BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15440
(79 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O15173|PGRC2_HUMAN Membrane-associated progesterone receptor component 2 OS=Homo
sapiens GN=PGRMC2 PE=1 SV=1
Length = 223
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 3 ISRRDASRAFATFTVTPG--KDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGE 60
+ RDASR ATF + +DEYDDLSDLN + ESVREWE Q KY Y+G+LLKPGE
Sbjct: 146 FAGRDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGE 205
Query: 61 SHINYEDEEKGSIEEKKD 78
Y DEE K+D
Sbjct: 206 EPSEYTDEEDTKDHNKQD 223
>sp|Q5XIU9|PGRC2_RAT Membrane-associated progesterone receptor component 2 OS=Rattus
norvegicus GN=Pgrmc2 PE=1 SV=1
Length = 217
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 3 ISRRDASRAFATFTVT--PGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGE 60
+ RDASR ATF + +DEYDDLSDLN + ESVREWE Q KY Y+G+LLKPGE
Sbjct: 140 FAGRDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGE 199
Query: 61 SHINYEDEEKGSIEEKKD 78
Y DEE K+D
Sbjct: 200 EPSEYTDEEDTKDHSKQD 217
>sp|Q80UU9|PGRC2_MOUSE Membrane-associated progesterone receptor component 2 OS=Mus
musculus GN=Pgrmc2 PE=1 SV=2
Length = 217
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 3 ISRRDASRAFATFTVT--PGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGE 60
+ RDASR ATF + +DEYDDLSDLN + ESVREWE Q KY Y+G+LLKPGE
Sbjct: 140 FAGRDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGE 199
Query: 61 SHINYEDEEKGSIEEKKD 78
Y DEE K+D
Sbjct: 200 EPSEYTDEEDTKDHSKQD 217
>sp|Q95250|PGRC1_PIG Membrane-associated progesterone receptor component 1 OS=Sus scrofa
GN=PGRMC1 PE=1 SV=3
Length = 194
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 3 ISRRDASRAFATFTVT--PGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGE 60
+ RDASR ATF + KDEYDDLSDL PA+ E++ +W+ Q KY ++GKLLK GE
Sbjct: 115 FAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKLLKEGE 174
Query: 61 SHINYEDEE 69
Y DEE
Sbjct: 175 EPTVYSDEE 183
>sp|Q5ZKN2|PGRC1_CHICK Membrane-associated progesterone receptor component 1 OS=Gallus
gallus GN=PGRMC1 PE=2 SV=3
Length = 192
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 3 ISRRDASRAFATFTVT--PGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGE 60
+ RDASR ATF + +D+YDDLSDLN + E++R+WE Q KY ++GKLLK GE
Sbjct: 114 FAGRDASRGLATFCLDKEALRDDYDDLSDLNATQQETLRDWESQFTFKYHHVGKLLKDGE 173
Query: 61 SHINYEDEEKGSIEEKK 77
Y DEE+ ++ K
Sbjct: 174 EPTVYSDEEEKDAQDAK 190
>sp|P70580|PGRC1_RAT Membrane-associated progesterone receptor component 1 OS=Rattus
norvegicus GN=Pgrmc1 PE=1 SV=3
Length = 195
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 3 ISRRDASRAFATFTVT--PGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGE 60
+ RDASR ATF + KDEYDDLSDL PA+ E++ +W+ Q KY ++GKLLK GE
Sbjct: 116 FAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKLLKEGE 175
Query: 61 SHINYEDEE 69
Y D+E
Sbjct: 176 EPTVYSDDE 184
>sp|O55022|PGRC1_MOUSE Membrane-associated progesterone receptor component 1 OS=Mus
musculus GN=Pgrmc1 PE=1 SV=4
Length = 195
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 3 ISRRDASRAFATFTVT--PGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGE 60
