UNIPROTKB|F1MLB2 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:DAAA02028315 EMBL:DAAA02028312 EMBL:DAAA02028313
EMBL:DAAA02028314 IPI:IPI01017729 Ensembl:ENSBTAT00000027215
Uniprot:F1MLB2
Length = 2537
Score = 947 (338.4 bits), Expect = 4.4e-96, Sum P(3) = 4.4e-96
Identities = 233/632 (36%), Positives = 357/632 (56%)
Query: 556 KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVPL 615
+L+EYQ++G+ W++ + N N ILADEMGLGKTIQ+IA + + ++GPFL+I PL
Sbjct: 763 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPL 821
Query: 616 STLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA-QMK-----------ASKFNVLLTTY 663
ST++NW EF W +N + Y GS R+ +Q +M A KF+ L+TT+
Sbjct: 822 STITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTF 880
Query: 664 EYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPE 723
E ++ D L ++ W+ +IIDE HR+KN +CKL L + H++LLTGTPLQN + E
Sbjct: 881 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLE-HKVLLTGTPLQNTVEE 939
Query: 724 LWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 783
L++LL+FL PS F S S F + F +L EE + ++L +L+P +LRRL
Sbjct: 940 LFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAILKPMMLRRL 986
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMNTI 842
K++VE L K E II+ +++ +QK YR + K L+ G+ L+NT+
Sbjct: 987 KEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGA-----GHTNMPNLLNTM 1041
Query: 843 VQLRKLCNHPFMFQ-NIEEKFSDHVGGSGIVSGPDLY-----RVSGKFELLDRILPKLKS 896
++LRK CNHP++ EEK + + D + R +GK L+D++LPKLK+
Sbjct: 1042 MELRKCCNHPYLINAGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKA 1101
Query: 897 TGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVL 956
GH+VL+F QM + ++ILEDY R + Y R+DG + R + +F+ PDS+ F+F+L
Sbjct: 1102 GGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLL 1161
Query: 957 STRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERI 1016
TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+T NS E +
Sbjct: 1162 CTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREM 1221
Query: 1017 LAAARYKLNMDEKVIQA-GMFDQKSTGSERH--QFLQTILHQDDE----EDEEENAVPDD 1069
A KL +D+ V+Q+ D TG ++ + ++ +L + E+++E + +
Sbjct: 1222 FDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDEGSKFCE 1281
Query: 1070 ETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKE 1129
E ++Q+L R T I++E + K+ + D + + ++WA +A
Sbjct: 1282 EDIDQILLRRT----TTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKKADL 1337
Query: 1130 EEKALHMGRG-----SRQRKQVDYTDSLTEKE 1156
+ L+ R RKQ + +L + +
Sbjct: 1338 DMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDD 1369
Score = 45 (20.9 bits), Expect = 4.4e-96, Sum P(3) = 4.4e-96
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 69 LEEDPR-YQKLIEMKANRTEIKHAF 92
LE+D R +QKL K +++H F
Sbjct: 641 LEKDKRIHQKLKRFKTKMAQMRHFF 665
Score = 44 (20.5 bits), Expect = 1.2e-94, Sum P(2) = 1.2e-94
Identities = 24/103 (23%), Positives = 43/103 (41%)
Query: 207 ENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQR--QLRAEVIA-CARR 263
ENR L +++ E+ N + + R +A E +VLN +R E RR
Sbjct: 401 ENR-RLEHQKKQEKANRIVAEAIA---RARARGEQNIPRVLNEDELPSVRPEEEGEKKRR 456
Query: 264 DTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKR 306
+ + + K++K G + + KL V +++KR
Sbjct: 457 KKSSGERLKEEKPKKSKTSGTSKTKGKSKLNTITPVVGKKRKR 499
Score = 41 (19.5 bits), Expect = 4.4e-96, Sum P(3) = 4.4e-96
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 280 KRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNN--QARIMRL 337
KR +A A +KLE + + + R+ E + +L F Y+R N A M L
Sbjct: 739 KRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLL-----FNWYNRQNCILADEMGL 793
Query: 338 NKAVMN 343
K + +
Sbjct: 794 GKTIQS 799
Score = 41 (19.5 bits), Expect = 2.5e-94, Sum P(2) = 2.5e-94
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 281 RQGLKEARATEKLEKQQKV-----EAERKKRQKHQEYITTVL 317
+ G++E R E +KQ+K EA + R + ++ I VL
Sbjct: 396 KTGIEENRRLEHQKKQEKANRIVAEAIARARARGEQNIPRVL 437
>UNIPROTKB|F1S8J5 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:FP340603 Ensembl:ENSSSCT00000002379
ArrayExpress:F1S8J5 Uniprot:F1S8J5
Length = 2569
Score = 947 (338.4 bits), Expect = 4.7e-96, Sum P(3) = 4.7e-96
Identities = 233/632 (36%), Positives = 357/632 (56%)
Query: 556 KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVPL 615
+L+EYQ++G+ W++ + N N ILADEMGLGKTIQ+IA + + ++GPFL+I PL
Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPL 868
Query: 616 STLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA-QMK-----------ASKFNVLLTTY 663
ST++NW EF W +N + Y GS R+ +Q +M A KF+ L+TT+
Sbjct: 869 STITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTF 927
Query: 664 EYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPE 723
E ++ D L ++ W+ +IIDE HR+KN +CKL L + H++LLTGTPLQN + E
Sbjct: 928 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLE-HKVLLTGTPLQNTVEE 986
Query: 724 LWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 783
L++LL+FL PS F S S F + F +L EE + ++L +L+P +LRRL
Sbjct: 987 LFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAILKPMMLRRL 1033
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMNTI 842
K++VE L K E II+ +++ +QK YR + K L+ G+ L+NT+
Sbjct: 1034 KEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGA-----GHTNMPNLLNTM 1088
Query: 843 VQLRKLCNHPFMFQ-NIEEKFSDHVGGSGIVSGPDLY-----RVSGKFELLDRILPKLKS 896
++LRK CNHP++ EEK + + D + R +GK L+D++LPKLK+
Sbjct: 1089 MELRKCCNHPYLINAGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKA 1148
Query: 897 TGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVL 956
GH+VL+F QM + ++ILEDY R + Y R+DG + R + +F+ PDS+ F+F+L
Sbjct: 1149 GGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLL 1208
Query: 957 STRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERI 1016
TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+T NS E +
Sbjct: 1209 CTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREM 1268
Query: 1017 LAAARYKLNMDEKVIQA-GMFDQKSTGSERH--QFLQTILHQDDE----EDEEENAVPDD 1069
A KL +D+ V+Q+ D TG ++ + ++ +L + E+++E + +
Sbjct: 1269 FDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDEGSKFCE 1328
Query: 1070 ETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKE 1129
E ++Q+L R T I++E + K+ + D + + ++WA +A
Sbjct: 1329 EDIDQILLRRT----TTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKKADL 1384
Query: 1130 EEKALHMGRG-----SRQRKQVDYTDSLTEKE 1156
+ L+ R RKQ + +L + +
Sbjct: 1385 DMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDD 1416
Score = 45 (20.9 bits), Expect = 4.7e-96, Sum P(3) = 4.7e-96
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 69 LEEDPR-YQKLIEMKANRTEIKHAF 92
LE+D R +QKL K +++H F
Sbjct: 688 LEKDKRIHQKLKRFKTKMAQMRHFF 712
Score = 44 (20.5 bits), Expect = 1.2e-94, Sum P(2) = 1.2e-94
Identities = 24/103 (23%), Positives = 43/103 (41%)
Query: 207 ENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQR--QLRAEVIA-CARR 263
ENR L +++ E+ N + + R +A E +VLN +R E RR
Sbjct: 448 ENR-RLEHQKKQEKANRIVAEAIA---RARARGEQNIPRVLNEDELPSVRPEEEGEKKRR 503
Query: 264 DTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKR 306
+ + + K++K G + + KL V +++KR
Sbjct: 504 KKSSGERLKEEKPKKSKTSGTSKTKGKSKLNTITPVVGKKRKR 546
Score = 41 (19.5 bits), Expect = 4.7e-96, Sum P(3) = 4.7e-96
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 280 KRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNN--QARIMRL 337
KR +A A +KLE + + + R+ E + +L F Y+R N A M L
Sbjct: 786 KRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLL-----FNWYNRQNCILADEMGL 840
Query: 338 NKAVMN 343
K + +
Sbjct: 841 GKTIQS 846
Score = 41 (19.5 bits), Expect = 2.6e-94, Sum P(2) = 2.6e-94
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 281 RQGLKEARATEKLEKQQKV-----EAERKKRQKHQEYITTVL 317
+ G++E R E +KQ+K EA + R + ++ I VL
Sbjct: 443 KTGIEENRRLEHQKKQEKANRIVAEAIARARARGEQNIPRVL 484
>UNIPROTKB|E2QUS7 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:FLAYMED EMBL:AAEX03009852
Ensembl:ENSCAFT00000009065 Uniprot:E2QUS7
Length = 2586
Score = 947 (338.4 bits), Expect = 4.9e-96, Sum P(3) = 4.9e-96
Identities = 233/632 (36%), Positives = 357/632 (56%)
Query: 556 KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVPL 615
+L+EYQ++G+ W++ + N N ILADEMGLGKTIQ+IA + + ++GPFL+I PL
Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPL 868
Query: 616 STLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA-QMK-----------ASKFNVLLTTY 663
ST++NW EF W +N + Y GS R+ +Q +M A KF+ L+TT+
Sbjct: 869 STITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTF 927
Query: 664 EYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPE 723
E ++ D L ++ W+ +IIDE HR+KN +CKL L + H++LLTGTPLQN + E
Sbjct: 928 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLE-HKVLLTGTPLQNTVEE 986
Query: 724 LWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 783
L++LL+FL PS F S S F + F +L EE + ++L +L+P +LRRL
Sbjct: 987 LFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAILKPMMLRRL 1033
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMNTI 842
K++VE L K E II+ +++ +QK YR + K L+ G+ L+NT+
Sbjct: 1034 KEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGA-----GHTNMPNLLNTM 1088
Query: 843 VQLRKLCNHPFMFQ-NIEEKFSDHVGGSGIVSGPDLY-----RVSGKFELLDRILPKLKS 896
++LRK CNHP++ EEK + + D + R +GK L+D++LPKLK+
Sbjct: 1089 MELRKCCNHPYLINAGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKA 1148
Query: 897 TGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVL 956
GH+VL+F QM + ++ILEDY R + Y R+DG + R + +F+ PDS+ F+F+L
Sbjct: 1149 GGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLL 1208
Query: 957 STRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERI 1016
TRAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+T NS E +
Sbjct: 1209 CTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREM 1268
Query: 1017 LAAARYKLNMDEKVIQA-GMFDQKSTGSERH--QFLQTILHQDDE----EDEEENAVPDD 1069
A KL +D+ V+Q+ D TG ++ + ++ +L + E+++E + +
Sbjct: 1269 FDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDEGSKFCE 1328
Query: 1070 ETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKE 1129
E ++Q+L R T I++E + K+ + D + + ++WA +A
Sbjct: 1329 EDIDQILLRRT----TTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKKADL 1384
Query: 1130 EEKALHMGRG-----SRQRKQVDYTDSLTEKE 1156
+ L+ R RKQ + +L + +
Sbjct: 1385 DMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDD 1416
Score = 45 (20.9 bits), Expect = 4.9e-96, Sum P(3) = 4.9e-96
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 69 LEEDPR-YQKLIEMKANRTEIKHAF 92
LE+D R +QKL K +++H F
Sbjct: 688 LEKDKRIHQKLKRFKTKMAQMRHFF 712
Score = 44 (20.5 bits), Expect = 1.3e-94, Sum P(2) = 1.3e-94
Identities = 24/103 (23%), Positives = 43/103 (41%)
Query: 207 ENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQR--QLRAEVIA-CARR 263
ENR L +++ E+ N + + R +A E +VLN +R E RR
Sbjct: 448 ENR-RLEHQKKQEKANRIVAEAIA---RARARGEQNIPRVLNEDELPSVRPEEEGEKKRR 503
Query: 264 DTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKR 306
+ + + K++K G + + KL V +++KR
Sbjct: 504 KKSSGERLKEEKPKKSKTSGTSKTKGKSKLNTITPVVGKKRKR 546
Score = 41 (19.5 bits), Expect = 4.9e-96, Sum P(3) = 4.9e-96
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 280 KRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNN--QARIMRL 337
KR +A A +KLE + + + R+ E + +L F Y+R N A M L
Sbjct: 786 KRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLL-----FNWYNRQNCILADEMGL 840
Query: 338 NKAVMN 343
K + +
Sbjct: 841 GKTIQS 846
Score = 40 (19.1 bits), Expect = 3.4e-94, Sum P(2) = 3.4e-94
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 283 GLKEARATEKLEKQQKV-----EAERKKRQKHQEYITTVL 317
G++E R E +KQ+K EA + R + ++ I VL
Sbjct: 445 GMEENRRLEHQKKQEKANRIVAEAIARARARGEQNIPRVL 484
>ZFIN|ZDB-GENE-030131-497 [details] [associations]
symbol:chd9 "chromodomain helicase DNA binding
protein 9" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-030131-497
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
EMBL:CR318585 EMBL:CU464124 EMBL:FP015866 IPI:IPI00972236
Ensembl:ENSDART00000027807 Bgee:E7F7W5 Uniprot:E7F7W5
Length = 2948
Score = 945 (337.7 bits), Expect = 6.3e-96, Sum P(3) = 6.3e-96
Identities = 229/615 (37%), Positives = 349/615 (56%)
Query: 557 LKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVPLS 616
L++YQ++G+ W++ + N N ILADEMGLGKTIQ+I + + + + GPFLII PLS
Sbjct: 913 LRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLEEIY-RTGIKGPFLIIAPLS 971
Query: 617 TLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ--------AQMK----ASKFNVLLTTYE 664
T++NW EF W +NV+ Y GS R+ LQ +Q + A +F ++TT+E
Sbjct: 972 TIANWEREFRTWT-HLNVIVYHGSVVSRQMLQQYEMYCRDSQGRVIRGAYRFQAVITTFE 1030
Query: 665 YVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPEL 724
++ L + W+ +IIDE HR+KN +CKL + H++LLTGTPLQN + EL
Sbjct: 1031 MILGGCPELNAIDWRCVIIDEAHRLKNKNCKLLEGFKLMSLE-HKVLLTGTPLQNTVEEL 1089
Query: 725 WALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 784
++LL+FL P+ F S +TF Q F +L EE + ++L +L+P +LRRLK
Sbjct: 1090 FSLLHFLEPTRFPSENTFMQEFG----------DLKTEEQV---QKLQAILKPMMLRRLK 1136
Query: 785 KEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLMNTIV 843
++VE +L K E II+ +++ +QK YR + K L G+ L+NT++
Sbjct: 1137 EDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGA-----GQANVPNLLNTMM 1191
Query: 844 QLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLY-----RVSGKFELLDRILPKLKSTG 898
+LRK CNHP++ + EEK + + D + + +GK L+D++LPK+K+ G
Sbjct: 1192 ELRKCCNHPYLIKGAEEKIMEDFKEVYSPAAVDFHLQAMIQSAGKLVLIDKLLPKMKAGG 1251
Query: 899 HRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLST 958
H+VL+F QM + ++ILEDY R + Y R+DG + R + +F+ PDS+ F+F+L T
Sbjct: 1252 HKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCT 1311
Query: 959 RAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILA 1018
RAGGLG+NL ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+T NS E +
Sbjct: 1312 RAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFD 1371
Query: 1019 AARYKLNMDEKVIQA--GMFDQKSTGSERHQFL-----QTILHQD------DEEDEEENA 1065
A KL +D+ V+Q+ G + + G + Q L + +L + DEEDE
Sbjct: 1372 RASLKLGLDKAVLQSMSGRDNSLAGGGQMQQQLSKKEIEDLLRRGAYGAIMDEEDEGNKF 1431
Query: 1066 VPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAF 1125
+D ++Q+L R + I++E R K+ + D + + ++WA
Sbjct: 1432 CEED--IDQILQRRTKTIT----IESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAK 1485
Query: 1126 EAKEEEKALHMGRGS 1140
+A+ + ++ GR S
Sbjct: 1486 KAEIDMDTVN-GRNS 1499
Score = 47 (21.6 bits), Expect = 6.3e-96, Sum P(3) = 6.3e-96
Identities = 24/82 (29%), Positives = 34/82 (41%)
Query: 265 TTLETAVNVKAYK-RTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDF 323
T +E ++A K T R A +KLEK +K E R E + +L F
Sbjct: 872 TKIEEFKKLQAAKPHTNRMERPPASHWKKLEKSRKYCNENSLRDYQLEGVNWLL-----F 926
Query: 324 KEYHRNN--QARIMRLNKAVMN 343
Y+R N A M L K + +
Sbjct: 927 NWYNRRNCILADEMGLGKTIQS 948
Score = 44 (20.5 bits), Expect = 3.4e-94, Sum P(2) = 3.4e-94
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 278 RTKRQGLKEARATEKLEKQQKVEAERKKRQKHQ 310
R+ + G ++++ +K K+ ++ K +QK Q
Sbjct: 617 RSHKAGSSKSKSKDKSSKKARIVKSSKPKQKAQ 649
Score = 43 (20.2 bits), Expect = 6.3e-96, Sum P(3) = 6.3e-96
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 66 EQGLEEDPRYQKLIE-MKANRTEIKHAFTSAQ 96
EQ LE+D R Q+ I+ K + + H F +
Sbjct: 786 EQQLEKDKRIQQKIKRFKIKQAQKAHFFADIE 817
Score = 41 (19.5 bits), Expect = 7.1e-94, Sum P(2) = 7.1e-94
Identities = 15/75 (20%), Positives = 38/75 (50%)
Query: 263 RDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERK--KRQKHQEYITTVLQHC 320
+ ++ ++ + +Y KR L++ + ++ ++QQ++E+ K+QK I+ +
Sbjct: 535 KSSSSSSSSSSSSYMSEKR--LQKQKQQQQQQQQQQMESPLSDDKQQKANRIISEAIAKA 592
Query: 321 KDFKEYHRNNQARIM 335
++ E N R+M
Sbjct: 593 RERGE---KNIPRVM 604
>SGD|S000003118 [details] [associations]
symbol:INO80 "ATPase and nucleosome spacing factor"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0042766 "nucleosome mobilization" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IDA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IDA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IMP] [GO:0016584
"nucleosome positioning" evidence=IDA] [GO:0031011 "Ino80 complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 SGD:S000003118
GO:GO:0005524 EMBL:BK006941 GO:GO:0003677 GO:GO:0006281
GO:GO:0045944 GO:GO:0016887 GO:GO:0006366 GO:GO:0031011
GO:GO:0006348 GO:GO:0004386 GO:GO:0043486 GO:GO:0042766 EMBL:Z48618
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:X99960 GO:GO:0016584 GO:GO:0043618 KO:K11665
GeneTree:ENSGT00680000100052 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
EMBL:Z72672 PIR:S60416 RefSeq:NP_011365.1 ProteinModelPortal:P53115
SMR:P53115 DIP:DIP-1386N IntAct:P53115 MINT:MINT-388693
STRING:P53115 PaxDb:P53115 PeptideAtlas:P53115 EnsemblFungi:YGL150C
GeneID:852728 KEGG:sce:YGL150C CYGD:YGL150c OMA:DEFSDWF
NextBio:972117 Genevestigator:P53115 GermOnline:YGL150C
Uniprot:P53115
Length = 1489
Score = 636 (228.9 bits), Expect = 6.7e-96, Sum P(4) = 6.7e-96
Identities = 131/341 (38%), Positives = 208/341 (60%)
Query: 543 EIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEK 602
EI EQ IL LKEYQ+KGL W+ +L++ +NGILADEMGLGKT+Q+I+++ +L E
Sbjct: 693 EITIEQPKILAC-TLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAEN 751
Query: 603 KKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA-----QMKASK-- 655
+ GPFL++ P STL NW E ++ P ++ Y G+ + RK L+ ++ +K
Sbjct: 752 HNIWGPFLVVTPASTLHNWVNEISKFLPQFKILPYWGNANDRKVLRKFWDRKNLRYNKNA 811
Query: 656 -FNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTG 714
F+V++T+Y+ V+ D L K+ W+YMI+DE +K+ L +F+ +RLLLTG
Sbjct: 812 PFHVMVTSYQMVVTDANYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCR-NRLLLTG 870
Query: 715 TPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHK 773
TP+QN + ELWALL+F++PS+F S F +WF+ + E +LN+++ +RRLH
Sbjct: 871 TPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIESHAEANTKLNQQQ----LRRLHM 926
Query: 774 VLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK---------GILLTDG 824
+L+PF+LRR+KK V+S+L DK+E + CD++ Q LY+ + ++ D
Sbjct: 927 ILKPFMLRRVKKNVQSELGDKIEIDVLCDLTQRQAKLYQVLKSQISTNYDAIENAATNDS 986
Query: 825 SEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQ--NIEEKFS 863
+ L+N ++Q RK+CNHP +F+ +++ FS
Sbjct: 987 TSNSASNSGSDQNLINAVMQFRKVCNHPDLFERADVDSPFS 1027
Score = 410 (149.4 bits), Expect = 6.7e-96, Sum P(4) = 6.7e-96
Identities = 83/175 (47%), Positives = 120/175 (68%)
Query: 869 SGIVSGPDLYRV---SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKY 925
S +S P + R S K LD +L KLKS GHRVL++ QMT++M+++E+Y +YR + +
Sbjct: 1283 SSNISMPSMDRFITESAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNH 1342
Query: 926 MRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQD 985
+RLDG++K EDR DL+ + + E F+F+LSTRAGGLG+NL ADTVI +DSDWNP D
Sbjct: 1343 IRLDGSSKLEDRRDLVHDWQT-NPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTID 1401
Query: 986 LQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKS 1040
QA DRAHR+GQ +V V RL+ ++EER+ A+ K + ++V+ G +K+
Sbjct: 1402 SQAMDRAHRLGQTRQVTVYRLLVRGTIEERMRDRAKQKEQV-QQVVMEGKTQEKN 1455
Score = 48 (22.0 bits), Expect = 2.5e-33, Sum P(2) = 2.5e-33
Identities = 20/85 (23%), Positives = 34/85 (40%)
Query: 787 VESQLPDKVEYIIK-CDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQL 845
+ S P V +IK C+ + QK+ R ++TD + + +L
Sbjct: 328 INSDRPKIVRELIKMCNKNKHQKIKKRRF--TNCIVTDYNPIDSKLNIKITLKQYHVKRL 385
Query: 846 RKLCNHPFMFQNIEEKFSDHVGGSG 870
+KL N + EE ++VG G
Sbjct: 386 KKLINDAKREREREEALKNNVGLDG 410
Score = 45 (20.9 bits), Expect = 6.7e-96, Sum P(4) = 6.7e-96
Identities = 16/80 (20%), Positives = 41/80 (51%)
Query: 240 ELRALKVLNFQRQLRAEVIACARRDTTLETA--VNVKAYKRTKRQGLKEA----RATEKL 293
++++++ NF++ CAR ++ +K ++ R+G++E + E+
Sbjct: 494 QIQSIRSTNFRKTSSL----CAREAKKWQSKNFKQIKDFQTRARRGIREMSNFWKKNERE 549
Query: 294 EK--QQKVEAERKKRQKHQE 311
E+ ++K+E E ++ K +E
Sbjct: 550 ERDLKKKIEKEAMEQAKKEE 569
Score = 44 (20.5 bits), Expect = 6.7e-96, Sum P(4) = 6.7e-96
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 369 AEDEEGYRKLIDQKKDKRLAFLLSQTDEY 397
A+ EE ++ +++ K+L FLL+QT+ Y
Sbjct: 565 AKKEEEEKE--SKRQAKKLNFLLTQTELY 591
Score = 44 (20.5 bits), Expect = 7.9e-96, Sum P(3) = 7.9e-96
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 276 YKRTKRQ--GLKEARATEKLEKQQKVEAERK-KRQ-KHQEYITT 315
+K+ +R+ LK+ E +E+ +K E E++ KRQ K ++ T
Sbjct: 543 WKKNEREERDLKKKIEKEAMEQAKKEEEEKESKRQAKKLNFLLT 586
Score = 41 (19.5 bits), Expect = 2.2e-57, Sum P(4) = 2.2e-57
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 1115 KEDEEIEQWAFEAKEEEK 1132
K+ E+++Q E K +EK
Sbjct: 1437 KQKEQVQQVVMEGKTQEK 1454
>UNIPROTKB|E1BS48 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AADN02038292
EMBL:AADN02038293 EMBL:AADN02038294 EMBL:AADN02038295
EMBL:AADN02038296 EMBL:AADN02038297 EMBL:AADN02038298
IPI:IPI00579055 Ensembl:ENSGALT00000005902 Uniprot:E1BS48
Length = 2614
Score = 960 (343.0 bits), Expect = 7.0e-96, Sum P(2) = 7.0e-96
Identities = 234/616 (37%), Positives = 354/616 (57%)
Query: 554 NG-KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLII 612
NG +L+EYQ++GL W++ + N N ILADEMGLGKTIQ+I + Y + + GPFLII
Sbjct: 853 NGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEILLSGIRGPFLII 911
Query: 613 VPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA-QM--KAS---------KFNVLL 660
PLST++NW EF W +NVV Y GS R+ +Q +M + S +F ++
Sbjct: 912 APLSTITNWEREFRTWT-DLNVVVYHGSMISRQMIQQYEMYFRDSQGRIVRGTYRFQAII 970
Query: 661 TTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNK 720
TT+E ++ L + W+ +IIDE HR+KN +CKL L + H++LLTGTPLQN
Sbjct: 971 TTFEMILGGCPELNAIEWRCVIIDEAHRLKNRNCKLLEGLKLMNLE-HKVLLTGTPLQNT 1029
Query: 721 LPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLL 780
+ EL++LL+FL P F + STF Q F +L EE + ++L +L+P +L
Sbjct: 1030 VEELFSLLHFLEPLRFPAESTFMQEFG----------DLKTEEQV---QKLQAILKPMML 1076
Query: 781 RRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXXXXLM 839
RRLK++VE +L K E II+ +++ +QK YR + K L+ G+ L+
Sbjct: 1077 RRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGA-----GQANVPNLV 1131
Query: 840 NTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLY-----RVSGKFELLDRILPKL 894
NT+++LRK CNHP++ + EEK + + PD + + +GK L+D++LPK+
Sbjct: 1132 NTMMELRKCCNHPYLIKGAEEKILGEFKETYNPTAPDFHLQAMIQSAGKLVLIDKLLPKM 1191
Query: 895 KSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIF 954
K+ GH+VL+F QM + ++ILEDY ++ + Y R+DG + R + +F+ PDS+ F+F
Sbjct: 1192 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1251
Query: 955 VLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQ-AQDRAHRIGQKNEVRVLRLMTVNSVE 1013
+L TRAGGLG+NL ADT IIFDSDWNP DLQ AQ R HRIGQ V+V RL+T NS E
Sbjct: 1252 LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQKAQARCHRIGQNKAVKVYRLITRNSYE 1311
Query: 1014 ERILAAARYKLNMDEKVIQAGMFDQKSTGSERH---QFLQTILHQD------DEEDEEEN 1064
+ A KL +D+ V+Q+ + S G + + ++ +L + DEEDE
Sbjct: 1312 REMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSK 1371
Query: 1065 AVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWA 1124
+D ++Q+L R + I++E R K+ + D + + ++WA
Sbjct: 1372 FCEED--IDQILQRRTKTIT----IESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWA 1425
Query: 1125 FEAKEEEKALHMGRGS 1140
+A+ + A+ GR S
Sbjct: 1426 KKAEIDIDAIS-GRNS 1440
Score = 43 (20.2 bits), Expect = 7.0e-96, Sum P(2) = 7.0e-96
Identities = 15/65 (23%), Positives = 30/65 (46%)
Query: 284 LKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQAR---IMRLNKA 340
LKE K+E+ ++++A R ++ + + +EY NQ R + LN
Sbjct: 809 LKEDVDQAKIEEFEQLQASRPDSRRLDRPPPNSWKKIEHSREYKNGNQLREYQLEGLNWL 868
Query: 341 VMNYH 345
+ N++
Sbjct: 869 LFNWY 873
Score = 42 (19.8 bits), Expect = 9.0e-96, Sum P(2) = 9.0e-96
Identities = 25/96 (26%), Positives = 47/96 (48%)
Query: 217 RIEELNGSLTSTLPEHLRVKAEIELRAL---KVLNFQRQLRAEVIACARRDTTLETAVNV 273
+I++ + L + P L V+ E A K+L+ R ++ E+ A +T E V
Sbjct: 660 KIKKNSAPLPAEQPLQLFVENPSEEDAAIVDKILS-SRIIKKEISAGMTVETE-EFFVKY 717
Query: 274 KAYK------RTKRQGLKEARATEKLEKQQKVEAER 303
K Y T++Q LK+ R +K+++ + +A+R
Sbjct: 718 KNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQR 753
>UNIPROTKB|F1MFS2 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006974
GO:GO:0006338 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 GO:GO:0008026 IPI:IPI00710168
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:DAAA02007335
Ensembl:ENSBTAT00000027762 Uniprot:F1MFS2
Length = 896
Score = 561 (202.5 bits), Expect = 1.4e-94, Sum P(2) = 1.4e-94
Identities = 135/319 (42%), Positives = 179/319 (56%)
Query: 557 LKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVPLS 616
L+ YQ++G+ W+ F+ IL DEMGLGKT QTIAL YL + GPFLI+ PLS
Sbjct: 48 LRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLS 107
Query: 617 TLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKA-SKFNVLLTTYEYVIKDKGPLAK 675
LSNW E ER+AP ++ V Y G R LQ +K S+F+VLLTTYE +KD L
Sbjct: 108 VLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDLKQESRFHVLLTTYEICLKDASFLKS 167
Query: 676 LHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLNFLLPSI 735
W +++DE HR+KN L L+ F V LLLTGTP+QN L EL++LL+F+ P +
Sbjct: 168 FPWSVLVVDEAHRLKNQSSLLHKTLSEFSVV-FSLLLTGTPIQNSLQELYSLLSFVEPDL 226
Query: 736 FKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKV 795
F EQ + F + +E E L+K+L+PFLLRR+K EV ++LP K
Sbjct: 227 FSK----EQVED--FVQRYQDIEKESESA----SELYKLLQPFLLRRVKAEVATELPRKT 276
Query: 796 EYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMF 855
E +I MS LQK Y K IL+ D + L N + QLRK +HP++F
Sbjct: 277 EVVIYHGMSALQKKYY-----KAILMKD-LDAFENEMAKKVKLQNVLSQLRKCVDHPYLF 330
Query: 856 QNIE-EKFS--DH-VGGSG 870
+E E F DH + SG
Sbjct: 331 DGVEPEPFEIGDHLIEASG 349
Score = 459 (166.6 bits), Expect = 1.4e-94, Sum P(2) = 1.4e-94
Identities = 126/341 (36%), Positives = 171/341 (50%)
Query: 817 KGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIE-EKFSDHVGGSGIVSGP 875
K IL+ D + L N + QLRK +HP++F +E E F G
Sbjct: 293 KAILMKD-LDAFENEMAKKVKLQNVLSQLRKCVDHPYLFDGVEPEPFE---------IGD 342
Query: 876 DLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAE 935
L SGK LLD++L L S GHRVLLF QMTQ+++IL+DY YRG+ Y R+DG+ + E
Sbjct: 343 HLIEASGKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGE 402
Query: 936 DRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRI 995
+R +K F F F LSTRAGG+G+NL ADTVI FDSD+NP DLQA RAHRI
Sbjct: 403 ERHLAIKNFG--QQPIFTF-LSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRI 459
Query: 996 GQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFD---QKSTGSERHQFLQTI 1052
GQ V+V+RL+ ++VEE + A KL + +I+ G F QK Q + +
Sbjct: 460 GQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNTIIEGGHFTLGAQKPAADADLQLSEIL 519
Query: 1053 LHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRI----DAERRKEQGKKSR-LIEVS 1107
D+ E + + + +L +E+ + + R E+GK L E
Sbjct: 520 KFGLDKLLSSEGSTMHEIDLKSILGETEDGHWVSDALPTAEEGSREPEEGKNHMYLFEGK 579
Query: 1108 ELPDWLIKEDEE-IEQWAFEAKEE-EKALHMGRGSRQRKQV 1146
+ KED E EQ K EK GR R + V
Sbjct: 580 DYSKEPSKEDRESFEQLVNLQKTLLEKTSQEGRLLRNKGSV 620
Score = 47 (21.6 bits), Expect = 3.8e-51, Sum P(2) = 3.8e-51
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 1264 MDIKKILGRIEDGKYSS 1280
+D+K ILG EDG + S
Sbjct: 537 IDLKSILGETEDGHWVS 553
>POMBASE|SPAC29B12.01 [details] [associations]
symbol:ino80 "SNF2 family helicase Ino80" species:4896
"Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 PomBase:SPAC29B12.01 GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006351 GO:GO:0016568 GO:GO:0031011 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 KO:K11665 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
RefSeq:NP_001018299.1 ProteinModelPortal:O14148 STRING:O14148
EnsemblFungi:SPAC29B12.01.1 GeneID:3361566 KEGG:spo:SPAC29B12.01
OMA:INDHNSA NextBio:20811604 Uniprot:O14148
Length = 1604
Score = 627 (225.8 bits), Expect = 2.4e-94, Sum P(4) = 2.4e-94
Identities = 128/325 (39%), Positives = 200/325 (61%)
Query: 541 VHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLM 600
V+ +Q +L+ KLKEYQ+KGL W+ +L+ +NGILADEMGLGKT+Q+I+++ YL
Sbjct: 827 VNAFEVKQPKMLMC-KLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVMAYLA 885
Query: 601 EKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA-----QM---K 652
E + GPFL+I P STL NW E R+ P + + Y GS RK L+ M +
Sbjct: 886 ETHNIWGPFLVIAPASTLHNWQQEITRFVPKLKCIPYWGSTKDRKILRKFWCRKNMTYDE 945
Query: 653 ASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLL 712
S F+V++T+Y+ V+ D + W+YMI+DE +K+ L F +RLLL
Sbjct: 946 NSPFHVVVTSYQLVVLDAQYFQSVKWQYMILDEAQAIKSSSSSRWKSLLAFKCR-NRLLL 1004
Query: 713 TGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEK-VELNEEETILIIRRL 771
TGTP+QN + ELWALL+F++PS+F S + F +WF+ + + +LNE++ ++RL
Sbjct: 1005 TGTPIQNTMQELWALLHFIMPSLFDSHNEFSEWFSKDIESHAQSNTQLNEQQ----LKRL 1060
Query: 772 HKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXX 831
H +L+PF+LRR+KK V+S+L +K+E + CD++ QK+LY+ + + + +
Sbjct: 1061 HMILKPFMLRRVKKNVQSELGEKIEKEVYCDLTQRQKILYQALRRQISIAELLEKAILGG 1120
Query: 832 XXXXXXLMNTIVQLRKLCNHPFMFQ 856
+MN ++Q RK+CNHP +F+
Sbjct: 1121 DDTVASIMNLVMQFRKVCNHPDLFE 1145
Score = 405 (147.6 bits), Expect = 2.4e-94, Sum P(4) = 2.4e-94
Identities = 76/154 (49%), Positives = 112/154 (72%)
Query: 881 SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL 940
SGK LD++L +LK+ HRVL++ QMT++++++E+Y ++R +KY+RLDG++K R D+
Sbjct: 1428 SGKLSKLDKLLVELKANDHRVLIYFQMTRMIDLMEEYLTFRQYKYLRLDGSSKISQRRDM 1487
Query: 941 LKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 1000
+ ++ E F+F+LSTRAGGLG+NL ADTVI +DSDWNP D QA DRAHRIGQ+ +
Sbjct: 1488 VTEWQTRP-ELFVFLLSTRAGGLGINLTAADTVIFYDSDWNPSIDSQAMDRAHRIGQQKQ 1546
Query: 1001 VRVLRLMTVNSVEERILAAARYKLNMDEKVIQAG 1034
V V R +T ++EERI+ A+ K + + VI G
Sbjct: 1547 VTVYRFITRGTIEERIVIRAKEKEEVQKVVISGG 1580
Score = 49 (22.3 bits), Expect = 2.4e-94, Sum P(4) = 2.4e-94
Identities = 23/102 (22%), Positives = 45/102 (44%)
Query: 231 EHLRVKAEIELRALK--VLNFQRQLRAEVIA-CARRDTTLETAVNVKAYKRTKRQGLKEA 287
+HLR K + + A K +L+ + + ++ R L + + RQ ++E
Sbjct: 334 QHLRNKRDEAVHAEKRRLLDIRGSIHDRLVCRYENRYNKLHASEYNHHHDWAVRQAIREE 393
Query: 288 RATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRN 329
A + K + A+ +K++K +E +LQ D K+ N
Sbjct: 394 VAAVEAAK---IRADEEKKKKEREEQVRLLQESAD-KDAEMN 431
Score = 44 (20.5 bits), Expect = 1.1e-56, Sum P(4) = 1.1e-56
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 1117 DEEIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEK-EWL 1158
+E I A E +E +K + G +R KQ+D + E WL
Sbjct: 1559 EERIVIRAKEKEEVQKVVISGGETRPTKQMDLKGNSREMVSWL 1601
Score = 43 (20.2 bits), Expect = 2.4e-94, Sum P(4) = 2.4e-94
Identities = 10/29 (34%), Positives = 20/29 (68%)
Query: 369 AEDEEGYRKLIDQKKDKRLAFLLSQTDEY 397
A+ EE R+ +++ ++L FL++QT+ Y
Sbjct: 715 AKKEEELRE--SRRQARKLDFLITQTELY 741
Score = 42 (19.8 bits), Expect = 7.6e-94, Sum P(3) = 7.6e-94
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 56 ALQRAID-SMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQQ 99
A + A+D + KE+ L E R + ++ +TE+ F ++ +
Sbjct: 707 AEREALDRAKKEEELRESRRQARKLDFLITQTELYSHFVGRKMDR 751
Score = 42 (19.8 bits), Expect = 1.3e-93, Sum P(4) = 1.3e-93
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 271 VNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKK--RQKHQE 311
+ KA KR R+ + + E++E+ + +AER+ R K +E
Sbjct: 678 MQTKA-KRAMRETMVFWKRNERVERDLRKKAEREALDRAKKEE 719
Score = 37 (18.1 bits), Expect = 3.8e-31, Sum P(4) = 3.8e-31
Identities = 16/48 (33%), Positives = 20/48 (41%)
Query: 632 VNVVAYKGSPHLRKTLQAQM---KASKFNVLLTTYEYVIKDKGPLAKL 676
+N A P RK L K S NV + + I D G L+KL
Sbjct: 1387 INNQAVSKLPIPRKPLLPSFGIAKGSYSNVRIPSMLRFIADSGKLSKL 1434
>SGD|S000001934 [details] [associations]
symbol:IRC5 "Putative ATPase containing the DEAD/H
helicase-related sequence motif" species:4932 "Saccharomyces
cerevisiae" [GO:0006312 "mitotic recombination" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SGD:S000001934 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 EMBL:D50617 EMBL:BK006940 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006312 GeneTree:ENSGT00550000075106 PIR:S56293
RefSeq:NP_116696.2 ProteinModelPortal:P43610 SMR:P43610
DIP:DIP-5300N MINT:MINT-543614 STRING:P43610 PaxDb:P43610
PRIDE:P43610 EnsemblFungi:YFR038W GeneID:850599 KEGG:sce:YFR038W
CYGD:YFR038w OMA:FEIFNKW OrthoDB:EOG40S3Q6 NextBio:966463
Genevestigator:P43610 GermOnline:YFR038W Uniprot:P43610
Length = 853
Score = 588 (212.0 bits), Expect = 4.7e-94, Sum P(3) = 4.7e-94
Identities = 122/279 (43%), Positives = 177/279 (63%)
Query: 547 EQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVN 606
+Q +L N LK YQ++GL W+++L+ N LNGILADEMGLGKT+Q+IAL+ ++ E
Sbjct: 212 KQPRLLKNCILKPYQLEGLNWLITLYENGLNGILADEMGLGKTVQSIALLAFIYEMD-TK 270
Query: 607 GPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKA-----SKFNVLLT 661
GPFL+ PLSTL NW EF ++AP + V+ Y G+ ++ A++K +++T
Sbjct: 271 GPFLVTAPLSTLDNWMNEFAKFAPDLPVLKYYGTNGYKER-SAKLKNFFKQHGGTGIVIT 329
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
+YE +++D + +WK++I+DEGHR+KN +C+L L + +RLLLTGTPLQN L
Sbjct: 330 SYEIILRDTDLIMSQNWKFLIVDEGHRLKNINCRLIKELKKINTS-NRLLLTGTPLQNNL 388
Query: 722 PELWALLNFLLPSIFKSVSTFEQWF-----NAPFATTGEKVE--LNEEETILIIRRLHKV 774
ELW+LLNF++P IF F +WF N + E + +N+E +I LH +
Sbjct: 389 AELWSLLNFIMPDIFADFEIFNKWFDFDSLNLGSGSNSEALNKLINDELQKNLISNLHTI 448
Query: 775 LRPFLLRRLKKEVESQ-LPDKVEYIIKCDMSGLQKVLYR 812
L+PFLLRRLKK V + LP K EYII C M+ Q+ Y+
Sbjct: 449 LKPFLLRRLKKVVLANILPPKREYIINCPMTSAQEKFYK 487
Score = 407 (148.3 bits), Expect = 4.7e-94, Sum P(3) = 4.7e-94
Identities = 86/214 (40%), Positives = 129/214 (60%)
Query: 838 LMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKST 897
L N ++QLR++ + F+F + ++ + L + SGK ++L +++P L S
Sbjct: 566 LQNMMMQLRQIIDSTFLF------YFPYLHPEDLTL-ETLLKTSGKLQILQKLIPPLISE 618
Query: 898 GHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLS 957
GH+VL++ Q +++++ED+ F R+DG+ E R D L+KFN+ ++ IF+LS
Sbjct: 619 GHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLS 678
Query: 958 TRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERIL 1017
TRA GLG+NL ADTV++FDSDWNP DLQA DR HRIGQ++ V V RL N++E IL
Sbjct: 679 TRAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNTIEHVIL 738
Query: 1018 AAARYKLNMDEKVIQAGMFDQ-KSTGSERHQFLQ 1050
A K N++ VIQ G F+ K FL+
Sbjct: 739 TRAANKRNLERMVIQMGKFNNLKKLALNEGSFLK 772
Score = 51 (23.0 bits), Expect = 4.7e-94, Sum P(3) = 4.7e-94
Identities = 25/93 (26%), Positives = 42/93 (45%)
Query: 224 SLTSTLPEHLRVKAEIELRALKVLNFQRQLRAEVIACARRDTTLETAVNV-KAYKRTKRQ 282
SL L E + K + L+ K+ F RQ ++V + DT L + V A +
Sbjct: 113 SLDDELSE-MDTKT-VSLKLKKLNEFVRQ--SQVYSSIIADTLLHRSNEVANANTKDNSN 168
Query: 283 GLKEARATEKLEKQQKVEAERKKRQKHQEYITT 315
E +++K + ++K + K+QK E TT
Sbjct: 169 SDDEEHSSKKRKTKKKSITDFFKKQKKNEDTTT 201
Score = 40 (19.1 bits), Expect = 6.8e-93, Sum P(3) = 6.8e-93
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 286 EARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQ 331
+A+ +KL K K E + + + TV K E+ R +Q
Sbjct: 96 QAQVVDKLAKDTKSEQKSLDDELSEMDTKTVSLKLKKLNEFVRQSQ 141
>ASPGD|ASPL0000041040 [details] [associations]
symbol:AN9077 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0000812 "Swr1
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001306 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 EMBL:AACD01000169 KO:K11681
RefSeq:XP_682346.1 STRING:Q5ARK3 GeneID:2868023 KEGG:ani:AN9077.2
HOGENOM:HOG000186095 OMA:YGNQEER OrthoDB:EOG49S9FK Uniprot:Q5ARK3
Length = 1698
Score = 628 (226.1 bits), Expect = 1.1e-93, Sum P(3) = 1.1e-93
Identities = 129/315 (40%), Positives = 191/315 (60%)
Query: 552 LVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLI 611
L+ G L+EYQ GL+W+ L++N++NGILADEMGLGKTIQTIAL+ +L + V GP L+
Sbjct: 820 LLRGTLREYQHFGLDWLAGLYSNHINGILADEMGLGKTIQTIALLAHLAVEHGVWGPHLV 879
Query: 612 IVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ-AQMKASKFNVLLTTYEYVIKDK 670
+VP S + NW +EF++W P ++ Y G+ R+ + M + +NVL+T+Y+ V++D+
Sbjct: 880 VVPTSVILNWEMEFKKWCPGFKIMTYYGNQEERRQKRRGWMDDNSWNVLITSYQLVLQDQ 939
Query: 671 GPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLNF 730
L + W YMI+DE H +KN + L TF RLLLTGTPLQN L ELW+LL F
Sbjct: 940 QVLKRRSWHYMILDEAHNIKNFRSQRWQALLTFRTRA-RLLLTGTPLQNNLTELWSLLFF 998
Query: 731 LLPSI--------FKSVSTFEQWFNAPFATTGEKV-ELNEEETILIIRRLHKVLRPFLLR 781
L+P+ F + F +WF P E E ++E ++ +LH VLRP++LR
Sbjct: 999 LMPTDGDEAGIEGFADLRNFSEWFRRPVEQILEHGRETMDDEAKQVVTKLHTVLRPYILR 1058
Query: 782 RLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNT 841
RLK +VE Q+P K E+++ C +S Q+ LY G + + ++N
Sbjct: 1059 RLKADVEKQMPGKYEHVVYCRLSKRQRYLY-----DGFM-SRAQTKETLASGNYLSIINC 1112
Query: 842 IVQLRKLCNHPFMFQ 856
++QLRK+CNHP +F+
Sbjct: 1113 LMQLRKVCNHPDLFE 1127
Score = 403 (146.9 bits), Expect = 1.1e-93, Sum P(3) = 1.1e-93
Identities = 86/218 (39%), Positives = 131/218 (60%)
Query: 882 GKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLL 941
GK + LD++L LK+ GHR L+F QMT+++++LE + + G +Y+RLDGTTK E R L
Sbjct: 1373 GKLQRLDKLLRDLKAGGHRALIFTQMTKMLDVLEQFLNIHGHRYLRLDGTTKVEQRQILT 1432
Query: 942 KKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 1001
+FN D+ F+LS+R+GGLG+NL ADTVI +D DWNP D Q QDR HRIGQ +V
Sbjct: 1433 DRFNN-DNRILAFILSSRSGGLGINLTGADTVIFYDLDWNPAMDKQCQDRCHRIGQTRDV 1491
Query: 1002 RVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDE 1061
+ R ++ ++E IL A K +D+ VIQ G F +T ++ ++ D+ +
Sbjct: 1492 HIYRFVSEYTIESNILRKANQKRMLDDVVIQEGEF---TTDYFTKLDVRDMIGNDEALKD 1548
Query: 1062 EENAVPDDETVNQMLARSE--EEFQTYQRIDAERRKEQ 1097
E +A D N++ S E+ + + IDA + ++
Sbjct: 1549 EASAAMDRVLENRVTNTSRVFEQAEDKEDIDAAKNAQK 1586
Score = 43 (20.2 bits), Expect = 1.1e-93, Sum P(3) = 1.1e-93
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 278 RTKRQGLKE-ARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMR 336
R RQ K A A ++ +++ + E R++ +E Q KD K+ +A I R
Sbjct: 361 RAHRQAAKSLAAACAEVWRKRNKDPEDILREQQEEMRGKRKQLAKDLKKMFELARAEIDR 420
Query: 337 LNKA 340
+ A
Sbjct: 421 VRLA 424
Score = 40 (19.1 bits), Expect = 1.2e-55, Sum P(3) = 1.2e-55
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 1267 KKILGRIEDGKYSSVDELQKDFKTLCRNAQIYNEELSLI 1305
K++L + + GK +D+L +D K A I+ + ++
Sbjct: 1365 KRLL-QYDCGKLQRLDKLLRDLKAGGHRALIFTQMTKML 1402
>DICTYBASE|DDB_G0284171 [details] [associations]
symbol:DDB_G0284171 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 dictyBase:DDB_G0284171
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006357 EMBL:AAFI02000063 GO:GO:0004003 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907
KO:K11367 RefSeq:XP_638708.1 ProteinModelPortal:Q54Q16
STRING:Q54Q16 EnsemblProtists:DDB0220640 GeneID:8624452
KEGG:ddi:DDB_G0284171 InParanoid:Q54Q16 OMA:DINATEF
ProtClustDB:CLSZ2732060 Uniprot:Q54Q16
Length = 1917
Score = 890 (318.4 bits), Expect = 1.7e-92, Sum P(4) = 1.7e-92
Identities = 220/556 (39%), Positives = 324/556 (58%)
Query: 548 QASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNG 607
Q S + G L++YQ++GL W+V + NN N ILADEMGLGKTIQTI+ ++YL ++ + G
Sbjct: 746 QPSWISAGTLRDYQMEGLNWLVHSWMNNTNVILADEMGLGKTIQTISFLSYLFNEQDIKG 805
Query: 608 PFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVI 667
PFL++VPLST+ NW EF +WAP++NV+ Y G+ R ++ YE+
Sbjct: 806 PFLVVVPLSTIENWQREFAKWAPAMNVIVYTGTGQSRD-------------IIRLYEFYT 852
Query: 668 KDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAP--HRLLLTGTPLQNKLPELW 725
++ KL++ ++ +K+ + L I F HRL + + L L +L+
Sbjct: 853 TNRLGKKKLNFNVLLTTYDFILKDKNT-LGTIKWEFLAVDEAHRLKNSESVLHEVL-KLY 910
Query: 726 ALLNFLLPSIFKSVSTFEQ-W----FNAPFATTGEKVELNEEETILI----IRRLHKVLR 776
N LL + ++ ++ W F P T K + ++ + L I +LH VL+
Sbjct: 911 NTTNRLLVTGTPLQNSLKELWNLLNFLMPNKFTSLK-DFQDQYSDLKENDQIAQLHSVLK 969
Query: 777 PFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGIL-LTDGSEXXXXXXXXX 835
P LLRR+KK+VE LP K E I++ D+S +QK Y+ + TK L G
Sbjct: 970 PHLLRRIKKDVEKSLPPKTERILRVDLSNVQKKYYKWILTKNFQELNKGK-------GEK 1022
Query: 836 XXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLK 895
L+N + +L+K CNHP+++QN ++ +G ++ + R SGK LLD++L +LK
Sbjct: 1023 TTLLNIMTELKKTCNHPYLYQNARDECE--LGAKDLLDS--MIRASGKLVLLDKLLIRLK 1078
Query: 896 STGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
TGHRVL+F QM ++++IL DY R F++ RLDG+ E R + +FNA DS F F+
Sbjct: 1079 ETGHRVLIFSQMVRMLDILADYLKGRSFQFQRLDGSMSREKRSQAMDRFNAVDSPDFCFL 1138
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
LST+AGGLG+NL TADTVIIFDSDWNP DLQA+ RAHRIGQKN V + RL++ +SVEE
Sbjct: 1139 LSTKAGGLGINLSTADTVIIFDSDWNPQNDLQAEARAHRIGQKNHVNIYRLVSKSSVEED 1198
Query: 1016 ILAAARYKLNMDEKVIQAGMFDQ--KS-TGSERHQF----LQTILHQDDEE---DEEENA 1065
IL A+ K+ +D VIQ Q KS T + + F L+ IL EE + E A
Sbjct: 1199 ILERAKQKMVLDHLVIQTMEKSQTAKSNTPNNSNVFNKEELEAILKFGAEELFKETGEEA 1258
Query: 1066 VPDDET-VNQMLARSE 1080
P +E ++++L+R+E
Sbjct: 1259 NPIEEMDIDEILSRAE 1274
Score = 44 (20.5 bits), Expect = 1.7e-92, Sum P(4) = 1.7e-92
Identities = 11/47 (23%), Positives = 22/47 (46%)
Query: 262 RRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQK 308
R+ T T ++ ++ KR E+ + E E E +KK+++
Sbjct: 335 RKQTASTTTTTTRSGRQAKRITYSESDSEES-ESDSDYEPNKKKKKQ 380
Score = 42 (19.8 bits), Expect = 1.7e-92, Sum P(4) = 1.7e-92
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 1056 DDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAER-RKE--QGKKSRLIEVSELPD 1111
DD++++++N +D + + +T +RI +E +KE KK+ +S P+
Sbjct: 1639 DDDDNDKDNDNDEDYMEEEEKKEKTKNTRTKKRIKSEELQKEILSPKKTSFGRLSVPPN 1697
Score = 38 (18.4 bits), Expect = 1.7e-92, Sum P(4) = 1.7e-92
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 436 GKVTLDQDETSQLTDMHISVREISSGKVLKGED 468
GK +D +E S +D V + S ED
Sbjct: 406 GKAAIDSEEESNGSDGDQFVNNVFSSSSSSDED 438
>FB|FBgn0086902 [details] [associations]
symbol:kis "kismet" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0007350 "blastoderm segmentation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0019730 "antimicrobial humoral
response" evidence=IMP] [GO:0007298 "border follicle cell
migration" evidence=IMP] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0016322 "neuron remodeling" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0007614 "short-term memory"
evidence=IMP] [GO:0046622 "positive regulation of organ growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0007476 "imaginal disc-derived
wing morphogenesis" evidence=IMP] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0007411 GO:GO:0045892 GO:GO:0005875
EMBL:AE014134 GO:GO:0003677 GO:GO:0006200 GO:GO:0016322
GO:GO:0007031 GO:GO:0016887 GO:GO:0007298 GO:GO:0007614
GO:GO:0004386 GO:GO:0007379 GO:GO:0046622 GO:GO:0007476
GO:GO:0019730 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0007350 InterPro:IPR023780
KO:K14437 GeneTree:ENSGT00560000077077 RefSeq:NP_001137761.1
UniGene:Dm.3182 ProteinModelPortal:B7Z002 SMR:B7Z002 STRING:B7Z002
EnsemblMetazoa:FBtr0299837 GeneID:33185 KEGG:dme:Dmel_CG3696
CTD:33185 FlyBase:FBgn0086902 OMA:TTFEMIV OrthoDB:EOG4BZKHC
PhylomeDB:B7Z002 GenomeRNAi:33185 NextBio:782323 Bgee:B7Z002
Uniprot:B7Z002
Length = 5517
Score = 928 (331.7 bits), Expect = 2.1e-92, Sum P(3) = 2.1e-92
Identities = 217/552 (39%), Positives = 311/552 (56%)
Query: 547 EQASILVNGK-LKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKV 605
E+ + G L+ YQ++GL W+ + N N ILADEMGLGKTIQ++ + + E +
Sbjct: 2018 EKTPVYKGGNSLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFVHSVYEYG-I 2076
Query: 606 NGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQ-----------MKAS 654
GPFL+I PLST+ NW EFE W +NVV Y GS ++ +Q +K
Sbjct: 2077 RGPFLVIAPLSTIPNWQREFEGWT-DMNVVVYHGSVTSKQMIQDYEYYYKTESGKVLKEP 2135
Query: 655 -KFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLT 713
KFNVL+TT+E ++ D L +W+ +IDE HR+KN +CKL L + HR+LL+
Sbjct: 2136 IKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLE-HRVLLS 2194
Query: 714 GTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHK 773
GTPLQN + EL++LLNFL PS F S F F + L EE + +L
Sbjct: 2195 GTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGS----------LRTEEEV---NKLQA 2241
Query: 774 VLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXX 833
+L+P +LRRLK +VE L K E II+ +++ +QK YR GIL + S
Sbjct: 2242 LLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYR-----GILEQNFSFLKKGTTS 2296
Query: 834 XXX-XLMNTIVQLRKLCNHPFMFQNIEEK----FSDHVGGSGIVSGPDLYRVSGKFELLD 888
LMNT+++LRK C HP++ EE+ F G +L +GK L+D
Sbjct: 2297 ANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGEDPESYYKNLILSAGKMVLID 2356
Query: 889 RILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPD 948
++LPKLK+ GHRVL+F QM + ++ILEDY YR + + R+DG + R + + +++ P
Sbjct: 2357 KLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPG 2416
Query: 949 SEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMT 1008
S+ F+F+L T+AGGLG+NL ADTVII+DSDWNP DLQAQ R HRIGQ+ V++ RL+
Sbjct: 2417 SDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLC 2476
Query: 1009 VNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPD 1068
N+ E + A KL +D+ V+Q+ M Q S Q + + +D + AV D
Sbjct: 2477 RNTYEREMFDKASMKLGLDKAVLQS-MNTQGSKDGNNKQLSKKEI-EDLLKKGAYGAVMD 2534
Query: 1069 DETVNQMLARSE 1080
D+ +
Sbjct: 2535 DDNAGDKFCEED 2546
Score = 44 (20.5 bits), Expect = 2.1e-92, Sum P(3) = 2.1e-92
Identities = 13/56 (23%), Positives = 29/56 (51%)
Query: 1057 DEEDEEENAVPDDETVNQMLARSEEEF--QTYQRIDAERRKEQGKKSRLIEVSELP 1110
+E ++ P+ E ++++ + EEE +Y++ AE +KE+ +K + P
Sbjct: 3822 EENCSGDSESPEKECEDKVVEKVEEEKGENSYEK--AEEQKEETEKLEKSSIESEP 3875
Score = 42 (19.8 bits), Expect = 3.4e-92, Sum P(3) = 3.4e-92
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 1295 AQIYNEELSLIHE----DSVVL-ESVFTKARQRVESGEDPDE 1331
A + NE + L E +SV+ ES T ++ ++S E P++
Sbjct: 3659 ASVKNEVIDLDDELMTNESVIKKESPVTPIKEEIKSEESPEK 3700
Score = 41 (19.5 bits), Expect = 2.1e-92, Sum P(3) = 2.1e-92
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 254 RAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYI 313
+ EV A D + + K T +EA TEK ++ ++E E+++ ++ +E +
Sbjct: 1798 KMEVDEKANDDQSAVSKAEGSDEKSTDDSNPEEA-TTEKNKESLEIEGEKERVKEGEESV 1856
Score = 40 (19.1 bits), Expect = 2.7e-92, Sum P(3) = 2.7e-92
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 280 KRQGLKEARATEKLEKQQKVEAERKKR 306
+++ +KE + K E +K EA+ + +
Sbjct: 1845 EKERVKEGEESVKKENDEKTEADMENK 1871
Score = 40 (19.1 bits), Expect = 5.6e-92, Sum P(3) = 5.6e-92
Identities = 18/75 (24%), Positives = 38/75 (50%)
Query: 1059 EDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDE 1118
E E + A P+ E + S E+ + ++ + +E+G+ S E +E +E E
Sbjct: 3811 EMEADEAAPNTEENCSGDSESPEK-ECEDKVVEKVEEEKGENS--YEKAEEQK---EETE 3864
Query: 1119 EIEQWAFEAKEEEKA 1133
++E+ + E++ EK+
Sbjct: 3865 KLEKSSIESEPSEKS 3879
Score = 38 (18.4 bits), Expect = 9.1e-92, Sum P(3) = 9.1e-92
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 1114 IKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWL 1158
IK +E E+ E+K ++ + + D+ TEKE L
Sbjct: 3692 IKSEESPEKHDTADNLEDKNSDAEESTKIKGKEDFNPETTEKEAL 3736
>WB|WBGene00007053 [details] [associations]
symbol:chd-7 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR023780 KO:K14437 GeneTree:ENSGT00560000077077
EMBL:FO080504 EMBL:FO080107 RefSeq:NP_491426.2 PaxDb:O61845
EnsemblMetazoa:T04D1.4 GeneID:172079 KEGG:cel:CELE_T04D1.4
UCSC:T04D1.4 CTD:172079 WormBase:T04D1.4 HOGENOM:HOG000213105
InParanoid:O61845 OMA:LLAFRME NextBio:873933 Uniprot:O61845
Length = 2967
Score = 928 (331.7 bits), Expect = 9.6e-92, Sum P(2) = 9.6e-92
Identities = 231/608 (37%), Positives = 346/608 (56%)
Query: 554 NGK-LKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLII 612
NG L+EYQ +G++W++ + N N ILADEMGLGKT+QTI ++ + + ++GPFL++
Sbjct: 1193 NGNSLREYQFEGVDWLLYCYYNAQNCILADEMGLGKTVQTITFLSRIYDYG-IHGPFLVV 1251
Query: 613 VPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA-------------QMKAS--KFN 657
VPLST+ NW EFE W +N + Y GS + R+ LQ K + K +
Sbjct: 1252 VPLSTIQNWVREFETWT-DMNAIVYHGSAYAREVLQQYEVFYDKRHCGAKNWKKNFVKID 1310
Query: 658 VLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKL-THILNTFYVAPHRLLLTGTP 716
L+TT+E V+ D L K+ W+ +IDE HR+KN +CKL + L F + HR+LLTGTP
Sbjct: 1311 ALITTFETVVSDVEFLKKIPWRVCVIDEAHRLKNRNCKLLVNGLLAFRME-HRVLLTGTP 1369
Query: 717 LQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLR 776
LQN + EL++LLNFL P F + +TF + F + T ++V+ +L ++L+
Sbjct: 1370 LQNNIDELFSLLNFLHPQQFDNSATFLEQFGS--CQTDDQVQ-----------KLQEILK 1416
Query: 777 PFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXX 836
P +LRRLK++VE L K E II+ +S +QK YR IL + S
Sbjct: 1417 PMMLRRLKEDVEKSLGPKEETIIEVQLSDMQKKFYR-----AILERNFSHLCKGTSAPS- 1470
Query: 837 XLMNTIVQLRKLCNHPFMFQNIEEKFSD-----HVG-GSGIVSGPDLYRVSGKFELLDRI 890
LMN +++LRK CNHPF+ EE + H ++ L + SGK L++++
Sbjct: 1471 -LMNVMMELRKCCNHPFLINGAEEAIMNDFRLAHPDWDEETLAHKALIQASGKVVLIEKL 1529
Query: 891 LPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSE 950
LPKL+ GH+VL+F QM +++++LE++ + + R+DG + + R + +F+ +S+
Sbjct: 1530 LPKLRKDGHKVLIFSQMVKVLDLLEEFLISMSYPFERIDGNVRGDLRQAAIDRFSKENSD 1589
Query: 951 YFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVN 1010
F+F+L TRAGGLG+NL ADTVIIFDSDWNP DLQAQ R HRIGQK V+V RL+T N
Sbjct: 1590 RFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQKKLVKVYRLITSN 1649
Query: 1011 SVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENA---VP 1067
+ E + A KL +D+ V+Q+ K+ G+ + +D EE ++ A +
Sbjct: 1650 TYEREMFDKASLKLGLDKAVLQSTTA-LKAEGT-------ALSKKDVEELLKKGAYGSIM 1701
Query: 1068 DDETVNQMLARSEEEFQTY-QRIDAERRKEQGKKSRLIEVSELPDWLIKEDE-EIEQWAF 1125
D+E N+ +EE+ +T QR E G+K L + K D+ +I+ F
Sbjct: 1702 DEE--NESSKFNEEDIETILQRRTQTITLEAGQKGSLFAKATFNSSHNKGDDIDIDDPEF 1759
Query: 1126 EAKEEEKA 1133
K EKA
Sbjct: 1760 WTKWAEKA 1767
Score = 38 (18.4 bits), Expect = 9.6e-92, Sum P(2) = 9.6e-92
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 289 ATEKLEKQQKVEAERK--KRQKHQEYI 313
A E LE ++VEA+ K K +K YI
Sbjct: 1077 AAELLEIDKRVEAKIKRFKVKKMSSYI 1103
>TAIR|locus:2054955 [details] [associations]
symbol:ASG3 "ALTERED SEED GERMINATION 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002685
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 IPI:IPI00520375 RefSeq:NP_973689.2 UniGene:At.47803
ProteinModelPortal:F4IV45 SMR:F4IV45 PRIDE:F4IV45
EnsemblPlants:AT2G44980.2 GeneID:819106 KEGG:ath:AT2G44980
OMA:WALMHFC PhylomeDB:F4IV45 ArrayExpress:F4IV45 Uniprot:F4IV45
Length = 877
Score = 878 (314.1 bits), Expect = 9.0e-90, Sum P(2) = 9.0e-90
Identities = 223/642 (34%), Positives = 351/642 (54%)
Query: 553 VNGKLKEYQIKGLEWMVSLFNNNLNGILA-DEMGLGKTIQTIALITYLMEKKKVNGPFLI 611
V LK +Q++G+ W++ + +N +L D+MGLGKT+Q I+ ++YL ++ + GPFL+
Sbjct: 47 VTATLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLV 106
Query: 612 IVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQM-----KASK-----FNVLLT 661
+ PLS W E R+ P++ V+ Y G + R ++ M K+SK F+VLLT
Sbjct: 107 LCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHVKKSSKGHFLPFDVLLT 166
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
TY+ + D+ L+++ W+Y IIDE R+KN + L ++L ++ P RLL+TGTP+QN L
Sbjct: 167 TYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNL 226
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVE----LNEEETILIIRRLHKVLRP 777
ELWAL++F +P +F T +Q+ +A F TG+ + N++ET + L +L
Sbjct: 227 TELWALMHFCMPLVF---GTLDQFLSA-FKETGDGLSGLDVSNDKETY---KSLKFILGA 279
Query: 778 FLLRRLKKE-VESQ---LPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXX 833
F+LRR K +ES LP E + + LQK +Y + K + G
Sbjct: 280 FMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKEL---PGLLELSSGGS 336
Query: 834 XXXXLMNTIVQLRKLCNHPFMFQNIE-EKFSDHVGGSGIVSGPDLYRVSGKFELLDRILP 892
L N ++QLRK C+HP++F IE E F + G L + SGK +LD++L
Sbjct: 337 NHTSLQNIVIQLRKACSHPYLFPGIEPEPFEE---------GEHLVQASGKLLVLDQLLK 387
Query: 893 KLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAP----- 947
+L +GHRVLLF QMT ++IL+D+ R + Y RLDG+ +AE+R +K F+A
Sbjct: 388 RLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSAKTERGL 447
Query: 948 DSEY-----FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVR 1002
DSE F+F++STRAGG+GLNL ADTVI ++ DWNP D QA RAHRIGQ + V
Sbjct: 448 DSEVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVL 507
Query: 1003 VLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEE 1062
+ L+T +SVEE IL A KL + V+ M +++ G + + + D EE
Sbjct: 508 SINLVTEHSVEEVILRRAERKLQLSHNVVGDNMEEKEEDGGDLRSLVFGLQRFDPEEIHN 567
Query: 1063 ENAVPDDETVNQMLARSEEEFQTYQRIDA---ERRKEQGKKSRLIEVSELPDWLIKEDEE 1119
E + D+ + ++ + +E+ Q ++ ERR E L+ + D E
Sbjct: 568 EES--DNLKMVEISSLAEKVVAIRQNVEPDKEERRFEINSSDTLLGNTSSASL----DSE 621
Query: 1120 IEQWAFEAKEEEKALHMGRGSRQRKQVDYTD--SLTEKEWLK 1159
+++ ++ EK R S+ K ++ + +L+E+ L+
Sbjct: 622 LDEASY-LSWVEKLKEAARSSKDEKIIELGNRKNLSEERNLR 662
Score = 37 (18.1 bits), Expect = 9.0e-90, Sum P(2) = 9.0e-90
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 1124 AFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEW 1157
+F A ++ +LHM R + Y D +W
Sbjct: 824 SFSASQKSASLHMPR-------IGYQDGSDRSQW 850
>TAIR|locus:2116747 [details] [associations]
symbol:PKR2 "PICKLE RELATED 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00523018 RefSeq:NP_194918.2 UniGene:At.54572
ProteinModelPortal:F4JTF6 SMR:F4JTF6 PRIDE:F4JTF6
EnsemblPlants:AT4G31900.1 GeneID:829320 KEGG:ath:AT4G31900
OMA:SYWESES ArrayExpress:F4JTF6 Uniprot:F4JTF6
Length = 1202
Score = 559 (201.8 bits), Expect = 1.6e-87, Sum P(3) = 1.6e-87
Identities = 121/325 (37%), Positives = 192/325 (59%)
Query: 758 ELNEEETILIIRRLHKVLRPFLLRRLKKEV-ESQLPDKVEYIIKCDMSGLQKVLYRHMHT 816
++N+EE I RLH++L P LLRRLKK+V + ++P K E I++ DMS QK +Y+ + T
Sbjct: 415 DINKEEQI---SRLHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAVIT 471
Query: 817 KGI-LLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGP 875
+LT + + N +++LR++C+HP++ + E +F D
Sbjct: 472 NNYQVLTKKRDAK---------ISNVLMKLRQVCSHPYLLPDFEPRFED--ANEAFTK-- 518
Query: 876 DLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAE 935
L SGK +LLD+++ KLK GHRVL++ Q + +LEDYF+++ + Y R+DG
Sbjct: 519 -LLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGP 577
Query: 936 DRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRI 995
+R + +FNA +S F F+LSTRAGG+G+NL TADTVII+DSDWNPH DLQA R HR+
Sbjct: 578 ERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRL 637
Query: 996 GQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVI-QAGMFDQKSTGSERHQFLQTILH 1054
GQ N+V + RL+ +VEER++ + K+ ++ V+ + + + ++ +
Sbjct: 638 GQTNKVMIYRLIHKGTVEERMMEITKNKMLLEHLVVGKQHLCQDELDDIIKYGSKELFSE 697
Query: 1055 QDDEEDEEENAVPDDETVNQMLARS 1079
++DE DD + Q+L R+
Sbjct: 698 ENDEAGRSGKIHYDDAAIEQLLDRN 722
Score = 402 (146.6 bits), Expect = 1.6e-87, Sum P(3) = 1.6e-87
Identities = 90/197 (45%), Positives = 120/197 (60%)
Query: 553 VNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLII 612
+ G L YQ++GL ++ ++ N ILADEMGLGKTIQ+IA + L E+ P L++
Sbjct: 221 LTGTLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASLFEENL--SPHLVV 278
Query: 613 VPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ------AQMKASKFNVLLTTYEYV 666
PLST+ NW EF WAP +NVV Y G R + ++ + SKF+VLLTTYE V
Sbjct: 279 APLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYFSEGRKSKFDVLLTTYEMV 338
Query: 667 IKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWA 726
L+ + W MIIDEGHR+KN KL L+ F + H +LLTGTPLQN L EL+A
Sbjct: 339 HPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQF-TSKHIVLLTGTPLQNNLNELFA 397
Query: 727 LLNFLLPSIFKSVSTFE 743
L++FL F S+ F+
Sbjct: 398 LMHFLDADKFGSLEKFQ 414
Score = 54 (24.1 bits), Expect = 4.6e-51, Sum P(3) = 4.6e-51
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 606 NG-PFLIIVPLSTLSNWS-LEFER--WAPSVNVV-AYKGSPHLRKTLQAQMKASKFNVLL 660
NG P L++V L W L + W P AYK PHL+ +++ ++FN +
Sbjct: 68 NGTPTLVVVK-QYLVKWKGLSYLHCSWVPEQEFEKAYKSHPHLK----LKLRVTRFNAAM 122
Query: 661 TTY 663
+
Sbjct: 123 DVF 125
Score = 50 (22.7 bits), Expect = 1.6e-87, Sum P(3) = 1.6e-87
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 1056 DDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSE 1108
D+++ E A D++VN+ +S E FQTY I R + L ++E
Sbjct: 1127 DNKQGRVEMAQSYDQSVNE---KSGESFQTYLDIQPLNRMPRESFKPLEPINE 1176
Score = 45 (20.9 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 1042 GSERHQFLQTILHQDDEEDEEENAVPDDE-TVNQMLARSEEEFQTYQRIDAERRK 1095
G + Q + +DD + EE + +DE ++ + S+EE + + A +RK
Sbjct: 801 GKRKRNGKQVMYAEDDLDGLEEISDEEDEYCLDDLKVTSDEEEEADEPEAARQRK 855
Score = 42 (19.8 bits), Expect = 1.1e-86, Sum P(3) = 1.1e-86
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 1125 FEAKEEEKALHMGRGSRQRKQVDYTD 1150
+E ++ E+ +G+ R KQV Y +
Sbjct: 789 YEVQQAEELSALGKRKRNGKQVMYAE 814
Score = 39 (18.8 bits), Expect = 3.2e-31, Sum P(3) = 3.2e-31
Identities = 26/155 (16%), Positives = 62/155 (40%)
Query: 984 QDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGS 1043
QD+ +++ R+ Q +LR + + +++++ L +D Q ++ T +
Sbjct: 414 QDINKEEQISRLHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITNN 473
Query: 1044 ------ERHQFLQTILHQDDEEDEEENAVPDDET----VNQMLARSEEEFQTYQRIDAE- 1092
+R + +L + + +PD E N+ + E Q +D
Sbjct: 474 YQVLTKKRDAKISNVLMKLRQVCSHPYLLPDFEPRFEDANEAFTKLLEASGKLQLLDKMM 533
Query: 1093 -RRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFE 1126
+ KEQG + + + +L+++ + W +E
Sbjct: 534 VKLKEQGHRVLIYTQFQHTLYLLEDYFTFKNWNYE 568
Score = 38 (18.4 bits), Expect = 2.9e-86, Sum P(3) = 2.9e-86
Identities = 23/83 (27%), Positives = 35/83 (42%)
Query: 1076 LARSEEEFQTYQRIDA-ERRKEQGKK--------SRLIEVSE------LPDWLIKEDEEI 1120
L + + E Q + + A +RK GK+ L E+S+ L D + DEE
Sbjct: 784 LLKDKYEVQQAEELSALGKRKRNGKQVMYAEDDLDGLEEISDEEDEYCLDDLKVTSDEEE 843
Query: 1121 EQWAFEAKEEEKALHMGRGSRQR 1143
E EA + K + R R+R
Sbjct: 844 EADEPEAARQRKPRTVTRPYRKR 866
>UNIPROTKB|F1Q2U2 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:AAEX03011032
Ensembl:ENSCAFT00000017488 Uniprot:F1Q2U2
Length = 898
Score = 553 (199.7 bits), Expect = 5.7e-87, Sum P(2) = 5.7e-87
Identities = 127/302 (42%), Positives = 172/302 (56%)
Query: 556 KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVPL 615
+L+ YQ++G+ W+ F+ IL DEMGLGKT QTIAL YL + GPFLI+ PL
Sbjct: 47 RLRSYQLEGVNWLARCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPL 106
Query: 616 STLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKA-SKFNVLLTTYEYVIKDKGPLA 674
S LSNW+ E ER+AP ++ V Y G R LQ +K S+F+VLLTTYE +KD L
Sbjct: 107 SVLSNWTEEMERFAPGLSCVMYAGDKEERARLQQDLKQESRFHVLLTTYEICLKDSSFLK 166
Query: 675 KLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLNFLLPS 734
W +++DE HR+KN + L L F V LLLTGTP+QN L EL++LL+F+ P
Sbjct: 167 SFPWSVLVVDEAHRLKNQNSLLHKTLLEFSVV-FSLLLTGTPIQNSLQELYSLLSFVEPD 225
Query: 735 IFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDK 794
+F EQ F + +E + LHK+L+PFLLRR+K EV ++LP K
Sbjct: 226 LFPK----EQV--GDFVQRYQDIEKESDSA----SELHKLLQPFLLRRVKAEVATELPKK 275
Query: 795 VEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFM 854
E ++ MS LQK Y K IL+ D + L N + QLRK +HP++
Sbjct: 276 TEVVLYHGMSALQKKYY-----KAILMKD-LDAFESEMAKKVKLQNVLSQLRKCVDHPYL 329
Query: 855 FQ 856
F+
Sbjct: 330 FE 331
Score = 396 (144.5 bits), Expect = 5.7e-87, Sum P(2) = 5.7e-87
Identities = 117/341 (34%), Positives = 171/341 (50%)
Query: 817 KGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFS-DHVGGSGIVSGP 875
K IL+ D + L N + QLRK +HP++F+ F + + +
Sbjct: 293 KAILMKD-LDAFESEMAKKVKLQNVLSQLRKCVDHPYLFEGETVPFFLTLLFMTTPLKNL 351
Query: 876 DLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAE 935
+L +S F L R GHRVLLF QMTQ+++IL+DY YRG+ Y R+DG+ + E
Sbjct: 352 ELAALS--FLFLAR--------GHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGE 401
Query: 936 DRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRI 995
+R +K F F+F+LSTRAGG+G+NL ADTVI DSD+NP DLQA RAHRI
Sbjct: 402 ERHLAIKNFG--QQPVFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRI 459
Query: 996 GQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFD---QKSTGSERHQFLQTI 1052
GQ V+V+RL+ ++VEE + A KL + +I+ G F QK Q + +
Sbjct: 460 GQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNAIIEGGHFTLGAQKPAADADLQLSEIL 519
Query: 1053 LHQDDEEDEEENAVPDDETVNQMLARSEE-EFQTYQRIDAE---RRKEQGKKSR-LIEVS 1107
D+ + + D+ + ++L ++ ++ + E R +E+GK L E
Sbjct: 520 KFGLDKLLSSQGSTMDEIDLERILGETKNGQWISDALATTEGGVREQEEGKNHMYLFEGK 579
Query: 1108 ELPDWLIKEDEE-IEQWAFEAKEE-EKALHMGRGSRQRKQV 1146
