Query psy15447
Match_columns 457
No_of_seqs 281 out of 3031
Neff 9.6
Searched_HMMs 46136
Date Fri Aug 16 21:18:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15447.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15447hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02822 serine palmitoyltrans 100.0 9.1E-65 2E-69 510.4 50.1 430 18-452 43-479 (481)
2 KOG1358|consensus 100.0 5.2E-65 1.1E-69 464.3 31.0 414 35-451 49-466 (467)
3 COG0156 BioF 7-keto-8-aminopel 100.0 8E-64 1.7E-68 478.8 40.6 362 67-447 26-387 (388)
4 PLN02955 8-amino-7-oxononanoat 100.0 1.1E-56 2.5E-61 438.9 41.1 347 78-453 100-464 (476)
5 KOG1359|consensus 100.0 7.2E-54 1.6E-58 377.2 30.2 362 64-451 49-413 (417)
6 TIGR01821 5aminolev_synth 5-am 100.0 3.9E-50 8.5E-55 399.9 43.3 354 78-453 43-399 (402)
7 PRK13393 5-aminolevulinate syn 100.0 4.5E-50 9.8E-55 399.6 42.9 352 78-451 43-397 (406)
8 KOG1360|consensus 100.0 8.5E-51 1.8E-55 371.4 32.4 353 80-454 171-528 (570)
9 PLN03227 serine palmitoyltrans 100.0 1.2E-49 2.7E-54 392.4 40.7 369 83-452 1-384 (392)
10 COG4992 ArgD Ornithine/acetylo 100.0 2.6E-50 5.5E-55 377.5 33.2 348 63-453 24-401 (404)
11 PRK09064 5-aminolevulinate syn 100.0 5.7E-49 1.2E-53 392.3 43.2 352 79-452 45-399 (407)
12 PLN02483 serine palmitoyltrans 100.0 8.5E-49 1.8E-53 395.4 43.5 362 78-452 98-468 (489)
13 PRK13392 5-aminolevulinate syn 100.0 2.8E-47 6.2E-52 380.1 41.3 353 78-452 44-399 (410)
14 TIGR01822 2am3keto_CoA 2-amino 100.0 4.4E-46 9.5E-51 370.3 44.0 381 43-452 9-391 (393)
15 COG0160 GabT 4-aminobutyrate a 100.0 3E-46 6.5E-51 361.0 38.3 360 63-451 38-446 (447)
16 PRK07179 hypothetical protein; 100.0 1.5E-45 3.1E-50 367.5 43.6 348 78-451 52-399 (407)
17 COG0161 BioA Adenosylmethionin 100.0 4.2E-46 9E-51 357.4 33.0 374 48-453 10-446 (449)
18 KOG1357|consensus 100.0 3.5E-47 7.6E-52 353.6 24.3 358 80-450 136-502 (519)
19 TIGR01825 gly_Cac_T_rel pyrido 100.0 1.8E-44 3.8E-49 357.9 43.0 367 63-451 16-382 (385)
20 PRK05958 8-amino-7-oxononanoat 100.0 1.2E-43 2.7E-48 352.0 42.7 363 63-447 22-384 (385)
21 COG0001 HemL Glutamate-1-semia 100.0 4E-44 8.7E-49 339.3 36.6 387 34-453 5-431 (432)
22 PLN02760 4-aminobutyrate:pyruv 100.0 3E-44 6.6E-49 361.5 36.7 378 43-452 49-493 (504)
23 TIGR03246 arg_catab_astC succi 100.0 8.5E-44 1.9E-48 352.6 37.2 348 63-451 17-396 (397)
24 TIGR00858 bioF 8-amino-7-oxono 100.0 9E-43 2E-47 342.6 41.5 358 67-445 3-360 (360)
25 PRK06939 2-amino-3-ketobutyrat 100.0 4.7E-42 1E-46 342.0 43.3 385 38-451 8-394 (397)
26 PRK12403 putative aminotransfe 100.0 1.8E-42 3.8E-47 346.9 38.7 361 63-452 36-454 (460)
27 PRK07505 hypothetical protein; 100.0 5.2E-42 1.1E-46 341.2 41.9 357 63-450 28-399 (402)
28 PRK03715 argD acetylornithine 100.0 9.2E-43 2E-47 343.3 34.5 343 63-451 18-394 (395)
29 PRK05937 8-amino-7-oxononanoat 100.0 1E-41 2.3E-46 335.1 41.5 342 80-453 4-353 (370)
30 PRK11522 putrescine--2-oxoglut 100.0 3.2E-42 6.8E-47 343.9 36.3 359 63-454 63-455 (459)
31 PRK04073 rocD ornithine--oxo-a 100.0 7.1E-42 1.5E-46 339.4 37.3 339 63-448 22-395 (396)
32 TIGR03372 putres_am_tran putre 100.0 1E-41 2.2E-46 337.9 36.9 352 64-448 58-442 (442)
33 PRK07482 hypothetical protein; 100.0 3E-41 6.4E-46 338.2 39.9 363 63-452 32-456 (461)
34 KOG1402|consensus 100.0 1E-42 2.3E-47 311.4 25.2 372 32-449 19-426 (427)
35 PRK06062 hypothetical protein; 100.0 3.1E-41 6.6E-46 337.2 38.4 359 63-452 35-447 (451)
36 PRK08117 4-aminobutyrate amino 100.0 2.2E-41 4.7E-46 338.9 37.3 361 64-453 26-432 (433)
37 PRK06105 aminotransferase; Pro 100.0 2.3E-41 4.9E-46 338.9 36.8 360 63-452 30-451 (460)
38 PRK12381 bifunctional succinyl 100.0 2.1E-41 4.6E-46 336.5 36.1 350 63-453 21-402 (406)
39 PRK07986 adenosylmethionine--8 100.0 2.1E-41 4.5E-46 335.5 35.3 346 64-450 26-423 (428)
40 PRK06173 adenosylmethionine--8 100.0 6E-41 1.3E-45 332.7 37.5 350 65-453 28-428 (429)
41 PRK13360 omega amino acid--pyr 100.0 9.5E-41 2.1E-45 332.8 38.2 356 63-451 28-441 (442)
42 PRK06943 adenosylmethionine--8 100.0 1.1E-40 2.3E-45 333.1 38.6 354 63-451 36-447 (453)
43 PRK06082 4-aminobutyrate amino 100.0 4.1E-41 8.8E-46 336.7 35.5 359 64-455 55-456 (459)
44 PRK05965 hypothetical protein; 100.0 1.3E-40 2.8E-45 333.5 38.4 362 63-453 28-450 (459)
45 PRK06541 hypothetical protein; 100.0 1.7E-40 3.7E-45 332.3 39.1 362 63-452 34-457 (460)
46 PRK07678 aminotransferase; Val 100.0 8.1E-41 1.8E-45 334.5 36.7 364 64-451 30-450 (451)
47 PLN02624 ornithine-delta-amino 100.0 1.5E-40 3.2E-45 334.7 37.3 351 63-450 57-444 (474)
48 PRK07481 hypothetical protein; 100.0 1.4E-40 2.9E-45 332.7 36.6 383 48-452 7-447 (449)
49 PRK07046 aminotransferase; Val 100.0 3.6E-40 7.7E-45 329.0 39.1 407 1-452 1-452 (453)
50 KOG1404|consensus 100.0 2.7E-41 5.8E-46 309.6 28.3 360 61-444 30-432 (442)
51 PRK08593 4-aminobutyrate amino 100.0 1.6E-40 3.4E-45 331.9 36.3 361 63-453 24-432 (445)
52 PRK06058 4-aminobutyrate amino 100.0 2E-40 4.3E-45 331.9 37.0 363 63-450 38-442 (443)
53 PLN02482 glutamate-1-semialdeh 100.0 1.9E-40 4.2E-45 331.2 36.5 382 35-451 52-474 (474)
54 TIGR01885 Orn_aminotrans ornit 100.0 2.5E-40 5.5E-45 329.0 37.1 347 63-448 19-400 (401)
55 PRK05964 adenosylmethionine--8 100.0 4E-40 8.7E-45 328.8 38.1 353 63-451 24-423 (423)
56 PRK06916 adenosylmethionine--8 100.0 4.3E-40 9.2E-45 329.8 38.4 359 63-453 38-458 (460)
57 PRK07030 adenosylmethionine--8 100.0 6.2E-40 1.3E-44 328.4 39.1 356 64-451 30-447 (466)
58 PRK09221 beta alanine--pyruvat 100.0 5.3E-40 1.1E-44 327.7 38.4 354 63-451 31-444 (445)
59 PRK12389 glutamate-1-semialdeh 100.0 5.8E-40 1.3E-44 327.1 38.1 380 35-450 5-427 (428)
60 PRK03244 argD acetylornithine 100.0 3E-40 6.5E-45 328.6 35.6 343 64-452 26-396 (398)
61 PRK07480 putative aminotransfe 100.0 8E-40 1.7E-44 327.1 38.2 359 63-452 32-450 (456)
62 cd06454 KBL_like KBL_like; thi 100.0 1.3E-39 2.8E-44 318.9 39.0 348 80-447 1-348 (349)
63 PRK00615 glutamate-1-semialdeh 100.0 3.9E-40 8.4E-45 326.5 35.5 383 35-452 6-430 (433)
64 PRK08742 adenosylmethionine--8 100.0 1.2E-39 2.6E-44 326.1 39.2 359 64-454 47-471 (472)
65 PRK05093 argD bifunctional N-s 100.0 6.1E-40 1.3E-44 326.3 36.6 348 63-451 22-401 (403)
66 PRK05630 adenosylmethionine--8 100.0 8.7E-40 1.9E-44 324.0 37.0 353 63-450 22-420 (422)
67 PRK05639 4-aminobutyrate amino 100.0 1E-39 2.2E-44 326.0 37.7 361 63-452 35-445 (457)
68 PRK01278 argD acetylornithine 100.0 4.3E-40 9.3E-45 326.3 34.5 343 63-450 13-388 (389)
69 PRK07036 hypothetical protein; 100.0 2.7E-39 5.9E-44 324.1 38.8 360 63-452 33-454 (466)
70 PRK07495 4-aminobutyrate amino 100.0 1.8E-39 3.9E-44 322.4 37.0 361 64-453 23-424 (425)
71 PRK09264 diaminobutyrate--2-ox 100.0 1.7E-39 3.7E-44 323.7 35.3 359 63-455 21-421 (425)
72 PRK04612 argD acetylornithine 100.0 3.3E-39 7.3E-44 318.8 36.8 351 63-453 22-406 (408)
73 PRK00854 rocD ornithine--oxo-a 100.0 3.4E-39 7.4E-44 321.3 37.0 343 63-449 23-400 (401)
74 PRK06938 diaminobutyrate--2-ox 100.0 2.3E-39 4.9E-44 324.2 35.3 362 63-453 45-463 (464)
75 PRK08360 4-aminobutyrate amino 100.0 6.5E-39 1.4E-43 319.7 38.2 360 63-452 23-428 (443)
76 TIGR02407 ectoine_ectB diamino 100.0 2.9E-39 6.2E-44 320.5 35.2 353 63-450 17-412 (412)
77 PRK00062 glutamate-1-semialdeh 100.0 5.5E-39 1.2E-43 320.4 36.9 382 35-451 3-425 (426)
78 PLN00144 acetylornithine trans 100.0 2.6E-39 5.7E-44 317.9 34.0 340 67-451 1-381 (382)
79 PRK07483 hypothetical protein; 100.0 4.7E-39 1E-43 320.7 35.7 369 63-453 12-440 (443)
80 PRK05769 4-aminobutyrate amino 100.0 1.3E-38 2.8E-43 317.8 38.3 356 63-451 36-440 (441)
81 PRK02936 argD acetylornithine 100.0 6.2E-39 1.3E-43 316.9 34.8 339 63-447 11-376 (377)
82 PRK06149 hypothetical protein; 100.0 1.1E-38 2.5E-43 345.3 39.1 362 63-451 567-971 (972)
83 PRK06931 diaminobutyrate--2-ox 100.0 1.6E-38 3.5E-43 317.9 37.0 367 63-453 40-457 (459)
84 PRK06777 4-aminobutyrate amino 100.0 2.4E-38 5.1E-43 314.9 37.9 357 64-449 23-420 (421)
85 PRK06917 hypothetical protein; 100.0 8.1E-39 1.8E-43 319.4 34.6 366 66-453 16-440 (447)
86 PTZ00125 ornithine aminotransf 100.0 1.6E-38 3.5E-43 316.5 36.0 350 63-452 13-397 (400)
87 TIGR00508 bioA adenosylmethion 100.0 2.7E-38 5.9E-43 314.4 36.7 348 64-450 28-426 (427)
88 PRK08297 L-lysine aminotransfe 100.0 1.4E-38 2.9E-43 317.4 33.7 350 65-451 28-442 (443)
89 PRK09792 4-aminobutyrate trans 100.0 2.4E-38 5.1E-43 314.9 34.8 359 63-449 22-420 (421)
90 cd00610 OAT_like Acetyl ornith 100.0 4.3E-38 9.4E-43 315.1 36.3 356 63-447 18-412 (413)
91 TIGR00709 dat 2,4-diaminobutyr 100.0 4.9E-38 1.1E-42 314.3 36.5 363 63-454 21-439 (442)
92 PRK04013 argD acetylornithine/ 100.0 4.8E-38 1E-42 304.7 34.0 332 62-452 5-362 (364)
93 TIGR00700 GABAtrnsam 4-aminobu 100.0 1.3E-37 2.8E-42 310.3 36.8 358 63-449 15-419 (420)
94 TIGR00713 hemL glutamate-1-sem 100.0 1.5E-37 3.3E-42 311.2 36.8 381 36-451 2-423 (423)
95 PRK06918 4-aminobutyrate amino 100.0 4E-37 8.8E-42 309.0 39.0 385 35-456 16-449 (451)
96 TIGR00699 GABAtrns_euk 4-amino 100.0 3E-38 6.5E-43 313.3 30.3 345 63-448 40-464 (464)
97 PRK06148 hypothetical protein; 100.0 7.3E-38 1.6E-42 339.0 35.6 363 62-451 605-1011(1013)
98 KOG1401|consensus 100.0 2.1E-37 4.7E-42 286.3 29.6 380 35-452 9-432 (433)
99 PRK02627 acetylornithine amino 100.0 3.7E-36 8E-41 299.4 36.5 343 63-451 21-395 (396)
100 TIGR03251 LAT_fam L-lysine 6-t 100.0 5.2E-37 1.1E-41 305.9 30.3 345 66-446 22-430 (431)
101 PRK04260 acetylornithine amino 100.0 3.2E-36 6.8E-41 297.1 33.7 338 63-447 11-374 (375)
102 PRK06209 glutamate-1-semialdeh 100.0 3.5E-36 7.5E-41 300.0 31.3 376 37-452 2-407 (431)
103 PLN02974 adenosylmethionine-8- 100.0 7.4E-36 1.6E-40 312.1 34.5 386 38-448 313-816 (817)
104 PRK08088 4-aminobutyrate amino 100.0 2.1E-34 4.6E-39 287.8 37.2 360 63-451 23-424 (425)
105 TIGR00707 argD acetylornithine 100.0 1.6E-34 3.6E-39 285.9 34.0 339 63-447 9-378 (379)
106 TIGR03576 pyridox_MJ0158 pyrid 100.0 1.7E-33 3.7E-38 272.4 32.4 309 88-448 27-345 (346)
107 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 1.3E-32 2.8E-37 270.6 33.2 328 97-451 18-369 (370)
108 PF00202 Aminotran_3: Aminotra 100.0 4.2E-33 9.2E-38 269.3 25.2 294 66-381 1-338 (339)
109 PRK13034 serine hydroxymethylt 100.0 7.4E-32 1.6E-36 267.9 32.3 336 81-450 29-392 (416)
110 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 3.2E-30 7E-35 255.0 36.2 351 80-456 18-387 (387)
111 KOG1403|consensus 100.0 2.9E-31 6.3E-36 235.1 19.2 363 62-451 28-438 (452)
112 COG0436 Aspartate/tyrosine/aro 100.0 5E-29 1.1E-33 244.5 35.0 339 80-451 28-392 (393)
113 PF00155 Aminotran_1_2: Aminot 100.0 1.1E-29 2.3E-34 250.1 29.6 333 81-444 2-363 (363)
114 PRK06108 aspartate aminotransf 100.0 5.6E-28 1.2E-32 239.5 35.4 336 81-449 25-381 (382)
115 PLN03226 serine hydroxymethylt 100.0 4E-28 8.7E-33 243.0 33.4 336 80-450 34-419 (475)
116 PRK06207 aspartate aminotransf 100.0 2.3E-27 4.9E-32 236.0 37.8 342 80-452 39-404 (405)
117 PLN00175 aminotransferase fami 100.0 1.6E-27 3.4E-32 237.5 36.1 340 79-449 53-412 (413)
118 PRK02731 histidinol-phosphate 100.0 1.3E-27 2.8E-32 235.5 34.7 325 78-450 30-366 (367)
119 PRK13580 serine hydroxymethylt 100.0 7.2E-28 1.6E-32 236.6 31.7 339 80-451 49-446 (493)
120 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 1.7E-27 3.7E-32 233.9 34.3 327 97-448 11-360 (361)
121 PRK07681 aspartate aminotransf 100.0 2.6E-27 5.7E-32 235.6 35.5 334 79-447 31-385 (399)
122 PRK06290 aspartate aminotransf 100.0 2.8E-27 6E-32 235.1 35.2 345 78-452 42-407 (410)
123 TIGR03392 FeS_syn_CsdA cystein 100.0 4.9E-27 1.1E-31 233.8 36.8 338 79-451 16-396 (398)
124 PRK07682 hypothetical protein; 100.0 3.9E-27 8.5E-32 232.9 34.8 336 81-451 21-377 (378)
125 PRK03158 histidinol-phosphate 100.0 3.1E-27 6.6E-32 232.1 33.5 319 80-447 29-358 (359)
126 cd06502 TA_like Low-specificit 100.0 2.4E-28 5.3E-33 238.0 25.3 324 84-446 1-337 (338)
127 PRK09082 methionine aminotrans 100.0 3.7E-27 8E-32 233.5 33.6 335 79-446 29-385 (386)
128 PLN02721 threonine aldolase 100.0 1.7E-27 3.8E-32 233.4 30.9 330 81-450 6-352 (353)
129 PRK03317 histidinol-phosphate 100.0 4.2E-27 9E-32 231.8 33.6 319 81-449 27-363 (368)
130 PRK10874 cysteine sulfinate de 100.0 8E-27 1.7E-31 232.5 36.0 338 79-451 19-399 (401)
131 PRK05764 aspartate aminotransf 100.0 1.1E-26 2.3E-31 231.1 36.2 339 79-451 30-392 (393)
132 TIGR01976 am_tr_V_VC1184 cyste 100.0 1.1E-26 2.4E-31 231.4 34.6 330 80-444 18-397 (397)
133 PRK08153 histidinol-phosphate 100.0 2E-26 4.4E-31 226.6 35.4 329 79-452 30-367 (369)
134 TIGR03540 DapC_direct LL-diami 100.0 2.2E-26 4.8E-31 227.9 35.9 334 79-446 28-382 (383)
135 PRK09295 bifunctional cysteine 100.0 2.7E-26 5.9E-31 228.9 36.4 335 80-449 24-403 (406)
136 TIGR03537 DapC succinyldiamino 100.0 1.6E-26 3.4E-31 226.0 33.6 328 81-446 1-349 (350)
137 PRK06225 aspartate aminotransf 100.0 2.5E-26 5.4E-31 227.2 34.4 335 78-453 26-379 (380)
138 cd06451 AGAT_like Alanine-glyo 100.0 2.8E-26 6E-31 225.1 34.4 290 124-448 31-355 (356)
139 PRK07366 succinyldiaminopimela 100.0 2.4E-26 5.3E-31 227.9 34.2 339 78-447 28-387 (388)
140 COG0520 csdA Selenocysteine ly 100.0 3.9E-26 8.3E-31 223.7 35.0 334 81-449 24-404 (405)
141 PRK01533 histidinol-phosphate 100.0 9.8E-27 2.1E-31 228.0 30.9 320 78-453 27-358 (366)
142 PRK09276 LL-diaminopimelate am 100.0 3.4E-26 7.3E-31 226.8 35.0 334 79-446 30-384 (385)
143 PRK08068 transaminase; Reviewe 100.0 3.3E-26 7.2E-31 227.0 34.7 334 79-446 31-385 (389)
144 PRK00950 histidinol-phosphate 100.0 2.3E-26 5E-31 226.1 33.2 317 78-448 32-360 (361)
145 PRK07324 transaminase; Validat 100.0 3.2E-26 6.9E-31 225.4 33.9 330 78-451 24-371 (373)
146 PRK12414 putative aminotransfe 100.0 4.3E-26 9.3E-31 225.6 34.9 337 79-446 28-383 (384)
147 TIGR01979 sufS cysteine desulf 100.0 5.3E-26 1.1E-30 226.9 35.9 336 81-451 20-402 (403)
148 COG0079 HisC Histidinol-phosph 100.0 5.7E-26 1.2E-30 219.0 34.7 319 81-450 23-354 (356)
149 PRK05957 aspartate aminotransf 100.0 6.9E-26 1.5E-30 224.5 35.9 340 81-452 28-387 (389)
150 PRK09148 aminotransferase; Val 100.0 5.1E-26 1.1E-30 226.4 35.0 349 78-453 28-393 (405)
151 TIGR01141 hisC histidinol-phos 100.0 2.9E-26 6.2E-31 224.1 32.3 316 80-445 19-346 (346)
152 PRK08912 hypothetical protein; 100.0 7.3E-26 1.6E-30 224.4 35.1 337 80-449 26-385 (387)
153 PRK06348 aspartate aminotransf 100.0 7.9E-26 1.7E-30 223.8 35.2 333 81-447 30-382 (384)
154 PLN02855 Bifunctional selenocy 100.0 7.5E-26 1.6E-30 226.9 35.0 338 80-452 33-420 (424)
155 PRK02948 cysteine desulfurase; 100.0 3.5E-26 7.6E-31 226.4 32.0 325 96-453 13-377 (381)
156 PRK07777 aminotransferase; Val 100.0 8.7E-26 1.9E-30 223.9 34.9 337 80-448 24-384 (387)
157 PRK07309 aromatic amino acid a 100.0 1.9E-25 4E-30 221.6 36.8 341 80-452 30-390 (391)
158 PRK13520 L-tyrosine decarboxyl 100.0 5.8E-26 1.3E-30 224.2 33.0 316 95-449 32-370 (371)
159 PRK10534 L-threonine aldolase; 100.0 1.1E-26 2.3E-31 225.8 27.1 320 82-449 1-332 (333)
160 cd00378 SHMT Serine-glycine hy 100.0 3.6E-26 7.9E-31 228.0 31.5 339 80-452 19-387 (402)
161 PRK08361 aspartate aminotransf 100.0 9.9E-26 2.2E-30 223.7 33.8 336 80-450 33-390 (391)
162 cd06453 SufS_like Cysteine des 100.0 7.7E-26 1.7E-30 223.4 32.8 318 96-444 12-373 (373)
163 PRK00011 glyA serine hydroxyme 100.0 9.2E-26 2E-30 225.9 33.5 339 80-450 25-389 (416)
164 PRK05942 aspartate aminotransf 100.0 1.8E-25 4E-30 222.0 35.3 334 79-446 34-388 (394)
165 PRK08960 hypothetical protein; 100.0 2E-25 4.3E-30 221.3 35.4 333 79-448 31-385 (387)
166 PLN03026 histidinol-phosphate 100.0 1.8E-25 3.8E-30 220.6 34.5 319 79-447 51-379 (380)
167 PRK05387 histidinol-phosphate 100.0 2.7E-25 5.8E-30 217.9 34.5 319 79-449 23-352 (353)
168 PRK08175 aminotransferase; Val 100.0 3.6E-25 7.9E-30 219.9 35.4 345 79-451 28-390 (395)
169 COG1167 ARO8 Transcriptional r 100.0 4.1E-25 8.9E-30 221.6 35.8 350 80-452 89-457 (459)
170 cd00613 GDC-P Glycine cleavage 100.0 3.8E-26 8.3E-31 227.6 28.3 326 81-444 21-398 (398)
171 PRK09147 succinyldiaminopimela 100.0 3.2E-25 7E-30 220.4 34.7 337 78-448 27-394 (396)
172 PRK08636 aspartate aminotransf 100.0 6.6E-25 1.4E-29 218.5 36.9 347 78-452 31-402 (403)
173 PRK14807 histidinol-phosphate 100.0 5E-25 1.1E-29 215.4 35.4 317 82-448 24-350 (351)
174 cd00609 AAT_like Aspartate ami 100.0 3.2E-25 6.8E-30 216.9 33.6 333 84-445 2-349 (350)
175 COG1104 NifS Cysteine sulfinat 100.0 2.2E-25 4.7E-30 210.4 30.8 335 82-453 4-380 (386)
176 TIGR01264 tyr_amTase_E tyrosin 100.0 3E-25 6.5E-30 221.0 33.5 338 79-451 30-400 (401)
177 TIGR01977 am_tr_V_EF2568 cyste 100.0 2.3E-25 5E-30 220.3 32.4 320 95-446 12-375 (376)
178 PTZ00377 alanine aminotransfer 100.0 1E-24 2.3E-29 221.5 37.7 342 97-453 91-478 (481)
179 PRK07550 hypothetical protein; 100.0 7.8E-25 1.7E-29 217.0 35.8 336 79-447 28-384 (386)
180 PLN00145 tyrosine/nicotianamin 100.0 9.1E-25 2E-29 218.5 36.3 346 79-454 51-428 (430)
181 PRK07865 N-succinyldiaminopime 100.0 3.3E-25 7.2E-30 217.9 32.4 325 78-445 25-363 (364)
182 TIGR03539 DapC_actino succinyl 99.9 4.3E-25 9.4E-30 216.4 32.9 324 78-444 19-356 (357)
183 PRK07683 aminotransferase A; V 99.9 1E-24 2.3E-29 215.9 35.8 336 80-450 28-383 (387)
184 TIGR03812 tyr_de_CO2_Arch tyro 99.9 5.9E-25 1.3E-29 217.1 34.0 325 79-446 22-372 (373)
185 PRK15481 transcriptional regul 99.9 2.9E-25 6.3E-30 223.1 32.1 327 80-449 85-430 (431)
186 PTZ00433 tyrosine aminotransfe 99.9 1.4E-24 3E-29 216.7 36.5 345 78-452 31-410 (412)
187 PRK03321 putative aminotransfe 99.9 4.3E-25 9.3E-30 216.2 32.0 316 81-449 23-350 (352)
188 PRK06107 aspartate aminotransf 99.9 1.2E-24 2.6E-29 216.6 35.7 344 79-451 32-401 (402)
189 PRK08363 alanine aminotransfer 99.9 1.4E-24 3E-29 216.1 35.9 340 78-451 28-395 (398)
190 PRK04870 histidinol-phosphate 99.9 4.3E-25 9.3E-30 216.5 31.8 320 79-447 25-355 (356)
191 TIGR03402 FeS_nifS cysteine de 99.9 5.3E-25 1.2E-29 217.8 32.6 333 82-452 2-374 (379)
192 PLN02187 rooty/superroot1 99.9 8.7E-25 1.9E-29 220.1 34.5 345 78-454 64-442 (462)
193 KOG0257|consensus 99.9 4.8E-26 1E-30 212.5 23.1 332 91-445 41-414 (420)
194 TIGR01814 kynureninase kynuren 99.9 9E-25 2E-29 217.8 33.7 329 81-448 27-405 (406)
195 TIGR02006 IscS cysteine desulf 99.9 9.7E-25 2.1E-29 217.3 32.6 336 80-452 4-379 (402)
196 PRK13355 bifunctional HTH-doma 99.9 8.2E-25 1.8E-29 224.0 32.6 339 78-452 144-516 (517)
197 PLN02656 tyrosine transaminase 99.9 3.3E-24 7.1E-29 213.7 35.9 344 78-451 29-404 (409)
198 TIGR03538 DapC_gpp succinyldia 99.9 2E-24 4.4E-29 214.5 34.2 336 78-447 26-392 (393)
199 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 3E-24 6.5E-29 210.6 35.0 291 124-447 30-354 (355)
200 PRK07568 aspartate aminotransf 99.9 2.7E-24 5.9E-29 214.1 34.8 336 79-452 29-394 (397)
201 PTZ00094 serine hydroxymethylt 99.9 5E-25 1.1E-29 221.7 29.7 338 80-450 34-408 (452)
202 PRK09105 putative aminotransfe 99.9 2.3E-24 5E-29 211.7 33.7 314 80-448 43-368 (370)
203 TIGR01265 tyr_nico_aTase tyros 99.9 3.4E-24 7.3E-29 213.5 35.0 338 79-450 30-401 (403)
204 cd00614 CGS_like CGS_like: Cys 99.9 3.4E-25 7.5E-30 217.5 27.3 290 123-448 38-368 (369)
205 PRK14809 histidinol-phosphate 99.9 3.5E-24 7.7E-29 210.1 34.3 318 78-449 28-356 (357)
206 PRK09265 aminotransferase AlaT 99.9 3.4E-24 7.3E-29 213.6 34.7 341 78-452 31-403 (404)
207 PRK05664 threonine-phosphate d 99.9 2.2E-24 4.7E-29 209.0 32.0 303 80-451 20-329 (330)
208 PRK06855 aminotransferase; Val 99.9 5.3E-24 1.1E-28 213.5 35.6 348 79-451 31-430 (433)
209 PRK05166 histidinol-phosphate 99.9 5.2E-24 1.1E-28 209.8 34.7 322 79-448 35-369 (371)
210 PRK07337 aminotransferase; Val 99.9 6.1E-24 1.3E-28 210.8 35.4 338 79-448 29-387 (388)
211 COG1168 MalY Bifunctional PLP- 99.9 1E-23 2.2E-28 195.1 33.7 329 92-451 36-387 (388)
212 PRK06425 histidinol-phosphate 99.9 2.2E-24 4.8E-29 209.1 30.9 283 126-448 41-331 (332)
213 PRK08056 threonine-phosphate d 99.9 6.3E-24 1.4E-28 208.1 34.2 322 78-449 18-354 (356)
214 TIGR02326 transamin_PhnW 2-ami 99.9 8.3E-24 1.8E-28 208.0 35.2 290 124-448 34-360 (363)
215 PRK02610 histidinol-phosphate 99.9 8.8E-24 1.9E-28 208.4 35.2 324 80-451 28-372 (374)
216 TIGR03403 nifS_epsilon cystein 99.9 7.3E-24 1.6E-28 209.8 34.7 323 96-452 12-377 (382)
217 PRK07590 L,L-diaminopimelate a 99.9 3.9E-24 8.5E-29 213.4 32.2 338 79-447 33-408 (409)
218 TIGR01437 selA_rel uncharacter 99.9 8.1E-24 1.8E-28 206.9 33.6 319 80-447 8-362 (363)
219 PRK14808 histidinol-phosphate 99.9 2.6E-24 5.7E-29 208.6 29.7 310 77-447 16-334 (335)
220 PLN00143 tyrosine/nicotianamin 99.9 1.6E-23 3.5E-28 208.7 36.2 346 77-452 29-406 (409)
221 PRK06234 methionine gamma-lyas 99.9 3E-24 6.6E-29 212.4 30.5 293 124-446 63-397 (400)
222 PLN02672 methionine S-methyltr 99.9 1.4E-23 3E-28 223.0 36.2 344 78-450 695-1080(1082)
223 PRK06358 threonine-phosphate d 99.9 2.7E-23 5.8E-28 203.3 35.0 320 80-448 19-353 (354)
224 PRK06959 putative threonine-ph 99.9 1.1E-23 2.4E-28 204.5 31.8 302 80-452 24-335 (339)
225 PRK06767 methionine gamma-lyas 99.9 4E-24 8.7E-29 210.8 28.9 287 124-448 60-383 (386)
226 PRK05839 hypothetical protein; 99.9 1.7E-23 3.6E-28 206.3 32.8 329 79-449 23-373 (374)
227 PF00266 Aminotran_5: Aminotra 99.9 3.4E-23 7.4E-28 204.2 34.7 314 96-440 12-371 (371)
228 PRK13238 tnaA tryptophanase/L- 99.9 4E-23 8.7E-28 206.7 35.4 351 78-450 34-433 (460)
229 PLN02242 methionine gamma-lyas 99.9 9.2E-24 2E-28 209.2 30.4 244 123-401 74-347 (418)
230 PRK06836 aspartate aminotransf 99.9 6.4E-23 1.4E-27 203.7 36.6 329 80-451 33-392 (394)
231 PRK01688 histidinol-phosphate 99.9 5.1E-24 1.1E-28 208.1 28.3 278 127-445 59-351 (351)
232 PRK13479 2-aminoethylphosphona 99.9 5E-23 1.1E-27 202.9 35.4 296 124-452 36-365 (368)
233 PLN02409 serine--glyoxylate am 99.9 4.6E-23 1E-27 204.7 35.1 298 123-452 40-374 (401)
234 PRK04781 histidinol-phosphate 99.9 2.2E-23 4.9E-28 204.5 31.7 284 127-449 61-362 (364)
235 TIGR01324 cysta_beta_ly_B cyst 99.9 2E-23 4.3E-28 204.2 29.9 290 124-448 49-374 (377)
236 cd00616 AHBA_syn 3-amino-5-hyd 99.9 3.9E-23 8.4E-28 202.6 32.1 288 123-445 16-352 (352)
237 PRK07392 threonine-phosphate d 99.9 1E-22 2.2E-27 199.9 34.8 324 80-449 22-358 (360)