+ RDASR ATF + KDEYDDLSDL PA+ E++ +W+ Q KY ++GKLLK GE
Sbjct: 116 FAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKLLKEGE 175
Query: 61 SHINYEDEE 69
Y D+E
Sbjct: 176 EPTVYSDDE 184
>sp|Q17QC0|PGRC1_BOVIN Membrane-associated progesterone receptor component 1 OS=Bos taurus
GN=PGRMC1 PE=2 SV=3
Length = 194
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 3 ISRRDASRAFATFTVT--PGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGE 60
+ RDASR ATF + KDEYDDLSDL PA+ E++ +W+ Q KY ++GKLLK GE
Sbjct: 115 FAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKLLKDGE 174
Query: 61 SHINYEDEE 69
Y D+E
Sbjct: 175 EPTVYSDKE 183
>sp|Q5RED0|PGRC1_PONAB Membrane-associated progesterone receptor component 1 OS=Pongo
abelii GN=PGRMC1 PE=2 SV=3
Length = 195
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 3 ISRRDASRAFATFTVT--PGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGE 60
+ RDASR ATF + KDEYDDLSDL A+ E++ +WE Q KY ++GKLLK GE
Sbjct: 116 FAGRDASRGLATFCLDKEALKDEYDDLSDLTAAQQETLSDWESQFTFKYHHVGKLLKEGE 175
Query: 61 SHINYEDEE 69
Y DEE
Sbjct: 176 EPTVYSDEE 184
>sp|O00264|PGRC1_HUMAN Membrane-associated progesterone receptor component 1 OS=Homo
sapiens GN=PGRMC1 PE=1 SV=3
Length = 195
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 3 ISRRDASRAFATFTVT--PGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGE 60
+ RDASR ATF + KDEYDDLSDL A+ E++ +WE Q KY ++GKLLK GE
Sbjct: 116 FAGRDASRGLATFCLDKEALKDEYDDLSDLTAAQQETLSDWESQFTFKYHHVGKLLKEGE 175
Query: 61 SHINYEDEE 69
Y DEE
Sbjct: 176 EPTVYSDEE 184
>sp|O13995|DAP1_SCHPO Cytochrome P450 regulator dap1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=dap1 PE=1 SV=1
Length = 166
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 7 DASRAFAT------FTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGE 60
DASR A F +E DD SDLN E +++ +W+ D KY +G+L+ P E
Sbjct: 90 DASRGLAKNSFDDEFIPDSDAEELDDCSDLNDEERQALNDWKAFFDQKYQAVGRLISPRE 149
Query: 61 S 61
+
Sbjct: 150 A 150
>sp|Q9M2Z4|MSBP2_ARATH Membrane steroid-binding protein 2 OS=Arabidopsis thaliana GN=MSBP2
PE=1 SV=1
Length = 233
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 3 ISRRDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLK 57
+ +DASRA A + +D D+S L E E++++WE + SKY +G + K
Sbjct: 115 FAGKDASRALAKMSFE-DQDLTGDISGLGAFELEALQDWEYKFMSKYVKVGTIQK 168
>sp|Q9XFM6|MSBP1_ARATH Membrane steroid-binding protein 1 OS=Arabidopsis thaliana GN=MSBP1
PE=1 SV=2
Length = 220
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 3 ISRRDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKL 55
+ +DASRA A + KD D+S L P E +++++WE + SKY +G +
Sbjct: 119 FAGKDASRALAKMSFE-EKDLTWDVSGLGPFELDALQDWEYKFMSKYAKVGTV 170
>sp|Q8WUJ1|NEUFC_HUMAN Neuferricin OS=Homo sapiens GN=CYB5D2 PE=2 SV=1
Length = 264
Score = 32.7 bits (73), Expect = 0.68, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 6 RDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKL 55
RDASRAF T + DD+SDL+ AE ++ W + Y +G++
Sbjct: 85 RDASRAFVTGDCSEA-GLVDDVSDLSAAEMLTLHNWLSFYEKNYVCVGRV 133
>sp|Q28FI8|NEUFC_XENTR Neuferricin OS=Xenopus tropicalis GN=cyb5d2 PE=2 SV=1
Length = 273
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 3 ISRRDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKL 55
