BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy15443
         (73 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9Z1Z0|USO1_MOUSE General vesicular transport factor p115 OS=Mus musculus GN=Uso1
           PE=1 SV=2
          Length = 959

 Score = 47.0 bits (110), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/55 (43%), Positives = 34/55 (61%)

Query: 2   EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIY 56
           E F++KL  +S+HE+YSRA++KPQ +       + D+EF KL K LE      IY
Sbjct: 575 ENFIEKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIY 629


>sp|P41541|USO1_BOVIN General vesicular transport factor p115 OS=Bos taurus GN=USO1 PE=1
           SV=1
          Length = 961

 Score = 46.6 bits (109), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/55 (43%), Positives = 34/55 (61%)

Query: 2   EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIY 56
           E F++KL  +S+HE+YSRA++KPQ +       + D+EF KL K LE      IY
Sbjct: 575 ENFIEKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIY 629


>sp|O60763|USO1_HUMAN General vesicular transport factor p115 OS=Homo sapiens GN=USO1
           PE=1 SV=2
          Length = 962

 Score = 46.6 bits (109), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/55 (43%), Positives = 34/55 (61%)

Query: 2   EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIY 56
           E F++KL  +S+HE+YSRA++KPQ +       + D+EF KL K LE      IY
Sbjct: 575 ENFIEKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIY 629


>sp|P41542|USO1_RAT General vesicular transport factor p115 OS=Rattus norvegicus
           GN=Uso1 PE=1 SV=1
          Length = 959

 Score = 45.8 bits (107), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/55 (41%), Positives = 34/55 (61%)

Query: 2   EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIY 56
           E +++KL  +S+HE+YSRA++KPQ +       + D+EF KL K LE      IY
Sbjct: 575 ENYIEKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIY 629


>sp|Q6IQS6|SAE1_DANRE SUMO-activating enzyme subunit 1 OS=Danio rerio GN=sae1 PE=2 SV=1
          Length = 348

 Score = 30.4 bits (67), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 3/40 (7%)

Query: 21  AKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIYAKAK 60
           AKKP++DP           FC L +ALE    DW   KAK
Sbjct: 196 AKKPKIDPNETTMVKKTISFCSLKEALE---VDWTTEKAK 232


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.314    0.129    0.372 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,408,079
Number of Sequences: 539616
Number of extensions: 759092
Number of successful extensions: 1464
Number of sequences better than 100.0: 5
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1460
Number of HSP's gapped (non-prelim): 5
length of query: 73
length of database: 191,569,459
effective HSP length: 45
effective length of query: 28
effective length of database: 167,286,739
effective search space: 4684028692
effective search space used: 4684028692
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)