+ KED E EQ K EK GR R + V
Sbjct: 580 DYSKEPSKEDRESFEQLVNLQKTFLEKTTQEGRLLRNKGNV 620
Score = 43 (20.2 bits), Expect = 8.8e-50, Sum P(2) = 8.8e-50
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 1234 DSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSS 1280
D+D + LSE +K K L +D +D+++ILG ++G++ S
Sbjct: 510 DADLQ-LSE-ILKFGLDKLLSSQGSTMDE-IDLERILGETKNGQWIS 553
>GENEDB_PFALCIPARUM|PF08_0048 [details] [associations]
symbol:PF08_0048 "ATP-dependent helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 KO:K01509 EMBL:AL844507
RefSeq:XP_002808863.1 EnsemblProtists:PF08_0048:mRNA GeneID:2655499
KEGG:pfa:PF08_0048 EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 627 (225.8 bits), Expect = 6.6e-87, Sum P(3) = 6.6e-87
Identities = 126/308 (40%), Positives = 194/308 (62%)
Query: 552 LVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLI 611
++ L++YQ GL W++ L+ NN+NGILADEMGLGKT+Q I+L++YL + GP L+
Sbjct: 657 IIKATLRDYQHAGLHWLLYLYKNNINGILADEMGLGKTLQCISLLSYLAYYFNIWGPHLV 716
Query: 612 IVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLR-KTLQAQMKASKFNVLLTTYEYVIKDK 670
IVP S L NW +E +R+ P +++Y G+ + R K F++ +++Y V+KD
Sbjct: 717 IVPTSILINWEIELKRFCPCFKILSYYGNQNERYKKRVGWFNKDSFHICISSYSTVVKDH 776
Query: 671 GPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLNF 730
+ WKY+I+DE H +KN + K +I+ + + LL+TGTPLQN L ELW+LL+F
Sbjct: 777 LVFKRKRWKYIILDEAHNIKNFNTKRWNIILSLK-RDNCLLITGTPLQNSLEELWSLLHF 835
Query: 731 LLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQ 790
L+P+IF S F++WF+ P EK +++ + + I RLH V+RP++LRRLKK VE +
Sbjct: 836 LMPNIFTSHLDFKEWFSDPLNLAIEKSKIHHSKEL--IDRLHTVIRPYILRRLKKNVEKE 893
Query: 791 LPDKVEYIIKCDMSGLQKVLY-RHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLC 849
+P+K E+IIKC ++ Q++LY ++ K + T LMN ++QLRK+C
Sbjct: 894 MPNKYEHIIKCKLTRRQQILYDEFINNKNVQNT-------LNTGNYIGLMNILIQLRKVC 946
Query: 850 NHPFMFQN 857
NH +F N
Sbjct: 947 NHCDLFTN 954
Score = 344 (126.2 bits), Expect = 6.6e-87, Sum P(3) = 6.6e-87
Identities = 70/169 (41%), Positives = 103/169 (60%)
Query: 876 DLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAE 935
D+ SGK L+++L K K G++ LLF Q ++++ILE + ++ + ++RLDG+TK E
Sbjct: 1762 DISLGSGKLCALEKLLSKCKREGNKCLLFTQFIKMLDILEIFLNHLNYSFIRLDGSTKVE 1821
Query: 936 DRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRI 995
R ++ KFN D FIF+ STR+G +G+NL A+ VI +D+DWNP D QA DR HRI
Sbjct: 1822 QRQKIVTKFNN-DKSIFIFISSTRSGSIGINLTAANVVIFYDTDWNPSIDKQAMDRCHRI 1880
Query: 996 GQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSE 1044
GQ +V V R + +VEE I K +D I G F+ +T S+
Sbjct: 1881 GQTKDVHVFRFVCEYTVEENIWKKQLQKRKLDNICINMGNFNNSNTHSK 1929
Score = 43 (20.2 bits), Expect = 6.6e-87, Sum P(3) = 6.6e-87
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 291 EKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAV-MNYHANA 348
+K E QQ + +KK + ++++ ++ KD R+N A + NK V M+ + N+
Sbjct: 159 KKRELQQTLN--KKKEMRFKKFVKEAIKKIKDA----RHNNAHELFENKYVSMSSNNNS 211
Score = 39 (18.8 bits), Expect = 6.1e-55, Sum P(3) = 6.1e-55
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 1055 QDDEEDEEENAVPDDETVNQMLA 1077
+ D D+EE DDE +N L+
Sbjct: 1630 EKDNCDDEEKDNCDDEDMNSNLS 1652
Score = 37 (18.1 bits), Expect = 8.2e-24, Sum P(3) = 8.2e-24
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 573 NNNLNGILADEM 584
+NN+N +L+ EM
Sbjct: 1123 HNNMNNLLSKEM 1134
>UNIPROTKB|C0H4W3 [details] [associations]
symbol:PF08_0048 "Probable ATP-dependent helicase
PF08_0048" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0016020
"membrane" evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016020
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0016568
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GO:GO:0008026 KO:K01509 EMBL:AL844507 RefSeq:XP_002808863.1
EnsemblProtists:PF08_0048:mRNA GeneID:2655499 KEGG:pfa:PF08_0048
EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 627 (225.8 bits), Expect = 6.6e-87, Sum P(3) = 6.6e-87
Identities = 126/308 (40%), Positives = 194/308 (62%)
Query: 552 LVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLI 611
++ L++YQ GL W++ L+ NN+NGILADEMGLGKT+Q I+L++YL + GP L+
Sbjct: 657 IIKATLRDYQHAGLHWLLYLYKNNINGILADEMGLGKTLQCISLLSYLAYYFNIWGPHLV 716
Query: 612 IVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLR-KTLQAQMKASKFNVLLTTYEYVIKDK 670
IVP S L NW +E +R+ P +++Y G+ + R K F++ +++Y V+KD
Sbjct: 717 IVPTSILINWEIELKRFCPCFKILSYYGNQNERYKKRVGWFNKDSFHICISSYSTVVKDH 776
Query: 671 GPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLNF 730
+ WKY+I+DE H +KN + K +I+ + + LL+TGTPLQN L ELW+LL+F
Sbjct: 777 LVFKRKRWKYIILDEAHNIKNFNTKRWNIILSLK-RDNCLLITGTPLQNSLEELWSLLHF 835
Query: 731 LLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQ 790
L+P+IF S F++WF+ P EK +++ + + I RLH V+RP++LRRLKK VE +
Sbjct: 836 LMPNIFTSHLDFKEWFSDPLNLAIEKSKIHHSKEL--IDRLHTVIRPYILRRLKKNVEKE 893
Query: 791 LPDKVEYIIKCDMSGLQKVLY-RHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLC 849
+P+K E+IIKC ++ Q++LY ++ K + T LMN ++QLRK+C
Sbjct: 894 MPNKYEHIIKCKLTRRQQILYDEFINNKNVQNT-------LNTGNYIGLMNILIQLRKVC 946
Query: 850 NHPFMFQN 857
NH +F N
Sbjct: 947 NHCDLFTN 954
Score = 344 (126.2 bits), Expect = 6.6e-87, Sum P(3) = 6.6e-87
Identities = 70/169 (41%), Positives = 103/169 (60%)
Query: 876 DLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAE 935
D+ SGK L+++L K K G++ LLF Q ++++ILE + ++ + ++RLDG+TK E
Sbjct: 1762 DISLGSGKLCALEKLLSKCKREGNKCLLFTQFIKMLDILEIFLNHLNYSFIRLDGSTKVE 1821
Query: 936 DRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRI 995
R ++ KFN D FIF+ STR+G +G+NL A+ VI +D+DWNP D QA DR HRI
Sbjct: 1822 QRQKIVTKFNN-DKSIFIFISSTRSGSIGINLTAANVVIFYDTDWNPSIDKQAMDRCHRI 1880
Query: 996 GQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSE 1044
GQ +V V R + +VEE I K +D I G F+ +T S+
Sbjct: 1881 GQTKDVHVFRFVCEYTVEENIWKKQLQKRKLDNICINMGNFNNSNTHSK 1929
Score = 43 (20.2 bits), Expect = 6.6e-87, Sum P(3) = 6.6e-87
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 291 EKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAV-MNYHANA 348
+K E QQ + +KK + ++++ ++ KD R+N A + NK V M+ + N+
Sbjct: 159 KKRELQQTLN--KKKEMRFKKFVKEAIKKIKDA----RHNNAHELFENKYVSMSSNNNS 211
Score = 39 (18.8 bits), Expect = 6.1e-55, Sum P(3) = 6.1e-55
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 1055 QDDEEDEEENAVPDDETVNQMLA 1077
+ D D+EE DDE +N L+
Sbjct: 1630 EKDNCDDEEKDNCDDEDMNSNLS 1652
Score = 37 (18.1 bits), Expect = 8.2e-24, Sum P(3) = 8.2e-24
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 573 NNNLNGILADEM 584
+NN+N +L+ EM
Sbjct: 1123 HNNMNNLLSKEM 1134
>FB|FBgn0262519 [details] [associations]
symbol:Mi-2 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=IDA;NAS] [GO:0005634
"nucleus" evidence=ISS;IDA;NAS] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0016581 "NuRD complex" evidence=ISS;TAS]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0031491 "nucleosome binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 EMBL:AE014296 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005700 GO:GO:0042766 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF119716 EMBL:AY113368 RefSeq:NP_001163476.1
RefSeq:NP_649154.2 UniGene:Dm.28317 ProteinModelPortal:O97159
SMR:O97159 DIP:DIP-22862N IntAct:O97159 MINT:MINT-864813
STRING:O97159 PaxDb:O97159 EnsemblMetazoa:FBtr0074919
EnsemblMetazoa:FBtr0302046 GeneID:40170 KEGG:dme:Dmel_CG8103
CTD:40170 FlyBase:FBgn0262519 InParanoid:O97159 OrthoDB:EOG4T76J4
ChiTaRS:Mi-2 GenomeRNAi:40170 NextBio:817384 Bgee:O97159
GermOnline:CG8103 Uniprot:O97159
Length = 1982
Score = 859 (307.4 bits), Expect = 1.8e-86, Sum P(2) = 1.8e-86
Identities = 220/624 (35%), Positives = 346/624 (55%)
Query: 556 KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVPL 615
+L YQI+G+ W+ + ++ ILADEMGLGKTIQT+ + L ++ GPFL+ VPL
Sbjct: 729 QLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPL 788
Query: 616 STLSNWSLEFERWAPSVNVVAYKGSPHLRKTL--------QAQMKASKFNVLLTT-YEY- 665
STL NW EFE WAP + Y G R + + ++ SK + L TT Y++
Sbjct: 789 STLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQYKFN 848
Query: 666 VIKDKGPLAKLHWKYM-IIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPEL 724
V+ L + + ID + + +L + F+ R+L + T + KL
Sbjct: 849 VLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFF----RILNSYT-IAYKLLLT 903
Query: 725 WALLNFLLPSIFKSVSTFEQ-WFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 783
L L +F ++ + FN A GE ++++EE + +RLH++L P +LRRL
Sbjct: 904 GTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSKEEQV---KRLHEMLGPHMLRRL 960
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIV 843
K +V +P K E+I++ ++S +QK Y+ + TK + L+N ++
Sbjct: 961 KTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCS-----LINIMM 1015
Query: 844 QLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLL 903
L+K CNHP++F + E+ + GG ++ L + +GK LL ++L +LK+ HRVL+
Sbjct: 1016 DLKKCCNHPYLFPSAAEEATTAAGGLYEINS--LTKAAGKLVLLSKMLKQLKAQNHRVLI 1073
Query: 904 FCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGL 963
F QMT++++ILED+ +KY R+DG R + + +FNAP ++ F+F+LSTRAGGL
Sbjct: 1074 FSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGL 1133
Query: 964 GLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYK 1023
G+NL TADTVII+DSDWNPH D+QA RAHRIGQ N+V + R +T NSVEER+ A+ K
Sbjct: 1134 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRK 1193
Query: 1024 LNMDEKVIQAGMFDQKSTGSERHQFLQTILH--QDD--EEDEEENAVP-DDETVNQMLAR 1078
+ + V++ GM + + ++ Q L IL +D +ED++E A+ DD+ V ++L R
Sbjct: 1194 MMLTHLVVRPGMGGKGANFTK--QELDDILRFGTEDLFKEDDKEEAIHYDDKAVAELLDR 1251
Query: 1079 SE---EEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQ---WA------FE 1126
+ EE +++ K ++ E E + +IK+D E W +E
Sbjct: 1252 TNRGIEEKESWANEYLSSFKVASYATKEEEEEEETE-IIKQDAENSDPAYWVKLLRHHYE 1310
Query: 1127 AKEEEKALHMGRGSRQRKQVDYTD 1150
+E+ +G+G R RKQV+YTD
Sbjct: 1311 QHQEDVGRSLGKGKRVRKQVNYTD 1334
Score = 51 (23.0 bits), Expect = 1.8e-86, Sum P(2) = 1.8e-86
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 278 RTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEY 326
R K++G K R T K E++ + + +RKK + ++ + +QH ++ EY
Sbjct: 51 RRKKKGKK--RKTRKGEEKGRKKKKRKKNESEED--SDFVQHDEEV-EY 94
Score = 44 (20.5 bits), Expect = 9.7e-86, Sum P(2) = 9.7e-86
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 274 KAYKRTKRQGLKEARATEKLEKQQKVE-AERKKRQKHQEYITT 315
K KR R+G ++ R +K +K + E ++ + + EY +T
Sbjct: 55 KGKKRKTRKGEEKGRKKKKRKKNESEEDSDFVQHDEEVEYPST 97
>TAIR|locus:2041644 [details] [associations]
symbol:CHR5 "chromatin remodeling 5" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0009506 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907 KO:K11367
IPI:IPI00521189 RefSeq:NP_178970.3 UniGene:At.40665 PRIDE:F4IV99
EnsemblPlants:AT2G13370.1 GeneID:815823 KEGG:ath:AT2G13370
OMA:ARNTKSY Uniprot:F4IV99
Length = 1724
Score = 845 (302.5 bits), Expect = 1.8e-86, Sum P(3) = 1.8e-86
Identities = 223/600 (37%), Positives = 331/600 (55%)
Query: 547 EQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVN 606
EQ L+ G L++YQ++GL ++V+ + N+ N ILADEMGLGKT+Q+++++ +L +++
Sbjct: 615 EQPEWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIP 674
Query: 607 GPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYV 666
GPFL++VPLSTL+NW+ EF +W P +N++ Y G+ R+ Q YE+
Sbjct: 675 GPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQQ-------------YEFY 721
Query: 667 IKDK-GPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELW 725
+ K G K + + + K K+ I A HRL + L L E
Sbjct: 722 NEKKVGRPIKFNALLTTYEVVLKDKAVLSKIKWIYLMVDEA-HRLKNSEAQLYTALLEFS 780
Query: 726 ALLNFLLPSIFKSVSTFEQW----FNAP--FATTGEKVE-------LNEEETILIIRRLH 772
L+ S E W F P F E VE NE E + LH
Sbjct: 781 TKNKLLITGTPLQNSVEELWALLHFLDPGKFKNKDEFVENYKNLSSFNESE----LANLH 836
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
LRP +LRR+ K+VE LP K+E I++ +MS LQK Y K IL + +
Sbjct: 837 LELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYY-----KWILERNFHDLNKGVR 891
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRV---SGKFELLDR 889
L+N +V+L+K CNHPF+F++ +DH G I L ++ SGK +LD+
Sbjct: 892 GNQVSLLNIVVELKKCCNHPFLFES-----ADHGYGGDINDNSKLDKIILSSGKLVILDK 946
Query: 890 ILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDS 949
+L +L+ T HRVL+F QM ++++IL +Y S RGF++ RLDG+TKAE R + FNAP S
Sbjct: 947 LLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPAS 1006
Query: 950 EYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTV 1009
+ F F+LSTRAGGLG+NL TADTV+IFDSDWNP DLQA RAHRIGQ+ V + R +T
Sbjct: 1007 DDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTS 1066
Query: 1010 NSVEERILAAARYKLNMDEKVIQA----GMFDQKST--GS--ERHQFLQTILHQDDEE-- 1059
SVEE IL A+ K+ +D VIQ G +++ T GS ++++ L IL EE
Sbjct: 1067 KSVEEEILERAKRKMVLDHLVIQKLNAEGRLEKRETKKGSNFDKNE-LSAILRFGAEELF 1125
Query: 1060 DEEENAVPDDETVNQMLARSEEEFQTYQRID-AERRKEQGKKSRLIEVSELPDWLIKEDE 1118
E++N D+E+ ++L+ +E +R + E + + L+ ++ ++ ED+
Sbjct: 1126 KEDKN---DEESKKRLLSMDIDEI--LERAEQVEEKHTDETEHELLGAFKVANFCNAEDD 1180
Score = 49 (22.3 bits), Expect = 1.8e-86, Sum P(3) = 1.8e-86
Identities = 22/74 (29%), Positives = 32/74 (43%)
Query: 1264 MDIKKILGRIEDGKYSSVDELQKDFKTLCRNAQIYNEE------LSLIHEDSVVL--ESV 1315
MDI +IL R E + DE + + + A N E I DSVV E++
Sbjct: 1141 MDIDEILERAEQVEEKHTDETEHELLGAFKVANFCNAEDDGSFWSRWIKPDSVVTAEEAL 1200
Query: 1316 FTKARQRVESGEDP 1329
+A + +S DP
Sbjct: 1201 APRAARNTKSYVDP 1214
Score = 38 (18.4 bits), Expect = 1.8e-86, Sum P(3) = 1.8e-86
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 541 VHEIVTEQASILVNGKLKEYQ-IKG 564
+ E + SI V GK+ E Q KG
Sbjct: 582 IDEYKAREVSIAVQGKMVEQQRTKG 606
>ASPGD|ASPL0000052010 [details] [associations]
symbol:AN1255 species:162425 "Emericella nidulans"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0060303 "regulation of nucleosome density" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:BN001308 GO:GO:0003677 EMBL:AACD01000017
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
KO:K11367 HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB RefSeq:XP_658859.1
ProteinModelPortal:Q5BDX5 STRING:Q5BDX5
EnsemblFungi:CADANIAT00001368 GeneID:2877029 KEGG:ani:AN1255.2
OMA:GPRRMAI Uniprot:Q5BDX5
Length = 1517
Score = 826 (295.8 bits), Expect = 7.8e-86, Sum P(2) = 7.8e-86
Identities = 190/502 (37%), Positives = 287/502 (57%)
Query: 550 SILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPF 609
S L NG+LKE+Q+KG+ +M + N N +LADEMGLGKT+QT+A I++L ++ GPF
Sbjct: 439 SFLHNGQLKEFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVAFISWLRHVRRQQGPF 498
Query: 610 LIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKD 669
+++VPLST+ +W+ F+ W+P +N V Y G+ R L+ ++ +++ +
Sbjct: 499 VVVVPLSTMPSWAETFDNWSPDLNYVVYNGNEASRNVLK------EYELMVDGNPR--RP 550
Query: 670 KGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLN 729
K + ++Y+++D + + + + HRL + L KL E +
Sbjct: 551 KFNVLLTTYEYVLVDSSF-LSQFNWQFMAVDEA-----HRLKNRDSQLYIKLQEFNSPAR 604
Query: 730 FLLPSI-----FKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 784
L+ +S + N ++LN E + L K + PF+LRR K
Sbjct: 605 LLITGTPIQNNLAELSALLDFLNPGLVNVDADMDLNSEAASEKLAELTKAISPFMLRRTK 664
Query: 785 KEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGIL-LTDGSEXXXXXXXXXXXLMNTIV 843
+VES LP K E II+ ++S +Q Y+++ TK L +G++ L+N ++
Sbjct: 665 TKVESDLPPKTEKIIRVELSDVQLEYYKNILTKNYAALNEGTKGQKQS------LLNIMM 718
Query: 844 QLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRV----SGKFELLDRILPKLKSTGH 899
+L+K NHPFMF + E K + G D+ R SGK LLD++L KLK GH
Sbjct: 719 ELKKASNHPFMFPSAETKILE-----GSTRREDVLRALITSSGKMMLLDQLLAKLKRDGH 773
Query: 900 RVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTR 959
RVL+F QM ++++IL DY YRG+ Y RLDGT + R ++ +NAPDS F F+LSTR
Sbjct: 774 RVLIFSQMVKMLDILGDYMEYRGYTYQRLDGTIPSASRRLAIEHYNAPDSSDFAFILSTR 833
Query: 960 AGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAA 1019
AGGLG+NL TADTVI+FDSDWNP DLQA RAHRIGQ V V RL++ ++VEE ++
Sbjct: 834 AGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSKDTVEEEVIER 893
Query: 1020 ARYKLNMDEKVIQAGMFDQKST 1041
AR KL ++ IQ G+ D++++
Sbjct: 894 ARNKLLLEFITIQRGVTDKEAS 915
Score = 72 (30.4 bits), Expect = 7.8e-86, Sum P(2) = 7.8e-86
Identities = 38/142 (26%), Positives = 62/142 (43%)
Query: 998 KNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSER---HQF-LQTIL 1053
K ++ ++ +E+ LA + N K I AG D++ T +ER Q +Q +
Sbjct: 1011 KEQLEEIKAEEKKKADEKYLADV-IEQNRPRKRIVAG--DERDTRAERKAKRQARVQVSM 1067
Query: 1054 HQDDEEDEEENAVPDDET--VNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPD 1111
+ DD +D E NA D + V + F Y I+ +R +E +++RL E D
Sbjct: 1068 NDDDGDDSEPNAKADPKRPLVEKEYRHLLRAFLRYGDIE-DREEEVIREARLTERDR--D 1124
Query: 1112 WLIKEDEEIEQWAFEAKEEEKA 1133
+ EI A E E+ A
Sbjct: 1125 TVKSALREITDKAAELVREDVA 1146
>ASPGD|ASPL0000048785 [details] [associations]
symbol:AN1956 species:162425 "Emericella nidulans"
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0033553 "rDNA
heterochromatin" evidence=IEA] [GO:0044732 "mitotic spindle pole
body" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0031934 "mating-type region heterochromatin"
evidence=IEA] [GO:0031933 "telomeric heterochromatin" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR000014 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00091 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 EMBL:BN001307 GO:GO:0008270 GO:GO:0004871
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACD01000029 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OrthoDB:EOG4GQTD1 RefSeq:XP_659560.1 ProteinModelPortal:Q5BBX4
EnsemblFungi:CADANIAT00008616 GeneID:2875239 KEGG:ani:AN1956.2
HOGENOM:HOG000192830 OMA:SFARVWA Uniprot:Q5BBX4
Length = 1443
Score = 865 (309.6 bits), Expect = 1.3e-85, P = 1.3e-85
Identities = 228/629 (36%), Positives = 338/629 (53%)
Query: 548 QASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNG 607
Q I+ G++ +YQ GL W+ + N ILADEMGLGKTIQ I L+ L++ K
Sbjct: 597 QPRIMTGGEIMDYQRDGLNWLYFKWFKQQNAILADEMGLGKTIQVIGLLATLVQDHKC-W 655
Query: 608 PFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQ---MKAS---KFNVLLT 661
PFLI+VP ST NW E + W PS+ V Y GS RK Q ++ + +V++T
Sbjct: 656 PFLIVVPNSTCPNWRKELKTWVPSLRAVTYYGSSLARKMAQEHEMFIRGDPDLRCHVVIT 715
Query: 662 TYEYVIKD--KGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQN 719
+YE ++ D + L+++ W +I+DEG R+K+ ++ L+ P ++L+TGTPLQN
Sbjct: 716 SYETMVDDSCRKVLSRIPWAGLIVDEGQRLKSDKSQIYEGLSKMKF-PFKVLMTGTPLQN 774
Query: 720 KLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFL 779
EL+ LL F S K+ E+ + L++E I LH+++RPF
Sbjct: 775 NTKELFNLLQFCDQS--KNAEELEEKYGT----------LSKEN----IPELHELIRPFF 818
Query: 780 LRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDG-----SEXXXXXXXX 834
LRR K +V + LP V+ I+ MS LQK LY+ + K L E
Sbjct: 819 LRRTKAQVLTFLPPVVQIIVPVTMSVLQKKLYKSILAKNTQLIKAIFQRNEEDQPLKQTE 878
Query: 835 XXXLMNTIVQLRKLCNHPFMFQN-IEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPK 893
L N ++QLRK HPF+F IEE+ D V+ +L +GK +LL+ +LPK
Sbjct: 879 RHNLNNILMQLRKCLCHPFIFSKAIEERTDDPE-----VAHRNLVDAAGKLQLLELMLPK 933
Query: 894 LKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFI 953
L++ GHRVL+F Q + ++++ED+ G + RLDG + ++ ++ +NA +S YF
Sbjct: 934 LQARGHRVLVFSQFLENLDVMEDFLDGLGLPHRRLDGRMTSLEKQRMIDDYNAENSPYFA 993
Query: 954 FVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVE 1013
F+LSTR+GG+G+NL TADTVII D D+NPHQD+QA RAHRIGQKN+V V +LM S E
Sbjct: 994 FLLSTRSGGVGINLATADTVIIMDPDFNPHQDMQALSRAHRIGQKNKVLVFQLMIRGSAE 1053
Query: 1014 ERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVN 1073
E+I+ R K+ +D +I M + G + L+ ++D + + E+V+
Sbjct: 1054 EKIMQIGRKKMVLDHVLIDR-MAAEDDDGEDLESILRHGAKALFDDDNSGDIIYTSESVD 1112
Query: 1074 QMLARSEEEFQTYQ--RIDAER--------RKEQGKKSRLIEVSELPDWLIKEDEEIEQW 1123
++L RS+ E T + A QG + +L E P + E+I Q
Sbjct: 1113 RLLDRSQAEQATNPDTNVSASEFSFAQVWAADSQGLEDQLNVAEEDPTISNQTWEKILQE 1172
Query: 1124 AFEAKEEE---KALHMGRGSRQRKQVDYT 1149
A EE KA +GRG R+R VDY+
Sbjct: 1173 RERAAAEEARKKAEILGRGKRKRATVDYS 1201
>POMBASE|SPAC1783.05 [details] [associations]
symbol:hrp1 "ATP-dependent DNA helicase Hrp1"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000779 "condensed chromosome, centromeric
region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0007076 "mitotic chromosome
condensation" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0016592 "mediator complex"
evidence=IPI] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0035067 "negative
regulation of histone acetylation" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0048096 "chromatin-mediated maintenance
of transcription" evidence=TAS] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 PomBase:SPAC1783.05 Pfam:PF00385 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944
GO:GO:0030466 GO:GO:0000122 GO:GO:0000790 GO:GO:0030702
GO:GO:0004003 GO:GO:0007076 GO:GO:0048096 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000779 GO:GO:0035067 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0016592 GO:GO:0006369 KO:K11367
HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB EMBL:X99021 EMBL:AB027852
PIR:T43334 PIR:T50107 RefSeq:NP_593660.1 ProteinModelPortal:Q9US25
MINT:MINT-4979817 STRING:Q9US25 EnsemblFungi:SPAC1783.05.1
GeneID:2542363 KEGG:spo:SPAC1783.05 OMA:VERVIKW NextBio:20803422
GO:GO:0060303 Uniprot:Q9US25
Length = 1373
Score = 831 (297.6 bits), Expect = 4.7e-82, P = 4.7e-82
Identities = 216/616 (35%), Positives = 333/616 (54%)
Query: 547 EQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVN 606
+Q S + G+++++Q+ G+ WM L++ N NGILADEMGLGKT+QT+ ++YL+ K +
Sbjct: 380 KQPSYIKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLKQH 439
Query: 607 GPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYV 666
GPFLI+VPLST+ W W P +N + Y G+ R ++ ++ L+T
Sbjct: 440 GPFLIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIR------EYEFYLSTNSRK 493
Query: 667 IKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWA 726
+K L ++Y++ D+ + N + I HRL + + L L +
Sbjct: 494 LKFNILLTT--YEYILKDK-QELNNIRWQYLAIDEA-----HRLKNSESSLYETLSQFRT 545
Query: 727 LLNFLLPSIFKSVSTFEQWFNAPFATTGE---KVELNEE----ETILIIRRLHKVLRPFL 779
L+ + E F G+ + ELN + E IR L + L+PF+
Sbjct: 546 ANRLLITGTPLQNNLKELASLVNFLMPGKFYIRDELNFDQPNAEQERDIRDLQERLQPFI 605
Query: 780 LRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLM 839
LRRLKK+VE LP K E I++ ++S +Q Y+++ TK G L+
Sbjct: 606 LRRLKKDVEKSLPSKSERILRVELSDMQTEWYKNILTKNYRALTGH----TDGRGQLSLL 661
Query: 840 NTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRV---SGKFELLDRILPKLKS 896
N +V+L+K+ NHP++F EK+ + G + L + SGK LLD++L +LK
Sbjct: 662 NIVVELKKVSNHPYLFPGAAEKW---MMGRKMTREDTLRGIIMNSGKMVLLDKLLQRLKH 718
Query: 897 TGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVL 956
GHRVL+F QM +++NIL +Y S RG+ Y RLDGT A R + FNAPDS F+F+L
Sbjct: 719 DGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLL 778
Query: 957 STRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERI 1016
STRAGGLG+NL TADTVIIFDSDWNP DLQA RAHRIGQKN V V R ++ ++VEE I
Sbjct: 779 STRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDI 838
Query: 1017 LAAARYKLNMDEKVIQAGMFDQ-KSTGSERH--QFLQTILH--QDDEEDEEENAVP-DDE 1070
L AR K+ ++ +I G+ ++ K++ ++++ Q L IL + EN ++
Sbjct: 839 LERARRKMILEYAIISLGVTEKSKNSKNDKYDAQELSAILKFGASNMFKATENQKKLENM 898
Query: 1071 TVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEA-KE 1129
++ +L+ +E+ + A E+ K EV++ + D+ I + E +E
Sbjct: 899 NLDDILSHAEDRDSSNDVGGASMGGEEFLKQ--FEVTDYKAEDLNWDDIIPEEEMERIEE 956
Query: 1130 EEKALHMGRGSRQRKQ 1145
EE+ L R + ++
Sbjct: 957 EERMLAAQRAKEEERE 972
>POMBASE|SPBP35G2.10 [details] [associations]
symbol:mit1 "SHREC complex subunit Mit1" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000183 "chromatin silencing at rDNA" evidence=IMP] [GO:0000790
"nuclear chromatin" evidence=IC] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006342 "chromatin silencing" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IMP] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0019787 "small conjugating protein
ligase activity" evidence=ISM] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031933 "telomeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0033553 "rDNA heterochromatin"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0070824 "SHREC complex" evidence=IDA] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00490 PomBase:SPBP35G2.10 Prosite:PS00518 GO:GO:0005524
GO:GO:0044732 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0030466
GO:GO:0000122 GO:GO:0000790 GO:GO:0030702 GO:GO:0000183
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
GO:GO:0005721 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016584 GO:GO:0019787 GO:GO:0033553
GO:GO:0016581 GO:GO:0031933 RefSeq:NP_595385.1
ProteinModelPortal:Q9P793 STRING:Q9P793 EnsemblFungi:SPBP35G2.10.1
GeneID:2541336 KEGG:spo:SPBP35G2.10 OrthoDB:EOG4GQTD1
NextBio:20802445 Uniprot:Q9P793
Length = 1418
Score = 823 (294.8 bits), Expect = 4.1e-81, P = 4.1e-81
Identities = 217/607 (35%), Positives = 335/607 (55%)
Query: 548 QASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNG 607
Q S + G L YQ+KGL W+ + + ILADEMGLGKT+Q I+ I+ L + K
Sbjct: 547 QPSFIKGGTLMPYQLKGLNWLYLRWYTHHPCILADEMGLGKTVQVISFISVLFYRHKCF- 605
Query: 608 PFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTL-------QAQMKASKFNVLL 660
P L+IVP +T++NW E ++WAP + + GS R + Q K +VL+
Sbjct: 606 PVLVIVPHATVANWERELKKWAPFLQINVLVGSEKNRSLVRDYRLINQKDPKHVSTHVLV 665
Query: 661 TTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNK 720
+ V ++ L K WK +I+DEG R+KN L + L++ + +LLLTGTPLQN
Sbjct: 666 ISASNVEREISLLRKFQWKVLIVDEGQRLKNDQSSLFYYLSSVK-SDFKLLLTGTPLQNN 724
Query: 721 LPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLL 780
+ EL+ LL FL P K NA A ++ + + E + LH++L+PF L
Sbjct: 725 VRELFNLLQFLNP--MK--------INA--AELEKRYSIIDTEKVT---ELHQILKPFFL 769
Query: 781 RRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILL----TDGSEXXXXXXXXXX 836
RR+K EV P KVE II M+ +QK LY+ + +K + L T +
Sbjct: 770 RRVKSEVLDNFPTKVEVIIPLSMTPVQKGLYKSILSKNLSLLRNITGYANTSSSGGQRTT 829
Query: 837 XLMNTIVQLRKLCNHPFMFQ-NIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLK 895
L N ++QLRK HP+++ +IE++ + ++ L S KF +L ++PKL
Sbjct: 830 SLNNILMQLRKTLAHPYIYSPDIEDRNLPYE-----LAMRSLEEASCKFLILRLLVPKLI 884
Query: 896 STGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
+ GHR+LLF Q Q ++ILED+F Y+ Y R DG + +R + FNAP+SE F+
Sbjct: 885 TRGHRILLFSQFIQQLDILEDWFEYKNIAYARFDGASSEMERQSAIDSFNAPNSELSCFL 944
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
LSTRAGG+G+NL +ADTVII D D+NPHQD+QA RAHR GQK +V V L T +SVEE+
Sbjct: 945 LSTRAGGVGINLASADTVIILDPDFNPHQDMQAIARAHRYGQKKKVLVFVLTTRDSVEEK 1004
Query: 1016 ILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDD----EEDEEENAVPDDE- 1070
I+ A+ KL +D ++++ DQ SE+ L++IL EE +E ++ +E
Sbjct: 1005 IIQNAQKKLVLDHLIVES--LDQNHN-SEKD--LESILRHGARALFEEAGDEPSIKYNEY 1059
Query: 1071 TVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPD--WLIKED---EEIEQWAF 1125
+V +++ +E++ T +++ + + R+ + + + +KE+ +E + W+
Sbjct: 1060 SVELLISEAEKQEDT-STDESDIKSNKFGFFRVWDNKHISSNHYEVKENVLVDEEDVWSV 1118
Query: 1126 EAKEEEK 1132
K+ EK
Sbjct: 1119 ILKQREK 1125
>FB|FBgn0032157 [details] [associations]
symbol:Etl1 "Etl1 homologue" species:7227 "Drosophila
melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:AE014134 GO:GO:0003677
GO:GO:0006281 GO:GO:0016568 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 OMA:KEERYMA EMBL:AY060597
RefSeq:NP_001033889.1 RefSeq:NP_001033890.1 RefSeq:NP_609320.2
UniGene:Dm.3953 ProteinModelPortal:Q9VL72 SMR:Q9VL72 IntAct:Q9VL72
STRING:Q9VL72 PRIDE:Q9VL72 EnsemblMetazoa:FBtr0079901 GeneID:34311
KEGG:dme:Dmel_CG5899 UCSC:CG5899-RA FlyBase:FBgn0032157
InParanoid:Q9VL72 PhylomeDB:Q9VL72 GenomeRNAi:34311 NextBio:787873
Bgee:Q9VL72 Uniprot:Q9VL72
Length = 844
Score = 482 (174.7 bits), Expect = 6.6e-80, Sum P(2) = 6.6e-80
Identities = 118/322 (36%), Positives = 177/322 (54%)
Query: 545 VTEQASILVNG-KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKK 603
+ EQ +L +G +L +YQI GL W+ + +NGILADEMGLGKTIQ IA + YL E
Sbjct: 276 IVEQPKLLSSGLQLADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENG 335
Query: 604 KVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKA---SKFNVLL 660
LI+VP STL NW E RW P + V Y GS R+ ++ + + F+VLL
Sbjct: 336 LSQAAHLIVVPSSTLDNWEAEISRWCPELVVEKYHGSQDERRRMRGRFAKDGFTGFDVLL 395
Query: 661 TTYEYV--IKDKGPLAKL-HWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPL 717
TTY V ++ + ++ Y+I DE H +KN + L T A R+LLTGTPL
Sbjct: 396 TTYHIVGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITIN-ARMRILLTGTPL 454
Query: 718 QNKLPELWALLNFLLPSIF-KSVSTFEQWFNAPFATTGEKVELNE-EETILIIRRLHKVL 775
QN L EL +LL F++P F KS+ + F + G++ E+++ +ET I+R +++
Sbjct: 455 QNNLLELISLLCFVMPKFFAKSIEDIKSLFAKKGKSDGDQDEVSQFQETQ--IQRAKRIM 512
Query: 776 RPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXX 835
+PF+LRRLKK+V LP K+ + K MS QK+ Y + + E
Sbjct: 513 KPFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHEL--VDYYSNNKGEVCSSSERAG 570
Query: 836 XXLMNTIVQLRKLCNHPFMFQN 857
+M +++R++ NHP + ++
Sbjct: 571 IAIM---MEMRRIANHPLLMRH 589
Score = 404 (147.3 bits), Expect = 6.6e-80, Sum P(2) = 6.6e-80
Identities = 87/194 (44%), Positives = 125/194 (64%)
Query: 875 PD-LYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTK 933
PD L SGKF LD +LPKLK+ GHRVLLF Q T +++I+E+Y R F + RLDG T
Sbjct: 644 PDNLICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATA 703
Query: 934 AEDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAH 993
R DL+ FN DS F+F+LST+AGG+G+NL ADT +I D D+NP+ D QA+DR H
Sbjct: 704 VNVRQDLITDFNGDDS-IFVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQAEDRCH 762
Query: 994 RIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERH---QFLQ 1050
R+GQ+ V + RL++ +++EE IL AA KL +++ + ++K E+ + L
Sbjct: 763 RMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITS----NEKGEVHEQRCVVKLLT 818
Query: 1051 TILHQDDEEDEEEN 1064
T L D +++E+ N
Sbjct: 819 TALGLDKDQEEQLN 832
Score = 41 (19.5 bits), Expect = 6.0e-33, Sum P(2) = 6.0e-33
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 429 QKLMDTDGKVTLDQDETSQLTDMHIS-VREISSGKVLK 465
+ L GK DQDE SQ + I + I VL+
Sbjct: 481 KSLFAKKGKSDGDQDEVSQFQETQIQRAKRIMKPFVLR 518
>UNIPROTKB|F1NAD2 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0000729 "DNA double-strand
break processing" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0035861
"site of double-strand break" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0051304 "chromosome
separation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000018 GeneTree:ENSGT00630000089890
GO:GO:0051304 OMA:KNQRGIQ EMBL:AADN02016061 EMBL:AADN02016062
EMBL:AADN02016063 EMBL:AADN02016064 EMBL:AADN02016065
EMBL:AADN02016066 EMBL:AADN02016067 IPI:IPI00583150
Ensembl:ENSGALT00000016936 Uniprot:F1NAD2
Length = 963
Score = 519 (187.8 bits), Expect = 8.5e-79, Sum P(3) = 8.5e-79
Identities = 131/319 (41%), Positives = 180/319 (56%)
Query: 547 EQASILVNG-KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKV 605
EQ S+L +LK YQ GL W+ L + LNGILADEMGLGKTIQ IA + ++ ++
Sbjct: 422 EQPSVLNQSLELKPYQKIGLNWLALLHKHGLNGILADEMGLGKTIQAIAFLAHIYQEGD- 480
Query: 606 NGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYK-GSPHLRKTLQAQM--KASKFNVLLTT 662
GP LI+VP STL NW E W P +NV+ Y GS RK L+A + + FNV++TT
Sbjct: 481 RGPHLIVVPASTLDNWIREVNLWCPELNVLFYYVGSQEDRKHLRADISNRVVDFNVIVTT 540
Query: 663 YEYVIK---DKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQN 719
Y I D+ K+ Y I DEGH +KN L A HRLLLTGTP+QN
Sbjct: 541 YNCAISSSDDRSLFRKVKLNYAIFDEGHMLKNMSSVRYQQLMRIN-AKHRLLLTGTPVQN 599
Query: 720 KLPELWALLNFLLPSIFKS-VSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPF 778
L EL +LLNF++P +F S S + F++ A T E+ E+E I ++ +++PF
Sbjct: 600 NLLELMSLLNFVMPHMFSSSTSEIRRMFSSK-AKTAEEQSTYEKERIAHAKQ---IIKPF 655
Query: 779 LLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXL 838
+LRR+K EV QLP K ++I C MS Q+ LY + K G+E +
Sbjct: 656 ILRRVKDEVLKQLPPKKDHIELCAMSEKQEQLYCDLLNKLKKTMKGNEKNSD-------M 708
Query: 839 MNTIVQLRKLCNHPFMFQN 857
N ++QLRK+ NHP + ++
Sbjct: 709 GNAMMQLRKMANHPLLHRH 727
Score = 362 (132.5 bits), Expect = 8.5e-79, Sum P(3) = 8.5e-79
Identities = 69/158 (43%), Positives = 110/158 (69%)
Query: 881 SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL 940
SGKF +L+R+L LK G RV+LF Q T +++ILE + + +Y+RLDG T+ DR L
Sbjct: 790 SGKFRVLERLLSDLKEKGDRVVLFSQFTMVLDILEVFLKHWQHRYIRLDGKTQISDRIHL 849
Query: 941 LKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 1000
+ +FN D + F+F+LST+AGGLG+NL +A+ VI+ D D NP+ D QA+DR HR+GQ E
Sbjct: 850 IDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTRE 908
Query: 1001 VRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQ 1038
V+V++L++ ++EE +L + KL +++ + A + ++
Sbjct: 909 VKVIKLISKGTIEESMLKMNQQKLKLEQDMTAADLGEE 946
Score = 42 (19.8 bits), Expect = 8.5e-79, Sum P(3) = 8.5e-79
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 185 QSKLTNIPKPEGLDPLII------LQERENRVALNIERRIEELNGSLT 226
++ L+ I K GL I+ L+ER+ V L + + EE++ LT
Sbjct: 360 EALLSKITKTAGLSEDIVWNCKTLLKERD--VVLKLMNKCEEISNKLT 405
Score = 37 (18.1 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 746 FNAPFATTGEKVELNEEETILIIRRL 771
++ P A G K E+ E +++ +L
Sbjct: 168 YHGPEALDGSKSEIQWERQEMLVEKL 193
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 807 (289.1 bits), Expect = 1.2e-78, Sum P(2) = 1.2e-78
Identities = 207/596 (34%), Positives = 314/596 (52%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKTIQTI + L ++ GPFL+ P
Sbjct: 732 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 791
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPLA 674
LST+ NW EF+ WAP VV Y G R ++ + + N + + +
Sbjct: 792 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 851
Query: 675 KLH-----WKYMIIDEGHRMK-NHHCKLT---HILNTFYVAPHRLLLTGTPLQNKLPELW 725
K H ++ + ID+ C + H L R+L G + +KL
Sbjct: 852 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVL-NGYKIDHKLLLTG 910
Query: 726 ALLNFLLPSIFKSVSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 784
L L +F ++ + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 911 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLK 967
Query: 785 KEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQ 844
+V +P K E I++ ++S +QK Y+++ T+ L+N ++
Sbjct: 968 ADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNF-----EALNSRGGGNQVSLLNIMMD 1022
Query: 845 LRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLF 904
L+K CNHP++F + S + SG G L + SGK LL ++L KLK GHRVL+F
Sbjct: 1023 LKKCCNHPYLFP-VAAMESPKLP-SGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIF 1080
Query: 905 CQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLG 964
QMT+++++LED+ Y G+KY R+DG R + + +FNAP ++ F F+LSTRAGGLG
Sbjct: 1081 SQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1140
Query: 965 LNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKL 1024
+NL TADTVIIFDSDWNPH D+QA RAHRIGQ N+V + R +T SVEERI A+ K+
Sbjct: 1141 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1200
Query: 1025 NMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE-----DEEENAVPDDETV---NQML 1076
+ V++ G+ + GS Q L IL EE +E EN D + N+ +
Sbjct: 1201 MLTHLVVRPGLGSK--AGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIHYDNEAI 1258
Query: 1077 ARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEA-KEEE 1131
AR + Q DA + + + ++ ++++E+++IE+ E K+EE
Sbjct: 1259 ARLLDRNQ-----DATEDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEE 1309
Score = 54 (24.1 bits), Expect = 1.2e-78, Sum P(2) = 1.2e-78
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 254 RAEVIACARRDTTLETAVNVK-AYKRTKRQGLK-EARATEKLEKQQKVEAERKKRQKHQE 311
RA + C D L+ A K + +++G++ EA+ E+ ++ + E E+++ H E
Sbjct: 398 RAYHLVCL--DPELDRAPEGKWSCPHCEKEGVQWEAKEEEEEYEEGEEEGEKEEEDDHME 455
Query: 312 YITTVLQHCKD 322
Y CKD
Sbjct: 456 YCRV----CKD 462
Score = 41 (19.5 bits), Expect = 2.9e-77, Sum P(2) = 2.9e-77
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 267 LETAVNVKAYKR-TKRQGLKEA---RATEKLEKQQKVEAERKK-RQKHQ 310
L +A+ VK KR K+Q + R +KL+ +++ +ER + R+K +
Sbjct: 40 LPSALGVKKRKRGPKKQKENKPGKPRKRKKLDSEEEFGSERDEYREKSE 88
Score = 38 (18.4 bits), Expect = 6.0e-77, Sum P(2) = 6.0e-77
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 283 GLKEARATEKLEKQQKVEAERKKRQKHQE 311
G+K+ + K +K+ K RK+++ E
Sbjct: 45 GVKKRKRGPKKQKENKPGKPRKRKKLDSE 73
Score = 38 (18.4 bits), Expect = 6.0e-77, Sum P(2) = 6.0e-77
Identities = 9/38 (23%), Positives = 21/38 (55%)
Query: 280 KRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVL 317
KR+ + +K ++++K E + ++Q Q+ T+L
Sbjct: 101 KRRRKHREKKEKKTKRRKKGEGDGGQKQVEQKSSATLL 138
Score = 37 (18.1 bits), Expect = 7.7e-77, Sum P(2) = 7.7e-77
Identities = 6/9 (66%), Positives = 9/9 (100%)
Query: 303 RKKRQKHQE 311
RK+R+KH+E
Sbjct: 100 RKRRRKHRE 108
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 805 (288.4 bits), Expect = 2.5e-78, Sum P(2) = 2.5e-78
Identities = 207/596 (34%), Positives = 314/596 (52%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKTIQTI + L ++ GPFL+ P
Sbjct: 734 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 793
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPLA 674
LST+ NW EF+ WAP VV Y G R ++ + + N + + +
Sbjct: 794 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 853
Query: 675 KLH-----WKYMIIDEGHRMK-NHHCKLT---HILNTFYVAPHRLLLTGTPLQNKLPELW 725
K H ++ + ID+ C + H L R+L G + +KL
Sbjct: 854 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVL-NGYKIDHKLLLTG 912
Query: 726 ALLNFLLPSIFKSVSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 784
L L +F ++ + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 913 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLK 969
Query: 785 KEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQ 844
+V +P K E I++ ++S +QK Y+++ T+ L+N ++
Sbjct: 970 ADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNF-----EALNSRGGGNQVSLLNIMMD 1024
Query: 845 LRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLF 904
L+K CNHP++F + S + SG G L + SGK LL ++L KLK GHRVL+F
Sbjct: 1025 LKKCCNHPYLFP-VAAMESPKLP-SGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIF 1082
Query: 905 CQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLG 964
QMT+++++LED+ Y G+KY R+DG R + + +FNAP ++ F F+LSTRAGGLG
Sbjct: 1083 SQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1142
Query: 965 LNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKL 1024
+NL TADTVIIFDSDWNPH D+QA RAHRIGQ N+V + R +T SVEERI A+ K+
Sbjct: 1143 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1202
Query: 1025 NMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE-----DEEENAVPDDETV---NQML 1076
+ V++ G+ + GS Q L IL EE +E EN D + N+ +
Sbjct: 1203 MLTHLVVRPGLGSK--AGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIHYDNEAI 1260
Query: 1077 ARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEA-KEEE 1131
AR + Q DA + + + ++ ++++E+++IE+ E K+EE
Sbjct: 1261 ARLLDRNQ-----DATEDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEE 1311
Score = 54 (24.1 bits), Expect = 2.5e-78, Sum P(2) = 2.5e-78
Identities = 20/72 (27%), Positives = 36/72 (50%)
Query: 254 RAEVIACARRDTTLETAVNVK-AYKRTKRQGLK-EARATEK-LEKQQKVEAERKKRQKHQ 310
RA + C D L+ A K + +++G++ EA+ E+ E++ + E E+++ H
Sbjct: 399 RAYHLVCL--DPELDRAPEGKWSCPHCEKEGVQWEAKEEEEEYEEEGEEEGEKEEEDDHM 456
Query: 311 EYITTVLQHCKD 322
EY CKD
Sbjct: 457 EYCRV----CKD 464
Score = 44 (20.5 bits), Expect = 2.8e-77, Sum P(2) = 2.8e-77
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 274 KAYKRTKRQGLKE--ARATEKLEKQQKVEAE------RKKRQKHQE 311
K KR KR +E + E EK + +E RK+R+KH+E
Sbjct: 64 KPRKRKKRDSEEEFGSERDEYREKSESGGSEYGTGPGRKRRRKHRE 109
Score = 43 (20.2 bits), Expect = 3.6e-77, Sum P(2) = 3.6e-77
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 283 GLKEARATEKLEKQQKV--EAERKKRQKHQEY 312
G+K+ + K +K+ K +RKKR +E+
Sbjct: 46 GVKKRKRGPKKQKENKPGKPRKRKKRDSEEEF 77
Score = 38 (18.4 bits), Expect = 1.2e-76, Sum P(2) = 1.2e-76
Identities = 9/38 (23%), Positives = 21/38 (55%)
Query: 280 KRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVL 317
KR+ + +K ++++K E + ++Q Q+ T+L
Sbjct: 102 KRRRKHREKKEKKTKRRKKGEGDGGQKQVEQKSSATLL 139
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 805 (288.4 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 207/596 (34%), Positives = 314/596 (52%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKTIQTI + L ++ GPFL+ P
Sbjct: 793 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 852
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPLA 674
LST+ NW EF+ WAP VV Y G R ++ + + N + + +
Sbjct: 853 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 912
Query: 675 KLH-----WKYMIIDEGHRMK-NHHCKLT---HILNTFYVAPHRLLLTGTPLQNKLPELW 725
K H ++ + ID+ C + H L R+L G + +KL
Sbjct: 913 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVL-NGYKIDHKLLLTG 971
Query: 726 ALLNFLLPSIFKSVSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 784
L L +F ++ + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 972 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLK 1028
Query: 785 KEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQ 844
+V +P K E I++ ++S +QK Y+++ T+ L+N ++
Sbjct: 1029 ADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNF-----EALNSRGGGNQVSLLNIMMD 1083
Query: 845 LRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLF 904
L+K CNHP++F + S + SG G L + SGK LL ++L KLK GHRVL+F
Sbjct: 1084 LKKCCNHPYLFP-VAAMESPKLP-SGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIF 1141
Query: 905 CQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLG 964
QMT+++++LED+ Y G+KY R+DG R + + +FNAP ++ F F+LSTRAGGLG
Sbjct: 1142 SQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1201
Query: 965 LNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKL 1024
+NL TADTVIIFDSDWNPH D+QA RAHRIGQ N+V + R +T SVEERI A+ K+
Sbjct: 1202 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1261
Query: 1025 NMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE-----DEEENAVPDDETV---NQML 1076
+ V++ G+ + GS Q L IL EE +E EN D + N+ +
Sbjct: 1262 MLTHLVVRPGLGSK--AGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIHYDNEAI 1319
Query: 1077 ARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEA-KEEE 1131
AR + Q DA + + + ++ ++++E+++IE+ E K+EE
Sbjct: 1320 ARLLDRNQ-----DATEDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEE 1370
Score = 54 (24.1 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 20/72 (27%), Positives = 36/72 (50%)
Query: 254 RAEVIACARRDTTLETAVNVK-AYKRTKRQGLK-EARATEK-LEKQQKVEAERKKRQKHQ 310
RA + C D L+ A K + +++G++ EA+ E+ E++ + E E+++ H
Sbjct: 458 RAYHLVCL--DPELDRAPEGKWSCPHCEKEGVQWEAKEEEEEYEEEGEEEGEKEEEDDHM 515
Query: 311 EYITTVLQHCKD 322
EY CKD
Sbjct: 516 EYCRV----CKD 523
Score = 44 (20.5 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 274 KAYKRTKRQGLKE--ARATEKLEKQQKVEAE------RKKRQKHQE 311
K KR KR +E + E EK + +E RK+R+KH+E
Sbjct: 123 KPRKRKKRDSEEEFGSERDEYREKSESGGSEYGTGPGRKRRRKHRE 168
Score = 43 (20.2 bits), Expect = 4.0e-77, Sum P(2) = 4.0e-77
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 283 GLKEARATEKLEKQQKV--EAERKKRQKHQEY 312
G+K+ + K +K+ K +RKKR +E+
Sbjct: 105 GVKKRKRGPKKQKENKPGKPRKRKKRDSEEEF 136
Score = 38 (18.4 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
Identities = 9/38 (23%), Positives = 21/38 (55%)
Query: 280 KRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVL 317
KR+ + +K ++++K E + ++Q Q+ T+L
Sbjct: 161 KRRRKHREKKEKKTKRRKKGEGDGGQKQVEQKSSATLL 198
>ZFIN|ZDB-GENE-050522-499 [details] [associations]
symbol:smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-499 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000729 HOGENOM:HOG000172362
GO:GO:0035861 GeneTree:ENSGT00630000089890 OMA:KEERYMA
HOVERGEN:HBG055804 EMBL:AL807792 IPI:IPI00492619 UniGene:Dr.3950
ProteinModelPortal:B0R061 Ensembl:ENSDART00000091409
ArrayExpress:B0R061 Bgee:B0R061 Uniprot:B0R061
Length = 972
Score = 533 (192.7 bits), Expect = 4.0e-78, Sum P(2) = 4.0e-78
Identities = 131/315 (41%), Positives = 183/315 (58%)
Query: 547 EQASIL-VNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKV 605
+Q +L N KL+ YQ+ GL+W++ L + L+GILADEMGLGKTIQ IA + +L EK +
Sbjct: 437 KQPKVLNSNLKLQAYQLIGLKWLILLHQHKLSGILADEMGLGKTIQAIAFLAHLYEKG-I 495
Query: 606 NGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKAS--KFNVLLTTY 663
GP LI VP STL NW E W PS+ V+ Y GS RK L+ + FN++++TY
Sbjct: 496 KGPHLITVPSSTLDNWVRELGLWCPSLKVLIYYGSVEDRKYLRQDILTGLIDFNIIVSTY 555
Query: 664 EYVI---KDKGPLAKLHWKYMIIDEGHRMKN-HHCKLTHILNTFYVAPHRLLLTGTPLQN 719
I D+ KL KY + DEGH +KN + + H++ A HRLLLTGTPLQN
Sbjct: 556 NLTIGNDHDRSLFRKLKLKYAVFDEGHMLKNMNSLRYRHLMTIN--AEHRLLLTGTPLQN 613
Query: 720 KLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFL 779
L EL +LLNF++PS+F S ST + + F+T + E + + + RL +++PF+
Sbjct: 614 NLLELMSLLNFIMPSMFSS-STSQ--ISKMFSTRSSEEESSFHKDRIAQARL--IMKPFI 668
Query: 780 LRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLM 839
LRR+K EV +LP K+E I C MS Q LY + K + T + L
Sbjct: 669 LRRVKSEVLKELPPKMEKIEMCPMSDAQHKLYDILF-KRLKKTPNGDKRE--------LC 719
Query: 840 NTIVQLRKLCNHPFM 854
N ++QLRK+ NHP +
Sbjct: 720 NVMMQLRKMANHPLL 734
Score = 337 (123.7 bits), Expect = 4.0e-78, Sum P(2) = 4.0e-78
Identities = 67/148 (45%), Positives = 102/148 (68%)
Query: 881 SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL 940
SGKF LL + L KLK G RV+LF Q T +++I+E + +Y+RLDG+T +R L
Sbjct: 800 SGKFALLTKTLAKLKEKGDRVVLFSQFTMMLDIVEILLKHLDHQYVRLDGSTPMAERIGL 859
Query: 941 LKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 1000
+ K+N + E F+F+LSTRAGG G+NL +A+TVI+ D D NP D QA+DR HR+GQ
Sbjct: 860 IDKYNT-NPEIFVFLLSTRAGGQGINLASANTVILHDIDCNPFNDKQAEDRCHRMGQTRT 918
Query: 1001 VRVLRLMTVNSVEERILAAARYKLNMDE 1028
V+V++L++ +S+E+ +L + KL +++
Sbjct: 919 VQVIKLISKDSIEDCMLRVGQEKLKLEQ 946
Score = 46 (21.3 bits), Expect = 1.7e-47, Sum P(2) = 1.7e-47
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 1251 KELP--DYYEVIDRPMDIKKILGR-IEDGKYSSVDELQKDFKTLCRNAQIYNEELSLIHE 1307
K+ P D E+ + M ++K+ + +Y + D+L K + + Y+ + +LI E
Sbjct: 708 KKTPNGDKRELCNVMMQLRKMANHPLLHRQYYTSDKLAAMSKAMLKEPTHYDADPALIQE 767
Query: 1308 DSVVL 1312
D V+
Sbjct: 768 DMEVM 772
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 807 (289.1 bits), Expect = 4.2e-78, Sum P(2) = 4.2e-78
Identities = 207/596 (34%), Positives = 314/596 (52%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKTIQTI + L ++ GPFL+ P
Sbjct: 734 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 793
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPLA 674
LST+ NW EF+ WAP VV Y G R ++ + + N + + +
Sbjct: 794 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 853
Query: 675 KLH-----WKYMIIDEGHRMK-NHHCKLT---HILNTFYVAPHRLLLTGTPLQNKLPELW 725
K H ++ + ID+ C + H L R+L G + +KL
Sbjct: 854 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVL-NGYKIDHKLLLTG 912
Query: 726 ALLNFLLPSIFKSVSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 784
L L +F ++ + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 913 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLK 969
Query: 785 KEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQ 844
+V +P K E I++ ++S +QK Y+++ T+ L+N ++
Sbjct: 970 ADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNF-----EALNSRGGGNQVSLLNIMMD 1024
Query: 845 LRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLF 904
L+K CNHP++F + S + SG G L + SGK LL ++L KLK GHRVL+F
Sbjct: 1025 LKKCCNHPYLFP-VAAMESPKLP-SGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIF 1082
Query: 905 CQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLG 964
QMT+++++LED+ Y G+KY R+DG R + + +FNAP ++ F F+LSTRAGGLG
Sbjct: 1083 SQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1142
Query: 965 LNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKL 1024
+NL TADTVIIFDSDWNPH D+QA RAHRIGQ N+V + R +T SVEERI A+ K+
Sbjct: 1143 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1202
Query: 1025 NMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE-----DEEENAVPDDETV---NQML 1076
+ V++ G+ + GS Q L IL EE +E EN D + N+ +
Sbjct: 1203 MLTHLVVRPGLGSK--AGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIHYDNEAI 1260
Query: 1077 ARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEA-KEEE 1131
AR + Q DA + + + ++ ++++E+++IE+ E K+EE
Sbjct: 1261 ARLLDRNQ-----DATEDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEE 1311
Score = 49 (22.3 bits), Expect = 4.2e-78, Sum P(2) = 4.2e-78
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 254 RAEVIACARRDTTLETAVNVK-AYKRTKRQGLK-EARATEK-LEKQQKVEAERKKRQKHQ 310
RA + C D L+ A K + +++G++ EA+ + E++ + E E+++ H
Sbjct: 399 RAYHLVCL--DPELDRAPEGKWSCPHCEKEGVQWEAKEEDDDYEEEGEEEGEKEEEDDHM 456
Query: 311 EYITTVLQHCKD 322
EY CKD
Sbjct: 457 EYCRV----CKD 464
Score = 41 (19.5 bits), Expect = 2.9e-77, Sum P(2) = 2.9e-77
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 267 LETAVNVKAYKR-TKRQGLKEA---RATEKLEKQQKVEAERKK-RQKHQ 310
L +A+ VK KR K+Q + R +KL+ +++ +ER + R+K +
Sbjct: 41 LPSALGVKKRKRGPKKQKENKPGKPRKRKKLDSEEEFGSERDEYREKSE 89
Score = 38 (18.4 bits), Expect = 6.1e-77, Sum P(2) = 6.1e-77
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 283 GLKEARATEKLEKQQKVEAERKKRQKHQE 311
G+K+ + K +K+ K RK+++ E
Sbjct: 46 GVKKRKRGPKKQKENKPGKPRKRKKLDSE 74
Score = 38 (18.4 bits), Expect = 6.1e-77, Sum P(2) = 6.1e-77
Identities = 9/38 (23%), Positives = 21/38 (55%)
Query: 280 KRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVL 317
KR+ + +K ++++K E + ++Q Q+ T+L
Sbjct: 102 KRRRKHREKKEKKTKRRKKGEGDGGQKQVEQKSSATLL 139
Score = 37 (18.1 bits), Expect = 7.8e-77, Sum P(2) = 7.8e-77
Identities = 6/9 (66%), Positives = 9/9 (100%)
Query: 303 RKKRQKHQE 311
RK+R+KH+E
Sbjct: 101 RKRRRKHRE 109
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 802 (287.4 bits), Expect = 6.0e-78, Sum P(2) = 6.0e-78
Identities = 207/596 (34%), Positives = 314/596 (52%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKTIQTI + L ++ GPFL+ P
Sbjct: 690 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 749
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPLA 674
LST+ NW EF+ WAP VV Y G R ++ + + N + + +
Sbjct: 750 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 809
Query: 675 KLH-----WKYMIIDEGHRMK-NHHCKLT---HILNTFYVAPHRLLLTGTPLQNKLPELW 725
K H ++ + ID+ C + H L R+L G + +KL
Sbjct: 810 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVL-NGYKIDHKLLLTG 868
Query: 726 ALLNFLLPSIFKSVSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 784
L L +F ++ + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 869 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLK 925
Query: 785 KEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQ 844
+V +P K E I++ ++S +QK Y+++ T+ L+N ++
Sbjct: 926 ADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNF-----EALNSRGGGNQVSLLNIMMD 980
Query: 845 LRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLF 904
L+K CNHP++F + S + SG G L + SGK LL ++L KLK GHRVL+F
Sbjct: 981 LKKCCNHPYLFP-VAAMESPKLP-SGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIF 1038
Query: 905 CQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLG 964
QMT+++++LED+ Y G+KY R+DG R + + +FNAP ++ F F+LSTRAGGLG
Sbjct: 1039 SQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1098
Query: 965 LNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKL 1024
+NL TADTVIIFDSDWNPH D+QA RAHRIGQ N+V + R +T SVEERI A+ K+
Sbjct: 1099 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1158
Query: 1025 NMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE-----DEEENAVPDDETV---NQML 1076
+ V++ G+ + GS Q L IL EE +E EN D + N+ +
Sbjct: 1159 MLTHLVVRPGLGSK--AGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIHYDNEAI 1216
Query: 1077 ARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEA-KEEE 1131
AR + Q DA + + + ++ ++++E+++IE+ E K+EE
Sbjct: 1217 ARLLDRNQ-----DATDDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEE 1267
Score = 54 (24.1 bits), Expect = 6.0e-78, Sum P(2) = 6.0e-78
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 254 RAEVIACARRDTTLETAVNVK-AYKRTKRQGLK-EARATEKLEKQQKVEAERKKRQKHQE 311
RA + C D L+ A K + +++G++ EA+ E+ +++ E E+++ H E
Sbjct: 356 RAYHLVCL--DPELDRAPEGKWSCPHCEKEGVQWEAKEEEEDYEEEGEEGEKEEEDDHME 413
Query: 312 YITTVLQHCKD 322
Y CKD
Sbjct: 414 YCRV----CKD 420
Score = 38 (18.4 bits), Expect = 2.9e-76, Sum P(2) = 2.9e-76
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 283 GLKEARATEKLEKQQKVEAERKKRQKHQE 311
G+K+ + K +K+ K RK+++ E
Sbjct: 2 GVKKRKRGPKKQKENKPGKPRKRKKLDSE 30
Score = 37 (18.1 bits), Expect = 3.7e-76, Sum P(2) = 3.7e-76
Identities = 6/9 (66%), Positives = 9/9 (100%)
Query: 303 RKKRQKHQE 311
RK+R+KH+E
Sbjct: 57 RKRRRKHRE 65
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 802 (287.4 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
Identities = 207/596 (34%), Positives = 314/596 (52%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKTIQTI + L ++ GPFL+ P
Sbjct: 785 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 844
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPLA 674
LST+ NW EF+ WAP VV Y G R ++ + + N + + +
Sbjct: 845 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 904
Query: 675 KLH-----WKYMIIDEGHRMK-NHHCKLT---HILNTFYVAPHRLLLTGTPLQNKLPELW 725
K H ++ + ID+ C + H L R+L G + +KL
Sbjct: 905 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVL-NGYKIDHKLLLTG 963
Query: 726 ALLNFLLPSIFKSVSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 784
L L +F ++ + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 964 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLK 1020
Query: 785 KEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQ 844
+V +P K E I++ ++S +QK Y+++ T+ L+N ++
Sbjct: 1021 ADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNF-----EALNSRGGGNQVSLLNIMMD 1075
Query: 845 LRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLF 904
L+K CNHP++F + S + SG G L + SGK LL ++L KLK GHRVL+F
Sbjct: 1076 LKKCCNHPYLFP-VAAMESPKLP-SGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIF 1133
Query: 905 CQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLG 964
QMT+++++LED+ Y G+KY R+DG R + + +FNAP ++ F F+LSTRAGGLG
Sbjct: 1134 SQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1193
Query: 965 LNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKL 1024
+NL TADTVIIFDSDWNPH D+QA RAHRIGQ N+V + R +T SVEERI A+ K+
Sbjct: 1194 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1253
Query: 1025 NMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE-----DEEENAVPDDETV---NQML 1076
+ V++ G+ + GS Q L IL EE +E EN D + N+ +
Sbjct: 1254 MLTHLVVRPGLGSK--AGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIHYDNEAI 1311
Query: 1077 ARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEA-KEEE 1131
AR + Q DA + + + ++ ++++E+++IE+ E K+EE
Sbjct: 1312 ARLLDRNQ-----DATDDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEE 1362
Score = 54 (24.1 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 254 RAEVIACARRDTTLETAVNVK-AYKRTKRQGLK-EARATEKLEKQQKVEAERKKRQKHQE 311
RA + C D L+ A K + +++G++ EA+ E+ +++ E E+++ H E
Sbjct: 451 RAYHLVCL--DPELDRAPEGKWSCPHCEKEGVQWEAKEEEEDYEEEGEEGEKEEEDDHME 508
Query: 312 YITTVLQHCKD 322
Y CKD
Sbjct: 509 YCRV----CKD 515
Score = 41 (19.5 bits), Expect = 1.8e-76, Sum P(2) = 1.8e-76
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 267 LETAVNVKAYKR-TKRQGLKEA---RATEKLEKQQKVEAERKK-RQKHQ 310
L +A+ VK KR K+Q + R +KL+ +++ +ER + R+K +
Sbjct: 92 LPSALGVKKRKRGPKKQKENKPGKPRKRKKLDSEEEFGSERDEYREKSE 140
Score = 38 (18.4 bits), Expect = 3.6e-76, Sum P(2) = 3.6e-76
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 283 GLKEARATEKLEKQQKVEAERKKRQKHQE 311
G+K+ + K +K+ K RK+++ E
Sbjct: 97 GVKKRKRGPKKQKENKPGKPRKRKKLDSE 125
Score = 37 (18.1 bits), Expect = 4.6e-76, Sum P(2) = 4.6e-76
Identities = 6/9 (66%), Positives = 9/9 (100%)
Query: 303 RKKRQKHQE 311
RK+R+KH+E
Sbjct: 152 RKRRRKHRE 160
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 802 (287.4 bits), Expect = 8.0e-78, Sum P(2) = 8.0e-78
Identities = 207/596 (34%), Positives = 314/596 (52%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKTIQTI + L ++ GPFL+ P
Sbjct: 785 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 844
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPLA 674
LST+ NW EF+ WAP VV Y G R ++ + + N + + +
Sbjct: 845 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 904
Query: 675 KLH-----WKYMIIDEGHRMK-NHHCKLT---HILNTFYVAPHRLLLTGTPLQNKLPELW 725
K H ++ + ID+ C + H L R+L G + +KL
Sbjct: 905 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVL-NGYKIDHKLLLTG 963
Query: 726 ALLNFLLPSIFKSVSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 784
L L +F ++ + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 964 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLK 1020
Query: 785 KEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQ 844
+V +P K E I++ ++S +QK Y+++ T+ L+N ++
Sbjct: 1021 ADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNF-----EALNSRGGGNQVSLLNIMMD 1075
Query: 845 LRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLF 904
L+K CNHP++F + S + SG G L + SGK LL ++L KLK GHRVL+F
Sbjct: 1076 LKKCCNHPYLFP-VAAMESPKLP-SGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIF 1133
Query: 905 CQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLG 964
QMT+++++LED+ Y G+KY R+DG R + + +FNAP ++ F F+LSTRAGGLG
Sbjct: 1134 SQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1193
Query: 965 LNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKL 1024
+NL TADTVIIFDSDWNPH D+QA RAHRIGQ N+V + R +T SVEERI A+ K+
Sbjct: 1194 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1253
Query: 1025 NMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE-----DEEENAVPDDETV---NQML 1076
+ V++ G+ + GS Q L IL EE +E EN D + N+ +
Sbjct: 1254 MLTHLVVRPGLGSK--AGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIHYDNEAI 1311
Query: 1077 ARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEA-KEEE 1131
AR + Q DA + + + ++ ++++E+++IE+ E K+EE
Sbjct: 1312 ARLLDRNQ-----DATDDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEE 1362
Score = 54 (24.1 bits), Expect = 8.0e-78, Sum P(2) = 8.0e-78
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 254 RAEVIACARRDTTLETAVNVK-AYKRTKRQGLK-EARATEKLEKQQKVEAERKKRQKHQE 311
RA + C D L+ A K + +++G++ EA+ E+ +++ E E+++ H E
Sbjct: 451 RAYHLVCL--DPELDRAPEGKWSCPHCEKEGVQWEAKEEEEDYEEEGEEGEKEEEDDHME 508
Query: 312 YITTVLQHCKD 322
Y CKD
Sbjct: 509 YCRV----CKD 515
Score = 41 (19.5 bits), Expect = 1.9e-76, Sum P(2) = 1.9e-76
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 267 LETAVNVKAYKR-TKRQGLKEA---RATEKLEKQQKVEAERKK-RQKHQ 310
L +A+ VK KR K+Q + R +KL+ +++ +ER + R+K +
Sbjct: 92 LPSALGVKKRKRGPKKQKENKPGKPRKRKKLDSEEEFGSERDEYREKSE 140
Score = 38 (18.4 bits), Expect = 3.9e-76, Sum P(2) = 3.9e-76
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 283 GLKEARATEKLEKQQKVEAERKKRQKHQE 311
G+K+ + K +K+ K RK+++ E
Sbjct: 97 GVKKRKRGPKKQKENKPGKPRKRKKLDSE 125
Score = 37 (18.1 bits), Expect = 5.0e-76, Sum P(2) = 5.0e-76
Identities = 6/9 (66%), Positives = 9/9 (100%)
Query: 303 RKKRQKHQE 311
RK+R+KH+E
Sbjct: 152 RKRRRKHRE 160
>CGD|CAL0001763 [details] [associations]
symbol:orf19.1871 species:5476 "Candida albicans" [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
CGD:CAL0001763 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0016568 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
EMBL:AACQ01000133 EMBL:AACQ01000132 RefSeq:XP_713128.1
RefSeq:XP_713174.1 ProteinModelPortal:Q59U81 STRING:Q59U81
PRIDE:Q59U81 GeneID:3645174 GeneID:3645220 KEGG:cal:CaO19.1871
KEGG:cal:CaO19.9427 KO:K11681 Uniprot:Q59U81
Length = 1641
Score = 474 (171.9 bits), Expect = 1.3e-77, Sum P(4) = 1.3e-77
Identities = 100/224 (44%), Positives = 134/224 (59%)
Query: 552 LVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLI 611
L+ G L+ YQ +GL W+ SL+NNN NGILADEMGLGKTIQTI+L+ YL + GP LI
Sbjct: 818 LLRGTLRPYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTISLLAYLACEHHKWGPHLI 877
Query: 612 IVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLR-KTLQAQMKASKFNVLLTTYEYVIKDK 670