+ +DASRA+ T T K DD+++L+P + + W Y IGKL
Sbjct: 91 FAGKDASRAYMTGDFTE-KGLVDDVTELSPLQMLHLHNWLSFYQQNYITIGKL 142
>sp|Q12091|DAP1_YEAST Damage response protein 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=DAP1 PE=1 SV=1
Length = 152
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 2 QISRRDASRAFA--TFTVTPGKD---EYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLL 56
+ DASR A +F + KD D L DL + +++ EW+E ++KY IG L+
Sbjct: 86 NFAGHDASRGLALNSFDLDVIKDWDQPIDPLDDLTKEQIDALDEWQEHFENKYPCIGTLI 145
Query: 57 -KPG 59
+PG
Sbjct: 146 PEPG 149
>sp|P42080|RPOC1_CYAPA DNA-directed RNA polymerase subunit beta' OS=Cyanophora paradoxa
GN=rpoC1 PE=3 SV=2
Length = 636
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 19 PGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHINY 65
P ++Y D +N A E +R+W E++ +GK+ KP INY
Sbjct: 2 PKHEQYFDYVKINLASPERIRQWGERILKNGEIVGKITKP--ETINY 46
>sp|Q6AY62|NEUFC_RAT Neuferricin OS=Rattus norvegicus GN=Cyb5d2 PE=2 SV=1
Length = 263
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 6 RDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLL 56
RDASRAF T + DD++ L+ +E ++ W + Y ++G+L+
Sbjct: 85 RDASRAFVTGDYSEA-GLVDDVNGLSSSEILTLHNWLSFYEKNYVFVGRLI 134
>sp|Q5SSH8|NEUFC_MOUSE Neuferricin OS=Mus musculus GN=Cyb5d2 PE=1 SV=1
Length = 263
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 6 RDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLL 56
RDASRAF T + DD++ L+ +E ++ W + Y ++G+L+
Sbjct: 85 RDASRAFVTGDYSEA-GLVDDINGLSSSEILTLHNWLSFYEKNYVFVGRLV 134
>sp|Q8QZZ8|RAB38_MOUSE Ras-related protein Rab-38 OS=Mus musculus GN=Rab38 PE=1 SV=1
Length = 211
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 12/49 (24%)
Query: 2 QISRRDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYT 50
++ R+A AF F VT PA +E+V +W+ LDSK T
Sbjct: 77 RVYYREAMGAFIVFDVT------------RPATFEAVAKWKNDLDSKLT 113
>sp|A2CES0|NEUFC_DANRE Neuferricin OS=Danio rerio GN=cyb5d2 PE=3 SV=1
Length = 267
Score = 29.3 bits (64), Expect = 7.2, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 6 RDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLL 56
+DASRAF T T +D+SD + ++ ++ +W YT +GKL+
Sbjct: 101 KDASRAFITGDFTEAGLS-NDVSDFSESQIVALYDWLSFYQRDYTPVGKLI 150
>sp|Q6R7K1|Y022_OSHVF Uncharacterized protein ORF22 OS=Ostreid herpesvirus 1 (isolate
France) GN=ORF22 PE=4 SV=1
Length = 1632
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 25 DDLSDLNPAEWE-SVREWEEQLDSKYTYIGKLLKPGESHI 63
DDL+++ P E E +V+EW+ + Y+ K KP E+++
Sbjct: 152 DDLNNITPKEGEATVKEWDSLPGGELRYLSKANKPDETYM 191
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.307 0.129 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,805,837
Number of Sequences: 539616
Number of extensions: 1288824
Number of successful extensions: 2711
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2694
Number of HSP's gapped (non-prelim): 33
length of query: 79
length of database: 191,569,459
effective HSP length: 50
effective length of query: 29
effective length of database: 164,588,659
effective search space: 4773071111
effective search space used: 4773071111
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 55 (25.8 bits)