238 TIGR01328 met_gam_lyase methio 99.9 2.7E-23 5.9E-28 204.8 30.3 292 124-449 58-389 (391)
239 PRK04635 histidinol-phosphate 99.9 3.8E-23 8.2E-28 202.4 31.1 276 127-446 62-351 (354)
240 PRK05968 hypothetical protein; 99.9 1.6E-23 3.5E-28 206.5 28.4 289 123-447 61-387 (389)
241 PRK07908 hypothetical protein; 99.9 5.7E-23 1.2E-27 200.9 32.1 317 79-449 21-346 (349)
242 TIGR01140 L_thr_O3P_dcar L-thr 99.9 5.5E-23 1.2E-27 199.2 31.6 274 127-445 49-330 (330)
243 PRK08249 cystathionine gamma-s 99.9 3.2E-23 6.9E-28 204.4 30.1 212 123-360 62-281 (398)
244 PRK14012 cysteine desulfurase; 99.9 6.6E-23 1.4E-27 204.3 32.6 334 81-452 5-381 (404)
245 PRK08354 putative aminotransfe 99.9 1.9E-22 4.2E-27 193.7 34.3 295 80-447 8-309 (311)
246 TIGR03542 DAPAT_plant LL-diami 99.9 1E-22 2.2E-27 202.8 32.7 336 79-447 32-401 (402)
247 PLN02651 cysteine desulfurase 99.9 5E-23 1.1E-27 202.4 29.4 311 96-438 12-364 (364)
248 PLN02376 1-aminocyclopropane-1 99.9 8.3E-23 1.8E-27 206.8 31.4 312 121-450 94-438 (496)
249 PLN02450 1-aminocyclopropane-1 99.9 8.3E-23 1.8E-27 206.1 31.2 314 121-452 86-432 (468)
250 PLN02231 alanine transaminase 99.9 5.3E-22 1.1E-26 202.1 37.2 342 97-453 143-530 (534)
251 PTZ00376 aspartate aminotransf 99.9 5.5E-23 1.2E-27 204.7 29.4 336 79-450 28-403 (404)
252 cd06450 DOPA_deC_like DOPA dec 99.9 4.1E-23 8.8E-28 201.8 27.1 281 122-446 35-344 (345)
253 PRK08133 O-succinylhomoserine 99.9 1.5E-22 3.3E-27 199.6 31.2 211 123-359 59-277 (390)
254 PLN02607 1-aminocyclopropane-1 99.9 2.1E-22 4.6E-27 201.6 31.8 313 121-452 95-439 (447)
255 TIGR01325 O_suc_HS_sulf O-succ 99.9 1.2E-22 2.5E-27 200.0 29.4 245 124-401 53-319 (380)
256 PRK03967 histidinol-phosphate 99.9 4.8E-22 1E-26 193.1 32.6 309 78-450 16-334 (337)
257 PRK08574 cystathionine gamma-s 99.9 7.6E-23 1.6E-27 201.1 27.1 212 123-360 51-270 (385)
258 COG2008 GLY1 Threonine aldolas 99.9 6.9E-23 1.5E-27 189.3 24.1 326 83-448 2-341 (342)
259 PRK07503 methionine gamma-lyas 99.9 1.6E-22 3.4E-27 200.2 28.2 212 124-359 64-283 (403)
260 PRK07504 O-succinylhomoserine 99.9 2.3E-22 5E-27 198.7 29.0 211 124-360 64-283 (398)
261 PRK06460 hypothetical protein; 99.9 4.9E-22 1.1E-26 195.0 30.6 292 123-450 43-374 (376)
262 PRK07810 O-succinylhomoserine 99.9 5.2E-22 1.1E-26 196.2 30.3 233 124-382 69-324 (403)
263 PRK08247 cystathionine gamma-s 99.9 3.9E-22 8.5E-27 195.4 29.0 230 123-382 50-289 (366)
264 PRK09440 avtA valine--pyruvate 99.9 1.5E-21 3.2E-26 195.5 32.9 345 81-454 31-415 (416)
265 PRK07811 cystathionine gamma-s 99.9 7.4E-22 1.6E-26 194.6 29.7 211 124-360 60-279 (388)
266 PRK08114 cystathionine beta-ly 99.9 8.5E-22 1.8E-26 192.0 28.9 234 123-382 60-317 (395)
267 PRK08861 cystathionine gamma-s 99.9 1.3E-21 2.8E-26 191.6 30.3 247 123-401 51-320 (388)
268 KOG1368|consensus 99.9 1.8E-22 4E-27 179.4 21.6 333 81-451 22-370 (384)
269 PRK04366 glycine dehydrogenase 99.9 1.9E-21 4.1E-26 196.8 32.0 339 85-454 72-452 (481)
270 TIGR03235 DNA_S_dndA cysteine 99.9 1E-21 2.2E-26 192.5 29.1 299 96-429 11-339 (353)
271 PRK09028 cystathionine beta-ly 99.9 1E-21 2.2E-26 192.1 28.9 291 124-445 60-386 (394)
272 COG0399 WecE Predicted pyridox 99.9 5.4E-21 1.2E-25 182.5 32.4 309 97-449 15-372 (374)
273 PLN02397 aspartate transaminas 99.9 2.1E-21 4.6E-26 194.0 30.6 334 79-449 47-420 (423)
274 cd00617 Tnase_like Tryptophana 99.9 6.3E-21 1.4E-25 188.3 33.3 344 79-451 19-409 (431)
275 PLN02509 cystathionine beta-ly 99.9 1.7E-21 3.6E-26 193.9 29.1 288 124-449 132-460 (464)
276 PRK08776 cystathionine gamma-s 99.9 5.5E-21 1.2E-25 188.9 32.3 293 123-447 58-391 (405)
277 PRK07050 cystathionine beta-ly 99.9 2.2E-21 4.7E-26 191.3 28.4 295 123-447 63-392 (394)
278 PRK09257 aromatic amino acid a 99.9 1.4E-21 3.1E-26 194.3 27.3 327 81-447 27-395 (396)
279 TIGR01329 cysta_beta_ly_E cyst 99.9 2.1E-21 4.5E-26 190.8 28.1 289 124-450 46-375 (378)
280 PRK07049 methionine gamma-lyas 99.9 3.6E-21 7.8E-26 191.5 29.7 295 124-449 82-425 (427)
281 PF01041 DegT_DnrJ_EryC1: DegT 99.9 1.2E-20 2.6E-25 185.1 32.8 308 97-445 5-363 (363)
282 TIGR02379 ECA_wecE TDP-4-keto- 99.9 2.3E-20 5E-25 183.1 34.4 312 97-448 11-375 (376)
283 TIGR03588 PseC UDP-4-keto-6-de 99.9 1.1E-20 2.4E-25 186.8 32.4 316 97-448 10-380 (380)
284 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 2E-20 4.3E-25 184.3 33.8 312 97-448 11-374 (375)
285 PRK06084 O-acetylhomoserine am 99.9 3.2E-21 6.9E-26 191.5 28.0 293 124-450 57-422 (425)
286 PRK08045 cystathionine gamma-s 99.9 9.6E-21 2.1E-25 186.1 31.1 292 123-446 50-382 (386)
287 PRK08064 cystathionine beta-ly 99.9 4.7E-21 1E-25 189.0 28.9 288 123-447 52-383 (390)
288 PRK07812 O-acetylhomoserine am 99.9 6.9E-21 1.5E-25 189.0 30.1 294 123-451 67-432 (436)
289 PRK05939 hypothetical protein; 99.9 6.7E-21 1.4E-25 187.7 29.4 247 123-401 45-333 (397)
290 PRK05967 cystathionine beta-ly 99.9 8.5E-21 1.8E-25 185.3 29.0 295 123-445 62-390 (395)
291 TIGR02080 O_succ_thio_ly O-suc 99.9 1.1E-20 2.3E-25 185.7 29.0 291 123-449 49-380 (382)
292 PRK11658 UDP-4-amino-4-deoxy-L 99.9 3.8E-20 8.2E-25 182.4 32.8 312 97-448 14-377 (379)
293 PRK09275 aspartate aminotransf 99.9 1.1E-20 2.4E-25 189.9 29.2 339 80-453 100-520 (527)
294 PRK08637 hypothetical protein; 99.9 4.6E-20 9.9E-25 182.8 33.2 328 97-451 19-387 (388)
295 TIGR01788 Glu-decarb-GAD gluta 99.9 5.8E-20 1.3E-24 181.9 33.4 329 95-451 53-430 (431)
296 PRK05994 O-acetylhomoserine am 99.9 1E-20 2.2E-25 188.4 28.0 214 124-361 62-314 (427)
297 PRK07269 cystathionine gamma-s 99.9 9.2E-21 2E-25 184.8 26.7 229 124-382 53-289 (364)
298 PRK00451 glycine dehydrogenase 99.9 2.5E-20 5.3E-25 188.4 30.8 290 120-448 107-446 (447)
299 PRK06702 O-acetylhomoserine am 99.9 2.1E-20 4.6E-25 184.4 28.8 295 124-453 60-427 (432)
300 COG0075 Serine-pyruvate aminot 99.9 2.4E-19 5.2E-24 170.9 34.6 296 124-453 37-366 (383)
301 PRK08248 O-acetylhomoserine am 99.9 2.3E-20 5E-25 185.5 27.9 293 123-450 62-427 (431)
302 KOG0259|consensus 99.9 2E-19 4.4E-24 165.4 31.5 335 80-452 61-435 (447)
303 PRK06176 cystathionine gamma-s 99.9 5.4E-20 1.2E-24 180.6 29.4 210 123-359 48-266 (380)
304 PRK07671 cystathionine beta-ly 99.9 4.8E-20 1.1E-24 180.9 28.9 211 123-360 48-267 (377)
305 COG0626 MetC Cystathionine bet 99.9 6.7E-20 1.5E-24 176.0 29.0 292 123-449 61-393 (396)
306 TIGR03801 asp_4_decarbox aspar 99.9 5.8E-20 1.3E-24 184.5 29.9 338 80-452 94-518 (521)
307 PLN02368 alanine transaminase 99.9 3.8E-20 8.1E-25 183.0 28.0 252 121-383 107-398 (407)
308 COG1103 Archaea-specific pyrid 99.9 8.1E-20 1.8E-24 160.5 26.7 328 98-450 28-380 (382)
309 PRK07582 cystathionine gamma-l 99.9 6.9E-20 1.5E-24 179.3 29.5 283 124-446 50-365 (366)
310 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 4.6E-20 1E-24 183.7 28.6 213 123-360 55-306 (418)
311 PF01053 Cys_Met_Meta_PP: Cys/ 99.9 9.2E-20 2E-24 177.5 29.6 290 123-448 53-385 (386)
312 PRK08134 O-acetylhomoserine am 99.9 6.8E-20 1.5E-24 182.1 29.2 248 123-401 62-364 (433)
313 PRK02769 histidine decarboxyla 99.9 2.8E-19 6E-24 174.7 33.0 289 122-451 62-373 (380)
314 PRK15407 lipopolysaccharide bi 99.9 4.9E-19 1.1E-23 176.6 34.7 292 125-449 63-435 (438)
315 PRK05613 O-acetylhomoserine am 99.9 1.6E-19 3.5E-24 179.3 28.9 292 123-449 67-435 (437)
316 KOG1405|consensus 99.9 3E-20 6.6E-25 168.9 20.1 349 67-450 62-483 (484)
317 PLN02414 glycine dehydrogenase 99.9 1.4E-19 3E-24 192.4 28.5 306 120-453 563-910 (993)
318 COG2873 MET17 O-acetylhomoseri 99.9 4.2E-19 9.1E-24 163.3 27.3 299 113-449 53-424 (426)
319 PLN02271 serine hydroxymethylt 99.9 5.6E-19 1.2E-23 174.5 29.6 324 96-449 161-539 (586)
320 KOG0634|consensus 99.9 1.9E-18 4E-23 161.8 30.6 306 143-452 127-468 (472)
321 COG0112 GlyA Glycine/serine hy 99.9 1.2E-18 2.5E-23 162.2 28.3 339 81-451 27-391 (413)
322 PRK03080 phosphoserine aminotr 99.9 6.9E-19 1.5E-23 173.4 28.7 291 124-454 47-377 (378)
323 PLN03032 serine decarboxylase; 99.8 2.4E-18 5.1E-23 166.9 31.3 310 97-446 37-372 (374)
324 PLN02724 Molybdenum cofactor s 99.8 2.2E-18 4.7E-23 184.5 33.3 352 79-448 34-486 (805)
325 cd00615 Orn_deC_like Ornithine 99.8 1.5E-19 3.2E-24 172.2 20.3 219 123-357 57-293 (294)
326 PRK06434 cystathionine gamma-l 99.8 2.2E-18 4.8E-23 168.3 26.0 243 123-401 62-321 (384)
327 TIGR00474 selA seryl-tRNA(sec) 99.8 1.1E-17 2.4E-22 166.2 29.8 313 96-444 94-453 (454)
328 PRK15029 arginine decarboxylas 99.8 1.1E-17 2.5E-22 173.4 30.0 311 124-449 204-603 (755)
329 KOG1549|consensus 99.8 6.7E-18 1.5E-22 160.3 26.0 337 81-452 45-420 (428)
330 PF00464 SHMT: Serine hydroxym 99.8 7.6E-18 1.6E-22 162.6 26.2 319 96-444 33-399 (399)
331 cd00611 PSAT_like Phosphoserin 99.8 5.3E-18 1.2E-22 165.8 25.3 307 96-447 11-353 (355)
332 TIGR03531 selenium_SpcS O-phos 99.8 2E-17 4.4E-22 163.0 29.3 305 124-447 104-443 (444)
333 PRK04311 selenocysteine syntha 99.8 2.7E-17 5.9E-22 163.9 30.4 318 96-449 99-463 (464)
334 KOG0256|consensus 99.8 2.3E-17 5.1E-22 153.3 27.6 299 140-454 146-465 (471)
335 TIGR01364 serC_1 phosphoserine 99.8 2.6E-17 5.6E-22 159.8 28.9 308 97-449 5-347 (349)
336 PLN02880 tyrosine decarboxylas 99.8 4.1E-17 8.9E-22 164.6 31.1 310 123-452 120-486 (490)
337 PLN02590 probable tyrosine dec 99.8 1.3E-16 2.7E-21 161.1 34.2 310 123-453 168-535 (539)
338 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 5.7E-18 1.2E-22 164.1 23.4 289 122-435 63-416 (417)
339 TIGR01366 serC_3 phosphoserine 99.8 7.8E-18 1.7E-22 164.6 24.2 287 124-451 40-361 (361)
340 KOG0053|consensus 99.8 4E-17 8.7E-22 154.8 27.0 210 124-359 76-294 (409)
341 PRK05367 glycine dehydrogenase 99.8 3.8E-17 8.3E-22 174.8 28.5 304 120-453 537-878 (954)
342 TIGR02618 tyr_phenol_ly tyrosi 99.8 1.5E-16 3.2E-21 154.8 29.4 311 123-451 69-427 (450)
343 PRK13237 tyrosine phenol-lyase 99.8 2E-16 4.2E-21 154.4 30.2 309 124-451 77-434 (460)
344 PRK05355 3-phosphoserine/phosp 99.8 7.5E-17 1.6E-21 157.4 27.2 306 96-449 15-357 (360)
345 PLN02263 serine decarboxylase 99.8 6.2E-16 1.4E-20 152.2 33.5 288 123-450 131-443 (470)
346 TIGR03799 NOD_PanD_pyr putativ 99.8 5.8E-16 1.2E-20 156.6 34.2 288 143-443 162-518 (522)
347 PRK12566 glycine dehydrogenase 99.8 1.3E-16 2.7E-21 166.9 27.6 306 119-452 537-878 (954)
348 TIGR00461 gcvP glycine dehydro 99.8 3.1E-16 6.8E-21 165.0 30.4 305 119-453 524-870 (939)
349 PRK15400 lysine decarboxylase 99.8 2.7E-16 5.8E-21 161.5 28.4 305 123-449 193-558 (714)
350 PRK13578 ornithine decarboxyla 99.8 4.2E-16 9.1E-21 160.1 29.0 308 123-449 172-564 (720)
351 PRK15399 lysine decarboxylase 99.7 1.7E-15 3.7E-20 155.6 30.4 303 124-449 194-558 (713)
352 KOG0633|consensus 99.7 1.7E-15 3.8E-20 132.7 20.7 285 129-447 73-374 (375)
353 cd01494 AAT_I Aspartate aminot 99.7 3.3E-16 7.2E-21 136.4 16.4 160 127-299 2-169 (170)
354 PF01212 Beta_elim_lyase: Beta 99.7 5E-17 1.1E-21 152.6 11.6 259 84-371 1-278 (290)
355 KOG2862|consensus 99.7 7.7E-14 1.7E-18 125.6 30.5 290 127-451 52-383 (385)
356 PLN02414 glycine dehydrogenase 99.7 7.2E-15 1.6E-19 156.8 27.6 320 79-446 101-465 (993)
357 COG3844 Kynureninase [Amino ac 99.7 2.6E-14 5.6E-19 129.5 25.3 323 91-452 40-404 (407)
358 COG3977 Alanine-alpha-ketoisov 99.7 9.5E-14 2.1E-18 124.3 26.2 340 82-454 32-415 (417)
359 TIGR01365 serC_2 phosphoserine 99.7 7.6E-14 1.7E-18 135.6 27.8 288 124-450 38-373 (374)
360 COG0076 GadB Glutamate decarbo 99.7 7.6E-14 1.6E-18 138.8 27.3 291 96-410 75-403 (460)
361 PLN02452 phosphoserine transam 99.6 2E-13 4.4E-18 132.6 27.9 321 81-450 7-363 (365)
362 PRK05367 glycine dehydrogenase 99.6 1.1E-13 2.4E-18 148.4 28.3 280 118-445 114-437 (954)
363 TIGR02617 tnaA_trp_ase tryptop 99.6 1.2E-13 2.6E-18 133.3 25.5 345 80-451 41-442 (467)
364 COG1982 LdcC Arginine/lysine/o 99.6 1.3E-13 2.8E-18 136.3 24.4 287 124-445 69-403 (557)
365 PF00282 Pyridoxal_deC: Pyrido 99.6 3.7E-13 8E-18 131.6 24.2 245 124-381 78-373 (373)
366 COG1003 GcvP Glycine cleavage 99.6 9.4E-13 2E-17 124.0 23.3 306 120-454 104-451 (496)
367 PRK12462 phosphoserine aminotr 99.5 3.3E-11 7.2E-16 116.0 27.4 307 96-450 16-362 (364)
368 TIGR00461 gcvP glycine dehydro 99.5 2.4E-11 5.2E-16 128.5 26.2 313 82-445 65-426 (939)
369 TIGR03811 tyr_de_CO2_Ent tyros 99.5 3.5E-10 7.5E-15 115.9 33.6 323 122-452 120-604 (608)
370 PF12897 Aminotran_MocR: Alani 99.4 3.8E-10 8.2E-15 105.8 27.5 300 122-451 66-416 (425)
371 COG0403 GcvP Glycine cleavage 99.4 1.4E-10 3E-15 109.7 24.6 324 79-447 73-447 (450)
372 PF02347 GDC-P: Glycine cleava 99.4 4.5E-11 9.8E-16 116.2 21.4 281 117-444 102-429 (429)
373 KOG2467|consensus 99.4 1.2E-10 2.6E-15 107.4 22.7 325 96-450 53-426 (477)
374 KOG0258|consensus 99.3 1.5E-09 3.4E-14 101.0 25.9 336 97-451 89-470 (475)
375 COG1448 TyrB Aspartate/tyrosin 99.3 5.6E-10 1.2E-14 104.5 23.0 326 81-447 27-395 (396)
376 KOG1383|consensus 99.3 6.5E-10 1.4E-14 106.1 22.6 343 76-453 75-449 (491)
377 PF05889 SLA_LP_auto_ag: Solub 99.3 3.2E-09 7E-14 101.0 24.8 301 131-449 62-389 (389)
378 COG1921 SelA Selenocysteine sy 99.3 7.1E-10 1.5E-14 105.4 20.3 223 96-337 40-271 (395)
379 KOG0629|consensus 99.2 2.5E-09 5.5E-14 100.8 21.1 305 129-449 145-508 (510)
380 PF06838 Met_gamma_lyase: Meth 99.2 4.3E-08 9.3E-13 91.6 26.1 246 121-403 49-333 (403)
381 PRK12566 glycine dehydrogenase 99.1 2.4E-08 5.2E-13 105.5 24.9 310 80-445 78-439 (954)
382 KOG2040|consensus 99.1 8E-09 1.7E-13 101.9 19.0 303 121-452 578-920 (1001)
383 COG3033 TnaA Tryptophanase [Am 99.1 1.5E-07 3.3E-12 87.1 24.8 311 127-451 81-445 (471)
384 PF03841 SelA: L-seryl-tRNA se 99.0 7.4E-10 1.6E-14 104.4 7.8 242 96-358 19-295 (367)
385 KOG3846|consensus 98.9 6.4E-07 1.4E-11 81.3 23.0 337 77-453 63-464 (465)
386 COG1932 SerC Phosphoserine ami 98.8 2.5E-06 5.5E-11 80.0 22.8 309 96-450 17-363 (365)
387 COG4100 Cystathionine beta-lya 98.7 1.6E-06 3.4E-11 78.6 18.1 169 119-307 58-256 (416)
388 KOG0628|consensus 98.7 3.4E-05 7.5E-10 74.2 27.8 280 143-451 142-472 (511)
389 KOG1412|consensus 98.2 9.1E-05 2E-09 67.8 16.9 271 145-453 104-408 (410)
390 PF04864 Alliinase_C: Allinase 98.2 0.00013 2.8E-09 68.3 16.5 276 126-446 44-361 (363)
391 KOG2040|consensus 98.0 0.002 4.4E-08 64.7 21.2 312 84-445 121-478 (1001)
392 KOG3843|consensus 97.8 0.00083 1.8E-08 60.2 13.6 300 128-453 60-405 (432)
393 KOG1411|consensus 97.6 0.002 4.2E-08 60.2 13.2 259 148-448 128-423 (427)
394 PLN02994 1-aminocyclopropane-1 95.3 0.043 9.3E-07 46.5 5.9 55 121-175 92-152 (153)
395 KOG2790|consensus 95.3 2.4 5.2E-05 39.1 17.4 319 80-449 6-367 (370)
396 PRK13396 3-deoxy-7-phosphohept 78.8 36 0.00077 33.1 11.8 89 165-259 186-283 (352)
397 PRK13397 3-deoxy-7-phosphohept 73.1 78 0.0017 29.2 11.9 60 194-259 133-196 (250)
398 PRK12595 bifunctional 3-deoxy- 72.7 61 0.0013 31.8 11.8 81 173-259 213-299 (360)
399 smart00642 Aamy Alpha-amylase 69.2 11 0.00023 32.5 5.2 22 235-256 71-92 (166)
400 TIGR01361 DAHP_synth_Bsub phos 66.7 1E+02 0.0022 28.6 11.5 89 165-259 110-206 (260)
401 TIGR01732 tiny_TM_bacill conse 62.3 6.8 0.00015 21.8 1.6 12 14-25 7-18 (26)
402 cd01324 cbb3_Oxidase_CcoQ Cyto 57.8 13 0.00028 24.5 2.8 27 8-34 9-36 (48)
403 PF05368 NmrA: NmrA-like famil 57.0 96 0.0021 27.8 9.6 76 165-252 24-99 (233)
404 PF09680 Tiny_TM_bacill: Prote 56.7 8.7 0.00019 20.9 1.4 12 14-25 5-16 (24)
405 COG0108 RibB 3,4-dihydroxy-2-b 54.2 18 0.00038 31.8 3.8 36 216-252 155-190 (203)
406 COG1066 Sms Predicted ATP-depe 48.8 2.6E+02 0.0055 28.0 11.0 84 159-252 116-215 (456)
407 PRK03892 ribonuclease P protei 47.0 2.1E+02 0.0045 25.6 9.2 108 134-253 54-172 (216)
408 PF06153 DUF970: Protein of un 41.0 27 0.00058 27.6 2.6 53 392-452 12-68 (109)
409 KOG0630|consensus 39.0 1.5E+02 0.0033 30.0 7.8 54 195-254 275-330 (838)
410 PLN02672 methionine S-methyltr 38.9 4.3E+02 0.0094 30.2 12.3 115 128-255 429-565 (1082)
411 PRK13718 conjugal transfer pro 38.2 26 0.00057 25.4 2.0 31 9-39 51-81 (84)
412 PRK08535 translation initiatio 38.2 3.7E+02 0.0079 25.7 12.0 116 130-258 110-234 (310)
413 COG1911 RPL30 Ribosomal protei 37.3 67 0.0014 24.6 4.1 87 153-255 7-93 (100)
414 TIGR00511 ribulose_e2b2 ribose 35.7 3.9E+02 0.0085 25.4 11.8 116 130-258 105-229 (301)
415 COG0296 GlgB 1,4-alpha-glucan 35.2 40 0.00086 35.5 3.5 36 231-268 211-246 (628)
416 cd01455 vWA_F11C1-5a_type Von 35.1 1.5E+02 0.0033 26.1 6.6 52 197-252 95-147 (191)
417 COG3870 Uncharacterized protei 34.5 2.2E+02 0.0047 22.0 6.4 52 392-451 12-67 (109)
418 PF13872 AAA_34: P-loop contai 34.4 28 0.0006 32.9 2.1 25 235-259 160-185 (303)
419 PF06506 PrpR_N: Propionate ca 34.1 3E+02 0.0066 23.6 10.2 105 131-255 45-151 (176)
420 PRK00014 ribB 3,4-dihydroxy-2- 32.8 65 0.0014 29.1 4.1 34 218-252 173-206 (230)
421 PRK10785 maltodextrin glucosid 32.4 1.1E+02 0.0024 32.3 6.4 56 194-256 176-248 (598)
422 PRK00910 ribB 3,4-dihydroxy-2- 31.8 71 0.0015 28.7 4.1 34 218-252 169-202 (218)
423 COG4294 Uve UV damage repair e 31.6 4.6E+02 0.0099 24.9 10.4 95 140-256 136-239 (347)
424 PF01008 IF-2B: Initiation fac 30.5 4E+02 0.0086 24.8 9.4 115 130-257 97-221 (282)
425 PF14258 DUF4350: Domain of un 30.0 1.8E+02 0.0038 20.4 5.4 53 393-445 7-61 (70)
426 PF07905 PucR: Purine cataboli 29.5 2.1E+02 0.0046 22.9 6.3 47 195-252 57-104 (123)
427 PRK08673 3-deoxy-7-phosphohept 29.4 5.3E+02 0.012 25.0 11.5 81 173-259 188-274 (335)
428 PRK08335 translation initiatio 28.6 5E+02 0.011 24.4 12.5 112 128-252 97-216 (275)
429 PLN03059 beta-galactosidase; P 28.5 7.9E+02 0.017 27.2 11.8 39 216-254 176-223 (840)
430 TIGR02456 treS_nterm trehalose 28.0 1.5E+02 0.0032 31.0 6.4 56 194-256 25-98 (539)
431 COG1105 FruK Fructose-1-phosph 28.0 1.3E+02 0.0028 28.7 5.4 36 219-255 131-167 (310)
432 PRK09505 malS alpha-amylase; R 27.9 95 0.0021 33.3 5.0 21 236-256 294-314 (683)
433 PRK01792 ribB 3,4-dihydroxy-2- 27.4 92 0.002 27.9 4.1 34 218-252 168-201 (214)
434 PF03796 DnaB_C: DnaB-like hel 27.3 3.1E+02 0.0066 25.2 7.9 56 194-254 112-177 (259)
435 PF10678 DUF2492: Protein of u 26.5 1.3E+02 0.0029 22.1 4.0 47 126-172 21-68 (78)
436 PRK11633 cell division protein 26.5 2.5E+02 0.0053 25.5 6.7 52 392-447 162-213 (226)
437 TIGR00506 ribB 3,4-dihydroxy-2 26.4 1E+02 0.0022 27.3 4.2 34 218-252 158-191 (199)
438 TIGR00524 eIF-2B_rel eIF-2B al 26.2 5.8E+02 0.012 24.3 10.1 114 134-258 112-243 (303)
439 COG0352 ThiE Thiamine monophos 26.0 55 0.0012 29.3 2.5 19 236-254 54-72 (211)
440 PF00926 DHBP_synthase: 3,4-di 26.0 90 0.002 27.5 3.8 35 217-252 152-186 (194)
441 PF02603 Hpr_kinase_N: HPr Ser 25.9 74 0.0016 25.8 3.0 21 234-254 92-112 (127)
442 PRK13398 3-deoxy-7-phosphohept 25.8 5.5E+02 0.012 23.9 10.1 80 174-259 123-208 (266)
443 PF06877 RraB: Regulator of ri 25.6 2.6E+02 0.0056 21.5 6.0 59 392-453 37-97 (104)
444 cd00984 DnaB_C DnaB helicase C 24.8 1.9E+02 0.0042 26.0 6.0 53 194-252 106-168 (242)
445 TIGR02403 trehalose_treC alpha 24.6 1.9E+02 0.0042 30.1 6.5 54 195-255 25-96 (543)
446 PRK05234 mgsA methylglyoxal sy 24.5 4.1E+02 0.0089 22.0 7.7 40 216-255 74-114 (142)
447 KOG3974|consensus 24.2 93 0.002 28.7 3.5 49 194-254 90-139 (306)
448 TIGR03853 matur_matur probable 24.2 1.6E+02 0.0034 21.6 4.0 46 127-172 20-66 (77)
449 COG1707 ACT domain-containing 24.1 3.6E+02 0.0078 23.0 6.6 102 131-255 75-176 (218)
450 PF00128 Alpha-amylase: Alpha 23.5 42 0.00092 31.4 1.4 22 235-256 53-74 (316)
451 PF15183 MRAP: Melanocortin-2 22.9 77 0.0017 23.4 2.2 21 7-27 40-60 (90)
452 COG2870 RfaE ADP-heptose synth 22.8 1.6E+02 0.0035 29.1 5.0 34 219-254 145-178 (467)
453 PF05545 FixQ: Cbb3-type cytoc 22.5 80 0.0017 20.7 2.2 27 7-33 7-34 (49)
454 PRK00083 frr ribosome recyclin 22.5 5.2E+02 0.011 22.6 7.8 51 392-451 74-124 (185)
455 PRK10933 trehalose-6-phosphate 21.9 2.4E+02 0.0051 29.5 6.5 55 195-256 31-103 (551)
456 COG0616 SppA Periplasmic serin 21.9 1.4E+02 0.0031 28.6 4.6 59 195-260 81-144 (317)
457 PF11395 DUF2873: Protein of u 21.7 1.1E+02 0.0024 18.6 2.3 16 2-17 2-17 (43)
458 PRK09319 bifunctional 3,4-dihy 21.5 1.2E+02 0.0027 31.3 4.2 35 218-253 162-196 (555)
459 KOG1251|consensus 21.5 6.5E+02 0.014 23.3 9.3 65 140-204 73-140 (323)
460 TIGR00496 frr ribosome recycli 21.5 5.4E+02 0.012 22.3 7.8 51 392-451 65-115 (176)
461 PF13481 AAA_25: AAA domain; P 21.3 1.7E+02 0.0037 25.2 4.7 36 217-252 141-184 (193)
462 PRK02289 4-oxalocrotonate taut 21.2 2.7E+02 0.006 18.9 4.8 30 423-452 3-32 (60)
463 PF01972 SDH_sah: Serine dehyd 21.0 5E+02 0.011 24.3 7.6 28 7-34 3-32 (285)
464 PF04392 ABC_sub_bind: ABC tra 21.0 4.5E+02 0.0098 24.6 7.9 148 97-252 14-165 (294)
465 PRK09802 DNA-binding transcrip 20.5 6.9E+02 0.015 23.2 10.2 120 124-255 90-224 (269)
466 PLN00125 Succinyl-CoA ligase [ 20.5 2.1E+02 0.0045 27.2 5.3 36 217-255 94-129 (300)
467 COG1748 LYS9 Saccharopine dehy 20.2 8.6E+02 0.019 24.1 10.5 135 141-287 2-156 (389)
468 PF03851 UvdE: UV-endonuclease 20.1 72 0.0016 29.9 2.1 33 220-256 180-212 (275)
469 PF01972 SDH_sah: Serine dehyd 20.0 1.5E+02 0.0032 27.7 4.0 61 191-261 72-135 (285)
No 1
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=9.1e-65 Score=510.44 Aligned_cols=430 Identities=38% Similarity=0.660 Sum_probs=369.4
Q ss_pred HHHHHHHH---hhcccc--CCCChhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEECCeeeEEeecCCccC
Q psy15447 18 PLTLFIVL---SLSLSK--HKKHTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLS 92 (457)
Q Consensus 18 ~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~G~~~id~~s~~~l~ 92 (457)
+|++|+++ .++|+. .+.+++|+|+++++|+|+|++++.+...+ ..++++.+++|+++++||++|+||++++|++
T Consensus 43 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~~l~~~~~~~~~-~~~~~~~~~~G~~i~~~G~~~id~~s~~~lg 121 (481)
T PLN02822 43 LLIVVIVFLLSQKSYKPPKRPLTEKEIDELCDEWTPEPLIPPITEEMR-PEPPVLESAAGPHTIINGKDVVNFASANYLG 121 (481)
T ss_pred HHHHHHHHHHHcCcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCchhcc-ccCCceecCCCCeEEECCceEEEeECCCcCC
Confidence 34444444 444442 23479999999999999999998666544 3566899999999999999999999999999
Q ss_pred CCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCc
Q psy15447 93 FVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDEN 172 (457)
Q Consensus 93 ~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~ 172 (457)
+.+||++++++.+++++||+++|+++.+||+.+.+.+|+++|++++|.++++++++|+.++.+++++++++||.|+++..