IVP S + NW +EF+++AP V+ Y GSP R + + K F+V +T+Y+ V++D+
Sbjct: 878 IVPTSVMLNWEMEFKKFAPGFKVLTYYGSPQQRAQKRKGWNKPDAFHVCITSYQLVVQDQ 937
Query: 671 GPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLNF 730
+ W YMI+DE H +KN L F +RLLLTGTPLQN L ELW+LL F
Sbjct: 938 QSFKRRRWTYMILDEAHNIKNFRSTRWRALLNFNTE-NRLLLTGTPLQNNLMELWSLLYF 996
Query: 731 LLPSI---------FKSVSTFEQWFNAPFATTGEKVELNEEETI 765
L+PS F ++ F+QWF P E+ + I
Sbjct: 997 LMPSSKVNQAMPEGFANLDDFQQWFGKPVNRILEQTSAGNSDLI 1040
Score = 413 (150.4 bits), Expect = 1.3e-77, Sum P(4) = 1.3e-77
Identities = 104/271 (38%), Positives = 144/271 (53%)
Query: 882 GKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLL 941
GK + L +L +L S GHR L+F QMT++++ILE + + G++YMRLDG TK EDR L
Sbjct: 1366 GKLQKLATLLQELTSQGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDGATKIEDRQLLT 1425
Query: 942 KKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 1001
+KFN D + +F+LSTR+GGLG+NL ADTVI +DSDWNP D Q QDR HRIGQ +V
Sbjct: 1426 EKFNR-DPKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQVRDV 1484
Query: 1002 RVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDE 1061
+ R ++ ++E I+ A K +D VIQ G F G + L + + E +
Sbjct: 1485 HIYRFVSEYTIESNIIKKANQKRQLDNVVIQEGEFTTDYFGKFSVRDLVSDSNIGKEITD 1544
Query: 1062 EENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIE 1121
D + +LA++E+E E R G + L EV+ D +E
Sbjct: 1545 RTIDFSGDAKMGNVLAQAEDE---------EDRVAAG--AALKEVAIDDDDFKEETRSAT 1593
Query: 1122 QWAFEAKEEEKALHMGRGSRQRKQVDYTDSL 1152
A A E AL G VDY D +
Sbjct: 1594 TGATPAPTETNALSTTDGDAAFIDVDYEDGI 1624
Score = 208 (78.3 bits), Expect = 7.1e-50, Sum P(3) = 7.1e-50
Identities = 50/144 (34%), Positives = 76/144 (52%)
Query: 728 LNFLLPSIFKSVSTFEQWFNAPF--------ATTGEKVELNE-------EETILIIRRLH 772
+N +P F ++ F+QWF P A + ++ NE EET + RLH
Sbjct: 1003 VNQAMPEGFANLDDFQQWFGKPVNRILEQTSAGNSDLIDENERTTQKMDEETRNTVARLH 1062
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXX 832
+VLRP+LLRRLKK+VE Q+P K E+I+ C +S Q+ LY ++
Sbjct: 1063 QVLRPYLLRRLKKDVEKQMPGKYEHIVYCRLSKRQRFLYDDFMSRA------KTKETLAS 1116
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQ 856
++N ++QLRK+CNHP +F+
Sbjct: 1117 GNFLSIINCLMQLRKVCNHPDLFE 1140
Score = 47 (21.6 bits), Expect = 1.3e-77, Sum P(4) = 1.3e-77
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 268 ETAVNVKAYKRTKRQGLKEA--RATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKE 325
E N+K R Q +K+ +A + + Q + E K+ K +++++ +L+H E
Sbjct: 478 EREQNLKKMSRLTMQAVKKRWNQAQKVYQIIQNEKEEELKKIKGRQHLSEMLEHSTQLLE 537
Score = 44 (20.5 bits), Expect = 1.3e-77, Sum P(4) = 1.3e-77
Identities = 5/19 (26%), Positives = 17/19 (89%)
Query: 781 RRLKKEVESQLPDKVEYII 799
+RL++E ++++ +K+E+++
Sbjct: 1234 QRLRREEQAEIKEKLEHVV 1252
Score = 39 (18.8 bits), Expect = 6.3e-39, Sum P(3) = 6.3e-39
Identities = 13/55 (23%), Positives = 28/55 (50%)
Query: 1009 VNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEE 1063
VN + E+ A ++ +E+ Q + ++T + HQ L+ L + ++D E+
Sbjct: 1025 VNRILEQTSAGNSDLIDENERTTQKMDEETRNTVARLHQVLRPYLLRRLKKDVEK 1079
Score = 37 (18.1 bits), Expect = 1.5e-76, Sum P(4) = 1.5e-76
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 61 IDSMKEQGLEEDPRYQKLIEMKANRTEIKHA-FTSAQ 96
I + KE+ L++ Q L EM + T++ A TS++
Sbjct: 508 IQNEKEEELKKIKGRQHLSEMLEHSTQLLEAQLTSSR 544
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 621 (223.7 bits), Expect = 1.5e-77, Sum P(5) = 1.5e-77
Identities = 140/358 (39%), Positives = 211/358 (58%)
Query: 746 FNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSG 805
FN + T E E+++E+ I +LH +L P +LRRLK +V + +P K E I++ ++S
Sbjct: 814 FNQLESFTAEFSEISKEDQI---EKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSA 870
Query: 806 LQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDH 865
+QK Y K IL + L+N I++L+K CNHP++F ++
Sbjct: 871 MQKKYY-----KNILTRNFDALNVKNGGTQMSLINIIMELKKCCNHPYLF--MKACLEAP 923
Query: 866 VGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKY 925
+G+ G L + +GKF LL ++L KLK GHRVL+F QMT +++ILED+ G+KY
Sbjct: 924 KLKNGMYEGSALIKNAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKY 983
Query: 926 MRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQD 985
R+DG+ + R D + ++NAP ++ F+F+LSTRAGGLG+NL TADTVII+DSDWNPH D
Sbjct: 984 ERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHND 1043
Query: 986 LQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSER 1045
+QA RAHR+GQK++V + R +T SVEERI + A+ K+ + V++AG+ + +
Sbjct: 1044 IQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLTHLVVRAGLGAKDGKSMSK 1103
Query: 1046 HQFLQTILHQDDEE--DEEENAVP--DDETVNQMLARSEEEFQTYQRID--AERRKEQ 1097
+ L +L EE EEE V D E + +E +D +R KE+
Sbjct: 1104 TE-LDDVLRWGTEELFKEEEAPVEGADGEGTSSKKPNEQEIVWDDAAVDFLLDRNKEE 1160
Score = 298 (110.0 bits), Expect = 2.6e-41, Sum P(5) = 2.6e-41
Identities = 68/182 (37%), Positives = 108/182 (59%)
Query: 636 AYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCK 695
A +G P + K ++ KF+VLLT+YE + DK L+ + W +++DE HR+KN+
Sbjct: 717 AVRGGPKVSKI--KTLENLKFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQST 774
Query: 696 LTHILNTFYVAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGE 755
L + + +R+LLTGTPLQN L EL+ LLNFL P F + +F T E
Sbjct: 775 FFKNLREYNIQ-YRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESF----------TAE 823
Query: 756 KVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMH 815
E+++E+ I +LH +L P +LRRLK +V + +P K E I++ ++S +QK Y+++
Sbjct: 824 FSEISKEDQI---EKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNIL 880
Query: 816 TK 817
T+
Sbjct: 881 TR 882
Score = 222 (83.2 bits), Expect = 1.5e-77, Sum P(5) = 1.5e-77
Identities = 41/94 (43%), Positives = 57/94 (60%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++G+ W+ ++N + ILADEMGLGKT+Q++ + LM++ GPFLI P
Sbjct: 614 GNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAP 673
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ 648
LST+ NW E E W P VV Y G R ++
Sbjct: 674 LSTIINWEREAELWCPDFYVVTYVGDRESRMVIR 707
Score = 73 (30.8 bits), Expect = 1.5e-77, Sum P(5) = 1.5e-77
Identities = 24/105 (22%), Positives = 51/105 (48%)
Query: 1057 DEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLI-EVSELPD---W 1112
++E+E ++ + N+ L S + TY +A+ + ++ +I E +E D W
Sbjct: 1157 NKEEEGQDGEKKEHWTNEYL--SSFKVATYNTKEADDADDDEDETEVIKEGTEEQDPNYW 1214
Query: 1113 LIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEW 1157
E++ + +E +E + +G+G R R+QV+Y ++W
Sbjct: 1215 -----EKLLKHHYEQDQETELQKLGKGKRVRRQVNYASENMGQDW 1254
Score = 52 (23.4 bits), Expect = 1.5e-77, Sum P(5) = 1.5e-77
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 268 ETAVNVKAYKRTKRQG-LKEARATEKLEKQQKVEAERKKRQKHQE 311
E +N A K KR+ L+ ARA+++ K+Q V E HQE
Sbjct: 227 EARINRAAAKVDKRKAALESARASKRARKEQGVVEEN-----HQE 266
Score = 49 (22.3 bits), Expect = 6.9e-39, Sum P(5) = 6.9e-39
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 1055 QDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLI 1114
Q++++ EE++ + + N L +++E+++ +R RR+E+ +K LP L
Sbjct: 1257 QNNQQQEEDDG-SEYGSDNGELLQTDEDYEERRR----RREERSEK--------LPPLLA 1303
Query: 1115 KEDEEIEQWAFEAKEEEKALH 1135
K + +IE F ++ KA +
Sbjct: 1304 KVNGQIEVLGFNPRQR-KAFY 1323
Score = 44 (20.5 bits), Expect = 1.1e-76, Sum P(6) = 1.1e-76
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 268 ETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQK 308
E +N + + ++ K+ A K+ +V + RKKR+K
Sbjct: 555 ERMLNDEVPRNVQKMIAKQREAKGLGPKEDEVTSRRKKREK 595
Score = 42 (19.8 bits), Expect = 1.5e-77, Sum P(5) = 1.5e-77
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 1249 SRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDELQKDFK 1289
S LP ++ + P+DI + ++ + +EL + K
Sbjct: 1431 SVSNLPGMIKIKEEPIDIDETPMDVDQSNITKTEELASEVK 1471
Score = 42 (19.8 bits), Expect = 1.6e-76, Sum P(5) = 1.6e-76
Identities = 12/53 (22%), Positives = 25/53 (47%)
Query: 285 KEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQ-ARIMR 336
++ R++ + +++ + E QE+ + QH K E + + ARI R
Sbjct: 180 QKTRSSARRKRRDGSDGEGGGHDSDQEFEALIKQHEKQQDEAEKGKEEARINR 232
Score = 40 (19.1 bits), Expect = 1.1e-76, Sum P(6) = 1.1e-76
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 188 LTNIPKPEGLDPLIILQERENRVALNIERRIEELN 222
LT IP+ E P I+ E R+ + R +E++
Sbjct: 359 LTEIPEGEWSCPRCIIPEPAQRIEKILSWRWKEIS 393
Score = 38 (18.4 bits), Expect = 1.2e-14, Sum P(5) = 1.2e-14
Identities = 6/32 (18%), Positives = 20/32 (62%)
Query: 1002 RVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1033
+V ++ T+ +++ +L + +NMD+ ++ +
Sbjct: 723 KVSKIKTLENLKFHVLLTSYECINMDKAILSS 754
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 621 (223.7 bits), Expect = 1.5e-77, Sum P(5) = 1.5e-77
Identities = 140/358 (39%), Positives = 211/358 (58%)
Query: 746 FNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSG 805
FN + T E E+++E+ I +LH +L P +LRRLK +V + +P K E I++ ++S
Sbjct: 814 FNQLESFTAEFSEISKEDQI---EKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSA 870
Query: 806 LQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDH 865
+QK Y K IL + L+N I++L+K CNHP++F ++
Sbjct: 871 MQKKYY-----KNILTRNFDALNVKNGGTQMSLINIIMELKKCCNHPYLF--MKACLEAP 923
Query: 866 VGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKY 925
+G+ G L + +GKF LL ++L KLK GHRVL+F QMT +++ILED+ G+KY
Sbjct: 924 KLKNGMYEGSALIKNAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKY 983
Query: 926 MRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQD 985
R+DG+ + R D + ++NAP ++ F+F+LSTRAGGLG+NL TADTVII+DSDWNPH D
Sbjct: 984 ERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHND 1043
Query: 986 LQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSER 1045
+QA RAHR+GQK++V + R +T SVEERI + A+ K+ + V++AG+ + +
Sbjct: 1044 IQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLTHLVVRAGLGAKDGKSMSK 1103
Query: 1046 HQFLQTILHQDDEE--DEEENAVP--DDETVNQMLARSEEEFQTYQRID--AERRKEQ 1097
+ L +L EE EEE V D E + +E +D +R KE+
Sbjct: 1104 TE-LDDVLRWGTEELFKEEEAPVEGADGEGTSSKKPNEQEIVWDDAAVDFLLDRNKEE 1160
Score = 298 (110.0 bits), Expect = 2.6e-41, Sum P(5) = 2.6e-41
Identities = 68/182 (37%), Positives = 108/182 (59%)
Query: 636 AYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCK 695
A +G P + K ++ KF+VLLT+YE + DK L+ + W +++DE HR+KN+
Sbjct: 717 AVRGGPKVSKI--KTLENLKFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQST 774
Query: 696 LTHILNTFYVAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGE 755
L + + +R+LLTGTPLQN L EL+ LLNFL P F + +F T E
Sbjct: 775 FFKNLREYNIQ-YRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESF----------TAE 823
Query: 756 KVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMH 815
E+++E+ I +LH +L P +LRRLK +V + +P K E I++ ++S +QK Y+++
Sbjct: 824 FSEISKEDQI---EKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNIL 880
Query: 816 TK 817
T+
Sbjct: 881 TR 882
Score = 222 (83.2 bits), Expect = 1.5e-77, Sum P(5) = 1.5e-77
Identities = 41/94 (43%), Positives = 57/94 (60%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++G+ W+ ++N + ILADEMGLGKT+Q++ + LM++ GPFLI P
Sbjct: 614 GNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAP 673
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ 648
LST+ NW E E W P VV Y G R ++
Sbjct: 674 LSTIINWEREAELWCPDFYVVTYVGDRESRMVIR 707
Score = 73 (30.8 bits), Expect = 1.5e-77, Sum P(5) = 1.5e-77
Identities = 24/105 (22%), Positives = 51/105 (48%)
Query: 1057 DEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLI-EVSELPD---W 1112
++E+E ++ + N+ L S + TY +A+ + ++ +I E +E D W
Sbjct: 1157 NKEEEGQDGEKKEHWTNEYL--SSFKVATYNTKEADDADDDEDETEVIKEGTEEQDPNYW 1214
Query: 1113 LIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEW 1157
E++ + +E +E + +G+G R R+QV+Y ++W
Sbjct: 1215 -----EKLLKHHYEQDQETELQKLGKGKRVRRQVNYASENMGQDW 1254
Score = 52 (23.4 bits), Expect = 1.5e-77, Sum P(5) = 1.5e-77
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 268 ETAVNVKAYKRTKRQG-LKEARATEKLEKQQKVEAERKKRQKHQE 311
E +N A K KR+ L+ ARA+++ K+Q V E HQE
Sbjct: 227 EARINRAAAKVDKRKAALESARASKRARKEQGVVEEN-----HQE 266
Score = 49 (22.3 bits), Expect = 6.9e-39, Sum P(5) = 6.9e-39
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 1055 QDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLI 1114
Q++++ EE++ + + N L +++E+++ +R RR+E+ +K LP L
Sbjct: 1257 QNNQQQEEDDG-SEYGSDNGELLQTDEDYEERRR----RREERSEK--------LPPLLA 1303
Query: 1115 KEDEEIEQWAFEAKEEEKALH 1135
K + +IE F ++ KA +
Sbjct: 1304 KVNGQIEVLGFNPRQR-KAFY 1323
Score = 44 (20.5 bits), Expect = 1.1e-76, Sum P(6) = 1.1e-76
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 268 ETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQK 308
E +N + + ++ K+ A K+ +V + RKKR+K
Sbjct: 555 ERMLNDEVPRNVQKMIAKQREAKGLGPKEDEVTSRRKKREK 595
Score = 42 (19.8 bits), Expect = 1.5e-77, Sum P(5) = 1.5e-77
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 1249 SRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDELQKDFK 1289
S LP ++ + P+DI + ++ + +EL + K
Sbjct: 1431 SVSNLPGMIKIKEEPIDIDETPMDVDQSNITKTEELASEVK 1471
Score = 42 (19.8 bits), Expect = 1.6e-76, Sum P(5) = 1.6e-76
Identities = 12/53 (22%), Positives = 25/53 (47%)
Query: 285 KEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQ-ARIMR 336
++ R++ + +++ + E QE+ + QH K E + + ARI R
Sbjct: 180 QKTRSSARRKRRDGSDGEGGGHDSDQEFEALIKQHEKQQDEAEKGKEEARINR 232
Score = 40 (19.1 bits), Expect = 1.1e-76, Sum P(6) = 1.1e-76
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 188 LTNIPKPEGLDPLIILQERENRVALNIERRIEELN 222
LT IP+ E P I+ E R+ + R +E++
Sbjct: 359 LTEIPEGEWSCPRCIIPEPAQRIEKILSWRWKEIS 393
Score = 38 (18.4 bits), Expect = 1.2e-14, Sum P(5) = 1.2e-14
Identities = 6/32 (18%), Positives = 20/32 (62%)
Query: 1002 RVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1033
+V ++ T+ +++ +L + +NMD+ ++ +
Sbjct: 723 KVSKIKTLENLKFHVLLTSYECINMDKAILSS 754
>UNIPROTKB|K7EMY3 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL031847 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AL035406
HGNC:HGNC:16816 Ensembl:ENST00000462991 Uniprot:K7EMY3
Length = 1060
Score = 586 (211.3 bits), Expect = 2.6e-77, Sum P(3) = 2.6e-77
Identities = 127/305 (41%), Positives = 186/305 (60%)
Query: 755 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHM 814
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+ +
Sbjct: 290 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFI 346
Query: 815 HTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSG 874
T+ + L+N ++ L+K CNHP++F + V +G G
Sbjct: 347 LTRNFEALNSK-----GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP--VLPNGSYDG 399
Query: 875 PDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKA 934
L + SGK LL ++L KL+ GHRVL+F QMT+++++LED+ Y G+KY R+DG
Sbjct: 400 SSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITG 459
Query: 935 EDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHR 994
R + + +FNAP ++ F F+LSTRAGGLG+NL TADTVII+DSDWNPH D+QA RAHR
Sbjct: 460 GLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHR 519
Query: 995 IGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILH 1054
IGQ +V + R +T SVEERI A+ K+ + V++ G+ KS GS Q L IL
Sbjct: 520 IGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGL-GSKS-GSMTKQELDDILK 577
Query: 1055 QDDEE 1059
EE
Sbjct: 578 FGTEE 582
Score = 299 (110.3 bits), Expect = 4.3e-45, Sum P(3) = 4.3e-45
Identities = 63/163 (38%), Positives = 102/163 (62%)
Query: 655 KFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTG 714
KF+VLLT+YE + D+ L + W +++DE HR+KN+ K +LN++ + ++LLLTG
Sbjct: 201 KFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKI-DYKLLLTG 259
Query: 715 TPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 774
TPLQN L EL+ LLNFL P F ++ F + F ++++E+ I ++LH +
Sbjct: 260 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 306
Query: 775 LRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK 817
L P +LRRLK +V +P K E I++ ++S +QK Y+ + T+
Sbjct: 307 LGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR 349
Score = 219 (82.2 bits), Expect = 2.6e-77, Sum P(3) = 2.6e-77
Identities = 42/94 (44%), Positives = 56/94 (59%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKT+QTI + L ++ GP+L+ P
Sbjct: 81 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAP 140
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ 648
LST+ NW EFE WAP VV Y G R ++
Sbjct: 141 LSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 174
Score = 101 (40.6 bits), Expect = 2.6e-77, Sum P(3) = 2.6e-77
Identities = 32/117 (27%), Positives = 61/117 (52%)
Query: 1057 DEEDEEENAVP--DDETVNQMLARSEE-----EFQTYQRIDAERRKEQGKKSRLIEVSEL 1109
D +D E+++V DD ++++L R+++ E Q + + Q V E+
Sbjct: 628 DNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEV 687
Query: 1110 PDWLIKEDEEIEQ--WA------FEAKEEEKALHMGRGSRQRKQVDYTDSLTE-KEW 1157
+IK++E ++ W +E ++E+ A ++G+G R RKQV+Y D+ E +EW
Sbjct: 688 EREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEW 744
Score = 49 (22.3 bits), Expect = 7.4e-72, Sum P(3) = 7.4e-72
Identities = 18/83 (21%), Positives = 43/83 (51%)
Query: 1055 QDDEEDEEENAVPDDETVNQMLARSEEE-FQTYQRIDAERRKEQGKKSRLIEVSE-LPDW 1112
Q+D+E ++E + D+++ + + E+E F+ +R + + + Q ++ + + LP
Sbjct: 739 QEDQEWQDE--LSDNQSEYSIGSEDEDEDFE--ERPEGQSGRRQSRRQLKSDRDKPLPPL 794
Query: 1113 LIKEDEEIEQWAFEAKEEEKALH 1135
L + IE F A++ + L+
Sbjct: 795 LARVGGNIEVLGFNARQRKAFLN 817
Score = 40 (19.1 bits), Expect = 7.6e-38, Sum P(4) = 7.6e-38
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 1027 DEKVIQAGMFDQKSTGSERH------QFLQTILHQDDEEDEEEN 1064
D+ Q G D+K G+++ Q L L + + ED+ E+
Sbjct: 950 DKMEAQLGYMDEKDPGAQKPRQPLEVQALPAALDRVESEDKHES 993
Score = 37 (18.1 bits), Expect = 8.9e-39, Sum P(4) = 8.9e-39
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 908 TQLMNILEDYFSYRGFKYM--RLDGTTKAEDRGDLLKKFNAPDSEYF 952
T+L N+ E S++ +Y+ DG + E +++K+ D +Y+
Sbjct: 659 TELQNMNEYLSSFKVAQYVVREEDGVEEVER--EIIKQEENVDPDYW 703
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 798 (286.0 bits), Expect = 2.9e-77, Sum P(2) = 2.9e-77
Identities = 206/596 (34%), Positives = 313/596 (52%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKTIQTI + L ++ GPFL+ P
Sbjct: 730 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 789
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPLA 674
LST+ NW EF+ WAP VV Y G R ++ + + N + + +
Sbjct: 790 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 849
Query: 675 KLH-----WKYMIIDEGHRMK-NHHCKLT---HILNTFYVAPHRLLLTGTPLQNKLPELW 725
K H ++ + ID+ C + H L R+L G + +KL
Sbjct: 850 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVL-NGYKIDHKLLLTG 908
Query: 726 ALLNFLLPSIFKSVSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 784
L L +F ++ + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 909 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLK 965
Query: 785 KEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQ 844
+V +P K E I++ ++S +QK Y+++ T+ L+N ++
Sbjct: 966 ADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNF-----EALNSRGGGNQVSLLNIMMD 1020
Query: 845 LRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLF 904
L+K CNHP++F + S + SG G L + SGK LL ++L KLK GHRVL+F
Sbjct: 1021 LKKCCNHPYLFP-VAAMESPKLP-SGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIF 1078
Query: 905 CQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLG 964
QMT+++++LED+ Y G+KY R+DG R + + +FNA ++ F F+LSTRAGGLG
Sbjct: 1079 SQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAHGAQQFCFLLSTRAGGLG 1138
Query: 965 LNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKL 1024
+NL TADTVIIFDSDWNPH D+QA RAHRIGQ N+V + R +T SVEERI A+ K+
Sbjct: 1139 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1198
Query: 1025 NMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE-----DEEENAVPDDETV---NQML 1076
+ V++ G+ + GS Q L IL EE +E EN D + N+ +
Sbjct: 1199 MLTHLVVRPGLGSK--AGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIHYDNEAI 1256
Query: 1077 ARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEA-KEEE 1131
AR + Q DA + + + ++ ++++E+++IE+ E K+EE
Sbjct: 1257 ARLLDRNQ-----DATEDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEE 1307
Score = 54 (24.1 bits), Expect = 2.9e-77, Sum P(2) = 2.9e-77
Identities = 20/72 (27%), Positives = 36/72 (50%)
Query: 254 RAEVIACARRDTTLETAVNVK-AYKRTKRQGLK-EARATEK-LEKQQKVEAERKKRQKHQ 310
RA + C D L+ A K + +++G++ EA+ E+ E++ + E E+++ H
Sbjct: 395 RAYHLVCL--DPELDRAPEGKWSCPHCEKEGVQWEAKEEEEDYEEEGEEEGEKEEEDDHM 452
Query: 311 EYITTVLQHCKD 322
EY CKD
Sbjct: 453 EYCRV----CKD 460
Score = 41 (19.5 bits), Expect = 6.8e-76, Sum P(2) = 6.8e-76
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 280 KRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVL 317
KR+ + +K ++++K E E ++Q Q+ T+L
Sbjct: 98 KRRRKHREKKEKKTKRRKKGEGEGGQKQVEQKSSATLL 135
Score = 41 (19.5 bits), Expect = 6.8e-76, Sum P(2) = 6.8e-76
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 267 LETAVNVKAYKR-TKRQGLKEA---RATEKLEKQQKVEAERKK-RQKHQ 310
L +A+ VK KR K+Q + R +KL+ +++ +ER + R+K +
Sbjct: 37 LPSALGVKKRKRGPKKQKENKPGKPRKRKKLDSEEEFGSERDEYREKSE 85
Score = 38 (18.4 bits), Expect = 1.4e-75, Sum P(2) = 1.4e-75
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 283 GLKEARATEKLEKQQKVEAERKKRQKHQE 311
G+K+ + K +K+ K RK+++ E
Sbjct: 42 GVKKRKRGPKKQKENKPGKPRKRKKLDSE 70
Score = 37 (18.1 bits), Expect = 1.8e-75, Sum P(2) = 1.8e-75
Identities = 6/9 (66%), Positives = 9/9 (100%)
Query: 303 RKKRQKHQE 311
RK+R+KH+E
Sbjct: 97 RKRRRKHRE 105
>UNIPROTKB|E1B7X9 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9913 "Bos taurus" [GO:0035861 "site of
double-strand break" evidence=ISS] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISS] [GO:0000729 "DNA double-strand
break processing" evidence=ISS] [GO:0070933 "histone H4
deacetylation" evidence=ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0051304 "chromosome separation"
evidence=ISS] [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0000729
GO:GO:0000018 GO:GO:0035861 GeneTree:ENSGT00630000089890
GO:GO:0051304 EMBL:DAAA02016925 EMBL:DAAA02016926 IPI:IPI00826348
UniGene:Bt.77636 Ensembl:ENSBTAT00000047936 OMA:KNQRGIQ
Uniprot:E1B7X9
Length = 1028
Score = 513 (185.6 bits), Expect = 3.5e-77, Sum P(2) = 3.5e-77
Identities = 124/317 (39%), Positives = 180/317 (56%)
Query: 546 TEQASILVNG-KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKK 604
TEQ SIL LK YQ GL W+ + + LNGILADEMGLGKTIQ IA + YL ++
Sbjct: 487 TEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN 546
Query: 605 VNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKA--SKFNVLLTT 662
GP LI+VP ST+ NW E W P++ V+ Y GS RK ++ + + ++NV++TT
Sbjct: 547 -KGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSRYEEYNVIVTT 605
Query: 663 YEYVIK---DKGPLAKLHWKYMIIDEGHRMKNH-HCKLTHILNTFYVAPHRLLLTGTPLQ 718
Y I D+ +L Y I DEGH +KN + H++ A +RLLLTGTP+Q
Sbjct: 606 YNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTIN--ANNRLLLTGTPVQ 663
Query: 719 NKLPELWALLNFLLPSIFKS-VSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRP 777
N L EL +LLNF++P +F S S + F++ E+ + E+E I ++ +++P
Sbjct: 664 NNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQ-SIYEKERIAHAKQ---IIKP 719
Query: 778 FLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXX 837
F+LRR+K+EV QLP K + I C MS Q+ LY ++ + + E
Sbjct: 720 FILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYMNLFNRLKKSINNMEKNTE------- 772
Query: 838 LMNTIVQLRKLCNHPFM 854
+ N ++QLRK+ NHP +
Sbjct: 773 MCNVMMQLRKMANHPLL 789
Score = 351 (128.6 bits), Expect = 3.5e-77, Sum P(2) = 3.5e-77
Identities = 73/176 (41%), Positives = 112/176 (63%)
Query: 876 DLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAE 935
DL SGKF +L IL +LK G RV+LF Q T +++ILE + +Y+RLDG T+
Sbjct: 850 DLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQIS 909
Query: 936 DRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRI 995
+R L+ +FN D + F+F+LST+AGGLG+NL +A+ VI+ D D NP+ D QA+DR HR+
Sbjct: 910 ERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRV 968
Query: 996 GQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQT 1051
GQ EV V++L+ ++EE +L + KL +++ + D+ S ++ L+T
Sbjct: 969 GQTKEVLVIKLIGQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSMPADIATLLKT 1024
>UNIPROTKB|Q9H4L7 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0009117 "nucleotide metabolic process" evidence=NAS]
[GO:0003676 "nucleic acid binding" evidence=NAS] [GO:0016363
"nuclear matrix" evidence=NAS] [GO:0051260 "protein
homooligomerization" evidence=NAS] [GO:0000018 "regulation of DNA
recombination" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0016568 "chromatin
modification" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0000729
"DNA double-strand break processing" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0035861
"site of double-strand break" evidence=IDA] [GO:0043596 "nuclear
replication fork" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=NAS] [GO:0051304 "chromosome separation" evidence=IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IMP] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR003892 InterPro:IPR009060
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0045893 GO:GO:0003677
GO:GO:0009117 GO:GO:0051260 GO:GO:0043596 GO:GO:0004386
GO:GO:0016363 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000729 GO:GO:0000018
HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439 GO:GO:0051304
OMA:KNQRGIQ EMBL:AY008271 EMBL:AB032948 EMBL:AK023990 EMBL:AK027490
EMBL:AK301668 EMBL:AC096746 EMBL:BC017953 EMBL:BC045534
EMBL:AL359929 EMBL:AL512768 IPI:IPI00008422 IPI:IPI00220119
RefSeq:NP_001121901.1 RefSeq:NP_001121902.1 RefSeq:NP_001241878.1
RefSeq:NP_064544.2 UniGene:Hs.410406 ProteinModelPortal:Q9H4L7
SMR:Q9H4L7 STRING:Q9H4L7 PhosphoSite:Q9H4L7 DMDM:306526240
PaxDb:Q9H4L7 PRIDE:Q9H4L7 DNASU:56916 Ensembl:ENST00000354268
Ensembl:ENST00000359052 Ensembl:ENST00000457823
Ensembl:ENST00000509418 GeneID:56916 KEGG:hsa:56916 UCSC:uc003htb.4
UCSC:uc003htc.4 CTD:56916 GeneCards:GC04P095128 H-InvDB:HIX0004380
HGNC:HGNC:18398 HPA:HPA016737 MIM:136000 MIM:612761
neXtProt:NX_Q9H4L7 Orphanet:289465 PharmGKB:PA134954731
HOVERGEN:HBG055804 ChiTaRS:SMARCAD1 GenomeRNAi:56916 NextBio:62407
ArrayExpress:Q9H4L7 Bgee:Q9H4L7 CleanEx:HS_SMARCAD1
Genevestigator:Q9H4L7 GermOnline:ENSG00000163104 Uniprot:Q9H4L7
Length = 1026
Score = 510 (184.6 bits), Expect = 3.6e-77, Sum P(2) = 3.6e-77
Identities = 123/316 (38%), Positives = 178/316 (56%)
Query: 547 EQASILVNG-KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKV 605
EQ SIL LK YQ GL W+ + + LNGILADEMGLGKTIQ IA + YL ++
Sbjct: 486 EQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN- 544
Query: 606 NGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKA--SKFNVLLTTY 663
NGP LI+VP ST+ NW E W P++ V+ Y GS RK ++ + + +NV++TTY
Sbjct: 545 NGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTY 604
Query: 664 EYVIK---DKGPLAKLHWKYMIIDEGHRMKNH-HCKLTHILNTFYVAPHRLLLTGTPLQN 719
I D+ +L Y I DEGH +KN + H++ A +RLLLTGTP+QN
Sbjct: 605 NCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTIN--ANNRLLLTGTPVQN 662
Query: 720 KLPELWALLNFLLPSIFKS-VSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPF 778
L EL +LLNF++P +F S S + F++ + E+ + E+E I ++ +++PF
Sbjct: 663 NLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQ-SIYEKERIAHAKQ---IIKPF 718
Query: 779 LLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXL 838
+LRR+K+EV QLP K + I C MS Q+ LY + + + +
Sbjct: 719 ILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNR-------LKKSINNLEKNTEM 771
Query: 839 MNTIVQLRKLCNHPFM 854
N ++QLRK+ NHP +
Sbjct: 772 CNVMMQLRKMANHPLL 787
Score = 354 (129.7 bits), Expect = 3.6e-77, Sum P(2) = 3.6e-77
Identities = 73/176 (41%), Positives = 113/176 (64%)
Query: 876 DLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAE 935
DL SGKF +L IL +LK G RV+LF Q T +++ILE + +Y+RLDG T+
Sbjct: 848 DLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQIS 907
Query: 936 DRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRI 995
+R L+ +FN D + F+F+LST+AGGLG+NL +A+ VI+ D D NP+ D QA+DR HR+
Sbjct: 908 ERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRV 966
Query: 996 GQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQT 1051
GQ EV V++L++ ++EE +L + KL +++ + D+ S ++ L+T
Sbjct: 967 GQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSMPADIATLLKT 1022
>UNIPROTKB|F1RWW3 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051304
"chromosome separation" evidence=IEA] [GO:0043596 "nuclear
replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
EMBL:CU951443 Ensembl:ENSSSCT00000010066 Uniprot:F1RWW3
Length = 1029
Score = 510 (184.6 bits), Expect = 4.6e-77, Sum P(2) = 4.6e-77
Identities = 124/316 (39%), Positives = 179/316 (56%)
Query: 547 EQASILVNG-KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKV 605
EQ SIL LK YQ GL W+ + + LNGILADEMGLGKTIQ IA + YL ++
Sbjct: 489 EQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN- 547
Query: 606 NGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQM--KASKFNVLLTTY 663
GP LI+VP ST+ NW E W P++ V+ Y GS RK ++ + K ++NV++TTY
Sbjct: 548 KGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYNVIVTTY 607
Query: 664 EYVIK---DKGPLAKLHWKYMIIDEGHRMKNH-HCKLTHILNTFYVAPHRLLLTGTPLQN 719
I D+ +L Y I DEGH +KN + H++ A +RLLLTGTP+QN
Sbjct: 608 NCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTIN--ANNRLLLTGTPVQN 665
Query: 720 KLPELWALLNFLLPSIFKS-VSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPF 778
L EL +LLNF++P +F S S + F++ + E+ + E+E I ++ +++PF
Sbjct: 666 NLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQ-SIYEKERIAHAKQ---IIKPF 721
Query: 779 LLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXL 838
+LRR+K+EV QLP K + I C MS Q+ LY + + + E +
Sbjct: 722 ILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNMEKNTE-------M 774
Query: 839 MNTIVQLRKLCNHPFM 854
N ++QLRK+ NHP +
Sbjct: 775 CNVMMQLRKMANHPLL 790
Score = 353 (129.3 bits), Expect = 4.6e-77, Sum P(2) = 4.6e-77
Identities = 73/176 (41%), Positives = 113/176 (64%)
Query: 876 DLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAE 935
DL SGKF +L IL +LK G RV+LF Q T +++ILE + +Y+RLDG T+
Sbjct: 851 DLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQIS 910
Query: 936 DRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRI 995
+R L+ +FN D + F+F+LST+AGGLG+NL +A+ VI+ D D NP+ D QA+DR HR+
Sbjct: 911 ERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRV 969
Query: 996 GQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQT 1051
GQ EV V++L++ ++EE +L + KL +++ + D+ S ++ L+T
Sbjct: 970 GQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTIDEGDEGSMPADIATLLKT 1025
>UNIPROTKB|E2RG62 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0051304 "chromosome separation" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 EMBL:AAEX03016768
EMBL:AAEX03016769 Ensembl:ENSCAFT00000015951 Uniprot:E2RG62
Length = 1026
Score = 511 (184.9 bits), Expect = 5.7e-77, Sum P(2) = 5.7e-77
Identities = 123/316 (38%), Positives = 178/316 (56%)
Query: 547 EQASILVNG-KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKV 605
EQ SIL LK YQ GL W+ + + LNGILADEMGLGKTIQ IA + YL ++
Sbjct: 486 EQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN- 544
Query: 606 NGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQM--KASKFNVLLTTY 663
GP LI+VP ST+ NW E W P++ V+ Y GS RK ++ + K ++NV++TTY
Sbjct: 545 KGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYNVIVTTY 604
Query: 664 EYVIK---DKGPLAKLHWKYMIIDEGHRMKNH-HCKLTHILNTFYVAPHRLLLTGTPLQN 719
I D+ +L Y I DEGH +KN + H++ A +RLLLTGTP+QN
Sbjct: 605 NCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTIN--ANNRLLLTGTPVQN 662
Query: 720 KLPELWALLNFLLPSIFKS-VSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPF 778
L EL +LLNF++P +F S S + F++ + E+ + E+E I ++ +++PF
Sbjct: 663 NLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQ-SIYEKERIAHAKQ---IIKPF 718
Query: 779 LLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXL 838
+LRR+K+EV QLP K + I C MS Q+ LY + + + +
Sbjct: 719 ILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNR-------LKKSINNIEKSTEM 771
Query: 839 MNTIVQLRKLCNHPFM 854
N ++QLRK+ NHP +
Sbjct: 772 CNVMMQLRKMANHPLL 787
Score = 351 (128.6 bits), Expect = 5.7e-77, Sum P(2) = 5.7e-77
Identities = 72/176 (40%), Positives = 113/176 (64%)
Query: 876 DLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAE 935
DL SGKF +L IL +LK G RV+LF Q T +++ILE + +Y+RLDG T+
Sbjct: 848 DLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQIS 907
Query: 936 DRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRI 995
+R L+ +FN D + F+F+LST+AGGLG+NL +A+ VI+ D D NP+ D QA+DR HR+
Sbjct: 908 ERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRV 966
Query: 996 GQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQT 1051
GQ EV V++L++ ++EE +L + KL +++ + D+ + ++ L+T
Sbjct: 967 GQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGTMPADIATLLKT 1022
>UNIPROTKB|J9NX47 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
EMBL:AAEX03016768 EMBL:AAEX03016769 Ensembl:ENSCAFT00000044961
Uniprot:J9NX47
Length = 1026
Score = 511 (184.9 bits), Expect = 5.7e-77, Sum P(2) = 5.7e-77
Identities = 123/316 (38%), Positives = 178/316 (56%)
Query: 547 EQASILVNG-KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKV 605
EQ SIL LK YQ GL W+ + + LNGILADEMGLGKTIQ IA + YL ++
Sbjct: 486 EQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN- 544
Query: 606 NGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQM--KASKFNVLLTTY 663
GP LI+VP ST+ NW E W P++ V+ Y GS RK ++ + K ++NV++TTY
Sbjct: 545 KGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYNVIVTTY 604
Query: 664 EYVIK---DKGPLAKLHWKYMIIDEGHRMKNH-HCKLTHILNTFYVAPHRLLLTGTPLQN 719
I D+ +L Y I DEGH +KN + H++ A +RLLLTGTP+QN
Sbjct: 605 NCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTIN--ANNRLLLTGTPVQN 662
Query: 720 KLPELWALLNFLLPSIFKS-VSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPF 778
L EL +LLNF++P +F S S + F++ + E+ + E+E I ++ +++PF
Sbjct: 663 NLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQ-SIYEKERIAHAKQ---IIKPF 718
Query: 779 LLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXL 838
+LRR+K+EV QLP K + I C MS Q+ LY + + + +
Sbjct: 719 ILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNR-------LKKSINNIEKSTEM 771
Query: 839 MNTIVQLRKLCNHPFM 854
N ++QLRK+ NHP +
Sbjct: 772 CNVMMQLRKMANHPLL 787
Score = 351 (128.6 bits), Expect = 5.7e-77, Sum P(2) = 5.7e-77
Identities = 72/176 (40%), Positives = 113/176 (64%)
Query: 876 DLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAE 935
DL SGKF +L IL +LK G RV+LF Q T +++ILE + +Y+RLDG T+
Sbjct: 848 DLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQIS 907
Query: 936 DRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRI 995
+R L+ +FN D + F+F+LST+AGGLG+NL +A+ VI+ D D NP+ D QA+DR HR+
Sbjct: 908 ERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRV 966
Query: 996 GQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQT 1051
GQ EV V++L++ ++EE +L + KL +++ + D+ + ++ L+T
Sbjct: 967 GQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGTMPADIATLLKT 1022
>UNIPROTKB|J9PA79 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
OMA:KNQRGIQ EMBL:AAEX03016768 EMBL:AAEX03016769
Ensembl:ENSCAFT00000043847 Uniprot:J9PA79
Length = 1026
Score = 511 (184.9 bits), Expect = 5.7e-77, Sum P(2) = 5.7e-77
Identities = 123/316 (38%), Positives = 178/316 (56%)
Query: 547 EQASILVNG-KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKV 605
EQ SIL LK YQ GL W+ + + LNGILADEMGLGKTIQ IA + YL ++
Sbjct: 486 EQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN- 544
Query: 606 NGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQM--KASKFNVLLTTY 663
GP LI+VP ST+ NW E W P++ V+ Y GS RK ++ + K ++NV++TTY
Sbjct: 545 KGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYNVIVTTY 604
Query: 664 EYVIK---DKGPLAKLHWKYMIIDEGHRMKNH-HCKLTHILNTFYVAPHRLLLTGTPLQN 719
I D+ +L Y I DEGH +KN + H++ A +RLLLTGTP+QN
Sbjct: 605 NCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTIN--ANNRLLLTGTPVQN 662
Query: 720 KLPELWALLNFLLPSIFKS-VSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPF 778
L EL +LLNF++P +F S S + F++ + E+ + E+E I ++ +++PF
Sbjct: 663 NLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQ-SIYEKERIAHAKQ---IIKPF 718
Query: 779 LLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXL 838
+LRR+K+EV QLP K + I C MS Q+ LY + + + +
Sbjct: 719 ILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNR-------LKKSINNIEKSTEM 771
Query: 839 MNTIVQLRKLCNHPFM 854
N ++QLRK+ NHP +
Sbjct: 772 CNVMMQLRKMANHPLL 787
Score = 351 (128.6 bits), Expect = 5.7e-77, Sum P(2) = 5.7e-77
Identities = 72/176 (40%), Positives = 113/176 (64%)
Query: 876 DLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAE 935
DL SGKF +L IL +LK G RV+LF Q T +++ILE + +Y+RLDG T+
Sbjct: 848 DLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQIS 907
Query: 936 DRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRI 995
+R L+ +FN D + F+F+LST+AGGLG+NL +A+ VI+ D D NP+ D QA+DR HR+
Sbjct: 908 ERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRV 966
Query: 996 GQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQT 1051
GQ EV V++L++ ++EE +L + KL +++ + D+ + ++ L+T
Sbjct: 967 GQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGTMPADIATLLKT 1022
>UNIPROTKB|Q5FWR0 [details] [associations]
symbol:smarcad1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439
HOVERGEN:HBG055804 OrthoDB:EOG4RV2QW EMBL:AAMC01061573
EMBL:AAMC01061574 EMBL:AAMC01061575 EMBL:BC089242
RefSeq:NP_001015697.1 UniGene:Str.34312 ProteinModelPortal:Q5FWR0
GeneID:548414 KEGG:xtr:548414 Xenbase:XB-GENE-492700
InParanoid:Q5FWR0 Uniprot:Q5FWR0
Length = 1003
Score = 513 (185.6 bits), Expect = 9.0e-77, Sum P(3) = 9.0e-77
Identities = 124/316 (39%), Positives = 179/316 (56%)
Query: 547 EQASILV-NGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKV 605
EQ SI+ N LK YQ GL W+ L + +N ILADEMGLGKT+Q IA + +L
Sbjct: 463 EQPSIMSENLVLKPYQKIGLNWLALLHKHKVNMILADEMGLGKTVQAIAFLAHLYVTGD- 521
Query: 606 NGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQM--KASKFNVLLTTY 663
+GP L++VP ST+ NW EF +W PS+N++ Y GS RK L+ + K +FNV++TTY
Sbjct: 522 SGPHLVVVPASTMDNWIREFNQWCPSMNILLYYGSQEERKHLRYDILNKVVEFNVIVTTY 581
Query: 664 EYVI---KDKGPLAKLHWKYMIIDEGHRMKNHHC-KLTHILNTFYVAPHRLLLTGTPLQN 719
I +D+ +L + + DEGH +KN + H++ A RLLLTGTP+QN
Sbjct: 582 NCAISSAEDRSLFRRLKLNFAVFDEGHMLKNMSAIRYQHLMTLN--ARSRLLLTGTPVQN 639
Query: 720 KLPELWALLNFLLPSIFKS-VSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPF 778
L EL +LLNF++P +F S S ++ F++ +T E+ +E I ++++PF
Sbjct: 640 NLLELMSLLNFVMPHMFSSSTSEIKRLFSSKAKSTDEQTIFEKER----IAHAKQIMKPF 695
Query: 779 LLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXL 838
+LRR+K EV QLP K + I C MS Q+ LY + K D +E L
Sbjct: 696 ILRRVKSEVLKQLPPKQDKIKFCQMSKKQEQLYSDLLNKLKKSIDATEKNSE-------L 748
Query: 839 MNTIVQLRKLCNHPFM 854
N ++ LRK+ NHP +
Sbjct: 749 CNVMMHLRKMANHPLL 764
Score = 354 (129.7 bits), Expect = 9.0e-77, Sum P(3) = 9.0e-77
Identities = 69/173 (39%), Positives = 114/173 (65%)
Query: 881 SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL 940
SGKF +L+++L +K G RV+LF Q T +++I+E + + +Y+RLDG T+ +R L
Sbjct: 830 SGKFNILEKLLSDIKKKGDRVVLFSQFTMMLDIIEVFLRHHQHRYVRLDGKTQISERIHL 889
Query: 941 LKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 1000
+ +FN D + FIF+LST+AGGLG+NL +A+ VI+ D D NP+ D QA+DR HR+GQ E
Sbjct: 890 IDEFNT-DMDIFIFLLSTKAGGLGINLTSANIVILHDIDCNPYNDKQAEDRCHRVGQTKE 948
Query: 1001 VRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTIL 1053
V+V++L+ ++EE +L ++ KL +++ + D+ + + L+T L
Sbjct: 949 VKVIKLIGKGTIEESMLKISQQKLRLEQDMTTNDTGDEGTIPLDMATLLKTSL 1001
Score = 39 (18.8 bits), Expect = 9.0e-77, Sum P(3) = 9.0e-77
Identities = 11/48 (22%), Positives = 25/48 (52%)
Query: 184 KQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPE 231
K +K + + D +++ERE V + + + EE++ +LT + +
Sbjct: 406 KMTKSNGLSEDLIWDCQTLIKERE--VVMKLMNKCEEISRTLTKQVTQ 451
Score = 38 (18.4 bits), Expect = 1.1e-76, Sum P(3) = 1.1e-76
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 263 RDTT-LETAVNVKAYKRTKRQGLKEARATEKLEKQ-QKVEAERKKRQKH-----QEYITT 315
+D++ + +N + K+ K + + E +K EA KK Q+H +E +
Sbjct: 184 KDSSPVHEGINGQTKKKKKIDRVSSDNDSSLSEDDWEKQEASVKKLQRHFPDLDKEELRE 243
Query: 316 VLQ-HCKDFKE 325
VLQ H F E
Sbjct: 244 VLQEHDWSFHE 254
>MGI|MGI:95453 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:10090 "Mus musculus" [GO:0000018 "regulation
of DNA recombination" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO] [GO:0043596 "nuclear replication fork" evidence=ISO]
[GO:0051304 "chromosome separation" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95453 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0043596 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0000792 GO:GO:0070932 GO:GO:0070933
GO:GO:0000729 GO:GO:0000018 HOGENOM:HOG000172362 GO:GO:0035861
KO:K14439 GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
CTD:56916 HOVERGEN:HBG055804 EMBL:X69942 EMBL:AK122454
EMBL:BC042442 EMBL:AK134442 EMBL:AK147884 IPI:IPI00223926
IPI:IPI00556837 PIR:A56559 RefSeq:NP_001240321.1 RefSeq:NP_031984.1
UniGene:Mm.99113 ProteinModelPortal:Q04692 SMR:Q04692 STRING:Q04692
PhosphoSite:Q04692 PaxDb:Q04692 PRIDE:Q04692
Ensembl:ENSMUST00000031984 GeneID:13990 KEGG:mmu:13990
UCSC:uc009ced.1 UCSC:uc012emw.1 InParanoid:Q04692 OrthoDB:EOG4RV2QW
NextBio:284868 Bgee:Q04692 Genevestigator:Q04692
GermOnline:ENSMUSG00000029920 Uniprot:Q04692
Length = 1021
Score = 507 (183.5 bits), Expect = 9.5e-77, Sum P(2) = 9.5e-77
Identities = 123/316 (38%), Positives = 176/316 (55%)
Query: 547 EQASILVNG-KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKV 605
EQ S+L LK YQ GL W+ + + LNGILADEMGLGKTIQ IA + YL ++
Sbjct: 481 EQPSLLNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGN- 539
Query: 606 NGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQM--KASKFNVLLTTY 663
GP LI+VP ST+ NW E W PS+NV+ Y GS RK ++ + K +NV++TTY
Sbjct: 540 KGPHLIVVPASTIDNWLREVNLWCPSLNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTTY 599
Query: 664 EYVIK---DKGPLAKLHWKYMIIDEGHRMKNH-HCKLTHILNTFYVAPHRLLLTGTPLQN 719
I D+ +L Y I DEGH +KN + H++ A +RLLLTGTP+QN
Sbjct: 600 NCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTIN--ARNRLLLTGTPVQN 657
Query: 720 KLPELWALLNFLLPSIFKS-VSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPF 778
L EL +LLNF++P +F S S + F++ E+ + E+E I ++ +++PF
Sbjct: 658 NLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQ-SIYEKERIAHAKQ---IIKPF 713
Query: 779 LLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXL 838
+LRR+K+EV LP K + I C MS Q+ LY + + + +
Sbjct: 714 ILRRVKEEVLKLLPPKKDRIELCAMSEKQEQLYSGLFNR-------LKKSINNLEKNTEM 766
Query: 839 MNTIVQLRKLCNHPFM 854
N ++QLRK+ NHP +
Sbjct: 767 CNVMMQLRKMANHPLL 782
Score = 353 (129.3 bits), Expect = 9.5e-77, Sum P(2) = 9.5e-77
Identities = 73/176 (41%), Positives = 112/176 (63%)
Query: 876 DLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAE 935
DL SGKF L IL +LK G RV+LF Q T +++ILE + +Y+RLDG T+
Sbjct: 843 DLILDSGKFRALGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQIS 902
Query: 936 DRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRI 995
+R L+ +FN D + F+F+LST+AGGLG+NL +A+ VI+ D D NP+ D QA+DR HR+
Sbjct: 903 ERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRV 961
Query: 996 GQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQT 1051
GQ EV V++L++ ++EE +L + KL +++ + D+ S ++ L+T
Sbjct: 962 GQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEADEGSMPADIATLLKT 1017
>DICTYBASE|DDB_G0267556 [details] [associations]
symbol:DDB_G0267556 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0267556
GO:GO:0005524 GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:XP_647125.1 ProteinModelPortal:Q55GQ9
EnsemblProtists:DDB0233433 GeneID:8615929 KEGG:ddi:DDB_G0267556
InParanoid:Q55GQ9 OMA:CANVVIF ProtClustDB:CLSZ2501118
Uniprot:Q55GQ9
Length = 1159
Score = 544 (196.6 bits), Expect = 1.5e-76, Sum P(4) = 1.5e-76
Identities = 114/280 (40%), Positives = 170/280 (60%)
Query: 542 HEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLME 601
H++V + ++N ++ YQ+ GL WM L+ +NGILADEMGLGKT+QTI+L+ ++ E
Sbjct: 529 HKLVAQPK--IINKVMRNYQLIGLNWMAVLYKEKINGILADEMGLGKTVQTISLLAHIKE 586
Query: 602 KKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASK----FN 657
NGP L++VP + L+NW EF+ W PS+++V Y G+ R+ L+ ++K + FN
Sbjct: 587 AYNDNGPHLVVVPATILANWEREFQTWCPSLSIVRYYGNLREREELRYELKKKRPGKDFN 646
Query: 658 VLLTTYEYVI--KDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYV-APHRLLLTG 714
V+LTTY + D+G L + + ++I+DE +KN K N F + A HRLLLTG
Sbjct: 647 VILTTYNLLFANNDRGFLKRFDYSFLILDEAQNIKNSDSK--RYKNIFKIGAHHRLLLTG 704
Query: 715 TPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 774
TPLQN L ELW+LLNFL+P IF SV N + +E N ++ I R+ K+
Sbjct: 705 TPLQNNLYELWSLLNFLMPHIFGSVKKDNYLLN-------QLLEYNGDDCDSAITRMKKI 757
Query: 775 LRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHM 814
L PF+LRRLK V +L K+E++ C + Q Y+++
Sbjct: 758 LSPFILRRLKSTVSKELKPKIEHVEICKLPKFQDETYKNI 797
Score = 300 (110.7 bits), Expect = 1.5e-76, Sum P(4) = 1.5e-76
Identities = 69/216 (31%), Positives = 121/216 (56%)
Query: 840 NTIVQLRKLCNHPFMFQNIEEKFSDH--VGGSGIVSGPDLYRVSGKFELLDRILPK-LKS 896
N I L++L + + ++ + +H +G + S K L IL K +
Sbjct: 941 NDIPSLKELFD-TYSDYDVFKTVCEHEDLGDKYWIPDEQFIETSTKCLKLKEILAKEIGV 999
Query: 897 TGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVL 956
+VL+F QMT++++ILED G+ + RLDG+T +R ++ F++ ++ +F+L
Sbjct: 1000 NKSKVLIFSQMTRVLDILEDVLDIFGYNFTRLDGSTPVNERQSIIDHFSSKET-IPVFLL 1058
Query: 957 STRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERI 1016
ST +GGLG+NL A+ VI +D +NP D QA+DRAHR+GQ+ EV + +L+ N+V+ I
Sbjct: 1059 STNSGGLGINLTCANVVIFYDLSFNPQVDRQAEDRAHRLGQEREVIIYKLLAENTVDINI 1118
Query: 1017 LAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTI 1052
+A K +++ V++ G F+ T + L+ +
Sbjct: 1119 HESANQKKKLNDNVLEEGTFNNAETKLQSKNILKIL 1154
Score = 60 (26.2 bits), Expect = 1.5e-76, Sum P(4) = 1.5e-76
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 838 LMNTIVQLRKLCNHPFMFQNI 858
L N ++QLRK NHP + +NI
Sbjct: 895 LNNILMQLRKAANHPLLCKNI 915
Score = 55 (24.4 bits), Expect = 6.6e-50, Sum P(4) = 6.6e-50
Identities = 15/88 (17%), Positives = 41/88 (46%)
Query: 1069 DETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAK 1128
DET ++ RS+ +++ + ++ KE+ +K + ++ + K+ + +
Sbjct: 791 DETYKNIIERSKSQWKLRNELLLKKEKEEKEKEKQSLINSSNSSIKKKRKTSSIYKNNKI 850
Query: 1129 EEEKALHMGRGSRQRKQVDYTDSLTEKE 1156
E+++ + + G +D T + EK+
Sbjct: 851 EKDEIIEIDDGGDDDGLIDLTKTNDEKD 878
Score = 49 (22.3 bits), Expect = 2.0e-50, Sum P(4) = 2.0e-50
Identities = 24/81 (29%), Positives = 39/81 (48%)
Query: 1247 LPSRKELPDYYEVIDRPMDIKKILGRIED--GKYSSVDELQKDFKTLC-RNAQIYNEELS 1303
+PS KEL D Y D D+ K + ED KY DE + T C + +I +E+
Sbjct: 943 IPSLKELFDTYS--D--YDVFKTVCEHEDLGDKYWIPDEQFIETSTKCLKLKEILAKEIG 998
Query: 1304 LIHEDSVVLESVFTKARQRVE 1324
+++ V++ S T+ +E
Sbjct: 999 -VNKSKVLIFSQMTRVLDILE 1018
Score = 49 (22.3 bits), Expect = 1.2e-22, Sum P(4) = 1.2e-22
Identities = 22/89 (24%), Positives = 38/89 (42%)
Query: 225 LTSTLPEHLRVKAEIELRALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTK---R 281
L ST+ + L+ K E + K+ FQ + +I ++ L + +K K K +
Sbjct: 766 LKSTVSKELKPKIE-HVEICKLPKFQDETYKNIIERSKSQWKLRNELLLKKEKEEKEKEK 824
Query: 282 QGL--------KEARATEKLEKQQKVEAE 302
Q L K+ R T + K K+E +
Sbjct: 825 QSLINSSNSSIKKKRKTSSIYKNNKIEKD 853
Score = 46 (21.3 bits), Expect = 1.5e-76, Sum P(4) = 1.5e-76
Identities = 18/97 (18%), Positives = 43/97 (44%)
Query: 204 QERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLRAEVIACARR 263
+E E + +N +R+ L+GS T T P+ +I + ++ E+
Sbjct: 374 EEEEEVLFVNKKRKSNPLDGSSTPTKPKSKPKPKKIIIEDDSETEDEKSQIIEIDDEKEE 433
Query: 264 DTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVE 300
+ +E V+ ++ +++ +E E++E + +E
Sbjct: 434 EKQVEQVEQVEQVEQVEQEEGEEEEE-EEIESEPTIE 469
Score = 44 (20.5 bits), Expect = 2.4e-76, Sum P(4) = 2.4e-76
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 272 NVKAYKRTKRQGLKEARATEKLEKQQKV 299
NV +R K+Q +E +++ LE+ +K+
Sbjct: 134 NVSVEQRKKKQKQQEQESSKLLEETEKL 161
Score = 40 (19.1 bits), Expect = 1.2e-22, Sum P(4) = 1.2e-22
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 433 DTDGKVTLDQDETSQLTDMHISVREISSG 461
D DG + D +T+ DM +S++ S+G
Sbjct: 863 DDDGLI--DLTKTNDEKDMELSIKLKSNG 889
Score = 39 (18.8 bits), Expect = 8.1e-76, Sum P(4) = 8.1e-76
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 302 ERKKRQKHQE 311
+RKK+QK QE
Sbjct: 139 QRKKKQKQQE 148
Score = 39 (18.8 bits), Expect = 8.1e-76, Sum P(4) = 8.1e-76
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 274 KAYKRTKRQGLKEARATEKLEKQQKV 299
K K+ +++ K TEKL KQ V
Sbjct: 142 KKQKQQEQESSKLLEETEKLLKQPSV 167
Score = 39 (18.8 bits), Expect = 8.1e-76, Sum P(4) = 8.1e-76
Identities = 7/33 (21%), Positives = 18/33 (54%)
Query: 280 KRQGLKEARATEKLEKQQKVEAERKKRQKHQEY 312
K +K+ + ++K+E+ ++ E E + E+
Sbjct: 98 KSSPIKKKKQSKKVEEDEEDEDEEDEEDDEDEF 130
>RGD|1309640 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1`" species:10116 "Rattus norvegicus" [GO:0000018
"regulation of DNA recombination" evidence=IEA;ISO] [GO:0000729
"DNA double-strand break processing" evidence=ISO;ISS] [GO:0000792
"heterochromatin" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0035861 "site of double-strand break"
evidence=ISO;ISS] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO;ISS] [GO:0043596 "nuclear replication fork"
evidence=IEA;ISO] [GO:0051304 "chromosome separation"
evidence=ISO;ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISO;ISS] [GO:0070933 "histone H4 deacetylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 RGD:1309640 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000729 GO:GO:0000018 GO:GO:0035861 KO:K14439
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ CTD:56916
OrthoDB:EOG4RV2QW EMBL:AABR03032021 IPI:IPI00765483
RefSeq:NP_001101334.2 UniGene:Rn.7758 ProteinModelPortal:D3Z9Z9
Ensembl:ENSRNOT00000008585 GeneID:312398 KEGG:rno:312398
UCSC:RGD:1309640 Uniprot:D3Z9Z9
Length = 1024
Score = 505 (182.8 bits), Expect = 1.6e-76, Sum P(2) = 1.6e-76
Identities = 122/316 (38%), Positives = 176/316 (55%)
Query: 547 EQASILVNG-KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKV 605
EQ S+L LK YQ GL W+ + + LNGILADEMGLGKTIQ IA + YL ++
Sbjct: 484 EQPSLLNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGN- 542
Query: 606 NGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQM--KASKFNVLLTTY 663
GP LI+VP ST+ NW E W P++NV+ Y GS RK ++ + K +NV++TTY
Sbjct: 543 KGPHLIVVPASTIDNWLREVNLWCPTLNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTTY 602
Query: 664 EYVIK---DKGPLAKLHWKYMIIDEGHRMKNH-HCKLTHILNTFYVAPHRLLLTGTPLQN 719
I D+ +L Y I DEGH +KN + H++ A +RLLLTGTP+QN
Sbjct: 603 NCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTIN--ARNRLLLTGTPVQN 660
Query: 720 KLPELWALLNFLLPSIFKS-VSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPF 778
L EL +LLNF++P +F S S + F++ E+ + E+E I ++ +++PF
Sbjct: 661 NLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQ-SIYEKERIAHAKQ---IIKPF 716
Query: 779 LLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXL 838
+LRR+K+EV LP K + I C MS Q+ LY + + + +
Sbjct: 717 ILRRVKEEVLKLLPPKKDQIELCAMSEKQEQLYSGLFNR-------LKKSINNLEKNTEM 769
Query: 839 MNTIVQLRKLCNHPFM 854
N ++QLRK+ NHP +
Sbjct: 770 CNVMMQLRKMANHPLL 785
Score = 353 (129.3 bits), Expect = 1.6e-76, Sum P(2) = 1.6e-76
Identities = 73/176 (41%), Positives = 112/176 (63%)
Query: 876 DLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAE 935
DL SGKF L IL +LK G RV+LF Q T +++ILE + +Y+RLDG T+
Sbjct: 846 DLILDSGKFRTLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQIS 905
Query: 936 DRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRI 995
+R L+ +FN D + F+F+LST+AGGLG+NL +A+ VI+ D D NP+ D QA+DR HR+
Sbjct: 906 ERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRV 964
Query: 996 GQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQT 1051
GQ EV V++L++ ++EE +L + KL +++ + D+ S ++ L+T
Sbjct: 965 GQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEADEGSMPADIATLLKT 1020
>UNIPROTKB|F6VDE0 [details] [associations]
symbol:SMARCA2 "Probable global transcription activator
SNF2L2" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0071564 "npBAF complex"
evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR014978 Pfam:PF08880 SMART:SM00951
GO:GO:0005524 GO:GO:0005634 GO:GO:0008285 GO:GO:0006355
GO:GO:0045111 GO:GO:0071564 GO:GO:0071565 ChiTaRS:SMARCA2
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0016818
EMBL:AL359076 EMBL:AL138755 HGNC:HGNC:11098 GO:GO:0035887
IPI:IPI00640353 ProteinModelPortal:F6VDE0 Ensembl:ENST00000450198
ArrayExpress:F6VDE0 Bgee:F6VDE0 Uniprot:F6VDE0
Length = 559
Score = 696 (250.1 bits), Expect = 1.9e-76, Sum P(2) = 1.9e-76
Identities = 138/221 (62%), Positives = 169/221 (76%)
Query: 182 QIKQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIEL 241
Q KQS+++ I KP+GLDP+ ILQERE R+ I RI+EL +L +LP LR KA +EL
Sbjct: 322 QQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELE-NLPGSLPPDLRTKATVEL 380
Query: 242 RALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEA 301
+AL++LNFQRQLR EV+AC RRDTTLETA+N KAYKR+KRQ L+EAR TEKLEKQQK+E
Sbjct: 381 KALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQ 440
Query: 302 ERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXXX 361
ERK+RQKHQEY+ ++LQH KDFKEYHR+ +I +L+KAV +HAN
Sbjct: 441 ERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEK 500
Query: 362 XXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLT 402
LMAEDEEGYRKLIDQKKD+RLA+LL QTDEY++NLT
Sbjct: 501 ERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLT 541
Score = 106 (42.4 bits), Expect = 1.9e-76, Sum P(2) = 1.9e-76
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 92 FTSAQVQQLRFQIMAYRLLARNQPLTPQLAMGVQGKR 128
F+ Q+ QLR QI+AY++LAR QPL L + VQGKR
Sbjct: 174 FSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKR 210
Score = 55 (24.4 bits), Expect = 4.5e-71, Sum P(2) = 4.5e-71
Identities = 23/92 (25%), Positives = 34/92 (36%)
Query: 50 PQENLTALQRAIDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQQLRFQIMAYRL 109
PQE + + + ID + ++G+ ED MK H + Y +
Sbjct: 66 PQEGMHQMHKPIDGIHDKGIVEDIHCGS---MKGTGMRPPHPGMGPPQSPMDQHSQGY-M 121
Query: 110 LARNQPL-TPQLAMGVQGKRMEGVPSGPQMPP 140
PL P+ V G P+ PQMPP
Sbjct: 122 SPHPSPLGAPE---HVSSPMSGGGPTPPQMPP 150
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 630 (226.8 bits), Expect = 2.0e-76, Sum P(3) = 2.0e-76
Identities = 146/391 (37%), Positives = 229/391 (58%)
Query: 746 FNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSG 805
FN A T E E+++E+ I +LH +L P +LRRLK +V + +P K E I++ ++S
Sbjct: 800 FNQLEAFTAEFNEISKEDQI---EKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSA 856
Query: 806 LQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDH 865
+QK Y K IL + LMN +++L+K CNHP++F E +
Sbjct: 857 MQKKWY-----KNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYLFVKAELEAPKE 911
Query: 866 VGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKY 925
+G+ G L + SGKF LL ++L KLK GHRVL+F QMT++++I+ED Y G++Y
Sbjct: 912 K--NGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRY 969
Query: 926 MRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQD 985
R+DG+ + R D + ++NAP ++ FIF+LSTRAGGLG+NL TADTVII+DSDWNPH D
Sbjct: 970 ERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHND 1029
Query: 986 LQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSER 1045
+QA RAHR+GQK++V + R +T SVEE+I + A+ K+ ++ V++AG+ ++ +
Sbjct: 1030 IQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAGLGGKEGKTMSK 1089
Query: 1046 HQFLQTILHQDDEE--DEEENAVPDDETVNQMLARSEEEFQTYQRIDA--ER-RKEQGKK 1100
+ L +L EE E+ +A + E + A ++E +DA +R KE+
Sbjct: 1090 TE-LDDVLRWGTEELFSEDLDAA-EGEGSEKKGAAAQEIVWDDAAVDALLDRSNKEETPA 1147
Query: 1101 SRLIEVSELPDWLIKEDEEIEQWAFEAKEEE 1131
+ E +W + + +++ KE E
Sbjct: 1148 GE--DGEEKAEWQNEYLSSFKVASYQTKETE 1176
Score = 286 (105.7 bits), Expect = 9.9e-42, Sum P(4) = 9.9e-42
Identities = 65/163 (39%), Positives = 98/163 (60%)
Query: 655 KFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTG 714
KF+VLLT+YE + DK L+ + W +++DE HR+KN+ LN Y +R+LLTG
Sbjct: 720 KFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNE-YTIHYRVLLTG 778
Query: 715 TPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 774
TPLQN L EL+ LLNFL F + F FN E+++E+ I +LH +
Sbjct: 779 TPLQNNLEELFHLLNFLSKERFNQLEAFTAEFN----------EISKEDQI---EKLHNL 825
Query: 775 LRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK 817
L P +LRRLK +V + +P K E I++ ++S +QK Y+++ T+
Sbjct: 826 LGPHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTR 868
Score = 230 (86.0 bits), Expect = 2.0e-76, Sum P(3) = 2.0e-76
Identities = 44/94 (46%), Positives = 59/94 (62%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
GKL YQ++GL W+ ++N + ILADEMGLGKT+Q++ + LM++ GPFLI P
Sbjct: 600 GKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAP 659
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ 648
LST+ NW E E+W P VV Y G R L+
Sbjct: 660 LSTIINWEREAEQWCPDFYVVTYVGLRDARVVLR 693
Score = 79 (32.9 bits), Expect = 9.9e-42, Sum P(4) = 9.9e-42
Identities = 30/106 (28%), Positives = 52/106 (49%)
Query: 1059 EDEEENAVPDDETVNQMLARSEEEFQTYQRIDAE-RRKEQGKKSRLIEVSEL-PD---WL 1113
ED EE A E N+ L S + +YQ + E + +E+ +++ +I+ E PD W
Sbjct: 1149 EDGEEKA----EWQNEYL--SSFKVASYQTKETEGQEEEEEEETEVIKEDEKEPDPDYW- 1201
Query: 1114 IKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLK 1159
E++ + +E E + +G+G R RKQ++Y +W K
Sbjct: 1202 ----EKLLKHHYEQDREIELQKLGKGKRVRKQINYASENMGTDWSK 1243
Score = 56 (24.8 bits), Expect = 2.3e-39, Sum P(4) = 2.3e-39
Identities = 41/206 (19%), Positives = 80/206 (38%)
Query: 929 DGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQA 988
DG KAE + + L F + Y T+ + +T +I + + P D
Sbjct: 1150 DGEEKAEWQNEYLSSFKV--ASY-----QTKETEGQEEEEEEETEVIKEDEKEPDPDYWE 1202
Query: 989 QDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMD---EKVIQAGMFDQKS-TGSE 1044
+ H Q E+ + +L V ++I A+ + D + Q D +S GS+
Sbjct: 1203 KLLKHHYEQDREIELQKLGKGKRVRKQINYASE-NMGTDWSKQNQTQDDDDDNESYRGSD 1261
Query: 1045 RHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRL- 1103
L + +D+ DE++ D+E + ++A+ + + +R+ G R
Sbjct: 1262 NGDGLNS---DEDDYDEKKKRRRDEEKMPPLMAKVNGQVEILGFNPRQRKAFYGAVMRWG 1318
Query: 1104 --IEVSELPDWLIKEDEEIEQWAFEA 1127
+ S WL+++ + F A
Sbjct: 1319 MPPQDSHQSQWLVRDLRNKSEKVFRA 1344
Score = 52 (23.4 bits), Expect = 6.1e-39, Sum P(4) = 6.1e-39
Identities = 22/72 (30%), Positives = 34/72 (47%)
Query: 1063 ENAVPDDETVNQMLARSEEEFQTYQRIDAERRKE-QGKKSRLIEVSELPDWLIKEDEEIE 1121
+ V DD V+ +L RS +E +T D E + E Q + +V+ + EE E
Sbjct: 1124 QEIVWDDAAVDALLDRSNKE-ETPAGEDGEEKAEWQNEYLSSFKVASYQTKETEGQEEEE 1182
Query: 1122 QWAFEA-KEEEK 1132
+ E KE+EK
Sbjct: 1183 EEETEVIKEDEK 1194
Score = 51 (23.0 bits), Expect = 2.0e-76, Sum P(3) = 2.0e-76
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 277 KRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYIT 314
K + +GL +K +K++K++ RKK + +Y+T
Sbjct: 560 KHREAKGLPPKEDEKKKKKREKIDI-RKKYEVQPDYVT 596
Score = 46 (21.3 bits), Expect = 6.8e-76, Sum P(3) = 6.8e-76
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 250 QRQLRAEVIACARRDTTLETAVNVKAYKRTKRQG-LKEARATEKLEKQQKVEAE 302
Q QL +++ + D ++ A A + K++G L+ ARA +K + ++ EAE
Sbjct: 206 QEQLEDDLVK-DKEDARIKRA----AEREEKKKGALEAARAAKKAKLEKGEEAE 254
Score = 43 (20.2 bits), Expect = 5.1e-38, Sum P(4) = 5.1e-38
Identities = 31/121 (25%), Positives = 49/121 (40%)
Query: 999 NEVRVL-RLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDD 1057
N VL R+ ++ V ++ +Y IQ + + + GS + T +
Sbjct: 1374 NRQHVLGRIGLLSLVRRKVQEFEQYNGQWSMPEIQDEVLAKAANGSAQGSSRST--PKPK 1431
Query: 1058 EEDEEENAVPDD--ETVNQML------ARSEEEFQTYQRIDAERRKEQGKKSRLIEVSEL 1109
EE +EE +D ETVN A SE+ + +D + KE K IE +E
Sbjct: 1432 EEPKEEPMEKEDATETVNGATSEPATDAESEQNAPVDEPMDTDEAKEP--KEEPIE-TEK 1488
Query: 1110 P 1110
P
Sbjct: 1489 P 1489
Score = 42 (19.8 bits), Expect = 6.5e-38, Sum P(4) = 6.5e-38
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 1055 QDDE--EDEEENAV---PDDET 1071
++DE E EEE V PDDET
Sbjct: 1750 EEDEPVEAEEEEGVKQEPDDET 1771
Score = 39 (18.8 bits), Expect = 1.3e-37, Sum P(4) = 1.3e-37
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 1098 GKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQ 1142
GK+ + + +EL D L EE+ +A E E + G +++
Sbjct: 1081 GKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQE 1125
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 630 (226.8 bits), Expect = 2.0e-76, Sum P(3) = 2.0e-76
Identities = 146/391 (37%), Positives = 229/391 (58%)
Query: 746 FNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSG 805
FN A T E E+++E+ I +LH +L P +LRRLK +V + +P K E I++ ++S
Sbjct: 800 FNQLEAFTAEFNEISKEDQI---EKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSA 856
Query: 806 LQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDH 865
+QK Y K IL + LMN +++L+K CNHP++F E +
Sbjct: 857 MQKKWY-----KNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYLFVKAELEAPKE 911
Query: 866 VGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKY 925
+G+ G L + SGKF LL ++L KLK GHRVL+F QMT++++I+ED Y G++Y
Sbjct: 912 K--NGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRY 969
Query: 926 MRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQD 985
R+DG+ + R D + ++NAP ++ FIF+LSTRAGGLG+NL TADTVII+DSDWNPH D
Sbjct: 970 ERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHND 1029
Query: 986 LQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSER 1045
+QA RAHR+GQK++V + R +T SVEE+I + A+ K+ ++ V++AG+ ++ +
Sbjct: 1030 IQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAGLGGKEGKTMSK 1089
Query: 1046 HQFLQTILHQDDEE--DEEENAVPDDETVNQMLARSEEEFQTYQRIDA--ER-RKEQGKK 1100
+ L +L EE E+ +A + E + A ++E +DA +R KE+
Sbjct: 1090 TE-LDDVLRWGTEELFSEDLDAA-EGEGSEKKGAAAQEIVWDDAAVDALLDRSNKEETPA 1147
Query: 1101 SRLIEVSELPDWLIKEDEEIEQWAFEAKEEE 1131
+ E +W + + +++ KE E
Sbjct: 1148 GE--DGEEKAEWQNEYLSSFKVASYQTKETE 1176
Score = 286 (105.7 bits), Expect = 9.9e-42, Sum P(4) = 9.9e-42
Identities = 65/163 (39%), Positives = 98/163 (60%)
Query: 655 KFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTG 714
KF+VLLT+YE + DK L+ + W +++DE HR+KN+ LN Y +R+LLTG
Sbjct: 720 KFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNE-YTIHYRVLLTG 778
Query: 715 TPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 774
TPLQN L EL+ LLNFL F + F FN E+++E+ I +LH +
Sbjct: 779 TPLQNNLEELFHLLNFLSKERFNQLEAFTAEFN----------EISKEDQI---EKLHNL 825
Query: 775 LRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK 817
L P +LRRLK +V + +P K E I++ ++S +QK Y+++ T+
Sbjct: 826 LGPHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTR 868
Score = 230 (86.0 bits), Expect = 2.0e-76, Sum P(3) = 2.0e-76
Identities = 44/94 (46%), Positives = 59/94 (62%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
GKL YQ++GL W+ ++N + ILADEMGLGKT+Q++ + LM++ GPFLI P
Sbjct: 600 GKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAP 659
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ 648
LST+ NW E E+W P VV Y G R L+
Sbjct: 660 LSTIINWEREAEQWCPDFYVVTYVGLRDARVVLR 693
Score = 79 (32.9 bits), Expect = 9.9e-42, Sum P(4) = 9.9e-42
Identities = 30/106 (28%), Positives = 52/106 (49%)
Query: 1059 EDEEENAVPDDETVNQMLARSEEEFQTYQRIDAE-RRKEQGKKSRLIEVSEL-PD---WL 1113
ED EE A E N+ L S + +YQ + E + +E+ +++ +I+ E PD W
Sbjct: 1149 EDGEEKA----EWQNEYL--SSFKVASYQTKETEGQEEEEEEETEVIKEDEKEPDPDYW- 1201
Query: 1114 IKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEWLK 1159
E++ + +E E + +G+G R RKQ++Y +W K
Sbjct: 1202 ----EKLLKHHYEQDREIELQKLGKGKRVRKQINYASENMGTDWSK 1243
Score = 56 (24.8 bits), Expect = 2.3e-39, Sum P(4) = 2.3e-39
Identities = 41/206 (19%), Positives = 80/206 (38%)
Query: 929 DGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQA 988
DG KAE + + L F + Y T+ + +T +I + + P D
Sbjct: 1150 DGEEKAEWQNEYLSSFKV--ASY-----QTKETEGQEEEEEEETEVIKEDEKEPDPDYWE 1202
Query: 989 QDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMD---EKVIQAGMFDQKS-TGSE 1044
+ H Q E+ + +L V ++I A+ + D + Q D +S GS+
Sbjct: 1203 KLLKHHYEQDREIELQKLGKGKRVRKQINYASE-NMGTDWSKQNQTQDDDDDNESYRGSD 1261
Query: 1045 RHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRL- 1103
L + +D+ DE++ D+E + ++A+ + + +R+ G R
Sbjct: 1262 NGDGLNS---DEDDYDEKKKRRRDEEKMPPLMAKVNGQVEILGFNPRQRKAFYGAVMRWG 1318
Query: 1104 --IEVSELPDWLIKEDEEIEQWAFEA 1127
+ S WL+++ + F A
Sbjct: 1319 MPPQDSHQSQWLVRDLRNKSEKVFRA 1344
Score = 52 (23.4 bits), Expect = 6.1e-39, Sum P(4) = 6.1e-39
Identities = 22/72 (30%), Positives = 34/72 (47%)
Query: 1063 ENAVPDDETVNQMLARSEEEFQTYQRIDAERRKE-QGKKSRLIEVSELPDWLIKEDEEIE 1121
+ V DD V+ +L RS +E +T D E + E Q + +V+ + EE E
Sbjct: 1124 QEIVWDDAAVDALLDRSNKE-ETPAGEDGEEKAEWQNEYLSSFKVASYQTKETEGQEEEE 1182
Query: 1122 QWAFEA-KEEEK 1132
+ E KE+EK
Sbjct: 1183 EEETEVIKEDEK 1194
Score = 51 (23.0 bits), Expect = 2.0e-76, Sum P(3) = 2.0e-76
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 277 KRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYIT 314
K + +GL +K +K++K++ RKK + +Y+T
Sbjct: 560 KHREAKGLPPKEDEKKKKKREKIDI-RKKYEVQPDYVT 596
Score = 46 (21.3 bits), Expect = 6.8e-76, Sum P(3) = 6.8e-76
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 250 QRQLRAEVIACARRDTTLETAVNVKAYKRTKRQG-LKEARATEKLEKQQKVEAE 302
Q QL +++ + D ++ A A + K++G L+ ARA +K + ++ EAE
Sbjct: 206 QEQLEDDLVK-DKEDARIKRA----AEREEKKKGALEAARAAKKAKLEKGEEAE 254
Score = 43 (20.2 bits), Expect = 5.1e-38, Sum P(4) = 5.1e-38
Identities = 31/121 (25%), Positives = 49/121 (40%)
Query: 999 NEVRVL-RLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDD 1057
N VL R+ ++ V ++ +Y IQ + + + GS + T +
Sbjct: 1374 NRQHVLGRIGLLSLVRRKVQEFEQYNGQWSMPEIQDEVLAKAANGSAQGSSRST--PKPK 1431
Query: 1058 EEDEEENAVPDD--ETVNQML------ARSEEEFQTYQRIDAERRKEQGKKSRLIEVSEL 1109
EE +EE +D ETVN A SE+ + +D + KE K IE +E
Sbjct: 1432 EEPKEEPMEKEDATETVNGATSEPATDAESEQNAPVDEPMDTDEAKEP--KEEPIE-TEK 1488
Query: 1110 P 1110
P
Sbjct: 1489 P 1489
Score = 42 (19.8 bits), Expect = 6.5e-38, Sum P(4) = 6.5e-38
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 1055 QDDE--EDEEENAV---PDDET 1071
++DE E EEE V PDDET
Sbjct: 1750 EEDEPVEAEEEEGVKQEPDDET 1771
Score = 39 (18.8 bits), Expect = 1.3e-37, Sum P(4) = 1.3e-37
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 1098 GKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQ 1142
GK+ + + +EL D L EE+ +A E E + G +++
Sbjct: 1081 GKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQE 1125
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 791 (283.5 bits), Expect = 4.9e-76, Sum P(2) = 4.9e-76
Identities = 204/602 (33%), Positives = 317/602 (52%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKT+QT + L ++ GPFL+ P
Sbjct: 734 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 793
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPLA 674
LST+ NW EFE WAP + VV Y G R ++ + N + + K
Sbjct: 794 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFTFEDNAIRGGKKASKMKKEAAV 853
Query: 675 KLH-----WKYMIIDEGHRMK-NHHCKLT---HILNTFYVAPHRLLLTGTPLQNKLPELW 725
K H ++ + ID+ + C + H L R+L PLQ+KL
Sbjct: 854 KFHVLLTSYELITIDQAILGSIDWACLVVDEAHRLKNNQSKFFRVL-NNYPLQHKLLLTG 912
Query: 726 ALLNFLLPSIFKSVSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 784
L L +F ++ + FN E ++ +E+ I ++LH +L P +LRRLK
Sbjct: 913 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADIAKEDQI---KKLHDMLGPHMLRRLK 969
Query: 785 KEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI--LLTDGSEXXXXXXXXXXXLMNTI 842
+V +P K E I++ ++S +QK Y+++ T+ L T G L+N +
Sbjct: 970 ADVFKHMPSKTELIVRVELSPMQKKYYKYILTRNFEALNTRGG-------GNQVSLLNVV 1022
Query: 843 VQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVL 902
+ L+K CNHP++F + +G+ G L + SGK LL ++L KLK GHRVL
Sbjct: 1023 MDLKKCCNHPYLFPTAATEAPKMP--NGMYDGSALTKASGKLMLLFKMLKKLKEGGHRVL 1080
Query: 903 LFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGG 962
+F QMT+++++LED+ G+KY R+DG R + + +FNAP + F+F+LSTRAGG
Sbjct: 1081 IFSQMTKMLDLLEDFLENEGYKYERIDGGVTGGMRQEAIDRFNAPGAPQFVFLLSTRAGG 1140
Query: 963 LGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARY 1022
LG+NL TADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+
Sbjct: 1141 LGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERITQVAKK 1200
Query: 1023 KLNMDEKVIQAGMFDQKSTGSERH----------QFLQTILHQDDEEDEEENAVP-DDET 1071
K+ + V++ G+ + + S++ Q + L + D ++E+ + + DD+
Sbjct: 1201 KMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEQLFKDELGEGDNKEEDSSVIHYDDKA 1260
Query: 1072 VNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIK-EDEEIEQWAFEA-KE 1129
++++L R++ DA E + + ++ +++K EDEE E E K+
Sbjct: 1261 IDRLLDRNQ---------DATEDTELQSMNEYLSSFKVAQYVVKDEDEEEEDVDREIIKQ 1311
Query: 1130 EE 1131
EE
Sbjct: 1312 EE 1313
Score = 51 (23.0 bits), Expect = 4.9e-76, Sum P(2) = 4.9e-76
Identities = 19/82 (23%), Positives = 36/82 (43%)
Query: 1076 LARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALH 1135
L+++E+ + ++ + + KE + E+ E+PD K ++ KE E +
Sbjct: 1572 LSKTEDIKELEEKTEGDGEKEVKGSRQEDEIIEIPDEGEKSPSSAKKEEKTDKESEASSE 1631
Query: 1136 MGRGSRQR-KQVDYTDSLTEKE 1156
GSR+ K + S KE
Sbjct: 1632 KDGGSRENEKDGEKEKSAESKE 1653
Score = 47 (21.6 bits), Expect = 1.3e-75, Sum P(2) = 1.3e-75
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 1081 EEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEK 1132
E+ + I K +G + ++ S D +I+ +E E+ AK+EEK
Sbjct: 1570 EDLSKTEDIKELEEKTEGDGEKEVKGSRQEDEIIEIPDEGEKSPSSAKKEEK 1621
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 585 (211.0 bits), Expect = 4.2e-75, Sum P(4) = 4.2e-75
Identities = 127/305 (41%), Positives = 185/305 (60%)
Query: 755 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHM 814
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+ +
Sbjct: 905 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFI 961
Query: 815 HTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSG 874
T+ + L+N ++ L+K CNHP++F + GS G
Sbjct: 962 LTRNFEALNSK-----GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPMLPNGS--YDG 1014
Query: 875 PDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKA 934
L + SGK LL ++L KL+ GHRVL+F QMT+++++LED+ Y G+KY R+DG
Sbjct: 1015 SSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITG 1074
Query: 935 EDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHR 994
R + + +FNAP ++ F F+LSTRAGGLG+NL TADTVII+DSDWNPH D+QA RAHR
Sbjct: 1075 GLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHR 1134
Query: 995 IGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILH 1054
IGQ +V + R +T SVEERI A+ K+ + V++ G+ KS GS Q L IL
Sbjct: 1135 IGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGL-GSKS-GSMTKQELDDILK 1192
Query: 1055 QDDEE 1059
EE
Sbjct: 1193 FGTEE 1197
Score = 299 (110.3 bits), Expect = 1.6e-43, Sum P(4) = 1.6e-43
Identities = 63/163 (38%), Positives = 102/163 (62%)
Query: 655 KFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTG 714
KF+VLLT+YE + D+ L + W +++DE HR+KN+ K +LN++ + ++LLLTG
Sbjct: 816 KFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKI-DYKLLLTG 874
Query: 715 TPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 774
TPLQN L EL+ LLNFL P F ++ F + F ++++E+ I ++LH +
Sbjct: 875 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 921
Query: 775 LRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK 817
L P +LRRLK +V +P K E I++ ++S +QK Y+ + T+
Sbjct: 922 LGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR 964
Score = 219 (82.2 bits), Expect = 4.2e-75, Sum P(4) = 4.2e-75
Identities = 42/94 (44%), Positives = 56/94 (59%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKT+QTI + L ++ GP+L+ P
Sbjct: 696 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAP 755
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ 648
LST+ NW EFE WAP VV Y G R ++
Sbjct: 756 LSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 789
Score = 100 (40.3 bits), Expect = 4.2e-75, Sum P(4) = 4.2e-75
Identities = 32/117 (27%), Positives = 61/117 (52%)
Query: 1057 DEEDEEENAVP--DDETVNQMLARSEE-----EFQTYQRIDAERRKEQGKKSRLIEVSEL 1109
D +D E+++V DD ++++L R+++ E Q + + Q V E+
Sbjct: 1243 DNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEV 1302
Query: 1110 PDWLIKEDEEIEQ--WA------FEAKEEEKALHMGRGSRQRKQVDYTDSLTE-KEW 1157
+IK++E ++ W +E ++E+ A ++G+G R RKQV+Y D+ E +EW
Sbjct: 1303 EREVIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEW 1359
Score = 51 (23.0 bits), Expect = 5.4e-70, Sum P(4) = 5.4e-70
Identities = 30/129 (23%), Positives = 55/129 (42%)
Query: 1027 DEKVIQAGMFDQKSTGSERH------QFLQTILHQDDEEDEEENAVPDDETVNQMLARSE 1080
D+ Q G D+K +G+++ Q L T L + + ED+ +++ D AR E
Sbjct: 1565 DKMEAQLGYTDEKESGTQKPKKSLEIQALPTALDRVEAEDKHQSSDSKDR------AR-E 1617
Query: 1081 EEFQTYQRIDAERRKEQGKKSRLIEVSE-LPDWL---IKEDEEIEQWAFEAKEEEKALHM 1136
E + ++ A+ EQ K + E +PD L + + +A+E+E
Sbjct: 1618 ERMEEVEK--AQGSPEQPLKEETLPDKEPVPDKLELSLSHSNDFRPDDPKAEEKEPTETQ 1675
Query: 1137 GRGSRQRKQ 1145
G R+ +
Sbjct: 1676 QNGDREEDE 1684
Score = 49 (22.3 bits), Expect = 8.8e-70, Sum P(4) = 8.8e-70
Identities = 18/83 (21%), Positives = 43/83 (51%)
Query: 1055 QDDEEDEEENAVPDDETVNQMLARSEEE-FQTYQRIDAERRKEQGKKSRLIEVSE-LPDW 1112
Q+D+E ++E + D+++ + + E+E F+ +R + + + Q ++ + + LP
Sbjct: 1354 QEDQEWQDE--LSDNQSEYSIGSEDEDEDFE--ERPEGQSGRRQSRRQLKSDRDKPLPPL 1409
Query: 1113 LIKEDEEIEQWAFEAKEEEKALH 1135
L + IE F A++ + L+
Sbjct: 1410 LARVGGNIEVLGFNARQRKAFLN 1432
Score = 46 (21.3 bits), Expect = 4.2e-75, Sum P(4) = 4.2e-75
Identities = 8/21 (38%), Positives = 18/21 (85%)
Query: 291 EKLEKQQKVEAERKKRQKHQE 311
+KL+++++ +A+RKKR + +E
Sbjct: 100 KKLKEKKEKKAKRKKRDEDEE 120
Score = 42 (19.8 bits), Expect = 1.1e-74, Sum P(4) = 1.1e-74
Identities = 11/36 (30%), Positives = 23/36 (63%)
Query: 277 KRTKRQGLKEARATEKLEKQQKVEAERK-KRQKHQE 311
++++ +G + T+K +K+ K + E+K KR+K E
Sbjct: 83 EKSESEG-SDYSPTKKKKKKLKEKKEKKAKRKKRDE 117
Score = 42 (19.8 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 679 KYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLN 729
+YMI++E + + H + N F +LL ++ +L A LN
Sbjct: 1758 RYMILNEPFKSEVHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRA-AYLN 1807
Score = 39 (18.8 bits), Expect = 2.3e-74, Sum P(4) = 2.3e-74
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 277 KRTKRQGLKEARATEKLEKQQKVEAE-------RKKRQKHQE 311
KR K++G + + + + ++K E+E +KK++K +E
Sbjct: 63 KRKKKEGSNDELSENEEDLEEKSESEGSDYSPTKKKKKKLKE 104
>RGD|1309820 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10116 "Rattus
norvegicus" [GO:0000775 "chromosome, centromeric region"
evidence=ISO] [GO:0001655 "urogenital system development"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005721 "centromeric heterochromatin"
evidence=ISO] [GO:0006306 "DNA methylation" evidence=ISO]
[GO:0006342 "chromatin silencing" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1309820
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 GO:GO:0006346
GO:GO:0046651 IPI:IPI00768565 PRIDE:F1M8B3
Ensembl:ENSRNOT00000017812 OMA:XVERVEL Uniprot:F1M8B3
Length = 494
Score = 463 (168.0 bits), Expect = 1.1e-74, Sum P(2) = 1.1e-74
Identities = 116/281 (41%), Positives = 163/281 (58%)
Query: 838 LMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKST 897
L N ++ LRK CNHP+M IE D V + +L SGKF +LDR+LP+LK
Sbjct: 216 LQNIMMLLRKCCNHPYM---IEYPI-DPVTQEFKID-EELVTNSGKFLILDRMLPELKKR 270
Query: 898 GHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLS 957
H+VL+F QMT +++IL DY R F + RLDG+ +R + FN D E F+F++S
Sbjct: 271 CHKVLVFSQMTSMLDILMDYCHLRNFTFSRLDGSMSYSEREKNIYSFNT-DPEVFLFLVS 329
Query: 958 TRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERIL 1017
TRAGGLG+NL ADTVII+DSDWNP DLQAQDR HRIGQ V V RL+T N+++++I+
Sbjct: 330 TRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIV 389
Query: 1018 AAARYKLNMDEKVIQAGMFDQKSTG-SERHQFLQT-----ILHQDDEEDEEENA---VPD 1068
A K +++ +I F +G S+ FL +L D E E + + V
Sbjct: 390 ERAAAKRKLEKLIIHKNHFKGGQSGLSQSKNFLDAKELMELLKSRDYEREVKGSREKVIS 449
Query: 1069 DETVNQMLARSEEEFQTYQRIDAERR-KEQGKKSRLIEVSE 1108
DE + +L RS+ ++ A R KE+ +++E SE
Sbjct: 450 DEDLELLLDRSD----LIDQMKASRPIKEKTGIFKILENSE 486
Score = 331 (121.6 bits), Expect = 1.1e-74, Sum P(2) = 1.1e-74
Identities = 66/150 (44%), Positives = 94/150 (62%)
Query: 677 HWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLNFLLPSIF 736
+WKY+I+DEGHR+KN C+L L F A ++LLLTGTPLQN L ELW+LLNFLLP +F
Sbjct: 3 YWKYLIVDEGHRIKNMKCRLIRELKRFN-ADNKLLLTGTPLQNNLSELWSLLNFLLPDVF 61
Query: 737 KSVSTFEQWFN-APFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKV 795
+ +FE WF+ + T E + E E ++ LH++L PFLLRRLK +V ++P K
Sbjct: 62 DDLKSFESWFDITSLSETAEDIIAKEREQN-VLHMLHQILTPFLLRRLKSDVALEVPPKR 120
Query: 796 EYIIKCDMSGLQKVLYRHMHTKGILLTDGS 825
E ++ + Q++ Y + + I GS
Sbjct: 121 EVVVYAPLCNKQEIFYTAIVNRTIANMFGS 150
Score = 41 (19.5 bits), Expect = 8.8e-27, Sum P(2) = 8.8e-27
Identities = 6/30 (20%), Positives = 16/30 (53%)
Query: 1276 GKYSSVDELQKDFKTLCRNAQIYNEELSLI 1305
GK+ +D + + K C ++++ S++
Sbjct: 255 GKFLILDRMLPELKKRCHKVLVFSQMTSML 284
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 586 (211.3 bits), Expect = 1.1e-74, Sum P(4) = 1.1e-74
Identities = 127/305 (41%), Positives = 186/305 (60%)
Query: 755 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHM 814
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+ +
Sbjct: 770 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFI 826
Query: 815 HTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSG 874
T+ + L+N ++ L+K CNHP++F + V +G G
Sbjct: 827 LTRNFEALNSK-----GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP--VLPNGSYDG 879
Query: 875 PDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKA 934
L + SGK LL ++L KL+ GHRVL+F QMT+++++LED+ Y G+KY R+DG
Sbjct: 880 SSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITG 939
Query: 935 EDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHR 994
R + + +FNAP ++ F F+LSTRAGGLG+NL TADTVII+DSDWNPH D+QA RAHR
Sbjct: 940 GLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHR 999
Query: 995 IGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILH 1054
IGQ +V + R +T SVEERI A+ K+ + V++ G+ KS GS Q L IL
Sbjct: 1000 IGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGL-GSKS-GSMTKQELDDILK 1057
Query: 1055 QDDEE 1059
EE
Sbjct: 1058 FGTEE 1062
Score = 299 (110.3 bits), Expect = 5.9e-43, Sum P(4) = 5.9e-43
Identities = 63/163 (38%), Positives = 102/163 (62%)
Query: 655 KFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTG 714
KF+VLLT+YE + D+ L + W +++DE HR+KN+ K +LN++ + ++LLLTG
Sbjct: 681 KFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKI-DYKLLLTG 739
Query: 715 TPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 774
TPLQN L EL+ LLNFL P F ++ F + F ++++E+ I ++LH +
Sbjct: 740 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 786
Query: 775 LRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK 817
L P +LRRLK +V +P K E I++ ++S +QK Y+ + T+
Sbjct: 787 LGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR 829
Score = 219 (82.2 bits), Expect = 1.1e-74, Sum P(4) = 1.1e-74
Identities = 42/94 (44%), Positives = 56/94 (59%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKT+QTI + L ++ GP+L+ P
Sbjct: 561 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAP 620
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ 648
LST+ NW EFE WAP VV Y G R ++
Sbjct: 621 LSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 654
Score = 101 (40.6 bits), Expect = 1.1e-74, Sum P(4) = 1.1e-74
Identities = 32/117 (27%), Positives = 61/117 (52%)
Query: 1057 DEEDEEENAVP--DDETVNQMLARSEE-----EFQTYQRIDAERRKEQGKKSRLIEVSEL 1109
D +D E+++V DD ++++L R+++ E Q + + Q V E+
Sbjct: 1108 DNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEV 1167
Query: 1110 PDWLIKEDEEIEQ--WA------FEAKEEEKALHMGRGSRQRKQVDYTDSLTE-KEW 1157
+IK++E ++ W +E ++E+ A ++G+G R RKQV+Y D+ E +EW
Sbjct: 1168 EREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEW 1224
Score = 49 (22.3 bits), Expect = 2.9e-69, Sum P(4) = 2.9e-69
Identities = 18/83 (21%), Positives = 43/83 (51%)
Query: 1055 QDDEEDEEENAVPDDETVNQMLARSEEE-FQTYQRIDAERRKEQGKKSRLIEVSE-LPDW 1112
Q+D+E ++E + D+++ + + E+E F+ +R + + + Q ++ + + LP
Sbjct: 1219 QEDQEWQDE--LSDNQSEYSIGSEDEDEDFE--ERPEGQSGRRQSRRQLKSDRDKPLPPL 1274
Query: 1113 LIKEDEEIEQWAFEAKEEEKALH 1135
L + IE F A++ + L+
Sbjct: 1275 LARVGGNIEVLGFNARQRKAFLN 1297
Score = 42 (19.8 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 679 KYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLN 729
+YMI++E + + H + N F +LL ++ +L A LN
Sbjct: 1622 RYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRA-AYLN 1671
Score = 38 (18.4 bits), Expect = 1.1e-74, Sum P(4) = 1.1e-74
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 1246 KLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDELQKDFK 1289
+LP + LP+ +++D+ +++ I R DG D+ + + K
Sbjct: 1492 QLPKEEMLPEKEKILDK-LELSLIHSR-GDGNDFRPDDTRVEEK 1533
Score = 37 (18.1 bits), Expect = 1.0e-36, Sum P(5) = 1.0e-36
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 908 TQLMNILEDYFSYRGFKYM--RLDGTTKAEDRGDLLKKFNAPDSEYF 952
T+L N+ E S++ +Y+ DG + E +++K+ D +Y+
Sbjct: 1139 TELQNMNEYLSSFKVAQYVVREEDGVEEVER--EIIKQEENVDPDYW 1183
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 784 (281.0 bits), Expect = 1.6e-74, Sum P(2) = 1.6e-74
Identities = 206/599 (34%), Positives = 314/599 (52%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKT+QT + L ++ GPFL+ P
Sbjct: 717 GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 776
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPLA 674
LST+ NW EFE WAP + VV Y G R ++ + + N + + K
Sbjct: 777 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASV 836
Query: 675 KLH-----WKYMIIDEGHRMK-NHHCKLT---HILNTFYVAPHRLLLTGTPLQNKLPELW 725
K H ++ + ID + C + H L R+L G LQ+KL
Sbjct: 837 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVL-NGYSLQHKLLLTG 895
Query: 726 ALLNFLLPSIFKSVS--TFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 783
L L +F ++ T E++ N E ++ +E+ I ++LH +L P +LRRL
Sbjct: 896 TPLQNNLEELFHLLNFLTPERFHNLE-GFLEEFADIAKEDQI---KKLHDMLGPHMLRRL 951
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIV 843
K +V +P K E I++ ++S +QK Y+++ T+ L+N ++
Sbjct: 952 KADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNF-----EALNARGGGNQVSLLNVVM 1006
Query: 844 QLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLL 903
L+K CNHP++F + + + +G+ G L R SGK LL ++L LK GHRVL+
Sbjct: 1007 DLKKCCNHPYLFP-VAAMEAPKMP-NGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLI 1064
Query: 904 FCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGL 963
F QMT+++++LED+ + G+KY R+DG R + + +FNAP ++ F F+LSTRAGGL
Sbjct: 1065 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1124
Query: 964 GLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYK 1023
G+NL TADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K
Sbjct: 1125 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKK 1184
Query: 1024 LNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE---DEE-----ENAVPDDETVNQM 1075
+ + V++ G+ + TGS Q L IL EE DE +N +D +V
Sbjct: 1185 MMLTHLVVRPGLGSK--TGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHY 1242
Query: 1076 LARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEA---KEEE 1131
++ E + + E + QG L ++ ++++E+E E+ E K+EE
Sbjct: 1243 DDKAIERLLDRNQDETEDTELQGMNEYLSSF-KVAQYVVREEEMGEEEEVEREIIKQEE 1300
Score = 45 (20.9 bits), Expect = 1.6e-74, Sum P(2) = 1.6e-74
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 289 ATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEY 326
+T + + +K KK++K +E +T V + D ++Y
Sbjct: 328 STSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDY 365
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 784 (281.0 bits), Expect = 1.7e-74, Sum P(2) = 1.7e-74
Identities = 206/599 (34%), Positives = 314/599 (52%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKT+QT + L ++ GPFL+ P
Sbjct: 724 GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 783
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPLA 674
LST+ NW EFE WAP + VV Y G R ++ + + N + + K
Sbjct: 784 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASV 843
Query: 675 KLH-----WKYMIIDEGHRMK-NHHCKLT---HILNTFYVAPHRLLLTGTPLQNKLPELW 725
K H ++ + ID + C + H L R+L G LQ+KL
Sbjct: 844 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVL-NGYSLQHKLLLTG 902
Query: 726 ALLNFLLPSIFKSVS--TFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 783
L L +F ++ T E++ N E ++ +E+ I ++LH +L P +LRRL
Sbjct: 903 TPLQNNLEELFHLLNFLTPERFHNLE-GFLEEFADIAKEDQI---KKLHDMLGPHMLRRL 958
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIV 843
K +V +P K E I++ ++S +QK Y+++ T+ L+N ++
Sbjct: 959 KADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNF-----EALNARGGGNQVSLLNVVM 1013
Query: 844 QLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLL 903
L+K CNHP++F + + + +G+ G L R SGK LL ++L LK GHRVL+
Sbjct: 1014 DLKKCCNHPYLFP-VAAMEAPKMP-NGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLI 1071
Query: 904 FCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGL 963
F QMT+++++LED+ + G+KY R+DG R + + +FNAP ++ F F+LSTRAGGL
Sbjct: 1072 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1131
Query: 964 GLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYK 1023
G+NL TADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K
Sbjct: 1132 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKK 1191
Query: 1024 LNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE---DEE-----ENAVPDDETVNQM 1075
+ + V++ G+ + TGS Q L IL EE DE +N +D +V
Sbjct: 1192 MMLTHLVVRPGLGSK--TGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHY 1249
Query: 1076 LARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEA---KEEE 1131
++ E + + E + QG L ++ ++++E+E E+ E K+EE
Sbjct: 1250 DDKAIERLLDRNQDETEDTELQGMNEYLSSF-KVAQYVVREEEMGEEEEVEREIIKQEE 1307
Score = 45 (20.9 bits), Expect = 1.7e-74, Sum P(2) = 1.7e-74
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 289 ATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEY 326
+T + + +K KK++K +E +T V + D ++Y
Sbjct: 335 STSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDY 372
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 784 (281.0 bits), Expect = 1.7e-74, Sum P(2) = 1.7e-74
Identities = 206/599 (34%), Positives = 314/599 (52%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKT+QT + L ++ GPFL+ P
Sbjct: 724 GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 783
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPLA 674
LST+ NW EFE WAP + VV Y G R ++ + + N + + K
Sbjct: 784 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASV 843
Query: 675 KLH-----WKYMIIDEGHRMK-NHHCKLT---HILNTFYVAPHRLLLTGTPLQNKLPELW 725
K H ++ + ID + C + H L R+L G LQ+KL
Sbjct: 844 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVL-NGYSLQHKLLLTG 902
Query: 726 ALLNFLLPSIFKSVS--TFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 783
L L +F ++ T E++ N E ++ +E+ I ++LH +L P +LRRL
Sbjct: 903 TPLQNNLEELFHLLNFLTPERFHNLE-GFLEEFADIAKEDQI---KKLHDMLGPHMLRRL 958
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIV 843
K +V +P K E I++ ++S +QK Y+++ T+ L+N ++
Sbjct: 959 KADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNF-----EALNARGGGNQVSLLNVVM 1013
Query: 844 QLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLL 903
L+K CNHP++F + + + +G+ G L R SGK LL ++L LK GHRVL+
Sbjct: 1014 DLKKCCNHPYLFP-VAAMEAPKMP-NGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLI 1071
Query: 904 FCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGL 963
F QMT+++++LED+ + G+KY R+DG R + + +FNAP ++ F F+LSTRAGGL
Sbjct: 1072 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1131
Query: 964 GLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYK 1023
G+NL TADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K
Sbjct: 1132 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKK 1191
Query: 1024 LNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE---DEE-----ENAVPDDETVNQM 1075
+ + V++ G+ + TGS Q L IL EE DE +N +D +V
Sbjct: 1192 MMLTHLVVRPGLGSK--TGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHY 1249
Query: 1076 LARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEA---KEEE 1131
++ E + + E + QG L ++ ++++E+E E+ E K+EE
Sbjct: 1250 DDKAIERLLDRNQDETEDTELQGMNEYLSSF-KVAQYVVREEEMGEEEEVEREIIKQEE 1307
Score = 45 (20.9 bits), Expect = 1.7e-74, Sum P(2) = 1.7e-74
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 289 ATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEY 326
+T + + +K KK++K +E +T V + D ++Y
Sbjct: 335 STSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDY 372
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 784 (281.0 bits), Expect = 1.7e-74, Sum P(2) = 1.7e-74
Identities = 206/599 (34%), Positives = 314/599 (52%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKT+QT + L ++ GPFL+ P
Sbjct: 744 GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 803
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPLA 674
LST+ NW EFE WAP + VV Y G R ++ + + N + + K
Sbjct: 804 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASV 863
Query: 675 KLH-----WKYMIIDEGHRMK-NHHCKLT---HILNTFYVAPHRLLLTGTPLQNKLPELW 725
K H ++ + ID + C + H L R+L G LQ+KL
Sbjct: 864 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVL-NGYSLQHKLLLTG 922
Query: 726 ALLNFLLPSIFKSVS--TFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 783
L L +F ++ T E++ N E ++ +E+ I ++LH +L P +LRRL
Sbjct: 923 TPLQNNLEELFHLLNFLTPERFHNLE-GFLEEFADIAKEDQI---KKLHDMLGPHMLRRL 978
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIV 843
K +V +P K E I++ ++S +QK Y+++ T+ L+N ++
Sbjct: 979 KADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNF-----EALNARGGGNQVSLLNVVM 1033
Query: 844 QLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLL 903
L+K CNHP++F + + + +G+ G L R SGK LL ++L LK GHRVL+
Sbjct: 1034 DLKKCCNHPYLFP-VAAMEAPKMP-NGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLI 1091
Query: 904 FCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGL 963
F QMT+++++LED+ + G+KY R+DG R + + +FNAP ++ F F+LSTRAGGL
Sbjct: 1092 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1151
Query: 964 GLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYK 1023
G+NL TADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K
Sbjct: 1152 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKK 1211
Query: 1024 LNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE---DEE-----ENAVPDDETVNQM 1075
+ + V++ G+ + TGS Q L IL EE DE +N +D +V
Sbjct: 1212 MMLTHLVVRPGLGSK--TGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHY 1269
Query: 1076 LARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEA---KEEE 1131
++ E + + E + QG L ++ ++++E+E E+ E K+EE
Sbjct: 1270 DDKAIERLLDRNQDETEDTELQGMNEYLSSF-KVAQYVVREEEMGEEEEVEREIIKQEE 1327
Score = 45 (20.9 bits), Expect = 1.7e-74, Sum P(2) = 1.7e-74
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 289 ATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEY 326
+T + + +K KK++K +E +T V + D ++Y
Sbjct: 355 STSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDY 392
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 586 (211.3 bits), Expect = 1.8e-74, Sum P(4) = 1.8e-74
Identities = 127/305 (41%), Positives = 186/305 (60%)
Query: 755 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHM 814
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+ +
Sbjct: 907 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFI 963
Query: 815 HTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSG 874
T+ + L+N ++ L+K CNHP++F + V +G G
Sbjct: 964 LTRNFEALNSK-----GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP--VLPNGSYDG 1016
Query: 875 PDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKA 934
L + SGK LL ++L KL+ GHRVL+F QMT+++++LED+ Y G+KY R+DG
Sbjct: 1017 SSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITG 1076
Query: 935 EDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHR 994
R + + +FNAP ++ F F+LSTRAGGLG+NL TADTVII+DSDWNPH D+QA RAHR
Sbjct: 1077 GLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHR 1136
Query: 995 IGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILH 1054
IGQ +V + R +T SVEERI A+ K+ + V++ G+ KS GS Q L IL
Sbjct: 1137 IGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGL-GSKS-GSMTKQELDDILK 1194
Query: 1055 QDDEE 1059
EE
Sbjct: 1195 FGTEE 1199
Score = 299 (110.3 bits), Expect = 8.6e-43, Sum P(4) = 8.6e-43
Identities = 63/163 (38%), Positives = 102/163 (62%)
Query: 655 KFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTG 714
KF+VLLT+YE + D+ L + W +++DE HR+KN+ K +LN++ + ++LLLTG
Sbjct: 818 KFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKI-DYKLLLTG 876
Query: 715 TPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 774
TPLQN L EL+ LLNFL P F ++ F + F ++++E+ I ++LH +
Sbjct: 877 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 923
Query: 775 LRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK 817
L P +LRRLK +V +P K E I++ ++S +QK Y+ + T+
Sbjct: 924 LGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR 966
Score = 219 (82.2 bits), Expect = 1.8e-74, Sum P(4) = 1.8e-74
Identities = 42/94 (44%), Positives = 56/94 (59%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKT+QTI + L ++ GP+L+ P
Sbjct: 698 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAP 757
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ 648
LST+ NW EFE WAP VV Y G R ++
Sbjct: 758 LSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 791
Score = 101 (40.6 bits), Expect = 1.8e-74, Sum P(4) = 1.8e-74
Identities = 32/117 (27%), Positives = 61/117 (52%)
Query: 1057 DEEDEEENAVP--DDETVNQMLARSEE-----EFQTYQRIDAERRKEQGKKSRLIEVSEL 1109
D +D E+++V DD ++++L R+++ E Q + + Q V E+
Sbjct: 1245 DNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEV 1304
Query: 1110 PDWLIKEDEEIEQ--WA------FEAKEEEKALHMGRGSRQRKQVDYTDSLTE-KEW 1157
+IK++E ++ W +E ++E+ A ++G+G R RKQV+Y D+ E +EW
Sbjct: 1305 EREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEW 1361
Score = 49 (22.3 bits), Expect = 4.8e-69, Sum P(4) = 4.8e-69
Identities = 18/83 (21%), Positives = 43/83 (51%)
Query: 1055 QDDEEDEEENAVPDDETVNQMLARSEEE-FQTYQRIDAERRKEQGKKSRLIEVSE-LPDW 1112
Q+D+E ++E + D+++ + + E+E F+ +R + + + Q ++ + + LP
Sbjct: 1356 QEDQEWQDE--LSDNQSEYSIGSEDEDEDFE--ERPEGQSGRRQSRRQLKSDRDKPLPPL 1411
Query: 1113 LIKEDEEIEQWAFEAKEEEKALH 1135
L + IE F A++ + L+
Sbjct: 1412 LARVGGNIEVLGFNARQRKAFLN 1434
Score = 48 (22.0 bits), Expect = 6.1e-69, Sum P(4) = 6.1e-69
Identities = 22/112 (19%), Positives = 48/112 (42%)
Query: 1027 DEKVIQAGMFDQKSTGSERH------QFLQTILHQDDEEDEEENAVPDDETVNQMLARSE 1080
D+ Q G D+K G+++ Q L L + + ED+ E+ + + +E
Sbjct: 1567 DKMEAQLGYMDEKDPGAQKPRQPLEVQALPAALDRVESEDKHESPASKERAREERPEETE 1626
Query: 1081 EEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEK 1132
+ + +++ R + +K ++++ EL + + E + K EEK
Sbjct: 1627 KAPPSPEQLP--REEVLPEKEKILDKLEL-SLIHSRGDSSELRPDDTKAEEK 1675
Score = 42 (19.8 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 679 KYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLN 729
+YMI++E + + H + N F +LL ++ +L A LN
Sbjct: 1764 RYMILNEPFKSEVHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRA-AYLN 1813
Score = 38 (18.4 bits), Expect = 1.8e-74, Sum P(4) = 1.8e-74
Identities = 6/21 (28%), Positives = 17/21 (80%)
Query: 291 EKLEKQQKVEAERKKRQKHQE 311
+KL+ +++ +A+RKK+ + ++
Sbjct: 101 KKLKDKKEKKAKRKKKDEDED 121
Score = 37 (18.1 bits), Expect = 2.3e-74, Sum P(4) = 2.3e-74
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 277 KRTKRQGLKEARATEKLEKQQKVEAE 302
KR K++G + + + + ++K E+E
Sbjct: 64 KRKKKEGSNDELSENEEDLEEKSESE 89
Score = 37 (18.1 bits), Expect = 8.5e-68, Sum P(4) = 8.5e-68
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 1041 TGSERHQFLQTILHQDDEEDEE 1062
T +E + ++T + D EED+E
Sbjct: 1670 TKAEEKEPIETQQNGDKEEDDE 1691
Score = 37 (18.1 bits), Expect = 1.7e-36, Sum P(5) = 1.7e-36
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 908 TQLMNILEDYFSYRGFKYM--RLDGTTKAEDRGDLLKKFNAPDSEYF 952
T+L N+ E S++ +Y+ DG + E +++K+ D +Y+
Sbjct: 1276 TELQNMNEYLSSFKVAQYVVREEDGVEEVER--EIIKQEENVDPDYW 1320
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 586 (211.3 bits), Expect = 1.9e-74, Sum P(5) = 1.9e-74
Identities = 127/305 (41%), Positives = 186/305 (60%)
Query: 755 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHM 814
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+ +
Sbjct: 839 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFI 895
Query: 815 HTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSG 874
T+ + L+N ++ L+K CNHP++F + V +G G
Sbjct: 896 LTRNFEALNSK-----GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP--VLPNGSYDG 948
Query: 875 PDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKA 934
L + SGK LL ++L KL+ GHRVL+F QMT+++++LED+ Y G+KY R+DG
Sbjct: 949 SSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITG 1008
Query: 935 EDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHR 994
R + + +FNAP ++ F F+LSTRAGGLG+NL TADTVII+DSDWNPH D+QA RAHR
Sbjct: 1009 GLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHR 1068
Query: 995 IGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILH 1054
IGQ +V + R +T SVEERI A+ K+ + V++ G+ KS GS Q L IL
Sbjct: 1069 IGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGL-GSKS-GSMTKQELDDILK 1126
Query: 1055 QDDEE 1059
EE
Sbjct: 1127 FGTEE 1131
Score = 299 (110.3 bits), Expect = 2.4e-42, Sum P(5) = 2.4e-42
Identities = 63/163 (38%), Positives = 102/163 (62%)
Query: 655 KFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTG 714
KF+VLLT+YE + D+ L + W +++DE HR+KN+ K +LN++ + ++LLLTG
Sbjct: 750 KFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKI-DYKLLLTG 808
Query: 715 TPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 774
TPLQN L EL+ LLNFL P F ++ F + F ++++E+ I ++LH +
Sbjct: 809 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 855
Query: 775 LRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK 817
L P +LRRLK +V +P K E I++ ++S +QK Y+ + T+
Sbjct: 856 LGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR 898
Score = 219 (82.2 bits), Expect = 1.9e-74, Sum P(5) = 1.9e-74
Identities = 42/94 (44%), Positives = 56/94 (59%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKT+QTI + L ++ GP+L+ P
Sbjct: 630 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAP 689
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ 648
LST+ NW EFE WAP VV Y G R ++
Sbjct: 690 LSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 723
Score = 101 (40.6 bits), Expect = 1.9e-74, Sum P(5) = 1.9e-74
Identities = 32/117 (27%), Positives = 61/117 (52%)
Query: 1057 DEEDEEENAVP--DDETVNQMLARSEE-----EFQTYQRIDAERRKEQGKKSRLIEVSEL 1109
D +D E+++V DD ++++L R+++ E Q + + Q V E+
Sbjct: 1177 DNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEV 1236
Query: 1110 PDWLIKEDEEIEQ--WA------FEAKEEEKALHMGRGSRQRKQVDYTDSLTE-KEW 1157
+IK++E ++ W +E ++E+ A ++G+G R RKQV+Y D+ E +EW
Sbjct: 1237 EREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEW 1293
Score = 49 (22.3 bits), Expect = 5.3e-69, Sum P(5) = 5.3e-69
Identities = 18/83 (21%), Positives = 43/83 (51%)
Query: 1055 QDDEEDEEENAVPDDETVNQMLARSEEE-FQTYQRIDAERRKEQGKKSRLIEVSE-LPDW 1112
Q+D+E ++E + D+++ + + E+E F+ +R + + + Q ++ + + LP
Sbjct: 1288 QEDQEWQDE--LSDNQSEYSIGSEDEDEDFE--ERPEGQSGRRQSRRQLKSDRDKPLPPL 1343
Query: 1113 LIKEDEEIEQWAFEAKEEEKALH 1135
L + IE F A++ + L+
Sbjct: 1344 LARVGGNIEVLGFNARQRKAFLN 1366
Score = 45 (20.9 bits), Expect = 5.2e-69, Sum P(4) = 5.2e-69
Identities = 22/87 (25%), Positives = 39/87 (44%)
Query: 1027 DEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSE--EEFQ 1084
D+ Q G D+K G ++ + I D E E+++ D + AR E EE +
Sbjct: 1499 DKLEAQLGYMDEKEPGVQKPKKPPEIQALDGVEGEDKHESSDGKE----RAREERLEEAE 1554
Query: 1085 TYQRIDAERRKEQ--GKKSRLIEVSEL 1109
Q + KE+ +K ++++ EL
Sbjct: 1555 KAQPSPEQLPKEEVLPEKEKILDKLEL 1581
Score = 42 (19.8 bits), Expect = 1.1e-68, Sum P(4) = 1.1e-68
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 1036 FDQKSTGSERHQFLQTILHQDDEEDEE 1062
F T +E + ++T + D EEDEE
Sbjct: 1593 FRPDDTKAEEKEPIETQQNGDKEEDEE 1619
Score = 39 (18.8 bits), Expect = 1.9e-74, Sum P(5) = 1.9e-74
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 1246 KLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDELQKDFK 1289
+LP + LP+ +++D+ +++ I R DG D+ + + K
Sbjct: 1562 QLPKEEVLPEKEKILDK-LELSLIHSR-GDGSDFRPDDTKAEEK 1603
Score = 38 (18.4 bits), Expect = 1.9e-74, Sum P(5) = 1.9e-74
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 62 DSMKEQGLEEDPRYQKLIE 80
DS E+ +DP Y K+ E
Sbjct: 494 DSKSEKRKNKDPLYAKMEE 512
Score = 37 (18.1 bits), Expect = 2.0e-36, Sum P(6) = 2.0e-36
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 908 TQLMNILEDYFSYRGFKYM--RLDGTTKAEDRGDLLKKFNAPDSEYF 952
T+L N+ E S++ +Y+ DG + E +++K+ D +Y+
Sbjct: 1208 TELQNMNEYLSSFKVAQYVVREEDGVEEVER--EIIKQEENVDPDYW 1252
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 784 (281.0 bits), Expect = 2.2e-74, Sum P(3) = 2.2e-74
Identities = 206/599 (34%), Positives = 314/599 (52%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKT+QT + L ++ GPFL+ P
Sbjct: 717 GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 776
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPLA 674
LST+ NW EFE WAP + VV Y G R ++ + + N + + K
Sbjct: 777 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASV 836
Query: 675 KLH-----WKYMIIDEGHRMK-NHHCKLT---HILNTFYVAPHRLLLTGTPLQNKLPELW 725
K H ++ + ID + C + H L R+L G LQ+KL
Sbjct: 837 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVL-NGYSLQHKLLLTG 895
Query: 726 ALLNFLLPSIFKSVS--TFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 783
L L +F ++ T E++ N E ++ +E+ I ++LH +L P +LRRL
Sbjct: 896 TPLQNNLEELFHLLNFLTPERFHNLE-GFLEEFADIAKEDQI---KKLHDMLGPHMLRRL 951
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIV 843
K +V +P K E I++ ++S +QK Y+++ T+ L+N ++
Sbjct: 952 KADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNF-----EALNARGGGNQVSLLNVVM 1006
Query: 844 QLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLL 903
L+K CNHP++F + + + +G+ G L R SGK LL ++L LK GHRVL+
Sbjct: 1007 DLKKCCNHPYLFP-VAAMEAPKMP-NGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLI 1064
Query: 904 FCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGL 963
F QMT+++++LED+ + G+KY R+DG R + + +FNAP ++ F F+LSTRAGGL
Sbjct: 1065 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1124
Query: 964 GLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYK 1023
G+NL TADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K
Sbjct: 1125 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKK 1184
Query: 1024 LNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE---DEE-----ENAVPDDETVNQM 1075
+ + V++ G+ + TGS Q L IL EE DE +N +D +V
Sbjct: 1185 MMLTHLVVRPGLGSK--TGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHY 1242
Query: 1076 LARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEA---KEEE 1131
++ E + + E + QG L ++ ++++E+E E+ E K+EE
Sbjct: 1243 DDKAIERLLDRNQDETEDTELQGMNEYLSSF-KVAQYVVREEEMGEEEEVEREIIKQEE 1300
Score = 45 (20.9 bits), Expect = 2.2e-74, Sum P(3) = 2.2e-74
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 289 ATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEY 326
+T + + +K KK++K +E +T V + D ++Y
Sbjct: 328 STSRSSRSRKKLRTAKKKKKGEEEVTAVDGYETDHQDY 365
Score = 41 (19.5 bits), Expect = 2.2e-74, Sum P(3) = 2.2e-74
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 1092 ERRKEQGKKSRLIEVSELPDWLIKEDEE 1119
E+++E+ KK L++ E P L E ++
Sbjct: 1665 EKKEEEEKKEVLLQNGETPKDLSDEKQK 1692
Score = 38 (18.4 bits), Expect = 1.2e-73, Sum P(3) = 1.2e-73
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 264 DTTLET-AVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEY 312
D ++ + +V+ + R+ R K A +K + +++V A HQ+Y
Sbjct: 316 DASINSYSVSDGSTSRSSRSRKKLRTAKKKKKGEEEVTAVDGYETDHQDY 365
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 784 (281.0 bits), Expect = 2.4e-74, Sum P(3) = 2.4e-74
Identities = 206/599 (34%), Positives = 314/599 (52%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKT+QT + L ++ GPFL+ P
Sbjct: 745 GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 804
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPLA 674
LST+ NW EFE WAP + VV Y G R ++ + + N + + K
Sbjct: 805 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASV 864
Query: 675 KLH-----WKYMIIDEGHRMK-NHHCKLT---HILNTFYVAPHRLLLTGTPLQNKLPELW 725
K H ++ + ID + C + H L R+L G LQ+KL
Sbjct: 865 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVL-NGYSLQHKLLLTG 923
Query: 726 ALLNFLLPSIFKSVS--TFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 783
L L +F ++ T E++ N E ++ +E+ I ++LH +L P +LRRL
Sbjct: 924 TPLQNNLEELFHLLNFLTPERFHNLE-GFLEEFADIAKEDQI---KKLHDMLGPHMLRRL 979
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIV 843
K +V +P K E I++ ++S +QK Y+++ T+ L+N ++
Sbjct: 980 KADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNF-----EALNARGGGNQVSLLNVVM 1034
Query: 844 QLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLL 903
L+K CNHP++F + + + +G+ G L R SGK LL ++L LK GHRVL+
Sbjct: 1035 DLKKCCNHPYLFP-VAAMEAPKMP-NGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLI 1092
Query: 904 FCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGL 963
F QMT+++++LED+ + G+KY R+DG R + + +FNAP ++ F F+LSTRAGGL
Sbjct: 1093 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1152
Query: 964 GLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYK 1023
G+NL TADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K
Sbjct: 1153 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKK 1212
Query: 1024 LNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE---DEE-----ENAVPDDETVNQM 1075
+ + V++ G+ + TGS Q L IL EE DE +N +D +V
Sbjct: 1213 MMLTHLVVRPGLGSK--TGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHY 1270
Query: 1076 LARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEA---KEEE 1131
++ E + + E + QG L ++ ++++E+E E+ E K+EE
Sbjct: 1271 DDKAIERLLDRNQDETEDTELQGMNEYLSSF-KVAQYVVREEEMGEEEEVEREIIKQEE 1328
Score = 45 (20.9 bits), Expect = 2.4e-74, Sum P(3) = 2.4e-74
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 289 ATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEY 326
+T + + +K KK++K +E +T V + D ++Y
Sbjct: 356 STSRSSRSRKKLRTAKKKKKGEEEVTAVDGYETDHQDY 393
Score = 41 (19.5 bits), Expect = 2.4e-74, Sum P(3) = 2.4e-74
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 1092 ERRKEQGKKSRLIEVSELPDWLIKEDEE 1119
E+++E+ KK L++ E P L E ++
Sbjct: 1699 EKKEEEEKKEVLLQNGETPKDLSDEKQK 1726
Score = 38 (18.4 bits), Expect = 1.3e-73, Sum P(3) = 1.3e-73
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 264 DTTLET-AVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEY 312
D ++ + +V+ + R+ R K A +K + +++V A HQ+Y
Sbjct: 344 DASINSYSVSDGSTSRSSRSRKKLRTAKKKKKGEEEVTAVDGYETDHQDY 393
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 784 (281.0 bits), Expect = 3.5e-74, Sum P(3) = 3.5e-74
Identities = 206/599 (34%), Positives = 314/599 (52%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKT+QT + L ++ GPFL+ P
Sbjct: 717 GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 776
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPLA 674
LST+ NW EFE WAP + VV Y G R ++ + + N + + K
Sbjct: 777 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASV 836
Query: 675 KLH-----WKYMIIDEGHRMK-NHHCKLT---HILNTFYVAPHRLLLTGTPLQNKLPELW 725
K H ++ + ID + C + H L R+L G LQ+KL
Sbjct: 837 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVL-NGYSLQHKLLLTG 895
Query: 726 ALLNFLLPSIFKSVS--TFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 783
L L +F ++ T E++ N E ++ +E+ I ++LH +L P +LRRL
Sbjct: 896 TPLQNNLEELFHLLNFLTPERFHNLE-GFLEEFADIAKEDQI---KKLHDMLGPHMLRRL 951
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIV 843
K +V +P K E I++ ++S +QK Y+++ T+ L+N ++
Sbjct: 952 KADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNF-----EALNARGGGNQVSLLNVVM 1006
Query: 844 QLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLL 903
L+K CNHP++F + + + +G+ G L R SGK LL ++L LK GHRVL+
Sbjct: 1007 DLKKCCNHPYLFP-VAAMEAPKMP-NGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLI 1064
Query: 904 FCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGL 963
F QMT+++++LED+ + G+KY R+DG R + + +FNAP ++ F F+LSTRAGGL
Sbjct: 1065 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1124
Query: 964 GLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYK 1023
G+NL TADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K
Sbjct: 1125 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKK 1184
Query: 1024 LNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE---DEE-----ENAVPDDETVNQM 1075
+ + V++ G+ + TGS Q L IL EE DE +N +D +V
Sbjct: 1185 MMLTHLVVRPGLGSK--TGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHY 1242
Query: 1076 LARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEA---KEEE 1131
++ E + + E + QG L ++ ++++E+E E+ E K+EE
Sbjct: 1243 DDKAIERLLDRNQDETEDTELQGMNEYLSSF-KVAQYVVREEEMGEEEEVEREIIKQEE 1300
Score = 45 (20.9 bits), Expect = 3.5e-74, Sum P(3) = 3.5e-74
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 289 ATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEY 326
+T + + +K KK++K +E +T V + D ++Y
Sbjct: 328 STSRSSRSRKKLRTAKKKKKGEEEVTAVDGYETDHQDY 365
Score = 39 (18.8 bits), Expect = 3.5e-74, Sum P(3) = 3.5e-74
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 1092 ERRKEQGKKSRLIEVSELPDWLIKEDEE 1119
E+++E+ KK +++ E P L E ++
Sbjct: 1665 EKKEEEEKKDVMLQNGETPKDLSDEKQK 1692
Score = 38 (18.4 bits), Expect = 1.9e-73, Sum P(3) = 1.9e-73
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 264 DTTLET-AVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEY 312
D ++ + +V+ + R+ R K A +K + +++V A HQ+Y
Sbjct: 316 DASINSYSVSDGSTSRSSRSRKKLRTAKKKKKGEEEVTAVDGYETDHQDY 365
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 784 (281.0 bits), Expect = 4.4e-74, Sum P(3) = 4.4e-74
Identities = 206/599 (34%), Positives = 314/599 (52%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKT+QT + L ++ GPFL+ P
Sbjct: 724 GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 783
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPLA 674
LST+ NW EFE WAP + VV Y G R ++ + + N + + K
Sbjct: 784 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASV 843
Query: 675 KLH-----WKYMIIDEGHRMK-NHHCKLT---HILNTFYVAPHRLLLTGTPLQNKLPELW 725
K H ++ + ID + C + H L R+L G LQ+KL
Sbjct: 844 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVL-NGYSLQHKLLLTG 902
Query: 726 ALLNFLLPSIFKSVS--TFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 783
L L +F ++ T E++ N E ++ +E+ I ++LH +L P +LRRL
Sbjct: 903 TPLQNNLEELFHLLNFLTPERFHNLE-GFLEEFADIAKEDQI---KKLHDMLGPHMLRRL 958
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIV 843
K +V +P K E I++ ++S +QK Y+++ T+ L+N ++
Sbjct: 959 KADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNF-----EALNARGGGNQVSLLNVVM 1013
Query: 844 QLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLL 903
L+K CNHP++F + + + +G+ G L R SGK LL ++L LK GHRVL+
Sbjct: 1014 DLKKCCNHPYLFP-VAAMEAPKMP-NGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLI 1071
Query: 904 FCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGL 963
F QMT+++++LED+ + G+KY R+DG R + + +FNAP ++ F F+LSTRAGGL
Sbjct: 1072 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1131
Query: 964 GLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYK 1023
G+NL TADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K
Sbjct: 1132 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKK 1191
Query: 1024 LNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE---DEE-----ENAVPDDETVNQM 1075
+ + V++ G+ + TGS Q L IL EE DE +N +D +V
Sbjct: 1192 MMLTHLVVRPGLGSK--TGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHY 1249
Query: 1076 LARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEA---KEEE 1131
++ E + + E + QG L ++ ++++E+E E+ E K+EE
Sbjct: 1250 DDKAIERLLDRNQDETEDTELQGMNEYLSSF-KVAQYVVREEEMGEEEEVEREIIKQEE 1307
Score = 45 (20.9 bits), Expect = 4.4e-74, Sum P(3) = 4.4e-74
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 289 ATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEY 326
+T + + +K KK++K +E +T V + D ++Y
Sbjct: 335 STSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDY 372
Score = 38 (18.4 bits), Expect = 4.4e-74, Sum P(3) = 4.4e-74
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 1092 ERRKEQGKKSRLIEVSELPDWLIKEDEE 1119
E+++E+ KK +++ E P L E ++
Sbjct: 1662 EKKEEEEKKEVMLQNGETPKDLNDEKQK 1689
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 784 (281.0 bits), Expect = 4.8e-74, Sum P(3) = 4.8e-74
Identities = 206/599 (34%), Positives = 314/599 (52%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKT+QT + L ++ GPFL+ P
Sbjct: 746 GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 805
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPLA 674
LST+ NW EFE WAP + VV Y G R ++ + + N + + K
Sbjct: 806 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASV 865
Query: 675 KLH-----WKYMIIDEGHRMK-NHHCKLT---HILNTFYVAPHRLLLTGTPLQNKLPELW 725
K H ++ + ID + C + H L R+L G LQ+KL
Sbjct: 866 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVL-NGYSLQHKLLLTG 924
Query: 726 ALLNFLLPSIFKSVS--TFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 783
L L +F ++ T E++ N E ++ +E+ I ++LH +L P +LRRL
Sbjct: 925 TPLQNNLEELFHLLNFLTPERFHNLE-GFLEEFADIAKEDQI---KKLHDMLGPHMLRRL 980
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIV 843
K +V +P K E I++ ++S +QK Y+++ T+ L+N ++
Sbjct: 981 KADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNF-----EALNARGGGNQVSLLNVVM 1035
Query: 844 QLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLL 903
L+K CNHP++F + + + +G+ G L R SGK LL ++L LK GHRVL+
Sbjct: 1036 DLKKCCNHPYLFP-VAAMEAPKMP-NGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLI 1093
Query: 904 FCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGL 963
F QMT+++++LED+ + G+KY R+DG R + + +FNAP ++ F F+LSTRAGGL
Sbjct: 1094 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1153
Query: 964 GLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYK 1023
G+NL TADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K
Sbjct: 1154 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKK 1213
Query: 1024 LNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE---DEE-----ENAVPDDETVNQM 1075
+ + V++ G+ + TGS Q L IL EE DE +N +D +V
Sbjct: 1214 MMLTHLVVRPGLGSK--TGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHY 1271
Query: 1076 LARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEA---KEEE 1131
++ E + + E + QG L ++ ++++E+E E+ E K+EE
Sbjct: 1272 DDKAIERLLDRNQDETEDTELQGMNEYLSSF-KVAQYVVREEEMGEEEEVEREIIKQEE 1329
Score = 45 (20.9 bits), Expect = 4.8e-74, Sum P(3) = 4.8e-74
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 289 ATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEY 326
+T + + +K KK++K +E +T V + D ++Y
Sbjct: 357 STSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDY 394
Score = 38 (18.4 bits), Expect = 4.8e-74, Sum P(3) = 4.8e-74
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 1092 ERRKEQGKKSRLIEVSELPDWLIKEDEE 1119
E+++E+ KK +++ E P L E ++
Sbjct: 1684 EKKEEEEKKEVMLQNGETPKDLNDEKQK 1711
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 784 (281.0 bits), Expect = 5.9e-74, Sum P(2) = 5.9e-74
Identities = 201/586 (34%), Positives = 309/586 (52%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKT+QT + L ++ GPFL+ P
Sbjct: 708 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 767
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPLA 674
LST+ NW EFE WAP + VV Y G R ++ + + N + + K
Sbjct: 768 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFENNAIRGGKKPSKMKKEASV 827
Query: 675 KLH-----WKYMIIDEGHRMK-NHHCKLT---HILNTFYVAPHRLLLTGTPLQNKLPELW 725
K H ++ + ID + C + H L R+L PLQ+KL
Sbjct: 828 KFHVLLTSYELITIDTAVLGSIDWACLVVDEAHRLKNNQSKFFRIL-NNYPLQHKLLLTG 886
Query: 726 ALLNFLLPSIFKSVS--TFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 783
L L +F ++ T E++ N E ++ +E+ I ++LH +L P +LRRL
Sbjct: 887 TPLQNNLEELFHLLNFLTPERFSNLE-GFLEEFADIAKEDQI---KKLHDMLGPHMLRRL 942
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI--LLTDGSEXXXXXXXXXXXLMNT 841
K +V +P K E I++ ++S +QK Y+ + T+ L T G L+N
Sbjct: 943 KADVFKHMPSKTELIVRVELSPMQKKYYKFILTRNFEALNTRGG-------GNQVSLLNV 995
Query: 842 IVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRV 901
++ L+K CNHP++F + + +G+ G L + SGK LL ++L KLK GHRV
Sbjct: 996 VMDLKKCCNHPYLFPAAAMEAAKMP--NGMYEGGGLTKSSGKLLLLQKMLRKLKEGGHRV 1053
Query: 902 LLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAG 961
L+F QMT+++++LED+ G+KY R+DG R + + +FNAP + F+F+LSTRAG
Sbjct: 1054 LIFSQMTKMLDLLEDFLENEGYKYERIDGGITGGMRQEAIDRFNAPGAPQFVFLLSTRAG 1113
Query: 962 GLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAAR 1021
GLG+NL TADTV+I+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+
Sbjct: 1114 GLGINLATADTVVIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERITQVAK 1173
Query: 1022 YKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE---DEEENAVPDDETVNQMLAR 1078
K+ + V++ G+ + TGS Q L IL EE DE E + + + ++
Sbjct: 1174 KKMMLTHLVVRPGLGSK--TGSMSKQELDDILKFGTEELFKDEGEGENKEGQEDSSVIHY 1231
Query: 1079 SEEEFQTY--QRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQ 1122
++ + DA E + + ++ +++K++EE E+
Sbjct: 1232 DDKAIDRLLDRNQDATDDTELQSMNEYLSSFKVAQYVVKDEEEAEE 1277
Score = 40 (19.1 bits), Expect = 5.9e-74, Sum P(2) = 5.9e-74
Identities = 19/100 (19%), Positives = 35/100 (35%)
Query: 1060 DEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEE 1119
D + N D A + + + + D E+ + K S +I V + EE
Sbjct: 1533 DTQPNTPAPDGVPKAEDAGKDADKEKVKNGDGEKEANENKNSEVIAVPDEDGRAASASEE 1592
Query: 1120 IEQWAFEAK---EEEKALHMGRGSRQRKQVDYTDSLTEKE 1156
E+ E + E G ++ K+ + S +E
Sbjct: 1593 KEKGKEEKEKTPESSSEAEKADGKQEEKEEENAKSGDSEE 1632
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 768 (275.4 bits), Expect = 3.5e-73, Sum P(3) = 3.5e-73
Identities = 193/533 (36%), Positives = 285/533 (53%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLM-EKKKVNGPFLIIV 613
G L YQ++GL W+ + + ILADEMGLGKT+QTI + L E+ GP+L+
Sbjct: 629 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEQGHSKGPYLVSA 688
Query: 614 PLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPL 673
PLST+ NW EFE WAP VV Y G R ++ + + N + + + K
Sbjct: 689 PLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQ 748
Query: 674 AKLH-----WKYMIIDEGHRMK-NHHCKLT---HILNTFYVAPHRLLLTGTPLQNKLPEL 724
K H ++ + ID+ C + H L R+L + KL
Sbjct: 749 IKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVL-NSYKIDYKLLLT 807
Query: 725 WALLNFLLPSIFKSVSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 783
L L +F ++ + FN E ++++E+ I ++LH +L P +LRRL
Sbjct: 808 GTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRL 864
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIV 843
K +V +P K E I++ ++S +QK Y+ + T+ + L+N ++
Sbjct: 865 KADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSK-----GGGNQVSLLNIMM 919
Query: 844 QLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLL 903
L+K CNHP++F + V +G G L + SGK LL ++L KL+ GHRVL+
Sbjct: 920 DLKKCCNHPYLFPVAAVEAP--VLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVLI 977
Query: 904 FCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGL 963
F QMT+++++LED+ Y G+KY R+DG R + + +FNAP ++ F F+LSTRAGGL
Sbjct: 978 FSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGL 1037
Query: 964 GLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYK 1023
G+NL TADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K
Sbjct: 1038 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRK 1097
Query: 1024 LNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE---DEEENAVPDDETVN 1073
+ + V++ G+ KS GS Q L IL EE D+ E V D++ V+
Sbjct: 1098 MMLTHLVVRPGL-GSKS-GSMTKQELDDILKFGTEELFKDDVEGGVSDNKDVD 1148
Score = 50 (22.7 bits), Expect = 3.5e-73, Sum P(3) = 3.5e-73
Identities = 17/81 (20%), Positives = 40/81 (49%)
Query: 1055 QDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLI 1114
Q+D+E ++E + D+++ + SE+E + ++ R++ ++ + LP L