T Consensus 122 l~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~~i~~s~G~~a~~sai~a~~~~gd~Ii~d~~ 201 (481)
T PLN02822 122 LIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPDSILYSYGLSTIFSVIPAFCKKGDIIVADEG 201 (481)
T ss_pred CCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHHHhCCCCCEEEEeCC
Confidence 99999999999999999999999999999999999999999999999998999999998999999999999999999999
Q ss_pred ccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEE
Q psy15447 173 INFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFV 252 (457)
Q Consensus 173 ~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~ 252 (457)
+|.++..++.+++.++++++|||+++++..+++...+.... +..+++|++|++++++|.+.|+++|+++|++||++||+
T Consensus 202 ~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~-~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIv 280 (481)
T PLN02822 202 VHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRK-KKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLL 280 (481)
T ss_pred ccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhccc-CCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEE
Confidence 99999999999999999999999999999887654321110 12347999999999999999999999999999999999
Q ss_pred EcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHH
Q psy15447 253 DESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKAL 332 (457)
Q Consensus 253 DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l 332 (457)
||+|++|.+|++|+|..+++++.+.++||+++||||++|+.|||++++++++++++....+++|+++.||+.+++++++|
T Consensus 281 DEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~GG~i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL 360 (481)
T PLN02822 281 DESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAI 360 (481)
T ss_pred ECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCCeEEEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHH
Confidence 99999999999999999999997667899999999999999999999999999998888889999888999999999999
Q ss_pred HHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHH-HcCeeEecc
Q psy15447 333 HLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCI-QAGFAITCP 410 (457)
Q Consensus 333 ~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~-~~Gi~v~~~ 410 (457)
+.+++.++++++++++++++++.|++ ..|+++..+..++++++.+++.... +.+.....+++++|+ ++||++.+.
T Consensus 361 ~~l~~~~~~~~~l~~~~~~l~~~L~~---~~g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~ 437 (481)
T PLN02822 361 DVLEDNPSVLAKLKENIALLHKGLSD---IPGLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVS 437 (481)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHh---cCCcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEee
Confidence 98876677899999999999999988 4577776667899999988642110 111224578999998 779999987
Q ss_pred ccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 411 SHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 411 ~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
.+|.......+..+|++++..+|++||++++++|++++..+-
T Consensus 438 ~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~~ 479 (481)
T PLN02822 438 KRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASVL 479 (481)
T ss_pred CCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHHh
Confidence 765432222346799999999999999999999999887654
No 2
>KOG1358|consensus
Probab=100.00 E-value=5.2e-65 Score=464.26 Aligned_cols=414 Identities=46% Similarity=0.785 Sum_probs=382.3
Q ss_pred ChhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCC
Q psy15447 35 HTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGS 114 (457)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~ 114 (457)
+++|+|+++++|.|+|++++.++.++..+++++++.-+.++++||++++||+|+||+++..++++++.+...+++||+|.
T Consensus 49 t~~eideLiedw~PEPLV~~~~~~~~~~~~~v~e~~~~~~~~i~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGs 128 (467)
T KOG1358|consen 49 TEQEIDELIEDWEPEPLVPPVPEDHPVLNTPVLESVMLPHVTIDGKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGS 128 (467)
T ss_pred CHHHHHHHHhcCCCCCCCCCCcccccccCCcccccccCCceEecCceeecccchhhhhhcccHHHHHHHHHHHHHhCCCC
Confidence 59999999999999999999998888888999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC
Q psy15447 115 CGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN 194 (457)
Q Consensus 115 ~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~ 194 (457)
||+|.|||+.+.|.+|+++||+++|.+.+++++.|+.++.++|++++++||+|++++..+.++..|+++++.++..|.||
T Consensus 129 CGPrGFYGt~DvHldlE~~iakF~G~E~aivYs~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn 208 (467)
T KOG1358|consen 129 CGPRGFYGTIDVHLDLEKRIAKFMGTEDAIVYSYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHN 208 (467)
T ss_pred cCCCcccccceeecccHHHHHHhhCCcceeeeccccchhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhhchhcccCCC--CccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcccccc
Q psy15447 195 NMQHLEELLRQQDERDTLNSK--VTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYF 272 (457)
Q Consensus 195 d~~~le~~l~~~~~~~~~~~~--~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~ 272 (457)
|++++|+.+.+...+++++|+ ..+++|++|+++.++|.++|+++|.++..||...+|+||.+++|.+|++|+|.++|+
T Consensus 209 dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~ 288 (467)
T KOG1358|consen 209 DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHF 288 (467)
T ss_pred CHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccC
Confidence 999999999887766666553 347899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHH
Q psy15447 273 GVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTM 352 (457)
Q Consensus 273 ~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l 352 (457)
++++.++|++++|+.-+++..||||+|+..++++++..+.+|+||.+.||+.+.++..++.+++.+++..+.++++...+
T Consensus 289 ~v~~~~iDiv~~sm~~alas~GgFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~ 368 (467)
T KOG1358|consen 289 GVPITDIDIVTASMETALASGGGFCAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKF 368 (467)
T ss_pred CCCccceeeeeecccccccccCceeecceeeEeeeeccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhhhcccccc
Confidence 99989999999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred HHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCcc-ccCCCCCeEEEEecC
Q psy15447 353 HSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCNI 430 (457)
Q Consensus 353 ~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-~~~~~~~~lRi~~~~ 430 (457)
++.|+. ..++.+.+++.+|++.+.+.....+ +.+....+++++.+..+|+++....+... +..+.++.+||+++.
T Consensus 369 H~~l~~---~s~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a 445 (467)
T KOG1358|consen 369 HAALSS---NSGFIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVSA 445 (467)
T ss_pred chhhhc---CCceEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEeC
Confidence 999987 5788999889999999998875433 45556778899999988999987765422 334456799999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHh
Q psy15447 431 SHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 431 ~~t~edi~~~~~~l~~~~~~~ 451 (457)
.++++|++++.+.|+++...+
T Consensus 446 ~~seeel~ra~~~ik~~~~~~ 466 (467)
T KOG1358|consen 446 GMSEEELERAAELIKEVASAV 466 (467)
T ss_pred CCCHHHHHHHHHHHHHHHHhh
Confidence 999999999999999887543
No 3
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=100.00 E-value=8e-64 Score=478.84 Aligned_cols=362 Identities=34% Similarity=0.594 Sum_probs=338.4
Q ss_pred eecCCCcEEEECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEe
Q psy15447 67 VDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALY 146 (457)
Q Consensus 67 i~~~~g~~~~~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~ 146 (457)
+.+..+..++.+|++++||+||+|||++.||++++++.+++++||.+.+++|..+|+.+.|.+||++||+|+|.+.+++|
T Consensus 26 ~~~~~~~~~~~~~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~al~f 105 (388)
T COG0156 26 LDRRQGLAIRADGRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEAALLF 105 (388)
T ss_pred ccccCCcceecCCceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEE
Confidence 44444667777899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447 147 SFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV 226 (457)
Q Consensus 147 ~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v 226 (457)
+||+.||..++.++++++|.|+.|+..|.++++++++++++++.|+|||+++||+.+++... .+. ++++|++|++
T Consensus 106 ~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~HnD~~~Le~~l~~~~~----~~~-~~~~IvtegV 180 (388)
T COG0156 106 SSGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKHNDLDHLEALLEEARE----NGA-RRKLIVTEGV 180 (388)
T ss_pred cccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecCCCHHHHHHHHHhhhc----cCC-CceEEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999987431 112 5789999999
Q ss_pred CCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHH
Q psy15447 227 YMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEH 306 (457)
Q Consensus 227 ~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~ 306 (457)
++|.|++.||++|+++|++||++|++||+|+.|++|++|+|+++++|+.+.++||+++||+|+||..|||++++..++++
T Consensus 181 fSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~Gg~v~g~~~~~d~ 260 (388)
T COG0156 181 FSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSGGYIAGSAALIDY 260 (388)
T ss_pred ccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccCceeeCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch
Q psy15447 307 HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE 386 (457)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 386 (457)
+++.+.++.|++++||..++++.++++++++.++++++++++..++++.++. .++.+ .+..++++++.++++.
T Consensus 261 L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~----~~~~~-~~s~s~I~pv~~gd~~-- 333 (388)
T COG0156 261 LRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKA----LGLVL-LPSESPIIPVILGDEE-- 333 (388)
T ss_pred HHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHh----cCCcc-CCCCCCeeeeEeCCHH--
Confidence 9999999999999999999999999999998889999999999999977766 56665 3678999999999876
Q ss_pred HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 387 VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 387 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
.+..+...|+++||++.+..+|.+ |.+..++|++++..||++||+++++++.++
T Consensus 334 -----~a~~~s~~l~~~Gi~v~~i~~PTV--p~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 334 -----RALEASRALLEEGIYVSAIRPPTV--PKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred -----HHHHHHHHHHHCCeeEeeecCCCC--CCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 788899999999999999999988 777899999999999999999999999865
No 4
>PLN02955 8-amino-7-oxononanoate synthase
Probab=100.00 E-value=1.1e-56 Score=438.94 Aligned_cols=347 Identities=22% Similarity=0.374 Sum_probs=319.0
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAI 157 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai 157 (457)
.+++++||+||+|||+..||++++++.+++++||.++++++.+.|+...+.+||++||+++|.+.+++++||+.||..++
T Consensus 100 ~~r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~all~sSGy~AN~~~i 179 (476)
T PLN02955 100 RFKKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKEDCLVCPTGFAANMAAM 179 (476)
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCCcEEEECChHHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhh--------------cCCCCEEEEeCcccHHHHHHHHhc----CCeEEEecCCCHHHHHHHHHhhchhcccCCCCccE
Q psy15447 158 AAY--------------VKRNDAVFVDENINFAIQTGLIAS----RCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKK 219 (457)
Q Consensus 158 ~a~--------------~~~gd~v~~~~~~h~~~~~~~~~~----g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~ 219 (457)
.++ .++++.|+.|...|.+++.+++++ ++++..|+|||+++|++++++.. ...+
T Consensus 180 ~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HND~~~Le~~L~~~~--------~~~~ 251 (476)
T PLN02955 180 VAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHCDMYHLNSLLSSCK--------MKRK 251 (476)
T ss_pred HHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCCCHHHHHHHHHhCC--------CCce
Confidence 887 357789999999999999999998 57889999999999999998754 3457
Q ss_pred EEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEe
Q psy15447 220 FIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVG 299 (457)
Q Consensus 220 ~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~ 299 (457)
+|++|+++++.|.+.|+++|+++|++||++||+||+|++|++|++|+|..+++|+. .++||+++||+|++|..|||+++
T Consensus 252 ~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~-~di~ii~~TLsKA~G~~GGfi~g 330 (476)
T PLN02955 252 VVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCE-ADVDLCVGTLSKAAGCHGGFIAC 330 (476)
T ss_pred EEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCC-CCCcEEEEeCccchhccCceeec
Confidence 99999999999999999999999999999999999999999999999999999997 57889999999999999999999
Q ss_pred cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEE
Q psy15447 300 SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLY 379 (457)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~ 379 (457)
++++++.++..+.++.|+++.||..+++++++++.+...++++++++++.++|++. .|+++ .+|++++.
T Consensus 331 s~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~-------~G~~~----~sPI~pI~ 399 (476)
T PLN02955 331 SKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKAL-------SGVDI----SSPIISLV 399 (476)
T ss_pred HHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh-------cCCCC----CCCEEEEE
Confidence 99999999998999999999999999999999999887777889999999999873 24332 48999999
Q ss_pred ecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 380 LQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
++++. .+..+.++|+++||++.+..||.+ |.+..++||+++..||++||++++++|.++.+....
T Consensus 400 ig~~~-------~a~~~~~~L~~~Gi~v~~i~yPtV--P~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~~~ 464 (476)
T PLN02955 400 VGNQE-------KALKASRYLLKSGFHVMAIRPPTV--PPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFDNT 464 (476)
T ss_pred eCCHH-------HHHHHHHHHHHCCCEEEEECCCCC--CCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence 98875 778899999999999999999987 777789999999999999999999999998776643
No 5
>KOG1359|consensus
Probab=100.00 E-value=7.2e-54 Score=377.16 Aligned_cols=362 Identities=30% Similarity=0.489 Sum_probs=334.8
Q ss_pred ceeeecCCCcEEEECC--eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC
Q psy15447 64 KYVVDQKSGYIVNING--IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE 141 (457)
Q Consensus 64 ~~~i~~~~g~~~~~~G--~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~ 141 (457)
-.++.+.+|.++.++| +++|||++|||+|++.||+|.+|..+++++||.+..+.++.-|+.+.|..||.++|++.+.|
T Consensus 49 erVi~s~q~p~i~v~G~~k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rE 128 (417)
T KOG1359|consen 49 ERVITSRQGPTIQVKGSDKKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGRE 128 (417)
T ss_pred eeEEeecccceEEEeccccceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCCC
Confidence 4688899999999877 79999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447 142 ETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFI 221 (457)
Q Consensus 142 ~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~v 221 (457)
+++++.+++.||..++.++..+.|.|+.|+..|.++.++++++. ++.|.|+-+++..+.+... .+.++|
T Consensus 129 D~ilypscfdANag~feail~pedAvfSDeLNhASIIdGirLck----ry~h~dv~~l~~~l~~a~k-------~r~klv 197 (417)
T KOG1359|consen 129 DTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCK----RYRHVDVFDLEHCLISACK-------MRLKLV 197 (417)
T ss_pred ceEEeccccccchHHHHHhcChhhhhhccccccchhhhhhHHHh----hhccchhHHHHHHHHHhhh-------heEEEE
Confidence 99999999999999999999999999999999999999999976 6677899999988876542 577899
Q ss_pred EEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-CcccEEEec
Q psy15447 222 IVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVGS 300 (457)
Q Consensus 222 i~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~ 300 (457)
++++++++.|.+.|+++|.+|++|||+++++||+|+.|.+|++|+|..+.+|+. .++||+.+|++|++| ..|||..++
T Consensus 198 ~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm-~~vdiinsTLgKAlGga~GGyttgp 276 (417)
T KOG1359|consen 198 VTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVM-GDVDIINSTLGKALGGASGGYTTGP 276 (417)
T ss_pred EecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCC-CcceehhhhhhhhhcCCCCCCccCC
Confidence 999999999999999999999999999999999999999999999999999986 689999999999997 578999999
Q ss_pred HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447 301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL 380 (457)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~ 380 (457)
+.+++.++..+.+|.|+.+.||.....+.++++.+-.......+.+.+.++|++.++. .|+.+.+ ...|+.++.+
T Consensus 277 ~~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~----aGftIsg-~~hPI~pv~l 351 (417)
T KOG1359|consen 277 KPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEA----AGFTISG-ASHPICPVML 351 (417)
T ss_pred hhHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh----cCceecC-CCCCccceec
Confidence 9999999999999999999999888888889888877667888999999999999988 8999864 3479999999
Q ss_pred cCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 381 QKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
++.. .+.++++.|+++||+|-...||.+ |+++.++|+.++..||+||||++++++.++.+..
T Consensus 352 Gda~-------lA~~~ad~lLk~Gi~Vigfs~PvV--P~gkariRVqiSAaHt~edid~~i~Af~~vgr~~ 413 (417)
T KOG1359|consen 352 GDAR-------LASKMADELLKRGIYVIGFSYPVV--PKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFL 413 (417)
T ss_pred ccHH-------HHHHHHHHHHhcCceEEeecCCcC--CCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhh
Confidence 9876 888999999999999999999987 8888899999999999999999999999887654
No 6
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=100.00 E-value=3.9e-50 Score=399.88 Aligned_cols=354 Identities=27% Similarity=0.461 Sum_probs=307.7
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAI 157 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai 157 (457)
+|++++||+||+|+|++.||++++|+.+++++|+.++++++..+|+.+.+.+|++++++++|.+.+++++||++|+..++
T Consensus 43 ~~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~~~l~~~sG~~an~~ai 122 (402)
T TIGR01821 43 GAKDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKESALVFTSGYVANDATL 122 (402)
T ss_pred CCeeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCCeEEEECchHHHHHHHH
Confidence 46999999999999999999999999999999999888899888999999999999999999999999999999999999
Q ss_pred HhhcC--CCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC
Q psy15447 158 AAYVK--RNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP 235 (457)
Q Consensus 158 ~a~~~--~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~ 235 (457)
+.+.+ +++.|+.+..+|.+...++...+.++..++++|++++++.++... ++++++|++|+++|++|.+.|
T Consensus 123 ~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~-------~~~~~~v~~e~~~~~~G~~~~ 195 (402)
T TIGR01821 123 ATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRHNDVAHLEKLLQSVD-------PNRPKIIAFESVYSMDGDIAP 195 (402)
T ss_pred HHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECCCCHHHHHHHHHhcc-------CCCCeEEEEcCCCCCCCCccC
Confidence 98765 788999998899999999999999888899999999999997532 135689999999999999999
Q ss_pred hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcce
Q psy15447 236 LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYC 315 (457)
Q Consensus 236 l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~ 315 (457)
+++|+++|++||++||+||+|++|.+|+.|.|..+++++. +++||+++||+|++|+.|||+++++++++.++....++.
T Consensus 196 l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~-~~~div~~t~sKa~g~~GG~i~~~~~~~~~l~~~~~~~~ 274 (402)
T TIGR01821 196 IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLM-HRIDIIEGTLAKAFGVVGGYIAASRKLIDAIRSYAPGFI 274 (402)
T ss_pred HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCC-CCCeEEEEechhhhccCCceeecCHHHHHHHHHhCcCce
Confidence 9999999999999999999999999998888877666764 456899999999999999999999999999887666677
Q ss_pred ecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHH
Q psy15447 316 FSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQT 395 (457)
Q Consensus 316 ~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 395 (457)
|+++.+|..+++++++++.+++.+.+.++++++.+++++.|++ .|+++. .+.++++++.++... .+.+
T Consensus 275 ~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~i~~i~~~~~~-------~a~~ 342 (402)
T TIGR01821 275 FTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEA----LGIPVI-PNPSHIVPVIIGDAA-------LCKK 342 (402)
T ss_pred ecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH----cCCCcC-CCCCCEEEEEeCCHH-------HHHH
Confidence 8888899999999999999877666777888999999999988 566654 346778877665422 4567
Q ss_pred HHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 396 ICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 396 ~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
+.+.|++ +||++++..+|.. +.+.+++||+++..+|++|+++++++|+++++++.-
T Consensus 343 ~~~~L~~~~Gi~v~~~~~p~~--~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~~~ 399 (402)
T TIGR01821 343 VSDLLLNKHGIYVQPINYPTV--PRGTERLRITPTPAHTDKMIDDLVEALLLVWDRLGL 399 (402)
T ss_pred HHHHHHhcCCEEEEeECCCCC--CCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 8888875 5999998777644 334578999999999999999999999999887643
No 7
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=4.5e-50 Score=399.56 Aligned_cols=352 Identities=24% Similarity=0.397 Sum_probs=306.2
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAI 157 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai 157 (457)
+|+++++|+||+|||+..||+|++++.++++++++++++++..+++.+.+.+|+++|++++|.+.+++++||++|+..++
T Consensus 43 ~~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~SG~~An~~ai 122 (406)
T PRK13393 43 GPREVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEAALLFTSGYVSNWAAL 122 (406)
T ss_pred CCccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHH
Confidence 35899999999999999999999999999999999888888888888899999999999999999999999999999999
Q ss_pred HhhcC--CCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC
Q psy15447 158 AAYVK--RNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP 235 (457)
Q Consensus 158 ~a~~~--~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~ 235 (457)
+++.+ +++.|+.+..+|+++..+++..+.++..++++|++++++.++... ++++++|++|++++++|.+.|
T Consensus 123 ~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~-------~~~~~~v~~~~v~~~~G~~~~ 195 (406)
T PRK13393 123 STLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRHNDPADLERKLSDLD-------PHRPKLVAFESVYSMDGDIAP 195 (406)
T ss_pred HHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCCCCHHHHHHHHHhcc-------CCCCEEEEEcCCCCCCCchhC
Confidence 97665 789999999999999999999999888999999999999887542 135679999999999999999
Q ss_pred hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcce
Q psy15447 236 LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYC 315 (457)
Q Consensus 236 l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~ 315 (457)
+++|+++|++||+++|+||+|++|.+|++|.++.++.++. +++||+++||+|++|..|||+++++++++.++....++.
T Consensus 196 l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~-~~~~i~~~tlsKa~g~~GG~~~~~~~~~~~l~~~~~~~~ 274 (406)
T PRK13393 196 IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLA-DRLTIIEGTLAKAFGVMGGYITGSAALCDFIRSFASGFI 274 (406)
T ss_pred HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCC-CCCeEEEEeCchhhcccCceeeCCHHHHHHHHHhCcCce
Confidence 9999999999999999999999998999988877777775 356899999999999999999999999999887776777
Q ss_pred ecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHH
Q psy15447 316 FSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQT 395 (457)
Q Consensus 316 ~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 395 (457)
++++.+|..++++.++++.+++....+++++++.+++++.|++ .++++. ++.++++++.+.+.. ...+
T Consensus 275 ~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~i~~v~~~~~~-------~~~~ 342 (406)
T PRK13393 275 FTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDK----AGIPHL-PNPSHIVPVMVGDPV-------LCKQ 342 (406)
T ss_pred ecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH----cCCCcC-CCCCCeEEEEeCCHH-------HHHH
Confidence 7878899999999999998876544567788999999999988 466554 456788887665432 4567
Q ss_pred HHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 396 ICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 396 ~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+.+.|++ +||++++..+|.. +.+.+++||+++..+|++|+++++++|+++++.+
T Consensus 343 l~~~L~~~~Gi~v~~~~~p~~--p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 343 ISDELLDRYGIYVQPINYPTV--PRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred HHHHHHHhCCEEEEeECCCCC--CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 8999988 5999998777643 3445789999999999999999999999988765
No 8
>KOG1360|consensus
Probab=100.00 E-value=8.5e-51 Score=371.35 Aligned_cols=353 Identities=26% Similarity=0.438 Sum_probs=327.3
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHh
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA 159 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a 159 (457)
+++--||||+|||++.||+|.+|+.+.++++|.+.+|.|+..|++..+.+||++||++.+.+.+++|+|.+-||++.+..
T Consensus 171 k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLft 250 (570)
T KOG1360|consen 171 KKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEAALLFSSCFVANDSTLFT 250 (570)
T ss_pred CceEEEecCccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcCcceeeeeeeeeccchHHHH
Confidence 66777999999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred hcC--CCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChH
Q psy15447 160 YVK--RNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLK 237 (457)
Q Consensus 160 ~~~--~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~ 237 (457)
+.+ ||-+|+.|...|.++..|++-++++-+.|+|||+++|+++|++.. +...++|..|++++++|.++||+
T Consensus 251 Lak~lpgcei~SD~gNHASMI~GIrns~v~K~IFrHND~~hL~~lL~~~~-------~svPKivAFEtVhSM~Gavcple 323 (570)
T KOG1360|consen 251 LAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRHNDLDHLEQLLQSSP-------KSVPKIVAFETVHSMDGAVCPLE 323 (570)
T ss_pred HHHHCCCcEEeccccchHHHHHHhhhcCCcceeeccCCHHHHHHHHHhCC-------CCCCceEEEeeeeccCCCcCCHH
Confidence 654 788899999999999999999999999999999999999998754 35678999999999999999999
Q ss_pred HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcceec
Q psy15447 238 DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFS 317 (457)
Q Consensus 238 ~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~~~ 317 (457)
+|.+++++||++-.+||+|..|.+|+.|.|..+..|+- ..+||+.||++|+||..|||++++..+++.+|..+.+|.|+
T Consensus 324 elcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm-~kvDiIsGTLgKafGcVGGYIAat~~LvDmiRSyAaGFIFT 402 (570)
T KOG1360|consen 324 ELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVM-HKVDIISGTLGKAFGCVGGYIAATRKLVDMIRSYAAGFIFT 402 (570)
T ss_pred HHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcc-hhhhhcccchhhhcccccceehhhhhHHHHHHHhcCceEEe
Confidence 99999999999999999999999999999999999985 68999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHH
Q psy15447 318 ASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQT 395 (457)
Q Consensus 318 ~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 395 (457)
+++||+..+.+++++++++.. ..++..-+++.+++++.|.+ .|+++. +..++++++.+++.. .+..
T Consensus 403 TSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~----~GiPVi-~~pSHIiPv~vgda~-------l~~~ 470 (570)
T KOG1360|consen 403 TSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLME----LGIPVI-PNPSHIIPVRVGDAA-------LAKQ 470 (570)
T ss_pred cCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH----cCCccc-CCCcceeeeeccCHH-------HHHH
Confidence 999999999999999999765 56778888999999999999 888886 556899999999876 7788
Q ss_pred HHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447 396 ICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQP 454 (457)
Q Consensus 396 ~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~ 454 (457)
+++.|+.+ |||+....||.+ +.+...+||.|+..||++-++.+++++..+..++.=+
T Consensus 471 ~sd~Li~~h~iYvQaINyPTV--~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~l~ 528 (570)
T KOG1360|consen 471 ASDILISKHNIYVQAINYPTV--ARGTERLRIAPTPHHTPQMMNILVNALLDVWNEVGLP 528 (570)
T ss_pred HHHHHHHhcCeEEEeccCCcc--cccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcCCc
Confidence 99998865 999999999988 7778899999999999999999999999998877543
No 9
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=100.00 E-value=1.2e-49 Score=392.43 Aligned_cols=369 Identities=37% Similarity=0.675 Sum_probs=307.9
Q ss_pred EEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcC
Q psy15447 83 INFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVK 162 (457)
Q Consensus 83 id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~ 162 (457)
|||+||+|||+..||++++++.+++++||.++|++|.+||+...+.+||+++|+++|.+.++++++|+.|+..++.++++
T Consensus 1 ~~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~l~~ 80 (392)
T PLN03227 1 LNFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTESAILYSDGASTTSSTVAAFAK 80 (392)
T ss_pred CCCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHhCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcc---cCCCCccEEEEEecCCCCCCCCCChHHH
Q psy15447 163 RNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDT---LNSKVTKKFIIVEGVYMNSADICPLKDI 239 (457)
Q Consensus 163 ~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~---~~~~~~~~~vi~e~v~~~~G~i~~l~~i 239 (457)
+||.|++++..|++++.++.+.+.++.+++++|++++++.++....... ..+.+++++|++|++++++|.+.|+++|
T Consensus 81 ~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i 160 (392)
T PLN03227 81 RGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKEL 160 (392)
T ss_pred CCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHH
Confidence 9999999999999999999999999999999999999887765532110 0012357899999999999999999999
Q ss_pred HHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC-CCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcceecC
Q psy15447 240 LSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST-EEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSA 318 (457)
Q Consensus 240 ~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~-~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~~~~ 318 (457)
+++|++||+++|+||+|++|.+|++|++..+++|+.| .++||++.|++|++|..||++++++++++.++...++++|++
T Consensus 161 ~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~gg~v~~~~~~~~~~~~~~~~~~~~~ 240 (392)
T PLN03227 161 VALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVGGMTVGSEEVVDHQRLSGSGYCFSA 240 (392)
T ss_pred HHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccCcEEecCHHHHHHHHHhCcCccccC
Confidence 9999999999999999999999999999999999976 678999999999999999999999999988877677788988
Q ss_pred CCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccC-------CeEEeccCCCCeEEEEecCCcchH--HH
Q psy15447 319 SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQ-------RFLVQGHRDTPLKYLYLQKSDDEV--AS 389 (457)
Q Consensus 319 ~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~-------~~~~~~~~~~~~~~i~~~~~~~~~--~~ 389 (457)
+.+|+.+++++++++.+.+.+++++++++++++|++.|++.. .+ ++.+.....++++++.+.+..... ..
T Consensus 241 ~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~~-~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~ 319 (392)
T PLN03227 241 SAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNSS-HPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDE 319 (392)
T ss_pred CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcC-CccccccccccccCCCCCCCEEEEEeCCHHHhhhhhh
Confidence 888988888888876655566789999999999999998611 11 111122346889999886532110 00
Q ss_pred HHHHHHHHHHHHHcCeeEecccc-Ccc-ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 390 KKLLQTICDMCIQAGFAITCPSH-LDQ-EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 390 ~~~~~~~~~~l~~~Gi~v~~~~~-~~~-~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
.....++++.|+++|+++.+... +.. ....++..+|++++..||+||||+++++|+++++.+.
T Consensus 320 ~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~~ 384 (392)
T PLN03227 320 TLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAIL 384 (392)
T ss_pred hhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11235899999999999865321 100 0022357899999999999999999999999998775
No 10
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-50 Score=377.50 Aligned_cols=348 Identities=19% Similarity=0.204 Sum_probs=290.0
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|.++++|+|.|||+ +||+||||.++ +.+|+. ||.+.+|+.+|+++..+.+..+ .++...+|+++|++..
T Consensus 24 ~~~~~~~G~G~~v~D~~G~~YlDf~~Giav~~lGH~-hP~iv~al~~Q~~kl~h~sn~~-----~~~~~~~la~~L~~~s 97 (404)
T COG4992 24 LPVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHC-HPALVEALKEQAEKLWHVSNLF-----YNEPQAELAEKLVELS 97 (404)
T ss_pred CceeEEeccccEEECCCCCEeeeeccceeeeccCCC-CHHHHHHHHHHHHHhhhccccc-----CChHHHHHHHHHHhhC
Confidence 467899999999995 99999999875 455664 9999999999999987654433 6789999999999999
Q ss_pred C-CCcEEEecccHHHHHHHHHhhc---C---CCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCCCHHHH
Q psy15447 139 G-LEETALYSFGFSTSASAIAAYV---K---RNDAVFVDENINFAIQTGLIASRC------------KVQYFKHNNMQHL 199 (457)
Q Consensus 139 g-~~~~i~~~sG~~a~~~ai~a~~---~---~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~d~~~l 199 (457)
+ .+.++|+|||+|||++||+... . +.++|.....+|+.+..++++++- .+..+|+||++++
T Consensus 98 ~~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al 177 (404)
T COG4992 98 PFADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEAL 177 (404)
T ss_pred ccccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHH
Confidence 7 9999999999999999998643 3 447888899999999888777652 3457889999999
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccccCC
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYFGV 274 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~~~ 274 (457)
++++.+ .+++|++||+++.+|.++| |+++++||++||++||+||+|.. +|++|..+ .+++|+
T Consensus 178 ~~ai~~-----------~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG--~GRTGk~fA~e~~gV 244 (404)
T COG4992 178 EAAIDE-----------DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTG--LGRTGKLFAYEHYGV 244 (404)
T ss_pred HHHhcc-----------CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccC--CCccchHHHHHHhCC
Confidence 999964 5789999999999999877 89999999999999999999964 56777754 599999
Q ss_pred CCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHH
Q psy15447 275 STEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTM 352 (457)
Q Consensus 275 ~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l 352 (457)
.| ||+ +++|++|+ +-|+++.++.+.+.+....|+.+|++ ||++||++.++++.+.++ ++.++.++++++|
T Consensus 245 ~P---DI~--tlaK~LgGG~PigA~la~~~~~~~~~~G~HgSTfGG--NpLacAv~~a~l~~l~~e-~ll~~v~~~g~~~ 316 (404)
T COG4992 245 EP---DIL--TLAKALGGGFPIGAMLATEEIASAFTPGDHGSTFGG--NPLACAVALAVLEVLLEE-GLLENVREKGEYL 316 (404)
T ss_pred CC---CEE--EeeccccCCccceeeEEchhhhhcCCCCcccCCCCc--CHHHHHHHHHHHHHHcch-hHHHHHHHHHHHH
Confidence 98 787 89999963 34667777777777777778877776 999999999999999754 5899999999999
Q ss_pred HHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCC
Q psy15447 353 HSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISH 432 (457)
Q Consensus 353 ~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~ 432 (457)
++.|+++...-++--..+..+.++.+.+..+. .+..+++.|.++|+++.+.. ++++||.||+.+
T Consensus 317 ~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~-------~a~~~~~~~~~~gvL~~~a~---------~~ViR~~PpL~i 380 (404)
T COG4992 317 LQRLRELKRRYPLVKEVRGRGLMIGIELKEPY-------RARDIVRALREEGVLVLPAG---------PNVIRFLPPLVI 380 (404)
T ss_pred HHHHHHHhhcCCceeeeecceeEEEEEecCcc-------cHHHHHHHHHHCCeEEecCC---------CCeEEecCCccC
Confidence 99999854222211122467899999998764 46789999999999987654 579999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhcC
Q psy15447 433 TEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 433 t~edi~~~~~~l~~~~~~~~~ 453 (457)
|++|+++++++++++++....