Sbjct: 1255 QEDQEWQDE--LSDNQS--EYSIGSEDEDEDFEERPEGGRRQSRRQLKSDRDKPLPPLLA 1310
Query: 1115 KEDEEIEQWAFEAKEEEKALH 1135
+ IE F A++ + L+
Sbjct: 1311 RVGGNIEVLGFNARQRKAFLN 1331
Score = 43 (20.2 bits), Expect = 3.5e-73, Sum P(3) = 3.5e-73
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 62 DSMKEQGLEEDPRYQKLIE 80
DS +E+ +DP Y K+ E
Sbjct: 493 DSQREKRKNKDPHYAKMEE 511
Score = 42 (19.8 bits), Expect = 2.4e-72, Sum P(3) = 2.4e-72
Identities = 19/78 (24%), Positives = 31/78 (39%)
Query: 1058 EEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGK----KSRLIEVSELPDWL 1113
E+ E E + E+ ++ +EE + Q + K + K EV D
Sbjct: 1533 EKVESEEYQENCESKEKLKEEKQEENEGIQEKEKALEKPESNSSPGKGEDKEVKPAEDTK 1592
Query: 1114 IKEDEEIEQWAFEAKEEE 1131
++E E+ E KEEE
Sbjct: 1593 VEEKEQSETQQNGDKEEE 1610
Score = 40 (19.1 bits), Expect = 3.9e-72, Sum P(3) = 3.9e-72
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 1055 QDDEEDEEENAVPDDETVN 1073
Q + + EEE+ DD VN
Sbjct: 1602 QQNGDKEEEDGKKDDRNVN 1620
Score = 37 (18.1 bits), Expect = 1.5e-72, Sum P(3) = 1.5e-72
Identities = 5/21 (23%), Positives = 17/21 (80%)
Query: 291 EKLEKQQKVEAERKKRQKHQE 311
+KL+++++ + +RKK+ + ++
Sbjct: 32 KKLKEKKEKKTKRKKKDEEED 52
>ZFIN|ZDB-GENE-091113-61 [details] [associations]
symbol:si:dkey-76p7.6 "si:dkey-76p7.6" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-091113-61 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 GO:GO:0035861 GeneTree:ENSGT00630000089890
EMBL:BX927385 IPI:IPI00901431 Ensembl:ENSDART00000113101
Bgee:E7F1C4 Uniprot:E7F1C4
Length = 954
Score = 494 (179.0 bits), Expect = 3.5e-73, Sum P(4) = 3.5e-73
Identities = 120/305 (39%), Positives = 178/305 (58%)
Query: 556 KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVPL 615
+LK YQ+ GL W+V L N L+GILADEMGLGKTIQ I+ + +L ++ +GP LI VP
Sbjct: 428 QLKPYQLIGLNWLVLLHQNKLSGILADEMGLGKTIQAISFLAHLYQEGN-HGPHLITVPA 486
Query: 616 STLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQM--KASKFNVLLTTYEYVI---KDK 670
STL NW E W PS V+ Y GS RK ++ ++ + ++N++++TY I D+
Sbjct: 487 STLDNWVRELNLWCPSFKVLVYYGSADDRKYMRYEILNQIVEYNIIVSTYNLAIGNSSDR 546
Query: 671 GPLAKLHWKYMIIDEGHRMKN-HHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLN 729
KL +Y + DEGH +KN + + H++ A +RLLLTGTPLQN L EL +LLN
Sbjct: 547 SLFCKLKLEYAVFDEGHLLKNMNSLRYRHLMAIN--AKYRLLLTGTPLQNNLLELMSLLN 604
Query: 730 FLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVES 789
F++P++F S ST + F+ + + + E + +L +++PF+LRR+K EV
Sbjct: 605 FIMPNMFSS-STSQ--IAKMFSMKSSEEQSSFERDRITHAKL--IMKPFILRRVKSEVLK 659
Query: 790 QLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLC 849
QLP K E + C MS Q+ LY + K ++G + L N ++QLRK+
Sbjct: 660 QLPAKEEQVEFCAMSERQQELYSALLHKLKHSSNGEKRE---------LTNVMMQLRKMS 710
Query: 850 NHPFM 854
NHP +
Sbjct: 711 NHPLL 715
Score = 343 (125.8 bits), Expect = 3.5e-73, Sum P(4) = 3.5e-73
Identities = 67/155 (43%), Positives = 104/155 (67%)
Query: 876 DLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAE 935
D+ SGK LL ++L LK G RV+LF Q T +++ILE + + +Y RLDG+T
Sbjct: 776 DVLLDSGKLSLLTQLLNSLKEKGDRVVLFSQFTMMLDILEVFLRHHKHRYNRLDGSTPMS 835
Query: 936 DRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRI 995
DR L+ +FN D + F+F+LSTRAGGLG+NL +A+ VI+ D D NP+ D QA+ R HR+
Sbjct: 836 DRIGLIDQFNT-DQDIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEGRCHRV 894
Query: 996 GQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKV 1030
GQ V+V++L++ +S+E+ +L KL +++++
Sbjct: 895 GQTKTVKVIKLISKDSIEDTMLRIGERKLKLEQEM 929
Score = 40 (19.1 bits), Expect = 3.5e-73, Sum P(4) = 3.5e-73
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 1059 EDEEENAVPDDET 1071
+D EE+ +PDD T
Sbjct: 933 QDGEEDTLPDDMT 945
Score = 37 (18.1 bits), Expect = 3.5e-73, Sum P(4) = 3.5e-73
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 182 QIKQSKLTNIPKPEGLDPL 200
Q + +KL++ PKP+ PL
Sbjct: 247 QAQVTKLSSPPKPKPSRPL 265
>SGD|S000006003 [details] [associations]
symbol:MOT1 "Essential protein involved in regulation of
transcription" species:4932 "Saccharomyces cerevisiae" [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0000228 "nuclear chromosome" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045898 "regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0042790 "transcription of nuclear large rRNA
transcript from RNA polymerase I promoter" evidence=IMP;IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SGD:S000006003 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0003677 GO:GO:0016887 EMBL:BK006949
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:U41849 GO:GO:0000228 GO:GO:0006364
HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI InterPro:IPR022707
Pfam:PF12054 GO:GO:0042790 GO:GO:0045898 OrthoDB:EOG44XNQZ
EMBL:M83224 PIR:S22775 RefSeq:NP_015243.1 ProteinModelPortal:P32333
SMR:P32333 DIP:DIP-2418N IntAct:P32333 MINT:MINT-623118
STRING:P32333 PaxDb:P32333 PeptideAtlas:P32333 PRIDE:P32333
EnsemblFungi:YPL082C GeneID:856023 KEGG:sce:YPL082C CYGD:YPL082c
GeneTree:ENSGT00630000089754 NextBio:980935 Genevestigator:P32333
GermOnline:YPL082C Uniprot:P32333
Length = 1867
Score = 512 (185.3 bits), Expect = 6.2e-73, Sum P(2) = 6.2e-73
Identities = 117/315 (37%), Positives = 172/315 (54%)
Query: 551 ILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALIT---YLM----EK- 602
I + L++YQ G+ W+ L +L+GIL D+MGLGKT+QTI +I YL EK
Sbjct: 1266 IAIKATLRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDQYLRKEDYEKT 1325
Query: 603 KKVNG---PFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVL 659
+ V P LII P S +W EF+++AP + VV Y G P +R TL+ Q+ S +++
Sbjct: 1326 RSVESRALPSLIICPPSLTGHWENEFDQYAPFLKVVVYAGGPTVRLTLRPQL--SDADII 1383
Query: 660 LTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQN 719
+T+Y+ D L K + Y ++DEGH +KN KL + A HRL+LTGTP+QN
Sbjct: 1384 VTSYDVARNDLAVLNKTEYNYCVLDEGHIIKNSQSKLAKAVKEI-TANHRLILTGTPIQN 1442
Query: 720 KLPELWALLNFLLPSIFKSVSTFEQWFNAPFATT-GEKVELNEEET-ILIIRRLHKVLRP 777
+ ELW+L +FL+P + F++ F P A + K E+E +L + LHK + P
Sbjct: 1443 NVLELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQEAGVLALEALHKQVLP 1502
Query: 778 FLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXX 837
F+LRRLK++V S LP K+ C++ LQK LY K + +
Sbjct: 1503 FMLRRLKEDVLSDLPPKIIQDYYCELGDLQKQLYMDFTKKQKNVVEKDIENSEIADGKQH 1562
Query: 838 LMNTIVQLRKLCNHP 852
+ + +RKLCNHP
Sbjct: 1563 IFQALQYMRKLCNHP 1577
Score = 322 (118.4 bits), Expect = 6.2e-73, Sum P(2) = 6.2e-73
Identities = 74/185 (40%), Positives = 109/185 (58%)
Query: 899 HRVLLFCQMTQLMNILE-DYFS-YR-GFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
HR L+FCQ+ +++++E D F Y YMRLDG+ DR +++KFN D +
Sbjct: 1647 HRALIFCQLKDMLDMVENDLFKKYMPSVTYMRLDGSIDPRDRQKVVRKFNE-DPSIDCLL 1705
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L+T+ GGLGLNL ADTVI + DWNP DLQA DRAHRIGQK V V R++T ++EE+
Sbjct: 1706 LTTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEK 1765
Query: 1016 ILAAARYKLNMDEKVIQAGMFDQKSTG---SERHQFLQTILHQDD--EEDEEENAVPDDE 1070
I+ ++K+N+ V+ +Q+++G + HQ L + D+ +D EE D +
Sbjct: 1766 IMGLQKFKMNIASTVV-----NQQNSGLASMDTHQLLD-LFDPDNVTSQDNEEKNNGDSQ 1819
Query: 1071 TVNQM 1075
M
Sbjct: 1820 AAKGM 1824
Score = 38 (18.4 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 845 LRKLCNHPFMFQNIEEKFSDH 865
L KLC+H + ++ K +H
Sbjct: 517 LAKLCDHQEVLDILKNKALEH 537
>WB|WBGene00010845 [details] [associations]
symbol:M03C11.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0003677 GO:GO:0006281 GO:GO:0016568 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 EMBL:Z49128 EMBL:AL021171 PIR:T23046
RefSeq:NP_499301.2 ProteinModelPortal:G5EDG2 SMR:G5EDG2
EnsemblMetazoa:M03C11.8 GeneID:176462 KEGG:cel:CELE_M03C11.8
WormBase:M03C11.8 OMA:KEERYMA NextBio:892680 Uniprot:G5EDG2
Length = 989
Score = 458 (166.3 bits), Expect = 7.3e-73, Sum P(3) = 7.3e-73
Identities = 123/336 (36%), Positives = 177/336 (52%)
Query: 538 AHTV---HEIVTE---QASILVNG-KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTI 590
AHTV E TE Q +L G L +YQ+ G++W++ ++N +LN IL DEMGLGKTI
Sbjct: 368 AHTVTKDFERCTEGPLQLPLLKEGCTLHDYQLIGVKWLIMMYNKDLNAILGDEMGLGKTI 427
Query: 591 QTIALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQ 650
Q +A ++YL + K GP LI+VP ST+ NW EF +W PS+ ++ Y GS RK L+ +
Sbjct: 428 QIVAFLSYLKQIGKT-GPHLIVVPSSTIENWIGEFHKWCPSIQLLTYYGSQDERKHLRHR 486
Query: 651 MKASK--FNVLLTTYEYVIK---DKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYV 705
+K K +V+LTTY V DK Y+I DEGH +KN C V
Sbjct: 487 VKKQKDHIDVILTTYNMVTSKSDDKKFFKNFSLNYVIYDEGHMLKN--CDSERYRGLMKV 544
Query: 706 -APHRLLLTGTPLQNKLPELWALLNFLLPSIF----KSVSTFEQWFN--APFATTGEKVE 758
++LLTGTPLQN L EL +L+ F+L +F + ++ Q F P T K
Sbjct: 545 KGKKKILLTGTPLQNNLIELISLMYFVLSKVFNKYCEDITHLLQHFKQLGPALDTKNKAL 604
Query: 759 LNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKG 818
++ I +L+P++LRRLK +V LP K E II+ +M QK LY ++
Sbjct: 605 YQQDR----IEEAKAILQPYILRRLKNQVLGSLPSKSEQIIEVEMKKPQKQLYDNI---- 656
Query: 819 ILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFM 854
+ SE ++++LR+ NHP +
Sbjct: 657 VEALQQSEESGDSY-------GSLMRLRQAANHPLL 685
Score = 371 (135.7 bits), Expect = 7.3e-73, Sum P(3) = 7.3e-73
Identities = 88/237 (37%), Positives = 142/237 (59%)
Query: 881 SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL 940
SGK E LD +LP+++ G +VL+F Q T +++ILE Y + RG+ Y RLDG T DR ++
Sbjct: 752 SGKCEQLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEM 811
Query: 941 LKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 1000
+ +FN + F+F+LSTRAGGLG+NL +A+ +II D D+NP+ D QA+DR HR+GQ+
Sbjct: 812 INEFNL-SKDLFVFLLSTRAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRMGQEKP 870
Query: 1001 VRVLRLMTVNSVEERILAAARYKLNMDEKVIQA--GMFDQ-------KSTGSER------ 1045
V V RL++ +VE +LA A+ KL ++++V G D+ + G E+
Sbjct: 871 VHVTRLVSKGTVEVGMLALAKKKLQLEKQVTDGVKGQLDEDALRELKEEEGGEQCGGRDL 930
Query: 1046 HQFLQTIL--HQDDEEDEE---ENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQ 1097
+ L + + DD ED+ +N + +E A+ E+E + ++ E++KE+
Sbjct: 931 SKLLSSAISGRYDDVEDDSGDSKNGIDAEEA-----AKKEDE-AVKEPVEKEQQKEE 981
Score = 47 (21.6 bits), Expect = 5.3e-39, Sum P(3) = 5.3e-39
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 1265 DIKKILGRIEDGKYSSVDELQKDFKTLCRNAQIYNEELSLIHEDSVVLESVFTKARQRVE 1324
D+ K+L G+Y V++ D K N I EE + ED V E V K +Q+ E
Sbjct: 929 DLSKLLSSAISGRYDDVEDDSGDSK----NG-IDAEEAAK-KEDEAVKEPV-EKEQQKEE 981
Query: 1325 SGE 1327
+
Sbjct: 982 ESQ 984
Score = 44 (20.5 bits), Expect = 7.3e-73, Sum P(3) = 7.3e-73
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 279 TKRQGLKEARATEKLEKQQKVEAERKKRQKHQE 311
T +QG A K +K+QK +AE + + E
Sbjct: 227 TMKQGQSLKAAMAKAQKEQKKKAESDEDWEEDE 259
Score = 39 (18.8 bits), Expect = 3.6e-38, Sum P(3) = 3.6e-38
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 1060 DEEENAVPDDETVNQMLARSEEEFQTYQ 1087
D EE A +DE V + + + +++ + Q
Sbjct: 957 DAEEAAKKEDEAVKEPVEKEQQKEEESQ 984
>POMBASE|SPCC1235.05c [details] [associations]
symbol:fft2 "fun thirty related protein Fft2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM;ISS] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0051276 "chromosome organization" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 PomBase:SPCC1235.05c GO:GO:0005829
GO:GO:0005524 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 OrthoDB:EOG4BCHW4 PIR:T40879 RefSeq:NP_587731.1
ProteinModelPortal:O74842 STRING:O74842 EnsemblFungi:SPCC1235.05c.1
GeneID:2539045 KEGG:spo:SPCC1235.05c KO:K14439 NextBio:20800219
Uniprot:O74842
Length = 1284
Score = 446 (162.1 bits), Expect = 8.2e-73, Sum P(2) = 8.2e-73
Identities = 121/339 (35%), Positives = 181/339 (53%)
Query: 543 EIVTEQASILVNG-KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLME 601
+ VTEQ L + +LK YQ+ G+ W+ L+ L+GILADEMGLGKT Q +A L+E
Sbjct: 535 KFVTEQPKTLASDVQLKSYQLVGVNWLHLLYQQKLSGILADEMGLGKTCQVVAFFALLLE 594
Query: 602 KKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKAS--KFNVL 659
+ +GP L++VP STL NW E R+ PS+ V Y GS R ++ ++ + K+++L
Sbjct: 595 QGH-HGPHLVVVPSSTLENWLRELARFCPSLRVEPYYGSQQERANIREAIEENEIKYDIL 653
Query: 660 LTTYEYVIKDKGPLAKL-HWKY--MIIDEGHRMKNHHC-KLTHILNTFYVAPHRLLLTGT 715
+TTY+ +K + L H + + DEGH +KN + H++N A RLLLTGT
Sbjct: 654 VTTYQLATNNKEDRSFLKHQNFDVCVYDEGHYLKNRMSERYKHLMNLN--ANFRLLLTGT 711
Query: 716 PLQNKLPELWALLNFLLPSIFKS-VSTFEQWFNA-PFATTG-EKVELNEEETILIIRRLH 772
PLQN L EL +LL F+LP++F S + + F A P A E+ L+++ I R
Sbjct: 712 PLQNNLKELVSLLAFILPNMFDSDMDDLDVIFKAKPTADADIEQALLSKQR----ISRAK 767
Query: 773 KVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRH---MHTKGILLTDG----- 824
++ PF+LRR K +V + LP K + I C +S Q +Y + L D
Sbjct: 768 TMMTPFVLRRRKNQVLNDLPKKTQIIEHCKLSENQLEIYNRYAALQKNQQLRRDDKRNKR 827
Query: 825 SEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNI--EEK 861
S+ + ++QLRK NH +F+ +EK
Sbjct: 828 SKNDEESDGKSLSAGHVLMQLRKAANHALLFRKFYDDEK 866
Score = 384 (140.2 bits), Expect = 8.2e-73, Sum P(2) = 8.2e-73
Identities = 99/268 (36%), Positives = 153/268 (57%)
Query: 876 DLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAE 935
D + SGK +L +LPK+K G R+LLF Q TQ+++ILE Y+RLDG+T+ E
Sbjct: 918 DPWMDSGKIRVLKELLPKMKEEGSRILLFSQFTQMLDILEQVLDTLKISYVRLDGSTQVE 977
Query: 936 DRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRI 995
R D++ +F+ + + +F+LST+AGG G+NL A+ VI++D +NP DLQA+DRAHR+
Sbjct: 978 VRQDIIDQFHK-EEDVTVFLLSTKAGGFGINLACANVVILYDCSYNPFDDLQAEDRAHRV 1036
Query: 996 GQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQ 1055
GQ EV V+RL+T N++EE I A KL +D + G D++ G ER +Q +L
Sbjct: 1037 GQVREVTVIRLITDNTIEEYIQKLANTKLALDMSLSSDGK-DREEIG-ER--LVQDML-- 1090
Query: 1056 DDEEDEEENAVPDDETVNQMLARSEEEFQTY-----QRIDAERRKE----QGKKSRLIEV 1106
DEE+ N P+ T N+ S+ EF+ ++ DAE +G + +E
Sbjct: 1091 -DEENNGNNTKPEI-TGNE----SDGEFKVSSSNNSKQTDAEETNTGVPLEGSQPNSVEK 1144
Query: 1107 SELPDWLIKEDEEIEQWAFEAKEEEKAL 1134
++L D K + + E + + + K L
Sbjct: 1145 TDLADGDEKANIKTEMKSETVEGDNKEL 1172
Score = 41 (19.5 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 375 YRKLIDQKKDKRLAFLLSQTDEY 397
+RK D +K K++A + Q ++Y
Sbjct: 858 FRKFYDDEKLKQMAKDIMQEEQY 880
Score = 37 (18.1 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
Identities = 24/94 (25%), Positives = 38/94 (40%)
Query: 1038 QKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQ 1097
+ ST L L D E + + ++T ++ +EE Q ID + K +
Sbjct: 1193 KSSTEEPNESVLSGHLDLDTEASPVVSTI--EKTTKGDVSVTEE--QQSANIDGQLEKPE 1248
Query: 1098 GKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEE 1131
IE S+ PD L + IE+ + KE E
Sbjct: 1249 ------IEESKKPDVLNQVSLSIEEEKPKNKESE 1276
>UNIPROTKB|K7GNV1 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360492.1 Ensembl:ENSSSCT00000032734
Uniprot:K7GNV1
Length = 1061
Score = 712 (255.7 bits), Expect = 2.2e-72, Sum P(3) = 2.2e-72
Identities = 145/311 (46%), Positives = 201/311 (64%)
Query: 550 SILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPF 609
S + G L++YQI+GL W++SL+ N +NGILADEMGLGKT+QTIAL+ YL + + GP
Sbjct: 179 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 238
Query: 610 LIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEYVIK 668
+++VP STL NW EF+RW PS+ V+ + G R ++ +M +++V +T+YE VIK
Sbjct: 239 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIK 298
Query: 669 DKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALL 728
+K K HW+Y++IDE HR+KN KL+ I+ F + +RLLLTGTPLQN L ELWALL
Sbjct: 299 EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFK-STNRLLLTGTPLQNNLHELWALL 357
Query: 729 NFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVE 788
NFLLP +F S F+ WF+ K L +++ ++ RLH VL+PFLLRR+K +VE
Sbjct: 358 NFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAVLKPFLLRRIKTDVE 407
Query: 789 SQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKL 848
LP K E IK + GL K + R +TK IL+ D L+N ++QLRK
Sbjct: 408 KSLPPKKE--IKIYL-GLSK-MQREWYTK-ILMKDIDVLNSAGKMDKMRLLNILMQLRKC 462
Query: 849 CNHPFMFQNIE 859
CNHP++F E
Sbjct: 463 CNHPYLFDGAE 473
Score = 681 (244.8 bits), Expect = 2.9e-64, Sum P(3) = 2.9e-64
Identities = 161/373 (43%), Positives = 220/373 (58%)
Query: 767 IIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
++ RLH VL+PFLLRR+K +VE LP K E IK + GL K + R +TK IL+ D
Sbjct: 386 LVERLHAVLKPFLLRRIKTDVEKSLPPKKE--IKIYL-GLSK-MQREWYTK-ILMKDIDV 440
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFEL 886
L+N ++QLRK CNHP++F E + IVS SGK +
Sbjct: 441 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG-PPYTTDEHIVSN------SGKMVV 493
Query: 887 LDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNA 946
LD++L KLK G RVL+F QMT+L++ILEDY +RG++Y RLDG T E+R + ++ FN
Sbjct: 494 LDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNV 553
Query: 947 PDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 1006
P+S FIF+LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK VRV RL
Sbjct: 554 PNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRL 613
Query: 1007 MTVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEENA 1065
+T N+VEERI+ A KL +D VIQ G + DQ+S + + LQ I H + +
Sbjct: 614 ITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKMAKEEMLQMIRHGATHVFASKES 673
Query: 1066 VPDDETVNQMLARSE----EEFQTYQRI-DAERRKEQGKKSRLIEVSELPDWLIKEDEEI 1120
DE + +L R E E + Q++ ++ R + + + E D+ K+ +
Sbjct: 674 ELTDEDITTLLERGERKTAEMNERLQKMGESSLRNFRMDTEQSLYKFEGEDYREKQKLGM 733
Query: 1121 EQWAFEAKEEEKA 1133
+W K E KA
Sbjct: 734 VEWIEPPKRERKA 746
Score = 80 (33.2 bits), Expect = 2.2e-72, Sum P(3) = 2.2e-72
Identities = 46/179 (25%), Positives = 83/179 (46%)
Query: 980 WNPHQDLQAQDRAHRIGQKNEVRVLRLMTVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1038
W +LQ ++ ++ E R+ R +++ +++ +I ARYK + IQ G
Sbjct: 894 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKI---ARYKAPFHQLRIQYGTSKG 950
Query: 1039 KSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKE-Q 1097
K+ E +FL +LH+ + EN E + Q + R+ +F+ I + E Q
Sbjct: 951 KNYTEEEDRFLICMLHKMGFD--RENVY---EELRQCV-RNAPQFRFDWFIKSRTAMEFQ 1004
Query: 1098 GKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKE 1156
+ + LI + E KE+ EIE+ E E++K S++RK T+S +K+
Sbjct: 1005 RRCNTLISLIE------KENMEIEER--ERAEKKKRATKTPMSQKRKAESATESSGKKD 1055
Score = 45 (20.9 bits), Expect = 2.2e-72, Sum P(3) = 2.2e-72
Identities = 18/77 (23%), Positives = 30/77 (38%)
Query: 254 RAEVIACARRDTTLETAVNVKAYKRTKRQG----LKEARATEKLEKQQKVEAERKKRQKH 309
+ E A A +T T K K+ ++ LK A K EK+ E E K +
Sbjct: 35 KEEGAAAAATASTEATVATEKGEKKKEKNASPFQLKLAAKASKSEKEMDPEYEEKMKADR 94
Query: 310 QEYITTVLQHCKDFKEY 326
+ +L+ + F +
Sbjct: 95 AKRFEFLLKQTELFAHF 111
Score = 41 (19.5 bits), Expect = 2.7e-68, Sum P(3) = 2.7e-68
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E + DI+KI+ +IE G+
Sbjct: 893 FWERCNELQDIEKIMAQIERGE 914
Score = 40 (19.1 bits), Expect = 7.3e-72, Sum P(3) = 7.3e-72
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 371 DEEGYRKLIDQKKDKRLAFLLSQTD 395
D E Y + + + KR FLL QT+
Sbjct: 83 DPE-YEEKMKADRAKRFEFLLKQTE 106
>DICTYBASE|DDB_G0281441 [details] [associations]
symbol:ercc6 "DNA excision repair protein 6"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006289 "nucleotide-excision repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0281441 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000152_GR GO:GO:0003677
EMBL:AAFI02000041 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006289 GO:GO:0008094 KO:K10841
RefSeq:XP_640679.1 ProteinModelPortal:Q54TY2 STRING:Q54TY2
EnsemblProtists:DDB0232361 GeneID:8623063 KEGG:ddi:DDB_G0281441
InParanoid:Q54TY2 OMA:NIHKERW ProtClustDB:CLSZ2736745
Uniprot:Q54TY2
Length = 1655
Score = 752 (269.8 bits), Expect = 2.5e-72, Sum P(2) = 2.5e-72
Identities = 166/486 (34%), Positives = 269/486 (55%)
Query: 557 LKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVPLS 616
L EYQ+ + W+ L GI+ DEMGLGKT+Q ++ + L +++ GP LI+ P +
Sbjct: 795 LFEYQVTCVRWLYELHCQETGGIVGDEMGLGKTVQIVSFLASLHYSRRLGGPALIVAPAT 854
Query: 617 TLSNWSLEFERWAPSVNVVAYK-------GSPHLRKTLQAQMKASKFNVLLTTYEYVIKD 669
LSNW EF +W P V + G+ K + A K ++LLTT++ + +
Sbjct: 855 LLSNWIKEFHKWWPPFRVGLFHSSGSGGGGNDGSDKEDIVKKIAEKGHILLTTFDSIRIN 914
Query: 670 KGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLN 729
+ L K HW+Y+I+DEGH+++N ++T PHR++L+G+P+QNKL ELW+L +
Sbjct: 915 QEILLKYHWEYVILDEGHKIRNPDAEITLSCKQLQT-PHRVILSGSPIQNKLTELWSLFD 973
Query: 730 FLLPSIFKSVSTFEQWFNAPFATTG--EKVELNEEETILIIRRLHKVLRPFLLRRLKKEV 787
F+ P ++ F+ F+ P + G + + L ++ P++LRR+K +V
Sbjct: 974 FVFPGRLGTLPIFKSQFSLPISVGGFANASPIQVQAAYKCAVALRDLISPYMLRRVKSDV 1033
Query: 788 ESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRK 847
LP K E ++ C ++ Q+ LY + D ++ L + L+K
Sbjct: 1034 LKSLPSKNEQVLMCPLTPFQEKLY-------LEFLDSNDIKSVLDGRRNALYGIDI-LKK 1085
Query: 848 LCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLFCQM 907
+CNHP + +++ D G ++ R S K ++++ ILP G +VLLFCQ
Sbjct: 1086 ICNHPDIL-HMDASDEDRPHDYG-----NIER-SAKLKVVETILPLWFKQGDKVLLFCQT 1138
Query: 908 TQLMNILEDYF-SYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLN 966
Q+++I+E Y F Y+R+DGTT R L+++FN D FIF+L+T+ GGLGLN
Sbjct: 1139 RQMLDIVEQYIRDSTQFNYLRMDGTTSIRQRQCLVEQFNI-DPSLFIFLLTTKVGGLGLN 1197
Query: 967 LQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNM 1026
L A+ VI+FD DWNP D+QA++R +RIGQK V + RL+T+ ++EE+I YK +
Sbjct: 1198 LTGANRVILFDPDWNPSTDMQARERVYRIGQKKAVTIYRLITLGTIEEKIYHRQIYKQFL 1257
Query: 1027 DEKVIQ 1032
K+++
Sbjct: 1258 TNKILK 1263
Score = 59 (25.8 bits), Expect = 2.5e-72, Sum P(2) = 2.5e-72
Identities = 28/110 (25%), Positives = 57/110 (51%)
Query: 207 ENRVALNIERRI--EELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLRAEVIACARRD 264
EN+V I++ I E+N L L + +E E K N +R++ E +D
Sbjct: 197 ENKVIHKIDKEILYNEIN-ELDIKLKKIRNDISEAEQFLFK--NNEREIN-EKNKDIDKD 252
Query: 265 TTLETAVNVKAYKRTKRQGLK-EARATEK--LEKQQKVEAERKKRQKHQE 311
T L + +++ +++ K LK + ++T+ +E ++K++ +R+KR Q+
Sbjct: 253 T-LASLISLITFEKKKLSDLKSQEKSTQNKIIEIKEKIKTDREKRINDQK 301
Score = 42 (19.8 bits), Expect = 1.5e-70, Sum P(2) = 1.5e-70
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 288 RATEKLE-KQQKV--EAERKKRQKHQEY 312
+ T + + K++KV E E+KK++K ++Y
Sbjct: 406 KTTNRFDAKKKKVLTEKEKKKQKKMKKY 433
>MGI|MGI:1935127 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0007420 "brain
development" evidence=ISO;IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016589 "NURF complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0036310 "annealing helicase activity" evidence=ISO] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=ISO]
[GO:0090537 "CERF complex" evidence=ISO] [GO:2000177 "regulation of
neural precursor cell proliferation" evidence=IGI;IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1935127 GO:GO:0005524 GO:GO:0005634
GO:GO:0045893 GO:GO:0007420 GO:GO:0030182 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016589 GO:GO:0036310 GO:GO:0008094
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 SUPFAM:SSF101224
CTD:6594 HOVERGEN:HBG056329 KO:K11727 EMBL:AF325920 EMBL:AK030741
EMBL:AL671903 EMBL:BC057115 IPI:IPI00314654 IPI:IPI00761324
RefSeq:NP_444353.3 UniGene:Mm.229151 HSSP:Q24368
ProteinModelPortal:Q6PGB8 SMR:Q6PGB8 STRING:Q6PGB8
PhosphoSite:Q6PGB8 PaxDb:Q6PGB8 PRIDE:Q6PGB8
Ensembl:ENSMUST00000077569 Ensembl:ENSMUST00000088973
Ensembl:ENSMUST00000101616 GeneID:93761 KEGG:mmu:93761
UCSC:uc009tbl.2 UCSC:uc009tbm.2 InParanoid:B1AUP6 OrthoDB:EOG44J2H9
NextBio:351647 Bgee:Q6PGB8 Genevestigator:Q6PGB8
GermOnline:ENSMUSG00000031099 Uniprot:Q6PGB8
Length = 1046
Score = 716 (257.1 bits), Expect = 2.6e-72, Sum P(3) = 2.6e-72
Identities = 150/327 (45%), Positives = 208/327 (63%)
Query: 550 SILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPF 609
S + G L++YQI+GL W++SL+ N +NGILADEMGLGKT+QTIAL+ YL + + GP
Sbjct: 180 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 239
Query: 610 LIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEYVIK 668
+++VP STL NW EF+RW PS+ V+ + G +R ++ +M +++V +T+YE VIK
Sbjct: 240 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMPGEWDVCVTSYEMVIK 299
Query: 669 DKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALL 728
+K K HW+Y++IDE HR+KN KL+ I+ F + +RLLLTGTPLQN L ELWALL
Sbjct: 300 EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFK-STNRLLLTGTPLQNNLHELWALL 358
Query: 729 NFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVE 788
NFLLP +F S F+ WF+ K L +++ ++ RLH VL+PFLLRR+K +VE
Sbjct: 359 NFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAVLKPFLLRRIKTDVE 408
Query: 789 SQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKL 848
LP K E IK + GL K + R +TK IL+ D L+N ++QLRK
Sbjct: 409 KSLPPKKE--IKIYL-GLSK-MQREWYTK-ILMKDIDVLNSSGKMDKMRLLNILMQLRKC 463
Query: 849 CNHPFMFQNIEE----KFSDH-VGGSG 870
CNHP++F E +H VG SG
Sbjct: 464 CNHPYLFDGAEPGPPYTTDEHIVGNSG 490
Score = 666 (239.5 bits), Expect = 1.3e-62, Sum P(3) = 1.3e-62
Identities = 162/377 (42%), Positives = 220/377 (58%)
Query: 767 IIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
++ RLH VL+PFLLRR+K +VE LP K E IK + GL K + R +TK IL+ D
Sbjct: 387 LVERLHAVLKPFLLRRIKTDVEKSLPPKKE--IKIYL-GLSK-MQREWYTK-ILMKDIDV 441
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFEL 886
L+N ++QLRK CNHP++F E G + + SGK
Sbjct: 442 LNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEP-------GPPYTTDEHIVGNSGKMVA 494
Query: 887 LDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNA 946
LD++L ++K G RVL+F QMT+L++ILEDY +RG++Y RLDG T E+R + + FNA
Sbjct: 495 LDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFNA 554
Query: 947 PDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 1006
P+S FIF+LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK VRV RL
Sbjct: 555 PNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRL 614
Query: 1007 MTVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEENA 1065
+T N+VEERI+ A KL +D VIQ G + DQ+S + + LQ I H + +
Sbjct: 615 ITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFACKES 674
Query: 1066 VPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKS----RL-IEVS----ELPDWLIKE 1116
DE + +L R E++ ER ++ G+ S R+ +E S E D+ K+
Sbjct: 675 ELTDEDIVTILERGEKKTAEMN----ERMQKMGESSLRNFRMDLEQSLYKFEGEDYREKQ 730
Query: 1117 DEEIEQWAFEAKEEEKA 1133
+W K E KA
Sbjct: 731 KLGTVEWIEPPKRERKA 747
Score = 71 (30.1 bits), Expect = 2.6e-72, Sum P(3) = 2.6e-72
Identities = 36/145 (24%), Positives = 67/145 (46%)
Query: 980 WNPHQDLQAQDRAHRIGQKNEVRVLRLMTVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1038
W +LQ ++ ++ E R+ R +++ +++ +I ARYK + IQ G
Sbjct: 895 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKI---ARYKAPFHQLRIQYGTSKG 951
Query: 1039 KSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKE-Q 1097
K+ E +FL +LH+ + EN E + Q + R+ +F+ I + E Q
Sbjct: 952 KNYTEEEDRFLICMLHKMGFD--RENVY---EELRQCV-RNAPQFRFDWFIKSRTAMEFQ 1005
Query: 1098 GKKSRLIEVSELPDWLIKEDEEIEQ 1122
+ + LI + E + I+E E E+
Sbjct: 1006 RRCNTLISLIEKENMEIEERERAEK 1030
Score = 46 (21.3 bits), Expect = 2.6e-72, Sum P(3) = 2.6e-72
Identities = 17/51 (33%), Positives = 20/51 (39%)
Query: 254 RAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERK 304
+ E A A + T T K K T LK A K EK+ E E K
Sbjct: 35 KEEGAAAAATEGTTATEKGEKKEKITSPFQLKLAAKASKSEKEMDPEYEEK 85
Score = 41 (19.5 bits), Expect = 3.6e-69, Sum P(3) = 3.6e-69
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E + DI+KI+ +IE G+
Sbjct: 894 FWERCNELQDIEKIMAQIERGE 915
Score = 39 (18.8 bits), Expect = 1.4e-71, Sum P(3) = 1.4e-71
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 371 DEEGYRKLIDQ--KKD--KRLAFLLSQTD 395
D E K+++ K D KR FLL QT+
Sbjct: 79 DPEYEEKMVNMPLKADRAKRFEFLLKQTE 107
>UNIPROTKB|I3LTT5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 EMBL:CU695129
Ensembl:ENSSSCT00000027860 Uniprot:I3LTT5
Length = 778
Score = 712 (255.7 bits), Expect = 8.0e-72, Sum P(2) = 8.0e-72
Identities = 145/311 (46%), Positives = 201/311 (64%)
Query: 550 SILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPF 609
S + G L++YQI+GL W++SL+ N +NGILADEMGLGKT+QTIAL+ YL + + GP
Sbjct: 179 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 238
Query: 610 LIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEYVIK 668
+++VP STL NW EF+RW PS+ V+ + G R ++ +M +++V +T+YE VIK
Sbjct: 239 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIK 298
Query: 669 DKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALL 728
+K K HW+Y++IDE HR+KN KL+ I+ F + +RLLLTGTPLQN L ELWALL
Sbjct: 299 EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFK-STNRLLLTGTPLQNNLHELWALL 357
Query: 729 NFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVE 788
NFLLP +F S F+ WF+ K L +++ ++ RLH VL+PFLLRR+K +VE
Sbjct: 358 NFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAVLKPFLLRRIKTDVE 407
Query: 789 SQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKL 848
LP K E IK + GL K + R +TK IL+ D L+N ++QLRK
Sbjct: 408 KSLPPKKE--IKIYL-GLSK-MQREWYTK-ILMKDIDVLNSAGKMDKMRLLNILMQLRKC 462
Query: 849 CNHPFMFQNIE 859
CNHP++F E
Sbjct: 463 CNHPYLFDGAE 473
Score = 681 (244.8 bits), Expect = 2.4e-68, Sum P(2) = 2.4e-68
Identities = 161/373 (43%), Positives = 220/373 (58%)
Query: 767 IIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
++ RLH VL+PFLLRR+K +VE LP K E IK + GL K + R +TK IL+ D
Sbjct: 386 LVERLHAVLKPFLLRRIKTDVEKSLPPKKE--IKIYL-GLSK-MQREWYTK-ILMKDIDV 440
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFEL 886
L+N ++QLRK CNHP++F E + IVS SGK +
Sbjct: 441 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG-PPYTTDEHIVSN------SGKMVV 493
Query: 887 LDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNA 946
LD++L KLK G RVL+F QMT+L++ILEDY +RG++Y RLDG T E+R + ++ FN
Sbjct: 494 LDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNV 553
Query: 947 PDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 1006
P+S FIF+LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK VRV RL
Sbjct: 554 PNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRL 613
Query: 1007 MTVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEENA 1065
+T N+VEERI+ A KL +D VIQ G + DQ+S + + LQ I H + +
Sbjct: 614 ITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKMAKEEMLQMIRHGATHVFASKES 673
Query: 1066 VPDDETVNQMLARSE----EEFQTYQRI-DAERRKEQGKKSRLIEVSELPDWLIKEDEEI 1120
DE + +L R E E + Q++ ++ R + + + E D+ K+ +
Sbjct: 674 ELTDEDITTLLERGERKTAEMNERLQKMGESSLRNFRMDTEQSLYKFEGEDYREKQKLGM 733
Query: 1121 EQWAFEAKEEEKA 1133
+W K E KA
Sbjct: 734 VEWIEPPKRERKA 746
Score = 45 (20.9 bits), Expect = 8.0e-72, Sum P(2) = 8.0e-72
Identities = 18/77 (23%), Positives = 30/77 (38%)
Query: 254 RAEVIACARRDTTLETAVNVKAYKRTKRQG----LKEARATEKLEKQQKVEAERKKRQKH 309
+ E A A +T T K K+ ++ LK A K EK+ E E K +
Sbjct: 35 KEEGAAAAATASTEATVATEKGEKKKEKNASPFQLKLAAKASKSEKEMDPEYEEKMKADR 94
Query: 310 QEYITTVLQHCKDFKEY 326
+ +L+ + F +
Sbjct: 95 AKRFEFLLKQTELFAHF 111
Score = 40 (19.1 bits), Expect = 2.7e-71, Sum P(2) = 2.7e-71
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 371 DEEGYRKLIDQKKDKRLAFLLSQTD 395
D E Y + + + KR FLL QT+
Sbjct: 83 DPE-YEEKMKADRAKRFEFLLKQTE 106
>UNIPROTKB|E2QVR5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224
Ensembl:ENSCAFT00000029649 Uniprot:E2QVR5
Length = 1073
Score = 709 (254.6 bits), Expect = 2.6e-71, Sum P(3) = 2.6e-71
Identities = 144/311 (46%), Positives = 200/311 (64%)
Query: 550 SILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPF 609
S + G L++YQI+GL W++SL+ N +NGILADEMGLGKT+QTIAL+ YL + + GP
Sbjct: 188 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 247
Query: 610 LIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEYVIK 668
+++VP STL NW EF+RW PS+ V+ + G R ++ +M +++V +T+YE VIK
Sbjct: 248 MVLVPKSTLYNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIK 307
Query: 669 DKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALL 728
+K K HW+Y++IDE HR+KN KL+ I+ F + +RLLLTGTPLQN L ELWALL
Sbjct: 308 EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFK-STNRLLLTGTPLQNNLHELWALL 366
Query: 729 NFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVE 788
NFLLP +F S F+ WF+ K L +++ ++ RLH VL+PFLLRR+K +VE
Sbjct: 367 NFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAVLKPFLLRRIKTDVE 416
Query: 789 SQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKL 848
LP K E IK + GL K+ +TK IL+ D L+N ++QLRK
Sbjct: 417 KSLPPKKE--IKVYL-GLSKMQREWWYTK-ILMKDIDVLNSAGKMDKMRLLNILMQLRKC 472
Query: 849 CNHPFMFQNIE 859
CNHP++F E
Sbjct: 473 CNHPYLFDGAE 483
Score = 671 (241.3 bits), Expect = 2.3e-62, Sum P(3) = 2.3e-62
Identities = 160/375 (42%), Positives = 221/375 (58%)
Query: 767 IIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
++ RLH VL+PFLLRR+K +VE LP K E IK + GL K+ +TK IL+ D
Sbjct: 395 LVERLHAVLKPFLLRRIKTDVEKSLPPKKE--IKVYL-GLSKMQREWWYTK-ILMKDIDV 450
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFEL 886
L+N ++QLRK CNHP++F E + IVS SGK +
Sbjct: 451 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG-PPYTTDEHIVSN------SGKMVV 503
Query: 887 LDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRG--DLLKKF 944
LD++L KLK G RVL+F QMT+L++ILEDY +RG++Y RLDG T E+R + ++ F
Sbjct: 504 LDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREKKEAIEAF 563
Query: 945 NAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVL 1004
NAP+S FIF+LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK VRV
Sbjct: 564 NAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVF 623
Query: 1005 RLMTVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEE 1063
RL+T N+VEERI+ A KL +D VIQ G + DQ+S + + LQ I H +
Sbjct: 624 RLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFASK 683
Query: 1064 NAVPDDETVNQMLARSEEEF-QTYQRI----DAERRKEQGKKSRLIEVSELPDWLIKEDE 1118
+ DE + +L R E++ + +R+ ++ R + + + E D+ K+
Sbjct: 684 ESELTDEDITTLLERGEKKTAEMNERLQKMGESSLRNFRMDTEQSLYKFEGEDYREKQKL 743
Query: 1119 EIEQWAFEAKEEEKA 1133
+ +W K E KA
Sbjct: 744 GMVEWIEPPKRERKA 758
Score = 80 (33.2 bits), Expect = 2.6e-71, Sum P(3) = 2.6e-71
Identities = 46/179 (25%), Positives = 83/179 (46%)
Query: 980 WNPHQDLQAQDRAHRIGQKNEVRVLRLMTVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1038
W +LQ ++ ++ E R+ R +++ +++ +I ARYK + IQ G
Sbjct: 906 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKI---ARYKAPFHQLRIQYGTSKG 962
Query: 1039 KSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKE-Q 1097
K+ E +FL +LH+ + EN E + Q + R+ +F+ I + E Q
Sbjct: 963 KNYTEEEDRFLICMLHKMGFD--RENVY---EELRQCV-RNAPQFRFDWFIKSRTAMEFQ 1016
Query: 1098 GKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKE 1156
+ + LI + E KE+ EIE+ E E++K S++RK T+S +K+
Sbjct: 1017 RRCNTLISLIE------KENMEIEER--ERAEKKKRATKTPMSQKRKAESATESSGKKD 1067
Score = 41 (19.5 bits), Expect = 3.2e-67, Sum P(3) = 3.2e-67
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E + DI+KI+ +IE G+
Sbjct: 905 FWERCNELQDIEKIMAQIERGE 926
Score = 40 (19.1 bits), Expect = 2.6e-71, Sum P(3) = 2.6e-71
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 370 EDEEGYRKLIDQKKD--KRLAFLLSQTD 395
E EE + +K D KR FLL QT+
Sbjct: 85 EYEEKMVNIFLEKADRAKRFEFLLKQTE 112
>UNIPROTKB|F1P3Q4 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016589 "NURF
complex" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0008094 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AADN02013587 EMBL:AADN02013588
IPI:IPI00594974 Ensembl:ENSGALT00000013737 Uniprot:F1P3Q4
Length = 982
Score = 697 (250.4 bits), Expect = 8.3e-71, Sum P(3) = 8.3e-71
Identities = 144/314 (45%), Positives = 198/314 (63%)
Query: 547 EQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVN 606
E S + G L++YQ++GL WM+SL+ N +NGILADEMGLGKT+QTIAL+ YL + +
Sbjct: 97 ESPSYVKGGTLRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIP 156
Query: 607 GPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEY 665
GP +++VP STL NW EF+RW PS+ V G R ++ M +++V +T+YE
Sbjct: 157 GPHMVLVPKSTLHNWMNEFKRWVPSLRAVCLIGDKDARAAFIRDVMMPGEWDVCVTSYEM 216
Query: 666 VIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELW 725
VIK+K K +W+Y++IDE HR+KN KL+ I+ F +RLLLTGTPLQN L ELW
Sbjct: 217 VIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTT-NRLLLTGTPLQNNLHELW 275
Query: 726 ALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 785
ALLNFLLP +F S F+ WF+ K L +++ ++ RLH VL+PFLLRR+K
Sbjct: 276 ALLNFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAVLKPFLLRRIKA 325
Query: 786 EVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQL 845
EVE LP K E +K + GL K + R +T+ IL+ D L+N ++QL
Sbjct: 326 EVEKSLPPKKE--VKIYL-GLSK-MQREWYTR-ILMKDIDILNSAGKMDKMRLLNILMQL 380
Query: 846 RKLCNHPFMFQNIE 859
RK CNHP++F E
Sbjct: 381 RKCCNHPYLFDGAE 394
Score = 679 (244.1 bits), Expect = 3.1e-64, Sum P(3) = 3.1e-64
Identities = 160/373 (42%), Positives = 219/373 (58%)
Query: 767 IIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
++ RLH VL+PFLLRR+K EVE LP K E +K + GL K + R +T+ IL+ D
Sbjct: 307 LVERLHAVLKPFLLRRIKAEVEKSLPPKKE--VKIYL-GLSK-MQREWYTR-ILMKDIDI 361
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFEL 886
L+N ++QLRK CNHP++F E G + L SGK +
Sbjct: 362 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP-------GPPYTTDTHLITNSGKMLV 414
Query: 887 LDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNA 946
LD++L KL+ G RVLLF QMT+L++ILEDY +RG++Y RLDG T E+R + + FNA
Sbjct: 415 LDKLLAKLREQGSRVLLFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFNA 474
Query: 947 PDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 1006
P+S FIF+LSTRAGGLG+NL TAD VI++DSDWNP DLQA DRAHRIGQK VRV RL
Sbjct: 475 PNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRL 534
Query: 1007 MTVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEENA 1065
+T N+VEERI+ A KL +D VIQ G + DQ+S + + LQ I H +++
Sbjct: 535 ITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKDEMLQMIRHGATHVFASKDS 594
Query: 1066 VPDDETVNQMLARSEEEF-QTYQRIDAERRKEQGKKSRLIEVS----ELPDWLIKEDEEI 1120
+E + +L R E++ + +R+ + E+S E D+ K+ +
Sbjct: 595 ELTEEDITTILERGEKKTAEMNERLQKMGESSLRNFTMDTEMSLYNFEGEDYREKQKLSM 654
Query: 1121 EQWAFEAKEEEKA 1133
+W K E KA
Sbjct: 655 MEWIEPPKRERKA 667
Score = 75 (31.5 bits), Expect = 8.3e-71, Sum P(3) = 8.3e-71
Identities = 37/145 (25%), Positives = 68/145 (46%)
Query: 980 WNPHQDLQAQDRAHRIGQKNEVRVLRLMTVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1038
W +LQ +R ++ E R+ R +++ +++ +I ARYK + IQ G
Sbjct: 815 WERCNELQDIERIMAQIERGEARIQRRISIKKALDAKI---ARYKAPFHQLRIQYGTNKG 871
Query: 1039 KSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKE-Q 1097
K+ E +FL +LH+ + +EN E + Q + R+ +F+ I + E Q
Sbjct: 872 KNYTEEEDRFLICMLHKMGFD--KENVY---EELRQCV-RNAPQFRFDWFIKSRTAMEFQ 925
Query: 1098 GKKSRLIEVSELPDWLIKEDEEIEQ 1122
+ + LI + E + I+E E E+
Sbjct: 926 RRCNTLISLIEKENMEIEEKERAEK 950
Score = 40 (19.1 bits), Expect = 8.3e-71, Sum P(3) = 8.3e-71
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 371 DEEGYRKLIDQKKDKRLAFLLSQTD 395
D E Y + + + KR FLL QT+
Sbjct: 4 DPE-YEEKMKADRAKRFEFLLKQTE 27
Score = 38 (18.4 bits), Expect = 6.2e-67, Sum P(3) = 6.2e-67
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E + DI++I+ +IE G+
Sbjct: 814 FWERCNELQDIERIMAQIERGE 835
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 600 (216.3 bits), Expect = 2.2e-70, Sum P(3) = 2.2e-70
Identities = 144/391 (36%), Positives = 226/391 (57%)
Query: 755 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHM 814
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+ +
Sbjct: 853 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFI 909
Query: 815 HTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSG 874
T+ + L+N ++ L+K CNHP++F + V +G G
Sbjct: 910 LTRNFEALNSK-----GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP--VLPNGSYDG 962
Query: 875 PDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKA 934
L + SGK LL ++L KL+ GHRVL+F QMT+++++LED+ Y G+KY R+DG
Sbjct: 963 SSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITG 1022
Query: 935 EDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHR 994
R + + +FNAP ++ F F+LSTRAGGLG+NL TADTVII+DSDWNPH D+QA RAHR
Sbjct: 1023 GLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHR 1082
Query: 995 IGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILH 1054
IGQ +V + R +T SVEERI A+ K+ + V++ G+ KS GS Q L IL
Sbjct: 1083 IGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGL-GSKS-GSMTKQELDDILK 1140
Query: 1055 -------QDDEE----DEEENAVP--DDETVNQMLARSEEEFQTYQRIDAERRKEQGKKS 1101
+DD E D E+++V DD ++++L R++ DA E +
Sbjct: 1141 FGTEELFKDDVEGDNKDVEDSSVIHYDDAAISKLLDRNQ---------DATDDTELQNMN 1191
Query: 1102 RLIEVSELPDWLIKEDEEIEQWAFEA-KEEE 1131
+ ++ ++++E++ +E+ E K+EE
Sbjct: 1192 EYLSSFKVAQYVVREEDGVEEVEREIIKQEE 1222
Score = 299 (110.3 bits), Expect = 3.5e-42, Sum P(4) = 3.5e-42
Identities = 63/163 (38%), Positives = 102/163 (62%)
Query: 655 KFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTG 714
KF+VLLT+YE + D+ L + W +++DE HR+KN+ K +LN++ + ++LLLTG
Sbjct: 764 KFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKI-DYKLLLTG 822
Query: 715 TPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 774
TPLQN L EL+ LLNFL P F ++ F + F ++++E+ I ++LH +
Sbjct: 823 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 869
Query: 775 LRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK 817
L P +LRRLK +V +P K E I++ ++S +QK Y+ + T+
Sbjct: 870 LGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR 912
Score = 219 (82.2 bits), Expect = 2.2e-70, Sum P(3) = 2.2e-70
Identities = 42/94 (44%), Positives = 56/94 (59%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKT+QTI + L ++ GP+L+ P
Sbjct: 644 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAP 703
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ 648
LST+ NW EFE WAP VV Y G R ++
Sbjct: 704 LSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 737
Score = 95 (38.5 bits), Expect = 3.5e-42, Sum P(4) = 3.5e-42
Identities = 30/117 (25%), Positives = 60/117 (51%)
Query: 1055 QDDEEDEEENAVP--DDETVNQMLARSEE-----EFQTYQRIDAERRKEQGKKSRLIEVS 1107
+ D +D E+++V DD ++++L R+++ E Q + + Q V
Sbjct: 1152 EGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVE 1211
Query: 1108 ELPDWLIKEDEEIEQ--WA------FEAKEEEKALHMGRGSRQRKQVDYTDSLTEKE 1156
E+ +IK++E ++ W +E ++E+ A ++G+G R RKQV+Y D+ E +
Sbjct: 1212 EVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQ 1268
Score = 44 (20.5 bits), Expect = 4.9e-36, Sum P(5) = 4.9e-36
Identities = 13/68 (19%), Positives = 30/68 (44%)
Query: 1068 DDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEA 1127
D + ++ SE+E + ++ R++ ++ + LP L + IE F A
Sbjct: 1267 DQDNQSEYSIGSEDEDEDFEERPEGGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNA 1326
Query: 1128 KEEEKALH 1135
++ + L+
Sbjct: 1327 RQRKAFLN 1334
Score = 42 (19.8 bits), Expect = 7.8e-36, Sum P(5) = 7.8e-36
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 1005 RLMTVNSVEERILAAARYKLNMDEKVIQA-GMFDQKSTGSERHQFLQTILHQDDEEDEE 1062
+L+ N + +L ++ N+ V + G D T +E + ++T + D EEDEE
Sbjct: 1527 QLLKGNFISHVLLLISKRSRNVPLSVSRTPGPRDD--TKAEEKEPVETQQNGDKEEDEE 1583
Score = 42 (19.8 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 679 KYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLN 729
+YMI++E + + H + N F +LL ++ +L A LN
Sbjct: 1656 RYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRA-AYLN 1705
Score = 37 (18.1 bits), Expect = 2.2e-70, Sum P(3) = 2.2e-70
Identities = 6/21 (28%), Positives = 16/21 (76%)
Query: 291 EKLEKQQKVEAERKKRQKHQE 311
+KL+ +++ +A+RKK+ ++
Sbjct: 31 KKLKDKKEKKAKRKKKDDEED 51
Score = 37 (18.1 bits), Expect = 4.9e-36, Sum P(5) = 4.9e-36
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 908 TQLMNILEDYFSYRGFKYM--RLDGTTKAEDRGDLLKKFNAPDSEYF 952
T+L N+ E S++ +Y+ DG + E +++K+ D +Y+
Sbjct: 1185 TELQNMNEYLSSFKVAQYVVREEDGVEEVER--EIIKQEENVDPDYW 1229
>TAIR|locus:2040184 [details] [associations]
symbol:PKL "PICKLE" species:3702 "Arabidopsis thaliana"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=IMP] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:2000023 "regulation of lateral
root development" evidence=IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0009739 "response to gibberellin
stimulus" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0016568 GO:GO:0048364 GO:GO:0009739 GO:GO:0009788
GO:GO:0009736 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOGENOM:HOG000231124 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF185578 EMBL:AF185577 EMBL:AK229409 IPI:IPI00521160
PIR:T52301 RefSeq:NP_565587.1 UniGene:At.11745
ProteinModelPortal:Q9S775 SMR:Q9S775 STRING:Q9S775 PaxDb:Q9S775
PRIDE:Q9S775 EnsemblPlants:AT2G25170.1 GeneID:817055
KEGG:ath:AT2G25170 TAIR:At2g25170 InParanoid:Q9S775 OMA:NVVMYFG
PhylomeDB:Q9S775 ProtClustDB:CLSN2688404 Genevestigator:Q9S775
GermOnline:AT2G25170 GO:GO:2000023 Uniprot:Q9S775
Length = 1384
Score = 731 (262.4 bits), Expect = 3.4e-70, Sum P(2) = 3.4e-70
Identities = 192/560 (34%), Positives = 293/560 (52%)
Query: 553 VNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLII 612
+ G L YQ++GL ++ ++ + ILADEMGLGKTIQ+IAL+ L E+ + P L+I
Sbjct: 269 LKGLLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASLFEENLI--PHLVI 326
Query: 613 VPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGP 672
PLSTL NW EF WAP +NVV Y G+ R A ++ +F + + K G
Sbjct: 327 APLSTLRNWEREFATWAPQMNVVMYFGTAQAR----AVIREHEFYLSKDQKKIKKKKSGQ 382
Query: 673 LA----KLHWKYMIIDEGHRMKN-HHCKLTHILNTFYVAP--HRLLLTGTPLQNKLPELW 725
++ + K+ ++ + M N L I + HRL + L + L +
Sbjct: 383 ISSESKQKRIKFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYS 442
Query: 726 ALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNE--EETILI-----IRRLHKVLRPF 778
+ LL + E + F G+ L E EE I I RLHK+L P
Sbjct: 443 SNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPH 502
Query: 779 LLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXL 838
LLRR+KK+V +P K E I++ D+S LQK Y+ + T+ + L
Sbjct: 503 LLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTRNY------QVLTKKGGAQISL 556
Query: 839 MNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTG 898
N +++LRK+C HP+M + +E D + L GK +LLD+++ KLK G
Sbjct: 557 NNIMMELRKVCCHPYMLEGVEPVIHD-----ANEAFKQLLESCGKLQLLDKMMVKLKEQG 611
Query: 899 HRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLST 958
HRVL++ Q ++++LEDY +++ ++Y R+DG +R + +FNA +S F F+LST
Sbjct: 612 HRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLST 671
Query: 959 RAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILA 1018
RAGGLG+NL TADTVII+DSDWNPH DLQA RAHR+GQ N+V + RL+ ++EER++
Sbjct: 672 RAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQ 731
Query: 1019 AARYKLNMDEKVIQAGMFDQKSTGSE------RHQFLQTILHQDDEEDEEENAVPDDETV 1072
+ K+ ++ V+ G ++ E R+ + +DDE + DD +
Sbjct: 732 LTKKKMVLEHLVV--GKLKTQNINQEELDDIIRYGSKELFASEDDEAGKSGKIHYDDAAI 789
Query: 1073 NQMLARSEEEFQTYQRIDAE 1092
+++L R E + D E
Sbjct: 790 DKLLDRDLVEAEEVSVDDEE 809
Score = 58 (25.5 bits), Expect = 3.4e-70, Sum P(2) = 3.4e-70
Identities = 27/90 (30%), Positives = 40/90 (44%)
Query: 1059 EDEEENA-VPDDETVN-QMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKE 1116
+DEEEN + + N + + +E QR+ AE + G R EL +K+
Sbjct: 806 DDEEENGFLKAFKVANFEYIDENEAAALEAQRVAAESKSSAGNSDRASYWEEL----LKD 861
Query: 1117 DEEIEQWAFEAKEEEKALHMGRGSRQRKQV 1146
E+ Q EE AL G+ R RKQ+
Sbjct: 862 KFELHQ-----AEELNAL--GKRKRSRKQL 884
Score = 37 (18.1 bits), Expect = 5.6e-68, Sum P(2) = 5.6e-68
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 1126 EAKEEEKALHM 1136
EAKEEEK +M
Sbjct: 1371 EAKEEEKPKNM 1381
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 600 (216.3 bits), Expect = 4.3e-70, Sum P(4) = 4.3e-70
Identities = 144/391 (36%), Positives = 226/391 (57%)
Query: 755 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHM 814
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+ +
Sbjct: 823 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFI 879
Query: 815 HTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSG 874
T+ + L+N ++ L+K CNHP++F + V +G G
Sbjct: 880 LTRNFEALNSK-----GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP--VLPNGSYDG 932
Query: 875 PDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKA 934
L + SGK LL ++L KL+ GHRVL+F QMT+++++LED+ Y G+KY R+DG
Sbjct: 933 SSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITG 992
Query: 935 EDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHR 994
R + + +FNAP ++ F F+LSTRAGGLG+NL TADTVII+DSDWNPH D+QA RAHR
Sbjct: 993 GLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHR 1052
Query: 995 IGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILH 1054
IGQ +V + R +T SVEERI A+ K+ + V++ G+ KS GS Q L IL
Sbjct: 1053 IGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGL-GSKS-GSMTKQELDDILK 1110
Query: 1055 -------QDDEE----DEEENAVP--DDETVNQMLARSEEEFQTYQRIDAERRKEQGKKS 1101
+DD E D E+++V DD ++++L R++ DA E +
Sbjct: 1111 FGTEELFKDDVEGDNKDVEDSSVIHYDDAAISKLLDRNQ---------DATDDTELQNMN 1161
Query: 1102 RLIEVSELPDWLIKEDEEIEQWAFEA-KEEE 1131
+ ++ ++++E++ +E+ E K+EE
Sbjct: 1162 EYLSSFKVAQYVVREEDGVEEVEREIIKQEE 1192
Score = 299 (110.3 bits), Expect = 3.1e-43, Sum P(4) = 3.1e-43
Identities = 63/163 (38%), Positives = 102/163 (62%)
Query: 655 KFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTG 714
KF+VLLT+YE + D+ L + W +++DE HR+KN+ K +LN++ + ++LLLTG
Sbjct: 734 KFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKI-DYKLLLTG 792
Query: 715 TPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 774
TPLQN L EL+ LLNFL P F ++ F + F ++++E+ I ++LH +
Sbjct: 793 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 839
Query: 775 LRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK 817
L P +LRRLK +V +P K E I++ ++S +QK Y+ + T+
Sbjct: 840 LGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR 882
Score = 219 (82.2 bits), Expect = 4.3e-70, Sum P(4) = 4.3e-70
Identities = 42/94 (44%), Positives = 56/94 (59%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKT+QTI + L ++ GP+L+ P
Sbjct: 614 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAP 673
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ 648
LST+ NW EFE WAP VV Y G R ++
Sbjct: 674 LSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 707
Score = 102 (41.0 bits), Expect = 3.1e-43, Sum P(4) = 3.1e-43
Identities = 32/119 (26%), Positives = 62/119 (52%)
Query: 1055 QDDEEDEEENAVP--DDETVNQMLARSEE-----EFQTYQRIDAERRKEQGKKSRLIEVS 1107
+ D +D E+++V DD ++++L R+++ E Q + + Q V
Sbjct: 1122 EGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVE 1181
Query: 1108 ELPDWLIKEDEEIEQ--WA------FEAKEEEKALHMGRGSRQRKQVDYTDSLTE-KEW 1157
E+ +IK++E ++ W +E ++E+ A ++G+G R RKQV+Y D+ E +EW
Sbjct: 1182 EVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEW 1240
Score = 49 (22.3 bits), Expect = 6.1e-37, Sum P(5) = 6.1e-37
Identities = 18/83 (21%), Positives = 43/83 (51%)
Query: 1055 QDDEEDEEENAVPDDETVNQMLARSEEE-FQTYQRIDAERRKEQGKKSRLIEVSE-LPDW 1112
Q+D+E ++E + D+++ + + E+E F+ +R + + + Q ++ + + LP
Sbjct: 1235 QEDQEWQDE--LSDNQSEYSIGSEDEDEDFE--ERPEGQSGRRQSRRQLKSDRDKPLPPL 1290
Query: 1113 LIKEDEEIEQWAFEAKEEEKALH 1135
L + IE F A++ + L+
Sbjct: 1291 LARVGGNIEVLGFNARQRKAFLN 1313
Score = 43 (20.2 bits), Expect = 2.5e-36, Sum P(5) = 2.5e-36
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 1028 EKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEE 1062
EK++ + T +E + ++T + D EEDEE
Sbjct: 1531 EKILDK--LETDDTKAEEKEPIETQQNGDKEEDEE 1563
Score = 39 (18.8 bits), Expect = 4.3e-70, Sum P(4) = 4.3e-70
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 1099 KKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEK 1132
+K ++++ E D +E E IE KEE++
Sbjct: 1529 EKEKILDKLETDDTKAEEKEPIETQQNGDKEEDE 1562
Score = 38 (18.4 bits), Expect = 4.3e-70, Sum P(4) = 4.3e-70
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 62 DSMKEQGLEEDPRYQKLIE 80
DS E+ +DP Y K+ E
Sbjct: 478 DSKSEKRKNKDPLYAKMEE 496
Score = 37 (18.1 bits), Expect = 6.1e-37, Sum P(5) = 6.1e-37
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 908 TQLMNILEDYFSYRGFKYM--RLDGTTKAEDRGDLLKKFNAPDSEYF 952
T+L N+ E S++ +Y+ DG + E +++K+ D +Y+
Sbjct: 1155 TELQNMNEYLSSFKVAQYVVREEDGVEEVER--EIIKQEENVDPDYW 1199
>UNIPROTKB|E1BYA8 [details] [associations]
symbol:ERCC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000303 "response to superoxide" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0006284
"base-excision repair" evidence=IEA] [GO:0006290 "pyrimidine dimer
repair" evidence=IEA] [GO:0007256 "activation of JNKK activity"
evidence=IEA] [GO:0007257 "activation of JUN kinase activity"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0008023 "transcription elongation factor complex"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling pathway in
response to DNA damage" evidence=IEA] [GO:0009636 "response to
toxic substance" evidence=IEA] [GO:0010165 "response to X-ray"
evidence=IEA] [GO:0010224 "response to UV-B" evidence=IEA]
[GO:0010332 "response to gamma radiation" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0032786 "positive
regulation of DNA-dependent transcription, elongation"
evidence=IEA] [GO:0045494 "photoreceptor cell maintenance"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0008630 GO:GO:0005730 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 GO:GO:0010332 GO:GO:0004386
GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 GO:GO:0032786 GO:GO:0006290 GO:GO:0007256
GeneTree:ENSGT00590000083118 OMA:NGEMQIF GO:GO:0000303
EMBL:AADN02027759 EMBL:AADN02027760 IPI:IPI00592927
Ensembl:ENSGALT00000010107 Uniprot:E1BYA8
Length = 1498
Score = 711 (255.3 bits), Expect = 4.6e-70, Sum P(5) = 4.6e-70
Identities = 167/497 (33%), Positives = 263/497 (52%)
Query: 556 KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKK-KVNG------- 607
KL +YQ G+ W+ L GIL DEMGLGKTIQ IA + L K + G
Sbjct: 501 KLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRYQG 560
Query: 608 --PFLIIVPLSTLSNWSLEFERWAPSVNV-VAYKGSPHLRKTLQAQMK-ASKFNVLLTTY 663
P +I+ P + + W EF W P V + ++ + K ++ + AS +L+T+Y
Sbjct: 561 LGPTVIVCPATVMHQWVKEFHTWWPPFRVAILHETGSYTNKKVKLIREIASCHGILITSY 620
Query: 664 EYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPE 723
Y+ + + W Y+I+DEGH+++N + +T F PHR++L+G+P+QN L E
Sbjct: 621 SYIRLMQDNIHSYDWHYVILDEGHKIRNPNAAVTLACKQFRT-PHRIILSGSPMQNNLKE 679
Query: 724 LWALLNFLLPSIFKSVSTFEQWFNAPFATTG----EKVELNEEETILIIRRLHKVLRPFL 779
LW+L +F+ P ++ F + F+ P G V++ + L + P+L
Sbjct: 680 LWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV--LRDAINPYL 737
Query: 780 LRRLKKEVESQL--PDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXX 837
LRR+K +V+ L PDK E ++ C ++ Q+ +Y++ D E
Sbjct: 738 LRRMKADVKMSLSLPDKNEQVLFCRLTDEQRQVYQNF-------IDSKEVYQILNGDMQ- 789
Query: 838 LMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDL--YRVSGKFELLDRILPKLK 895
+ + +V LRK+CNHP +F K V + + ++ SGK +++ +L
Sbjct: 790 VFSGLVALRKICNHPDLFSG-GPKILKCVPDADLEEADQFGYWKRSGKMIVVESLLKIWH 848
Query: 896 STGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
GHRVL F Q Q++ ILE + R + Y+R+DGTT R L+ ++N D FIF+
Sbjct: 849 KQGHRVLFFTQSRQMLQILEVFLRDRNYSYLRMDGTTTIASRQPLITRYNE-DKSIFIFL 907
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L+TR GG+G+NL AD VII+D DWNP D QA++RA RIGQK +V V RL+T ++EE+
Sbjct: 908 LTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 967
Query: 1016 ILAAARYKLNMDEKVIQ 1032
I +K + +V++
Sbjct: 968 IYHRQIFKQFLTNRVLK 984
Score = 64 (27.6 bits), Expect = 4.6e-70, Sum P(5) = 4.6e-70
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 265 TTLETAVNVKAYKRTKRQGLKEARATEK-LEKQQKVEAERKKRQKHQ 310
T T + K ++T+R L EA EK L Q K+ +ERKK H+
Sbjct: 249 TPFGTKIPQKPERKTRRLMLNEASDFEKYLADQAKLSSERKKLALHK 295
Score = 56 (24.8 bits), Expect = 4.6e-70, Sum P(5) = 4.6e-70
Identities = 33/136 (24%), Positives = 62/136 (45%)
Query: 1027 DEKVIQAGMFDQKSTGSERHQFLQTIL--HQDDEEDE---EENAVPDDETVNQMLARSEE 1081
D+ ++ G+ +KS+ + + + L H+ + + E A + ET +Q + +++
Sbjct: 1041 DDDTLKGGLHLKKSSSPKYSKSSSSHLTRHRANSSEAIETSEEAKGNLETFDQN-SYAKD 1099
Query: 1082 EFQTYQRIDAERRKEQGKKSRL-IEVSE-LPDWL-----IKEDEEIEQWAFEAKEEEKAL 1134
+T I++ + +Q R I +S+ LP K EE + A E E + +L
Sbjct: 1100 NAETATDINSVNKSKQESLERADISLSQSLPGGAGSSENAKVTEEEHEVANENAEGDFSL 1159
Query: 1135 HMGRGSRQRKQVDYTD 1150
G Q KQVD T+
Sbjct: 1160 LCGAAGSQEKQVDKTE 1175
Score = 49 (22.3 bits), Expect = 3.2e-68, Sum P(4) = 3.2e-68
Identities = 21/67 (31%), Positives = 29/67 (43%)
Query: 245 KVLNFQRQLRAE--VIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAE 302
K L Q +L +E +A +R A NV+ T K +A K +K+ K
Sbjct: 276 KYLADQAKLSSERKKLALHKRVKKKAQAKNVQCVAPTSATKEKRGKALSKTDKRLKKHL- 334
Query: 303 RKKRQKH 309
KK QKH
Sbjct: 335 -KKLQKH 340
Score = 43 (20.2 bits), Expect = 4.6e-70, Sum P(5) = 4.6e-70
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 49 NPQE-NLTALQRAIDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSA--QVQQLRFQ 103
+PQ N + R +DS+K Q ++ + +K I+ K R + T +V ++ F+
Sbjct: 161 SPQATNNKDINRKLDSVKRQKYNKEQQLKK-IKAKQKRLQAVLGGTEILDKVNEIEFE 217
Score = 40 (19.1 bits), Expect = 4.6e-70, Sum P(5) = 4.6e-70
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 461 GKVLKGEDAPLAAHLKQWIQDH 482
GK L D L HLK+ +Q H
Sbjct: 320 GKALSKTDKRLKKHLKK-LQKH 340
Score = 37 (18.1 bits), Expect = 5.0e-68, Sum P(5) = 5.0e-68
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 1037 DQKSTGSER--HQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDA 1091
D K G ER H Q ++D E++E + +D+ V + L + + + DA
Sbjct: 1213 DAKFEG-ERIPHLVKQKRYKKEDSEEKELDPKKNDDYVLEKLFKKTVGVHSVMKHDA 1268
>DICTYBASE|DDB_G0292948 [details] [associations]
symbol:isw "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0016587 "Isw1
complex" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0292948 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0003677 EMBL:AAFI02000197
GO:GO:0016887 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016587 KO:K11654 SUPFAM:SSF101224
RefSeq:XP_629432.1 ProteinModelPortal:Q54CI4 STRING:Q54CI4
PRIDE:Q54CI4 EnsemblProtists:DDB0231763 GeneID:8628951
KEGG:ddi:DDB_G0292948 InParanoid:Q54CI4 OMA:IREANAF
ProtClustDB:CLSZ2728711 Uniprot:Q54CI4
Length = 1221
Score = 698 (250.8 bits), Expect = 3.5e-69, Sum P(3) = 3.5e-69
Identities = 143/317 (45%), Positives = 198/317 (62%)
Query: 546 TEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKV 605
T + +G +++YQ+ GL W++ L+ +NGILADEMGLGKT+QTI+L+ YL E K +
Sbjct: 265 TSSPPYIKSGTMRDYQVYGLNWLIQLYERGINGILADEMGLGKTLQTISLLGYLSEYKGI 324
Query: 606 NGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA-QMKASKFNVLLTTYE 664
GP LII P STLS W+ EF RW P + VV + GS R+ ++ Q+ KF+V +TTYE
Sbjct: 325 RGPHLIIAPKSTLSGWAKEFTRWCPFLRVVRFHGSKEEREDIKKNQLIFKKFDVCITTYE 384
Query: 665 YVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPEL 724
I++K K W+Y+IIDE HR+KN + L+ + F + RLL+TGTPLQN L EL
Sbjct: 385 VAIREKSTFKKFSWRYIIIDEAHRIKNENSVLSKGVRMFN-SQFRLLITGTPLQNNLHEL 443
Query: 725 WALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 784
W+LLNFLLP +F S F++WF+ A E N++E +I +LHKVLRPFLLRR+K
Sbjct: 444 WSLLNFLLPDVFSSSDDFDKWFD--LANNTE----NQQE---VIDKLHKVLRPFLLRRIK 494
Query: 785 KEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQ 844
EVE LP K E + +S +QK Y+ + +K + D L+N +Q
Sbjct: 495 TEVEKSLPPKKEIKLFVGLSTMQKEWYKRLLSKDL---DAVVVGAKGNTGRVRLLNICMQ 551
Query: 845 LRKLCNHPFMFQNIEEK 861
LRK CNHP++F EE+
Sbjct: 552 LRKACNHPYLFDGAEEE 568
Score = 654 (235.3 bits), Expect = 6.3e-64, Sum P(3) = 6.3e-64
Identities = 137/323 (42%), Positives = 199/323 (61%)
Query: 760 NEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI 819
N E +I +LHKVLRPFLLRR+K EVE LP K E + +S +QK Y+ + +K +
Sbjct: 470 NTENQQEVIDKLHKVLRPFLLRRIKTEVEKSLPPKKEIKLFVGLSTMQKEWYKRLLSKDL 529
Query: 820 LLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYR 879
D L+N +QLRK CNHP++F EE+ + G ++
Sbjct: 530 ---DAVVVGAKGNTGRVRLLNICMQLRKACNHPYLFDGAEEE--PYTTGEHLIDN----- 579
Query: 880 VSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGD 939
SGK LLD++L KLK G RVL+F QM+++++ILEDY YRG+KY R+DG+T++ R +
Sbjct: 580 -SGKMALLDKLLKKLKERGSRVLIFSQMSRMLDILEDYMLYRGYKYARIDGSTESIVREN 638
Query: 940 LLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKN 999
++ +N P S+ F F+L+TRAGGLG+ L TAD VI+FDSDWNP DLQAQDRAHRIGQ
Sbjct: 639 SIENYNKPGSDLFAFLLTTRAGGLGITLNTADIVILFDSDWNPQMDLQAQDRAHRIGQTK 698
Query: 1000 EVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEE 1059
V V R +T NS+EE+++ A KL +D VIQ G + + ++ + L + D+
Sbjct: 699 PVTVYRFVTENSMEEKMVEKAEMKLQLDALVIQQGRLVEANKNAKPEELLAMLRFGADDI 758
Query: 1060 DEEENAVPDDETVNQMLARSEEE 1082
+ +++ DE ++ +L + EE+
Sbjct: 759 FKSKSSTITDEDIDSILKKGEEK 781
Score = 71 (30.1 bits), Expect = 3.5e-69, Sum P(3) = 3.5e-69
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 1246 KLPSRKELPDYYEVIDRPMDIKKILGRIEDGKYSSVDELQKDFKTLCRNAQIYNEELSLI 1305
+LP +E PD+ ++ D+K+ L I+ G + D + DF+T R ++Y +
Sbjct: 900 ELPEEEEEPDFGDLSKEEQDLKERL--IKTGGFG--DWSKTDFRTFIRGCELYGRKA--- 952
Query: 1306 HEDSVVLESVFTKARQRVE 1324
++ + E V TK + V+
Sbjct: 953 YQS--IAEEVQTKTEKEVQ 969
Score = 54 (24.1 bits), Expect = 2.1e-67, Sum P(3) = 2.1e-67
Identities = 34/154 (22%), Positives = 64/154 (41%)
Query: 980 WNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQK 1039
W H ++ ++ +K E R+++ + +YK E IQ G+ K
Sbjct: 976 WKKHSEVADHEKLVARIEKGEERIMKYKETQ--DSLNYKINKYKNPWIELKIQYGLKKNK 1033
Query: 1040 STGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEE-EFQTYQRIDAERRKEQG 1098
+ E FL + H+ EE + + + +S + F + + R Q
Sbjct: 1034 NYNDEEDIFLVCMCHRLGYGAFEE--------LKEEIRKSPQFRFDWF----IQTRTCQE 1081
Query: 1099 KKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEK 1132
K+R V +L ++IKE +E + A EA++ +K
Sbjct: 1082 LKAR---VDQLLKYIIKEHQEEVEAAKEAEKRKK 1112
Score = 52 (23.4 bits), Expect = 3.5e-69, Sum P(3) = 3.5e-69
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 262 RRDTTLETAVNVKAYK-RTKRQGLKEARATEKLEKQQKVEAERKKRQKHQE 311
R+D T E A N + R +++ LK+ R E+ KQ + E E+ +RQ+ QE
Sbjct: 119 RKDET-EEARNERLESIRLEKERLKQIR--EQQRKQLQ-ELEKNQRQQLQE 165
Score = 50 (22.7 bits), Expect = 5.6e-69, Sum P(3) = 5.6e-69
Identities = 18/85 (21%), Positives = 37/85 (43%)
Query: 263 RDTTLETA-VNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYI---TTVLQ 318
R+ LE+ + + K+ + Q K+ + EK ++QQ E + K +Y+ T +
Sbjct: 127 RNERLESIRLEKERLKQIREQQRKQLQELEKNQRQQLQEDKEKSANARLKYLLERTEIFT 186
Query: 319 HCKDFKEYHRNNQARIMRLNKAVMN 343
H + NN + + V++
Sbjct: 187 HF--VSNSNNNNNTKKTKTKSPVLS 209
Score = 49 (22.3 bits), Expect = 7.1e-69, Sum P(3) = 7.1e-69
Identities = 16/72 (22%), Positives = 33/72 (45%)
Query: 264 DTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDF 323
D T++ +N K R E + +LEK++ + ++R++ QE Q ++
Sbjct: 110 DPTIQNGINRKDETEEARN---ERLESIRLEKERLKQIREQQRKQLQELEKNQRQQLQED 166
Query: 324 KEYHRNNQARIM 335
KE N + + +
Sbjct: 167 KEKSANARLKYL 178
Score = 44 (20.5 bits), Expect = 2.3e-66, Sum P(3) = 2.3e-66
Identities = 22/91 (24%), Positives = 39/91 (42%)
Query: 1070 ETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKE 1129
+TV +A EE + ERR + K++ + + P L + E+ E A+ K
Sbjct: 832 KTVAGTVAADEEIAPAKPVVKRERRFNKPKQTPIYDFQFYPPRLTQLYEK-ENEAYNKKV 890
Query: 1130 E-EKALHMGRGSRQRKQVDYTDSLTEKEWLK 1159
E G + ++ D+ D E++ LK
Sbjct: 891 EWYDQKDKGELPEEEEEPDFGDLSKEEQDLK 921
Score = 43 (20.2 bits), Expect = 8.8e-67, Sum P(4) = 8.8e-67
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 1116 EDEEIEQWAFEAKEEEKALHMGRGSRQRK 1144
E+EE E+ E +EEE+ + + RQ K
Sbjct: 1193 EEEEEEEEEVEEEEEEEEVKVPLKKRQVK 1221
Score = 43 (20.2 bits), Expect = 8.8e-67, Sum P(4) = 8.8e-67
Identities = 9/35 (25%), Positives = 22/35 (62%)
Query: 1069 DETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRL 1103
D+ + ++ +EE + + +AE+RK++ +K +L
Sbjct: 1087 DQLLKYIIKEHQEEVEAAK--EAEKRKKEKEKLKL 1119
Score = 42 (19.8 bits), Expect = 1.1e-66, Sum P(4) = 1.1e-66
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 1094 RKEQGKKSRLIEVSELPDW 1112
++EQ K RLI+ DW
Sbjct: 915 KEEQDLKERLIKTGGFGDW 933
Score = 41 (19.5 bits), Expect = 4.9e-68, Sum P(3) = 4.9e-68
Identities = 14/66 (21%), Positives = 29/66 (43%)
Query: 179 ISSQIKQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAE 238
I + I + T + E L+ + + +ER ++ ++++EL + L E A
Sbjct: 113 IQNGINRKDETEEARNERLESIRLEKERLKQIREQQRKQLQELEKNQRQQLQEDKEKSAN 172
Query: 239 IELRAL 244
L+ L
Sbjct: 173 ARLKYL 178
Score = 40 (19.1 bits), Expect = 6.1e-66, Sum P(3) = 6.1e-66
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 1057 DEEDEEENAVPDDE 1070
+EE+EEE V ++E
Sbjct: 1193 EEEEEEEEEVEEEE 1206
Score = 38 (18.4 bits), Expect = 9.9e-66, Sum P(3) = 9.9e-66
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 1056 DDEEDEEENAVP 1067
++EE+EEE VP
Sbjct: 1203 EEEEEEEEVKVP 1214
>ZFIN|ZDB-GENE-070705-296 [details] [associations]
symbol:si:dkey-148b12.1 "si:dkey-148b12.1"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 ZFIN:ZDB-GENE-070705-296 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 HOVERGEN:HBG056329 KO:K11727 OrthoDB:EOG44J2H9
EMBL:CR848717 EMBL:CU104724 IPI:IPI00488326 RefSeq:NP_001093467.1
UniGene:Dr.81160 SMR:A5WUY4 Ensembl:ENSDART00000020725
GeneID:559803 KEGG:dre:559803 OMA:IGHAWIN NextBio:20883144
Uniprot:A5WUY4
Length = 1036
Score = 697 (250.4 bits), Expect = 3.5e-69, Sum P(2) = 3.5e-69
Identities = 144/314 (45%), Positives = 199/314 (63%)
Query: 547 EQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVN 606
E S + NG L++YQI+GL WM+SL+ N +NGILADEMGLGKT+QTIAL+ YL + +
Sbjct: 133 ESPSYIKNGTLRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTIALLGYLKHYRNIP 192
Query: 607 GPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEY 665
GP +++VP STL NW EF+RW P++ V G+ R ++ M +++V +T+YE
Sbjct: 193 GPHMVLVPKSTLHNWMNEFKRWVPTLKAVCLIGNKDERAAFIRDVMMPGEWDVCVTSYEM 252
Query: 666 VIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELW 725
VI++K K +W+Y++IDE HR+KN KL+ I F +RLLLTGTPLQN L ELW
Sbjct: 253 VIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIAREFKTT-NRLLLTGTPLQNNLHELW 311
Query: 726 ALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 785
+LLNFLLP +F S S F+ WF+ L +++ ++ RLH VLRPFLLRR+K
Sbjct: 312 SLLNFLLPDVFNSASDFDSWFDTNC--------LGDQK---LVERLHAVLRPFLLRRIKA 360
Query: 786 EVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQL 845
EVE LP K E +K + GL K + R +T+ IL+ D L+N ++QL
Sbjct: 361 EVEKSLPPKKE--VKIYL-GLSK-MQREWYTR-ILMKDIDILNSAGKMDKMRLLNILMQL 415
Query: 846 RKLCNHPFMFQNIE 859
RK CNHP++F E
Sbjct: 416 RKCCNHPYLFDGAE 429
Score = 651 (234.2 bits), Expect = 3.0e-60, Sum P(2) = 3.0e-60
Identities = 146/317 (46%), Positives = 197/317 (62%)
Query: 767 IIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
++ RLH VLRPFLLRR+K EVE LP K E +K + GL K + R +T+ IL+ D
Sbjct: 342 LVERLHAVLRPFLLRRIKAEVEKSLPPKKE--VKIYL-GLSK-MQREWYTR-ILMKDIDI 396
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFEL 886
L+N ++QLRK CNHP++F E G + L SGK
Sbjct: 397 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP-------GPPYTTDTHLVINSGKMVA 449
Query: 887 LDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNA 946
LD++LPK++ G RVL+F QMT++++ILEDY +RGF+Y RLDG T E R + FNA
Sbjct: 450 LDKLLPKVQEQGSRVLIFSQMTRVLDILEDYCMWRGFEYCRLDGNTPHEAREQAIDAFNA 509
Query: 947 PDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 1006
P+S FIF+LSTRAGGLG+NL TAD VI++DSDWNP DLQA DRAHRIGQ+ V+V RL
Sbjct: 510 PNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQRKPVKVFRL 569
Query: 1007 MTVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEENA 1065
+T N+VEERI+ A KL +D VIQ G + DQ++ + + LQ I H +++
Sbjct: 570 ITDNTVEERIVERAEMKLRLDSIVIQQGRLIDQQNKLG-KDEMLQMIRHGATHVFASKDS 628
Query: 1066 VPDDETVNQMLARSEEE 1082
DE ++ +L R ++
Sbjct: 629 ELTDEDIDTILERGAKK 645
Score = 73 (30.8 bits), Expect = 3.5e-69, Sum P(2) = 3.5e-69
Identities = 42/178 (23%), Positives = 80/178 (44%)
Query: 980 WNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQK 1039
W +LQ ++ ++ E R+ R +++ + + ARYK + IQ G K
Sbjct: 873 WERCNELQDIEKIMAQIERGEARIQRRISIKKALD--VKIARYKAPFHQLRIQYGTNKGK 930
Query: 1040 STGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKE-QG 1098
+ E +FL +LH+ + E E + Q + R+ +F+ I + E Q
Sbjct: 931 NYTEEEDRFLICMLHKMGFDKEYVY-----EELRQCV-RNAPQFRFDWFIKSRTAMELQR 984
Query: 1099 KKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKE 1156
+ + LI + E KE+ EIE+ E E+++ G+ +++RK + + EK+
Sbjct: 985 RCNTLISLIE------KENMEIEEK--ERAEKKRRTPKGQSAQKRK-AEVSSEKKEKK 1033
Score = 41 (19.5 bits), Expect = 8.3e-66, Sum P(2) = 8.3e-66
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E + DI+KI+ +IE G+
Sbjct: 872 FWERCNELQDIEKIMAQIERGE 893
>ASPGD|ASPL0000018137 [details] [associations]
symbol:AN4187 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005576
"extracellular region" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 EMBL:BN001302
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI
InterPro:IPR022707 Pfam:PF12054 EMBL:AACD01000068 OrthoDB:EOG44XNQZ
RefSeq:XP_661791.1 ProteinModelPortal:Q5B5J3 STRING:Q5B5J3
EnsemblFungi:CADANIAT00004481 GeneID:2873610 KEGG:ani:AN4187.2
Uniprot:Q5B5J3
Length = 1904
Score = 474 (171.9 bits), Expect = 7.2e-69, Sum P(2) = 7.2e-69
Identities = 113/316 (35%), Positives = 166/316 (52%)
Query: 551 ILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALI-------------T 597
+ + +L+ YQ +G+ W+ L NL+GIL D+MGLGKT+QTI ++ T
Sbjct: 1312 VAIKAELRPYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTICIVASDHHMRAEDFAKT 1371
Query: 598 YLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFN 657
E +KV P LII P S +W E +++AP +N VAY G P R LQ + + +
Sbjct: 1372 QRPESRKV--PSLIICPPSLSGHWQQEVKQYAPFLNCVAYVGPPAERSKLQGSLADA--D 1427
Query: 658 VLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPL 717
+++T+Y+ D L + W Y ++DEGH +KN K+T + + HRL+L+GTP+
Sbjct: 1428 IVVTSYDICRNDNDVLRPISWNYCVLDEGHLIKNPKAKVTMAVKRIN-SNHRLILSGTPI 1486
Query: 718 QNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEET-ILIIRRLHKVLR 776
QN + ELW+L +FL+P + F F P AT+ E+E L I LHK +
Sbjct: 1487 QNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIATSRFSKSSKEQEAGALAIEALHKQVL 1546
Query: 777 PFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXX 836
PFLLRRLK+EV + LP K+ CD S LQK L+ TK +
Sbjct: 1547 PFLLRRLKEEVLNDLPPKIIQNYYCDPSELQKKLFEDF-TKKEQKALQEKMGSSEKADKE 1605
Query: 837 XLMNTIVQLRKLCNHP 852
+ + +R+LCN P
Sbjct: 1606 HIFQALQYMRRLCNSP 1621
Score = 323 (118.8 bits), Expect = 7.2e-69, Sum P(2) = 7.2e-69
Identities = 82/216 (37%), Positives = 124/216 (57%)
Query: 899 HRVLLFCQMTQLMNILEDYFSYR---GFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
HR L+FCQM ++++I++ + +++RLDG +A R D++ +FN+ D Y + +
Sbjct: 1686 HRALVFCQMKEMLDIVQSEVLQKLLPSVQFLRLDGAVEATRRQDIVNRFNS-DPSYDVLL 1744
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L+T GGLGLNL ADTVI + DWNP +D+QA DRAHRIGQK V V RL+T ++EE+
Sbjct: 1745 LTTSVGGLGLNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEK 1804
Query: 1016 ILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQM 1075
IL R+K+++ V+ +Q++ G Q +L + + ENA E
Sbjct: 1805 ILNLQRFKIDVASTVV-----NQQNAGLNTMDTDQ-LLDLFNLGETAENAEKPTE----- 1853
Query: 1076 LARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPD 1111
+ E + ID E KE+GKK L ++ EL D
Sbjct: 1854 IGGKEVDMVD---IDGEL-KEKGKKGWLDDLGELWD 1885
Score = 44 (20.5 bits), Expect = 2.9e-23, Sum P(2) = 2.9e-23
Identities = 10/13 (76%), Positives = 10/13 (76%)
Query: 884 FELLDRILPKLKS 896
F LL RILP LKS
Sbjct: 40 FNLLGRILPYLKS 52
>POMBASE|SPBC1826.01c [details] [associations]
symbol:mot1 "TATA-binding protein associated factor
Mot1 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0017025 "TBP-class
protein binding" evidence=ISO] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC1826.01c GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0006355 GO:GO:0003677 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 GO:GO:0006366 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI InterPro:IPR022707
Pfam:PF12054 GO:GO:0017025 EMBL:AB027981 PIR:T39739
RefSeq:NP_596080.2 ProteinModelPortal:O43065 STRING:O43065
EnsemblFungi:SPBC1826.01c.1 GeneID:2539633 KEGG:spo:SPBC1826.01c
OrthoDB:EOG44XNQZ NextBio:20800788 Uniprot:O43065
Length = 1953
Score = 482 (174.7 bits), Expect = 1.2e-68, Sum P(2) = 1.2e-68
Identities = 127/374 (33%), Positives = 198/374 (52%)
Query: 553 VNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALIT---YLMEK------- 602
++ L++YQ +G+ W+ L L+GIL D+MGLGKT+QTI ++ Y +K
Sbjct: 1354 ISADLRKYQQEGVNWLAFLNKYELHGILCDDMGLGKTLQTICIVASDHYNRQKLFEESGS 1413
Query: 603 -KKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLT 661
K + P LI+ P + +W E +AP + V AY G P R ++++MK S +V++T
Sbjct: 1414 PKFAHVPSLIVCPSTLAGHWQQELSTYAPFLKVSAYVGPPAERAKIRSKMKKS--DVVVT 1471
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
+Y+ D L K+ W Y ++DEGH +KN KLT + + + HRL+L+GTP+QN +
Sbjct: 1472 SYDICRNDVDELVKIDWNYCVLDEGHVIKNARAKLTKAVKSLR-SYHRLILSGTPIQNNV 1530
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFNAPFATTGE-KVELNEEET-ILIIRRLHKVLRPFL 779
ELW+L +FL+P + TF++ F P A + + K E E L + +HK + PF+
Sbjct: 1531 LELWSLFDFLMPGFLGTEKTFQERFVRPIAASRDAKSSSKERERGTLALEAIHKQVLPFM 1590
Query: 780 LRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYR----HMHTKGILLTDGSEXXXXXX--- 832
LRRLK++V + LP K+ CDMS LQ+ L ++ L D +E
Sbjct: 1591 LRRLKEDVLADLPPKIIQDYYCDMSDLQRKLLNDFVSQLNINEELEDDETEKTQGTRKKK 1650
Query: 833 XXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRV-SGKFELLDRIL 891
+ + +RKLCNHP + + EK H + IV L + SG +L +
Sbjct: 1651 SQKAHIFQALQYMRKLCNHPALI--LTEK---HPKRNAIVK--QLAKENSGLHDL--KHA 1701
Query: 892 PKLKSTGHRVLLFC 905
PKL + G ++L C
Sbjct: 1702 PKLTALG-QLLRDC 1714
Score = 313 (115.2 bits), Expect = 1.2e-68, Sum P(2) = 1.2e-68
Identities = 70/169 (41%), Positives = 99/169 (58%)
Query: 899 HRVLLFCQMTQLMNILE-DYF--SYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
HRVL+FCQ+ +++++E D + YMRLDG+ + R + + KFN D + +
Sbjct: 1737 HRVLIFCQLKDMLDMVEKDLLQATMPDVTYMRLDGSVEPTKRQEAVTKFNN-DPSIDVLL 1795
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L+T GGLGLNL ADTVI + DWNP +DLQA DRAHRIGQK V V RL+T +EE+
Sbjct: 1796 LTTHVGGLGLNLTGADTVIFVEHDWNPMRDLQAMDRAHRIGQKKVVNVYRLITRGCLEEK 1855
Query: 1016 ILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEEN 1064
I+ R+K+N+ V+ S G++ Q L DE+ +N
Sbjct: 1856 IMGLQRFKMNVASTVVNQQNAGLSSIGTD--QILDLFNTTADEQQTVQN 1902
Score = 39 (18.8 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 21/87 (24%), Positives = 41/87 (47%)
Query: 838 LMNTIVQLRKLCNHPFMFQNIEE----KFSDHVGGSGIVSGPDLYRVSGKFELLDRILPK 893
L+NT++ L NH + + +D + + S +L +V ++ LD +
Sbjct: 519 LINTVIH--GLANHDDDVRAVSALTLLPIADKLVQEKLSSCKNLLKVL--WDCLDDVKDD 574
Query: 894 LKSTGHRV--LL--FCQMTQLMNILED 916
L S+ V LL C T++MN++++
Sbjct: 575 LSSSTSCVMDLLSSLCSFTEVMNLMQE 601
Score = 38 (18.4 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 790 QLPDKVEYIIKCDMSGLQKVLYR--HMHTKGILL 821
+LP K+ IIK M ++K + MH+ ++
Sbjct: 991 KLPKKLNSIIKGIMESIKKEQFSCLQMHSASAMM 1024
Score = 38 (18.4 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 19/68 (27%), Positives = 29/68 (42%)
Query: 680 YMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSV 739
Y+II RM + + + T + +L+ PL+ LP+ L +LL S K
Sbjct: 1278 YLIIPLLGRMSDADQDVRVLATTSFATLVKLV----PLEAGLPDPPDLPQYLLDSREKER 1333
Query: 740 STFEQWFN 747
EQ N
Sbjct: 1334 KFLEQMLN 1341
Score = 37 (18.1 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 884 FELLDRILPKLKS 896
+ LL R++P LKS
Sbjct: 40 YNLLGRVVPYLKS 52
>SGD|S000000017 [details] [associations]
symbol:FUN30 "Snf2p family member with ATP-dependent
chromatin remodeling activity" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0070870
"heterochromatin maintenance involved in chromatin silencing"
evidence=IGI;IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=IMP] [GO:0031934 "mating-type region
heterochromatin" evidence=IPI] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IMP] [GO:0006348 "chromatin silencing
at telomere" evidence=IMP] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0070869 "heterochromatin assembly
involved in chromatin silencing" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
SGD:S000000017 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0000775 EMBL:L05146 EMBL:BK006935 GO:GO:0003677 GO:GO:0003682
GO:GO:0030466 GO:GO:0000183 GO:GO:0006348 GO:GO:0004386
GO:GO:0031934 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0070869 GO:GO:0000729
GO:GO:0008094 OrthoDB:EOG4BCHW4 KO:K14439 HOGENOM:HOG000195581
PIR:S22266 RefSeq:NP_009383.1 ProteinModelPortal:P31380 SMR:P31380
DIP:DIP-2541N IntAct:P31380 MINT:MINT-425278 STRING:P31380
PaxDb:P31380 PeptideAtlas:P31380 EnsemblFungi:YAL019W GeneID:851214
KEGG:sce:YAL019W CYGD:YAL019w GeneTree:ENSGT00630000089890
OMA:KIEPYYG NextBio:968097 Genevestigator:P31380 GermOnline:YAL019W
GO:GO:0070870 Uniprot:P31380
Length = 1131
Score = 456 (165.6 bits), Expect = 1.5e-68, Sum P(2) = 1.5e-68
Identities = 118/324 (36%), Positives = 174/324 (53%)
Query: 557 LKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVN--GPFLIIVP 614
LK+YQ G+ W+ L+ N ++ ILAD+MGLGKT Q I+ YL K++N GP L++VP
Sbjct: 572 LKDYQQTGINWLNLLYQNKMSCILADDMGLGKTCQVISFFAYL---KQINEPGPHLVVVP 628
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ--AQMKASKFNVLLTTYEYVIKDKGP 672
STL NW EF+++AP++ + Y GS R+ L+ + A K++V++TTY +K
Sbjct: 629 SSTLENWLREFQKFAPALKIEPYYGSLQEREELRDILERNAGKYDVIVTTYNLAAGNKYD 688
Query: 673 LAKL---HWKYMIIDEGHRMKN----HHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELW 725
++ L ++ ++ DEGH +KN KL I F RLLLTGTPLQN L EL
Sbjct: 689 VSFLKNRNFNVVVYDEGHMLKNSTSERFAKLMKIRANF-----RLLLTGTPLQNNLKELM 743
Query: 726 ALLNFLLPSIFKSVS-TFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 784
+LL F++P++F S +F+ F TT + N I R +++PF+LRR K
Sbjct: 744 SLLEFIMPNLFISKKESFDAIFKQRAKTTDDNKNHNPLLAQEAITRAKTMMKPFILRRRK 803
Query: 785 KEVESQLPDKVEYIIKCDMSGLQKVLY----------RHMHTKGILLTDGSEXXXXXXXX 834
+V LP K +I C+++ +QK +Y + M G L D E
Sbjct: 804 DQVLKHLPPKHTHIQYCELNAIQKKIYDKEIQIVLEHKRMIKDGELPKDAKEKSKLQSSS 863
Query: 835 XXXLMNTIVQLRKLCNHPFMFQNI 858
N I+ LRK HP +F+NI
Sbjct: 864 SK---NLIMALRKASLHPLLFRNI 884
Score = 331 (121.6 bits), Expect = 1.5e-68, Sum P(2) = 1.5e-68
Identities = 84/223 (37%), Positives = 127/223 (56%)
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKL-KSTGH 899
T +L KLC + F N K+ H D + SGK + L ++L +
Sbjct: 920 TDFELHKLCCN---FPNTLSKYQLH---------NDEWMQSGKIDALKKLLKTIIVDKQE 967
Query: 900 RVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTR 959
+VL+F TQ+++ILE S +K++RLDG+T+ DR L+ KF D + IF+LST+
Sbjct: 968 KVLIFSLFTQVLDILEMVLSTLDYKFLRLDGSTQVNDRQLLIDKFYE-DKDIPIFILSTK 1026
Query: 960 AGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAA 1019
AGG G+NL A+ VIIFD +NPH D QA DRAHR+GQ EV + L+T +S+EE+I
Sbjct: 1027 AGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQL 1086
Query: 1020 ARYKLNMDEKVIQAGMFDQKSTG---SERHQFLQTILHQDDEE 1059
A+ KL +D + + D+KS S+ L+ I++ ++ +
Sbjct: 1087 AKNKLALDSYISE----DKKSQDVLESKVSDMLEDIIYDENSK 1125
>CGD|CAL0002614 [details] [associations]
symbol:orf19.4502 species:5476 "Candida albicans" [GO:0000228
"nuclear chromosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045898 "regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0042790 "transcription of nuclear large rRNA transcript from
RNA polymerase I promoter" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 CGD:CAL0002614 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K15192 InterPro:IPR022707 Pfam:PF12054 EMBL:AACQ01000142
EMBL:AACQ01000141 RefSeq:XP_712896.1 RefSeq:XP_712928.1
ProteinModelPortal:Q59TC9 STRING:Q59TC9 GeneID:3645462
GeneID:3645500 KEGG:cal:CaO19.11978 KEGG:cal:CaO19.4502
Uniprot:Q59TC9
Length = 1915
Score = 488 (176.8 bits), Expect = 1.8e-68, Sum P(3) = 1.8e-68
Identities = 116/332 (34%), Positives = 185/332 (55%)
Query: 551 ILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALIT---YLMEKK-KVN 606
+ + L++YQ +G+ W+ L +L+GIL D+MGLGKT+QTI +++ ++ E+ K
Sbjct: 1296 VTIKATLRKYQQEGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIVSSDHHIREENFKET 1355
Query: 607 G-------PFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVL 659
G P L+I P S + +W E ++AP + V+ Y GSP +R L+ Q+ + +V+
Sbjct: 1356 GSAEYRKLPSLVICPPSLIGHWEQEINQYAPFMKVLVYAGSPSIRIPLRGQIPDA--DVV 1413
Query: 660 LTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQN 719
+T+Y+ D L K + Y ++DEGH +KN KL+ + A HRL+L+GTP+QN
Sbjct: 1414 VTSYDVCRNDVESLTKHDYNYCVLDEGHIIKNASSKLSKSVKRVK-AEHRLILSGTPIQN 1472
Query: 720 KLPELWALLNFLLPSIFKSVSTFEQWFNAPFATT-GEKVELNEEET-ILIIRRLHKVLRP 777
+ ELW+L +FL+P + F + F P A + K E+E L + LHK + P
Sbjct: 1473 NVLELWSLFDFLMPGFLGTEKVFHEKFAKPIAASRNSKTSSKEQEAGALAMESLHKQVLP 1532
Query: 778 FLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHT--KGILLTD--GSEXXXXXXX 833
F+LRRLK++V S LP K+ C++S LQK LY+ K + TD GSE
Sbjct: 1533 FMLRRLKEDVLSDLPPKIIQDYYCELSDLQKKLYKDFAKTQKETIKTDVQGSEKEGKTH- 1591
Query: 834 XXXXLMNTIVQLRKLCNHPFMFQNIEE-KFSD 864
+ + +RKLCNHP + + + K+++
Sbjct: 1592 ----VFQALQYMRKLCNHPALVMSEQHPKYAE 1619
Score = 316 (116.3 bits), Expect = 1.8e-68, Sum P(3) = 1.8e-68
Identities = 60/136 (44%), Positives = 91/136 (66%)
Query: 899 HRVLLFCQMTQLMNILEDYFSYR---GFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
HR L+FCQ+ +++I+E+ + +MRLDG+T DR +++KFN D + +
Sbjct: 1687 HRALIFCQLKDMLDIVENELLRKYLPSVTFMRLDGSTDPRDRQSIVRKFNE-DPSIDVLL 1745
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L+T+ GGLGLNL ADTVI + DWNP DLQA DRAHR+GQK V V RL+T +++EE+
Sbjct: 1746 LTTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRLGQKKVVNVYRLITKDTLEEK 1805
Query: 1016 ILAAARYKLNMDEKVI 1031
I+ ++K+N+ ++
Sbjct: 1806 IMGLQKFKMNIASTIV 1821
Score = 43 (20.2 bits), Expect = 2.2e-21, Sum P(3) = 2.2e-21
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 557 LKEYQIKGLEWMVSLFNNNLNGILADEMGL 586
LKE +K E +V+L + +LN +L + L
Sbjct: 806 LKERGLKPNEKIVTLLSGSLNKVLQEPESL 835
Score = 41 (19.5 bits), Expect = 1.8e-68, Sum P(3) = 1.8e-68
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 372 EEGYRKLIDQKKDKRLAFLLSQTDE 396
++G KL+ + K L+ LLSQ ++
Sbjct: 297 QQGGNKLVVETKSSELSPLLSQQNK 321
>SGD|S000005831 [details] [associations]
symbol:ISW2 "ATP-dependent DNA translocase involved in
chromatin remodeling" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA;IPI] [GO:0006338 "chromatin remodeling"
evidence=IEA;IGI;IMP;IPI] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IGI]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0008623
"CHRAC" evidence=ISS;IPI] [GO:0046020 "negative regulation of
transcription from RNA polymerase II promoter by pheromones"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IMP] [GO:0015616 "DNA
translocase activity" evidence=IDA] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000005831 GO:GO:0005524 EMBL:BK006948
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0003697
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006348
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0008623 GO:GO:0006369 GO:GO:0046020 GO:GO:0060195
GO:GO:0015616 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OrthoDB:EOG48SM27 EMBL:Z75212 PIR:S67208
RefSeq:NP_014948.1 ProteinModelPortal:Q08773 SMR:Q08773
DIP:DIP-6603N IntAct:Q08773 MINT:MINT-469536 STRING:Q08773
PaxDb:Q08773 PeptideAtlas:Q08773 PRIDE:Q08773 EnsemblFungi:YOR304W
GeneID:854480 KEGG:sce:YOR304W CYGD:YOR304w OMA:NEQSALS
NextBio:976792 Genevestigator:Q08773 GermOnline:YOR304W
Uniprot:Q08773
Length = 1120
Score = 713 (256.0 bits), Expect = 2.0e-68, Sum P(3) = 2.0e-68
Identities = 145/326 (44%), Positives = 207/326 (63%)
Query: 537 IAHTVHE--IVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIA 594
I T E V+E S + +GKL++YQ++GL W++SL N L+GILADEMGLGKT+QTI+
Sbjct: 162 IVDTYQEDIFVSESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTIS 221
Query: 595 LITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQM-KA 653
+ YL K++ GPFLIIVP STL NW EF +W P+VNV+ G R + +
Sbjct: 222 FLGYLRYVKQIEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILE 281
Query: 654 SKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLT 713
++F+VL+T+YE VI++K L +L W+Y++IDE HR+KN L+ I+ FY + +RLL+T
Sbjct: 282 ARFDVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFY-SKNRLLIT 340
Query: 714 GTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHK 773
GTPLQN L ELWALLNFLLP IF F++WF +E++ ++I++LH
Sbjct: 341 GTPLQNNLHELWALLNFLLPDIFGDSELFDEWFEQ---------NNSEQDQEIVIQQLHS 391
Query: 774 VLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXX 833
VL PFLLRR+K +VE L K+E + M+ +Q Y+ + K I +G+
Sbjct: 392 VLNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGA---VGKRE 448
Query: 834 XXXXLMNTIVQLRKLCNHPFMFQNIE 859
L+N ++QLRK CNHP++F+ E
Sbjct: 449 GKTRLLNIVMQLRKCCNHPYLFEGAE 474
Score = 646 (232.5 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 147/398 (36%), Positives = 234/398 (58%)
Query: 760 NEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI 819
+E++ ++I++LH VL PFLLRR+K +VE L K+E + M+ +Q Y+ + K I
Sbjct: 378 SEQDQEIVIQQLHSVLNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDI 437
Query: 820 LLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYR 879
+G+ L+N ++QLRK CNHP++F+ E G + L
Sbjct: 438 DAVNGA---VGKREGKTRLLNIVMQLRKCCNHPYLFEGAEP-------GPPYTTDEHLIF 487
Query: 880 VSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGD 939
SGK +LD++L +LK G RVL+F QM++L++ILEDY +R F+Y R+DG+T E+R +
Sbjct: 488 NSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIE 547
Query: 940 LLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKN 999
+ ++N P+SE F+F+L+TRAGGLG+NL TADTVI+FDSDWNP DLQA DRAHRIGQK
Sbjct: 548 AIDEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKK 607
Query: 1000 EVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQK-STGSERHQFLQTI-LHQDD 1057
+V V R +T N++EE+++ A KL +D+ VIQ G + S G+ + L I +
Sbjct: 608 QVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGNSKDDLLDMIQFGAKN 667
Query: 1058 EEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKED 1117
+++ + V D ++ +L + E++ Q E K + + + +L + E+
Sbjct: 668 MFEKKASKVTVDADIDDILKKGEQKTQ-----------ELNAKYQSLGLDDLQKFNGIEN 716
Query: 1118 EEIEQW---AFEAKEEEKA---LHMGRGSRQRKQVDYT 1149
+ +W +F+ K +K ++ R R+R+Q Y+
Sbjct: 717 QSAYEWNGKSFQKKSNDKVVEWINPSRRERRREQTTYS 754
Score = 48 (22.0 bits), Expect = 2.0e-68, Sum P(3) = 2.0e-68
Identities = 28/132 (21%), Positives = 60/132 (45%)
Query: 1038 QKSTGSERHQFLQTILHQDDEEDEEENAVPD----DETVNQMLARSEEEFQTYQRIDAER 1093
+ + +E H+ + + + +EE E+ N+ PD DE Q L + F + + D
Sbjct: 841 KNAANTEGHKGHEELKRRIEEEQEKINSAPDFTQEDELRKQELI--SKAFTNWNKRDFMA 898
Query: 1094 RKEQGKKSRLIEVSELPDWL-IKEDEEIEQWA---FEAKEE----EKALH-MGRGSRQRK 1144
K ++ + + K EE+E +A +E +E EK LH + G ++ +
Sbjct: 899 FINACAKYGRDDMENIKKSIDSKTPEEVEVYAKIFWERLKEINGWEKYLHNVELGEKKNE 958
Query: 1145 QVDYTDSLTEKE 1156
++ + ++L ++
Sbjct: 959 KLKFQETLLRQK 970
Score = 44 (20.5 bits), Expect = 2.0e-68, Sum P(3) = 2.0e-68
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 296 QQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMR 336
+QK +++ KR K+ +T + +H K H N ++++
Sbjct: 80 KQKDKSDTYKRFKYLLGVTDLFRHFIGIKAKHDKNIQKLLK 120
>TAIR|locus:2051678 [details] [associations]
symbol:ETL1 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC005936 HOGENOM:HOG000172362
KO:K14439 EMBL:AY059857 EMBL:BT002576 IPI:IPI00520453 PIR:H84432
RefSeq:NP_178318.1 UniGene:At.13358 ProteinModelPortal:Q9ZUL5
SMR:Q9ZUL5 IntAct:Q9ZUL5 PaxDb:Q9ZUL5 PRIDE:Q9ZUL5
EnsemblPlants:AT2G02090.1 GeneID:814740 KEGG:ath:AT2G02090
TAIR:At2g02090 InParanoid:Q9ZUL5 OMA:CAKISAD PhylomeDB:Q9ZUL5
ProtClustDB:CLSN2683669 ArrayExpress:Q9ZUL5 Genevestigator:Q9ZUL5
Uniprot:Q9ZUL5
Length = 763
Score = 424 (154.3 bits), Expect = 4.4e-68, Sum P(2) = 4.4e-68
Identities = 126/363 (34%), Positives = 182/363 (50%)
Query: 557 LKEYQIKGLEWMVSLFNNNLNG-ILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVPL 615
LK YQ+ G+ +++ L+ + G ILADEMGLGKTIQ I +T L GP L++ P
Sbjct: 213 LKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPA 272
Query: 616 STLSNWSLEFERWAPSVNVVAYKGSPHLR--KTLQAQMKASK---FNVLLTTY------- 663
S L NW E +W PS V+ Y G+ + L + KA K FNVLL Y
Sbjct: 273 SVLENWERELRKWCPSFTVLQYHGAARAAYSRELNSLSKAGKPPPFNVLLVCYSLFERHS 332
Query: 664 EYVIKDKGPLAKLHWKYMIIDEGHRMKNHHC-KLTHILNTFYVAPHRLLLTGTPLQNKLP 722
E D+ L + W +++DE H +K+ + + ++++ A RL+LTGTPLQN L
Sbjct: 333 EQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 392
Query: 723 ELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRR 782
ELW+LL F+LP IF T E N K LN E+T LI R + +L PF+LRR
Sbjct: 393 ELWSLLEFMLPDIF----TTE---NVDL-----KKLLNAEDTELITR-MKSILGPFILRR 439
Query: 783 LKKEVESQLPDK---VEYII--KCDMSGLQKVL--YRHM-HTKGILLTDGSEXXXXXXXX 834
LK +V QL K VEY++ + ++ + YR + + L+ S
Sbjct: 440 LKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQARLVKLSSKSLNSLAKALP 499
Query: 835 XXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSG-KFEL-LDRILP 892
+ N Q RK+ NHP + + I +SD I L+ + FE LDR++
Sbjct: 500 KRQISNYFTQFRKIANHPLLIRRI---YSDE---DVIRIARKLHPIGAFGFECSLDRVIE 553
Query: 893 KLK 895
++K
Sbjct: 554 EVK 556
Score = 351 (128.6 bits), Expect = 4.4e-68, Sum P(2) = 4.4e-68
Identities = 74/156 (47%), Positives = 100/156 (64%)
Query: 880 VSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGD 939
+S K L +LP +K +GHRVL+F Q T +++ILE G Y RLDG+T+ DR
Sbjct: 586 LSAKCRTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQT 645
Query: 940 LLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKN 999
++ FN D F +LSTRAGG GLNL ADTVII D D+NP D QA+DR HRIGQ
Sbjct: 646 IVDTFNN-DKSIFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTK 704
Query: 1000 EVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGM 1035
V + RL+T ++V+E I A+ KL +D V+++G+
Sbjct: 705 PVTIFRLVTKSTVDENIYEIAKRKLVLDAAVLESGV 740
Score = 50 (22.7 bits), Expect = 2.9e-28, Sum P(2) = 2.9e-28
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 292 KLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANA 348
K+++ + V ERK+ ++E I +EY +QAR+++L+ +N A A
Sbjct: 451 KIQRVEYVLMERKQEDAYKEAI----------EEYRAASQARLVKLSSKSLNSLAKA 497
Score = 37 (18.1 bits), Expect = 4.7e-35, Sum P(2) = 4.7e-35
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 1030 VIQAGMFDQKSTGSERHQFL 1049
+ Q G+ D K T S++H L
Sbjct: 567 LFQYGVNDTKGTLSDKHVML 586
>DICTYBASE|DDB_G0280705 [details] [associations]
symbol:DDB_G0280705 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
dictyBase:DDB_G0280705 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0003682 EMBL:AAFI02000037
GO:GO:0004003 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
KO:K14437 RefSeq:XP_641133.1 ProteinModelPortal:Q54UZ8
EnsemblProtists:DDB0220644 GeneID:8622691 KEGG:ddi:DDB_G0280705
InParanoid:Q54UZ8 OMA:YPHERID ProtClustDB:CLSZ2846801
Uniprot:Q54UZ8
Length = 2373
Score = 729 (261.7 bits), Expect = 5.3e-68, Sum P(3) = 5.3e-68
Identities = 183/542 (33%), Positives = 285/542 (52%)
Query: 556 KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVPL 615
KL+ YQ++GL W+ ++ N IL DEMGLGKT+Q+++++ L + + GPFL++ PL
Sbjct: 508 KLRPYQLEGLNWLSFCWHEQRNSILGDEMGLGKTVQSVSILETLRKVHGIRGPFLVVAPL 567
Query: 616 STLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDK----- 670
+T+ +W EFE W +N + Y S R + YE+ +KDK
Sbjct: 568 TTIPHWKREFENWT-DMNALVYHDSGAGRP-------------ICRNYEFYLKDKDGGGG 613
Query: 671 ----GPLAKLHWKYMIIDEGHRMK-NHHCKLTHILNTFYVAP--HRLLLTGTPLQNKLPE 723
G K+ K+ ++ + M L+ I + V HRL L +L
Sbjct: 614 GASGGASGKIT-KFNVLITTYEMAITDRTHLSRIPWKYLVIDEAHRLKNKSCKLTIELRS 672
Query: 724 LWALLNFLLPSIFKSVSTFEQW----FNAP--FATTGE-KVELNEEETILIIRRLHKVLR 776
LL +T E W F P F+ + +E + + + L +L+
Sbjct: 673 YSFDHLLLLTGTPLQNNTQELWSLLNFLDPKQFSNLDQFLLEYGDLKESSQVESLQAILK 732
Query: 777 PFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI-LLTDGSEXXXXXXXXX 835
P+LLRR+K+ VE + K E I++ +++ +QK YR ++ K L G +
Sbjct: 733 PYLLRRMKERVEKSIAPKEETIVEVELTTVQKKYYRAIYEKNFSFLRKGGKSNQGPS--- 789
Query: 836 XXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLK 895
L+N +++LRK CNHP++ + +E+ + + + L + SGK L+D++LPKLK
Sbjct: 790 --LLNIMMELRKCCNHPYLTKGVEQSETSSIKDKDQIF-QKLIQASGKLVLIDKLLPKLK 846
Query: 896 STGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
H+VL+F QM +++IL+DY +YRG+ + R+DG+ K DR + +F+ PDS+ F+F+
Sbjct: 847 LGNHKVLIFSQMVSVLDILDDYLTYRGYPHERIDGSIKGNDRQAAIDRFSKPDSDRFVFL 906
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L TRAGG+G+NL ADTVIIFDSDWNP DLQAQ R HRIGQ V+V RL+T N+ E
Sbjct: 907 LCTRAGGIGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQDKMVKVYRLVTKNTYERL 966
Query: 1016 ILAAARYKLNMDEKVI-QAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQ 1074
+ A KL +D V+ + + G+ T +DE +PD ET+N
Sbjct: 967 MFDKASKKLGLDRAVLTKMNSLADSNNGNNSSSSSTT-------KDE----LPDKETINS 1015
Query: 1075 ML 1076
+L
Sbjct: 1016 LL 1017
Score = 55 (24.4 bits), Expect = 5.3e-68, Sum P(3) = 5.3e-68
Identities = 24/110 (21%), Positives = 47/110 (42%)
Query: 1021 RYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSE 1080
++KL+ D+ G D KS + + T ++EED EE V + + R +
Sbjct: 1456 KWKLSTDDD----GGDDSKS----KTESTTTTTIDEEEEDNEEEGVKKWPSAKVLSHRVK 1507
Query: 1081 EEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIE-QWAFEAKE 1129
+T + KE + + IE + + +K+ +E + +W K+
Sbjct: 1508 RLLRTMDFFKNKLEKESKNEKKKIEKEKKQEEKLKKRQEPKVEWTKREKD 1557
Score = 49 (22.3 bits), Expect = 2.3e-67, Sum P(3) = 2.3e-67
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 1252 ELPDYYEVIDRPMDIKKI--LGRIEDGKYSSVDELQKDFK 1289
EL +VI +P K + G +D + SS DE Q DF+
Sbjct: 1090 ELNKKKDVILQPRQRKNVQRFGTFKDHEESSDDEEQSDFE 1129
Score = 42 (19.8 bits), Expect = 5.3e-68, Sum P(3) = 5.3e-68
Identities = 8/40 (20%), Positives = 19/40 (47%)
Query: 272 NVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQE 311
NV++ + E+ E+ E+++ +KK +K +
Sbjct: 226 NVQSESEESEESESESEEDEEEEEEKGANKNKKKNEKENQ 265
Score = 39 (18.8 bits), Expect = 2.5e-66, Sum P(3) = 2.5e-66
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 1054 HQDDEEDEEENAVPDDE 1070
H++ +DEE++ DE
Sbjct: 1116 HEESSDDEEQSDFEPDE 1132
Score = 39 (18.8 bits), Expect = 2.5e-66, Sum P(3) = 2.5e-66
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 1025 NMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEEN--AVPDDETVN 1073
N D + + +++S+ S I + E +EEN V D++ V+
Sbjct: 1263 NNDNDKVNSDSIEKESSSSSSSSPSSNINQDNSIEKKEENDTTVKDEKMVD 1313
Score = 39 (18.8 bits), Expect = 2.5e-66, Sum P(3) = 2.5e-66
Identities = 15/78 (19%), Positives = 32/78 (41%)
Query: 1044 ERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRL 1103
E+ + L Q++EE+ N D++ VN E + + ++
Sbjct: 1243 EKKRLFDLELKQNEEEENNNNN--DNDKVNSDSIEKESSSSSSSSPSSNINQDNS----- 1295
Query: 1104 IEVSELPDWLIKEDEEIE 1121
IE E D +K+++ ++
Sbjct: 1296 IEKKEENDTTVKDEKMVD 1313
Score = 37 (18.1 bits), Expect = 4.1e-66, Sum P(3) = 4.1e-66
Identities = 10/45 (22%), Positives = 23/45 (51%)
Query: 1044 ERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQR 1088
E+ L ILH ++E + E D T +++ + +++ Y++
Sbjct: 2013 EKKASLINILHSEEEFSDNEGFKRIDTTDDRL--KKKQKSSPYKK 2055
>ASPGD|ASPL0000037473 [details] [associations]
symbol:AN2973 species:162425 "Emericella nidulans"
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0070870 "heterochromatin maintenance involved in chromatin
silencing" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0070869 "heterochromatin
assembly involved in chromatin silencing" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031934 "mating-type region heterochromatin" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 EMBL:BN001306 EMBL:AACD01000051
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 OrthoDB:EOG4BCHW4 KO:K14439 HOGENOM:HOG000195581
RefSeq:XP_660577.1 ProteinModelPortal:Q5B907
EnsemblFungi:CADANIAT00010107 GeneID:2874181 KEGG:ani:AN2973.2
OMA:QQVGINW Uniprot:Q5B907
Length = 1107
Score = 437 (158.9 bits), Expect = 7.2e-68, Sum P(2) = 7.2e-68
Identities = 109/308 (35%), Positives = 169/308 (54%)
Query: 556 KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVPL 615
K+K YQI G+ W+ LF N L+ ILAD+MGLGKT Q IA + +L EK + GP L++VP
Sbjct: 563 KMKNYQIVGINWLSLLFENELSCILADDMGLGKTCQVIAFLAHLYEKG-IKGPHLVVVPS 621
Query: 616 STLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASK--FNVLLTTYEYVIKDKGP- 672
ST+ NW EF+++ P+++V+ Y ++R ++ Q++ ++ NV++TTY + K K
Sbjct: 622 STIENWLREFQKFCPTLSVMPYYADQNVRAQIREQIEGNRDDINVVITTYT-IAKGKVDA 680
Query: 673 --LAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLNF 730
L + + + DEGH +K+ L L A RLLLTGTPLQN L EL +LL F
Sbjct: 681 HFLRNMDFCACVYDEGHMLKSSTSVLYEKLIRIR-ARFRLLLTGTPLQNNLQELASLLGF 739
Query: 731 LLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILI----IRRLHKVLRPFLLRRLKKE 786
+LP +F+ Q+ F+ + V+ E + L+ I R +L+PF+LRR K +
Sbjct: 740 ILPKVFQERKDDLQYI---FSNKAKTVD--ESHSALLSAQRIERAKSMLKPFVLRRKKHQ 794
Query: 787 VESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLR 846
V LP K+ + C+M+ Q+ +Y H + L E N +++LR
Sbjct: 795 V-IDLPAKISRVEYCEMNAAQREIYEHEKNEVKKLL---EDRAAGKKTGNKSANILMKLR 850
Query: 847 KLCNHPFM 854
+ HP +
Sbjct: 851 QAAIHPLL 858
Score = 344 (126.2 bits), Expect = 7.2e-68, Sum P(2) = 7.2e-68
Identities = 72/161 (44%), Positives = 108/161 (67%)
Query: 881 SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL 940
SGK + L +L + K G RVL+F Q M+ILE + K++RLDGTT EDR +
Sbjct: 925 SGKVDKLCELLRRFKENGDRVLVFSQFRLAMDILEVVLENQHLKFVRLDGTTSVEDRQSI 984
Query: 941 LKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 1000
+ F+ +++ +F+LST+AGG G+NL A+ VIIFDS +NP +D+QA++RAHR+GQ E
Sbjct: 985 MDTFHE-NTDIPVFLLSTKAGGAGINLACANKVIIFDSSFNPQEDVQAENRAHRVGQTRE 1043
Query: 1001 VRVLRLMTVNSVEERILAAARYKLNMDEKVI-QAGMFDQKS 1040
V V+RL+T +++EE+I A + KL +D+ V + G +KS
Sbjct: 1044 VEVIRLVTKDTIEEQIYALGQTKLALDQAVAGEDGADSKKS 1084
>UNIPROTKB|E1C188 [details] [associations]
symbol:Gga.53842 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 EMBL:AADN02034826 IPI:IPI00592312
Ensembl:ENSGALT00000003680 ArrayExpress:E1C188 Uniprot:E1C188
Length = 3044
Score = 523 (189.2 bits), Expect = 1.5e-67, Sum P(5) = 1.5e-67
Identities = 112/302 (37%), Positives = 173/302 (57%)
Query: 552 LVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLI 611
L+ G L+EYQ GL+W+ L+ NLNGILADE GLGKT+Q IA +L + GP L+
Sbjct: 1086 LLYGPLREYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLV 1145
Query: 612 IVPLSTLSNWSLEFERWAPSVNVVAYKGSPH-LRKTLQAQMKASKFNVLLTTYEYVIKDK 670
+V + W LE +RW P + ++ Y GS LR Q + + FNV +T+Y+ + K
Sbjct: 1146 VVRSCNILKWELELKRWCPGLKILLYFGSQRELRAKRQEWSEPNSFNVCITSYKQLFKGH 1205
Query: 671 GPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLNF 730
K+ WKY+I+DE ++KN K L + + HRLLL TPL N L ELW +++F
Sbjct: 1206 PAFMKMRWKYLIVDEMQQIKNMTEKHWEALFSLR-SQHRLLLIDTPLHNTLMELWTMVHF 1264
Query: 731 LLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQ 790
L+P I + F P E+ N++ ++ RLH++++PF+LRR K++VE Q
Sbjct: 1265 LIPGISRPYLDF------PVKAPNEE---NQDYCHKLVIRLHRMIQPFILRRSKRDVEKQ 1315
Query: 791 LPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCN 850
L K E+++KC +S QK +Y + ++L G++ L + ++QL+++CN
Sbjct: 1316 LTKKYEHVLKCRLSSRQKAMY-----EDVILQPGTQEALKSGHFISVL-HVLMQLQRICN 1369
Query: 851 HP 852
HP
Sbjct: 1370 HP 1371
Score = 271 (100.5 bits), Expect = 1.5e-67, Sum P(5) = 1.5e-67
Identities = 60/146 (41%), Positives = 90/146 (61%)
Query: 875 PDLYRV---SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGT 931
PDL V SGK E L +L KLKS G RVL+ QM +++ILE + ++ ++R+D
Sbjct: 1812 PDLRLVQYDSGKLEALAVLLLKLKSEGRRVLILSQMILMLDILELFLNFHFLTFVRIDEY 1871
Query: 932 TKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDR 991
E R +L+K FN D F +LS+ + G+NL ADTV+ +D+D NP D +AQ+
Sbjct: 1872 ANHEQRQELMKSFNR-DKRIFCAILSSHSRSTGVNLVEADTVVFYDNDLNPVMDAKAQEW 1930
Query: 992 AHRIGQKNEVRVLRLMTVNSVEERIL 1017
RIG+ ++ + RL++ NSVEE++L
Sbjct: 1931 CDRIGRCKDIHIYRLVSGNSVEEKLL 1956
Score = 62 (26.9 bits), Expect = 1.5e-67, Sum P(5) = 1.5e-67
Identities = 23/124 (18%), Positives = 60/124 (48%)
Query: 204 QERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLRAE--VIACA 261
Q + R+A +I R IE ++ + ++++ E + + K LN ++ R V C
Sbjct: 858 QNKLRRIAASIAREIEYFWSNIEQVV--EIKLQIEFQEKRKKALNLKKISRKGNCVSFCK 915
Query: 262 RRDTTLETAVNVKAYKRTKRQGLKEARAT-EKLEKQQKVEAERKKRQ---KHQEYITTVL 317
+ T+ T+++ + + R+ T E++E +++ E++ ++ HQ ++ ++
Sbjct: 916 KFITSRPTSLSADIGRSSGRKRKASTSLTDEEVEDEEETIEEQEAKEGNINHQTELSNLV 975
Query: 318 QHCK 321
+ +
Sbjct: 976 KEAE 979
Score = 46 (21.3 bits), Expect = 1.5e-67, Sum P(5) = 1.5e-67
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 1070 ETVNQMLARSEEEFQTYQRIDAERRK 1095
E +ML EEE TY R DA ++
Sbjct: 2130 EKEQKMLWEDEEELLTYTREDAYNKE 2155
Score = 43 (20.2 bits), Expect = 7.5e-65, Sum P(6) = 7.5e-65
Identities = 10/53 (18%), Positives = 25/53 (47%)
Query: 285 KEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRL 337
K R + +++K+ ER KR++ + ++ EY +N +++ +
Sbjct: 834 KMVRTVARYHEEKKLNEERAKREEQNKLRRIAASIAREI-EYFWSNIEQVVEI 885
Score = 39 (18.8 bits), Expect = 1.5e-67, Sum P(5) = 1.5e-67
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 1110 PDWLIKED 1117
P+WLI ED
Sbjct: 2289 PEWLISED 2296
Score = 39 (18.8 bits), Expect = 1.3e-16, Sum P(5) = 1.3e-16
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 749 PFATTGEKVELNEEETILIIRRLHKV 774
P T G+ E EE+ L+ RL ++
Sbjct: 1650 PAPTHGQSQETYEEKNRLLKERLDRI 1675
Score = 38 (18.4 bits), Expect = 7.5e-65, Sum P(6) = 7.5e-65
Identities = 14/58 (24%), Positives = 25/58 (43%)
Query: 177 GHISSQIKQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLR 234
G ++S +Q LT +P P P ++ R I+ +TS LP+ ++
Sbjct: 79 GPVASGNQQITLTPLPIPNPTSPSFQFSPQQRRFEHGSPSYIQ-----VTSPLPQQVQ 131
Score = 37 (18.1 bits), Expect = 1.3e-13, Sum P(6) = 1.3e-13
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 670 KGPLAKLHWKYMI 682
+ P K HW Y++
Sbjct: 799 EAPRPKSHWDYLL 811
>UNIPROTKB|F1SDX0 [details] [associations]
symbol:ERCC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0047485 "protein N-terminus binding" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0032786 "positive regulation of DNA-dependent transcription,
elongation" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0010224 "response to UV-B" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0009636 "response
to toxic substance" evidence=IEA] [GO:0008630 "intrinsic apoptotic
signaling pathway in response to DNA damage" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0008023 "transcription elongation factor complex" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0007257
"activation of JUN kinase activity" evidence=IEA] [GO:0007256
"activation of JNKK activity" evidence=IEA] [GO:0006290 "pyrimidine
dimer repair" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000303 "response to superoxide" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008630
GO:GO:0005730 GO:GO:0006284 GO:GO:0003677 GO:GO:0009636
GO:GO:0003682 GO:GO:0045494 GO:GO:0010332 GO:GO:0004386
GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 GO:GO:0032786 GO:GO:0006290 GO:GO:0007256
GeneTree:ENSGT00590000083118 KO:K10841 OMA:NGEMQIF GO:GO:0000303
EMBL:CT990602 EMBL:CT990615 RefSeq:XP_003483566.1
Ensembl:ENSSSCT00000011375 GeneID:100738583 KEGG:ssc:100738583
Uniprot:F1SDX0
Length = 1481
Score = 710 (255.0 bits), Expect = 3.1e-67, Sum P(3) = 3.1e-67
Identities = 172/531 (32%), Positives = 282/531 (53%)
Query: 556 KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKK-KVNG------- 607
KL +YQ G+ W+ L GIL DEMGLGKTIQ IA + L K + G
Sbjct: 495 KLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEG 554
Query: 608 --PFLIIVPLSTLSNWSLEFERWAPSVNV-VAYK-GS-PHLRKTLQAQMKASKFNVLLTT 662
P +I+ P + + W EF W P V + ++ GS H ++ L + A +L+T+
Sbjct: 555 LGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSFTHKKEKLVRDI-AHCHGILITS 613
Query: 663 YEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLP 722
Y Y+ + +++ W Y+I+DEGH+++N + +T F PHR++L+G+P+QN L
Sbjct: 614 YSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRT-PHRIILSGSPMQNNLR 672
Query: 723 ELWALLNFLLPSIFKSVSTFEQWFNAPFATTG----EKVELNEEETILIIRRLHKVLRPF 778
ELW+L +F+ P ++ F + F+ P G V++ + L + P+
Sbjct: 673 ELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV--LRDTINPY 730
Query: 779 LLRRLKKEVESQL--PDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXX 836
LLRR+K +V+ L PDK E ++ C ++ Q +Y++ D E
Sbjct: 731 LLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNF-------IDSKEVYRILNGEMQ 783
Query: 837 XLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLY-RVSGKFELLDRILPKLK 895
+ + +V LRK+CNHP +F + F + G + Y + SGK +++ +L
Sbjct: 784 -IFSGLVALRKICNHPDLFSGGPKNFKG-IPGEELEEDQFGYWKRSGKMIVVESLLKIWH 841
Query: 896 STGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFV 955
G RVLLF Q Q+++ILE + + + Y+++DGTT R L+ ++N D+ F+F+
Sbjct: 842 KQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTTIASRQPLITRYNE-DASIFVFL 900
Query: 956 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEER 1015
L+TR GGLG+NL A+ VII+D DWNP D QA++RA RIGQK +V V RL+T ++EE+
Sbjct: 901 LTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 960
Query: 1016 ILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAV 1066
I +K + +V++ + ++ ++ L T+ D + E +A+
Sbjct: 961 IYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYE-LFTLTSPDTSQSTETSAI 1010
Score = 54 (24.1 bits), Expect = 3.1e-67, Sum P(3) = 3.1e-67
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 265 TTLETAVNVKAYKRTKRQGLKEARATEK-LEKQQKVEAERKKR 306
T T + K K+ ++ L EA EK L Q K+ ERKK+
Sbjct: 247 TPFGTQIPQKQEKKPRKLMLNEASGFEKYLADQAKLSFERKKQ 289
Score = 47 (21.6 bits), Expect = 1.7e-66, Sum P(3) = 1.7e-66
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 247 LNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKR 306
L+F+R+ +A C +R A T+ + + + T L+K +++E +K
Sbjct: 282 LSFERKKQA----CNKRAARKALASVTSEPSSTRSENKPDKKGTVLLKKDKRLEKRIRKL 337
Query: 307 QK 308
QK
Sbjct: 338 QK 339
Score = 45 (20.9 bits), Expect = 3.1e-67, Sum P(3) = 3.1e-67
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 57 LQRAIDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQ 98
+ R +DS+K Q ++ Q+L ++ A R ++ A+VQ
Sbjct: 166 INRKLDSVKRQKYNKE---QQLKKITAKRKRLQAILGGAEVQ 204
>SGD|S000000449 [details] [associations]
symbol:ISW1 "ATPase subunit of imitation-switch (ISWI) class
chromatin remodelers" species:4932 "Saccharomyces cerevisiae"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=IEA;IDA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0000182 "rDNA
binding" evidence=IDA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] [GO:0070870 "heterochromatin
maintenance involved in chromatin silencing" evidence=IGI;IMP]
[GO:0016587 "Isw1 complex" evidence=IPI] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;IGI;IMP;IPI] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IMP] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000000449 GO:GO:0005524 GO:GO:0006200
GO:GO:0045944 EMBL:BK006936 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
GO:GO:0034401 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006363 GO:GO:0006354 GO:GO:0006369
GeneTree:ENSGT00670000098110 GO:GO:0030874 GO:GO:0000182
GO:GO:0001178 GO:GO:0070870 GO:GO:0016587 PDB:2Y9Y PDB:2Y9Z
PDBsum:2Y9Y PDBsum:2Y9Z HOGENOM:HOG000192862 SUPFAM:SSF101224
EMBL:Z36114 PIR:S46122 RefSeq:NP_009804.1 ProteinModelPortal:P38144
SMR:P38144 DIP:DIP-6601N IntAct:P38144 MINT:MINT-614918
STRING:P38144 PaxDb:P38144 PeptideAtlas:P38144 EnsemblFungi:YBR245C
GeneID:852547 KEGG:sce:YBR245C CYGD:YBR245c OMA:LEMITHG
OrthoDB:EOG48SM27 EvolutionaryTrace:P38144 NextBio:971628
Genevestigator:P38144 GermOnline:YBR245C Uniprot:P38144
Length = 1129
Score = 705 (253.2 bits), Expect = 1.3e-66, Sum P(3) = 1.3e-66
Identities = 142/318 (44%), Positives = 199/318 (62%)
Query: 543 EIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEK 602
E ++ VNG+L+ YQI+G+ W+VSL N + GILADEMGLGKT+QTI+ + YL
Sbjct: 182 EFQFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYI 241
Query: 603 KKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTL-QAQMKASKFNVLLT 661
+K+ GPFL+I P STL+NW E RW P VN +G R L Q ++ F+V++
Sbjct: 242 EKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQKKLLGCDFDVVIA 301
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
+YE +I++K PL K++W+Y+IIDE HR+KN L+ +L F + +RLL+TGTPLQN L
Sbjct: 302 SYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREF-TSRNRLLITGTPLQNNL 360
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 781
ELWALLNFLLP IF F+ WF++ E EE+ I+++LH VL+PFLLR
Sbjct: 361 HELWALLNFLLPDIFSDAQDFDDWFSS---------ESTEEDQDKIVKQLHTVLQPFLLR 411
Query: 782 RLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNT 841
R+K +VE+ L K E + MS +QK Y+ + K + +GS L+N
Sbjct: 412 RIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTR---LLNI 468
Query: 842 IVQLRKLCNHPFMFQNIE 859
++QLRK CNHP++F E
Sbjct: 469 MMQLRKCCNHPYLFDGAE 486
Score = 629 (226.5 bits), Expect = 6.8e-57, Sum P(2) = 6.8e-57
Identities = 129/275 (46%), Positives = 181/275 (65%)
Query: 758 ELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK 817
E EE+ I+++LH VL+PFLLRR+K +VE+ L K E + MS +QK Y+ + K
Sbjct: 388 ESTEEDQDKIVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEK 447
Query: 818 GILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDL 877
+ +GS L+N ++QLRK CNHP++F E G + L
Sbjct: 448 DLDAVNGSNGSKESKTR---LLNIMMQLRKCCNHPYLFDGAEP-------GPPYTTDEHL 497
Query: 878 YRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDR 937
+ K ++LD++L KLK G RVL+F QM++L++ILEDY +R ++Y R+DG+T EDR
Sbjct: 498 VYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDR 557
Query: 938 GDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQ 997
+ +NAPDS+ F+F+L+TRAGGLG+NL +AD V+++DSDWNP DLQA DRAHRIGQ
Sbjct: 558 IQAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQ 617
Query: 998 KNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQ 1032
K +V+V RL+T NSVEE+IL A KL +D+ VIQ
Sbjct: 618 KKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQ 652
Score = 48 (22.0 bits), Expect = 1.3e-66, Sum P(3) = 1.3e-66
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 912 NILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSE 950
N +E+ R + +RLD ++R L KK N DS+
Sbjct: 630 NSVEEKILERATQKLRLDQLVIQQNRTSLKKKENKADSK 668
Score = 37 (18.1 bits), Expect = 1.3e-66, Sum P(3) = 1.3e-66
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 285 KEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKD 322
K+ + + L+ ++ +A K + KHQ+ +H +D
Sbjct: 129 KDPKFRQVLDVLEENKANGKGKGKHQDVRRRKTEHEED 166
>TAIR|locus:2182978 [details] [associations]
symbol:CHR17 "chromatin remodeling factor17" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005829 "cytosol" evidence=RCA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0006259 "DNA metabolic
process" evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IGI] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CP002688 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 GO:GO:0010228 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 KO:K11654 OMA:MQRKWYK SUPFAM:SSF101224
IPI:IPI00547773 RefSeq:NP_850847.1 UniGene:At.19176
ProteinModelPortal:F4JY25 SMR:F4JY25 IntAct:F4JY25 PRIDE:F4JY25
EnsemblPlants:AT5G18620.2 GeneID:831980 KEGG:ath:AT5G18620
PhylomeDB:F4JY25 Uniprot:F4JY25
Length = 1072
Score = 690 (248.0 bits), Expect = 3.1e-66, Sum P(3) = 3.1e-66
Identities = 146/329 (44%), Positives = 211/329 (64%)
Query: 767 IIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
++++LHKVLRPFLLRRLK +VE LP K E I+K MS +QK Y+ + K + + +G
Sbjct: 394 VVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNGG- 452
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFEL 886
L+N +QLRK CNHP++FQ E G +G L +GK L
Sbjct: 453 ------GERKRLLNIAMQLRKCCNHPYLFQGAEP-------GPPYTTGDHLVTNAGKMVL 499
Query: 887 LDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNA 946
LD++LPKLK RVL+F QMT+L++ILEDY YRG++Y R+DG T ++R ++ +N
Sbjct: 500 LDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNK 559
Query: 947 PDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 1006
P SE F+F+LSTRAGGLG+NL TAD VI++DSDWNP DLQAQDRAHRIGQK EV+V R
Sbjct: 560 PGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRF 619
Query: 1007 MTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAV 1066
T N++E +++ A KL +D VIQ G ++ T + + + LQ + + + +++
Sbjct: 620 CTENAIEAKVIERAYKKLALDALVIQQGRLAEQKTVN-KDELLQMVRYGAEMVFSSKDST 678
Query: 1067 PDDETVNQMLARSEEEFQTYQRIDAERRK 1095
DE +++++A+ EE T + +DA+ +K
Sbjct: 679 ITDEDIDRIIAKGEEA--TAE-LDAKMKK 704
Score = 665 (239.2 bits), Expect = 4.2e-63, Sum P(3) = 4.2e-63
Identities = 130/282 (46%), Positives = 191/282 (67%)
Query: 544 IVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKK 603
++T+ A I GKL++YQ+ GL W++ L+ N +NGILADEMGLGKT+QTI+L+ YL E +
Sbjct: 183 LLTQPACI--QGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYR 240
Query: 604 KVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMK-ASKFNVLLTT 662
+NGP +++ P STL NW E R+ P + V + G+P R+ ++ ++ A KF++ +T+
Sbjct: 241 GINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGKFDICVTS 300
Query: 663 YEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLP 722
+E IK+K L + W+Y+IIDE HR+KN + L+ + F +RLL+TGTPLQN L
Sbjct: 301 FEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTN-YRLLITGTPLQNNLH 359
Query: 723 ELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRR 782
ELWALLNFLLP +F S TF++WF +GE N+++ + +++LHKVLRPFLLRR
Sbjct: 360 ELWALLNFLLPEVFSSAETFDEWFQI----SGE----NDQQEV--VQQLHKVLRPFLLRR 409
Query: 783 LKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDG 824
LK +VE LP K E I+K MS +QK Y+ + K + + +G
Sbjct: 410 LKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNG 451
Score = 54 (24.1 bits), Expect = 3.1e-66, Sum P(3) = 3.1e-66
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 1073 NQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEI 1120
++M ++EEE + Y ++ R KE R+I+ E + I +EI
Sbjct: 875 SEMEGKTEEEVERYAQVFQVRYKELNDYDRIIKNIERGEARISRKDEI 922
Score = 49 (22.3 bits), Expect = 1.4e-62, Sum P(3) = 1.4e-62
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 1044 ERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRL 1103
++ Q TI + DE +E + + +E + L EE F T+ R D +K
Sbjct: 811 QKTQMKDTI--EVDEPEEVGDPLTAEEVEEKELLL-EEGFSTWSRRDFNAFIRACEKYGR 867
Query: 1104 IEVSELPDWLI-KEDEEIEQWA--FEAKEEE 1131
++ + + K +EE+E++A F+ + +E
Sbjct: 868 NDIKSIASEMEGKTEEEVERYAQVFQVRYKE 898
Score = 41 (19.5 bits), Expect = 3.1e-66, Sum P(3) = 3.1e-66
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 285 KEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRL 337
+E K EK + E ++ K+QK Q+ + + Q+ + + + RI L
Sbjct: 76 EEKAEISKREKARLKEMQKMKKQKIQQILDS--QNASIDADMNNKGKGRIKYL 126
Score = 37 (18.1 bits), Expect = 1.9e-64, Sum P(3) = 1.9e-64
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 1100 KSRLI-EVSELPDWLI----KEDEEIEQWAFEAKEEEK 1132
KSR E++ D LI KE++E ++ +A++E+K
Sbjct: 992 KSRTTQELARRCDTLIRLIEKENQEFDERERQARKEKK 1029
>POMBASE|SPAC20G8.08c [details] [associations]
symbol:fft1 "fun thirty related protein Fft1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC20G8.08c
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 PIR:T38130 RefSeq:NP_593325.1
ProteinModelPortal:P87114 EnsemblFungi:SPAC20G8.08c.1
GeneID:2541983 KEGG:spo:SPAC20G8.08c OrthoDB:EOG4BCHW4
NextBio:20803065 Uniprot:P87114
Length = 944
Score = 452 (164.2 bits), Expect = 3.5e-66, Sum P(2) = 3.5e-66
Identities = 119/337 (35%), Positives = 178/337 (52%)
Query: 529 MEEATYYSIAHTVHEIVTEQASILVNG-KLKEYQIKGLEWMVSLFNNNLNGILADEMGLG 587
ME+ S +E ++Q S + +G LK YQI GL W+ ++ L+GILADEMGLG
Sbjct: 385 MEQFLNTSTGSISYEYNSQQPSSIASGITLKSYQIVGLNWLCLMYKAKLSGILADEMGLG 444
Query: 588 KTIQTIALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTL 647
KT Q I+ + L EK + L++VP STL NW EFE++ PS+ V +Y G+ R
Sbjct: 445 KTCQVISFLASLKEKG-IQNRHLVVVPSSTLGNWLREFEKFCPSLRVESYSGTQSERINK 503
Query: 648 QAQMKASKFNVLLTTYEYVI---KDKGPLAKLHWKYMIIDEGHRMKNHHC-KLTHILNTF 703
+ + + F+VL+TTY+ D+ L K + I DEGH +KN + H++N
Sbjct: 504 RYYLMDTDFDVLVTTYQLASGSRDDRSFLRKQRFDISIFDEGHYLKNRMSERYKHLMNI- 562
Query: 704 YVAPHRLLLTGTPLQNKLPELWALLNFLLPSIF-KSVSTFEQWFNAPFATTG--EKVELN 760
A RLL+TGTPLQN L EL +LL F+LP +F ++ + + + G E+ L+
Sbjct: 563 -PANFRLLITGTPLQNNLKELISLLAFMLPKVFDNNMQGLDIIYKIKTTSDGDIERAYLS 621
Query: 761 EEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGIL 820
+E I R ++ PF+LRR K+ V S LP K++++ C M Q LY + L
Sbjct: 622 QER----ISRAKTIMNPFILRRRKENVLSDLPPKIQHVEYCHMEETQLSLYLSVLELKNL 677
Query: 821 LTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQN 857
+ E N ++QLRK H +F++
Sbjct: 678 VNANRE-------------NILMQLRKAALHQLLFRS 701
Score = 309 (113.8 bits), Expect = 3.5e-66, Sum P(2) = 3.5e-66
Identities = 67/170 (39%), Positives = 102/170 (60%)
Query: 881 SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL 940
S K + L +L K + R+L+F Q TQ+++ILE + +++RLDG+T E R L
Sbjct: 764 SAKVKKLCSLLKKSRPN-ERILIFSQFTQVLDILEYVLNTLDLEFLRLDGSTPVETRQQL 822
Query: 941 LKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 1000
+ F+ ++ Y +F+LST++GG G+NL A+ VI+FD +NP D+QA+DRAHR+GQ
Sbjct: 823 IDDFHTNEN-YKVFLLSTKSGGFGINLTCANIVILFDCSFNPFDDMQAEDRAHRVGQTRP 881
Query: 1001 VRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQ 1050
V V RL+T N++EE I A KL ++ + QK E + LQ
Sbjct: 882 VHVYRLITKNTIEENIRRLANTKLTLESSLTTDSEKIQKEISGELMKSLQ 931
Score = 39 (18.8 bits), Expect = 3.9e-22, Sum P(2) = 3.9e-22
Identities = 14/58 (24%), Positives = 31/58 (53%)
Query: 755 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYR 812
E+ +L+ ++L ++ L R +L +L+K QL + +Y ++ +S + K + R
Sbjct: 661 EETQLSLYLSVLELKNLVNANRENILMQLRKAALHQLLFRSQYNLET-LSLMSKRILR 717
>UNIPROTKB|E1C0M8 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0000793 "condensed
chromosome" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005677 "chromatin
silencing complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0009790 "embryo development" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043596 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 EMBL:AADN02016239 EMBL:AADN02016240
IPI:IPI00577188 Ensembl:ENSGALT00000016121 ArrayExpress:E1C0M8
Uniprot:E1C0M8
Length = 1038
Score = 675 (242.7 bits), Expect = 3.8e-66, Sum P(2) = 3.8e-66
Identities = 137/314 (43%), Positives = 194/314 (61%)
Query: 547 EQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVN 606
E S + GKL++YQ++GL W++SL+ N +NGILADEMGLGKT+QTI+L+ Y+ + +
Sbjct: 155 ESPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 214
Query: 607 GPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEY 665
GP +++VP STL NW EF+RW P++ V G R ++ + +++V +T+YE
Sbjct: 215 GPHMVLVPKSTLHNWMNEFKRWVPTLRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEM 274
Query: 666 VIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELW 725
+IK+K K +W+Y++IDE HR+KN KL+ I+ F +RLLLTGTPLQN L ELW
Sbjct: 275 LIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTT-NRLLLTGTPLQNNLHELW 333
Query: 726 ALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 785
ALLNFLLP +F S F+ WF+ +K ++ RLH VLRPFLLRR+K
Sbjct: 334 ALLNFLLPDVFNSSEDFDSWFDTNNCLGDQK----------LVERLHMVLRPFLLRRIKA 383
Query: 786 EVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQL 845
+VE LP K E I +S +Q R +T+ IL+ D L+N ++QL
Sbjct: 384 DVEKSLPPKKEVKIYVGLSKMQ----REWYTR-ILMKDIDILNSAGKLDKMRLLNILMQL 438
Query: 846 RKLCNHPFMFQNIE 859
RK CNHP++F E
Sbjct: 439 RKCCNHPYLFDGAE 452
Score = 635 (228.6 bits), Expect = 2.3e-58, Sum P(2) = 2.3e-58
Identities = 150/373 (40%), Positives = 208/373 (55%)
Query: 767 IIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q R +T+ IL+ D
Sbjct: 365 LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQ----REWYTR-ILMKDIDI 419
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFEL 886
L+N ++QLRK CNHP++F E G + L SGK +
Sbjct: 420 LNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEP-------GPPYTTDMHLVTNSGKMVV 472
Query: 887 LDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNA 946
LD++LPKLK G RVL+F QMT++++ILEDY +R ++Y RLDG T ++R + +N
Sbjct: 473 LDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNE 532
Query: 947 PDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 1006
P S F+F+LSTRAGGLG+NL TAD VI++DSDWNP DLQA DRAHRIGQ VRV R
Sbjct: 533 PGSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRF 592
Query: 1007 MTVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEENA 1065
+T N+VEERI+ A KL +D VIQ G + DQ + + LQ I H + +
Sbjct: 593 ITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKES 652
Query: 1066 VPDDETVNQMLAR-SEEEFQTYQRIDAERRKEQGKKSRLIEVS----ELPDWLIKEDEEI 1120
DE ++ +L R +++ + +++ + E S E D+ K+
Sbjct: 653 EITDEDIDHILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKMAF 712