T Consensus 381 ~~eei~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 381 TEEEIDEALDALERALAAASA 401 (404)
T ss_pred CHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999986643
No 11
>PRK09064 5-aminolevulinate synthase; Validated
Probab=100.00 E-value=5.7e-49 Score=392.32 Aligned_cols=352 Identities=27% Similarity=0.480 Sum_probs=305.3
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIA 158 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~ 158 (457)
|++++||+||+|+|++.||++.+++.++++++++++++++..+|+.+.+.+|+++||+++|.+.++++++|++|+..+++
T Consensus 45 ~~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ai~ 124 (407)
T PRK09064 45 EREVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEAALVFTSGYVSNDATLS 124 (407)
T ss_pred CceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHH
Confidence 59999999999999999999999999999999998888888888999999999999999999899999999999999999
Q ss_pred hhcC--CCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCCh
Q psy15447 159 AYVK--RNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPL 236 (457)
Q Consensus 159 a~~~--~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l 236 (457)
.+.+ +++.|+.+...|.+...+++..+.++..++++|++++++.++... ++++++|+++++++++|.+.|+
T Consensus 125 ~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-------~~~~~~v~~~~v~s~~G~~~~l 197 (407)
T PRK09064 125 TLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRHNDVAHLEELLAAAD-------PDRPKLIAFESVYSMDGDIAPI 197 (407)
T ss_pred HHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECCCCHHHHHHHHHhcc-------CCCCeEEEEeCCCCCCccccCH
Confidence 8765 788888898899999999999999988999999999999987532 1356899999999999999999
Q ss_pred HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCccee
Q psy15447 237 KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCF 316 (457)
Q Consensus 237 ~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~~ 316 (457)
++|+++|++||++||+||+|++|.+|++|.++.++.++. +++||+++||||++|+.|||+++++++++.++....++.|
T Consensus 198 ~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~-~~~div~~t~sKa~g~~GG~~~~~~~~~~~l~~~~~~~~~ 276 (407)
T PRK09064 198 AEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLM-DRIDIIEGTLAKAFGVMGGYIAGSAALVDAVRSYAPGFIF 276 (407)
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCC-CCCeEEEEecchhhhccCceEecCHHHHHHHHHhCccccc
Confidence 999999999999999999999888898888876666764 4568999999999999999999999999988776666777
Q ss_pred cCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHH
Q psy15447 317 SASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTI 396 (457)
Q Consensus 317 ~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 396 (457)
+++.+|..+++++++++.+++.+..+++++++++++.+.|++ .|+++. .+.++++++.+++.. .+.++
T Consensus 277 t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~iv~i~~~~~~-------~~~~l 344 (407)
T PRK09064 277 TTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDA----AGIPVM-PNESHIVPVMVGDPE-------KCKKA 344 (407)
T ss_pred cCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH----cCCCCC-CCCCCEEEEEeCCHH-------HHHHH
Confidence 777899999999999999887666678899999999999998 566654 345778877775432 56688
Q ss_pred HHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 397 CDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 397 ~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
.++|++ +||++++..+|.. +.+.+++||+++..+|++|+++++++|+++++.+.
T Consensus 345 ~~~L~~~~gi~v~~~~~p~~--~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~~ 399 (407)
T PRK09064 345 SDMLLEEHGIYVQPINYPTV--PRGTERLRITPTPFHTDEMIDHLVEALVEVWARLG 399 (407)
T ss_pred HHHHHHhCCEEEeeECCCCC--CCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 898875 5999988776543 33447899999999999999999999999987654
No 12
>PLN02483 serine palmitoyltransferase
Probab=100.00 E-value=8.5e-49 Score=395.43 Aligned_cols=362 Identities=26% Similarity=0.474 Sum_probs=312.7
Q ss_pred CCeeeEEeecCCccCCCC-ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHH
Q psy15447 78 NGIPCINFATHNYLSFVE-NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASA 156 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~-~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~a 156 (457)
+++++|||+|+||||+++ ++...+++.+++++||.++|+++..+|+.+.+.+||+++|+++|.+.++++++|+.++..+
T Consensus 98 ~~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~~~ai~~~~G~~an~~~ 177 (489)
T PLN02483 98 KTRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGKPAAIVFGMGYATNSTI 177 (489)
T ss_pred CCceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHH
Confidence 478999999999999995 6788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhc-cc-CCCCccEEEEEecCCCCCCCCC
Q psy15447 157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERD-TL-NSKVTKKFIIVEGVYMNSADIC 234 (457)
Q Consensus 157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~-~~-~~~~~~~~vi~e~v~~~~G~i~ 234 (457)
+.+++++||.|++++++|.++..+++..|.++..++++|++++++.+++..... .+ ..+.++.+|++|++++++|.+.
T Consensus 178 i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~ 257 (489)
T PLN02483 178 IPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELC 257 (489)
T ss_pred HHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCccc
Confidence 999999999999999999999999999999999999999999998887532110 00 0012345888999999999999
Q ss_pred ChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcc
Q psy15447 235 PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGY 314 (457)
Q Consensus 235 ~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~ 314 (457)
++++|+++|++||++||+||+|++|.+|++|++..+++++.+.++||+++||||++|+.|||+++++++++.++....++
T Consensus 258 ~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~GG~i~~~~~li~~l~~~~~~~ 337 (489)
T PLN02483 258 KLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKRTCPAH 337 (489)
T ss_pred CHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCceEEEcCHHHHHHHHHhCccc
Confidence 99999999999999999999999998999999988888988888999999999999999999999999999998766666
Q ss_pred eecCCCcHHHHHHHHHHHHHHhhC------cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHH
Q psy15447 315 CFSASLPPFLAVAANKALHLLKAN------PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVA 388 (457)
Q Consensus 315 ~~~~~~~~~~~aaa~a~l~~~~~~------~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 388 (457)
.++.+++|..++++.++++.+... .+++++++++.+++++.|++ .|+.+.++..++++++.+....
T Consensus 338 ~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~----~G~~v~~~~~sp~~~l~l~~~~---- 409 (489)
T PLN02483 338 LYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQK----MGFEVLGDNDSPVMPIMLYNPA---- 409 (489)
T ss_pred cccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHH----CCCcccCCCCCCEEEEEECCHH----
Confidence 677777888888888888876532 24678899999999999998 5777665566788888776543
Q ss_pred HHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 389 SKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 389 ~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
...+++++|+++||.+.+..+|.. +...+.+||+++..+|++||++++++|+++.+.+.
T Consensus 410 ---~~~~~~~~Ll~~GI~v~~~~fp~~--p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~ 468 (489)
T PLN02483 410 ---KIPAFSRECLKQNVAVVVVGFPAT--PLLLARARICISASHSREDLIKALEVISEVGDLVG 468 (489)
T ss_pred ---HHHHHHHHHHHCCcEEeeeCCCCC--CCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 556799999999999998776543 33457899999999999999999999999987653
No 13
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=2.8e-47 Score=380.12 Aligned_cols=353 Identities=26% Similarity=0.441 Sum_probs=303.3
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAI 157 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai 157 (457)
+|+++++|+||+|+++++||++++++.+++++++.++++++.++|..+.+.+|+++|++++|.+.+++++||++|+..++
T Consensus 44 ~~~~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~~~i~~~sG~~a~~~~i 123 (410)
T PRK13392 44 GPRRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKESALLFTSGYVSNDAAL 123 (410)
T ss_pred CCceEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHH
Confidence 47899999999999999999999999999999998888888888888889999999999999999999999999999999
Q ss_pred HhhcC--CCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC
Q psy15447 158 AAYVK--RNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP 235 (457)
Q Consensus 158 ~a~~~--~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~ 235 (457)
..+.. +|+.|+.+..+|.++..+++..|.++..++++|++++++.+++.. ++++++|++++++||+|.+.|
T Consensus 124 ~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~-------~~~t~~v~i~~~~n~tG~~~~ 196 (410)
T PRK13392 124 STLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHNDLADLEEQLASVD-------PDRPKLIAFESVYSMDGDIAP 196 (410)
T ss_pred HHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcc-------CCCCEEEEEeCCCCCCccccc
Confidence 87754 789999999999999999999999988889999999988887543 146789999999999999999
Q ss_pred hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcce
Q psy15447 236 LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYC 315 (457)
Q Consensus 236 l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~ 315 (457)
+++|+++|++||+++|+||+|+.|.+|+.|.++.++.++. +++|++++|+||++|+.|||+++++++++.++....++.
T Consensus 197 l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~-~~~div~~tlsK~~g~~GG~~~~~~~~~~~l~~~~~~~~ 275 (410)
T PRK13392 197 IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLM-DRIDMIQGTLAKAFGCLGGYIAASADLIDFVRSFAPGFI 275 (410)
T ss_pred HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCC-CCCcEEEEEChHhhhcccchhhcCHHHHHHHHHhCcchh
Confidence 9999999999999999999999888888877766555653 456899999999999999999999999998887666677
Q ss_pred ecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHH
Q psy15447 316 FSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQT 395 (457)
Q Consensus 316 ~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 395 (457)
++++.+|+.++++.++|+.++...+.+++++++.+++++.|++ .|+++. ++.++++.+.++.+. ...+
T Consensus 276 ~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~~~~i~~~~~~-------~~~~ 343 (410)
T PRK13392 276 FTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNA----NGIPVM-PSPSHIVPVMVGDPT-------LCKA 343 (410)
T ss_pred ccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH----cCCCCC-CCCCCEEEEEeCCHH-------HHHH
Confidence 7777888889999999998876666678899999999999988 576654 456777777665432 4567
Q ss_pred HHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 396 ICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 396 ~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
++++|+ ++||++.+..+|.. +.+..++|++++..+|++|+++++++|+++.+++.
T Consensus 344 ~~~~L~~~~GI~v~~~~~p~~--~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~~ 399 (410)
T PRK13392 344 ISDRLMSEHGIYIQPINYPTV--PRGTERLRITPTPLHDDEDIDALVAALVAIWDRLE 399 (410)
T ss_pred HHHHHHHhCCEEEeeeCCCCC--CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHcC
Confidence 999987 57999998776543 33457899999999999999999999999987653
No 14
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=4.4e-46 Score=370.32 Aligned_cols=381 Identities=28% Similarity=0.448 Sum_probs=318.5
Q ss_pred HcccCCCCCCCccccccccCCceeeecCCCcEEEE-CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcc
Q psy15447 43 INNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNI-NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFY 121 (457)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~-~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~ 121 (457)
++++..+++++ .+..+.++.|.++++ +|+++|||++++|+|++.+|++++++.+++++++.++++++...
T Consensus 9 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~ 79 (393)
T TIGR01822 9 LESIREAGLFK---------SERIITSPQGADIRVADGREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFIC 79 (393)
T ss_pred HHHHHHcCCCC---------cccccccCCCceEEecCCceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCccc
Confidence 34555556655 467788899999997 99999999999999999999999999999999888888888888
Q ss_pred cChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHH
Q psy15447 122 GTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEE 201 (457)
Q Consensus 122 g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~ 201 (457)
|+.+.+.+|++.+|+++|.+.+++++||++|+..++.+++++||.|+++.++|.++..++++.+.+...++++|++++++
T Consensus 80 G~~~~~~~le~~ia~~~g~~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~~~d~~~l~~ 159 (393)
T TIGR01822 80 GTQDIHKELEAKIAAFLGTEDTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEA 159 (393)
T ss_pred CChHHHHHHHHHHHHHhCCCcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeCCCCHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999888888888999999999
Q ss_pred HHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccE
Q psy15447 202 LLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDM 281 (457)
Q Consensus 202 ~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di 281 (457)
.+++... ++.++++|++++++|++|.+.|+++|+++|++||++||+||+|++|.+|..|.+..+..++. +++|+
T Consensus 160 ~i~~~~~-----~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di 233 (393)
T TIGR01822 160 QLKEARA-----AGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDI 233 (393)
T ss_pred HHHhhhh-----cCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeE
Confidence 9976421 11367899999999999999999999999999999999999999888887777665556664 35799
Q ss_pred EEecCccccc-CcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccc
Q psy15447 282 IIGSLEHALG-SVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHK 360 (457)
Q Consensus 282 ~~~s~sK~lg-~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~ 360 (457)
+++|+||+++ ..+||+++++++++.++.....+.++++.++..++++.++++.++..++.+++++++.+++.+.|++
T Consensus 234 ~~~s~sK~l~g~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~-- 311 (393)
T TIGR01822 234 ITGTLGKALGGASGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEA-- 311 (393)
T ss_pred EEEEChHHhhCCCcEEEEeCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH--
Confidence 9999999996 5689999999999988765556677777777777788888887765566889999999999999988
Q ss_pred ccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHH
Q psy15447 361 VTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSL 440 (457)
Q Consensus 361 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~ 440 (457)
.|+.+. .+.++++.+.+.+.. ...++++.|.++||++....+|.. +.+..++|++++..+|++||+++
T Consensus 312 --~g~~~~-~~~~~~~~i~~~~~~-------~~~~l~~~L~~~gI~v~~~~~~~~--~~~~~~iRis~~~~~t~edi~~~ 379 (393)
T TIGR01822 312 --AGFDIK-PADHPIIPVMLYDAV-------LAQRFARRLLEEGIYVTGFFYPVV--PKGQARIRVQISAAHTEEQLDRA 379 (393)
T ss_pred --cCCCCC-CCCCCEEEEEeCCHH-------HHHHHHHHHHHCCeeEeeeCCCCC--CCCCceEEEEECCCCCHHHHHHH
Confidence 466654 334667766655422 456899999999999875544322 22345799999999999999999
Q ss_pred HHHHHHHHHHhc
Q psy15447 441 IETLCKSHDIAV 452 (457)
Q Consensus 441 ~~~l~~~~~~~~ 452 (457)
+++|+++.+++.
T Consensus 380 ~~~l~~~~~~~~ 391 (393)
T TIGR01822 380 VEAFTRIGRELG 391 (393)
T ss_pred HHHHHHHHHHhC
Confidence 999999877553
No 15
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-46 Score=360.96 Aligned_cols=360 Identities=19% Similarity=0.225 Sum_probs=284.6
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC-CccCCC-CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH-NYLSFV-ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG 139 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g 139 (457)
.|.++++++|+||| +|||+||||.++ +.++++ +||.|.+|+.+|+.++.+... +. ...+...+++++|.+.++
T Consensus 38 ~p~~~~ra~G~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~--~~--~~~e~~v~~ae~L~~~~p 113 (447)
T COG0160 38 FPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHT--RD--LYYEPYVELAEKLTALAP 113 (447)
T ss_pred CcceEEecccCEEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccC--Cc--ccchhHHHHHHHHHHhCC
Confidence 68999999999999 599999999874 434444 499999999999999764332 22 234889999999999876
Q ss_pred C---CcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhcCCe-------------EEEecCCC-----
Q psy15447 140 L---EETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIASRCK-------------VQYFKHNN----- 195 (457)
Q Consensus 140 ~---~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~g~~-------------~~~~~~~d----- 195 (457)
. +.++|.+||++||+.||+. .+++..+|.....+|+.+..++.+++.. ++.+|+.+
T Consensus 114 ~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p 193 (447)
T COG0160 114 GSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCP 193 (447)
T ss_pred cccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCc
Confidence 4 5788999999999999975 5788899999999999999999888632 33333321
Q ss_pred ------------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccc
Q psy15447 196 ------------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFG 259 (457)
Q Consensus 196 ------------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g 259 (457)
.+.+++.+.... .++..++++|+||+++.+|.+.| +++++++|++||++||+||+|+.
T Consensus 194 ~~~~~~~~~~~~~~~~e~~i~~~~-----~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG- 267 (447)
T COG0160 194 FGIGGEECGDDALEYIERALFDLE-----VGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTG- 267 (447)
T ss_pred ccCchhhhhHHHHHHHHHHHHhhc-----CCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC-
Confidence 223444443322 23477899999999999998876 89999999999999999999953
Q ss_pred cccCCCCc-cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh
Q psy15447 260 TLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK 336 (457)
Q Consensus 260 ~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~ 336 (457)
+|++|.. ..+++|+.| ||+ |++|++|. +.|.+++++++++ .....+.++|++ ||++||+++++|+.++
T Consensus 268 -~GRTG~~fa~E~~gv~P---Div--t~aK~ig~G~Pl~avv~r~ei~~-~~~g~~~~Tf~G--Npva~Aaa~AvL~vie 338 (447)
T COG0160 268 -FGRTGKMFAFEHFGVEP---DIV--TLAKSLGGGLPLSAVVGRAEIMD-WPPGGHGGTFGG--NPVACAAALAVLDVIE 338 (447)
T ss_pred -CCccccchhhhhcCCCC---CEE--EecccccCCCceeEEeccHHhcc-cCCcccCCCCCc--CHHHHHHHHHHHHHHH
Confidence 4555654 569999988 787 89999964 4588999999998 555565666554 9999999999999988
Q ss_pred hCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc--CCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccC
Q psy15447 337 ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH--RDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHL 413 (457)
Q Consensus 337 ~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~ 413 (457)
++ .+.++..+.++++++.|.+++. ..++.++ ..+.++.+.+..+..+ +++...+.+++++|+++|+++...+
T Consensus 339 ~e-~L~~~a~~~G~~l~~~L~~l~~--~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G-- 413 (447)
T COG0160 339 EE-NLLERAAELGEYLRDRLEELQE--KHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCG-- 413 (447)
T ss_pred Hc-cHHHHHHHHHHHHHHHHHHHHh--hcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccC--
Confidence 76 5999999999999999987542 2333333 4578999988765433 3444578899999999998876543
Q ss_pred ccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 414 DQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 414 ~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
...|.+||.||+++|++++|+++++|+++++++
T Consensus 414 -----~~~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 414 -----PHGNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred -----CCCcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 236899999999999999999999999998865
No 16
>PRK07179 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-45 Score=367.47 Aligned_cols=348 Identities=21% Similarity=0.344 Sum_probs=295.6
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAI 157 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai 157 (457)
+|+.++||+|++||++.+||++++++.+++++++.+++.++.+.+..+.+.+|+++||+++|.+.+++++||++|+..++
T Consensus 52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~sG~~An~~~l 131 (407)
T PRK07179 52 PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFESCLLCQSGWAANVGLL 131 (407)
T ss_pred CCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHH
Confidence 46778899999999999999999999999999876655555555556789999999999999999999999999999999
Q ss_pred HhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChH
Q psy15447 158 AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLK 237 (457)
Q Consensus 158 ~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~ 237 (457)
+++..+||.|+++...|.+.+.+++..|.++..++++|++++++.+++ .++++|++++++|++|.+.|++
T Consensus 132 ~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~----------~~~~lV~v~~v~n~tG~i~pl~ 201 (407)
T PRK07179 132 QTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRHNDVDHLRRQIER----------HGPGIIVVDSVYSTTGTIAPLA 201 (407)
T ss_pred HHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecCCCHHHHHHHHHh----------cCCeEEEECCCCCCCCccccHH
Confidence 999999999999999999999999999999999999999999998864 2357899999999999999999
Q ss_pred HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcceec
Q psy15447 238 DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFS 317 (457)
Q Consensus 238 ~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~~~ 317 (457)
+|+++|++||++||+||+|++|.+|++|.++...+++. .++|+++.|++|++|+.+|++++++++++.+.....+..++
T Consensus 202 ~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~-~~vdi~~~S~sK~~g~~~G~l~~~~~~~~~~~~~~~~~~~~ 280 (407)
T PRK07179 202 DIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLT-SRVHFITASLAKAFAGRAGIITCPRELAEYVPFVSYPAIFS 280 (407)
T ss_pred HHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCC-CCCCEEEeechHhhhccCeEEEeCHHHHHHHHHhCcCeeeC
Confidence 99999999999999999999998898888777677775 46799999999999988999999999888886555455677
Q ss_pred CCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHH
Q psy15447 318 ASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTIC 397 (457)
Q Consensus 318 ~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 397 (457)
++.++..++++.++++.++..++++++++++.+++++.|++ .|+++. +.++++++.++... ....+.
T Consensus 281 ~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~----~g~~v~--~~~~i~~l~~~~~~-------~~~~~~ 347 (407)
T PRK07179 281 STLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSE----LGYNIR--SESQIIALETGSER-------NTEVLR 347 (407)
T ss_pred CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH----cCCCCC--CCCCEEEEEeCCHH-------HHHHHH
Confidence 77777777777788888876666889999999999999988 466554 45688888765432 455788
Q ss_pred HHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 398 DMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 398 ~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+.|.++||++....+|.. +...+.+||+++..+|++|+++++++|++++++.
T Consensus 348 ~~L~~~GI~~~~~~~p~~--~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 348 DALEERNVFGAVFCAPAT--PKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred HHHHHCCceEeeecCCCC--CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 899999998654443322 2335799999999999999999999999988764
No 17
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=4.2e-46 Score=357.38 Aligned_cols=374 Identities=16% Similarity=0.138 Sum_probs=283.2
Q ss_pred CCCCCCcccccc-ccCCceeeecCCCcEEEE-CCeeeEEeecCCccCCC--CChhhHHHHHHHHHhcCCCCCCCCCcccC
Q psy15447 48 PEPIVSKAEKFK-DVSSKYVVDQKSGYIVNI-NGIPCINFATHNYLSFV--ENPDIEKCAIDCIDKNGVGSCGPRGFYGT 123 (457)
Q Consensus 48 ~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~~-~G~~~id~~s~~~l~~~--~~p~i~~a~~~~l~~~~~~~~~~~~~~g~ 123 (457)
...+|+|.+... +...|.+|++++|.|+++ |||+|||..|+.|+... +||+|.+|+.+|+++..+.. .+..+
T Consensus 10 ~~~~whP~t~~~~~~~~~~~i~~aeG~yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~----~~~~t 85 (449)
T COG0161 10 LSHLWHPFTQMRDPLAEPRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVM----FGGFT 85 (449)
T ss_pred hhheeccccccccccccceeeeecceeEEEeCCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchh----hcccC
Confidence 345556555543 322389999999999995 99999998886554333 47999999999999976532 12235
Q ss_pred hHHHHHHHHHHHhhcC---CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe-E--
Q psy15447 124 NVVHLDLENDIASFMG---LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK-V-- 188 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~-~-- 188 (457)
+++..+|+++|+++.+ .++++|.+|||+|++.|++... ++..+|.....||+.++.+++++|.. .
T Consensus 86 ~~Pa~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~ 165 (449)
T COG0161 86 HEPAIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRH 165 (449)
T ss_pred CchHHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhh
Confidence 6679999999999988 6788999999999999998642 23347888999999999999888721 1
Q ss_pred ----------EEe--cC---------CC------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCC-CCCCCC----h
Q psy15447 189 ----------QYF--KH---------NN------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN-SADICP----L 236 (457)
Q Consensus 189 ----------~~~--~~---------~d------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~-~G~i~~----l 236 (457)
... |+ .+ .++||+.+.++. +++++++|+||+.+. +|.+.| +
T Consensus 166 ~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g-------~~~IAAfI~EPv~g~agG~~~pp~~Yl 238 (449)
T COG0161 166 AFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHG-------PETIAAFIVEPVVGGAGGMLVPPPGYL 238 (449)
T ss_pred hhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcC-------cccEEEEEecccccccCCcccCChHHH
Confidence 111 11 01 345666666654 478999999999988 777766 8
Q ss_pred HHHHHHHHHcCcEEEEEcC-cccccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhh--
Q psy15447 237 KDILSLRSKYQARIFVDES-VSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLS-- 310 (457)
Q Consensus 237 ~~i~~l~~~~g~~li~DEa-~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~-- 310 (457)
+++++||++||++||+||+ .+||++|. ...++++|+.| ||+ +++|++++ +-|+++.++++.+.+...
T Consensus 239 ~~vr~iC~ky~ILlI~DEV~tGFGRTG~--~FA~e~~gi~P---Di~--~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~ 311 (449)
T COG0161 239 KRVREICDKYGILLIADEVATGFGRTGK--MFACEHAGIVP---DIL--CLAKGLTGGYLPLSAVLTSDRIYEAFSDGDA 311 (449)
T ss_pred HHHHHHHHHcCcEEEeecceeCCCcCch--hhhhhhcCCCC---Cee--eecccccccchhhHhHhhhHHHHHHHhcccC
Confidence 9999999999999999996 56665553 34569999998 787 89999952 235567788888887654
Q ss_pred ---CCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhc-ccccCCeEEeccCCCCeEEEEecCCcch
Q psy15447 311 ---GSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQ-HKVTQRFLVQGHRDTPLKYLYLQKSDDE 386 (457)
Q Consensus 311 ---~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 386 (457)
.|+++|+ .||++||+++++|+++++++ +.++.++...+|.+.|++ +...+.+-- .+..+.+..+++..+.++
T Consensus 312 ~~f~HG~TYs--ghPlacAaAla~L~i~e~e~-l~~~~~~~~~~l~~~L~~~l~~~p~Vgd-VR~~Gli~~iElv~d~~t 387 (449)
T COG0161 312 GAFMHGHTYS--GNPLACAAALANLDILEEED-LLERVAEIGAYLQAGLQAALADHPLVGD-VRGLGLIGAIELVADKAT 387 (449)
T ss_pred CeeccCCccc--cCHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHhcccCCcEEE-eeccceEEEEEEeccccc
Confidence 2444454 59999999999999998764 889999999999999987 322222211 135577888887766532
Q ss_pred --HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 387 --VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 387 --~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
..+.....++.+.++++|+++++.+ +.+-++||+.+|++||+++++++.+++++...
T Consensus 388 ~~~f~~~~~~~~~~~~~e~Gl~iRp~g----------~~i~~~PPliit~~eid~l~~~l~~al~~~~~ 446 (449)
T COG0161 388 KTPFEARVGARVRAAALERGLLIRPLG----------DVIYLMPPLIITREEIDELVDALREALDETLA 446 (449)
T ss_pred ccchhhhHHHHHHHHHHHCCeEEeecC----------CEEEEcCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 2222346688999999999999864 68999999999999999999999999987654
No 18
>KOG1357|consensus
Probab=100.00 E-value=3.5e-47 Score=353.62 Aligned_cols=358 Identities=27% Similarity=0.488 Sum_probs=322.8
Q ss_pred eeeEEeecCCccCCCC-ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHH
Q psy15447 80 IPCINFATHNYLSFVE-NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIA 158 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~-~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~ 158 (457)
.++||++|.||+||++ +-...+++.+.+++|+...|+++.--|+.+.|.++|+..|+++|.+++++|+.|+.+|.+.++
T Consensus 136 ~~~lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~e~a~vF~mGf~TNs~~~p 215 (519)
T KOG1357|consen 136 SRCLNLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGVEDAIVFSMGFATNSMNIP 215 (519)
T ss_pred eeeeeecccccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCCcceEEEeccccccccCcc
Confidence 3689999999999994 456788889999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhc--ccCCCCccEEEEEecCCCCCCCCCCh
Q psy15447 159 AYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERD--TLNSKVTKKFIIVEGVYMNSADICPL 236 (457)
Q Consensus 159 a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~--~~~~~~~~~~vi~e~v~~~~G~i~~l 236 (457)
+++.++..|+.|+..|.++..+++++|+.++.+.|||+++||++|++..... +.+++-++.+|+.|.++++.|.++.|
T Consensus 216 ~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~L 295 (519)
T KOG1357|consen 216 SLLGKGSLIISDELNHASLITGARLSGATTRVFRHNDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDL 295 (519)
T ss_pred eeecCCcceeeccccchheeccccccCceEEEEecCCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeeccc
Confidence 9999999999999999999999999999999999999999999998865332 22334566789999999999999999
Q ss_pred HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCccee
Q psy15447 237 KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCF 316 (457)
Q Consensus 237 ~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~~ 316 (457)
+++.+++++|.++|++||+|+.|+.|++|+|.+++++++|.++||++++|.|++|..||+++++++++++++.......+
T Consensus 296 p~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~GGyiagsk~lid~lrt~s~~~~y 375 (519)
T KOG1357|consen 296 PEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAGGYIAGSKELIDYLRTPSPSALY 375 (519)
T ss_pred HHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhcccccceecCcHHHHhhhccCCCceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888888
Q ss_pred cCCCcHHHHHHHHHHHHHHhhC------cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHH
Q psy15447 317 SASLPPFLAVAANKALHLLKAN------PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASK 390 (457)
Q Consensus 317 ~~~~~~~~~aaa~a~l~~~~~~------~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 390 (457)
.++++|+.+.-.+.+++.+... .+..+++.+|..+|+..|+. .|+-+.++..+|++++.+-.+.
T Consensus 376 at~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~----~gfivyG~~dSpVvplll~~~~------ 445 (519)
T KOG1357|consen 376 ATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQK----MGFIVYGNNDSPVVPLLLYGPA------ 445 (519)
T ss_pred cccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhc----CcEEEecCCCCCcceeeecCcc------
Confidence 8889999999999999888643 35678899999999999998 8898888888999998877765
Q ss_pred HHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 391 KLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 391 ~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
+...+.+.|+++++-+...++|.. +....+.|++.+..||.|+++++++.++++-++
T Consensus 446 -k~~~f~r~~l~~nigvVvvgfPat--pl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~~ 502 (519)
T KOG1357|consen 446 -KIVAFSREMLERNIGVVVVGFPAT--PLLESRARFCLSASHTKEDLDRALEVIDRVGDE 502 (519)
T ss_pred -cccHHHHHHHhcCceEEEEeCCCc--hHHHhHHHhhhcccccHHHHHHHHHHHhhhchh
Confidence 566788899999888887777755 445678999999999999999999999887644
No 19
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=100.00 E-value=1.8e-44 Score=357.89 Aligned_cols=367 Identities=26% Similarity=0.477 Sum_probs=307.1
Q ss_pred CceeeecCCCcEEEECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc
Q psy15447 63 SKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE 142 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~ 142 (457)
+|..+.+++|++|+.+|++++||++++++++..+|++.+++.+++++++...+.++.+.|..+...++++++++++|.+.
T Consensus 16 ~~~~~~~~~g~~~~~~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~~~ 95 (385)
T TIGR01825 16 SIRVLESAQGPRVRVNGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKTEA 95 (385)
T ss_pred cccccccCCCceEEECCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCCCc
Confidence 47889999999999999999999998889998899999999999998876555566677889999999999999999888
Q ss_pred EEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447 143 TALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFII 222 (457)
Q Consensus 143 ~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi 222 (457)
.+++++|++++..++.+++++||.|+++.++|.+...++...+.++..+++.|++++++.+++.. .+++++|+
T Consensus 96 ~i~~~sG~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~-------~~~~~~v~ 168 (385)
T TIGR01825 96 ALVFQSGFNTNQGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYKHADMDDLDRVLRENP-------SYGKKLIV 168 (385)
T ss_pred EEEECcHHHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhc-------cCCCeEEE
Confidence 89999999999999999999999999999999999999899999888888899999998887532 13578899
Q ss_pred EecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHH
Q psy15447 223 VEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSY 302 (457)
Q Consensus 223 ~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~ 302 (457)
++++++++|.+.|+++|.++|++||+++|+||+|+.|.++..+.+...++++. .+.|++++|+||++|+.|||++++++
T Consensus 169 ~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~gG~~~~~~~ 247 (385)
T TIGR01825 169 TDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVGGYAAGHKE 247 (385)
T ss_pred EecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCCCEEecCHH
Confidence 99999999999999999999999999999999998887776665555556665 35789999999999988999999999
Q ss_pred HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecC
Q psy15447 303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQK 382 (457)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~ 382 (457)
+++.+......+.+++..+|..++++.++++.+.+..+..++++++++++.+.|++ .|+++. .+.++++++.+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~~~~~~~~~ 322 (385)
T TIGR01825 248 LIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGK----LGYDTG-GSETPITPVVIGD 322 (385)
T ss_pred HHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH----cCCCCC-CCCCCEEEEEECC
Confidence 99988765444555555677888888888887765556788899999999999988 466654 3445676666543
Q ss_pred CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 383 SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 383 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
.. ...++++.|+++||+++...++.. +.+.+++|++++..+|++|+++++++|+++++.+
T Consensus 323 ~~-------~~~~~~~~L~~~gi~v~~~~~~~~--~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~ 382 (385)
T TIGR01825 323 EK-------AAQEFSRRLFDEGIFAQSIVFPTV--PRGTARIRNIPTAEHTKDDLDQALDAYEKVGKEL 382 (385)
T ss_pred HH-------HHHHHHHHHHHCCcEEcccCCCCC--CCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHh
Confidence 22 456799999999999876555422 2234789999999999999999999999988654
No 20
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=1.2e-43 Score=351.98 Aligned_cols=363 Identities=26% Similarity=0.435 Sum_probs=302.6
Q ss_pred CceeeecCCCcEEEECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc
Q psy15447 63 SKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE 142 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~ 142 (457)
+-+++++++|++++.+|++||||.+++++|+.++|++.+++.+++.+++.+.+.++..+|..+...++++.++++++.+.
T Consensus 22 ~~~~~~~~~g~~~~~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~ 101 (385)
T PRK05958 22 SLRPREGGAGRWLVVDGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGAER 101 (385)
T ss_pred cccccccCCCceeEeCCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCc
Confidence 56789999999999999999999998888887789999999999999886666666677788899999999999999888
Q ss_pred EEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447 143 TALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFII 222 (457)
Q Consensus 143 ~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi 222 (457)
.+++++|++++..++.+++++||.|++..++|+++..++.+.|.++..++.+|++++++.++... +++++++
T Consensus 102 ~i~~~~g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~--------~~~~lvi 173 (385)
T PRK05958 102 ALLFSSGYAANLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPHNDVDALEALLAKWR--------AGRALIV 173 (385)
T ss_pred EEEECcHHHHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhcc--------CCCeEEE
Confidence 89999999999988889999999999999999999999999999999999999999999886521 2467889
Q ss_pred EecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHH
Q psy15447 223 VEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSY 302 (457)
Q Consensus 223 ~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~ 302 (457)
++++++++|.+.++++|+++|++||+++|+||+|+.|.++..|.+....+++.....+|+++|+||++|+.||+++++++
T Consensus 174 ~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~Gg~~~~~~~ 253 (385)
T PRK05958 174 TESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSGAAVLGSET 253 (385)
T ss_pred EEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCCcEEEcCHH
Confidence 99999999999999999999999999999999999887776565544434443233358899999999988999999999
Q ss_pred HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecC
Q psy15447 303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQK 382 (457)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~ 382 (457)
+++.+......+.++++.++..++++.++++.++..+++.+++.++.+++.+.|++ .++++. ++.+.++++.+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~-~~~~~~~~~~~~~ 328 (385)
T PRK05958 254 LIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRA----LGFQLM-DSQSAIQPLIVGD 328 (385)
T ss_pred HHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH----cCCCcC-CCCCCEEEEEeCC
Confidence 88887655445566666788888888899988765556788999999999999988 456554 4567788887754
Q ss_pred CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 383 SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 383 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
.. ...++++.|.++||.+.+...+.. +.+.+++|++++..+|++|+++++++|+++
T Consensus 329 ~~-------~~~~~~~~l~~~gI~v~~~~~~~~--~~~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 329 NE-------RALALAAALQEQGFWVGAIRPPTV--PAGTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred HH-------HHHHHHHHHHHCCceEecccCCCC--CCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 32 556799999999999987543321 223478999999999999999999999875
No 21
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=4e-44 Score=339.31 Aligned_cols=387 Identities=16% Similarity=0.195 Sum_probs=307.5
Q ss_pred CChhhHHHHHcccCCCCCCCcccccccc-CCceeeecCCCcEEE-ECCeeeEEeecC-CccCCC-CChhhHHHHHHHHHh
Q psy15447 34 KHTINVDALINNWTPEPIVSKAEKFKDV-SSKYVVDQKSGYIVN-INGIPCINFATH-NYLSFV-ENPDIEKCAIDCIDK 109 (457)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~i~~a~~~~l~~ 109 (457)
.+++++.+...+..|.++.+|.+..... .+|+++++++|+|+| +|||+||||+.+ .++-++ .||.|.+|+++|+++
T Consensus 5 ~~S~~l~~~A~~~~pGGvnspvra~~~v~~~P~fi~~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~ 84 (432)
T COG0001 5 PKSEALFERAKKVIPGGVNSPVRAFKSVGGYPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLER 84 (432)
T ss_pred cchHHHHHHHhhhCCCCCCccccccCCCCCCCeeEEeccCCeEEeCCCCEeeehhccCcccccCCCCHHHHHHHHHHHHh
Confidence 3467889999999999999988776543 489999999999999 599999999753 444444 489999999999998
Q ss_pred cCCCCCCCCCcccChHHHHHHHHHHHhhcCC-CcEEEecccHHHHHHHHH---hhcCCCCEEEEeCcccHHHHHHHHhcC
Q psy15447 110 NGVGSCGPRGFYGTNVVHLDLENDIASFMGL-EETALYSFGFSTSASAIA---AYVKRNDAVFVDENINFAIQTGLIASR 185 (457)
Q Consensus 110 ~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~~~i~~~sG~~a~~~ai~---a~~~~gd~v~~~~~~h~~~~~~~~~~g 185 (457)
|..++ .+++...++++.+.+.++. |.+.|++||++|+++||+ ++++|.++|..+..||++....+.-.|
T Consensus 85 -G~~fg------~Pte~Ei~~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~ag 157 (432)
T COG0001 85 -GLSFG------APTELEVELAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAG 157 (432)
T ss_pred -cCCCC------CCCHHHHHHHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcC
Confidence 54433 2477888999999999886 999999999999999986 568899999999999988655443211
Q ss_pred -------------------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHH
Q psy15447 186 -------------------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSL 242 (457)
Q Consensus 186 -------------------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l 242 (457)
..+..+++||++++++++++.. +.+++|++||+.++.|.+.| +++|++|
T Consensus 158 sg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g--------~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~l 229 (432)
T COG0001 158 SGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYG--------DDIAAVIVEPVAGNMGVVPPEPGFLEGLREL 229 (432)
T ss_pred cCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcC--------CcEEEEEeccccCCCCCCCCCHHHHHHHHHH
Confidence 2456789999999999999864 67899999999999999988 8899999
Q ss_pred HHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcce-ecCC
Q psy15447 243 RSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYC-FSAS 319 (457)
Q Consensus 243 ~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~-~~~~ 319 (457)
|++||++||+||+.+..+... .|.+.++|+.| |+. |++|.+|+ +.|++.|++++++.+...+..|. -+.+
T Consensus 230 t~e~G~lLI~DEViTGFR~~~--gGaq~~~gi~P---Dlt--tlGKiIGGGlP~ga~gGr~eiM~~~~p~g~vyqaGT~s 302 (432)
T COG0001 230 TEEHGALLIFDEVITGFRVAL--GGAQGYYGVEP---DLT--TLGKIIGGGLPIGAFGGRAEIMEQLAPLGPVYQAGTLS 302 (432)
T ss_pred HHHcCcEEEEecchhhcccCC--cccccccCcCc---chh--hhhhhhcCCcceeeeccHHHHHhhhCCCCCccccCCCC
Confidence 999999999999987666543 46788999999 565 89999963 45889999999998866553332 1234
Q ss_pred CcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch------HHHHHHH
Q psy15447 320 LPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE------VASKKLL 393 (457)
Q Consensus 320 ~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~ 393 (457)
.||++++|+.++++.+.+.+...+++.+++++|++.|++.....+++......+.++.+.+...... ..+....
T Consensus 303 gnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~ 382 (432)
T COG0001 303 GNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERF 382 (432)
T ss_pred CcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHH
Confidence 6999999999999999876557899999999999999875444666665556677777777653211 2222345
Q ss_pred HHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 394 QTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 394 ~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
.++.+.|+++||++.|..+ =...++..||++|||+.+++++++++++..
T Consensus 383 ~~~~~~~l~~GV~l~ps~~-----------ea~flS~ahte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 383 AKFFHHLLNRGVYLAPSQF-----------EAGFLSTAHTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred HHHHHHHHhCCcccCCccc-----------cceeeecccCHHHHHHHHHHHHHHHHHhhc
Confidence 5677799999999987653 123456679999999999999999887653
No 22
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=3e-44 Score=361.53 Aligned_cols=378 Identities=16% Similarity=0.165 Sum_probs=283.8
Q ss_pred HcccCCCCCCCccccccc--cCCceeeecCCCcEEE-ECCeeeEEeec---CCccCCCCChhhHHHHHHHHHhcCCCCCC
Q psy15447 43 INNWTPEPIVSKAEKFKD--VSSKYVVDQKSGYIVN-INGIPCINFAT---HNYLSFVENPDIEKCAIDCIDKNGVGSCG 116 (457)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~g~~~~-~~G~~~id~~s---~~~l~~~~~p~i~~a~~~~l~~~~~~~~~ 116 (457)
....+.+.+|.|.+.... ...|+++++++|+|+| .|||+||||.+ +.++|+. ||+|.+|+.+|++++++.+
T Consensus 49 ~~~~~~~~~~~p~~~~~~~~~~~p~~i~~~~G~~l~D~dG~~ylD~~sg~~~~~lGh~-hp~v~~Av~~ql~~~~~~~-- 125 (504)
T PLN02760 49 ENGFKGHDMLAPFTAGWQSTDLEPLVIEKSEGSYVYDINGKKYLDALAGLWCTALGGS-EPRLVAAATEQLNKLPFYH-- 125 (504)
T ss_pred hhhhccCCcccCcccccccccCCCceEEeeeeeEEEECCCCEEEEcCcCHHhcccCCC-CHHHHHHHHHHHhhcccee--
Confidence 344556666666655432 2368899999999999 59999999987 4677864 9999999999999865432
Q ss_pred CCCcccChHHHHHHHHHHHhhcC---CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhc
Q psy15447 117 PRGFYGTNVVHLDLENDIASFMG---LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIAS 184 (457)
Q Consensus 117 ~~~~~g~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~ 184 (457)
....++++...+|+++|++.+. .+.++|++||++|++.|++... ++.++|..+..+|+.+..+++++
T Consensus 126 -~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~sls 204 (504)
T PLN02760 126 -SFWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLS 204 (504)
T ss_pred -cccccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhcc
Confidence 1223468889999999999853 3468899999999999998763 34568888999999999888877
Q ss_pred CCeE------------EEecCC----------C--------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC
Q psy15447 185 RCKV------------QYFKHN----------N--------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC 234 (457)
Q Consensus 185 g~~~------------~~~~~~----------d--------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~ 234 (457)
|... ...+.+ + .+++++.+.+.. ++++++|++||+++++|.+.
T Consensus 205 g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~-------~~~iAAvI~EPv~g~gG~~~ 277 (504)
T PLN02760 205 GLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEG-------PETIAAFIAEPVMGAGGVIP 277 (504)
T ss_pred CChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcC-------CCceEEEEECCccCCCCCcC
Confidence 6421 111111 1 134666554321 25689999999999999998
Q ss_pred C----hHHHHHHHHHcCcEEEEEcCc-ccccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHH
Q psy15447 235 P----LKDILSLRSKYQARIFVDESV-SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEH 306 (457)
Q Consensus 235 ~----l~~i~~l~~~~g~~li~DEa~-~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~ 306 (457)
| +++|+++|++||++||+||++ ++|++|. .+..+++|+.| ||+ +|+|++|+ +.|++++++++++.
T Consensus 278 p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~--~~a~e~~gv~P---Div--tlgK~lggG~~PigAv~~~~~i~d~ 350 (504)
T PLN02760 278 PPATYFEKIQAVLKKYDILFIADEVICAFGRLGT--MFGCDKYNIKP---DLV--SLAKALSSAYMPIGAVLVSPEISDV 350 (504)
T ss_pred CCHHHHHHHHHHHHHcCCEEEecchhhCCcccch--hhHHHhcCCCC---cEE--EecccccCCccccceEeecHHHHhh
Confidence 8 999999999999999999998 6877775 33468899988 676 89999964 45778899999988
Q ss_pred HHhh-------CCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEE
Q psy15447 307 HRLS-------GSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLY 379 (457)
Q Consensus 307 ~~~~-------~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~ 379 (457)
+... .++++| +.+|++|++++++|++++++ ++.+++++++++|++.|+++... ++.......+.++.+.
T Consensus 351 ~~~~~~~~~~~~h~~T~--~gnPl~~Aaala~Le~i~~~-~l~~~~~~~g~~l~~~L~~l~~~-~~v~~vrG~Gl~~gie 426 (504)
T PLN02760 351 IHSQSNKLGSFAHGFTY--SGHPVSCAVALEALKIYKER-NIPEHVNKIAPRFQDGIKAFSGS-PIIGEIRGTGLILGTE 426 (504)
T ss_pred hhcccccccCcccCCCC--CCCHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHhcC-CCeeeEEeCceEEEEE
Confidence 7532 233344 45999999999999999876 58999999999999999874222 2211123557788887
Q ss_pred ecCCcch----HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 380 LQKSDDE----VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 380 ~~~~~~~----~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+.++... .........+.+.|+++||++.+. .+.+|++|++.+|++|||+++++++++++.+.
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----------g~~lrl~Ppl~it~eeid~~~~~l~~al~~~~ 493 (504)
T PLN02760 427 FVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVA----------GDNIMMSPPLIITPEEVDELISIYGKALKATE 493 (504)
T ss_pred EecCCcccccccchhHHHHHHHHHHHhCCcEEEec----------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7543211 111223567889999999998653 25799999999999999999999999988764
No 23
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=8.5e-44 Score=352.57 Aligned_cols=348 Identities=17% Similarity=0.211 Sum_probs=275.9
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeec---CCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFAT---HNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s---~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|.++++++|.|+|+ ||++||||.+ ++++|+. ||+|.+|+.+|+++......+ ..++.+.+|+++|+++.
T Consensus 17 ~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~-~p~v~~a~~~~~~~~~~~~~~-----~~~~~~~~la~~L~~~~ 90 (397)
T TIGR03246 17 APFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHA-HPELVKALIEQADKLWHIGNG-----YTNEPVLRLAKKLVDAT 90 (397)
T ss_pred CCceEEEeecCEEEeCCCCEEEECCcCHhhccCCCC-CHHHHHHHHHHHHhcccccCc-----cCCHHHHHHHHHHHhhC
Confidence 478899999999995 9999999988 5789995 999999999999984322111 24778899999999999
Q ss_pred CCCcEEEecccHHHHHHHHHhh---------cCCCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCCCHH
Q psy15447 139 GLEETALYSFGFSTSASAIAAY---------VKRNDAVFVDENINFAIQTGLIASRC------------KVQYFKHNNMQ 197 (457)
Q Consensus 139 g~~~~i~~~sG~~a~~~ai~a~---------~~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~d~~ 197 (457)
+.+++++++||++|++.|++.. .++.++|..+..+|+++..++.+++. .+..+++||++
T Consensus 91 ~~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 170 (397)
T TIGR03246 91 FADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLA 170 (397)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHH
Confidence 8889999999999999999875 35667888999999998888777653 34578899999
Q ss_pred HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-cccc
Q psy15447 198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYF 272 (457)
Q Consensus 198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~ 272 (457)
++++.+. +++++|++||+++++|.+.| +++|+++|++||+++|+||+|. |. |++|.++ .+++
T Consensus 171 ~l~~~l~-----------~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~-Gr~G~~~a~~~~ 237 (397)
T TIGR03246 171 AAKALIS-----------DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQT-GV-GRTGELYAYMHY 237 (397)
T ss_pred HHHHHhc-----------cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-cC-Cccccchhhhhc
Confidence 9998884 25789999999999897753 8999999999999999999983 32 6666654 4778
Q ss_pred CCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Q psy15447 273 GVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCN 350 (457)
Q Consensus 273 ~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~ 350 (457)
++.| |++ |++|++|+ +.|++++++++++.+....+..+|+ .+|+.+++++++|+.+++ +++.++++++++
T Consensus 238 gv~p---Di~--t~~K~lggG~pigav~~~~~i~~~~~~~~~~~t~~--~~p~~~aaa~a~l~~~~~-~~l~~~~~~~~~ 309 (397)
T TIGR03246 238 GVTP---DIL--TSAKALGGGFPIGAMLTTTEIAAHLKVGTHGTTYG--GNPLACAVAGKVLDLVNT-PELLAGVKQRHD 309 (397)
T ss_pred CCCC---CEE--EeehhhhCCcceeEEEEcHHHHHhccCCCcCCCCC--CCHHHHHHHHHHHHHHhh-ccHHHHHHHHHH
Confidence 8877 676 89999962 3477888999988886544444443 589999999999998865 458899999999
Q ss_pred HHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecC
Q psy15447 351 TMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNI 430 (457)
Q Consensus 351 ~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~ 430 (457)
++++.|+++....++....+..+.++.+.+.++. ......+++.|+++|+++.+.. .+++|++|++
T Consensus 310 ~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~-----~~~~~~~~~~l~~~Gv~~~~~g---------~~~lR~~p~~ 375 (397)
T TIGR03246 310 LFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAY-----QGKAKQFVNAAAEEGVIALIAG---------PNVVRFAPSL 375 (397)
T ss_pred HHHHHHHHHHhcCCCeEeeecCceEEEEEEcCch-----hhHHHHHHHHHHHCCeEEeecC---------CCEEEEeCCC
Confidence 9999998743111211112345677777765421 0145689999999999987532 3789999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHh
Q psy15447 431 SHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 431 ~~t~edi~~~~~~l~~~~~~~ 451 (457)
.+|++||++++++|+++++.+
T Consensus 376 ~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 376 VISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred CCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988764
No 24
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=100.00 E-value=9e-43 Score=342.62 Aligned_cols=358 Identities=28% Similarity=0.466 Sum_probs=299.5
Q ss_pred eecCCCcEEEECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEe
Q psy15447 67 VDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALY 146 (457)
Q Consensus 67 i~~~~g~~~~~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~ 146 (457)
..+++|.++..+|+++|||++++++|+..+|++.+++.+++++|+.+...++..+|..+...++++.++++++.+..+++
T Consensus 3 ~~~~~~~~~~~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~ 82 (360)
T TIGR00858 3 LDRGPGPEVVRDGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTEAALLF 82 (360)
T ss_pred cccCCCCeEEECCceEEecccCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCCEEEE
Confidence 46889999999999999999998888878899999999999988876655666677788899999999999998889999
Q ss_pred cccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447 147 SFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV 226 (457)
Q Consensus 147 ~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v 226 (457)
++|++++..++.+++++||.|+++.++|.....+++..|.++..++..|++++++.+++.. ..++++|+++++
T Consensus 83 ~~G~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~-------~~~~~~v~~~~~ 155 (360)
T TIGR00858 83 SSGYLANVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRHNDVEHLERLLEKNR-------GERRKLIVTDGV 155 (360)
T ss_pred CchHHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecCCCHHHHHHHHHHcc-------cCCCeEEEEeCC
Confidence 9999998888888899999999999999999999999999999898899999999887532 124688999999
Q ss_pred CCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHH
Q psy15447 227 YMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEH 306 (457)
Q Consensus 227 ~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~ 306 (457)
++++|.+.|+++|.++|++||+++|+||+|+.|.++..+.+....+++.+++.||+++|+||++|+.|||+++++++++.
T Consensus 156 ~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~gG~~~~~~~~~~~ 235 (360)
T TIGR00858 156 FSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYGAYVAGSQALIDY 235 (360)
T ss_pred ccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccCcEEEcCHHHHHH
Confidence 99999999999999999999999999999998877665555556667766677899999999999889999999998888
Q ss_pred HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch
Q psy15447 307 HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE 386 (457)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 386 (457)
+......+.++++.++..++++.++++.+...++++++++++.+++.+.|++ .++.+. ++.++++++.++...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~-~~~~~~~~~~~~~~~-- 308 (360)
T TIGR00858 236 LINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEA----LGFTLM-PSCTPIVPVIIGDNA-- 308 (360)
T ss_pred HHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH----cCCccC-CCCCCEEEEEeCCHH--
Confidence 7655444555555678877888888887765556789999999999999988 455554 456788888876432
Q ss_pred HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447 387 VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLC 445 (457)
Q Consensus 387 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 445 (457)
...+++++|.++||++.+..++.. +.+.+++|++++..+|++|+++++++|+
T Consensus 309 -----~~~~~~~~l~~~gI~v~~~~~~~~--~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 309 -----SALALAEELQQQGIFVGAIRPPTV--PAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred -----HHHHHHHHHHHCCeeEeeeCCCCC--CCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 456799999999999987544321 2234689999999999999999999874
No 25
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=4.7e-42 Score=342.02 Aligned_cols=385 Identities=28% Similarity=0.468 Sum_probs=310.5
Q ss_pred hHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEE-CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCC
Q psy15447 38 NVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNI-NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCG 116 (457)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~-~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~ 116 (457)
.+++.++.....+.+.. +..+++++|.++|+ +|++++||++++++++..+|++.+++.+++++++.+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~ 78 (397)
T PRK06939 8 QLREELEEIKAEGLYKE---------ERVITSPQGADITVADGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMAS 78 (397)
T ss_pred HHHHHHHHHHHcCCCcc---------cccccCCCCceEEecCCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcc
Confidence 34555555555555542 34578899999996 999999999999899988999999999999987766666
Q ss_pred CCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCH
Q psy15447 117 PRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNM 196 (457)
Q Consensus 117 ~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~ 196 (457)
++...|..+.+.++++.+++++|.+..+++++|++++..++.+++++||.|+++.++|.+...++...+.++..++++|+
T Consensus 79 ~~~~~G~~~l~~~l~~~la~~~g~~~~i~~tsG~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 158 (397)
T PRK06939 79 VRFICGTQDLHKELEEKLAKFLGTEDAILYSSCFDANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYANNDM 158 (397)
T ss_pred cccccCCcHHHHHHHHHHHHHhCCCcEEEEcChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCCCCH
Confidence 67777889999999999999999888899999999999999999999999999999999999999999999988988999
Q ss_pred HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC
Q psy15447 197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST 276 (457)
Q Consensus 197 ~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~ 276 (457)
+++++.+++... +..++++|+++++++++|.+.++++|+++|++||++||+||+|++|.++..+.+....+++.
T Consensus 159 ~~l~~~i~~~~~-----~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~- 232 (397)
T PRK06939 159 ADLEAQLKEAKE-----AGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVM- 232 (397)
T ss_pred HHHHHHHHhhhc-----cCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCC-
Confidence 999998865321 01356788899999999999999999999999999999999998776665554444445554
Q ss_pred CCccEEEecCcccc-cCcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Q psy15447 277 EEVDMIIGSLEHAL-GSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSL 355 (457)
Q Consensus 277 ~~~Di~~~s~sK~l-g~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~ 355 (457)
+++|++++|+||++ |..|||+++++++++.++.....+.++++.++..++++.++++.+.+.++++++++++.+++.+.
T Consensus 233 ~~~~i~~~S~sK~~~g~r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~ 312 (397)
T PRK06939 233 DRVDIITGTLGKALGGASGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREG 312 (397)
T ss_pred CCCcEEEEECHHHhCccCceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 35689999999999 66789999999999988765555556666677777888888887765556788999999999999
Q ss_pred hhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447 356 LSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQ 435 (457)
Q Consensus 356 L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e 435 (457)
|++ .+++.. .+.+.++.+.+.... ...++++.|.++||.+.+..++.. +...+++|++++..++++
T Consensus 313 L~~----~~~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~L~~~gI~v~~~~~~~~--~~~~~~iRi~~~~~~~~~ 378 (397)
T PRK06939 313 MTA----AGFTLG-PGEHPIIPVMLGDAK-------LAQEFADRLLEEGVYVIGFSFPVV--PKGQARIRTQMSAAHTKE 378 (397)
T ss_pred HHH----cCCCcC-CCCCCEEEEEECCHH-------HHHHHHHHHHHCCceEeeeCCCCC--CCCCceEEEEECCCCCHH
Confidence 988 455543 344566655554322 456899999999999886554321 223468999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy15447 436 DMNSLIETLCKSHDIA 451 (457)
Q Consensus 436 di~~~~~~l~~~~~~~ 451 (457)
|+++++++|+++++..
T Consensus 379 ~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 379 QLDRAIDAFEKVGKEL 394 (397)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999988754
No 26
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=1.8e-42 Score=346.93 Aligned_cols=361 Identities=15% Similarity=0.130 Sum_probs=267.6
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+|+| .|||+||||.++ ..+|+ +||+|.+|+.+|+++++..+ ..+.++++.+.+|+++|++++
T Consensus 36 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~hp~v~~A~~~q~~~~~~~~---~~~~~~~~~~~~lae~L~~~~ 111 (460)
T PRK12403 36 GPRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGY-GRKDLAAAAARQMEQLPYYN---MFFHTTHPAVIELSELLFSLL 111 (460)
T ss_pred CCceEEeceeeEEEeCCCCEEEECchhHHhhcCCC-CCHHHHHHHHHHHHhCCCee---cccccCCHHHHHHHHHHHHhC
Confidence 47899999999999 599999999764 34677 58999999999999976432 233456889999999999998
Q ss_pred C--CCcEEEecccHHHHHHHHHhhc------C-CCCE--EEEeCcccHHHHHHHHhcCCe-----------EEEecCC--
Q psy15447 139 G--LEETALYSFGFSTSASAIAAYV------K-RNDA--VFVDENINFAIQTGLIASRCK-----------VQYFKHN-- 194 (457)
Q Consensus 139 g--~~~~i~~~sG~~a~~~ai~a~~------~-~gd~--v~~~~~~h~~~~~~~~~~g~~-----------~~~~~~~-- 194 (457)
+ .+++++++||++|++.|++... + +++. |.....+|+++..++++++.. +..++.+
T Consensus 112 p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~ 191 (460)
T PRK12403 112 PGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYW 191 (460)
T ss_pred CCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcc
Confidence 7 5789999999999999998764 2 2233 345677899999988877633 1222211
Q ss_pred -----C----------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcC
Q psy15447 195 -----N----------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDES 255 (457)
Q Consensus 195 -----d----------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa 255 (457)
+ .+++++.+.+.. ++.+++|++||+++.+|.+.| +++|+++|++||++||+||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~le~~~~~~~-------~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV 264 (460)
T PRK12403 192 YANGGELTPAEFGRRAALQLEEKILELG-------AENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEV 264 (460)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHHhC-------CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 1 244555554321 256889999999999999877 99999999999999999999
Q ss_pred cccccccCCCCcc-ccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcc--eecCCCcHHHHHHHH
Q psy15447 256 VSFGTLGSTGHGV-TEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGY--CFSASLPPFLAVAAN 329 (457)
Q Consensus 256 ~~~g~~g~~g~~~-~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~aaa~ 329 (457)
++. +|++|.++ .+++|+.| ||+ +++|++|+ +.|.+++++++++.+......+ ..+.+.+|++|++++
T Consensus 265 ~tG--fGRtG~~~a~e~~gv~P---Div--~~gK~lggG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaal 337 (460)
T PRK12403 265 IGG--FGRTGEWFAHEHFGFEP---DTL--SIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAI 337 (460)
T ss_pred ccC--CCcCchhhhhhhcCCCC---CeE--EEcccccccccceEEEEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHH
Confidence 842 45666664 48899988 787 69999962 3456678888888875432222 233346999999999
Q ss_pred HHHHHHhhCcHHHHHHH-HHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHHHHHcC
Q psy15447 330 KALHLLKANPSLLTKLR-EKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDMCIQAG 404 (457)
Q Consensus 330 a~l~~~~~~~~~~~~l~-~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l~~~G 404 (457)
++|+++++++ +.++++ ++.++|++.|+++....++....+..+.++.+.+..+... .........+.+.++++|
T Consensus 338 a~L~~i~~~~-l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 416 (460)
T PRK12403 338 ANLKALRDEG-VVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEG 416 (460)
T ss_pred HHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCC
Confidence 9999998764 789996 8999999988764211222222245688888887543211 000112445777889999
Q ss_pred eeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 405 FAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 405 i~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+++.+.. +.+|++|++++|++|+++++++++++++++.
T Consensus 417 ll~~~~~----------~~~~l~Ppl~it~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 417 VIIRSTL----------GRMIMAPALVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred EEEEecC----------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9986432 4699999999999999999999999998874
No 27
>PRK07505 hypothetical protein; Provisional
Probab=100.00 E-value=5.2e-42 Score=341.22 Aligned_cols=357 Identities=21% Similarity=0.344 Sum_probs=274.5
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcC-CCCCCCCCcccChHHHHHHHHHHHhhcCC
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNG-VGSCGPRGFYGTNVVHLDLENDIASFMGL 140 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~-~~~~~~~~~~g~~~~~~~l~~~la~~~g~ 140 (457)
+++.+++++|+++| .||++||||++++++|+.+||+|.+|+.+++++++ .+++.++.. ...+.+.+++++|++++|.
T Consensus 28 ~~~~~~~~~G~~~~d~~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~-~~~~~~~~l~~~la~~~~~ 106 (402)
T PRK07505 28 NGLTVGEREGILITLADGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTR-VRSQILKDLEEALSELFGA 106 (402)
T ss_pred ccceeeccCCccEEecCCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchh-hhhHHHHHHHHHHHHHhCC
Confidence 45789999999999 59999999999999997779999999999999987 344444332 2577899999999999998
Q ss_pred CcEEEecccHHHHHHHHHhhc------CCCCEEEEeCcccHHHHH--HHHhcCCeEEEecCCCHHHHHHHHHhhchhccc
Q psy15447 141 EETALYSFGFSTSASAIAAYV------KRNDAVFVDENINFAIQT--GLIASRCKVQYFKHNNMQHLEELLRQQDERDTL 212 (457)
Q Consensus 141 ~~~i~~~sG~~a~~~ai~a~~------~~gd~v~~~~~~h~~~~~--~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~ 212 (457)
++++++||++|++.+++... +++++|+.+..+|+++.. +....+.++..++++|++++++.++.
T Consensus 107 -~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~~d~~~l~~~~~~------- 178 (402)
T PRK07505 107 -SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDHNDLDALEDICKT------- 178 (402)
T ss_pred -CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCCCCHHHHHHHHhc-------
Confidence 88999999999999987643 345678888899998642 33334578889999999999988753
Q ss_pred CCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccc-cccCC-CCCCccEEEecCcccc
Q psy15447 213 NSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVT-EYFGV-STEEVDMIIGSLEHAL 290 (457)
Q Consensus 213 ~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~-~~~~~-~~~~~Di~~~s~sK~l 290 (457)
.++.+++++|++ ++|.+.|+++|+++|++||++||+||+|+++.+|++|.+.. ++++. .+ +.+++++|++|++
T Consensus 179 ---~~~~~vl~~p~~-~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~-d~~i~~~s~sK~~ 253 (402)
T PRK07505 179 ---NKTVAYVADGVY-SMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLN-ERTIIAASLGKAF 253 (402)
T ss_pred ---CCCEEEEEeccc-ccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCC-CCeEEEEechhhh
Confidence 235677777655 88999999999999999999999999998877888777643 56775 44 3357889999999
Q ss_pred cCcccEEE-ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEE
Q psy15447 291 GSVGGFCV-GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLV 367 (457)
Q Consensus 291 g~~gG~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~ 367 (457)
|+.||+++ +++++++.++....+++|+++.++.+++++.++++.+.++ .++.++++++.+.+...+.. . .
T Consensus 254 ~~~Gg~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~---~ 326 (402)
T PRK07505 254 GASGGVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPT----E---Q 326 (402)
T ss_pred hccCeEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHh----c---C
Confidence 98889976 4788888888777888898888889999999999866543 34455565555554433222 1 1
Q ss_pred eccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 368 QGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 368 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
. ....++.++.+++.. ...++.+.|+++||++++..+|.. +.+.+++||++++.+|++|+++++++|+++
T Consensus 327 ~-g~~~~i~~~~~~~~~-------~~~~~~~~l~~~Gi~v~~~~~p~~--~~~~~~lRi~~~~~~t~eei~~~~~~l~~~ 396 (402)
T PRK07505 327 S-GSFLPIRLIYIGDED-------TAIKAAKQLLDRGFYTSPVFFPVV--AKGRAGLRIMFRASHTNDEIKRLCSLLKEI 396 (402)
T ss_pred C-CCCCCEEEEEeCCHH-------HHHHHHHHHHHCCCeEeeecCCCC--CCCCceEEEecCccCCHHHHHHHHHHHHHH
Confidence 1 122333344443322 456799999999999988765432 223478999999999999999999999998
Q ss_pred HHH
Q psy15447 448 HDI 450 (457)
Q Consensus 448 ~~~ 450 (457)
+++
T Consensus 397 l~~ 399 (402)
T PRK07505 397 LDE 399 (402)
T ss_pred HHh
Confidence 754
No 28
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=9.2e-43 Score=343.31 Aligned_cols=343 Identities=17% Similarity=0.199 Sum_probs=269.0
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeec---CCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFAT---HNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s---~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|.++++++|+|+|+ |||+||||.+ ++++|++ ||+|.+|+.+|+.+....+. . ..+++..+|+++|++..