Query: 1121 EQWAFEAKEEEKA 1133
+W K E KA
Sbjct: 713 TEWIEPPKRERKA 725
Score = 70 (29.7 bits), Expect = 3.8e-66, Sum P(2) = 3.8e-66
Identities = 47/196 (23%), Positives = 92/196 (46%)
Query: 968 QTADTVIIFDSD-WNPHQDLQAQDRAHRIGQKNEVRVLRLMTVN-SVEERILAAARYKLN 1025
+T + VI + + W +LQ ++ ++ E R+ R +++ +++ +I RYK
Sbjct: 860 KTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKI---GRYKAP 916
Query: 1026 MDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQT 1085
+ I G K+ E +FL +LH+ + +EN DE + Q + R+ +F+
Sbjct: 917 FHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFD--KENVY--DE-LRQCI-RNSPQFRF 970
Query: 1086 YQRIDAERRKE-QGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRK 1144
+ + E Q + + LI + E +E+ E+E+ + K E+K S Q++
Sbjct: 971 DWFLKSRTAMELQRRCNTLITLIE------RENMELEE---KEKAEKKKRGPKPSSAQKR 1021
Query: 1145 QVDYT-DSLTEKEWLK 1159
++D T D K+ LK
Sbjct: 1022 KMDGTPDGRGRKKKLK 1037
Score = 41 (19.5 bits), Expect = 4.3e-63, Sum P(2) = 4.3e-63
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E + DI+KI+ +IE G+
Sbjct: 872 FWERCNELQDIEKIMAQIERGE 893
>UNIPROTKB|E1C186 [details] [associations]
symbol:Gga.53842 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0016607 GO:GO:0003682
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:MQKQKLQ EMBL:AADN02034826
IPI:IPI00587546 Ensembl:ENSGALT00000003682 ArrayExpress:E1C186
Uniprot:E1C186
Length = 3118
Score = 523 (189.2 bits), Expect = 4.9e-66, Sum P(5) = 4.9e-66
Identities = 112/302 (37%), Positives = 173/302 (57%)
Query: 552 LVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLI 611
L+ G L+EYQ GL+W+ L+ NLNGILADE GLGKT+Q IA +L + GP L+
Sbjct: 1086 LLYGPLREYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLV 1145
Query: 612 IVPLSTLSNWSLEFERWAPSVNVVAYKGSPH-LRKTLQAQMKASKFNVLLTTYEYVIKDK 670
+V + W LE +RW P + ++ Y GS LR Q + + FNV +T+Y+ + K
Sbjct: 1146 VVRSCNILKWELELKRWCPGLKILLYFGSQRELRAKRQEWSEPNSFNVCITSYKQLFKGH 1205
Query: 671 GPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLNF 730
K+ WKY+I+DE ++KN K L + + HRLLL TPL N L ELW +++F
Sbjct: 1206 PAFMKMRWKYLIVDEMQQIKNMTEKHWEALFSLR-SQHRLLLIDTPLHNTLMELWTMVHF 1264
Query: 731 LLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQ 790
L+P I + F P E+ N++ ++ RLH++++PF+LRR K++VE Q
Sbjct: 1265 LIPGISRPYLDF------PVKAPNEE---NQDYCHKLVIRLHRMIQPFILRRSKRDVEKQ 1315
Query: 791 LPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCN 850
L K E+++KC +S QK +Y + ++L G++ L + ++QL+++CN
Sbjct: 1316 LTKKYEHVLKCRLSSRQKAMY-----EDVILQPGTQEALKSGHFISVL-HVLMQLQRICN 1369
Query: 851 HP 852
HP
Sbjct: 1370 HP 1371
Score = 271 (100.5 bits), Expect = 4.9e-66, Sum P(5) = 4.9e-66
Identities = 60/146 (41%), Positives = 90/146 (61%)
Query: 875 PDLYRV---SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGT 931
PDL V SGK E L +L KLKS G RVL+ QM +++ILE + ++ ++R+D
Sbjct: 1891 PDLRLVQYDSGKLEALAVLLLKLKSEGRRVLILSQMILMLDILELFLNFHFLTFVRIDEY 1950
Query: 932 TKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDR 991
E R +L+K FN D F +LS+ + G+NL ADTV+ +D+D NP D +AQ+
Sbjct: 1951 ANHEQRQELMKSFNR-DKRIFCAILSSHSRSTGVNLVEADTVVFYDNDLNPVMDAKAQEW 2009
Query: 992 AHRIGQKNEVRVLRLMTVNSVEERIL 1017
RIG+ ++ + RL++ NSVEE++L
Sbjct: 2010 CDRIGRCKDIHIYRLVSGNSVEEKLL 2035
Score = 48 (22.0 bits), Expect = 4.9e-66, Sum P(5) = 4.9e-66
Identities = 19/121 (15%), Positives = 54/121 (44%)
Query: 204 QERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLRAEVIACARR 263
Q + R+A +I R IE ++ + ++++ E + + K LN ++ R A
Sbjct: 861 QNKLRRIAASIAREIEYFWSNIEQVV--EIKLQIEFQEKRKKALNLKKISRKGKDAKPSE 918
Query: 264 DTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQ---KHQEYITTVLQHC 320
D + + +++ + E++E +++ E++ ++ HQ ++ +++
Sbjct: 919 DLFPIKEGEMGSSSSGRKRKASTSLTDEEVEDEEETIEEQEAKEGNINHQTELSNLVKEA 978
Query: 321 K 321
+
Sbjct: 979 E 979
Score = 46 (21.3 bits), Expect = 4.9e-66, Sum P(5) = 4.9e-66
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 1070 ETVNQMLARSEEEFQTYQRIDAERRK 1095
E +ML EEE TY R DA ++
Sbjct: 2209 EKEQKMLWEDEEELLTYTREDAYNKE 2234
Score = 43 (20.2 bits), Expect = 9.0e-65, Sum P(6) = 9.0e-65
Identities = 10/53 (18%), Positives = 25/53 (47%)
Query: 285 KEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMRL 337
K R + +++K+ ER KR++ + ++ EY +N +++ +
Sbjct: 837 KMVRTVARYHEEKKLNEERAKREEQNKLRRIAASIAREI-EYFWSNIEQVVEI 888
Score = 39 (18.8 bits), Expect = 4.9e-66, Sum P(5) = 4.9e-66
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 1110 PDWLIKED 1117
P+WLI ED
Sbjct: 2368 PEWLISED 2375
Score = 39 (18.8 bits), Expect = 4.1e-14, Sum P(6) = 4.1e-14
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 749 PFATTGEKVELNEEETILIIRRLHKV 774
P T G+ E EE+ L+ RL ++
Sbjct: 1729 PAPTHGQSQETYEEKNRLLKERLDRI 1754
Score = 38 (18.4 bits), Expect = 9.0e-65, Sum P(6) = 9.0e-65
Identities = 14/58 (24%), Positives = 25/58 (43%)
Query: 177 GHISSQIKQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLR 234
G ++S +Q LT +P P P ++ R I+ +TS LP+ ++
Sbjct: 79 GPVASGNQQITLTPLPIPNPTSPSFQFSPQQRRFEHGSPSYIQ-----VTSPLPQQVQ 131
Score = 37 (18.1 bits), Expect = 1.6e-13, Sum P(6) = 1.6e-13
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 670 KGPLAKLHWKYMI 682
+ P K HW Y++
Sbjct: 802 EAPRPKSHWDYLL 814
>ZFIN|ZDB-GENE-081104-186 [details] [associations]
symbol:si:ch211-227i14.2 "si:ch211-227i14.2"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
Pfam:PF00176 PROSITE:PS51194 SMART:SM00717 ZFIN:ZDB-GENE-081104-186
GO:GO:0005524 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 EMBL:AL929056
EMBL:CABZ01053382 EMBL:CABZ01053383 IPI:IPI00890401
Ensembl:ENSDART00000111655 Bgee:F1Q5V1 Uniprot:F1Q5V1
Length = 3108
Score = 538 (194.4 bits), Expect = 5.7e-66, Sum P(5) = 5.7e-66
Identities = 112/307 (36%), Positives = 181/307 (58%)
Query: 552 LVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLI 611
L++G L+EYQ G+EW+ SL NLNGILADE GLGKT+QT+A +L + + GP L+
Sbjct: 1056 LLHGSLREYQQVGVEWLASLHRKNLNGILADETGLGKTVQTVAYFAHLACNQGIWGPHLV 1115
Query: 612 IVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQM-KASKFNVLLTTYEYVIKDK 670
+V L NW +EF+RW P + ++ Y GS R+ +++ + + F+V +T+Y+ ++KD+
Sbjct: 1116 VVRTCKLLNWEMEFKRWCPGLKILLYLGSRRQRRYKRSRWCEPNNFHVCVTSYKLLLKDQ 1175
Query: 671 GPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYV-APHRLLLTGTPLQNKLPELWALLN 729
+ WK++++DE +KN K H F + + R+LL TPLQN L ELW +++
Sbjct: 1176 SHFLRRRWKHLVLDEVQLIKNMTEK--HWETIFNIKSQQRILLINTPLQNTLKELWTMIH 1233
Query: 730 FLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVES 789
FLLP I + N P ++ N++ ++ RLH++++PF+LRR K++VE
Sbjct: 1234 FLLPGIT------HPYLNFPIKPGTDQ---NQDYCHKLVIRLHRMIQPFILRRSKRDVEK 1284
Query: 790 QLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLC 849
Q+P K E+I+KC +S QK +Y +L S ++ ++QL+K+C
Sbjct: 1285 QMPKKYEHILKCRLSKRQKSMYED------ILIQPSAQEALKTGHFVRVLEVLMQLQKIC 1338
Query: 850 NHPFMFQ 856
NHP + Q
Sbjct: 1339 NHPDLIQ 1345
Score = 267 (99.0 bits), Expect = 5.7e-66, Sum P(5) = 5.7e-66
Identities = 75/278 (26%), Positives = 149/278 (53%)
Query: 871 IVSGPDLYRV----SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYM 926
+ S PD + + +GK E L +L KL + RVL+F QM +++ILE + +R Y+
Sbjct: 1854 VASFPDAHMLEMDSAGKLEALSILLQKLSAENRRVLIFTQMASMLDILESFLDHRHLTYV 1913
Query: 927 RLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRA-GGLGLNLQTADTVIIFDSDWNPHQD 985
RLD + E+R + +KK+N + + F +L+ R +G ++ ADT++ +D+D NP D
Sbjct: 1914 RLDESLSLEERQEQVKKYNR-NRQIFCTILTNRCCSAMG-HVFDADTIVFYDTDLNPSMD 1971
Query: 986 LQAQDRAHRIGQKNEVRVLRLMTVNSVEERIL----------AAAR---YKLN-MDEKVI 1031
++ Q+ +IG+ ++ + RL + NS+EE++L AA+ Y L + ++ I
Sbjct: 1972 MRTQEWCDKIGRSKDIHIYRLESGNSIEEKLLKNGTKDLIREVAAQGMDYTLAFLTQRTI 2031
Query: 1032 QAGMFD-QKSTGSERHQFLQTILHQDDEEDEE---ENAVPDDETVNQMLARSE-EEFQTY 1086
Q +F+ + +G + +F+ +LHQ+ E A P + +N + ++ EE +
Sbjct: 2032 Q-DLFEVEAGSGEKVEEFV--VLHQEPSPSESIPPHVARPYIQALNTIRQETQYEEEEGQ 2088
Query: 1087 QRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWA 1124
+D + + ++ K +E+ ++ + +E ++E+ A
Sbjct: 2089 VEVDEDVKSDKEKAGGPVEM-DIEEGAREETSQLEELA 2125
Score = 42 (19.8 bits), Expect = 8.6e-43, Sum P(5) = 8.6e-43
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 1070 ETVNQMLARSEEEFQTYQRIDA 1091
E QM+ EE+ +Y R DA
Sbjct: 2176 EKEEQMIQEDEEDLLSYTREDA 2197
Score = 41 (19.5 bits), Expect = 5.7e-66, Sum P(5) = 5.7e-66
Identities = 18/79 (22%), Positives = 30/79 (37%)
Query: 49 NPQENLTALQRAIDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQQLRFQIMAYR 108
N Q LT+L + S G + P+ + ++ ++ Q Q
Sbjct: 84 NQQITLTSLP--LQSPASPGFQHQPQQWRFEPGSSSYIQVTSPLPQTMQPQSPTQHSPVP 141
Query: 109 LLARNQPLTPQLAMGVQGK 127
L A +P P A+GV G+
Sbjct: 142 LQAVPRPNAPGSALGVCGQ 160
Score = 40 (19.1 bits), Expect = 5.7e-66, Sum P(5) = 5.7e-66
Identities = 10/50 (20%), Positives = 23/50 (46%)
Query: 274 KAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDF 323
+ +K + L A +EK++ E E+K+ + +I + + D+
Sbjct: 803 RRWKMAAAKKLVRTCARYHVEKKKMGEREKKEEEMRLRHIASTIARGVDY 852
Score = 39 (18.8 bits), Expect = 5.7e-66, Sum P(5) = 5.7e-66
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 1110 PDWLIKED 1117
P+WLI ED
Sbjct: 2332 PEWLISED 2339
Score = 37 (18.1 bits), Expect = 5.4e-43, Sum P(4) = 5.4e-43
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 1280 SVDELQKDFKTLCRNAQIY 1298
S++E Q+ K RN QI+
Sbjct: 1920 SLEERQEQVKKYNRNRQIF 1938
>ZFIN|ZDB-GENE-070228-1 [details] [associations]
symbol:ercc6 "excision repair cross-complementing
rodent repair deficiency, complementation group 6" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-070228-1 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00590000083118 CTD:2074 KO:K10841
EMBL:CR762493 IPI:IPI00933448 RefSeq:XP_688972.2
Ensembl:ENSDART00000112380 GeneID:560477 KEGG:dre:560477
NextBio:20883461 Bgee:F1RDN1 Uniprot:F1RDN1
Length = 1390
Score = 701 (251.8 bits), Expect = 8.2e-66, P = 8.2e-66
Identities = 173/532 (32%), Positives = 277/532 (52%)
Query: 556 KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKK-KVNG------- 607
KL +YQ G+ WM L GIL DEMGLGKTIQ IA + L K K G
Sbjct: 483 KLFKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKLKTRGSNYRYAG 542
Query: 608 --PFLIIVPLSTLSNWSLEFERWAPSVNVVAYK--GSPHLRKT-LQAQMKASKFNVLLTT 662
P +I+ P + + W EF W P V GS +K L ++ AS +L+T+
Sbjct: 543 LGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHDTGSFTSKKEKLIPEIVASH-GILITS 601
Query: 663 YEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLP 722
Y Y+ + + + W Y+I+DEGH+++N + +T F PHR +L+G+P+QN L
Sbjct: 602 YSYIRIMQDYIQRYDWHYVILDEGHKIRNPNAGVTTACKQFRT-PHRFILSGSPMQNNLK 660
Query: 723 ELWALLNFLLPSIFKSVSTFEQWFNAPFATTG----EKVELNEEETILIIRRLHKVLRPF 778
ELW+L +F+ P ++ F + F+ P G V++ + L + P+
Sbjct: 661 ELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQVQTAYKCACV--LRDTINPY 718
Query: 779 LLRRLKKEVESQL--PDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXX 836
LLRR+K +V++ L PDK E ++ C ++ Q+ +Y+ D E
Sbjct: 719 LLRRMKADVKANLSLPDKNEQVLFCRLTEDQRQVYQ-------TFLDSKEVYQILNGDMQ 771
Query: 837 XLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDL--YRVSGKFELLDRILPKL 894
+ + ++ LRK+CNHP +F + + + ++ SGK +++ +L
Sbjct: 772 -VFSGLIALRKICNHPDLFTG-GPRLLRGIPHDQLTEEEHFGYWKRSGKMIVVESLLRLW 829
Query: 895 KSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIF 954
GHRVLLF Q Q++ ILE + GF Y+++DGTT R L+ +FN + + F+F
Sbjct: 830 HKQGHRVLLFTQSRQMLEILEVFVKENGFSYLKMDGTTTIASRQPLIAQFNQ-NKDIFVF 888
Query: 955 VLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEE 1014
+L+TR GGLG+NL A+ V+I+D DWNP D QA++RA RIGQK +V V RL+T ++EE
Sbjct: 889 ILTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKQQVTVYRLLTAGTIEE 948
Query: 1015 RILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAV 1066
+I +K + +V++ + ++ ++ L T+ D + E +A+
Sbjct: 949 KIYHRQIFKQFLTNRVLKDPKQRRFFKSNDIYE-LFTLSSPDGSQGTETSAI 999
>POMBASE|SPAC25A8.01c [details] [associations]
symbol:fft3 "fun thirty related protein Fft3"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0003677 "DNA binding" evidence=ISM]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0032017 "positive regulation of Ran
protein signal transduction" evidence=IGI] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC25A8.01c GO:GO:0005524 EMBL:CU329670
GO:GO:0003677 GO:GO:0006338 GO:GO:0000790 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 GO:GO:0008094 OrthoDB:EOG4BCHW4 EMBL:AB027947
PIR:T38371 RefSeq:NP_593617.1 ProteinModelPortal:O42861
STRING:O42861 EnsemblFungi:SPAC25A8.01c.1 GeneID:2541531
KEGG:spo:SPAC25A8.01c HOGENOM:HOG000195581 OMA:NRASERY
NextBio:20802628 GO:GO:0032017 Uniprot:O42861
Length = 922
Score = 453 (164.5 bits), Expect = 1.0e-65, Sum P(2) = 1.0e-65
Identities = 119/331 (35%), Positives = 176/331 (53%)
Query: 544 IVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKK 603
I T AS + KL++YQI G+ W+ L+ L GILADEMGLGKT QTIA + LM+K
Sbjct: 374 ITTPPASFSPDIKLQDYQIIGINWLYLLYELKLAGILADEMGLGKTCQTIAFFSLLMDKN 433
Query: 604 KVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASK--FNVLLT 661
+NGP L+I P ST+ NW EF ++ P + + Y GS R+ ++ ++ ++K +NV+LT
Sbjct: 434 -INGPHLVIAPASTMENWLREFAKFCPKLKIELYYGSQVEREEIRERINSNKDSYNVMLT 492
Query: 662 TYEYVIKDKGP---LAKLHWKYMIIDEGHRMKNHHC-KLTHILNTFYVAPHRLLLTGTPL 717
TY K L + + DEGH +KN + H+++ A R+LLTGTPL
Sbjct: 493 TYRLAATSKADRLFLRNQKFNVCVYDEGHYLKNRASERYRHLMSI--PADFRVLLTGTPL 550
Query: 718 QNKLPELWALLNFLLPSIF----KSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHK 773
QN L EL +LL F+LP +F KS+ +P + E+ L+E+ + R
Sbjct: 551 QNNLKELISLLAFILPHVFDYGLKSLDVIFTMKKSP-ESDFERALLSEQR----VSRAKM 605
Query: 774 VLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK---GILLTDG-SEXXX 829
++ PF+LRR K +V LP K I C+ S ++ Y +K LL + +
Sbjct: 606 MMAPFVLRRKKSQVLDALPKKTRIIEFCEFSEEERRRYDDFASKQSVNSLLDENVMKTNL 665
Query: 830 XXXXXXXXLMNT----IVQLRKLCNHPFMFQ 856
+T +VQLRKL +HP +F+
Sbjct: 666 DTNANLAKKKSTAGFVLVQLRKLADHPMLFR 696
Score = 303 (111.7 bits), Expect = 1.0e-65, Sum P(2) = 1.0e-65
Identities = 61/145 (42%), Positives = 92/145 (63%)
Query: 883 KFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLK 942
K L ++L G RV+LF Q TQ+++IL+ K++R DG+T+ + R DL+
Sbjct: 762 KVRKLKKLLTNAVENGDRVVLFSQFTQVLDILQLVMKSLNLKFLRFDGSTQVDFRQDLID 821
Query: 943 KFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVR 1002
+F A D +F+LST+AGG G+NL A+ VI++D +NP DLQA+DRAHR+GQK EV
Sbjct: 822 QFYA-DESINVFLLSTKAGGFGINLACANMVILYDVSFNPFDDLQAEDRAHRVGQKKEVT 880
Query: 1003 VLRLMTVNSVEERILAAARYKLNMD 1027
V + + +++EE I A K+ +D
Sbjct: 881 VYKFVVKDTIEEHIQRLANAKIALD 905
>UNIPROTKB|F1P0A4 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR020838 Pfam:PF00176 Pfam:PF13892 GO:GO:0005524
GO:GO:0003677 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016817 GeneTree:ENSGT00680000100002 EMBL:AADN02016239
EMBL:AADN02016240 IPI:IPI00819661 Ensembl:ENSGALT00000038610
ArrayExpress:F1P0A4 Uniprot:F1P0A4
Length = 469
Score = 675 (242.7 bits), Expect = 1.3e-65, P = 1.3e-65
Identities = 137/314 (43%), Positives = 194/314 (61%)
Query: 547 EQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVN 606
E S + GKL++YQ++GL W++SL+ N +NGILADEMGLGKT+QTI+L+ Y+ + +
Sbjct: 155 ESPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 214
Query: 607 GPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEY 665
GP +++VP STL NW EF+RW P++ V G R ++ + +++V +T+YE
Sbjct: 215 GPHMVLVPKSTLHNWMNEFKRWVPTLRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEM 274
Query: 666 VIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELW 725
+IK+K K +W+Y++IDE HR+KN KL+ I+ F +RLLLTGTPLQN L ELW
Sbjct: 275 LIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTT-NRLLLTGTPLQNNLHELW 333
Query: 726 ALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 785
ALLNFLLP +F S F+ WF+ +K ++ RLH VLRPFLLRR+K
Sbjct: 334 ALLNFLLPDVFNSSEDFDSWFDTNNCLGDQK----------LVERLHMVLRPFLLRRIKA 383
Query: 786 EVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQL 845
+VE LP K E I +S +Q R +T+ IL+ D L+N ++QL
Sbjct: 384 DVEKSLPPKKEVKIYVGLSKMQ----REWYTR-ILMKDIDILNSAGKLDKMRLLNILMQL 438
Query: 846 RKLCNHPFMFQNIE 859
RK CNHP++F E
Sbjct: 439 RKCCNHPYLFDGAE 452
>FB|FBgn0022787 [details] [associations]
symbol:Hel89B "Helicase 89B" species:7227 "Drosophila
melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0006963 "positive regulation of antibacterial
peptide biosynthetic process" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0045087 "innate immune
response" evidence=IMP] [GO:0008063 "Toll signaling pathway"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0042742 GO:GO:0045087
GO:GO:0004003 GO:GO:0019730 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008063 GO:GO:0006963
InterPro:IPR022707 Pfam:PF12054 EMBL:AF033104
ProteinModelPortal:Q71V44 SMR:Q71V44 STRING:Q71V44 PaxDb:Q71V44
PRIDE:Q71V44 FlyBase:FBgn0022787 InParanoid:Q71V44
OrthoDB:EOG4ZGMT5 ArrayExpress:Q71V44 Bgee:Q71V44 Uniprot:Q71V44
Length = 1924
Score = 436 (158.5 bits), Expect = 3.8e-65, Sum P(2) = 3.8e-65
Identities = 107/325 (32%), Positives = 175/325 (53%)
Query: 553 VNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALIT----YLMEKKKVNGP 608
++ +L+ YQ G+ W+ L NL+GIL D+MGLGKT+QTI ++ + N P
Sbjct: 1347 ISVELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILAGDHMHRQTANLANLP 1406
Query: 609 FLIIVPLSTLSNWSLEFERWAPSVNVVA---YKGSPHLRKTLQAQMKASKFNVLLTTYEY 665
L+I P + +W E E++ +V+ Y G P R+ L++ + +K N+++ +Y+
Sbjct: 1407 SLVICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVGREKLRSDI-GTKCNLVVASYDT 1465
Query: 666 VIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELW 725
V KD + +H+ Y ++DEGH +KN K + + A HRL+L+GTP+QN + ELW
Sbjct: 1466 VRKDIDFFSGIHFNYCVLDEGHIIKNGKTKSSKAIKRLK-ANHRLILSGTPIQNNVLELW 1524
Query: 726 ALLNFLLPSIFKSVSTFEQWFNAPFATTGE-KVELNEEET-ILIIRRLHKVLRPFLLRRL 783
+L +FL+P + F Q F+ P ++ + K E+E +L + LH+ + PFLLRR+
Sbjct: 1525 SLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSSAKEQEAGVLAMEALHRQVLPFLLRRV 1584
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYR---HMHTKGIL--LTDGSEXXXXXX--XXXX 836
K++V LP K+ + C++S LQ LY + H K L L D S
Sbjct: 1585 KEDVLKDLPPKITQDLLCELSPLQLRLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKT 1644
Query: 837 XLMNTIVQLRKLCNHP-FMFQNIEE 860
+ + L+ +CNHP + + EE
Sbjct: 1645 HIFQALRYLQNVCNHPKLVLRQSEE 1669
Score = 327 (120.2 bits), Expect = 3.8e-65, Sum P(2) = 3.8e-65
Identities = 87/252 (34%), Positives = 129/252 (51%)
Query: 811 YRHMHTKGIL--LTDGSEXXXXXX--XXXXXLMNTIVQLRKLCNHP-FMFQNIEE--KFS 863
+ + H K L L D S + + L+ +CNHP + + EE K +
Sbjct: 1615 FSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSEELTKVT 1674
Query: 864 DHVGGSGIVSGPDLYRVSGKFELLDRIL------PKLKSTG-HRVLLFCQMTQLMNILED 916
+ S S D S K L ++L + +S HR L+FCQ+ +++I+E
Sbjct: 1675 SQLALSN--SSLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEQ 1732
Query: 917 YFSYR---GFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTV 973
R Y+RLDG+ A R D++ FN+ D + +L+T GGLGLNL ADTV
Sbjct: 1733 DLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNS-DPSIDVLLLTTMVGGLGLNLTGADTV 1791
Query: 974 IIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1033
I + DWNP +DLQA DRAHRIGQK V V RL+T NS+EE+I+ ++K+ V+ A
Sbjct: 1792 IFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKILTANTVVSA 1851
Query: 1034 GMFDQKSTGSER 1045
++ G+ +
Sbjct: 1852 ENASLQTMGTSQ 1863
>RGD|1308832 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10116 "Rattus norvegicus" [GO:0000183 "chromatin silencing
at rDNA" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005677 "chromatin silencing complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006333 "chromatin assembly or disassembly"
evidence=ISO] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0009790
"embryo development" evidence=ISO] [GO:0016584 "nucleosome
positioning" evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0031213 "RSF
complex" evidence=ISO] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0043596 "nuclear
replication fork" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1308832 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
IPI:IPI00359419 PRIDE:F1LNL2 Ensembl:ENSRNOT00000024568
UCSC:RGD:1308832 ArrayExpress:F1LNL2 Uniprot:F1LNL2
Length = 1051
Score = 672 (241.6 bits), Expect = 4.6e-65, Sum P(2) = 4.6e-65
Identities = 134/306 (43%), Positives = 191/306 (62%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
GKL++YQ++GL W++SL+ N +NGILADEMGLGKT+QTI+L+ Y+ + + GP +++VP
Sbjct: 177 GKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVP 236
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEYVIKDKGPL 673
STL NW EF+RW P++ V G R ++ + +++V +T+YE +IK+K
Sbjct: 237 KSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVF 296
Query: 674 AKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLNFLLP 733
K +W+Y++IDE HR+KN KL+ I+ F +RLLLTGTPLQN L ELW+LLNFLLP
Sbjct: 297 KKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTT-NRLLLTGTPLQNNLHELWSLLNFLLP 355
Query: 734 SIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPD 793
+F S F+ WF+ +K ++ RLH VLRPFLLRR+K +VE LP
Sbjct: 356 DVFNSADDFDSWFDTNNCLGDQK----------LVERLHMVLRPFLLRRIKADVEKSLPP 405
Query: 794 KVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPF 853
K E I +S +Q R +T+ IL+ D L+N ++QLRK CNHP+
Sbjct: 406 KKEVKIYVGLSKMQ----REWYTR-ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPY 460
Query: 854 MFQNIE 859
+F E
Sbjct: 461 LFDGAE 466
Score = 641 (230.7 bits), Expect = 5.4e-59, Sum P(2) = 5.4e-59
Identities = 141/317 (44%), Positives = 191/317 (60%)
Query: 767 IIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q R +T+ IL+ D
Sbjct: 379 LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQ----REWYTR-ILMKDIDI 433
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFEL 886
L+N ++QLRK CNHP++F E G + L SGK +
Sbjct: 434 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP-------GPPYTTDMHLVTNSGKMVV 486
Query: 887 LDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNA 946
LD++LPKLK G RVL+F QMT++++ILEDY +R ++Y RLDG T ++R D + +N
Sbjct: 487 LDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNE 546
Query: 947 PDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 1006
P+S F+F+LSTRAGGLG+NL TAD VI++DSDWNP DLQA DRAHRIGQ VRV R
Sbjct: 547 PNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRF 606
Query: 1007 MTVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEENA 1065
+T N+VEERI+ A KL +D VIQ G + DQ + + LQ I H + +
Sbjct: 607 ITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVFASKES 666
Query: 1066 VPDDETVNQMLARSEEE 1082
DE ++ +L R ++
Sbjct: 667 EITDEDIDGILERGAKK 683
Score = 64 (27.6 bits), Expect = 4.6e-65, Sum P(2) = 4.6e-65
Identities = 46/196 (23%), Positives = 91/196 (46%)
Query: 968 QTADTVIIFDSD-WNPHQDLQAQDRAHRIGQKNEVRVLRLMTVN-SVEERILAAARYKLN 1025
+T + VI + + W +LQ ++ ++ E R+ R +++ +++ +I RYK
Sbjct: 874 KTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKI---GRYKAP 930
Query: 1026 MDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQT 1085
+ I G K+ E +FL +LH+ + +EN DE + Q + R+ +F+
Sbjct: 931 FHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFD--KENVY--DE-LRQCI-RNSPQFRF 984
Query: 1086 YQRIDAERRKE-QGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRK 1144
+ + E Q + + LI + E +E+ E+E E ++ EK + S Q++
Sbjct: 985 DWFLKSRTAMELQRRCNTLITLIE------RENMELE----EKEKAEKKKRGPKPSTQKR 1034
Query: 1145 QVDYT-DSLTEKEWLK 1159
++D D K+ LK
Sbjct: 1035 KMDGAPDGRGRKKKLK 1050
Score = 41 (19.5 bits), Expect = 1.2e-62, Sum P(2) = 1.2e-62
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E + DI+KI+ +IE G+
Sbjct: 886 FWERCNELQDIEKIMAQIERGE 907
>UNIPROTKB|O60264 [details] [associations]
symbol:SMARCA5 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 5"
species:9606 "Homo sapiens" [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0009790 "embryo
development" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0031213 "RSF
complex" evidence=IPI] [GO:0042393 "histone binding" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016589 "NURF complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0034080
"CENP-A containing nucleosome assembly at centromere" evidence=TAS]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0006352 GO:GO:0006357 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
GO:GO:0034080 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016584 GO:GO:0005677
GO:GO:0016589 HOGENOM:HOG000192862 KO:K11654 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 HOVERGEN:HBG056329 OrthoDB:EOG44J2H9
EMBL:AB010882 EMBL:BC023144 IPI:IPI00297211 RefSeq:NP_003592.3
UniGene:Hs.558422 ProteinModelPortal:O60264 SMR:O60264
IntAct:O60264 MINT:MINT-2981772 STRING:O60264 PhosphoSite:O60264
PaxDb:O60264 PeptideAtlas:O60264 PRIDE:O60264 DNASU:8467
Ensembl:ENST00000283131 GeneID:8467 KEGG:hsa:8467 UCSC:uc003ijg.3
CTD:8467 GeneCards:GC04P144434 HGNC:HGNC:11101 HPA:CAB005227
HPA:HPA008751 MIM:603375 neXtProt:NX_O60264 PharmGKB:PA35951
InParanoid:O60264 PhylomeDB:O60264 GenomeRNAi:8467 NextBio:31688
ArrayExpress:O60264 Bgee:O60264 CleanEx:HS_SMARCA5
Genevestigator:O60264 GermOnline:ENSG00000153147 Uniprot:O60264
Length = 1052
Score = 672 (241.6 bits), Expect = 4.6e-65, Sum P(2) = 4.6e-65
Identities = 134/306 (43%), Positives = 191/306 (62%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
GKL++YQ++GL W++SL+ N +NGILADEMGLGKT+QTI+L+ Y+ + + GP +++VP
Sbjct: 178 GKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVP 237
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEYVIKDKGPL 673
STL NW EF+RW P++ V G R ++ + +++V +T+YE +IK+K
Sbjct: 238 KSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVF 297
Query: 674 AKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLNFLLP 733
K +W+Y++IDE HR+KN KL+ I+ F +RLLLTGTPLQN L ELW+LLNFLLP
Sbjct: 298 KKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTT-NRLLLTGTPLQNNLHELWSLLNFLLP 356
Query: 734 SIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPD 793
+F S F+ WF+ +K ++ RLH VLRPFLLRR+K +VE LP
Sbjct: 357 DVFNSADDFDSWFDTNNCLGDQK----------LVERLHMVLRPFLLRRIKADVEKSLPP 406
Query: 794 KVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPF 853
K E I +S +Q R +T+ IL+ D L+N ++QLRK CNHP+
Sbjct: 407 KKEVKIYVGLSKMQ----REWYTR-ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPY 461
Query: 854 MFQNIE 859
+F E
Sbjct: 462 LFDGAE 467
Score = 641 (230.7 bits), Expect = 5.5e-59, Sum P(2) = 5.5e-59
Identities = 141/317 (44%), Positives = 191/317 (60%)
Query: 767 IIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q R +T+ IL+ D
Sbjct: 380 LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQ----REWYTR-ILMKDIDI 434
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFEL 886
L+N ++QLRK CNHP++F E G + L SGK +
Sbjct: 435 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP-------GPPYTTDMHLVTNSGKMVV 487
Query: 887 LDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNA 946
LD++LPKLK G RVL+F QMT++++ILEDY +R ++Y RLDG T ++R D + +N
Sbjct: 488 LDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNE 547
Query: 947 PDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 1006
P+S F+F+LSTRAGGLG+NL TAD VI++DSDWNP DLQA DRAHRIGQ VRV R
Sbjct: 548 PNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRF 607
Query: 1007 MTVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEENA 1065
+T N+VEERI+ A KL +D VIQ G + DQ + + LQ I H + +
Sbjct: 608 ITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVFASKES 667
Query: 1066 VPDDETVNQMLARSEEE 1082
DE ++ +L R ++
Sbjct: 668 EITDEDIDGILERGAKK 684
Score = 64 (27.6 bits), Expect = 4.6e-65, Sum P(2) = 4.6e-65
Identities = 46/196 (23%), Positives = 91/196 (46%)
Query: 968 QTADTVIIFDSD-WNPHQDLQAQDRAHRIGQKNEVRVLRLMTVN-SVEERILAAARYKLN 1025
+T + VI + + W +LQ ++ ++ E R+ R +++ +++ +I RYK
Sbjct: 875 KTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKI---GRYKAP 931
Query: 1026 MDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQT 1085
+ I G K+ E +FL +LH+ + +EN DE + Q + R+ +F+
Sbjct: 932 FHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFD--KENVY--DE-LRQCI-RNSPQFRF 985
Query: 1086 YQRIDAERRKE-QGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRK 1144
+ + E Q + + LI + E +E+ E+E E ++ EK + S Q++
Sbjct: 986 DWFLKSRTAMELQRRCNTLITLIE------RENMELE----EKEKAEKKKRGPKPSTQKR 1035
Query: 1145 QVDYT-DSLTEKEWLK 1159
++D D K+ LK
Sbjct: 1036 KMDGAPDGRGRKKKLK 1051
Score = 41 (19.5 bits), Expect = 1.2e-62, Sum P(2) = 1.2e-62
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E + DI+KI+ +IE G+
Sbjct: 887 FWERCNELQDIEKIMAQIERGE 908
>UNIPROTKB|F1N052 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 EMBL:DAAA02044371 IPI:IPI00868566 UniGene:Bt.103096
Ensembl:ENSBTAT00000004408 Uniprot:F1N052
Length = 1052
Score = 672 (241.6 bits), Expect = 4.6e-65, Sum P(2) = 4.6e-65
Identities = 134/306 (43%), Positives = 191/306 (62%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
GKL++YQ++GL W++SL+ N +NGILADEMGLGKT+QTI+L+ Y+ + + GP +++VP
Sbjct: 178 GKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVP 237
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEYVIKDKGPL 673
STL NW EF+RW P++ V G R ++ + +++V +T+YE +IK+K
Sbjct: 238 KSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVF 297
Query: 674 AKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLNFLLP 733
K +W+Y++IDE HR+KN KL+ I+ F +RLLLTGTPLQN L ELW+LLNFLLP
Sbjct: 298 KKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTT-NRLLLTGTPLQNNLHELWSLLNFLLP 356
Query: 734 SIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPD 793
+F S F+ WF+ +K ++ RLH VLRPFLLRR+K +VE LP
Sbjct: 357 DVFNSADDFDSWFDTNNCLGDQK----------LVERLHMVLRPFLLRRIKADVEKSLPP 406
Query: 794 KVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPF 853
K E I +S +Q R +T+ IL+ D L+N ++QLRK CNHP+
Sbjct: 407 KKEVKIYVGLSKMQ----REWYTR-ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPY 461
Query: 854 MFQNIE 859
+F E
Sbjct: 462 LFDGAE 467
Score = 637 (229.3 bits), Expect = 1.6e-58, Sum P(2) = 1.6e-58
Identities = 140/317 (44%), Positives = 191/317 (60%)
Query: 767 IIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q R +T+ IL+ D
Sbjct: 380 LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQ----REWYTR-ILMKDIDI 434
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFEL 886
L+N ++QLRK CNHP++F E G + L SGK +
Sbjct: 435 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP-------GPPYTTDMHLVTNSGKMVV 487
Query: 887 LDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNA 946
LD++LPKLK G RVL+F QMT++++ILEDY +R ++Y RLDG T ++R + + +N
Sbjct: 488 LDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNE 547
Query: 947 PDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 1006
P+S F+F+LSTRAGGLG+NL TAD VI++DSDWNP DLQA DRAHRIGQ VRV R
Sbjct: 548 PNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRF 607
Query: 1007 MTVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEENA 1065
+T N+VEERI+ A KL +D VIQ G + DQ + + LQ I H + +
Sbjct: 608 ITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVFASKES 667
Query: 1066 VPDDETVNQMLARSEEE 1082
DE ++ +L R ++
Sbjct: 668 EITDEDIDGILERGAKK 684
Score = 64 (27.6 bits), Expect = 4.6e-65, Sum P(2) = 4.6e-65
Identities = 46/196 (23%), Positives = 91/196 (46%)
Query: 968 QTADTVIIFDSD-WNPHQDLQAQDRAHRIGQKNEVRVLRLMTVN-SVEERILAAARYKLN 1025
+T + VI + + W +LQ ++ ++ E R+ R +++ +++ +I RYK
Sbjct: 875 KTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKI---GRYKAP 931
Query: 1026 MDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQT 1085
+ I G K+ E +FL +LH+ + +EN DE + Q + R+ +F+
Sbjct: 932 FHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFD--KENVY--DE-LRQCI-RNSPQFRF 985
Query: 1086 YQRIDAERRKE-QGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRK 1144
+ + E Q + + LI + E +E+ E+E E ++ EK + S Q++
Sbjct: 986 DWFLKSRTAMELQRRCNTLITLIE------RENMELE----EKEKAEKKKRGPKPSTQKR 1035
Query: 1145 QVDYT-DSLTEKEWLK 1159
++D D K+ LK
Sbjct: 1036 KMDGAPDGRGRKKKLK 1051
Score = 41 (19.5 bits), Expect = 1.2e-62, Sum P(2) = 1.2e-62
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E + DI+KI+ +IE G+
Sbjct: 887 FWERCNELQDIEKIMAQIERGE 908
>UNIPROTKB|E2QWV0 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043596 "nuclear replication fork"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0009790
"embryo development" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302 GO:GO:0004386
GO:GO:0000793 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0005677 GO:GO:0016589 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213 CTD:8467
EMBL:AAEX03010002 RefSeq:XP_532676.1 ProteinModelPortal:E2QWV0
Ensembl:ENSCAFT00000012062 GeneID:475451 KEGG:cfa:475451
NextBio:20851293 Uniprot:E2QWV0
Length = 1052
Score = 672 (241.6 bits), Expect = 4.6e-65, Sum P(2) = 4.6e-65
Identities = 134/306 (43%), Positives = 191/306 (62%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
GKL++YQ++GL W++SL+ N +NGILADEMGLGKT+QTI+L+ Y+ + + GP +++VP
Sbjct: 178 GKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVP 237
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEYVIKDKGPL 673
STL NW EF+RW P++ V G R ++ + +++V +T+YE +IK+K
Sbjct: 238 KSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVF 297
Query: 674 AKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLNFLLP 733
K +W+Y++IDE HR+KN KL+ I+ F +RLLLTGTPLQN L ELW+LLNFLLP
Sbjct: 298 KKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTT-NRLLLTGTPLQNNLHELWSLLNFLLP 356
Query: 734 SIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPD 793
+F S F+ WF+ +K ++ RLH VLRPFLLRR+K +VE LP
Sbjct: 357 DVFNSADDFDSWFDTNNCLGDQK----------LVERLHMVLRPFLLRRIKADVEKSLPP 406
Query: 794 KVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPF 853
K E I +S +Q R +T+ IL+ D L+N ++QLRK CNHP+
Sbjct: 407 KKEVKIYVGLSKMQ----REWYTR-ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPY 461
Query: 854 MFQNIE 859
+F E
Sbjct: 462 LFDGAE 467
Score = 637 (229.3 bits), Expect = 1.6e-58, Sum P(2) = 1.6e-58
Identities = 140/317 (44%), Positives = 191/317 (60%)
Query: 767 IIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q R +T+ IL+ D
Sbjct: 380 LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQ----REWYTR-ILMKDIDI 434
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFEL 886
L+N ++QLRK CNHP++F E G + L SGK +
Sbjct: 435 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP-------GPPYTTDMHLVTNSGKMVV 487
Query: 887 LDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNA 946
LD++LPKLK G RVL+F QMT++++ILEDY +R ++Y RLDG T ++R + + +N
Sbjct: 488 LDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNE 547
Query: 947 PDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 1006
P+S F+F+LSTRAGGLG+NL TAD VI++DSDWNP DLQA DRAHRIGQ VRV R
Sbjct: 548 PNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRF 607
Query: 1007 MTVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEENA 1065
+T N+VEERI+ A KL +D VIQ G + DQ + + LQ I H + +
Sbjct: 608 ITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVFASKES 667
Query: 1066 VPDDETVNQMLARSEEE 1082
DE ++ +L R ++
Sbjct: 668 EITDEDIDGILERGAKK 684
Score = 64 (27.6 bits), Expect = 4.6e-65, Sum P(2) = 4.6e-65
Identities = 46/196 (23%), Positives = 91/196 (46%)
Query: 968 QTADTVIIFDSD-WNPHQDLQAQDRAHRIGQKNEVRVLRLMTVN-SVEERILAAARYKLN 1025
+T + VI + + W +LQ ++ ++ E R+ R +++ +++ +I RYK
Sbjct: 875 KTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKI---GRYKAP 931
Query: 1026 MDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQT 1085
+ I G K+ E +FL +LH+ + +EN DE + Q + R+ +F+
Sbjct: 932 FHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFD--KENVY--DE-LRQCI-RNSPQFRF 985
Query: 1086 YQRIDAERRKE-QGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRK 1144
+ + E Q + + LI + E +E+ E+E E ++ EK + S Q++
Sbjct: 986 DWFLKSRTAMELQRRCNTLITLIE------RENMELE----EKEKAEKKKRGPKPSTQKR 1035
Query: 1145 QVDYT-DSLTEKEWLK 1159
++D D K+ LK
Sbjct: 1036 KMDGAPDGRGRKKKLK 1051
Score = 41 (19.5 bits), Expect = 1.2e-62, Sum P(2) = 1.2e-62
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E + DI+KI+ +IE G+
Sbjct: 887 FWERCNELQDIEKIMAQIERGE 908
>UNIPROTKB|F1RRG9 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 CTD:8467 EMBL:CU463195 RefSeq:XP_003129222.2
UniGene:Ssc.97261 Ensembl:ENSSSCT00000009907 GeneID:100188903
KEGG:ssc:100188903 ArrayExpress:F1RRG9 Uniprot:F1RRG9
Length = 1052
Score = 672 (241.6 bits), Expect = 4.6e-65, Sum P(2) = 4.6e-65
Identities = 134/306 (43%), Positives = 191/306 (62%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
GKL++YQ++GL W++SL+ N +NGILADEMGLGKT+QTI+L+ Y+ + + GP +++VP
Sbjct: 178 GKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVP 237
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEYVIKDKGPL 673
STL NW EF+RW P++ V G R ++ + +++V +T+YE +IK+K
Sbjct: 238 KSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVF 297
Query: 674 AKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLNFLLP 733
K +W+Y++IDE HR+KN KL+ I+ F +RLLLTGTPLQN L ELW+LLNFLLP
Sbjct: 298 KKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTT-NRLLLTGTPLQNNLHELWSLLNFLLP 356
Query: 734 SIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPD 793
+F S F+ WF+ +K ++ RLH VLRPFLLRR+K +VE LP
Sbjct: 357 DVFNSADDFDSWFDTNNCLGDQK----------LVERLHMVLRPFLLRRIKADVEKSLPP 406
Query: 794 KVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPF 853
K E I +S +Q R +T+ IL+ D L+N ++QLRK CNHP+
Sbjct: 407 KKEVKIYVGLSKMQ----REWYTR-ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPY 461
Query: 854 MFQNIE 859
+F E
Sbjct: 462 LFDGAE 467
Score = 637 (229.3 bits), Expect = 1.6e-58, Sum P(2) = 1.6e-58
Identities = 140/317 (44%), Positives = 191/317 (60%)
Query: 767 IIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q R +T+ IL+ D
Sbjct: 380 LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQ----REWYTR-ILMKDIDI 434
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFEL 886
L+N ++QLRK CNHP++F E G + L SGK +
Sbjct: 435 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP-------GPPYTTDMHLVTNSGKMVV 487
Query: 887 LDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNA 946
LD++LPKLK G RVL+F QMT++++ILEDY +R ++Y RLDG T ++R + + +N
Sbjct: 488 LDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNE 547
Query: 947 PDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 1006
P+S F+F+LSTRAGGLG+NL TAD VI++DSDWNP DLQA DRAHRIGQ VRV R
Sbjct: 548 PNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRF 607
Query: 1007 MTVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEENA 1065
+T N+VEERI+ A KL +D VIQ G + DQ + + LQ I H + +
Sbjct: 608 ITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVFASKES 667
Query: 1066 VPDDETVNQMLARSEEE 1082
DE ++ +L R ++
Sbjct: 668 EITDEDIDGILERGAKK 684
Score = 64 (27.6 bits), Expect = 4.6e-65, Sum P(2) = 4.6e-65
Identities = 46/196 (23%), Positives = 91/196 (46%)
Query: 968 QTADTVIIFDSD-WNPHQDLQAQDRAHRIGQKNEVRVLRLMTVN-SVEERILAAARYKLN 1025
+T + VI + + W +LQ ++ ++ E R+ R +++ +++ +I RYK
Sbjct: 875 KTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKI---GRYKAP 931
Query: 1026 MDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQT 1085
+ I G K+ E +FL +LH+ + +EN DE + Q + R+ +F+
Sbjct: 932 FHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFD--KENVY--DE-LRQCI-RNSPQFRF 985
Query: 1086 YQRIDAERRKE-QGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRK 1144
+ + E Q + + LI + E +E+ E+E E ++ EK + S Q++
Sbjct: 986 DWFLKSRTAMELQRRCNTLITLIE------RENMELE----EKEKAEKKKRGPKPSTQKR 1035
Query: 1145 QVDYT-DSLTEKEWLK 1159
++D D K+ LK
Sbjct: 1036 KMDGAPDGRGRKKKLK 1051
Score = 41 (19.5 bits), Expect = 1.2e-62, Sum P(2) = 1.2e-62
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E + DI+KI+ +IE G+
Sbjct: 887 FWERCNELQDIEKIMAQIERGE 908
>UNIPROTKB|E2QSK6 [details] [associations]
symbol:ERCC6L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045494 "photoreceptor cell maintenance"
evidence=IEA] [GO:0032786 "positive regulation of DNA-dependent
transcription, elongation" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0010332 "response to gamma
radiation" evidence=IEA] [GO:0010224 "response to UV-B"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0009636 "response to toxic substance" evidence=IEA] [GO:0008630
"intrinsic apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0008023 "transcription elongation factor complex"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0007257 "activation of JUN kinase activity"
evidence=IEA] [GO:0007256 "activation of JNKK activity"
evidence=IEA] [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0000303 "response to superoxide"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0008630 GO:GO:0005730 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 GO:GO:0045494 GO:GO:0010332
GO:GO:0004386 GO:GO:0010165 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010224 GO:GO:0007257 GO:GO:0006283
GO:GO:0008094 GO:GO:0008023 GO:GO:0032786 GO:GO:0006290
GO:GO:0007256 GeneTree:ENSGT00590000083118 CTD:2074 KO:K10841
OMA:NGEMQIF GO:GO:0000303 EMBL:AAEX03015368 RefSeq:XP_534944.2
UniGene:Cfa.1909 Ensembl:ENSCAFT00000010674 GeneID:477747
KEGG:cfa:477747 NextBio:20853169 Uniprot:E2QSK6
Length = 1486
Score = 692 (248.7 bits), Expect = 8.8e-65, Sum P(3) = 8.8e-65
Identities = 163/495 (32%), Positives = 263/495 (53%)
Query: 556 KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKK----------KV 605
KL +YQ G+ W+ L GIL DEMGLGKTIQ IA + L K K
Sbjct: 502 KLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFKG 561
Query: 606 NGPFLIIVPLSTLSNWSLEFERWAPSVNV-VAYK-GSPHLRKTLQAQMKASKFNVLLTTY 663
GP +I+ P + + W EF W P V + ++ GS +K + A +L+T+Y
Sbjct: 562 LGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTQKKEKLIRDIAHCHGILITSY 621
Query: 664 EYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPE 723
Y+ + +++ W Y+I+DEGH+++N + +T F PHR++L+G+P+QN L E
Sbjct: 622 SYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRT-PHRIILSGSPMQNNLRE 680
Query: 724 LWALLNFLLPSIFKSVSTFEQWFNAPFATTG----EKVELNEEETILIIRRLHKVLRPFL 779
LW+L +F+ P ++ F + F+ P G V++ + L + P+L
Sbjct: 681 LWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV--LRDTINPYL 738
Query: 780 LRRLKKEVESQL--PDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXX 837
LRR+K +V+ L PDK E ++ C ++ Q +Y++ D E
Sbjct: 739 LRRMKSDVKMSLSLPDKNEQVLFCRLTEEQHKVYQNF-------IDSKEVYRILNGDMQ- 790
Query: 838 LMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKST 897
+ + +V LRK+CNHP +F + + ++ SGK +++ +L
Sbjct: 791 IFSGLVALRKICNHPDLFSGGPKNLKT-IPDDDEEDQFGYWKRSGKMIVVESLLKIWHKQ 849
Query: 898 GHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLS 957
G RVLLF Q Q+++ILE + + + Y+++DGTT R L+ ++N D+ F+F+L+
Sbjct: 850 GQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNE-DTSIFVFLLT 908
Query: 958 TRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERIL 1017
TR GG+G+NL A+ VII+D DWNP D QA++RA RIGQK +V V RL+T ++EE+I
Sbjct: 909 TRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIY 968
Query: 1018 AAARYKLNMDEKVIQ 1032
+K + +V++
Sbjct: 969 HRQIFKQFLTNRVLK 983
Score = 58 (25.5 bits), Expect = 8.8e-65, Sum P(3) = 8.8e-65
Identities = 29/130 (22%), Positives = 55/130 (42%)
Query: 178 HISSQIKQSKLTNIPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKA 237
+++ ++ K K + L + Q+R + +E ++E + SL E ++
Sbjct: 171 NVNRKLDSVKRQKYNKEQQLKKITAKQKRLQAILGGVEVQVELDHASL-----EEEDIEP 225
Query: 238 EIELRALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEK-LEKQ 296
++ Q E+I + T T + K+ K+ ++ L EA EK L Q
Sbjct: 226 GPSCLGSMLMPIQETAWEELIRTGQM-TPFGTQIPQKSEKKPRKLMLNEASGFEKYLADQ 284
Query: 297 QKVEAERKKR 306
K+ ERKK+
Sbjct: 285 AKLSFERKKQ 294
Score = 41 (19.5 bits), Expect = 6.8e-63, Sum P(3) = 6.8e-63
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 281 RQGLKEARATEKLEKQQKVEAERKKRQKHQEYITT 315
R GL + + T LE +++ E + EY+ T
Sbjct: 352 RVGLPKGKKT--LESDMRLKVEGNSEGEESEYLPT 384
Score = 38 (18.4 bits), Expect = 8.8e-65, Sum P(3) = 8.8e-65
Identities = 11/51 (21%), Positives = 26/51 (50%)
Query: 427 VKQKLMDTDGKVTLDQDETSQLTDMHISVREISSGKVLKGEDAPLAAHLKQ 477
++++ + G+V L + + + +DM + V S G+ + E P L++
Sbjct: 342 LQKRALHFQGRVGLPKGKKTLESDMRLKVEGNSEGE--ESEYLPTEEELEE 390
Score = 37 (18.1 bits), Expect = 6.8e-63, Sum P(3) = 6.8e-63
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 57 LQRAIDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQ 98
+ R +DS+K Q ++ + +K I K R + QV+
Sbjct: 172 VNRKLDSVKRQKYNKEQQLKK-ITAKQKRLQAILGGVEVQVE 212
>MGI|MGI:1935129 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IDA] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA] [GO:0006334 "nucleosome assembly"
evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO;IGI;IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0009790 "embryo development"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=ISO] [GO:0016589
"NURF complex" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0031213 "RSF complex" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;TAS] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00717
MGI:MGI:1935129 GO:GO:0005524 GO:GO:0045893 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0009790 GO:GO:0043596
GO:GO:0006333 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183
GO:GO:0006302 GO:GO:0004386 GO:GO:0000793 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213
HOVERGEN:HBG056329 OrthoDB:EOG44J2H9 CTD:8467 EMBL:AF375046
EMBL:AF325921 EMBL:BC021922 EMBL:BC053069 EMBL:AK039811
EMBL:AK052320 IPI:IPI00396739 RefSeq:NP_444354.2 UniGene:Mm.246803
ProteinModelPortal:Q91ZW3 SMR:Q91ZW3 DIP:DIP-36073N IntAct:Q91ZW3
MINT:MINT-1867515 STRING:Q91ZW3 PhosphoSite:Q91ZW3 PaxDb:Q91ZW3
PRIDE:Q91ZW3 Ensembl:ENSMUST00000043359 GeneID:93762 KEGG:mmu:93762
UCSC:uc009mja.1 InParanoid:Q91ZW3 NextBio:351651 Bgee:Q91ZW3
Genevestigator:Q91ZW3 GermOnline:ENSMUSG00000031715 Uniprot:Q91ZW3
Length = 1051
Score = 669 (240.6 bits), Expect = 1.0e-64, Sum P(2) = 1.0e-64
Identities = 133/306 (43%), Positives = 191/306 (62%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
GKL++YQ++GL W++SL+ N +NGILADEMGLGKT+QTI+L+ Y+ + + GP +++VP
Sbjct: 177 GKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVP 236
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEYVIKDKGPL 673
STL NW EF++W P++ V G R ++ + +++V +T+YE +IK+K
Sbjct: 237 KSTLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVF 296
Query: 674 AKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLNFLLP 733
K +W+Y++IDE HR+KN KL+ I+ F +RLLLTGTPLQN L ELW+LLNFLLP
Sbjct: 297 KKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTT-NRLLLTGTPLQNNLHELWSLLNFLLP 355
Query: 734 SIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPD 793
+F S F+ WF+ +K ++ RLH VLRPFLLRR+K +VE LP
Sbjct: 356 DVFNSADDFDSWFDTNNCLGDQK----------LVERLHMVLRPFLLRRIKADVEKSLPP 405
Query: 794 KVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPF 853
K E I +S +Q R +T+ IL+ D L+N ++QLRK CNHP+
Sbjct: 406 KKEVKIYVGLSKMQ----REWYTR-ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPY 460
Query: 854 MFQNIE 859
+F E
Sbjct: 461 LFDGAE 466
Score = 641 (230.7 bits), Expect = 5.4e-59, Sum P(2) = 5.4e-59
Identities = 141/317 (44%), Positives = 191/317 (60%)
Query: 767 IIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q R +T+ IL+ D
Sbjct: 379 LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQ----REWYTR-ILMKDIDI 433
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFEL 886
L+N ++QLRK CNHP++F E G + L SGK +
Sbjct: 434 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP-------GPPYTTDMHLVTNSGKMVV 486
Query: 887 LDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNA 946
LD++LPKLK G RVL+F QMT++++ILEDY +R ++Y RLDG T ++R D + +N
Sbjct: 487 LDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNE 546
Query: 947 PDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 1006
P+S F+F+LSTRAGGLG+NL TAD VI++DSDWNP DLQA DRAHRIGQ VRV R
Sbjct: 547 PNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRF 606
Query: 1007 MTVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEENA 1065
+T N+VEERI+ A KL +D VIQ G + DQ + + LQ I H + +
Sbjct: 607 ITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVFASKES 666
Query: 1066 VPDDETVNQMLARSEEE 1082
DE ++ +L R ++
Sbjct: 667 EITDEDIDGILERGAKK 683
Score = 64 (27.6 bits), Expect = 1.0e-64, Sum P(2) = 1.0e-64
Identities = 46/196 (23%), Positives = 91/196 (46%)
Query: 968 QTADTVIIFDSD-WNPHQDLQAQDRAHRIGQKNEVRVLRLMTVN-SVEERILAAARYKLN 1025
+T + VI + + W +LQ ++ ++ E R+ R +++ +++ +I RYK
Sbjct: 874 KTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKI---GRYKAP 930
Query: 1026 MDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQT 1085
+ I G K+ E +FL +LH+ + +EN DE + Q + R+ +F+
Sbjct: 931 FHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFD--KENVY--DE-LRQCI-RNSPQFRF 984
Query: 1086 YQRIDAERRKE-QGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRK 1144
+ + E Q + + LI + E +E+ E+E E ++ EK + S Q++
Sbjct: 985 DWFLKSRTAMELQRRCNTLITLIE------RENMELE----EKEKAEKKKRGPKPSTQKR 1034
Query: 1145 QVDYT-DSLTEKEWLK 1159
++D D K+ LK
Sbjct: 1035 KMDGAPDGRGRKKKLK 1050
Score = 41 (19.5 bits), Expect = 2.7e-62, Sum P(2) = 2.7e-62
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E + DI+KI+ +IE G+
Sbjct: 886 FWERCNELQDIEKIMAQIERGE 907
>UNIPROTKB|Q03468 [details] [associations]
symbol:ERCC6 "DNA excision repair protein ERCC-6"
species:9606 "Homo sapiens" [GO:0000303 "response to superoxide"
evidence=IEA] [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
[GO:0007256 "activation of JNKK activity" evidence=IEA] [GO:0007257
"activation of JUN kinase activity" evidence=IEA] [GO:0008630
"intrinsic apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0010224 "response to UV-B" evidence=IEA] [GO:0010332 "response
to gamma radiation" evidence=IEA] [GO:0045494 "photoreceptor cell
maintenance" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IDA] [GO:0047485 "protein N-terminus
binding" evidence=IPI] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0032784 "regulation of DNA-dependent
transcription, elongation" evidence=IDA] [GO:0008023 "transcription
elongation factor complex" evidence=IDA] [GO:0032786 "positive
regulation of DNA-dependent transcription, elongation"
evidence=IDA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP;TAS] [GO:0032403 "protein
complex binding" evidence=IDA] [GO:0009411 "response to UV"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA;TAS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006979
"response to oxidative stress" evidence=IDA] [GO:0006284
"base-excision repair" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006289 "nucleotide-excision repair" evidence=TAS]
Reactome:REACT_216 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0009411 GO:GO:0008630 GO:GO:0006979
GO:GO:0005730 GO:GO:0032403 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 Orphanet:279 GO:GO:0045494
GO:GO:0010332 GO:GO:0006366 GO:GO:0004386 GO:GO:0010165
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 EMBL:CH471187 GO:GO:0032786 GO:GO:0006290
GO:GO:0007256 Orphanet:1466 EMBL:L04791 EMBL:AY204752 EMBL:AL138760
IPI:IPI00414779 PIR:A44224 RefSeq:NP_000115.1 UniGene:Hs.654449
ProteinModelPortal:Q03468 SMR:Q03468 DIP:DIP-193N IntAct:Q03468
MINT:MINT-1193928 STRING:Q03468 PhosphoSite:Q03468 DMDM:416959
PaxDb:Q03468 PRIDE:Q03468 Ensembl:ENST00000355832 GeneID:2074
KEGG:hsa:2074 UCSC:uc001jhr.4 CTD:2074 GeneCards:GC10M050663
HGNC:HGNC:3438 MIM:133540 MIM:214150 MIM:278800 MIM:600630
MIM:609413 MIM:613761 neXtProt:NX_Q03468 Orphanet:90321
Orphanet:90322 Orphanet:90324 Orphanet:1569 Orphanet:178338
PharmGKB:PA27852 HOGENOM:HOG000170952 HOVERGEN:HBG051502
InParanoid:Q03468 KO:K10841 OMA:NGEMQIF OrthoDB:EOG476JZF
PhylomeDB:Q03468 ChiTaRS:ERCC6 GenomeRNAi:2074 NextBio:8437
ArrayExpress:Q03468 Bgee:Q03468 CleanEx:HS_ERCC6
Genevestigator:Q03468 GermOnline:ENSG00000032514 GO:GO:0000303
Uniprot:Q03468
Length = 1493
Score = 693 (249.0 bits), Expect = 3.0e-64, Sum P(3) = 3.0e-64
Identities = 167/530 (31%), Positives = 278/530 (52%)
Query: 556 KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKK-KVNG------- 607
KL +YQ G+ W+ L GIL DEMGLGKTIQ IA + L K + G
Sbjct: 506 KLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEG 565
Query: 608 --PFLIIVPLSTLSNWSLEFERWAPSVNV-VAYK-GS-PHLRKTLQAQMKASKFNVLLTT 662
P +I+ P + + W EF W P V + ++ GS H ++ L + A +L+T+
Sbjct: 566 LGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDV-AHCHGILITS 624
Query: 663 YEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLP 722
Y Y+ + +++ W Y+I+DEGH+++N + +T F PHR++L+G+P+QN L
Sbjct: 625 YSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRT-PHRIILSGSPMQNNLR 683
Query: 723 ELWALLNFLLPSIFKSVSTFEQWFNAPFATTG----EKVELNEEETILIIRRLHKVLRPF 778
ELW+L +F+ P ++ F + F+ P G V++ + L + P+
Sbjct: 684 ELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV--LRDTINPY 741
Query: 779 LLRRLKKEVESQL--PDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXX 836
LLRR+K +V+ L PDK E ++ C ++ Q +Y++ D E
Sbjct: 742 LLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNF-------VDSKEVYRILNGEMQ 794
Query: 837 XLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKS 896
+ + ++ LRK+CNHP +F + ++ SGK +++ +L
Sbjct: 795 -IFSGLIALRKICNHPDLFSGGPKNLKGLPDDELEEDQFGYWKRSGKMIVVESLLKIWHK 853
Query: 897 TGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVL 956
G RVLLF Q Q+++ILE + + + Y+++DGTT R L+ ++N D+ F+F+L
Sbjct: 854 QGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNE-DTSIFVFLL 912
Query: 957 STRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERI 1016
+TR GGLG+NL A+ V+I+D DWNP D QA++RA RIGQK +V V RL+T ++EE+I
Sbjct: 913 TTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKI 972
Query: 1017 LAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAV 1066
+K + +V++ + ++ ++ L T+ D + E +A+
Sbjct: 973 YHRQIFKQFLTNRVLKDPKQRRFFKSNDLYE-LFTLTSPDASQSTETSAI 1021
Score = 53 (23.7 bits), Expect = 3.0e-64, Sum P(3) = 3.0e-64
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 265 TTLETAVNVKAYKRTKRQGLKEARATEK-LEKQQKVEAERKKR 306
T T + K K+ ++ L EA EK L Q K+ ERKK+
Sbjct: 246 TPFGTQIPQKQEKKPRKIMLNEASGFEKYLADQAKLSFERKKQ 288
Score = 37 (18.1 bits), Expect = 3.0e-64, Sum P(3) = 3.0e-64
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 57 LQRAIDSMKEQGLEEDPRYQKLIEMKANRTEIKHAFTSAQVQ 98
+ R +DS+K Q ++ Q+L ++ A + ++ A+V+
Sbjct: 167 INRKLDSVKRQKYNKE---QQLKKITAKQKHLQAILGGAEVK 205
>WB|WBGene00002169 [details] [associations]
symbol:isw-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0040026 "positive regulation of vulval development"
evidence=IGI] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0016246 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000790 GO:GO:0040035 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 GO:GO:0040027 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GO:GO:0040026 EMBL:FO081312 PIR:S44645
RefSeq:NP_498468.2 ProteinModelPortal:P41877 SMR:P41877
STRING:P41877 PaxDb:P41877 EnsemblMetazoa:F37A4.8 GeneID:175944
KEGG:cel:CELE_F37A4.8 UCSC:F37A4.8 CTD:175944 WormBase:F37A4.8
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 InParanoid:P41877
KO:K11654 OMA:MQRKWYK NextBio:890418 SUPFAM:SSF101224
Uniprot:P41877
Length = 1009
Score = 660 (237.4 bits), Expect = 5.4e-64, Sum P(3) = 5.4e-64
Identities = 142/307 (46%), Positives = 195/307 (63%)
Query: 554 NGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIV 613
NG++++YQ++GL W+ SL +N +NGILADEMGLGKT+QTI++I Y+ K P L+IV
Sbjct: 129 NGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNKASPHLVIV 188
Query: 614 PLSTLSNWSLEFERWAPSVNVVAYKGSPHLR-KTLQAQMKASKFNVLLTTYEYVIKDKGP 672
P STL NW+ EF++W PS+N V G R + L+ + KF+V TTYE ++K K
Sbjct: 189 PKSTLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDVILPQKFDVCCTTYEMMLKVKTQ 248
Query: 673 LAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLNFLL 732
L KL+W+Y+IIDE HR+KN KL+ + + +RLL+TGTPLQN L ELWALLNFLL
Sbjct: 249 LKKLNWRYIIIDEAHRIKNEKSKLSETVRELN-SENRLLITGTPLQNNLHELWALLNFLL 307
Query: 733 PSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLP 792
P IF S F+ WF+ A +G N + +++RLHKVL+PFLLRR+K +VE L
Sbjct: 308 PDIFTSSDDFDSWFSND-AMSG-----NTD----LVQRLHKVLQPFLLRRIKSDVEKSLL 357
Query: 793 DKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHP 852
K E +K + GL K + R +TK +L+ D LMN ++ LRK NHP
Sbjct: 358 PKKE--VKVYV-GLSK-MQREWYTK-VLMKDIDIINGAGKVEKARLMNILMHLRKCVNHP 412
Query: 853 FMFQNIE 859
++F E
Sbjct: 413 YLFDGAE 419
Score = 634 (228.2 bits), Expect = 1.7e-59, Sum P(4) = 1.7e-59
Identities = 153/401 (38%), Positives = 233/401 (58%)
Query: 767 IIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
+++RLHKVL+PFLLRR+K +VE L K E +K + GL K + R +TK +L+ D
Sbjct: 332 LVQRLHKVLQPFLLRRIKSDVEKSLLPKKE--VKVYV-GLSK-MQREWYTK-VLMKDIDI 386
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFEL 886
LMN ++ LRK NHP++F E G + L SGK +
Sbjct: 387 INGAGKVEKARLMNILMHLRKCVNHPYLFDGAEP-------GPPFTTDQHLVDNSGKMVV 439
Query: 887 LDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNA 946
LD++L K K G RVL+F Q ++++++LED+ +R ++Y RLDG+T EDR + ++ +NA
Sbjct: 440 LDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYNA 499
Query: 947 PDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 1006
PDS+ FIF+L+TRAGGLG+NL TAD VII+DSDWNP DLQA DRAHRIGQK +VRV RL
Sbjct: 500 PDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRL 559
Query: 1007 MTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAV 1066
+T N+V+ERI+ A KL +D VIQ G + + + I H ++ +++
Sbjct: 560 ITENTVDERIIEKAEAKLRLDNIVIQQGRMSEAQKTLGKGDMISMIRHGAEQVFAAKDST 619
Query: 1067 PDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFE 1126
D+ ++ +L ++E + AE ++ GK I+ + L + +++ + + FE
Sbjct: 620 ISDDDIDTILEKAEVK-------TAELNEKMGK----IDENNLRNMTFEDNAKFTVYQFE 668
Query: 1127 AK--EEEKALHMGR-----GSRQRKQVDYTDSLTEKEWLKA 1160
+ + ++A MG R+RK +Y L KE ++A
Sbjct: 669 GENYKAKQADGMGHFWIEPPKRERK-ANYQVDLYYKEAMRA 708
Score = 61 (26.5 bits), Expect = 5.4e-64, Sum P(3) = 5.4e-64
Identities = 27/116 (23%), Positives = 57/116 (49%)
Query: 1013 EERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETV 1072
E++++ AR L E+ +A + Q T + +F Q + + +E+ E D E++
Sbjct: 773 EQKLINNAR-PLTDKEQEEKAELLTQSVTDWTKREFQQFV--RGNEKYGRE----DLESI 825
Query: 1073 NQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAK 1128
+ + R EE Q+Y ++ ER +E +++ E + I+ +++ A +AK
Sbjct: 826 AKEMERPLEEIQSYAKVFWERIEELQDSEKVLSQIEKGEARIQRKYAVKK-ALDAK 880
Score = 58 (25.5 bits), Expect = 1.1e-63, Sum P(3) = 1.1e-63
Identities = 37/171 (21%), Positives = 69/171 (40%)
Query: 980 WNPHQDLQAQDRAHRIGQKNEVRVLRLMTVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1038
W ++LQ ++ +K E R+ R V +++ +I A+YK + I G
Sbjct: 844 WERIEELQDSEKVLSQIEKGEARIQRKYAVKKALDAKI---AKYKAPFQQLRISYGTNKG 900
Query: 1039 KSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQG 1098
K+ E +FL H+ + +EN + +M + ++ R E ++
Sbjct: 901 KTYTEEEDRFLVCETHRLGHD--KENVFEELRQSVRMAPQFRFDWFLKSRTAMELQRRCN 958
Query: 1099 KKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDYT 1149
LIE E+ + +++ I A + K K L G+ K+V T
Sbjct: 959 TLITLIE-REMGE-VVESKPVIVTAADKKKSVAKDLSKSSGTPTAKKVKAT 1007
Score = 46 (21.3 bits), Expect = 6.4e-63, Sum P(4) = 6.4e-63
Identities = 11/44 (25%), Positives = 25/44 (56%)
Query: 1234 DSDGRVLSEPFIKLPSRKELPDYYEVIDRPMDIKKILGRIEDGK 1277
+S + + P ++ S ++ ++E I+ D +K+L +IE G+
Sbjct: 823 ESIAKEMERPLEEIQSYAKV--FWERIEELQDSEKVLSQIEKGE 864
Score = 43 (20.2 bits), Expect = 5.4e-64, Sum P(3) = 5.4e-64
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 189 TNIPKPEGLDPLI-ILQERENRVALNIERRIEEL 221
+NIP+ G DP + + E E+ A + +R E L
Sbjct: 19 SNIPESSGNDPSMEVDDEPESSDAADSFKRFERL 52
Score = 40 (19.1 bits), Expect = 6.4e-63, Sum P(4) = 6.4e-63
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 1129 EEEKALHMGRGSRQRKQVDYTDSLTEK--EWLK 1159
EE+K ++ R ++Q + + LT+ +W K
Sbjct: 772 EEQKLINNARPLTDKEQEEKAELLTQSVTDWTK 804
>UNIPROTKB|D3ZZZ1 [details] [associations]
symbol:Ercc6 "Protein Ercc6" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1311509
GO:GO:0005524 GO:GO:0008630 GO:GO:0005730 GO:GO:0006284