T Consensus 18 ~~~~~~~~~G~~~~d~dG~~~lD~~sg~~~~~lGh~-~p~v~~a~~~q~~~~~~~~~---~--~~~~~~~~la~~l~~~~ 91 (395)
T PRK03715 18 PDIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHC-NPGMVEALAAQAEKLINPSP---A--FYNEPMAKLAGLLTQHS 91 (395)
T ss_pred CCceEEeeecCEEEECCCCEEEECCcChhhccCCCC-CHHHHHHHHHHHHhcccccc---c--ccCHHHHHHHHHHhhcc
Confidence 367889999999995 9999999986 5778887 89999999999988543321 1 24677888999998877
Q ss_pred CCCcEEEecccHHHHHHHHHhhc--------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCCCHHH
Q psy15447 139 GLEETALYSFGFSTSASAIAAYV--------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHNNMQH 198 (457)
Q Consensus 139 g~~~~i~~~sG~~a~~~ai~a~~--------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~d~~~ 198 (457)
+.+++++++||++|++.|++... ++.++|..+..+|+++..++.+++.. +...+++|+++
T Consensus 92 ~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~ 171 (395)
T PRK03715 92 CFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIAS 171 (395)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHH
Confidence 77889999999999999998764 44568888999999999998887643 12234678899
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccccC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYFG 273 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~~ 273 (457)
+++.+. +.+++|++||+++++|.+.| +++|+++|++||+++|+||+|+ | +|++|.++ .++++
T Consensus 172 l~~~l~-----------~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G-~GRtG~~~a~~~~g 238 (395)
T PRK03715 172 VEKLIT-----------DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-G-CGRTGTLFAYELSG 238 (395)
T ss_pred HHHHcC-----------CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCCCcchhhHhhcC
Confidence 988774 24689999999999999887 9999999999999999999997 4 67888875 48899
Q ss_pred CCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q psy15447 274 VSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNT 351 (457)
Q Consensus 274 ~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~ 351 (457)
+.| ||+ +++|++|+ +.|++++++++... ....+..+| +.+|+.|++++++|+++++ ++++++++++.++
T Consensus 239 v~P---Di~--t~gK~lg~G~p~~av~~~~~i~~~-~~~~~~~T~--~g~pl~~aaala~L~~l~~-~~l~~~~~~~g~~ 309 (395)
T PRK03715 239 IEP---DIM--TLGKGIGGGVPLAALLAKAEVAVF-EAGDQGGTY--NGNPLMTAVGVAVISQLLA-PGFLEGVRARGEY 309 (395)
T ss_pred CCC---cee--eehhhhhCCcceEEEEEccccccc-cCCCcCCCC--CCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 987 675 89999964 45777888887532 222222333 4589999999999999975 4589999999999
Q ss_pred HHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc---CeeEeccccCccccCCCCCeEEEEe
Q psy15447 352 MHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA---GFAITCPSHLDQEAKKQKPSIRITC 428 (457)
Q Consensus 352 l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~---Gi~v~~~~~~~~~~~~~~~~lRi~~ 428 (457)
|++.|+++....++..+ +..+.++.+.+.++ ....+.+.+.+. |+++.... .+.+||+|
T Consensus 310 l~~~L~~l~~~~~i~~v-rG~Glm~~i~l~~~--------~~~~~~~~~~~~~~~Gi~~~~~~---------~~~lR~~p 371 (395)
T PRK03715 310 LKEKLLELSEERGLEGE-RGEGLLRALLLGKD--------IGPQIVEKARDMQPDGLLLNAPR---------PNLLRFMP 371 (395)
T ss_pred HHHHHHHHhhcCCcCeE-EcceeEEEEEecCc--------hHHHHHHHHHhccCCCEEEeecC---------CCEEEEeC
Confidence 99999874322344322 45688999988754 223444445555 99986433 37899999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 429 NISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 429 ~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
++.+|++||++++++|+++++.+
T Consensus 372 ~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 372 ALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred CcccCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999998764
No 29
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=100.00 E-value=1e-41 Score=335.12 Aligned_cols=342 Identities=23% Similarity=0.359 Sum_probs=282.6
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhc-------CCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKN-------GVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFST 152 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~-------~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a 152 (457)
.+++||+||+|||+..+|.+.+++.+++++| |.+.++++.+.|..+.+.++|++||+++|.+.++++++|+.|
T Consensus 4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~~l~~~sG~~a 83 (370)
T PRK05937 4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPEAFIVPSGYMA 83 (370)
T ss_pred CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCeEEEECChHHH
Confidence 5799999999999999999999999999998 588889999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCC
Q psy15447 153 SASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD 232 (457)
Q Consensus 153 ~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~ 232 (457)
+...+..+.+++|.|+.+..+|.+++.+++........++++|++++++.++..... ++++.+|+++++++++|.
T Consensus 84 ~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~-----~~~~~~v~v~~v~s~~G~ 158 (370)
T PRK05937 84 NLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFRHNDLDHLESLLESCRQR-----SFGRIFIFVCSVYSFKGT 158 (370)
T ss_pred HHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEecCCCHHHHHHHHHhhhcc-----CCCcEEEEEecCCCCCCC
Confidence 988777777889999999999999999998876566778999999999999764310 134567889999999999
Q ss_pred CCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCC
Q psy15447 233 ICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGS 312 (457)
Q Consensus 233 i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~ 312 (457)
+.|+++|.++|++||+++++||+|+.|.+|.+|.++...++.. +.++++.|+||++|+.|+.+++.++..+.+.....
T Consensus 159 i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~--~~~~~~~tlsK~~g~~G~~vl~~~~~~~~~~~~~~ 236 (370)
T PRK05937 159 LAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYE--NFYAVLVTYSKALGSMGAALLSSSEVKQDLMLNSP 236 (370)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCC--CCcEEEEechhhhhcCceEEEcCHHHHHHHHHhCC
Confidence 9999999999999999999999999999999888776666653 33566789999999888777787777666665556
Q ss_pred cceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHH
Q psy15447 313 GYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKK 391 (457)
Q Consensus 313 ~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 391 (457)
++.|+++.+|..++++.++++++.+. +..+++++++.+++.+.|.. .+ .++..++.++..
T Consensus 237 ~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~----~~-------~~~~~~i~~~~~-------- 297 (370)
T PRK05937 237 PLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSS----AA-------PGCVQPIFLPGI-------- 297 (370)
T ss_pred CCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCC----CC-------CCCEEEEEeCCh--------
Confidence 67888878888888888999988654 34667888888888887754 11 122334445432
Q ss_pred HHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 392 LLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 392 ~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
....+.+.|.++||++....+| ..+.+|++++..+|++||++++++|+++++++..
T Consensus 298 ~~~~~~~~L~~~gi~v~~~~~~------~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~~ 353 (370)
T PRK05937 298 SEQELYSKLVETGIRVGVVCFP------TGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQK 353 (370)
T ss_pred hHHHHHHHHHHCCeeEEeeCCC------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 3457888899999998865543 2468999999999999999999999999877643
No 30
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-42 Score=343.88 Aligned_cols=359 Identities=14% Similarity=0.122 Sum_probs=278.6
Q ss_pred CceeeecCCC-cEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q psy15447 63 SKYVVDQKSG-YIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASF 137 (457)
Q Consensus 63 ~~~~i~~~~g-~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~ 137 (457)
.|+++.+++| .|||+ ||++||||.++ ..+|+. ||+|.+|+.+|+.+..+.+ + +..++...+|+++|++.
T Consensus 63 ~~~~~~~~~G~~~l~D~dG~~ylD~~~g~~~~~lGH~-~p~v~~Ai~~ql~~l~~~~---~--~~~~~~~~~lae~L~~~ 136 (459)
T PRK11522 63 YGAVEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHR-NPVVVSAVQNQLAKQPLHS---Q--ELLDPLRAMLAKTLAAL 136 (459)
T ss_pred CCeeEEeccCeEEEEECCCCEEEECCcCHHhhhcCCC-CHHHHHHHHHHHhhCcccc---c--ccCCHHHHHHHHHHHHh
Confidence 4678999999 99995 99999999775 345654 8999999999999864432 1 23578889999999998
Q ss_pred cC--CCcEEEecccHHHHHHHHHhhc---C---CCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCCCHH
Q psy15447 138 MG--LEETALYSFGFSTSASAIAAYV---K---RNDAVFVDENINFAIQTGLIASRCK------------VQYFKHNNMQ 197 (457)
Q Consensus 138 ~g--~~~~i~~~sG~~a~~~ai~a~~---~---~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~d~~ 197 (457)
++ .++++|++||++|++.|++... + +.++|.....+|+.+...+.+++.. +..++++|.+
T Consensus 137 ~p~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~ 216 (459)
T PRK11522 137 TPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIE 216 (459)
T ss_pred CCCCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHH
Confidence 75 4578899999999999998643 2 3457778889999988877766522 3356778999
Q ss_pred HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCc-ccccc
Q psy15447 198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHG-VTEYF 272 (457)
Q Consensus 198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~-~~~~~ 272 (457)
++++.+++... .++++++|++||+++++|.+.| +++++++|++||++||+||+++ | +|++|.+ ..+++
T Consensus 217 ~l~~~l~~~~~-----~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-G-~GRtG~~~a~e~~ 289 (459)
T PRK11522 217 AMRTALSECKK-----TGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQT-G-MGRTGKMFACEHE 289 (459)
T ss_pred HHHHHHHHhhc-----cCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEecccee-c-CCccchhhhhhcc
Confidence 99998865321 1246789999999999999887 9999999999999999999985 3 4666665 56889
Q ss_pred CCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHH
Q psy15447 273 GVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKC 349 (457)
Q Consensus 273 ~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~ 349 (457)
|+.| ||+ +++|++|. +.|++++++++++.+......+..+.+.+|++|++++++|++++++ ++.+++++++
T Consensus 290 gv~P---Div--t~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~-~l~~~~~~~g 363 (459)
T PRK11522 290 NVQP---DIL--CLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQ-NLPAQAEQKG 363 (459)
T ss_pred CCCC---CEE--EechhhhCCCccceeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcc-hHHHHHHHHH
Confidence 9988 776 89999973 3567777888877664222122223335999999999999999765 5889999999
Q ss_pred HHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe
Q psy15447 350 NTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC 428 (457)
Q Consensus 350 ~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~ 428 (457)
++|++.|+++.. .+.+-...+..+.++.+.+.++. ....+.+.|+++||++.+.. ...+.+|++|
T Consensus 364 ~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~~-------~~~~i~~~l~~~Gvl~~~~~-------~~~~~lr~~P 429 (459)
T PRK11522 364 DYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNE-------IGYNFASEMFRQRVLVAGTL-------NNAKTIRIEP 429 (459)
T ss_pred HHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCch-------HHHHHHHHHHHCCeEEEecC-------CCCCEEEEEC
Confidence 999999987431 12111111356888999887653 56679999999999987542 1247999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447 429 NISHTEQDMNSLIETLCKSHDIAVQP 454 (457)
Q Consensus 429 ~~~~t~edi~~~~~~l~~~~~~~~~~ 454 (457)
++.+|++|+|+++++|+++++++...
T Consensus 430 pl~~t~~~id~~l~~l~~~l~~~~~~ 455 (459)
T PRK11522 430 PLTLTIEQCEQVLKAARKALAAMRVS 455 (459)
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999887654
No 31
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=7.1e-42 Score=339.35 Aligned_cols=339 Identities=16% Similarity=0.150 Sum_probs=266.7
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+|+| .|||+||||.++ ..+|+. ||+|.+|+.++++++++.+. . ..++...+|+++|+++.
T Consensus 22 ~p~~~~~~~G~~l~d~~G~~~lD~~~g~~~~~lGh~-~p~v~~ai~~~~~~~~~~~~---~--~~~~~~~~l~~~l~~~~ 95 (396)
T PRK04073 22 LPIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHR-HPKIIQALKDQADKVTLTSR---A--FHSDQLGPWYEKVAKLT 95 (396)
T ss_pred CCceEEeeeecEEEECCCCEEEEcCCCHHhccCCCC-CHHHHHHHHHHHhhcccccc---c--cCCHHHHHHHHHHHhcC
Confidence 47789999999999 599999999765 235554 89999999999998765422 1 25688899999999999
Q ss_pred CCCcEEEecccHHHHHHHHHhhc-----------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCCC
Q psy15447 139 GLEETALYSFGFSTSASAIAAYV-----------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHNN 195 (457)
Q Consensus 139 g~~~~i~~~sG~~a~~~ai~a~~-----------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~d 195 (457)
+.+++++++||++|++.|++... ++.++|..+..+|+.+..++.+++.. +..++++|
T Consensus 96 ~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 175 (396)
T PRK04073 96 GKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGD 175 (396)
T ss_pred CCCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCCC
Confidence 98899999999999999998763 34457778889999988887766522 35678889
Q ss_pred HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-cc
Q psy15447 196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TE 270 (457)
Q Consensus 196 ~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~ 270 (457)
++++++.+. +++++|++||++|++|.+.| +++|+++|++||+++|+||+|+. +|++|..+ .+
T Consensus 176 ~~~l~~~i~-----------~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g--~g~~g~~~~~~ 242 (396)
T PRK04073 176 LEALKAAIT-----------PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTG--LGRTGKLFACD 242 (396)
T ss_pred HHHHHHhcc-----------cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhC--CCcCcHHHHhh
Confidence 999988774 24689999999999999876 88999999999999999999873 45555543 35
Q ss_pred ccCCCCCCccEEEecCcccccCc---ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHH
Q psy15447 271 YFGVSTEEVDMIIGSLEHALGSV---GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLRE 347 (457)
Q Consensus 271 ~~~~~~~~~Di~~~s~sK~lg~~---gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~ 347 (457)
.+++.| |++ ++||++|++ .|++++++++++.+.......+| +.+|+.+++++++|+.+++. .+.++.++
T Consensus 243 ~~~~~p---di~--~~sK~lg~gg~~ig~~~~~~~i~~~~~~~~~~~t~--~~~~~~~aaa~aaL~~~~~~-~l~~~~~~ 314 (396)
T PRK04073 243 WDNVTP---DMY--ILGKALGGGVFPISCVAANRDILGVFTPGSHGSTF--GGNPLACAVSIAALEVLEEE-KLPERSLE 314 (396)
T ss_pred hcCCCC---CEE--EecccccCCCCcceEEEEcHHHHhhhcCCCCCCCC--CCCHHHHHHHHHHHHHHHhc-CHHHHHHH
Confidence 567665 666 799999754 48999999999887643333333 45999999999999988654 47788999
Q ss_pred HHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEE
Q psy15447 348 KCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRIT 427 (457)
Q Consensus 348 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~ 427 (457)
+++++.+.|+++. .+.+... ++.+.++++.+.. ...+++++|+++||++.+.. ++++||+
T Consensus 315 ~~~~l~~~L~~l~-~~~i~~~-~~~g~~~~~~~~~---------~~~~~~~~l~~~Gv~~~~~~---------~~~iRi~ 374 (396)
T PRK04073 315 LGEYFKEQLKEID-NPMIKEV-RGRGLFIGVELNE---------PARPYCEALKEEGLLCKETH---------ETVIRFA 374 (396)
T ss_pred HHHHHHHHHHhhc-CCcccce-ecceEEEEEEecc---------hHHHHHHHHHHCCeEEecCC---------CCEEEEE
Confidence 9999999998832 1223222 3456777777653 34578899999999987532 3689999
Q ss_pred ecCCCCHHHHHHHHHHHHHHH
Q psy15447 428 CNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 428 ~~~~~t~edi~~~~~~l~~~~ 448 (457)
|++.+|++|+++++++|++++
T Consensus 375 p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 375 PPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred CCcccCHHHHHHHHHHHHHHh
Confidence 999999999999999998875
No 32
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=1e-41 Score=337.89 Aligned_cols=352 Identities=14% Similarity=0.111 Sum_probs=270.1
Q ss_pred ceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447 64 KYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG 139 (457)
Q Consensus 64 ~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g 139 (457)
++++.+++|.|+|+ ||++||||.++ ..+|+. ||+|.+|+.+|+++..+.+ + +..++...+|+++|++.++
T Consensus 58 ~~~~~~~~g~~l~D~dG~~ylD~~~g~~~~~lGh~-hp~v~~Av~~ql~~l~~~~---~--~~~~~~~~~lAe~L~~~~p 131 (442)
T TIGR03372 58 AVEWQAGGLNTLIDTQGNEFIDCLGGFGIFNVGHR-NPNVIAAVENQLAKQPLHS---Q--ELLDPLRALLAKTLAALTP 131 (442)
T ss_pred eeEEEeCCeeEEEECCCCEEEECCccHHhhhcCCC-CHHHHHHHHHHHHhCCCcc---c--ccCCHHHHHHHHHHHHhCC
Confidence 44567788899995 99999999775 345654 8999999999999865432 1 2357888999999999875
Q ss_pred C--CcEEEecccHHHHHHHHHhhc------CCCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCCCHHHH
Q psy15447 140 L--EETALYSFGFSTSASAIAAYV------KRNDAVFVDENINFAIQTGLIASRC------------KVQYFKHNNMQHL 199 (457)
Q Consensus 140 ~--~~~i~~~sG~~a~~~ai~a~~------~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~d~~~l 199 (457)
. +.++|++||++|++.|++... ++.++|.....+|+.+...+.+++. .+..++++|.+.+
T Consensus 132 ~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~ 211 (442)
T TIGR03372 132 GKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAM 211 (442)
T ss_pred CCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHH
Confidence 3 567888999999999998643 3445777888899998887776542 2355678899998
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCc-cccccCC
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHG-VTEYFGV 274 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~-~~~~~~~ 274 (457)
++.+++... . +..+++|++||+++.+|.+.| +++++++|++||+++|+||+++ | +|++|.+ ..+++|+
T Consensus 212 ~~~l~~~~~----~-~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G-~GRtG~~~a~e~~gv 284 (442)
T TIGR03372 212 LKALNECKK----T-GDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT-G-MGRTGKMFACEHEGV 284 (442)
T ss_pred HHHHHHHhc----C-CCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeccc-C-CCccccchhhhhcCC
Confidence 888864321 0 256899999999999999888 9999999999999999999984 2 4666665 5688999
Q ss_pred CCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q psy15447 275 STEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNT 351 (457)
Q Consensus 275 ~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~ 351 (457)
.| ||+ +++|++|. +.|++++++++++.+......+..+.+.+|++|++++++|+++++++ +.++.++++++
T Consensus 285 ~P---Div--t~gK~lg~G~~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~-l~~~~~~~G~~ 358 (442)
T TIGR03372 285 QP---DIL--CLAKALGGGVMPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKN-LPAQAAIKGDF 358 (442)
T ss_pred CC---Cee--eehhhhcCCcccceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhcc-HHHHHHHHHHH
Confidence 88 777 79999963 45777888888887742211122233359999999999999997654 88999999999
Q ss_pred HHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecC
Q psy15447 352 MHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNI 430 (457)
Q Consensus 352 l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~ 430 (457)
+++.|+++.. .+..-...+..+.++.+.+.++. ....+++.|+++||++.+..+ ..+.+||.|++
T Consensus 359 l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~~-------~~~~i~~~l~~~Gvl~~~~~~-------~~~~lr~~Ppl 424 (442)
T TIGR03372 359 LLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDNE-------IGYAFAKELFQQNILVAGTLN-------NAKSIRIEPPL 424 (442)
T ss_pred HHHHHHHHHHhCCCceEEEecceEEEEEEeCChH-------HHHHHHHHHHHCCcEEeecCC-------CCCEEEEECCc
Confidence 9999987432 12111112456889999887653 556899999999999875432 24799999999
Q ss_pred CCCHHHHHHHHHHHHHHH
Q psy15447 431 SHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 431 ~~t~edi~~~~~~l~~~~ 448 (457)
.+|++|+|++++++++++
T Consensus 425 ~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 425 TITIEQCALVIKAAKDAL 442 (442)
T ss_pred ccCHHHHHHHHHHHHHhC
Confidence 999999999999998763
No 33
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=3e-41 Score=338.19 Aligned_cols=363 Identities=14% Similarity=0.114 Sum_probs=267.0
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|.|+| .|||+||||.++ ..+|++ ||+|.+|+.+|+++..+... .....++...+|+++|++..
T Consensus 32 ~p~~i~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~-~p~v~~Av~~q~~~~~~~~~---~~~~~~~~~~~lAe~L~~~~ 107 (461)
T PRK07482 32 PGRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGYG-RTEVAEAIAEQAKELAYYHT---YVGHGTEASITLSKRIIDRA 107 (461)
T ss_pred CCeeEEeeeeeEEEECCCCEEEEcccchhhhcCCCC-CHHHHHHHHHHHHhcCcccc---ccccCCHHHHHHHHHHHHhC
Confidence 47899999999999 599999999875 345554 89999999999998543221 11125788999999999987
Q ss_pred C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEe--cC
Q psy15447 139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYF--KH 193 (457)
Q Consensus 139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~--~~ 193 (457)
+ .++++|++||++|++.|++... ++..+|.....||+.+..+..+++.. +..+ ++
T Consensus 108 p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~ 187 (461)
T PRK07482 108 PAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPH 187 (461)
T ss_pred CCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCc
Confidence 4 5688999999999999998653 24457777889999887766655421 1111 11
Q ss_pred --C--------------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447 194 --N--------------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVD 253 (457)
Q Consensus 194 --~--------------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~D 253 (457)
+ +++++++.+.+.. ++++++|++||+++.+|.+.| +++|+++|++||++||+|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~D 260 (461)
T PRK07482 188 YYRRADAGMSEEQFSAYCADELEELILAEG-------PDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIAD 260 (461)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHHhcC-------CCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEe
Confidence 1 2456666664321 257899999999999898865 899999999999999999
Q ss_pred cCcc-cccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhh-----CCcceecCCCcHHH
Q psy15447 254 ESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLS-----GSGYCFSASLPPFL 324 (457)
Q Consensus 254 Ea~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 324 (457)
|+++ +|++|. .+..+++|+.| ||+ +++|++|+ +-|++++++++++.+... ...+.++.+.+|++
T Consensus 261 EV~tGfGRtG~--~~a~~~~gv~P---Div--~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~ 333 (461)
T PRK07482 261 EVVTGFGRLGS--MFGSDHYGIEP---DLI--TVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPIC 333 (461)
T ss_pred ccccCCCcCcc--hhhHHhcCCCC---CEE--EEccccccCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHH
Confidence 9974 555543 23468899988 787 79999953 346678888888876521 11122344469999
Q ss_pred HHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHHH
Q psy15447 325 AVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDMC 400 (457)
Q Consensus 325 ~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l 400 (457)
||+++++|+++++. ++.++.++++++|++.|+++....++....+..+.++.+.+..+... ........++++.|
T Consensus 334 ~Aaa~a~L~~~~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~ 412 (461)
T PRK07482 334 AAAALANLDILERE-NLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAA 412 (461)
T ss_pred HHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHH
Confidence 99999999999765 48899999999999999764211222222245678888888643210 11112356789999
Q ss_pred HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 401 IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 401 ~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+++|+++.+.. ..+.+|+.|++.+|++||++++++++++++++.
T Consensus 413 ~~~Gvl~~~~~--------~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~~ 456 (461)
T PRK07482 413 LERGVIARAMP--------HGDILGFAPPLVLTRAEADEIVAIAKDAVDEVL 456 (461)
T ss_pred HHCCcEEecCC--------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999985421 147899999999999999999999999998763
No 34
>KOG1402|consensus
Probab=100.00 E-value=1e-42 Score=311.36 Aligned_cols=372 Identities=17% Similarity=0.190 Sum_probs=295.1
Q ss_pred CCCChhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEE-CCeeeEEeec-CCccCCC-CChhhHHHHHHHHH
Q psy15447 32 HKKHTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNI-NGIPCINFAT-HNYLSFV-ENPDIEKCAIDCID 108 (457)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~-~G~~~id~~s-~~~l~~~-~~p~i~~a~~~~l~ 108 (457)
...+++++.++-.++..+.++| -|.++.+++|+++|+ +|++|+||.| .+..+-+ +||.|.+++++|.+
T Consensus 19 ~~~aS~~~~~~E~k~~ahnyhp---------Lpvvf~ka~g~~vwD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~ 89 (427)
T KOG1402|consen 19 NTTASQQIMERENKYGAHNYHP---------LPVVFSKAKGSRVWDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQAD 89 (427)
T ss_pred CccchhhhhchhhhcccccCCc---------CceEEEecCCcEEECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHh
Confidence 3345777777777777777777 588899999999995 9999999965 3444444 59999999999999
Q ss_pred hcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcC--------C-C--CEEEEeCcccHHH
Q psy15447 109 KNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVK--------R-N--DAVFVDENINFAI 177 (457)
Q Consensus 109 ~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~--------~-g--d~v~~~~~~h~~~ 177 (457)
+.-+. +|.+ .++...++++.+++++|.+.++-+++|.+|++.|++...+ | . .++.....+|+.+
T Consensus 90 kLtls---sraf--Ynd~~~~f~~~vt~lf~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT 164 (427)
T KOG1402|consen 90 KLTLS---SRAF--YNDVLGEFAEYVTKLFGYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRT 164 (427)
T ss_pred Hhhhh---hHHH--hhhhHHHHHHHHHHhcCcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCce
Confidence 86543 4444 3678889999999999999999999999999999987542 2 2 2455567789888
Q ss_pred HHHHHhcCCe-------------EEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHH
Q psy15447 178 QTGLIASRCK-------------VQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDIL 240 (457)
Q Consensus 178 ~~~~~~~g~~-------------~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~ 240 (457)
..++++++-+ +..++++|.++|+.++++ ++.+++++||+++..|.+.| |++++
T Consensus 165 ~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~d~eale~~l~~----------~~vaaFivEPIQGEaGVvvP~~GYL~~vr 234 (427)
T KOG1402|consen 165 LGAISLSTDPDSWDGFGPFLPGVVDKVPYGDAEALEVALKS----------PNVAAFIVEPIQGEAGVVVPPPGYLKKVR 234 (427)
T ss_pred eeeEEecCCcchhhccCCCCCCcceeeccCCHHHHHHHhcC----------CCeeEEEeeccccccceEeCCchhHHHHH
Confidence 8777766532 556788999999999986 67899999999999999977 89999
Q ss_pred HHHHHcCcEEEEEcCcccccccCCCCcc-ccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCccee
Q psy15447 241 SLRSKYQARIFVDESVSFGTLGSTGHGV-TEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGYCF 316 (457)
Q Consensus 241 ~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~~~ 316 (457)
+||++|++++|.||+|+. +|++|+.+ +++.++.| ||+ -|+|++++ +-..+.++++++..+.+..|+.+|
T Consensus 235 eLCtkynvl~I~DEvQTG--l~RTGk~la~d~env~P---Div--ilgKalSGG~~Pvsavl~~~~im~~~~pgeHgsTy 307 (427)
T KOG1402|consen 235 ELCTKYNVLLIADEVQTG--LARTGKLLACDYENVRP---DIV--ILGKALSGGVYPVSAVLADDDIMLNIKPGEHGSTY 307 (427)
T ss_pred HHHHhhcEEEEehhhhhc--ccccCcEEEeehhhcCC---CeE--EEeccccCCeeeeEEEEecHHHHhccCCCcccccc
Confidence 999999999999999964 67778765 47777877 787 49999962 114477888888888888888777
Q ss_pred cCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHH
Q psy15447 317 SASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQT 395 (457)
Q Consensus 317 ~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 395 (457)
++ ||++|++++++|+++.++ .+.++.+.++..|+.+|.+++. .+++--..+..+.+..+.+...... ...+.+
T Consensus 308 gg--NpLg~~vaiAalevi~ee-kL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~---~~~aw~ 381 (427)
T KOG1402|consen 308 GG--NPLGCAVAIAALEVIVEE-KLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTS---GQDAWD 381 (427)
T ss_pred CC--ChHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEecccccc---chhHHH
Confidence 76 999999999999999875 5899999999999999998542 1222222245677777766532211 126788
Q ss_pred HHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 396 ICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 396 ~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
+|-.|.++|++..+.+ .+.+||.||+.++++|+++.+++|.+++.
T Consensus 382 ~cl~lk~~g~LAkptH---------~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 382 VCLALKENGLLAKPTH---------GNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred HHHcccccccccCCCC---------CCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 9999999999877644 57999999999999999999999988763
No 35
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=3.1e-41 Score=337.19 Aligned_cols=359 Identities=15% Similarity=0.126 Sum_probs=270.0
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+||| .|||+||||.++ ..+|++ ||+|.+|+.+|+++..+... ...++...+|+++|+++.
T Consensus 35 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~q~~~~~~~~~-----~~~~~~~~~lae~L~~~~ 108 (451)
T PRK06062 35 NPMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQ-HPKVVAAIQEQAARLCTVAP-----AHANDARSEAARLIAERA 108 (451)
T ss_pred CCceEEeceeeEEEECCCCEEEEcccCHHhhcCCCC-CHHHHHHHHHHHHhcCCcCC-----ccCCHHHHHHHHHHHHhC
Confidence 47889999999999 499999999775 345654 89999999999998543321 125788899999999987
Q ss_pred C--CCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCCeE-----------EEe--cC-------
Q psy15447 139 G--LEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRCKV-----------QYF--KH------- 193 (457)
Q Consensus 139 g--~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~~~-----------~~~--~~------- 193 (457)
+ .++++|++||++|++.|++.. +++.++|.....+|+.+..++.+++... ..+ +.
T Consensus 109 p~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 188 (451)
T PRK06062 109 PGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFH 188 (451)
T ss_pred CCCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccC
Confidence 5 468899999999999999864 4667788889999999888877654211 111 11
Q ss_pred --CC-------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCccccc
Q psy15447 194 --NN-------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGT 260 (457)
Q Consensus 194 --~d-------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~ 260 (457)
+| +++++++++... ++++++|++||+++++|.+.| +++|+++|++||++||+||+++.
T Consensus 189 ~~~~~~~~~~~~~~le~~l~~~~-------~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tG-- 259 (451)
T PRK06062 189 ATTEEEECERALAHLERVIELEG-------PSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAG-- 259 (451)
T ss_pred CCChHHHHHHHHHHHHHHHHhcC-------CCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccC--
Confidence 23 456677665321 257899999999999999988 99999999999999999999863
Q ss_pred ccCCCCc-cccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh
Q psy15447 261 LGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK 336 (457)
Q Consensus 261 ~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~ 336 (457)
+|++|.+ ..+++|+.| ||+ +++|++|+ +.|++++++++++.+......+.++.+.+|++||+++++|++++
T Consensus 260 fGRtG~~~a~~~~gv~P---Di~--t~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~ 334 (451)
T PRK06062 260 FGRTGKWFAIEHFGVVP---DLI--TFAKGVNSGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAAVATINAME 334 (451)
T ss_pred CCcCcHHHHHHhcCCCC---Cee--eechhhhcCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 5666665 458899988 676 89999963 45677888889888753321222333458999999999999997
Q ss_pred hCcHHHHHHHHHH-HHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-------HHHHHHHHHHHHHHHHcCeeEe
Q psy15447 337 ANPSLLTKLREKC-NTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-------VASKKLLQTICDMCIQAGFAIT 408 (457)
Q Consensus 337 ~~~~~~~~l~~~~-~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~~l~~~Gi~v~ 408 (457)
+.+ +.+++++++ +++++.|+++....+........+.++.+.+..+... .........+.+.|+++||++.
T Consensus 335 ~~~-l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~ 413 (451)
T PRK06062 335 EEG-IVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPF 413 (451)
T ss_pred hcC-HHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEe
Confidence 764 889999998 5888888774321222111235677888877532110 0011235678999999999975
Q ss_pred ccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 409 CPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 409 ~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+. .+.+||+|++.+|++|||+++++++++++.+.
T Consensus 414 ~~----------~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~ 447 (451)
T PRK06062 414 VN----------GNRIHVVPPCTVTEDEVREGLAILDAALAVAD 447 (451)
T ss_pred ec----------CCEEEEECCccCCHHHHHHHHHHHHHHHHHhh
Confidence 42 36899999999999999999999999998764
No 36
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-41 Score=338.91 Aligned_cols=361 Identities=18% Similarity=0.214 Sum_probs=273.0
Q ss_pred ceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447 64 KYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG 139 (457)
Q Consensus 64 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g 139 (457)
|+++++++|+++| .|||+||||.++ ..+|+. ||+|.+|+.+|++++++.+.+. .+++.+.+|+++|+++++
T Consensus 26 ~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~-~p~v~~a~~~q~~~~~~~~~~~----~~~~~~~~la~~L~~~~~ 100 (433)
T PRK08117 26 NLPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGHR-HPKVVQAIKEQADKLMHGPSGV----IYYESILKLAEELAEITP 100 (433)
T ss_pred CceEEeeeeeEEEeCCCCEEEECCcchhhccCCCC-CHHHHHHHHHHHHhccCccccc----cCCHHHHHHHHHHHHhCC
Confidence 3789999999999 599999999875 356654 8999999999999876544222 157889999999999983
Q ss_pred --CCcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhcCCe-------------EEEecC--------
Q psy15447 140 --LEETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIASRCK-------------VQYFKH-------- 193 (457)
Q Consensus 140 --~~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~g~~-------------~~~~~~-------- 193 (457)
.+.++|++||++|++.|++. ++++.++|..+..+|+.+..++.+++.. +..++.
T Consensus 101 ~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (433)
T PRK08117 101 GGLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPK 180 (433)
T ss_pred CCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccc
Confidence 45677779999999999986 4567788899999999988876655310 112222
Q ss_pred ---------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCccccc
Q psy15447 194 ---------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGT 260 (457)
Q Consensus 194 ---------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~ 260 (457)
++++++++++++... ++.+++|++||+++++|.+.| +++|+++|++||++||+||+|+ |
T Consensus 181 ~~~~~~~~~~~~~~l~~~~~~~~~------~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G- 252 (433)
T PRK08117 181 GEDPEVCFLECLRDLESLFKHQVT------PEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-G- 252 (433)
T ss_pred cCchhHHHHHHHHHHHHHHHhccC------CCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-c-
Confidence 145567777654211 256899999999999999988 9999999999999999999997 4
Q ss_pred ccCCCCccc-cccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh
Q psy15447 261 LGSTGHGVT-EYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA 337 (457)
Q Consensus 261 ~g~~g~~~~-~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~ 337 (457)
+|++|.++. +++|+.| |++ |++|++|. +.|++++++++++.+....+..+| +.+|++|++++++|+.+++
T Consensus 253 ~gr~G~~~~~~~~gv~p---Di~--t~sK~lg~G~pigav~~~~~i~~~~~~~~~~~T~--~~np~~~aaa~a~L~~l~~ 325 (433)
T PRK08117 253 FGRTGEWFAAQTFGVVP---DIM--TIAKGIASGLPLSAVVASKELMEQWPLGSHGTTF--GGNPVACAAALATLEVIKE 325 (433)
T ss_pred cCccccchhHhhcCCCC---CEe--ehhhhccCCCcceeEEEcHHHHhhccCCCCCCCC--CcCHHHHHHHHHHHHHHHh
Confidence 677777654 7788877 665 99999973 357889999988877544333333 4599999999999999865
Q ss_pred CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc
Q psy15447 338 NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA 417 (457)
Q Consensus 338 ~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~ 417 (457)
. .+.++++++++++++.|+++....++....+..+.++++.+..+. ...+......+.+.|+++||++.+..
T Consensus 326 ~-~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~-~~~~~~~~~~~~~~l~~~Gv~~~~~g------ 397 (433)
T PRK08117 326 E-KLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPD-GEPDGDAVEKILDKCLEKGLLFYLCG------ 397 (433)
T ss_pred c-cHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCC-CCcchHHHHHHHHHHHHCCCEEeecC------
Confidence 5 588999999999999998743111221112345667777775432 10111245678899999999886543
Q ss_pred CCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 418 KKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 418 ~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
...+++|++|++.+|++||++++++|+++++++.+
T Consensus 398 -~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~ 432 (433)
T PRK08117 398 -NAGNVLRMIPPLTVTKEEIDEGLDILDEALTEYEA 432 (433)
T ss_pred -CCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHhc
Confidence 12479999999999999999999999999987654
No 37
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=2.3e-41 Score=338.94 Aligned_cols=360 Identities=14% Similarity=0.127 Sum_probs=270.9
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+|+| .|||+||||.++ ..+|+. ||+|.+|+.+|+++.++....+ ...++...+|+++|++++
T Consensus 30 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~i~~Ai~~q~~~~~~~~~~~---~~~~~~~~~lae~L~~~~ 105 (460)
T PRK06105 30 GPLVIERGEGIYVYDDAGKRYIEGMAGLWSVALGFS-EQRLVEAAARQMKKLPFYHTFS---HKSHGPVIDLAEKLVAMA 105 (460)
T ss_pred CCceEEeeeEEEEEECCCCEEEEcchhHHhccCCCC-CHHHHHHHHHHHHhCCCeeccc---ccCCHHHHHHHHHHHHhC
Confidence 47889999999999 599999999875 355664 8999999999999865422211 125788899999999987
Q ss_pred C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCCC
Q psy15447 139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHNN 195 (457)
Q Consensus 139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~d 195 (457)
+ .++++|++||++|++.|++... ++.++|.....+|+.+..++.+++.. +..+++++
T Consensus 106 p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~ 185 (460)
T PRK06105 106 PVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPH 185 (460)
T ss_pred CCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCc
Confidence 5 3578899999999999998742 35567778899999988776665422 11222211
Q ss_pred ------------------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447 196 ------------------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVD 253 (457)
Q Consensus 196 ------------------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~D 253 (457)
.+++++++.... ++++++||+||+++.+|.+.| +++|+++|++||++||+|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~le~~~~~~~-------~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~D 258 (460)
T PRK06105 186 YYRFGLPGESEEAFATRLANELEALILAEG-------PDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVAD 258 (460)
T ss_pred ccccccCCCChHHHHHHHHHHHHHHHHHcC-------CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEe
Confidence 245666664321 256899999999999998877 999999999999999999
Q ss_pred cCc-ccccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCC-----cceecCCCcHHH
Q psy15447 254 ESV-SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGS-----GYCFSASLPPFL 324 (457)
Q Consensus 254 Ea~-~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 324 (457)
|++ ++|++|. .+..+++++.| ||+ +++|++|+ +.|++++++++++.+..... .+.++.+.+|++
T Consensus 259 Ev~tG~GRtG~--~f~~~~~~v~P---Di~--~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~ 331 (460)
T PRK06105 259 EVICGFGRTGN--MFGCETFGIKP---DIL--VMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVA 331 (460)
T ss_pred ccccCCCcCch--hhhHHhcCCCC---Cee--eeecccccCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHH
Confidence 998 6766654 22457889988 777 89999963 47889999999888754211 133455579999
Q ss_pred HHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHHH
Q psy15447 325 AVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDMC 400 (457)
Q Consensus 325 ~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l 400 (457)
|++++++|+++++. ++.+++++++++|++.|+++...+.+ ...+..+.+..+.+..+... ........++...+
T Consensus 332 ~aaa~a~L~~i~~~-~l~~~v~~~g~~l~~~L~~l~~~~~v-~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~ 409 (460)
T PRK06105 332 AAVALENLAIIEER-DLVGNAAERGARLQARLRALADHPLV-GEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAA 409 (460)
T ss_pred HHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHhhcCCCe-EEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHH
Confidence 99999999999865 58999999999999999885322211 12245677888877533110 00112346788999
Q ss_pred HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 401 IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 401 ~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+++|+++.+. .+.+|++|++++|++|+|+++++++++++++.
T Consensus 410 ~~~Gvl~~~~----------g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (460)
T PRK06105 410 HEHGVISRAM----------GDTLAFCPPLIITAAQVDEMVDRFGRALDDVA 451 (460)
T ss_pred HHCCeEEEec----------CCEEEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence 9999998653 26899999999999999999999999998764
No 38
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=2.1e-41 Score=336.46 Aligned_cols=350 Identities=16% Similarity=0.178 Sum_probs=272.4
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeec---CCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFAT---HNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s---~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|.++++++|+|+| .||++||||.+ ++++|++ ||+|.+|+.+|+.++..... ...++.+.+|+++|+++.
T Consensus 21 ~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~-~p~v~~A~~~~~~~~~~~~~-----~~~~~~~~~la~~l~~~~ 94 (406)
T PRK12381 21 APFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHA-HPALREALNEQASKFWHTGN-----GYTNEPVLRLAKKLIDAT 94 (406)
T ss_pred CCceEEEeecCEEEeCCCCEEEEcCcCHhhccCCCC-CHHHHHHHHHHHhhcccccC-----ccCCHHHHHHHHHHHhhC
Confidence 46789999999999 59999999987 4788987 99999999999987533221 124678899999999998
Q ss_pred CCCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCCCHH
Q psy15447 139 GLEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRC------------KVQYFKHNNMQ 197 (457)
Q Consensus 139 g~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~d~~ 197 (457)
+.+++++++||++|++.|++... ++.++|..+..+|+.+..++.+++. .+..++++|++
T Consensus 95 ~~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 174 (406)
T PRK12381 95 FADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLN 174 (406)
T ss_pred CCCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHH
Confidence 88899999999999999998752 4456778899999999877777663 24567889999
Q ss_pred HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-cccc
Q psy15447 198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYF 272 (457)
Q Consensus 198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~ 272 (457)
++++.+. +++++|++||+++++|.+.| +++|+++|++||++||+||+|. | +|++|.++ .+++
T Consensus 175 ~l~~~l~-----------~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G-~gr~G~~~~~~~~ 241 (406)
T PRK12381 175 SASALID-----------DQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQT-G-VGRTGELYAYMHY 241 (406)
T ss_pred HHHHhcc-----------CCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhh-C-CCCCcchhhhHhh
Confidence 9998874 25689999999988886643 8999999999999999999984 3 35556554 3677
Q ss_pred CCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Q psy15447 273 GVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCN 350 (457)
Q Consensus 273 ~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~ 350 (457)
++.| |++ |++|++|+ +.|++++++++++.+....+..+| +.+|+.++++.++|+++++ ++++++++++.+
T Consensus 242 ~v~p---Di~--t~sK~l~gG~~ig~~~~~~~~~~~~~~~~~~~t~--~~~pl~~aaa~a~l~~l~~-~~~~~~~~~~~~ 313 (406)
T PRK12381 242 GVTP---DVL--TTAKALGGGFPIGAMLTTEKCASVMTVGTHGTTY--GGNPLASAVAGKVLELINT-PEMLNGVKQRHD 313 (406)
T ss_pred CCCC---CEE--EehhhhhCCCceEEEEEcHHHHhhcCCCCCCCCC--CCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHH
Confidence 8876 664 99999962 347888999999887644433333 4599999999999998864 358899999999
Q ss_pred HHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecC
Q psy15447 351 TMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNI 430 (457)
Q Consensus 351 ~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~ 430 (457)
++++.|+++....++....+..+.++++.+..+.. .....+.+.|+++||++.+.. ++.+||+|++
T Consensus 314 ~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~-----~~~~~~~~~l~~~Gv~v~~~g---------~~~lRl~p~~ 379 (406)
T PRK12381 314 WFVERLNTINARYGLFSEIRGLGLLIGCVLNAEYA-----GKAKQISQEAAKAGVMVLIAG---------PNVVRFAPAL 379 (406)
T ss_pred HHHHHHHHHHhhCCCEEEEecCeEEEEEEecCchh-----hHHHHHHHHHHHCCcEEeeCC---------CCEEEEeCCc
Confidence 99999987421111111113456777777754310 145678899999999986532 3689999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 431 SHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 431 ~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
.+|++|+++++++|+++++++..
T Consensus 380 ~~t~~~i~~~~~~l~~~l~~~~~ 402 (406)
T PRK12381 380 NISEEEITTGLDRFARACERFVS 402 (406)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999987643
No 39
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=2.1e-41 Score=335.45 Aligned_cols=346 Identities=14% Similarity=0.103 Sum_probs=265.6
Q ss_pred ceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447 64 KYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG 139 (457)
Q Consensus 64 ~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g 139 (457)
|+++++++|+++|+ |||+||||.++ ..+|++ ||+|.+|+.+|+++..+... ....++...+|+++|++..+
T Consensus 26 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~i~~Ai~~q~~~~~~~~~----~~~~~~~~~~la~~L~~~~p 100 (428)
T PRK07986 26 VYPVVSAEGCELILADGRRLVDGMSSWWAAIHGYN-HPQLNAAMKSQIDAMSHVMF----GGITHPPAIELCRKLVAMTP 100 (428)
T ss_pred CeeEEeeeeeEEEeCCCCEEEEcchhHHhhcCCCC-CHHHHHHHHHHHhhcCCccc----cccCCHHHHHHHHHHHhhCC
Confidence 46799999999994 99999999875 355665 89999999999998653221 11257888999999999875
Q ss_pred --CCcEEEecccHHHHHHHHHhhc--------CCCCEEEEeCcccHHHHHHHHhcCCe-------------EEEe-----
Q psy15447 140 --LEETALYSFGFSTSASAIAAYV--------KRNDAVFVDENINFAIQTGLIASRCK-------------VQYF----- 191 (457)
Q Consensus 140 --~~~~i~~~sG~~a~~~ai~a~~--------~~gd~v~~~~~~h~~~~~~~~~~g~~-------------~~~~----- 191 (457)
.+++++++||++|++.|++... ++.++|.....+|+.+..++.+++.. +...
T Consensus 101 ~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~ 180 (428)
T PRK07986 101 QPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQS 180 (428)
T ss_pred CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCc
Confidence 4678899999999999998643 34567888999999887776664421 1111
Q ss_pred ------cCCCHHHHHHHHHhhchhcccCCCCccEEEEEecC-CCCCCCCCC----hHHHHHHHHHcCcEEEEEcCccccc
Q psy15447 192 ------KHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV-YMNSADICP----LKDILSLRSKYQARIFVDESVSFGT 260 (457)
Q Consensus 192 ------~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v-~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~ 260 (457)
+++|++++++.+++.. +.+++|++||+ ++.+|.+.| |++|+++|++||++||+||++ .|
T Consensus 181 ~~~~~~~~~d~~~l~~~l~~~~--------~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~-tG- 250 (428)
T PRK07986 181 RFDGEWDERDIAPFARLMAAHR--------HEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIA-TG- 250 (428)
T ss_pred ccchhhHHHHHHHHHHHHHhCC--------CcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cC-
Confidence 2356678888886432 56889999997 666665543 899999999999999999998 34
Q ss_pred ccCCCCcc-ccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhC-----CcceecCCCcHHHHHHHHHH
Q psy15447 261 LGSTGHGV-TEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSG-----SGYCFSASLPPFLAVAANKA 331 (457)
Q Consensus 261 ~g~~g~~~-~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~aaa~a~ 331 (457)
+|++|.++ .+++|+.| ||+ +++|++|+ +.|++++++++++.+.... ++.+| +.+|++|++++++
T Consensus 251 ~GrtG~~fa~~~~gv~P---Di~--t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~--~g~p~~~aaa~a~ 323 (428)
T PRK07986 251 FGRTGKLFACEHAGIAP---DIL--CLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTF--MGNPLACAVANAS 323 (428)
T ss_pred CccCCCeeeecccCCCC---CEE--EechhhhCCcccCcchhchHHHHHHhhcCCCCccccCCCC--CcCHHHHHHHHHH
Confidence 47777764 58899988 777 79999951 3455688899999886532 23334 4699999999999
Q ss_pred HHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccc
Q psy15447 332 LHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPS 411 (457)
Q Consensus 332 l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~ 411 (457)
|+++++. ++.++++++.++|++.|+++...+.+.-+ +..+.++.+.+..+. ....+.+.|+++|+++.+.
T Consensus 324 L~~i~~~-~~~~~~~~~g~~l~~~l~~l~~~~~i~~v-Rg~Gl~~~ve~~~~~-------~~~~~~~~l~~~Gl~~~~~- 393 (428)
T PRK07986 324 LSLLESG-DWQQQVAAIEAQLREELAPLRDAPMVADV-RVLGAIGVVETTRPV-------NMAALQRFFVEQGVWIRPF- 393 (428)
T ss_pred HHHHHhC-CHHHHHHHHHHHHHHHHHHHhcCCCEEeE-eccceEEEEEeCCcc-------cHHHHHHHHHHCCcEEEec-
Confidence 9999866 47999999999999999885333333222 356788888887653 3557899999999998653
Q ss_pred cCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 412 HLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 412 ~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
.+.+|++|++.+|++|+++++++|+++++.
T Consensus 394 ---------g~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 394 ---------GKLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred ---------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 268999999999999999999999998753
No 40
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=6e-41 Score=332.66 Aligned_cols=350 Identities=14% Similarity=0.136 Sum_probs=267.1
Q ss_pred eeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC-
Q psy15447 65 YVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG- 139 (457)
Q Consensus 65 ~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g- 139 (457)
.++++++|+|+| .||++||||.++ ..+|++ ||+|.+|+.+|++++.+... ...+++...+|+++|++.++
T Consensus 28 ~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~~~----~~~~~~~~~~lae~L~~~~p~ 102 (429)
T PRK06173 28 YPVERADGVMITLKDGRRLIDGMSSWWAALHGYN-HPRLNAAATNQLAKMSHIMF----GGFTHEPAVELAQKLLEILPP 102 (429)
T ss_pred ceEEeceeeEEEcCCCCEEEEccchHHhccCCCC-CHHHHHHHHHHHHhcCCccc----cccCCHHHHHHHHHHHhhCCC
Confidence 468999999999 599999999774 345664 89999999999998653221 11257888999999999875
Q ss_pred -CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe-------------EEEecCC--
Q psy15447 140 -LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK-------------VQYFKHN-- 194 (457)
Q Consensus 140 -~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~-------------~~~~~~~-- 194 (457)
.++++|++||++|++.|++... ++.++|.....+|+.++.++.+++.. +..++.+
T Consensus 103 ~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~ 182 (429)
T PRK06173 103 SLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSI 182 (429)
T ss_pred CcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCc
Confidence 5688999999999999998643 24457788889999887776654411 1122211
Q ss_pred ---------CHHHHHHHHHhhchhcccCCCCccEEEEEecC-CCCCCCCCC----hHHHHHHHHHcCcEEEEEcCccccc
Q psy15447 195 ---------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV-YMNSADICP----LKDILSLRSKYQARIFVDESVSFGT 260 (457)
Q Consensus 195 ---------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v-~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~ 260 (457)
+++.+++.++... +++++|++||+ ++.+|.+.| +++|+++|++||++||+||+| .|
T Consensus 183 ~~~~~~~~~~l~~l~~~i~~~~--------~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~-tG- 252 (429)
T PRK06173 183 KFGEEWNDEAIEPLQDLLEQKG--------DEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA-TG- 252 (429)
T ss_pred ccchhHHHHHHHHHHHHHHhCC--------CcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh-cC-
Confidence 3455666665322 57899999997 888888755 899999999999999999999 45
Q ss_pred ccCCCCcc-ccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhC-Cccee--cCCCcHHHHHHHHHHHH
Q psy15447 261 LGSTGHGV-TEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSG-SGYCF--SASLPPFLAVAANKALH 333 (457)
Q Consensus 261 ~g~~g~~~-~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~aaa~a~l~ 333 (457)
+|++|+++ .+++|+.| ||+ +++|++|+ +.+.+++++++++.+.... ..+.+ +.+.+|+.|++++++|+
T Consensus 253 ~GrtG~~~a~~~~gv~P---Div--~~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~ 327 (429)
T PRK06173 253 FGRTGKLFALEHAGVVP---DIM--CIGKALTGGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIR 327 (429)
T ss_pred CCcCCcchHHHhcCCCC---CEE--EeehhhhCCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHH
Confidence 58888875 68899987 777 69999952 3466788888888875321 11222 33469999999999999
Q ss_pred HHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccC
Q psy15447 334 LLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHL 413 (457)
Q Consensus 334 ~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~ 413 (457)
++++.+ ++++++++.++|++.|+++...+.+.- .+..++++.+.+.++. ....+.+.|+++||++.+.+
T Consensus 328 ~i~~~~-~~~~~~~~g~~l~~~L~~~~~~~~v~~-vRg~Gl~~~iel~~~~-------~~~~i~~~l~e~Gi~v~~~g-- 396 (429)
T PRK06173 328 LLLESP-WQQNIQRIEAQLKQELAPAAEFDSVAE-VRVLGAIGVVEMKEPV-------NMATLQPRFVEHGIWVRPFG-- 396 (429)
T ss_pred HHHhCC-HHHHHHHHHHHHHHHHHHhhcCCCeee-eeccceEEEEEeCCcc-------cHHHHHHHHHHCCeEEEecC--
Confidence 998764 689999999999999986321222211 1356889999887653 45678999999999986532
Q ss_pred ccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 414 DQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 414 ~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
+.+||.||+.+|++|+++++++|+++++.+.+
T Consensus 397 --------~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~~ 428 (429)
T PRK06173 397 --------KLVYIMPPFIISPDELSQLTSGLLRVLKQEYN 428 (429)
T ss_pred --------CEEEEeCCccCCHHHHHHHHHHHHHHHHHHhc
Confidence 68999999999999999999999999987643
No 41
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=9.5e-41 Score=332.80 Aligned_cols=356 Identities=18% Similarity=0.193 Sum_probs=263.7
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|.++++++|+|+| .||++||||.++ ..+|++ ||+|.+|+.+|++++.+.+. +...++...+|+++|++++
T Consensus 28 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~ql~~l~~~~~----~~~~~~~~~~la~~l~~~~ 102 (442)
T PRK13360 28 APRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHG-RPEIVEAVRAQAGELDYAPA----FQMGHPKAFELANRIAEIA 102 (442)
T ss_pred CCceEEeeeeeEEEeCCCCEEEECchhHHHhccCCC-CHHHHHHHHHHHHhCCCccc----CCcCCHHHHHHHHHHHHhC
Confidence 47889999999999 599999999765 345664 89999999999998654322 1225788899999999987
Q ss_pred C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCC-
Q psy15447 139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHN- 194 (457)
Q Consensus 139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~- 194 (457)
+ .++++|++||++|++.|++... ++..+|.....+|+.+..++.+++.. +..++..
T Consensus 103 p~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~ 182 (442)
T PRK13360 103 PGGLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTL 182 (442)
T ss_pred CCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCc
Confidence 4 5688999999999999998643 23457778888999988777665421 1222222
Q ss_pred C-----------------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447 195 N-----------------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVD 253 (457)
Q Consensus 195 d-----------------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~D 253 (457)
+ .+++++.++... ++++++|++||+++++|.+.| +++|+++|++||++||+|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~le~~l~~~~-------~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~D 255 (442)
T PRK13360 183 DLARNAFSKGQPEHGAELADELERLVTLHD-------ASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFD 255 (442)
T ss_pred hhhccccCCChHHHHHHHHHHHHHHHHhcC-------CCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 1 346677775422 257889999999999999988 999999999999999999
Q ss_pred cCc-ccccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCC-----cceecCCCcHHH
Q psy15447 254 ESV-SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGS-----GYCFSASLPPFL 324 (457)
Q Consensus 254 Ea~-~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 324 (457)
|++ ++|++|. .+..+++|+.| ||+ +++|++|+ +.|.+++++++++.+..... .+.++.+.+|+.
T Consensus 256 Ev~tG~GrtG~--~~a~~~~gv~P---Div--t~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~ 328 (442)
T PRK13360 256 EVITGFGRLGA--PFAAQYFGVTP---DLL--TCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLA 328 (442)
T ss_pred chhhCCCCCcc--chhhhhcCCCC---cee--eeeeccccCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHH
Confidence 998 5655543 23457899987 676 89999963 35668889988887753210 122333469999
Q ss_pred HHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcC
Q psy15447 325 AVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAG 404 (457)
Q Consensus 325 ~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~G 404 (457)
|++++++|+++++.+ +.++++++.+++++.|+++...+.+.-+ ...+.+..+.+....... ...+.++.+.|+++|
T Consensus 329 ~aaa~a~L~~l~~~~-l~~~~~~~g~~l~~~l~~l~~~~~v~~v-rG~Gl~~~~~l~~~~~~~--~~~~~~~~~~l~~~G 404 (442)
T PRK13360 329 CAAALATLDLYEREG-LLTRAARLAPYWEDALHSLRDAPHVIDI-RNLGLVGAVELAPRDGKP--GKRAYEVFLKCFEKG 404 (442)
T ss_pred HHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHhhcCCCeeee-eccceEEEEEEecCCCCc--chhHHHHHHHHHHCC
Confidence 999999999998764 8899999999999999874322222111 234555555554221000 014567888999999
Q ss_pred eeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 405 FAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 405 i~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
|++.+. .+.+||+|++.+|++|||+++++|+++++++
T Consensus 405 vl~~~~----------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 405 LMIRYT----------GDILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred cEEEec----------CCEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 998653 2689999999999999999999999998764
No 42
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.1e-40 Score=333.10 Aligned_cols=354 Identities=14% Similarity=0.151 Sum_probs=268.2
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+|+| .|||+||||.++ ..+|++ ||+|.+|+.+|++++.+.... ...++...+|+++|++..
T Consensus 36 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~ql~~~~~~~~~----~~~~~~~~~lAe~L~~~~ 110 (453)
T PRK06943 36 PLLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHA-NPRINAALKDQLDTLEHAMLA----GCTHEPAIELAERLAALT 110 (453)
T ss_pred CCceEEecccCEEEeCCCCEEEEcchHHHHhcCCCC-CHHHHHHHHHHHHhcCCcccc----ccCCHHHHHHHHHHHHhC
Confidence 47889999999999 599999999875 345654 899999999999986543221 125788899999999988
Q ss_pred CC--CcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCC-
Q psy15447 139 GL--EETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHN- 194 (457)
Q Consensus 139 g~--~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~- 194 (457)
+. ++++|++||++|++.|++... ++.++|.....||+.+..++.+++.. +..++.+
T Consensus 111 p~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~ 190 (453)
T PRK06943 111 GGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPD 190 (453)
T ss_pred CCCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCC
Confidence 63 578999999999999998752 34557888899999988777766522 1122211
Q ss_pred ----------------CHHHHHHHHHhhchhcccCCCCccEEEEEec-CCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447 195 ----------------NMQHLEELLRQQDERDTLNSKVTKKFIIVEG-VYMNSADICP----LKDILSLRSKYQARIFVD 253 (457)
Q Consensus 195 ----------------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~-v~~~~G~i~~----l~~i~~l~~~~g~~li~D 253 (457)
+++++++.+++. ++++++|++|| +++.+|.+.| +++|+++|++||++||+|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~--------~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~D 262 (453)
T PRK06943 191 ARGARPGETAADVAARALADVRRLFAER--------AGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIAD 262 (453)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHhC--------CCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEee
Confidence 245666676542 25789999999 4988888765 899999999999999999
Q ss_pred cCc-ccccccCCCCc-cccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhC----CcceecCCCcHHH
Q psy15447 254 ESV-SFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSG----SGYCFSASLPPFL 324 (457)
Q Consensus 254 Ea~-~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 324 (457)
|++ ++|+ +|.+ ..+++|+.| ||+ +++|++|+ +.|++++++++++.+.... ..+..+.+.+|+.
T Consensus 263 EV~TG~GR---tG~~fa~~~~gv~P---Div--t~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~ 334 (453)
T PRK06943 263 EIAVGCGR---TGTFFACEQAGVWP---DFL--CLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLA 334 (453)
T ss_pred chhhCCCC---CcchhHHHhCCCCC---CeE--eeehhhccCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHH
Confidence 997 4555 4544 458899988 787 79999962 4577889999988775311 0122233459999
Q ss_pred HHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcC
Q psy15447 325 AVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAG 404 (457)
Q Consensus 325 ~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~G 404 (457)
|++++++|+++++++ +.++.++++++|++.|+++...+.+.-+ +..+.++.+.+..+.+. ......++.+.++++|
T Consensus 335 ~aaa~a~L~~i~~~~-l~~~~~~~G~~l~~~L~~l~~~~~v~~v-rG~Gl~~gvel~~~~~~--~~~~~~~i~~~~~~~G 410 (453)
T PRK06943 335 CRAALATLDLFAEDD-VLARNARKSARLRAALAPLAAHPQVRHL-RQRGTIFAFDVALDGDA--ARTFSRRFFEAALERE 410 (453)
T ss_pred HHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHhcCCCEEeE-eccccEEEEEEccCCCc--chHHHHHHHHHHHHCC
Confidence 999999999998754 8899999999999999885434444322 45688888888632211 1113567889999999
Q ss_pred eeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 405 FAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 405 i~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+++.+.. +.+||+|++.+|++|||+++++++++++++
T Consensus 411 ll~~~~g----------~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 411 LLLRPIG----------TTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred cEEEecC----------CEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 9986532 579999999999999999999999999876
No 43
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=4.1e-41 Score=336.66 Aligned_cols=359 Identities=14% Similarity=0.166 Sum_probs=269.5
Q ss_pred ceeeecCCCcEEEE-CCeeeEEeecCCccCCC-CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC--
Q psy15447 64 KYVVDQKSGYIVNI-NGIPCINFATHNYLSFV-ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG-- 139 (457)
Q Consensus 64 ~~~i~~~~g~~~~~-~G~~~id~~s~~~l~~~-~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-- 139 (457)
|+++++++|+|+|+ |||+||||+++++.+++ +||+|.+|+.+|++++.+.+ ++ ..++...+|+++|+++++
T Consensus 55 ~~~i~~a~G~~l~D~dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~--~~---~~~~~~~~lae~L~~~~p~~ 129 (459)
T PRK06082 55 LDVLASAEGIYIEDVDGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFSP--RR---FTNETAIECAEKLTEIAGGE 129 (459)
T ss_pred CceEEeeeeeEEEECCCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCcc--Cc---cCCHHHHHHHHHHHHhCCCC
Confidence 78899999999995 99999999876554444 69999999999999875432 11 247889999999999986
Q ss_pred CCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCCeE------------EEec--------CCC-
Q psy15447 140 LEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRCKV------------QYFK--------HNN- 195 (457)
Q Consensus 140 ~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~~~------------~~~~--------~~d- 195 (457)
.++++|.+||++|++.|++.. .++.++|.....+|+.+..++.+++... ..++ .++
T Consensus 130 ~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (459)
T PRK06082 130 LNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDA 209 (459)
T ss_pred CCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCCh
Confidence 357888999999999999864 4567788889999999988887765321 1111 222
Q ss_pred -------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCC
Q psy15447 196 -------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTG 265 (457)
Q Consensus 196 -------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g 265 (457)
++++++.+++. +.+++|++||+++.++.+.| +++|+++|++||++||+||+++. +|++|
T Consensus 210 ~~~~~~~~~~l~~~i~~~---------~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG--~GRtG 278 (459)
T PRK06082 210 DGSDVHYADYLEYVIEKE---------GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNG--MGRTG 278 (459)
T ss_pred hHHHHHHHHHHHHHHhcC---------CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhC--CCccc
Confidence 23456655431 36789999999987555556 89999999999999999999862 56667
Q ss_pred Ccc-ccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHH
Q psy15447 266 HGV-TEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSL 341 (457)
Q Consensus 266 ~~~-~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~ 341 (457)
.++ .+++|+.| ||+ +++|++|+ +.|.+++++++.+... ....+ ++.+.+|++|++++++|++++++ ++
T Consensus 279 ~~fa~e~~gv~P---Div--~~gKgl~gG~~P~~av~~~~~i~~~~~-~~~~~-~T~~gnpl~~aaa~a~L~~l~~~-~l 350 (459)
T PRK06082 279 EWFTHQAYGIEP---DIL--CIGKGLGGGLVPIAAMITKDKYNTAAQ-ISLGH-YTHEKSPLGCAAALATIEVIEQE-GL 350 (459)
T ss_pred hhhHhHhhCCCC---CEE--EecccccCCCCcceEEEEcHHHHhhcc-CCCCC-CCCCcCHHHHHHHHHHHHHHHhc-CH
Confidence 664 48899988 787 69999963 3467788887765432 11122 45567999999999999999765 48
Q ss_pred HHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCccccCCC
Q psy15447 342 LTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQ 420 (457)
Q Consensus 342 ~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~ 420 (457)
.+++++++++|++.|+++....++....+..+.++.+.+..+... .........+...++++|+++.+..
T Consensus 351 ~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~--------- 421 (459)
T PRK06082 351 LEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVSQ--------- 421 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEecC---------
Confidence 999999999999999875321222222245688888888643211 1111235678889999999986532
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCCC
Q psy15447 421 KPSIRITCNISHTEQDMNSLIETLCKSHDIAVQPL 455 (457)
Q Consensus 421 ~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~~ 455 (457)
.+.+|++|++++|++||+++++++++++.++.+.-
T Consensus 422 ~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~~~~~ 456 (459)
T PRK06082 422 GNVIQLSPPLIITREELTQALAILEEAIAKICQDF 456 (459)
T ss_pred CCEEEEeCCCccCHHHHHHHHHHHHHHHHHHhhhc
Confidence 47899999999999999999999999998875543
No 44
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=333.46 Aligned_cols=362 Identities=15% Similarity=0.108 Sum_probs=268.0
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+|+| .|||+||||.++ ..+|++ ||+|.+|+.+|+++..+.. ..+...++...+|+++|++.+
T Consensus 28 ~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~i~~Ai~~q~~~~~~~~---~~~~~~~~~~~~lae~L~~~~ 103 (459)
T PRK05965 28 GVTVLASAKGATLTDASGHQLLDAFAGLWCVNVGYG-QESIVEAAAEQMRELPYAT---GYFHFGSEPAIRLAAKLAERA 103 (459)
T ss_pred CCceEEeeeEeEEEECCCCEEEECcccHHhccCCCC-CHHHHHHHHHHHHhcCCcc---cccccCCHHHHHHHHHHHhhC
Confidence 47899999999999 599999999764 345554 8999999999999854322 111225788889999999987
Q ss_pred C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEe--cC
Q psy15447 139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYF--KH 193 (457)
Q Consensus 139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~--~~ 193 (457)
+ .++++|++||++|++.|++... ++.++|.....||+.+..++.+++.. +..+ +.