GO:GO:0003677 GO:GO:0009636 GO:GO:0003682 GO:GO:0045494
GO:GO:0010332 GO:GO:0004386 GO:GO:0010165 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010224 GO:GO:0007257
GO:GO:0006283 GO:GO:0008094 GO:GO:0008023 GO:GO:0032786
GO:GO:0006290 GO:GO:0007256 GO:GO:0000303 IPI:IPI00358023
Ensembl:ENSRNOT00000038493 ArrayExpress:D3ZZZ1 Uniprot:D3ZZZ1
Length = 1475
Score = 700 (251.5 bits), Expect = 5.8e-64, Sum P(3) = 5.8e-64
Identities = 174/530 (32%), Positives = 278/530 (52%)
Query: 556 KLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKK-KVNG------- 607
KL +YQ G+ W+ L GIL DEMGLGKTIQ IA + L K + G
Sbjct: 500 KLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEG 559
Query: 608 --PFLIIVPLSTLSNWSLEFERWAPSVNV-VAYK-GSPHLRKTLQAQMKASKFNVLLTTY 663
P LI+ P + + W EF W P V + ++ GS RK + VL+T+Y
Sbjct: 560 LGPTLIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSCAHRKERLVRDIVHCHGVLITSY 619
Query: 664 EYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPE 723
Y+ + +++ W Y+I+DEGH+++N + +T F PHR++L+G+P+QN L E
Sbjct: 620 SYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRT-PHRIILSGSPMQNNLRE 678
Query: 724 LWALLNFLLPSIFKSVSTFEQWFNAPFATTG----EKVELNEEETILIIRRLHKVLRPFL 779
LW+L +F P ++ F + F+ P G V++ + L + P+L
Sbjct: 679 LWSLFDFTFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV--LRDTINPYL 736
Query: 780 LRRLKKEVESQL--PDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXX 837
LRR+K +V+ L PDK E ++ C ++ Q +Y++ D S+
Sbjct: 737 LRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNF-------ID-SKAVYRILNGENQ 788
Query: 838 LMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLY-RVSGKFELLDRILPKLKS 896
+ + +V LRK+CNHP +F K + + G+ Y + SGK +++ +L
Sbjct: 789 IFSGLVALRKICNHPDLFSG-GPKNTSALPEDGLEEEQFGYWKRSGKMIVVESLLKIWHK 847
Query: 897 TGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVL 956
G RVLLF Q Q+++ILE + + Y+++DGTT R L+ K+N D+ F+F+L
Sbjct: 848 QGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYNE-DTSIFVFLL 906
Query: 957 STRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERI 1016
+TR GGLG+NL A+ VII+D DWNP D QA++RA RIGQK +V V RL+T ++EE+I
Sbjct: 907 TTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKI 966
Query: 1017 LAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAV 1066
+K + +V++ + ++ ++ L T+ D + E +A+
Sbjct: 967 YHRQIFKQFLTNRVLKDPKQRRFFKSNDLYE-LFTLTSPDASQGTETSAI 1015
Score = 42 (19.8 bits), Expect = 5.8e-64, Sum P(3) = 5.8e-64
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 265 TTLETAVNVKAYKRTKRQGLKEARATEK-LEKQQKVEAERKKR 306
T T K K+ ++ L EA EK L Q ++ +RKK+
Sbjct: 247 TPFGTPAPQKQEKKPRKIMLNEASGFEKYLADQAQLSFKRKKQ 289
Score = 37 (18.1 bits), Expect = 5.8e-64, Sum P(3) = 5.8e-64
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 57 LQRAIDSMKEQGLEEDPRYQKLIEMKANRTE 87
+ R +DS+K Q ++ + +K I K R +
Sbjct: 167 INRKLDSVKRQKYNKEQQLKK-ITAKQKRLQ 196
>UNIPROTKB|H0YMN5 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR020838 Pfam:PF00176 Pfam:PF13892 PROSITE:PS51413
GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AC020661 GO:GO:0016817 ChiTaRS:INO80
HGNC:HGNC:26956 EMBL:AC021753 ProteinModelPortal:H0YMN5 SMR:H0YMN5
Ensembl:ENST00000558357 Bgee:H0YMN5 Uniprot:H0YMN5
Length = 1104
Score = 672 (241.6 bits), Expect = 6.1e-64, Sum P(3) = 6.1e-64
Identities = 134/326 (41%), Positives = 205/326 (62%)
Query: 552 LVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLI 611
+ NGKLK YQ+KG+ W+ +L+ +NGILADEMGLGKT+Q+IAL+ +L E++ + GPFLI
Sbjct: 513 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLI 572
Query: 612 IVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQA--QMKA-----SKFNVLLTTYE 664
I P STL+NW EF R+ P V+ Y G+PH RK ++ K + F+V++T+Y+
Sbjct: 573 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQ 632
Query: 665 YVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPEL 724
V++D ++ W+YM++DE +K+ IL F +RLLLTGTP+QN + EL
Sbjct: 633 LVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCR-NRLLLTGTPIQNTMAEL 691
Query: 725 WALLNFLLPSIFKSVSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHKVLRPFLLRRL 783
WALL+F++P++F S F +WF+ + E K ++E + + RLH +L+PF+LRR+
Sbjct: 692 WALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHMILKPFMLRRI 747
Query: 784 KKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK-GI--LLTDGSEXXXXXXXXXXXLMN 840
KK+VE++L DK+E ++ C ++ QK+LY+ + K I LL LMN
Sbjct: 748 KKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMN 807
Query: 841 TIVQLRKLCNHPFMFQNIEEKFSDHV 866
++Q RK+CNHP +F+ E H+
Sbjct: 808 LVMQFRKVCNHPELFERQETWSPFHI 833
Score = 58 (25.5 bits), Expect = 6.1e-64, Sum P(3) = 6.1e-64
Identities = 28/120 (23%), Positives = 56/120 (46%)
Query: 203 LQERENRVALNI-ERRIEELNGSLTSTLPEHLRVKAEIELRALKVLN---FQRQLRA-EV 257
L R +V L+I ++ + + N S L ++ + +K + Q Q E
Sbjct: 273 LNARRRKVWLSIVKKELPKANKQKASARNLFLTNSRKLAHQCMKEVRRAALQAQKNCKET 332
Query: 258 IACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVL 317
+ ARR T E + K Y++ +++ K A E LE Q+K++ E ++ ++ Q + ++
Sbjct: 333 LPRARR-LTKEMLLYWKKYEKVEKEHRKRAEK-EALE-QRKLDEEMREAKRQQRKLNFLI 389
Score = 40 (19.1 bits), Expect = 4.7e-62, Sum P(3) = 4.7e-62
Identities = 8/29 (27%), Positives = 19/29 (65%)
Query: 283 GLKEARATEKLEKQQKVEAERKKRQKHQE 311
G K+ + E+ + + K++ +KKR++ +E
Sbjct: 206 GPKKKKFKEEKKLKAKLKKVKKKRRRDEE 234
Score = 39 (18.8 bits), Expect = 6.1e-64, Sum P(3) = 6.1e-64
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 381 QKKDKRLAFLLSQTDEY 397
+++ ++L FL++QT+ Y
Sbjct: 379 KRQQRKLNFLITQTELY 395
>ZFIN|ZDB-GENE-021125-1 [details] [associations]
symbol:smarca5 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 5"
species:7955 "Danio rerio" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 ZFIN:ZDB-GENE-021125-1 GO:GO:0005524
GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OMA:EDYCHWR HOVERGEN:HBG056329 EMBL:CU550733
IPI:IPI00619566 UniGene:Dr.76168 Ensembl:ENSDART00000123972
ArrayExpress:B8A552 Bgee:B8A552 Uniprot:B8A552
Length = 1035
Score = 659 (237.0 bits), Expect = 8.0e-64, Sum P(3) = 8.0e-64
Identities = 137/314 (43%), Positives = 193/314 (61%)
Query: 547 EQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVN 606
+ S + GKL++YQ++GL W++SL+ N +NGILADEMGLGKT+QTI+L+ Y+ + +
Sbjct: 153 DSPSYVKTGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 212
Query: 607 GPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEY 665
GP +++VP STL NW EF+RW PS+ V G R ++ + +++V +T+YE
Sbjct: 213 GPHMVLVPKSTLYNWMNEFKRWVPSLKAVCLIGDREERTAFIRDTLLPGEWDVCVTSYEM 272
Query: 666 VIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELW 725
+I ++ K +W+Y++IDE HR+KN KL+ I+ F +RLLLTGTPLQN L ELW
Sbjct: 273 LIIERAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTT-NRLLLTGTPLQNNLHELW 331
Query: 726 ALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 785
ALLNFLLP +F S F+ WF+ K ++ RLH VLRPFLLRR+K
Sbjct: 332 ALLNFLLPDVFNSSEDFDAWFDTNNCLGDTK----------LVERLHTVLRPFLLRRIKA 381
Query: 786 EVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQL 845
+VE L K E IK + GL K + R +TK IL+ D L+N ++QL
Sbjct: 382 DVEKSLLPKKE--IKIYV-GLSK-MQREWYTK-ILMKDIDILNSAGKMDKMRLLNVLMQL 436
Query: 846 RKLCNHPFMFQNIE 859
RK CNHP++F E
Sbjct: 437 RKCCNHPYLFDGAE 450
Score = 633 (227.9 bits), Expect = 3.2e-58, Sum P(3) = 3.2e-58
Identities = 147/319 (46%), Positives = 192/319 (60%)
Query: 767 IIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
++ RLH VLRPFLLRR+K +VE L K E IK + GL K + R +TK IL+ D
Sbjct: 363 LVERLHTVLRPFLLRRIKADVEKSLLPKKE--IKIYV-GLSK-MQREWYTK-ILMKDIDI 417
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRV--SGKF 884
L+N ++QLRK CNHP++F E G DL+ V SGK
Sbjct: 418 LNSAGKMDKMRLLNVLMQLRKCCNHPYLFDGAEP---------GPPYTTDLHLVVNSGKM 468
Query: 885 ELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKF 944
+LD++LPKLK G RVL+F QMT++++ILEDY +R + Y RLDG T E+R + F
Sbjct: 469 VVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAF 528
Query: 945 NAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVL 1004
N P+S F+F+LSTRAGGLG+NL TAD VII+DSDWNP DLQA DRAHRIGQK +VRV
Sbjct: 529 NEPNSSKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVF 588
Query: 1005 RLMTVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEE 1063
R +T N+VEERI+ A KL +D VIQ G + D + + L I H +
Sbjct: 589 RFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDPSMNKLGKDEMLSIIRHGATHVFASK 648
Query: 1064 NAVPDDETVNQMLARSEEE 1082
+ DE ++ +L R E +
Sbjct: 649 ESEITDEDIDGILERGERK 667
Score = 64 (27.6 bits), Expect = 8.0e-64, Sum P(3) = 8.0e-64
Identities = 42/182 (23%), Positives = 83/182 (45%)
Query: 980 WNPHQDLQAQDRAHRIGQKNEVRVLRLMTVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1038
W +LQ ++ ++ E R+ R +++ +++ +I RYK + I G
Sbjct: 870 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDSKI---GRYKAPFHQLRISYGTNKG 926
Query: 1039 KSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKE-Q 1097
K+ E +FL +LH+ + E +V D+ + Q + R+ +F+ + + E Q
Sbjct: 927 KNYTEEEDRFLICMLHKLGFDKE---SVYDE--LRQCI-RNSPQFRFDWFLKSRTAMELQ 980
Query: 1098 GKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKALHMGRGSRQRKQVDYTDSLTEKEW 1157
+ + LI + E +E+ E+E+ E E++K +++RKQ D K+
Sbjct: 981 RRCNTLITLIE------RENMELEER--EKAEKKKRGPRTSSAQKRKQDGTPDGRGRKKK 1032
Query: 1158 LK 1159
LK
Sbjct: 1033 LK 1034
Score = 42 (19.8 bits), Expect = 8.0e-64, Sum P(3) = 8.0e-64
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 374 GYRKLIDQKKDKRLAFLLSQTDEY 397
GY + + + R +LL QT+ +
Sbjct: 62 GYEEKVQTDRTNRFEYLLKQTEVF 85
Score = 41 (19.5 bits), Expect = 2.0e-61, Sum P(3) = 2.0e-61
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E + DI+KI+ +IE G+
Sbjct: 869 FWERCNELQDIEKIMAQIERGE 890
>FB|FBgn0011604 [details] [associations]
symbol:Iswi "Imitation SWI" species:7227 "Drosophila
melanogaster" [GO:0006338 "chromatin remodeling"
evidence=ISS;NAS;TAS] [GO:0016589 "NURF complex"
evidence=NAS;IDA;TAS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IGI;IDA] [GO:0000166 "nucleotide binding"
evidence=TAS] [GO:0016584 "nucleosome positioning" evidence=IDA]
[GO:0006334 "nucleosome assembly" evidence=IDA] [GO:0016590 "ACF
complex" evidence=NAS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0008623 "CHRAC"
evidence=NAS;IDA;TAS] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA;TAS] [GO:0042766 "nucleosome
mobilization" evidence=IDA;TAS] [GO:0016887 "ATPase activity"
evidence=NAS] [GO:0035060 "brahma complex" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006351 "transcription,
DNA-dependent" evidence=IDA] [GO:0005667 "transcription factor
complex" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035076 "ecdysone
receptor-mediated signaling pathway" evidence=IGI] [GO:0007517
"muscle organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0042752 "regulation of circadian
rhythm" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0031213 "RSF complex"
evidence=IPI] [GO:0005700 "polytene chromosome" evidence=IDA]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=IDA]
[GO:0035063 "nuclear speck organization" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 EMBL:AE013599 GO:GO:0005524
GO:GO:0045892 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0042752 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0048813 GO:GO:0007517 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0005700 GO:GO:0035076 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0016590 GO:GO:0008623 GO:GO:0008094
ChiTaRS:SMARCA1 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 EMBL:L27127 EMBL:AY094908 EMBL:BT044562 PIR:A56533
RefSeq:NP_523719.1 RefSeq:NP_725203.1 RefSeq:NP_725204.1
UniGene:Dm.2581 PDB:1OFC PDBsum:1OFC ProteinModelPortal:Q24368
SMR:Q24368 DIP:DIP-24067N IntAct:Q24368 MINT:MINT-252539
STRING:Q24368 PaxDb:Q24368 PRIDE:Q24368 EnsemblMetazoa:FBtr0087841
EnsemblMetazoa:FBtr0087842 EnsemblMetazoa:FBtr0087843 GeneID:36390
KEGG:dme:Dmel_CG8625 CTD:36390 FlyBase:FBgn0011604
InParanoid:Q24368 OMA:EDYCHWR OrthoDB:EOG4M0CGK PhylomeDB:Q24368
EvolutionaryTrace:Q24368 GenomeRNAi:36390 NextBio:798287
Bgee:Q24368 GermOnline:CG8625 GO:GO:0031213 GO:GO:0070615
GO:GO:0035063 Uniprot:Q24368
Length = 1027
Score = 673 (242.0 bits), Expect = 1.4e-63, Sum P(3) = 1.4e-63
Identities = 142/307 (46%), Positives = 192/307 (62%)
Query: 554 NGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIV 613
+G++++YQI+GL WM+SL+ N +NGILADEMGLGKT+QTI+L+ YL K GP ++IV
Sbjct: 125 SGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIV 184
Query: 614 PLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKT-LQAQMKASKFNVLLTTYEYVIKDKGP 672
P STL NW EF++W PS+ V G R T ++ + +++V +T+YE I++K
Sbjct: 185 PKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPGEWDVCVTSYEMCIREKSV 244
Query: 673 LAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKLPELWALLNFLL 732
K +W+Y++IDE HR+KN KL+ IL F A +RLL+TGTPLQN L ELWALLNFLL
Sbjct: 245 FKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTA-NRLLITGTPLQNNLHELWALLNFLL 303
Query: 733 PSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLP 792
P +F S F++WFN L ++ +I RLH VL+PFLLRRLK EVE +L
Sbjct: 304 PDVFNSSEDFDEWFNTNTC-------LGDDA---LITRLHAVLKPFLLRRLKAEVEKRLK 353
Query: 793 DKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHP 852
K E I GL K + R +TK +LL D L N ++QLRK NHP
Sbjct: 354 PKKEMKI---FVGLSK-MQRDWYTK-VLLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHP 408
Query: 853 FMFQNIE 859
++F E
Sbjct: 409 YLFDGAE 415
Score = 635 (228.6 bits), Expect = 7.9e-59, Sum P(3) = 7.9e-59
Identities = 143/315 (45%), Positives = 191/315 (60%)
Query: 767 IIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
+I RLH VL+PFLLRRLK EVE +L K E I GL K + R +TK +LL D
Sbjct: 328 LITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKI---FVGLSK-MQRDWYTK-VLLKDIDV 382
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFEL 886
L N ++QLRK NHP++F E G + L SGK +
Sbjct: 383 VNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEP-------GPPYTTDTHLVYNSGKMAI 435
Query: 887 LDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNA 946
LD++LPKL+ G RVL+F QMT++++ILEDY +R + Y RLDG T EDR +++FN
Sbjct: 436 LDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNM 495
Query: 947 PDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 1006
+S F+F+LSTRAGGLG+NL TAD VII+DSDWNP DLQA DRAHRIGQK +VRV RL
Sbjct: 496 DNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRL 555
Query: 1007 MTVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEENA 1065
+T ++VEE+I+ A KL +D+ VIQ G + D +S + + L I ++ +
Sbjct: 556 ITESTVEEKIVERAEVKLRLDKMVIQGGRLVDNRSNQLNKDEMLNIIRFGANQVFSSKET 615
Query: 1066 VPDDETVNQMLARSE 1080
DE ++ +L R E
Sbjct: 616 DITDEDIDVILERGE 630
Score = 44 (20.5 bits), Expect = 1.4e-63, Sum P(3) = 1.4e-63
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 370 EDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLT 402
E E + I+ + +R FLL QT+ + +T
Sbjct: 30 EKEAEFDNKIEADRSRRFDFLLKQTEIFTHFMT 62
Score = 42 (19.8 bits), Expect = 1.4e-63, Sum P(3) = 1.4e-63
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E DI++I+G+IE G+
Sbjct: 842 FWERCTELQDIERIMGQIERGE 863
Score = 39 (18.8 bits), Expect = 4.6e-63, Sum P(3) = 4.6e-63
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 268 ETAVNVKAYKRTKRQGLKEARATEKLEKQ----QKVEAERKKR 306
+TA V+A + + +A + EK+ K+EA+R +R
Sbjct: 5 DTAA-VEATEENSNETTSDAATSSSGEKEAEFDNKIEADRSRR 46
Score = 37 (18.1 bits), Expect = 4.6e-63, Sum P(3) = 4.6e-63
Identities = 12/57 (21%), Positives = 24/57 (42%)
Query: 1056 DDEEDEEENAVPDDET-VNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPD 1111
D+ + E P++ N + E Q +RI + + +GK R + + + D
Sbjct: 821 DNIAKDVEGKTPEEVIEYNAVFWERCTELQDIERIMGQIERGEGKIQRRLSIKKALD 877
>RGD|2323132 [details] [associations]
symbol:LOC100359912 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin a5-like" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:2323132 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00390811
Ensembl:ENSRNOT00000031851 Uniprot:F1M7H3
Length = 760
Score = 641 (230.7 bits), Expect = 1.7e-63, Sum P(2) = 1.7e-63
Identities = 141/317 (44%), Positives = 191/317 (60%)
Query: 767 IIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q R +T+ IL+ D
Sbjct: 101 LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQ----REWYTR-ILMKDIDI 155
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGKFEL 886
L+N ++QLRK CNHP++F E G + L SGK +
Sbjct: 156 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP-------GPPYTTDMHLVTNSGKMVV 208
Query: 887 LDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLLKKFNA 946
LD++LPKLK G RVL+F QMT++++ILEDY +R ++Y RLDG T ++R D + +N
Sbjct: 209 LDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNE 268
Query: 947 PDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 1006
P+S F+F+LSTRAGGLG+NL TAD VI++DSDWNP DLQA DRAHRIGQ VRV R
Sbjct: 269 PNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRF 328
Query: 1007 MTVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHQFLQTILHQDDEEDEEENA 1065
+T N+VEERI+ A KL +D VIQ G + DQ + + LQ I H + +
Sbjct: 329 ITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVFASKES 388
Query: 1066 VPDDETVNQMLARSEEE 1082
DE ++ +L R ++
Sbjct: 389 EITDEDIDGILERGAKK 405
Score = 410 (149.4 bits), Expect = 6.7e-36, Sum P(2) = 6.7e-36
Identities = 89/204 (43%), Positives = 122/204 (59%)
Query: 656 FNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGT 715
++V +T+YE +IK+K K +W+Y++IDE HR+KN KL+ I+ F +RLLLTGT
Sbjct: 1 WDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTT-NRLLLTGT 59
Query: 716 PLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVL 775
PLQN L ELW+LLNFLLP +F S F+ WF+ G+K ++ RLH VL
Sbjct: 60 PLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCL-GDKK---------LVERLHMVL 109
Query: 776 RPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXX 835
RPFLLRR+K +VE LP K E I +S +Q R +T+ IL+ D
Sbjct: 110 RPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQ----REWYTR-ILMKDIDILNSAGKMDK 164
Query: 836 XXLMNTIVQLRKLCNHPFMFQNIE 859
L+N ++QLRK CNHP++F E
Sbjct: 165 MRLLNILMQLRKCCNHPYLFDGAE 188
Score = 60 (26.2 bits), Expect = 6.7e-36, Sum P(2) = 6.7e-36
Identities = 35/158 (22%), Positives = 73/158 (46%)
Query: 968 QTADTVIIFDSD-WNPHQDLQAQDRAHRIGQKNEVRVLRLMTVN-SVEERILAAARYKLN 1025
+T + VI + + W +LQ ++ ++ E R+ R +++ +++ +I RYK
Sbjct: 596 KTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKI---GRYKAP 652
Query: 1026 MDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEE-EFQ 1084
+ I G K+ E ++FL +LH+ + +EN DE + Q + S + F
Sbjct: 653 FHQLRISYGTNKGKNYTEEENRFLICMLHKLGFD--KENVY--DE-LRQCIRNSPQFRFD 707
Query: 1085 TYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQ 1122
+ + Q + + LI + E + ++E E+ E+
Sbjct: 708 WFLK-SRTAMALQRRCNTLITLIERENMELEEKEKAEK 744
Score = 41 (19.5 bits), Expect = 1.7e-63, Sum P(2) = 1.7e-63
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1256 YYEVIDRPMDIKKILGRIEDGK 1277
++E + DI+KI+ +IE G+
Sbjct: 608 FWERCNELQDIEKIMAQIERGE 629
Score = 37 (18.1 bits), Expect = 4.6e-63, Sum P(2) = 4.6e-63
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 1120 IEQWAFEAKEEEKALHMGRGSRQRKQ 1145
IE+ E +E+EKA RG + Q
Sbjct: 729 IERENMELEEKEKAEKKKRGPKPSTQ 754
>DICTYBASE|DDB_G0286219 [details] [associations]
symbol:DDB_G0286219 "putative TBP-associated factor"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR016024
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0286219 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 InterPro:IPR021133
PROSITE:PS50077 GO:GO:0003677 EMBL:AAFI02000085 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K15192 OMA:TKQEGAI InterPro:IPR022707 Pfam:PF12054
RefSeq:XP_637789.1 ProteinModelPortal:Q54M42 STRING:Q54M42
PRIDE:Q54M42 EnsemblProtists:DDB0233434 GeneID:8625503
KEGG:ddi:DDB_G0286219 InParanoid:Q54M42 ProtClustDB:CLSZ2430112
Uniprot:Q54M42
Length = 2005
Score = 420 (152.9 bits), Expect = 4.0e-63, Sum P(3) = 4.0e-63
Identities = 98/276 (35%), Positives = 159/276 (57%)
Query: 551 ILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVN---- 606
I +N +L++YQ G+ W+ L L+GIL D+MGLGKT+QTI +I ++VN
Sbjct: 1371 IRINTELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQTICIIAGDDYHRRVNYQEK 1430
Query: 607 G-------PFLIIVPLSTLSNWSLEFERWAP--SVNVVAYKGSPHLRKTLQAQMKASKFN 657
G P L+I P S + +W E +++ ++ + Y G+P R+ +++ K N
Sbjct: 1431 GTPDFAPLPSLVICPPSLVGHWFYEIKKFCSDSTMKPMTYMGNPSERQAQRSKFK--DHN 1488
Query: 658 VLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPL 717
VL+ +Y+ + D L+++H+ Y I+DEGH +KN KLT + HRL+L+GTP+
Sbjct: 1489 VLIMSYDIMRNDIDILSEMHFNYCILDEGHIIKNAKTKLTQAAKRLQ-SNHRLILSGTPI 1547
Query: 718 QNKLPELWALLNFLLPSIFKSVSTFEQWFNAPF-ATTGEKVELNEEET-ILIIRRLHKVL 775
QN + ELW+L +FL+P + F + ++ P A+ K ++E +L + LH+ +
Sbjct: 1548 QNNVLELWSLFDFLMPGFLGTEKLFNELYSKPILASKDPKCSTKDQEAGVLAMEALHRQV 1607
Query: 776 RPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLY 811
PFLLRRLK++V + LP K+ C++S LQ LY
Sbjct: 1608 LPFLLRRLKEDVLADLPPKIIQDRYCNLSPLQIRLY 1643
Score = 312 (114.9 bits), Expect = 4.0e-63, Sum P(3) = 4.0e-63
Identities = 69/176 (39%), Positives = 106/176 (60%)
Query: 895 KSTG-HRVLLFCQMTQLMNILE-DYFSYR--GFKYMRLDGTTKAEDRGDLLKKFNAPDSE 950
+ST HRVL+F QM +++I+E + F Y+R+DG+ + R ++ +FN+ D
Sbjct: 1775 ESTNQHRVLIFAQMKSMLDIVENELFKKHLPSVTYLRMDGSVETMKRHSIVNQFNS-DPT 1833
Query: 951 YFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVN 1010
+ +L+T GGLGLNL ADTVI + DWNP +DLQA DRAHRIGQK V V RL+T
Sbjct: 1834 IDVLLLTTHVGGLGLNLTGADTVIFLEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITSG 1893
Query: 1011 SVEERILAAARYKLNMDEKVIQAGMFDQKSTGS-ERHQFLQTILHQDDEEDEEENA 1065
++EE+I+ ++KLN+ VI D S + ++ L + DD++ ++ +
Sbjct: 1894 TLEEKIMGLQKFKLNIANTVIN---HDNSSLQTMSTNELLNLFDYSDDQKSQQSKS 1946
Score = 101 (40.6 bits), Expect = 2.2e-28, Sum P(4) = 2.2e-28
Identities = 34/116 (29%), Positives = 50/116 (43%)
Query: 760 NEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGI 819
++E +L + LH+ + PFLLRRLK++V + LP K+ C++S LQ LY +
Sbjct: 1592 DQEAGVLAMEALHRQVLPFLLRRLKEDVLADLPPKIIQDRYCNLSPLQIRLYDYFSRTQF 1651
Query: 820 LLT-------------DGSEXXXXXXXX---XXXLMNTIVQLRKLCNHPFMFQNIE 859
T +G E + + LRKLC HP N E
Sbjct: 1652 KETIKNEVEDENEDADEGGESKKKKGGNGGGATHIFQALQYLRKLCGHPSFVLNPE 1707
Score = 66 (28.3 bits), Expect = 4.0e-63, Sum P(3) = 4.0e-63
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 191 IPKPEGLDPLIILQERENRVALNIERRIEELNGSLTSTLPEHLRVKAEI 239
+P PEGLD +I Q++E R L + L+GS P +R+ E+
Sbjct: 1334 VPDPEGLDQDLIQQKQEERKFLE-----QLLDGSKVENYPLPIRINTEL 1377
Score = 50 (22.7 bits), Expect = 1.9e-61, Sum P(3) = 1.9e-61
Identities = 14/53 (26%), Positives = 29/53 (54%)
Query: 265 TTLETAVN---VKAYK-RTKRQGLKEARATEKLEKQQKVEAERKKRQKHQEYI 313
T L T N +K Y+ ++Q ++ ++L+ QQ+ + +++QK Q+ I
Sbjct: 1131 TLLSTITNDTMMKLYQIHLQQQQQQQQNNQQQLQLQQQQQQNNQQQQKEQQII 1183
Score = 43 (20.2 bits), Expect = 4.7e-35, Sum P(3) = 4.7e-35
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 904 FCQMTQLMNILEDYFSYRGFK 924
+C ++ L L DYFS FK
Sbjct: 1632 YCNLSPLQIRLYDYFSRTQFK 1652
Score = 41 (19.5 bits), Expect = 1.5e-59, Sum P(4) = 1.5e-59
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 441 DQDETSQLTDMHISVREISSGKVLKGE--DAPLAAHLKQW 478
+ + T++ T HI+ + SGK++ D A + +W
Sbjct: 293 NNNSTTEKTKQHITEQPQDSGKIVMESILDVDKAYNQDEW 332
Score = 41 (19.5 bits), Expect = 7.5e-35, Sum P(3) = 7.5e-35
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 1012 VEERILAAARYKLNMDE----KVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENA 1065
++E +LA K+ D +Q ++D S R QF +TI +++ EDE E+A
Sbjct: 1615 LKEDVLADLPPKIIQDRYCNLSPLQIRLYDYFS----RTQFKETI--KNEVEDENEDA 1666
Score = 40 (19.1 bits), Expect = 1.5e-59, Sum P(4) = 1.5e-59
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 532 ATYYS--IAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNL 576
A Y S I V E T+ I+V E +K ++ ++ L NN L
Sbjct: 407 ADYTSDQIVAPVRETCTQTLGIVVKYMDNESVLKVIDILLHLQNNKL 453
Score = 40 (19.1 bits), Expect = 7.8e-20, Sum P(4) = 7.8e-20
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 878 YRVSGKFELLDRILPKLKST 897
Y V+ + +L+D ILP++ T
Sbjct: 466 YVVAVRLDLIDIILPRILPT 485
Score = 38 (18.4 bits), Expect = 2.2e-28, Sum P(4) = 2.2e-28
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 448 LTDMHISVREISSGKVLKGEDAPLAAHLKQWIQDH 482
L++MH + + G ++K L K+ +H
Sbjct: 1504 LSEMHFNYCILDEGHIIKNAKTKLTQAAKRLQSNH 1538
Score = 37 (18.1 bits), Expect = 3.1e-25, Sum P(5) = 3.1e-25
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 711 LLTGTPLQNKLPELWALLNFLLPSIFKSV 739
L+ TP +K L ++L L+ IF+++
Sbjct: 627 LIVSTPQDSKTHWLLSILPDLMRYIFQNI 655
>MGI|MGI:1276124 [details] [associations]
symbol:Ep400 "E1A binding protein p400" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0035267 "NuA4 histone acetyltransferase complex"
evidence=ISO] [GO:0043967 "histone H4 acetylation" evidence=ISO]
[GO:0043968 "histone H2A acetylation" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1276124 GO:GO:0005524 GO:GO:0003677
GO:GO:0016607 GO:GO:0003682 GO:GO:0035267 GO:GO:0043968
GO:GO:0043967 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 KO:K11320 CTD:57634 HOVERGEN:HBG051488
OMA:MQKQKLQ OrthoDB:EOG4RBQHQ ChiTaRS:EP400 EMBL:AB092694
EMBL:AB092695 EMBL:AC161348 EMBL:AK006168 EMBL:AK030095
EMBL:AK037693 EMBL:AK046892 EMBL:AK163566 EMBL:AK164049
EMBL:AK122517 EMBL:BC022153 EMBL:BC085511 IPI:IPI00229659
IPI:IPI00404291 IPI:IPI00480329 IPI:IPI00720144 IPI:IPI01008391
RefSeq:NP_083613.2 RefSeq:NP_775089.1 UniGene:Mm.270487
ProteinModelPortal:Q8CHI8 IntAct:Q8CHI8 STRING:Q8CHI8
PhosphoSite:Q8CHI8 PaxDb:Q8CHI8 PRIDE:Q8CHI8
Ensembl:ENSMUST00000041558 Ensembl:ENSMUST00000112435
Ensembl:ENSMUST00000112436 GeneID:75560 KEGG:mmu:75560
UCSC:uc008yrf.1 UCSC:uc008yrg.1 UCSC:uc008yrh.1 InParanoid:Q8CHI8
Bgee:Q8CHI8 CleanEx:MM_EP400 Genevestigator:Q8CHI8
GermOnline:ENSMUSG00000029505 Uniprot:Q8CHI8
Length = 3072
Score = 475 (172.3 bits), Expect = 6.6e-63, Sum P(5) = 6.6e-63
Identities = 121/401 (30%), Positives = 201/401 (50%)
Query: 528 AMEEATYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLG 587
A+ EA + V V A L+ G L++YQ GL+W+ L+ NLNGILADE GLG
Sbjct: 1061 AVAEAILPKGSARVTTAVKFSAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLG 1120
Query: 588 KTIQTIALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPH-LRKT 646
KT+Q IA +L + GP L+++ + W LE +RW P + ++Y GS L+
Sbjct: 1121 KTVQIIAFFAHLACNEGNWGPHLVVMRSCNILKWELELKRWCPGLKTLSYVGSHRELKAK 1180
Query: 647 LQAQMKASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYV- 705
Q + + F++ +T+Y+ + +++HWK +++DE R+K + H F +
Sbjct: 1181 RQEWTEPNNFHICITSYKQFFRGYTAFSRVHWKCLVVDEMQRVKGMTER--HWEAIFKLQ 1238
Query: 706 APHRLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETI 765
+ RLLL PL N ELW +++FL+P I + +F P E+ N++
Sbjct: 1239 SQQRLLLIDVPLHNTFLELWTMVHFLIPGISRPYLSF------PLKAPNEE---NQDYYH 1289
Query: 766 LIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGS 825
++ RLH+V +PF+LRR K++VE QL K E+++KC +S QK LY + ++L +
Sbjct: 1290 KMVIRLHRVTQPFILRRTKRDVEKQLTRKYEHVLKCRLSSRQKALY-----EDVILQPRT 1344
Query: 826 EXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVSGK-- 883
+ L + + +L+++CNHP + + S G S + RV +
Sbjct: 1345 QEALKSGHFVSVL-SVLTRLQRICNHPGLVEPRVPGSSFAAGSLQYKSASLILRVLEREF 1403
Query: 884 -----FELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFS 919
+ D I + K T H L C+ ++E+ F+
Sbjct: 1404 WKETDLSIFDLIGLENKITRHEAELLCKKKVTRKLMEEVFA 1444
Score = 278 (102.9 bits), Expect = 6.6e-63, Sum P(5) = 6.6e-63
Identities = 56/137 (40%), Positives = 87/137 (63%)
Query: 881 SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL 940
SGK E L +L KLKS G RVL+ QM +++ILE + ++ Y+R+D +E R +L
Sbjct: 1813 SGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYVRIDENANSEQRQEL 1872
Query: 941 LKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 1000
++ FN D F +LST + G+NL ADTV+ +D+D NP D +AQ+ RIG+ +
Sbjct: 1873 MRSFNR-DRRIFCALLSTHSRATGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1931
Query: 1001 VRVLRLMTVNSVEERIL 1017
+ + RL++ NS+EE++L
Sbjct: 1932 IHIYRLVSGNSIEEKLL 1948
Score = 63 (27.2 bits), Expect = 6.6e-63, Sum P(5) = 6.6e-63
Identities = 25/111 (22%), Positives = 47/111 (42%)
Query: 204 QERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQR-QLRAEVIACAR 262
Q R R+A R IE ++ + ++++ E+E + K LN Q+ R +
Sbjct: 862 QSRLRRIAATTAREIEYFWSNIEQVV--EIKLQVELEEKRKKALNLQKVSRRGKESRLKG 919
Query: 263 RDTTLETAVN--VKAYKRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQE 311
DT+ E +++ + KR L + ++ E ++ EA H E
Sbjct: 920 FDTSPEHSLDLGISGRKRKASTSLTDDEVEDEEETIEEEEAHEGLVDHHTE 970
Score = 43 (20.2 bits), Expect = 6.6e-63, Sum P(5) = 6.6e-63
Identities = 19/79 (24%), Positives = 33/79 (41%)
Query: 1014 ERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQDDEEDEEENA-VPDDETV 1072
E++ +Y LN E +F +T E+ + + ++ ++ E NA +
Sbjct: 2073 EQLTPIEKYALNYLE------LF-HTTTEQEKERISEDLVMASMKDWETRNARALQEREA 2125
Query: 1073 NQMLARSEEEFQTYQRIDA 1091
L + E E TY R DA
Sbjct: 2126 RLQLEQEEAELLTYTREDA 2144
Score = 41 (19.5 bits), Expect = 6.6e-63, Sum P(5) = 6.6e-63
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 1110 PDWLIKED 1117
PDWLI ED
Sbjct: 2282 PDWLIGED 2289
Score = 37 (18.1 bits), Expect = 2.0e-15, Sum P(4) = 2.0e-15
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 670 KGPLAKLHWKYMI 682
+ P K HW Y++
Sbjct: 803 EAPRPKSHWDYLL 815
>UNIPROTKB|G4NCV5 [details] [associations]
symbol:MGG_01012 "ISWI chromatin-remodeling complex ATPase
ISW2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CM001235 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
SUPFAM:SSF101224 RefSeq:XP_003717932.1 EnsemblFungi:MGG_01012T0
GeneID:2674262 KEGG:mgr:MGG_01012 Uniprot:G4NCV5
Length = 1128
Score = 676 (243.0 bits), Expect = 7.6e-63, Sum P(2) = 7.6e-63
Identities = 135/318 (42%), Positives = 198/318 (62%)
Query: 543 EIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEK 602
E V ++ + G +++YQI GL W++SL N ++GILADEMGLGKT+QTI+ + YL
Sbjct: 172 ETVFRESPAFIQGTMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYLRHI 231
Query: 603 KKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASK-FNVLLT 661
+ GP L+IVP STL NW EF +W P VNV+ +G+ R L A+ + F+V +T
Sbjct: 232 MGITGPHLVIVPKSTLDNWKREFGKWTPEVNVLVLQGAKEERAALIAERLVDESFDVCIT 291
Query: 662 TYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPLQNKL 721
+YE ++++K L K W+Y+IIDE HR+KN L ++ F + +RLL+TGTPLQN +
Sbjct: 292 SYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQVIRLFN-SRNRLLITGTPLQNNI 350
Query: 722 PELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 781
ELWALLNFLLP +F F+QWF+ GE + +T+ +++LH+VLRPFLLR
Sbjct: 351 HELWALLNFLLPDVFGDSEAFDQWFS------GEG---QDSDTV--VQQLHRVLRPFLLR 399
Query: 782 RLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXXLMNT 841
R+K +VE L K E + M+ +Q+ Y+ + K I +G+ L+N
Sbjct: 400 RVKADVEKSLLPKKEVNLYLKMTEMQRTWYQKILEKDIDAVNGANGKRESKTR---LLNI 456
Query: 842 IVQLRKLCNHPFMFQNIE 859
++QLRK CNHP++F+ E
Sbjct: 457 VMQLRKCCNHPYLFEGAE 474
Score = 613 (220.8 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 146/388 (37%), Positives = 221/388 (56%)
Query: 762 EETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILL 821
+++ ++++LH+VLRPFLLRR+K +VE L K E + M+ +Q+ Y+ + K I
Sbjct: 380 QDSDTVVQQLHRVLRPFLLRRVKADVEKSLLPKKEVNLYLKMTEMQRTWYQKILEKDIDA 439
Query: 822 TDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGPDLYRVS 881
+G+ L+N ++QLRK CNHP++F+ E G + L S
Sbjct: 440 VNGANGKRESKTR---LLNIVMQLRKCCNHPYLFEGAEP-------GPPYTTDEHLVYNS 489
Query: 882 GKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDLL 941
GK +LD++L +LK+ G RVL+F QM+++++ILEDY +R +KY R+DG T EDR +
Sbjct: 490 GKMVVLDKLLKRLKAQGSRVLIFSQMSRVLDILEDYCVFREYKYSRIDGGTAHEDRIAAI 549
Query: 942 KKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 1001
++N P SE F+F+L+TRAGGLG+NL TAD VI+FDSDWNP DLQA DRAHRIGQ +V
Sbjct: 550 DEYNKPGSEKFVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRAHRIGQTKQV 609
Query: 1002 RVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKS-TGSERHQFLQTILH------ 1054
V R + N++EE++L A KL++D VIQ G + + + + L I H
Sbjct: 610 YVYRFLVDNTIEEKVLERAAQKLHLDRLVIQQGRAQVAAKAAANKDELLSMIQHGAAKVF 669
Query: 1055 -QDDEEDEEENA--VPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPD 1111
+D + D ++A + DD+ + MLA E +T + ++A K + D
Sbjct: 670 NKDSDGDVVKSADDIQDDD-IEAMLASGES--RT-RELNARYEKLGIDDLQKFSSESAYD 725
Query: 1112 W------LIKEDEEI-EQWAFEAKEEEK 1132
W L+ + ++I W AK E K
Sbjct: 726 WNGENFALVNKSKDIGANWINPAKRERK 753
Score = 42 (19.8 bits), Expect = 7.6e-63, Sum P(2) = 7.6e-63
Identities = 15/83 (18%), Positives = 38/83 (45%)
Query: 1074 QMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSELPDWLIKEDEEIEQWAFEAKEEEKA 1133
+++ ++ E + Y ++ +R E + I+ E +E++ + + K K
Sbjct: 894 EVVGKTAAEIKAYSKVFWQRYTEIADYHKYIKTIE------DGEEKLRKIEHQRKMLRKK 947
Query: 1134 LHMGRGSRQRKQVDYTDSLTEKE 1156
+ R Q+ +++Y+ S T K+
Sbjct: 948 MSQYRVPLQQLKINYSVSTTNKK 970
Score = 40 (19.1 bits), Expect = 1.2e-62, Sum P(2) = 1.2e-62
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 1060 DEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKK 1100
D E D + ++ +EEE Q Q + E E ++
Sbjct: 831 DREAEQALDQQEIDNATPLTEEEQQRKQELSEEGFSEWNRR 871
>UNIPROTKB|G3N326 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 Pfam:PF00176
GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 EMBL:DAAA02057908
Ensembl:ENSBTAT00000063921 Uniprot:G3N326
Length = 934
Score = 659 (237.0 bits), Expect = 1.0e-62, Sum P(2) = 1.0e-62
Identities = 138/322 (42%), Positives = 206/322 (63%)
Query: 535 YSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIA 594
Y++A T ++ T +L+ G+L+EYQ GL+W+V+++ LNGILADEMGLGKTIQTI+
Sbjct: 589 YTLATT--QVKTP-IPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 645
Query: 595 LITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTL-QAQMKA 653
L+ +L +K GP LIIVP S + NW +E +RW PS ++ Y G+ RK Q K
Sbjct: 646 LLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKP 705
Query: 654 SKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLT 713
+ F+V +T+Y+ V++D + +W+Y+I+DE +KN + L F + RLLLT
Sbjct: 706 NAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFN-SQRRLLLT 764
Query: 714 GTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHK 773
GTPLQN L ELW+L++FL+P +F+S F++WF+ P TG +E ++E +++RLHK
Sbjct: 765 GTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPL--TG-MIEGSQEYNEGLVKRLHK 821
Query: 774 VLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXX 833
VLRPFLLRR+K +VE Q+P K E++I+C +S Q+ LY + T E
Sbjct: 822 VLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQ----TTTKETLATGHF 877
Query: 834 XXXXLMNTIVQLRKLCNHPFMF 855
++N ++QLRK+CNHP +F
Sbjct: 878 MS--VINILMQLRKVCNHPNLF 897
Score = 45 (20.9 bits), Expect = 1.0e-62, Sum P(2) = 1.0e-62
Identities = 18/96 (18%), Positives = 42/96 (43%)
Query: 219 EELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKR 278
EE+ L++ + R K + + ++++ + + + ARR+ + A +
Sbjct: 124 EEMQW-LSADFAQERRWKRGVARKVVRMVIRHHEEQRQKEERARREEQAKLRRIASAMAK 182
Query: 279 TKRQGLKEARATEKLEKQQKVEAERKKR-QKHQEYI 313
RQ + ++Q ++E +RKK H ++I
Sbjct: 183 DVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFI 218
Score = 43 (20.2 bits), Expect = 1.7e-62, Sum P(2) = 1.7e-62
Identities = 12/57 (21%), Positives = 28/57 (49%)
Query: 275 AYKRTKRQGL--KEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRN 329
A +R ++G+ K R + ++Q+ + ER +R++ + KD +++ N
Sbjct: 134 AQERRWKRGVARKVVRMVIRHHEEQRQKEERARREEQAKLRRIASAMAKDVRQFWSN 190
Score = 37 (18.1 bits), Expect = 7.2e-62, Sum P(2) = 7.2e-62
Identities = 22/97 (22%), Positives = 37/97 (38%)
Query: 302 ERK-KRQKHQEYITTVLQHCKDFKEYHRNNQARIMRLNKAVMNYHANAXXXXXXXXXXXX 360
ER+ KR ++ + V++H E R + R R +A + A+A
Sbjct: 136 ERRWKRGVARKVVRMVIRH----HEEQRQKEERARREEQAKLRRIASAMAKDVRQFWSNV 191
Query: 361 XXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEY 397
E RK + D L F++ QT++Y
Sbjct: 192 EKVVQFKQQSRLEEKRK---KALDLHLDFIVGQTEKY 225
>MGI|MGI:2444036 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
Pfam:PF00176 MGI:MGI:2444036 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AC136146 EMBL:AC122417 IPI:IPI00988884
ProteinModelPortal:E9Q9V7 SMR:E9Q9V7 Ensembl:ENSMUST00000066582
OMA:VIQDHQA Bgee:E9Q9V7 Uniprot:E9Q9V7
Length = 936
Score = 659 (237.0 bits), Expect = 1.9e-62, Sum P(2) = 1.9e-62
Identities = 138/322 (42%), Positives = 206/322 (63%)
Query: 535 YSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIA 594
Y++A T ++ T +L+ G+L+EYQ GL+W+V+++ LNGILADEMGLGKTIQTI+
Sbjct: 591 YTLATT--QVKTP-IPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 647
Query: 595 LITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTL-QAQMKA 653
L+ +L +K GP LIIVP S + NW +E +RW PS ++ Y G+ RK Q K
Sbjct: 648 LLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKP 707
Query: 654 SKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLT 713
+ F+V +T+Y+ V++D + +W+Y+I+DE +KN + L F + RLLLT
Sbjct: 708 NAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFN-SQRRLLLT 766
Query: 714 GTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHK 773
GTPLQN L ELW+L++FL+P +F+S F++WF+ P TG +E ++E +++RLHK
Sbjct: 767 GTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPL--TG-MIEGSQEYNEGLVKRLHK 823
Query: 774 VLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXX 833
VLRPFLLRR+K +VE Q+P K E++I+C +S Q+ LY + T E
Sbjct: 824 VLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQ----TTTKETLATGHF 879
Query: 834 XXXXLMNTIVQLRKLCNHPFMF 855
++N ++QLRK+CNHP +F
Sbjct: 880 MS--VINILMQLRKVCNHPNLF 899
Score = 43 (20.2 bits), Expect = 1.9e-62, Sum P(2) = 1.9e-62
Identities = 12/57 (21%), Positives = 28/57 (49%)
Query: 275 AYKRTKRQGL--KEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRN 329
A +R ++G+ K R + ++Q+ + ER +R++ + KD +++ N
Sbjct: 133 AQERRWKRGVARKVVRMVIRHHEEQRQKEERARREEQAKLRRIASTMAKDVRQFWSN 189
Score = 41 (19.5 bits), Expect = 3.0e-62, Sum P(2) = 3.0e-62
Identities = 17/96 (17%), Positives = 41/96 (42%)
Query: 219 EELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLRAEVIACARRDTTLETAVNVKAYKR 278
EE+ L++ + R K + + ++++ + + + ARR+ + +
Sbjct: 123 EEMQW-LSADFAQERRWKRGVARKVVRMVIRHHEEQRQKEERARREEQAKLRRIASTMAK 181
Query: 279 TKRQGLKEARATEKLEKQQKVEAERKKR-QKHQEYI 313
RQ + ++Q ++E +RKK H ++I
Sbjct: 182 DVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFI 217
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 513 (185.6 bits), Expect = 4.2e-62, Sum P(3) = 4.2e-62
Identities = 104/243 (42%), Positives = 154/243 (63%)
Query: 755 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHM 814
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+ +
Sbjct: 881 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFI 937
Query: 815 HTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSG 874
T+ + L+N ++ L+K CNHP++F + V +G G
Sbjct: 938 LTRNFEALNSK-----GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP--VLPNGSYDG 990
Query: 875 PDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKA 934
L + SGK LL ++L KL+ GHRVL+F QMT+++++LED+ Y G+KY R+DG
Sbjct: 991 SSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITG 1050
Query: 935 EDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHR 994
R + + +FNAP ++ F F+LSTRAGGLG+NL TADTVII+DSDWNPH D+QA RAHR
Sbjct: 1051 GLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHR 1110
Query: 995 IGQ 997
IGQ
Sbjct: 1111 IGQ 1113
Score = 299 (110.3 bits), Expect = 1.7e-38, Sum P(3) = 1.7e-38
Identities = 63/163 (38%), Positives = 102/163 (62%)
Query: 655 KFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTG 714
KF+VLLT+YE + D+ L + W +++DE HR+KN+ K +LN++ + ++LLLTG
Sbjct: 792 KFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKI-DYKLLLTG 850
Query: 715 TPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 774
TPLQN L EL+ LLNFL P F ++ F + F ++++E+ I ++LH +
Sbjct: 851 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 897
Query: 775 LRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK 817
L P +LRRLK +V +P K E I++ ++S +QK Y+ + T+
Sbjct: 898 LGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR 940
Score = 219 (82.2 bits), Expect = 4.2e-62, Sum P(3) = 4.2e-62
Identities = 42/94 (44%), Positives = 56/94 (59%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKT+QTI + L ++ GP+L+ P
Sbjct: 672 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAP 731
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ 648
LST+ NW EFE WAP VV Y G R ++
Sbjct: 732 LSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 765
Score = 40 (19.1 bits), Expect = 4.2e-62, Sum P(3) = 4.2e-62
Identities = 8/25 (32%), Positives = 18/25 (72%)
Query: 283 GLKEARATEKLEKQQKVEAERKKRQ 307
GL + + ++KL K+ + + +RKK++
Sbjct: 20 GLPKKKKSKKL-KENRSKGKRKKKE 43
Score = 37 (18.1 bits), Expect = 8.7e-62, Sum P(3) = 8.7e-62
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 277 KRTKRQGLKEARATEKLEKQQKVEAERKKRQKHQE 311
K+ K + LKE R+ K +K++ E + + E
Sbjct: 23 KKKKSKKLKENRSKGKRKKKEGSNDELSENEDDLE 57
Score = 37 (18.1 bits), Expect = 8.7e-62, Sum P(3) = 8.7e-62
Identities = 9/47 (19%), Positives = 23/47 (48%)
Query: 256 EVIACARRDTTLETAVNVKAYKRTKRQGLKEARATEKLEKQQKVEAE 302
E + ++ + + N KR K++G + + + + ++K E+E
Sbjct: 17 EPVGLPKKKKSKKLKENRSKGKRKKKEGSNDELSENEDDLEEKSESE 63
>UNIPROTKB|Q96L91 [details] [associations]
symbol:EP400 "E1A-binding protein p400" species:9606 "Homo
sapiens" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0035267
"NuA4 histone acetyltransferase complex" evidence=IDA] [GO:0043968
"histone H2A acetylation" evidence=IDA] [GO:0043967 "histone H4
acetylation" evidence=IDA] [GO:0016607 "nuclear speck"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00717 GO:GO:0005524
GO:GO:0003677 GO:GO:0016607 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR017877 PROSITE:PS50090 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 KO:K11320 EMBL:AY044869 EMBL:AC137590 EMBL:AC137632
EMBL:AB040931 EMBL:AK096311 EMBL:BC037208 EMBL:BC064554
EMBL:AB058721 EMBL:U80743 IPI:IPI00064931 IPI:IPI00167535
IPI:IPI00783692 IPI:IPI00798339 IPI:IPI00878154 RefSeq:NP_056224.3
UniGene:Hs.595201 ProteinModelPortal:Q96L91 DIP:DIP-29915N
IntAct:Q96L91 MINT:MINT-1897496 STRING:Q96L91 PhosphoSite:Q96L91
DMDM:209572748 PaxDb:Q96L91 PRIDE:Q96L91 DNASU:57634
Ensembl:ENST00000330386 Ensembl:ENST00000332482
Ensembl:ENST00000333577 Ensembl:ENST00000389561
Ensembl:ENST00000389562 Ensembl:ENST00000537902
Ensembl:ENST00000541296 GeneID:57634 KEGG:hsa:57634 UCSC:uc001ujm.3
UCSC:uc001ujn.3 UCSC:uc021rgq.1 CTD:57634 GeneCards:GC12P132434
H-InvDB:HIX0021564 HGNC:HGNC:11958 HPA:HPA016704 MIM:606265
neXtProt:NX_Q96L91 PharmGKB:PA27808 HOVERGEN:HBG051488
InParanoid:Q96L91 OMA:MQKQKLQ OrthoDB:EOG4RBQHQ ChiTaRS:EP400
GenomeRNAi:57634 NextBio:64345 ArrayExpress:Q96L91 Bgee:Q96L91
CleanEx:HS_EP400 Genevestigator:Q96L91 GermOnline:ENSG00000183495
Uniprot:Q96L91
Length = 3159
Score = 473 (171.6 bits), Expect = 4.7e-62, Sum P(4) = 4.7e-62
Identities = 111/342 (32%), Positives = 183/342 (53%)
Query: 528 AMEEATYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLG 587
A+ EA + V V A L+ G L++YQ GL+W+ L+ NLNGILADE GLG
Sbjct: 1062 AVAEAILPKGSARVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLG 1121
Query: 588 KTIQTIALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPH-LRKT 646
KT+Q IA +L + GP L++V + W LE +RW P + +++Y GS L+
Sbjct: 1122 KTVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHRELKAK 1181
Query: 647 LQAQMKASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVA 706
Q + + F+V +T+Y + ++ WK ++IDE R+K + + T +
Sbjct: 1182 RQEWAEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQ-S 1240
Query: 707 PHRLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETIL 766
RLLL +PL N ELW +++FL+P I + + ++P E+ +++
Sbjct: 1241 QQRLLLIDSPLHNTFLELWTMVHFLVPGISRP------YLSSPLRAPSEE---SQDYYHK 1291
Query: 767 IIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
++ RLH+V +PF+LRR K++VE QL K E+++KC +S QK LY + ++L G++
Sbjct: 1292 VVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALY-----EDVILQPGTQ 1346
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGG 868
L + +V+L+++CNHP + + S +V G
Sbjct: 1347 EALKSGHFVNVL-SILVRLQRICNHPGLVEP-RHPGSSYVAG 1386
Score = 277 (102.6 bits), Expect = 4.7e-62, Sum P(4) = 4.7e-62
Identities = 56/137 (40%), Positives = 87/137 (63%)
Query: 881 SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL 940
SGK E L +L KLKS G RVL+ QM +++ILE + ++ Y+R+D +E R +L
Sbjct: 1897 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1956
Query: 941 LKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 1000
++ FN D F +LST + G+NL ADTV+ +D+D NP D +AQ+ RIG+ +
Sbjct: 1957 MRSFNR-DRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 2015
Query: 1001 VRVLRLMTVNSVEERIL 1017
+ + RL++ NS+EE++L
Sbjct: 2016 IHIYRLVSGNSIEEKLL 2032
Score = 55 (24.4 bits), Expect = 4.7e-62, Sum P(4) = 4.7e-62
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 204 QERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQR-QLRAEVIACAR 262
Q R R+A + R IE ++ + LRV E+E + K LN Q+ R + +
Sbjct: 863 QSRLRRIAASTAREIECFWSNIEQVVEIKLRV--ELEEKRKKALNLQKVSRRGKELRPKG 920
Query: 263 RDTTLETAVN--VKAYKRTKRQGLKEARATEKLEKQQKVEA 301
D E++++ + KR L + ++ E ++ EA
Sbjct: 921 FDALQESSLDSGMSGRKRKASISLTDDEVDDEEETIEEEEA 961
Score = 39 (18.8 bits), Expect = 4.7e-62, Sum P(4) = 4.7e-62
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 1110 PDWLIKED 1117
P+WLI ED
Sbjct: 2366 PEWLISED 2373
Score = 37 (18.1 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 670 KGPLAKLHWKYMI 682
+ P K HW Y++
Sbjct: 804 EAPRPKSHWDYLL 816
>SGD|S000003796 [details] [associations]
symbol:RAD26 "Protein involved in transcription-coupled
nucleotide excision repair" species:4932 "Saccharomyces cerevisiae"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair"
evidence=IGI;IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 SGD:S000003796 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 EMBL:BK006943 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006283 GO:GO:0008094
GeneTree:ENSGT00590000083118 HOGENOM:HOG000170952 KO:K10841
EMBL:X81635 EMBL:L26910 EMBL:Z49535 PIR:JC2227 RefSeq:NP_012569.1
ProteinModelPortal:P40352 SMR:P40352 DIP:DIP-3008N IntAct:P40352
MINT:MINT-439055 STRING:P40352 PaxDb:P40352 PeptideAtlas:P40352
EnsemblFungi:YJR035W GeneID:853492 KEGG:sce:YJR035W CYGD:YJR035w
OMA:DENRIME OrthoDB:EOG44TSGZ NextBio:974125 Genevestigator:P40352
GermOnline:YJR035W Uniprot:P40352
Length = 1085
Score = 549 (198.3 bits), Expect = 5.0e-62, Sum P(3) = 5.0e-62
Identities = 146/468 (31%), Positives = 243/468 (51%)
Query: 625 FERWAPSVNVV-AYKGSPHLRKTLQAQMKASKFNVLLTTYEYVIKDKGPLAKLHWKYMII 683
+E W S A + S HL K + + ++L+TTY + L K+ W+Y ++
Sbjct: 411 YEDWKNSTRTKKALESSYHLDKLIDKVVTDG--HILITTYVGLRIHSDKLLKVKWQYAVL 468
Query: 684 DEGHRMKNHHCKLTHILNTFYVAPH-RLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTF 742
DEGH+++N +++ L + H R++L+GTP+QN L ELW+L +F+ P ++ F
Sbjct: 469 DEGHKIRNPDSEIS--LTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLPVF 526
Query: 743 EQWFNAPFATTGEKVELN-EEET-ILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIK 800
+Q F P G N + +T L ++ P+LLRR+K +V LP K E ++
Sbjct: 527 QQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADVAKDLPQKKEMVLF 586
Query: 801 CDMSGLQKVLY-RHMHTKGI-LLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNI 858
C ++ Q+ Y +H+ + + +G ++ I LRK+CNHP +
Sbjct: 587 CKLTKYQRSKYLEFLHSSDLNQIQNGKRN----------VLFGIDILRKICNHPDLLDRD 636
Query: 859 EEKFSDHVGGSGIVSGPDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYF 918
++ + G D R SGK +++ ++L G++ LLF Q Q+++ILE++
Sbjct: 637 TKRHNPDYG--------DPKR-SGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEEFI 687
Query: 919 SYRG-----FKYMRLDGTTKAEDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTV 973
S + Y+R+DGTT + R L+ +FN + + +F+L+TR GGLG+NL A+ +
Sbjct: 688 STKDPDLSHLNYLRMDGTTNIKGRQSLVDRFN--NESFDVFLLTTRVGGLGVNLTGANRI 745
Query: 974 IIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1033
IIFD DWNP D+QA++RA RIGQK EV + RLM S+EE+I +K + +++
Sbjct: 746 IIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRILTD 805
Query: 1034 GMFDQKSTGSERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEE 1081
+ E H L ++ ++ EE N T N ++SEE
Sbjct: 806 PKQKRFFKIHELHD-LFSLGGENGYSTEELNEEVQKHTENLKNSKSEE 852
Score = 175 (66.7 bits), Expect = 5.0e-62, Sum P(3) = 5.0e-62
Identities = 33/79 (41%), Positives = 44/79 (55%)
Query: 557 LKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVPLS 616
L YQ ++W+ L+ N GI+ DEMGLGKTIQ IA I L + GP LI+ P +
Sbjct: 297 LFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGLLTGPVLIVCPAT 356
Query: 617 TLSNWSLEFERWAPSVNVV 635
+ W EF+ W P + V
Sbjct: 357 VMKQWCNEFQHWWPPLRTV 375
Score = 41 (19.5 bits), Expect = 5.0e-62, Sum P(3) = 5.0e-62
Identities = 11/50 (22%), Positives = 22/50 (44%)
Query: 1059 EDEEENAVPDDETVNQMLARSEEEFQTYQRIDAERRKEQGKKSRLIEVSE 1108
++++EN+ +D+ + + L E +T D+ G S I E
Sbjct: 875 KEKKENSKTEDDRLIEGLLGGESNLETVMSHDSVVNSHAGSSSSNIITKE 924
>UNIPROTKB|F1MLB1 [details] [associations]
symbol:F1MLB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043968 "histone H2A acetylation" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0035267
"NuA4 histone acetyltransferase complex" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0016607 GO:GO:0003682
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:MQKQKLQ EMBL:DAAA02044957
EMBL:DAAA02044956 IPI:IPI01018591 Ensembl:ENSBTAT00000027216
Uniprot:F1MLB1
Length = 3137
Score = 480 (174.0 bits), Expect = 5.8e-62, Sum P(5) = 5.8e-62
Identities = 110/326 (33%), Positives = 173/326 (53%)
Query: 528 AMEEATYYSIAHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLG 587
A+ EA + + V A L+ G L++YQ GL+W+ L+ NLNGILADE GLG
Sbjct: 1060 AVAEAILPKGSARISTAVKLNAPALLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLG 1119
Query: 588 KTIQTIALITYLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPH-LRKT 646
KT+Q IA +L + GP L+IV + W LE +RW P + + Y GS L+
Sbjct: 1120 KTVQIIAFFAHLACNEGNWGPHLVIVRSCNILKWELELKRWCPGLKTLLYVGSHRELKAK 1179
Query: 647 LQAQMKASKFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVA 706
Q + + FN+ +T+Y+ K ++ WK ++IDE R+K + + T +
Sbjct: 1180 RQEWTEPNSFNICITSYKQFFKGFASFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQ-S 1238
Query: 707 PHRLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETIL 766
RLLL PL N ELW +++FL+P I + F P E+ N++
Sbjct: 1239 QQRLLLIDAPLHNTFLELWTMVHFLIPGISRPYLHF------PLKAPNEE---NQDYYHK 1289
Query: 767 IIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSE 826
++ RLH+V +PF+LRR K++VE QL K E+++KC +S QK LY + ++L G++
Sbjct: 1290 VVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALY-----EDVILQPGTQ 1344
Query: 827 XXXXXXXXXXXLMNTIVQLRKLCNHP 852
L + +++L+++CNHP
Sbjct: 1345 EALKSGHFVDVL-SILLRLQRICNHP 1369
Score = 271 (100.5 bits), Expect = 5.8e-62, Sum P(5) = 5.8e-62
Identities = 55/137 (40%), Positives = 86/137 (62%)
Query: 881 SGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAEDRGDL 940
SGK E L +L KLKS G RVL+ QM +++ILE + ++ Y+R+D +E R +L
Sbjct: 1896 SGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYIRIDENANSEQRQEL 1955
Query: 941 LKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 1000
++ FN D F +LST + G++L AD V+ +D D NP D +AQ+ RIG++ +
Sbjct: 1956 MRSFNR-DRRIFCALLSTHSRATGVSLVEADAVVFYDHDLNPVMDAKAQEWCDRIGRRKD 2014
Query: 1001 VRVLRLMTVNSVEERIL 1017
V + RL++ NS+EE++L
Sbjct: 2015 VHIYRLVSGNSIEEKLL 2031
Score = 54 (24.1 bits), Expect = 5.8e-62, Sum P(5) = 5.8e-62
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 204 QERENRVALNIERRIEELNGSLTSTLPEHLRVKAEIELRALKVLNFQRQLR 254
Q R R+A + R IE ++ + ++++ E+E + K LN Q+ R
Sbjct: 861 QNRLRRIAASTAREIEYFWSNIEQVV--EIKLQVELEEKRKKALNLQKVSR 909
Score = 47 (21.6 bits), Expect = 5.8e-62, Sum P(5) = 5.8e-62
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 114 QPLTPQLAMGVQGKRMEGVPSGPQMPPMS 142
+PL P + +GV G G+ S P PP S
Sbjct: 290 RPLLPGVGVGVGGTSAFGMTSPP--PPTS 316
Score = 45 (20.9 bits), Expect = 9.3e-39, Sum P(5) = 9.3e-39
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 1020 ARYKLNMDEKVIQAGM-FDQKSTGSERHQ 1047
A + N D K A Q STG+ RHQ
Sbjct: 1507 ATFSANPDAKAAAAPFQTSQASTGAPRHQ 1535
Score = 41 (19.5 bits), Expect = 4.8e-16, Sum P(5) = 4.8e-16
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 699 ILNTFYVAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAP 749
I++ F A ++ G P + E+ A+ +LP +ST + NAP
Sbjct: 1035 IMDQFKAAER--VIVGKPHTRDIAEVTAVAEAILPKGSARISTAVK-LNAP 1082
Score = 39 (18.8 bits), Expect = 5.8e-62, Sum P(5) = 5.8e-62
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 1110 PDWLIKED 1117
P+WLI ED
Sbjct: 2360 PEWLISED 2367
Score = 38 (18.4 bits), Expect = 5.0e-61, Sum P(5) = 5.0e-61
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 114 QPLTPQLAMGVQGKRMEGVPSGPQMP 139
QP P L + + GK P P P
Sbjct: 650 QPTPPTLHIPMPGKAQMQAPPLPAQP 675
Score = 38 (18.4 bits), Expect = 2.6e-60, Sum P(5) = 2.6e-60
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 273 VKAYKRTKRQGLKEARATEKLEKQQKVE 300
++AY R L+E E+ E+++K E
Sbjct: 409 LQAYLRQNDLDLEEEEEEEEEEEEEKSE 436
Score = 38 (18.4 bits), Expect = 3.7e-15, Sum P(3) = 3.7e-15
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 115 PLTPQLAMGVQGK 127
P+TP + +GV G+
Sbjct: 1700 PVTPPVVVGVPGR 1712
Score = 37 (18.1 bits), Expect = 8.3e-14, Sum P(6) = 8.3e-14
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 670 KGPLAKLHWKYMI 682
+ P K HW Y++
Sbjct: 802 EAPRPKSHWDYLL 814
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 513 (185.6 bits), Expect = 8.1e-62, Sum P(3) = 8.1e-62
Identities = 104/243 (42%), Positives = 154/243 (63%)
Query: 755 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHM 814
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+ +
Sbjct: 907 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFI 963
Query: 815 HTKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSG 874
T+ + L+N ++ L+K CNHP++F + V +G G
Sbjct: 964 LTRNFEALNSK-----GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP--VLPNGSYDG 1016
Query: 875 PDLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKA 934
L + SGK LL ++L KL+ GHRVL+F QMT+++++LED+ Y G+KY R+DG
Sbjct: 1017 SSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITG 1076
Query: 935 EDRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHR 994
R + + +FNAP ++ F F+LSTRAGGLG+NL TADTVII+DSDWNPH D+QA RAHR
Sbjct: 1077 GLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHR 1136
Query: 995 IGQ 997
IGQ
Sbjct: 1137 IGQ 1139
Score = 299 (110.3 bits), Expect = 3.0e-38, Sum P(3) = 3.0e-38
Identities = 63/163 (38%), Positives = 102/163 (62%)
Query: 655 KFNVLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTG 714
KF+VLLT+YE + D+ L + W +++DE HR+KN+ K +LN++ + ++LLLTG
Sbjct: 818 KFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKI-DYKLLLTG 876
Query: 715 TPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 774
TPLQN L EL+ LLNFL P F ++ F + F ++++E+ I ++LH +
Sbjct: 877 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 923
Query: 775 LRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTK 817
L P +LRRLK +V +P K E I++ ++S +QK Y+ + T+
Sbjct: 924 LGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR 966
Score = 219 (82.2 bits), Expect = 8.1e-62, Sum P(3) = 8.1e-62
Identities = 42/94 (44%), Positives = 56/94 (59%)
Query: 555 GKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVP 614
G L YQ++GL W+ + + ILADEMGLGKT+QTI + L ++ GP+L+ P
Sbjct: 698 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAP 757
Query: 615 LSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQ 648
LST+ NW EFE WAP VV Y G R ++
Sbjct: 758 LSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 791
Score = 38 (18.4 bits), Expect = 8.1e-62, Sum P(3) = 8.1e-62
Identities = 6/21 (28%), Positives = 17/21 (80%)
Query: 291 EKLEKQQKVEAERKKRQKHQE 311
+KL+ +++ +A+RKK+ + ++
Sbjct: 101 KKLKDKKEKKAKRKKKDEDED 121
Score = 37 (18.1 bits), Expect = 1.0e-61, Sum P(3) = 1.0e-61
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 277 KRTKRQGLKEARATEKLEKQQKVEAE 302
KR K++G + + + + ++K E+E
Sbjct: 64 KRKKKEGSNDELSENEEDLEEKSESE 89
>GENEDB_PFALCIPARUM|PF11_0053 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:5833
"Plasmodium falciparum" [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 662 (238.1 bits), Expect = 1.8e-61, P = 1.8e-61
Identities = 143/328 (43%), Positives = 200/328 (60%)
Query: 756 KVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMH 815
K+ N+ + II +LH +L+PF+LRRLK EVE LP K E I MS LQK LY +
Sbjct: 514 KISTNDNKQSEIITQLHTILKPFMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSDIL 573
Query: 816 TKGILLTDGSEXXXXXXXXXXXLMNTIVQLRKLCNHPFMFQNIEEKFSDHVGGSGIVSGP 875
+K I + ++N ++QLRK CNHP++F IEE + G
Sbjct: 574 SKNI------DVLNAMTGSKNQMLNILMQLRKCCNHPYLFDGIEEP--------PYIEGN 619
Query: 876 DLYRVSGKFELLDRILPKLKSTGHRVLLFCQMTQLMNILEDYFSYRGFKYMRLDGTTKAE 935
L SGK LLD++LP+LK RVLLF QMT+L++I++DY ++ + Y+R+DG+T +
Sbjct: 620 HLIETSGKMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPGD 679
Query: 936 DRGDLLKKFNAPDSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRI 995
+R + +FN P+S+YFIF+LSTRAGG+G+NL TAD VI+FDSD+NP D+QA DRAHRI
Sbjct: 680 ERQVRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRI 739
Query: 996 GQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHQFLQTILHQ 1055
GQK V V R +T NSVEE+I+ A KL +D +IQ G + S Q L IL+
Sbjct: 740 GQKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLIIQKGKLNLNSAKENNKQELHDILNF 799
Query: 1056 DDEEDEEENAVPD--DETVNQMLARSEE 1081
E + + DE ++ +LA +E+
Sbjct: 800 GAPEVYKTQDISSISDEDIDIILADAEK 827
Score = 660 (237.4 bits), Expect = 2.8e-60, Sum P(2) = 2.8e-60
Identities = 139/323 (43%), Positives = 191/323 (59%)
Query: 538 AHTVHEIVTEQASILVNGKLKEYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIALIT 597
A+ E + + + +NG +K YQ++GL W+ L+ +NGILADEMGLGKT+QTI+L+
Sbjct: 303 ANEEDEAIILKQPMNINGTMKPYQLEGLNWLYQLYRFKINGILADEMGLGKTLQTISLLC 362
Query: 598 YLMEKKKVNGPFLIIVPLSTLSNWSLEFERWAPSVNVVAYKGSPHLRKTLQAQMKASKFN 657
YL K + +II P STL NW E ++W + Y G+ RK L + S F+
Sbjct: 363 YLRFNKNIKKKSIIICPRSTLDNWYEEIKKWCTPMKAFKYYGNKDQRKELNRNLLHSDFD 422
Query: 658 VLLTTYEYVIKDKGPLAKLHWKYMIIDEGHRMKNHHCKLTHILNTFYVAPHRLLLTGTPL 717
VLLTTYE VIKDK L + W +++IDE HR+KN L+ + F + +RLL+TGTPL
Sbjct: 423 VLLTTYEIVIKDKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVR-FLRSENRLLITGTPL 481
Query: 718 QNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRP 777
N L ELW+LLNFL+P IF + F+ FN K+ N+ + II +LH +L+P
Sbjct: 482 HNNLKELWSLLNFLMPKIFDNSEEFDNLFNI------SKISTNDNKQSEIITQLHTILKP 535
Query: 778 FLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYRHMHTKGILLTDGSEXXXXXXXXXXX 837
F+LRRLK EVE LP K E I MS LQK LY + +K I +
Sbjct: 536 FMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSDILSKNI------DVLNAMTGSKNQ 589
Query: 838 LMNTIVQLRKLCNHPFMFQNIEE 860
++N ++QLRK CNHP++F IEE
Sbjct: 590 MLNILMQLRKCCNHPYLFDGIEE 612
Score = 42 (19.8 bits), Expect = 2.8e-60, Sum P(2) = 2.8e-60
Identities = 14/64 (21%), Positives = 33/64 (51%)
Query: 1028 EKVIQAGMFDQKSTGSERHQF--LQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQT 1085
+K++ G + ++ G QF ++ + + ED+ N + + E +N ++ EE +
Sbjct: 950 KKMVLHG-WRAEARGGHDFQFFNVEKLDELEKIEDKWNNYMINQEKINVLIEAQNEE-KD 1007
Query: 1086 YQRI 1089
Y++I
Sbjct: 1008 YEKI 1011
Score = 37 (18.1 bits), Expect = 9.6e-60, Sum P(2) = 9.6e-60
Identities = 12/45 (26%), Positives = 19/45 (42%)
Query: 1044 ERHQFLQTILHQDDEEDEEENAVPDDETVNQMLARSEEEFQTYQR 1088
E+ Q + + E+ E N + +T N+ S EE Y R
Sbjct: 1306 EKLQLPSNLRYDFMEKREVLNITEEVKTENEENVLSNEELAYYDR 1350
WARNING: HSPs involving 383 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1331 1114 0.00089 123 3 11 22 0.41 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 633
No. of states in DFA: 624 (66 KB)
Total size of DFA: 486 KB (2226 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 110.04u 0.09s 110.13t Elapsed: 00:00:32
Total cpu time: 110.23u 0.10s 110.33t Elapsed: 00:00:34
Start: Thu Aug 15 11:44:20 2013 End: Thu Aug 15 11:44:54 2013
WARNINGS ISSUED: 2