T Consensus 104 p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~ 183 (459)
T PRK05965 104 PGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPY 183 (459)
T ss_pred CCCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCc
Confidence 4 4678888999999999998643 13457778899999987766655421 1111 11
Q ss_pred -------CCH--------HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q psy15447 194 -------NNM--------QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDE 254 (457)
Q Consensus 194 -------~d~--------~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DE 254 (457)
+|. +++++.+++.. ++++++||+||+++.+|.+.| +++|+++|++||++||+||
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-------~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DE 256 (459)
T PRK05965 184 PYRNPVGDDPQAIIAASVAALRAKVAELG-------ADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADE 256 (459)
T ss_pred ccccccCCChHHHHHHHHHHHHHHHHhcC-------CCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 232 45666665432 257899999999999898765 8999999999999999999
Q ss_pred Ccc-cccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhC-----CcceecCCCcHHHH
Q psy15447 255 SVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSG-----SGYCFSASLPPFLA 325 (457)
Q Consensus 255 a~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 325 (457)
+++ +|++|. .+..+++|+.| ||+ +++|++|+ +-|++++++++++.+.... ..+.++.+.+|++|
T Consensus 257 V~tGfGRtG~--~~a~~~~gv~P---Div--~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~ 329 (459)
T PRK05965 257 VITGFGRTGP--LFACEAEGVVP---DLM--TVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSA 329 (459)
T ss_pred hhccCccCch--hhhHhhcCCCC---CeE--EechhhccCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHH
Confidence 974 655553 23568899988 787 79999952 4577889999988775321 11223444699999
Q ss_pred HHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHHHH
Q psy15447 326 VAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDMCI 401 (457)
Q Consensus 326 aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l~ 401 (457)
|+++++|++++++ ++.++.++++++|++.|+++...+.+. ..+..+.++.+.+..+... .........+.+.|+
T Consensus 330 Aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~l~~l~~~~~v~-~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~ 407 (459)
T PRK05965 330 AVGLEVLRLYHEG-GLLANGQKAGPRFAAGLDALRAHPLVG-DVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAY 407 (459)
T ss_pred HHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHhhccCCCEE-EEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHH
Confidence 9999999999765 488999999999999998854322221 1245678888877542210 111124567889999
Q ss_pred HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 402 QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 402 ~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
++|+++.+.+ .+.+|++|++.+|++|+++++++++++++++..
T Consensus 408 ~~Gll~~~~g---------~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~~~ 450 (459)
T PRK05965 408 ANGLVFRAFG---------DGVLGFAPALCCTEGEFDLIFERTRKTLDDVLA 450 (459)
T ss_pred hCCeEEEecC---------CcEEEEECCCcCCHHHHHHHHHHHHHHHHHHhc
Confidence 9999987532 478999999999999999999999999987743
No 45
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=332.31 Aligned_cols=362 Identities=14% Similarity=0.131 Sum_probs=269.3
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+|+| .|||+||||.++ ..+|++ ||+|.+|+.+|+++..+... +...++...+++++|+++.
T Consensus 34 ~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Av~~q~~~~~~~~~----~~~~~~~~~~la~~l~~~~ 108 (460)
T PRK06541 34 PVPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHG-RAELAEAAAKQAGTLAFFPL----WSYAHPPAIELAERLAALA 108 (460)
T ss_pred CCceEEeCcccEEEeCCCCEEEECCccHHhccCCCC-CHHHHHHHHHHHhhCcCccc----cccCCHHHHHHHHHHHHhC
Confidence 37889999999999 599999999775 446665 89999999999998654321 1125788899999999987
Q ss_pred C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecC--
Q psy15447 139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFKH-- 193 (457)
Q Consensus 139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~-- 193 (457)
+ .++++|++||++|++.|++... ++.++|.....+|+.+..++.+++.. +..++.
T Consensus 109 p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~ 188 (460)
T PRK06541 109 PGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTN 188 (460)
T ss_pred CCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCc
Confidence 5 4688999999999999998543 24567888999999988877765421 111221
Q ss_pred --------CCH--------HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447 194 --------NNM--------QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVD 253 (457)
Q Consensus 194 --------~d~--------~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~D 253 (457)
+++ +.+++.++... ++.+++|++||+++++|.+.| +++|+++|++||++||+|
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-------~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~D 261 (460)
T PRK06541 189 FYRAPELGDDPEAFGRWAADRIEEAIEFEG-------PDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSD 261 (460)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHHhcC-------CCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 222 45566664321 257899999999999999988 999999999999999999
Q ss_pred cCc-ccccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCc--ceecCCCcHHHHHH
Q psy15447 254 ESV-SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSG--YCFSASLPPFLAVA 327 (457)
Q Consensus 254 Ea~-~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aa 327 (457)
|++ ++|++|. .+..+++|+.| ||+ +++|++|. +.|++++++++++.+...... +.++.+.+|++|++
T Consensus 262 EV~tGfGR~G~--~~a~~~~gv~P---Div--t~gK~l~~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aa 334 (460)
T PRK06541 262 EVICAFGRLGE--MFGCERFGYVP---DII--TCAKGITSGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAV 334 (460)
T ss_pred chhhCCCcCch--hhhhhhcCCCC---CEE--EecccccCCccceeEEEEcHHHHHHhhcCCCccccCCCCCCCHHHHHH
Confidence 998 6766654 22457789887 676 79999973 457788888888877533212 22355579999999
Q ss_pred HHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch------H-HHHHHHHHHHHHH
Q psy15447 328 ANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE------V-ASKKLLQTICDMC 400 (457)
Q Consensus 328 a~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~-~~~~~~~~~~~~l 400 (457)
++++++.+++. ++.+++++++++|++.|+++... .+.......+.++.+.+..+... . ........+.+.|
T Consensus 335 ala~l~~l~~~-~~~~~~~~~g~~l~~~L~~l~~~-~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l 412 (460)
T PRK06541 335 ALANLDIFERE-GLLDHVRDNEPAFRATLEKLLDL-PIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPAL 412 (460)
T ss_pred HHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHH
Confidence 99999998765 47899999999999999885322 22111245688888887543210 0 0111223678899
Q ss_pred HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 401 IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 401 ~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+++||++.+.. .+.+.+||+|++.+|++|||+++++++++++++.
T Consensus 413 ~~~Gi~~~~~~-------~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 413 FEAGLYCRADD-------RGDPVVQLAPPLISGQEEFDEIEQILRSVLTEAW 457 (460)
T ss_pred HhCCeEEEecC-------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999987632 1247899999999999999999999999998754
No 46
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=8.1e-41 Score=334.49 Aligned_cols=364 Identities=13% Similarity=0.133 Sum_probs=266.4
Q ss_pred ceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447 64 KYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG 139 (457)
Q Consensus 64 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g 139 (457)
|+++++++|+|+| .|||+||||.++ ..+|++ ||+|.+|+.+|+++..+.+. ...++...+|+++|+++++
T Consensus 30 p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~~~-----~~~~~~~~~lae~l~~~~~ 103 (451)
T PRK07678 30 TMVVAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYG-RKELAEAAYEQLKTLSYFPL-----TQSHEPAIKLAEKLNEWLG 103 (451)
T ss_pred CeeEEeeeeeEEEeCCCCEEEEccccHHhhcCCCC-CHHHHHHHHHHHHhcCcccc-----ccCCHHHHHHHHHHHHhCC
Confidence 7889999999999 599999999775 345654 89999999999998643321 1246778999999999886
Q ss_pred C-CcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCC---
Q psy15447 140 L-EETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHN--- 194 (457)
Q Consensus 140 ~-~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~--- 194 (457)
. +.++|++||++|++.|++... ++..+|.....||+.+..++.+++.. +..++.+
T Consensus 104 ~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (451)
T PRK07678 104 GEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCY 183 (451)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccc
Confidence 4 467888999999999998642 23457778889999988877765421 1122211
Q ss_pred -----------CH---HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCc
Q psy15447 195 -----------NM---QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESV 256 (457)
Q Consensus 195 -----------d~---~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~ 256 (457)
|. +.+++.++... ++++++||+||+++.+|.+.| +++++++|++||++||+||++
T Consensus 184 ~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~ 256 (451)
T PRK07678 184 RMPGIESEDIYDLECVKEIDRVMTWEL-------SETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVI 256 (451)
T ss_pred cccccCChHHHHHHHHHHHHHHHHhcC-------CCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehh
Confidence 11 22455554221 257899999999999898876 899999999999999999997
Q ss_pred -ccccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhC----CcceecCCCcHHHHHHH
Q psy15447 257 -SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSG----SGYCFSASLPPFLAVAA 328 (457)
Q Consensus 257 -~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~aaa 328 (457)
++|++|. .+..+++|+.| ||+ +++|++|+ +-|++++++++++.+.... ..+..+.+.||++||++
T Consensus 257 tGfGRtG~--~~~~~~~gv~P---Div--t~gK~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa 329 (451)
T PRK07678 257 CGFGRTGK--AFGFMNYGVKP---DII--TMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALA 329 (451)
T ss_pred hcCCcCch--hHHHHhcCCCC---CEE--EeecccccCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHH
Confidence 5666543 33457799988 787 89999963 3477889999998875321 11233445699999999
Q ss_pred HHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch--HHHHHHHHHHHHHHHHcCee
Q psy15447 329 NKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE--VASKKLLQTICDMCIQAGFA 406 (457)
Q Consensus 329 ~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~Gi~ 406 (457)
+++|++++++ .+.+++++++++|++.|+++....++.......+.++.+.+..+... +.+.....++++.|+++||+
T Consensus 330 ~a~l~~l~~~-~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~ 408 (451)
T PRK07678 330 LKNLEIMENE-NLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACKEKGLI 408 (451)
T ss_pred HHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcE
Confidence 9999999765 48899999999999999653211222222245688888887533211 11122467899999999999
Q ss_pred EeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 407 ITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 407 v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+.+.. |.+ +...+.+||+|++.+|++|||+++++++++++.+
T Consensus 409 ~~~~g-~~v--~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 409 IGKNG-DTV--AGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred EeecC-ccc--cCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 86532 111 1224789999999999999999999999998765
No 47
>PLN02624 ornithine-delta-aminotransferase
Probab=100.00 E-value=1.5e-40 Score=334.69 Aligned_cols=351 Identities=16% Similarity=0.158 Sum_probs=269.4
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|.++++++|.|+| .||++||||.++ ..+|+ +||+|.+|+.+|+.++.+.+. . ..++...+|+++|++++
T Consensus 57 ~p~~~~~a~G~~l~d~dG~~ylD~~sg~~~~~~Gh-~~p~v~~ai~~ql~~~~~~~~--~---~~~~~~~~la~~L~~~~ 130 (474)
T PLN02624 57 IPVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGH-CHPKIIKALTEQAEKLTLSSR--A---FYNDKFPEFAEYLTSMF 130 (474)
T ss_pred CCceEEeeeeCEEEECCCCEEEEcccchhcccCCC-CCHHHHHHHHHHHHhcCCccc--c---cCCHHHHHHHHHHHhhc
Confidence 47889999999999 599999999875 22344 489999999999999765432 1 24788899999999999
Q ss_pred CCCcEEEecccHHHHHHHHHhhcC-----C----C--CEEEEeCcccHHHHHHHHhcCC------------eEEEecCCC
Q psy15447 139 GLEETALYSFGFSTSASAIAAYVK-----R----N--DAVFVDENINFAIQTGLIASRC------------KVQYFKHNN 195 (457)
Q Consensus 139 g~~~~i~~~sG~~a~~~ai~a~~~-----~----g--d~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~d 195 (457)
|.+.+++++||++|++.|++.... + + .+|.....+|+.+...+.+++. .+..++++|
T Consensus 131 ~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d 210 (474)
T PLN02624 131 GYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGD 210 (474)
T ss_pred CCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCCC
Confidence 999999999999999999985432 1 2 3566677889988877766542 234678889
Q ss_pred HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCccc-c
Q psy15447 196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVT-E 270 (457)
Q Consensus 196 ~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~-~ 270 (457)
++.+++.++... +.+++|++||+++++|.+.| |++|+++|++||++||+||+|+ | +|++|.++. +
T Consensus 211 ~~~l~~~l~~~~--------~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G-~GrtG~~~a~~ 280 (474)
T PLN02624 211 LDALEKIFEEDG--------DRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT-G-LARTGKMLACD 280 (474)
T ss_pred HHHHHHHHHhCC--------CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-C-cCcCcchhhHH
Confidence 999999997432 56889999999999999988 9999999999999999999996 3 567776544 5
Q ss_pred ccCCCCCCccEEEecCcccccCc---ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHH
Q psy15447 271 YFGVSTEEVDMIIGSLEHALGSV---GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLRE 347 (457)
Q Consensus 271 ~~~~~~~~~Di~~~s~sK~lg~~---gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~ 347 (457)
++++.| |++ +++|++|++ .|++++++++++.+....+..+| +.+|+.++++.++|+.+++. ++.+++.+
T Consensus 281 ~~~i~p---Div--~lsK~lggG~~pigav~~~~~i~~~~~~~~~~~T~--~g~pl~~aaa~aaLe~l~~~-~l~~~~~~ 352 (474)
T PLN02624 281 WEEVRP---DVV--ILGKALGGGVIPVSAVLADKDVMLCIKPGEHGSTF--GGNPLASAVAMAALQVVQDE-KLAERSAK 352 (474)
T ss_pred hcCCCC---CEE--EecccccCCCCcceeeeecHHHHhHhccCCcCCCC--CCCHHHHHHHHHHHHHHHhc-hHHHHHHH
Confidence 577766 676 689999743 47788888888776543333333 45999999999999988754 47788889
Q ss_pred HHHHHHHHhhcccc-cCC-eEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEE
Q psy15447 348 KCNTMHSLLSQHKV-TQR-FLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIR 425 (457)
Q Consensus 348 ~~~~l~~~L~~~~~-~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lR 425 (457)
+.+++++.|+++.. .+. +... .+.+.++.+.+..+... .....++++.|.++||++.+.. .+++|
T Consensus 353 ~~~~l~~~L~~l~~~~~~~i~~v-rg~G~~~~i~l~~~~~~---~~~a~~~~~~L~e~GV~v~p~~---------~~~lR 419 (474)
T PLN02624 353 LGQELRDQLQKIQKQFPKLIKEV-RGRGLLNAVVLNSPKLG---PVSAYDVCLKLKERGLLAKPTH---------DTIIR 419 (474)
T ss_pred HHHHHHHHHHHHHHhCCCceEEE-EeeEEEEEEEecCCCcC---hHHHHHHHHHHHhCCeEEecCC---------CCEEE
Confidence 99999998877421 121 2212 34567777777543100 0145678999999999987643 47899
Q ss_pred EEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 426 ITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 426 i~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
|+|++.+|++||++++++|+++++.
T Consensus 420 ~~p~l~~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 420 LAPPLSISEDELQECSKALSDVLEH 444 (474)
T ss_pred EECCccCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988754
No 48
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=332.69 Aligned_cols=383 Identities=13% Similarity=0.107 Sum_probs=272.7
Q ss_pred CCCCCCccccc-cc-cCCceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcc
Q psy15447 48 PEPIVSKAEKF-KD-VSSKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFY 121 (457)
Q Consensus 48 ~~~~~~~~~~~-~~-~~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~ 121 (457)
...+|+|.++. +. ...|+++++++|+||| .|||+||||.++ ..+|++ ||+|.+|+.+|+.+..+... ...
T Consensus 7 ~~~~w~p~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~ql~~~~~~~~---~~~ 82 (449)
T PRK07481 7 ARRFWHPMAHPAEMKARPPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHN-REEVKEAIVRQLDELEYYST---FDG 82 (449)
T ss_pred cccccCCcccccccccCCCceEEeccccEEEeCCCCEEEECchhHHhhcCCCC-CHHHHHHHHHHHHhccceec---ccc
Confidence 34455555544 32 2357899999999999 599999999764 345664 89999999999998554221 112
Q ss_pred cChHHHHHHHHHHHhhcC---CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe--
Q psy15447 122 GTNVVHLDLENDIASFMG---LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK-- 187 (457)
Q Consensus 122 g~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~-- 187 (457)
..++...+++++|+++++ .++++|++||++|++.|++... ++..+|.....||+.+..++.+++..
T Consensus 83 ~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~ 162 (449)
T PRK07481 83 TTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVF 162 (449)
T ss_pred cCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCccc
Confidence 257889999999999874 4678899999999999998643 34457788889999888776655321
Q ss_pred ----------EEEe--------cCC--CHHHHHHHHHhh-chhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHH
Q psy15447 188 ----------VQYF--------KHN--NMQHLEELLRQQ-DERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSL 242 (457)
Q Consensus 188 ----------~~~~--------~~~--d~~~le~~l~~~-~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l 242 (457)
+..+ +.+ |++++++.+.+. ........++++++|++||+++.+|.+.| +++|+++
T Consensus 163 ~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~l 242 (449)
T PRK07481 163 RRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREV 242 (449)
T ss_pred ccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHH
Confidence 1111 123 555544332211 00000011257899999999999998766 8999999
Q ss_pred HHHcCcEEEEEcCcccccccCCCCc-cccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhC-----Cc
Q psy15447 243 RSKYQARIFVDESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSG-----SG 313 (457)
Q Consensus 243 ~~~~g~~li~DEa~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~-----~~ 313 (457)
|++||++||+||+++. +|++|.+ ..+++|+.| ||+ +++|++|+ +.|++++++++++.+.... ..
T Consensus 243 c~~~g~llI~DEV~tG--fGRtG~~~a~~~~gv~P---Div--~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~ 315 (449)
T PRK07481 243 CDRHGILLIADEVVTG--FGRTGSWFGSRGWGVKP---DIM--CLAKGITSGYVPLGATMVNARIADAFEANADFGGAIM 315 (449)
T ss_pred HHHcCCEEEEeehhhC--cCcCchhhHhhhcCCCC---CEE--EEeecccCCCcCceEEEEcHHHHHHHhccCccccccc
Confidence 9999999999999752 3444544 457899988 777 79999963 4577889999988875321 01
Q ss_pred ceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHH
Q psy15447 314 YCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VAS 389 (457)
Q Consensus 314 ~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~ 389 (457)
+..+.+.+|++|++++++|+++++. .+.+++++++++|++.|+++....++.......+.++.+.+..+... ...
T Consensus 316 h~~T~~gnpl~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~ 394 (449)
T PRK07481 316 HGYTYSGHPVACAAALATLDIVVRE-DLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPS 394 (449)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCch
Confidence 2223345999999999999999765 48899999999999999875421222222245678888887532110 111
Q ss_pred HHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 390 KKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 390 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
......+.+.|+++|+++.+.+ +.+||+|++.+|++|||+++++++++++++.
T Consensus 395 ~~~~~~~~~~~~~~Gvl~~~~g----------~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 447 (449)
T PRK07481 395 KGYANAVADVARENGVLVRPSG----------TKIILSPPLVIQREDVDRIVDALDAGLSAVP 447 (449)
T ss_pred hHHHHHHHHHHHhCCeEEEecC----------CEEEEECCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 2245678889999999987542 4689999999999999999999999998764
No 49
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=3.6e-40 Score=328.98 Aligned_cols=407 Identities=11% Similarity=0.093 Sum_probs=294.8
Q ss_pred CccccccchhhhhhhHHHHHHHHHHhhccccCCCChhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEE-ECC
Q psy15447 1 MIVTEQLDFYTSVGLFLPLTLFIVLSLSLSKHKKHTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVN-ING 79 (457)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~-~~G 79 (457)
|..|.|+|--.+.-. -.-+.-.|.++...++++.+...+..|.+.............|.++++++|+|+| .||
T Consensus 1 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~S~~l~~ra~~~~p~g~~~~~~~~~~~~~p~~~~~a~G~~v~D~DG 74 (453)
T PRK07046 1 MMTTHGIDLARAAAL------LARERARFLEAHPRSRALAARAAQHLLGGVPMHWMNDWPTPFPLFVAEARGARFTDVDG 74 (453)
T ss_pred CCCcccCCHHHHHHH------HHHHHHHHHhcChhhHHHHHHHHhhCCCCcccccccccCCCCCCeEEeeeeCEEEeCCC
Confidence 556777776543221 1223344555555688999999999999873211111122368899999999999 599
Q ss_pred eeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHH
Q psy15447 80 IPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASA 156 (457)
Q Consensus 80 ~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~a 156 (457)
|+||||.++ ..+|+ +||+|.+|+.+|+++. ... ...++...+|+++|++.++.+++.|++||++|++.|
T Consensus 75 ~~yiD~~~g~g~~~lGh-~~p~i~~Av~~q~~~~-~~~------~~~~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~A 146 (453)
T PRK07046 75 HRYDDFCLGDTGAMFGH-SPAPVARALAEQARRG-LTT------MLPSEDAAWVGEELARRFGLPYWQVATTATDANRFV 146 (453)
T ss_pred CEEEEecccccccccCC-CCHHHHHHHHHHHHhC-CCC------CCCCHHHHHHHHHHHHHhCCCEEEEECCHHHHHHHH
Confidence 999999764 23454 4899999999999873 211 125788899999999998888999999999999999
Q ss_pred HHh---hcCCCCEEEEeCcccHHHHHHHHh--c----------C------CeEEEecCCCHHHHHHHHHhhchhcccCCC
Q psy15447 157 IAA---YVKRNDAVFVDENINFAIQTGLIA--S----------R------CKVQYFKHNNMQHLEELLRQQDERDTLNSK 215 (457)
Q Consensus 157 i~a---~~~~gd~v~~~~~~h~~~~~~~~~--~----------g------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~ 215 (457)
++. ++++..+|.....||+.+...+.. . + ..+..+++||++++++.+..
T Consensus 147 lrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~---------- 216 (453)
T PRK07046 147 LRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFNDLAALEAALAD---------- 216 (453)
T ss_pred HHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCCCHHHHHHHhCC----------
Confidence 975 456767788888999974332211 1 1 13456788999999998842
Q ss_pred CccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc
Q psy15447 216 VTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG 291 (457)
Q Consensus 216 ~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg 291 (457)
+++++|++||++++.|.+.| +++++++|++||++||+||++++ ++|.. +..+++|+.| ||+ +++|++|
T Consensus 217 ~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tf-r~g~G--g~~~~~gv~P---Di~--t~gK~lg 288 (453)
T PRK07046 217 GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTI-SSGPG--GYTRAHGLEP---DFL--VVGKPIA 288 (453)
T ss_pred CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccC-ccCCc--chhHHhCCCc---cce--eehhhhc
Confidence 46899999999999998877 89999999999999999999983 35542 3567789988 777 7999996
Q ss_pred C--cccEEEecHHHHHHHHhhC------C-cceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccccc
Q psy15447 292 S--VGGFCVGSSYIIEHHRLSG------S-GYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVT 362 (457)
Q Consensus 292 ~--~gG~v~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~ 362 (457)
+ +.|++++++++++.+.... . .+..+.+.+|+.|++++++|+++++. +..+++++++++|++.|+++...
T Consensus 289 gG~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~-~~~~~~~~~g~~l~~~L~~l~~~ 367 (453)
T PRK07046 289 GGVPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTE-AAYAHMLALAARLAAGLRAVIAR 367 (453)
T ss_pred CCCcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHh
Confidence 3 4578899999998875321 1 12223456999999999999999755 47899999999999999764322
Q ss_pred CCeEEeccCCCCeEEEEecCCcch---H----HHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447 363 QRFLVQGHRDTPLKYLYLQKSDDE---V----ASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQ 435 (457)
Q Consensus 363 ~~~~~~~~~~~~~~~i~~~~~~~~---~----~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e 435 (457)
.++.......+.++.+.+..+... . .+......+...|+++||++.+. .+.++++|+ ||++
T Consensus 368 ~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~----------~~~~~~~p~--~t~~ 435 (453)
T PRK07046 368 HGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITPF----------HNMMLVCPA--TTAA 435 (453)
T ss_pred CCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEecc----------cCcEEEeCC--CCHH
Confidence 333322233456666665332110 0 01224557888899999998753 246788875 8999
Q ss_pred HHHHHHHHHHHHHHHhc
Q psy15447 436 DMNSLIETLCKSHDIAV 452 (457)
Q Consensus 436 di~~~~~~l~~~~~~~~ 452 (457)
|||+++++++++++++.
T Consensus 436 did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 436 DVDRLVAAFDACLGELL 452 (453)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999988653
No 50
>KOG1404|consensus
Probab=100.00 E-value=2.7e-41 Score=309.64 Aligned_cols=360 Identities=16% Similarity=0.126 Sum_probs=274.2
Q ss_pred cCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHh
Q psy15447 61 VSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIAS 136 (457)
Q Consensus 61 ~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~ 136 (457)
...|+.|++++|.||++ +|++|+|+.++ .-+|+ +||+|.+++.+|+.+..+...+. .+++..+++++|++
T Consensus 30 ~~~Pl~Iv~~~~~ylyDe~G~ryLD~f~Gi~tvslGH-chP~v~~a~~kQl~~l~H~t~~~-----~~~pi~~~Ae~L~s 103 (442)
T KOG1404|consen 30 YKKPLVIVRGEGQYLYDEEGRRYLDAFGGIVTVSLGH-CHPDVVAAAVKQLKKLYHTTSGY-----LNPPIHDLAEALVS 103 (442)
T ss_pred ccCCceEEecceEEEEcCCCceeehhhCCeEEEEcCC-CChHHHHHHHHhhhhhEEeeccc-----cCCcHHHHHHHHHH
Confidence 34689999999999995 99999998765 33555 49999999999998866554433 57788999999999
Q ss_pred hcC--CCcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhcCCeEEEec------------CCC----
Q psy15447 137 FMG--LEETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIASRCKVQYFK------------HNN---- 195 (457)
Q Consensus 137 ~~g--~~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~------------~~d---- 195 (457)
.+. .+.++|++||++||+.+++. +++.-|+|.....||+.+...+.+.+......+ .+|
T Consensus 104 ~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~ 183 (442)
T KOG1404|consen 104 KLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRG 183 (442)
T ss_pred hCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccc
Confidence 876 44678889999999999864 467779999999999999888877764433221 111
Q ss_pred -------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcc-cccccC
Q psy15447 196 -------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVS-FGTLGS 263 (457)
Q Consensus 196 -------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~-~g~~g~ 263 (457)
-+.-++..++..+...+..+.++++++.|++++.+|.+.+ |+++.++|+++|.++|.||+++ ||++|
T Consensus 184 ~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG- 262 (442)
T KOG1404|consen 184 IFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG- 262 (442)
T ss_pred cCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc-
Confidence 1122222222222222233467899999999999998865 8999999999999999999984 66665
Q ss_pred CCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHH
Q psy15447 264 TGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSL 341 (457)
Q Consensus 264 ~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~ 341 (457)
+ .+-++.+|+.| ||+ |++|++|. +-|+++.++++++.+..... +.++.+.+|++||+++++|++++++ .+
T Consensus 263 ~-~wgfe~h~v~P---DIv--TmAKgiGnG~Pl~AVvtt~EIa~v~~~~~~-~fnTyggnP~a~avg~aVL~Vikee-~L 334 (442)
T KOG1404|consen 263 H-MWGFESHGVVP---DIV--TMAKGIGNGFPLGAVVTTPEIADVLNQKSS-HFNTYGGNPVACAVGLAVLKVIKEE-NL 334 (442)
T ss_pred c-cccccccCCCc---cHH--HHHhhccCCCcceeeecCHHHHHHHHhccc-cccccCCCchhHHHHHHHHHHHHHH-hH
Confidence 2 34467889988 677 99999963 45888999999998876552 3344456999999999999999876 48
Q ss_pred HHHHHHHHHHHHHHhhcccccCCeEEecc--CCCCeEEEEecCCc-c-hHHHHHHHHHHHHHHHHcCeeEeccccCcccc
Q psy15447 342 LTKLREKCNTMHSLLSQHKVTQRFLVQGH--RDTPLKYLYLQKSD-D-EVASKKLLQTICDMCIQAGFAITCPSHLDQEA 417 (457)
Q Consensus 342 ~~~l~~~~~~l~~~L~~~~~~~~~~~~~~--~~~~~~~i~~~~~~-~-~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~ 417 (457)
+++..+.+.+|.+.|.+++ .+.++.++ ..+.++.+++.++. + ..++......+.+.|.++|+++..++.
T Consensus 335 qE~aa~vG~yl~~~l~~l~--d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i----- 407 (442)
T KOG1404|consen 335 QENAAEVGSYLLEKLAALK--DKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGI----- 407 (442)
T ss_pred HHHHHHHHHHHHHHHHHHh--hcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccc-----
Confidence 8999999999999998854 34445444 45788888887665 2 244444667789999999999966543
Q ss_pred CCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447 418 KKQKPSIRITCNISHTEQDMNSLIETL 444 (457)
Q Consensus 418 ~~~~~~lRi~~~~~~t~edi~~~~~~l 444 (457)
..+.+||.||+++|++|+|.+++..
T Consensus 408 --~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 408 --HGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred --cceEEEecCCeeccHHHHHHHHHHH
Confidence 3569999999999999998888866
No 51
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-40 Score=331.87 Aligned_cols=361 Identities=15% Similarity=0.166 Sum_probs=269.6
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+|+| .|||+||||.++ ..+|+ +||+|.+|+.+|+++..+... .+..++...+|+++|++.+
T Consensus 24 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH-~~p~v~~Ai~~ql~~~~~~~~----~~~~~~~~~~lae~L~~~~ 98 (445)
T PRK08593 24 YPLVIDHGYGATLTDVDGKTYIDLLASASSQNVGH-APPRVVEAIKAQADKFIHYTP----AYMYHEPLVRLAKKLCELA 98 (445)
T ss_pred CCceEEeeeeCEEEeCCCCEEEECCccHHhhcCCC-CCHHHHHHHHHHHHhccCccc----cccCCHHHHHHHHHHHHhC
Confidence 37889999999999 599999999764 24566 489999999999998644321 1125788899999999987
Q ss_pred CC---CcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhcCCe-------------EEEecCCC----
Q psy15447 139 GL---EETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIASRCK-------------VQYFKHNN---- 195 (457)
Q Consensus 139 g~---~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~g~~-------------~~~~~~~d---- 195 (457)
+. ++++|++||++|++.|++. ++++.++|..+..||+.+..++.+++.. +..++.+|
T Consensus 99 p~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 178 (445)
T PRK08593 99 PGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRG 178 (445)
T ss_pred CCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccc
Confidence 52 4778889999999999985 4567778889999999998887766521 22233222
Q ss_pred ------H-------HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCccc
Q psy15447 196 ------M-------QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSF 258 (457)
Q Consensus 196 ------~-------~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~ 258 (457)
. +++++.+.+.. ..+.+++|++||+++++|.+.| +++|+++|++||++||+||+++.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg 252 (445)
T PRK08593 179 MYEEPDANFVEEYLAPLKEMFEKYL------PADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQG 252 (445)
T ss_pred cccCCcHHHHHHHHHHHHHHHHhhc------CCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhC
Confidence 2 22333332210 1256899999999999998876 99999999999999999999842
Q ss_pred ccccCCCCc-cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH
Q psy15447 259 GTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL 335 (457)
Q Consensus 259 g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~ 335 (457)
+|++|.+ ..+++|+.| ||+ |++|++|. ++|++++++++++.+.... +.++.+.+|+.|++++++|+.+
T Consensus 253 --~GrtG~~~a~~~~gv~p---Di~--t~gK~l~~G~p~gav~~~~~i~~~~~~~~--~~~T~~~~pl~~aaa~a~l~~l 323 (445)
T PRK08593 253 --LGRTGKWSSISHFNITP---DLM--SFGKSLAGGMPMSAIVGRKEIMESLEAPA--HLFTTGANPVSCAAALATIDMI 323 (445)
T ss_pred --CCcCchHHHHHhcCCCC---CEe--eecccccCCcccEEEEEcHHHHhhhccCC--CCCCCCCCHHHHHHHHHHHHHH
Confidence 3455554 457889987 676 89999963 4688999999998875332 3455567999999999999999
Q ss_pred hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCc
Q psy15447 336 KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLD 414 (457)
Q Consensus 336 ~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~ 414 (457)
++. ++.+++++++++|++.|+++....++....+..+.++.+.+..+... ..+......+++.|+++||++.+..
T Consensus 324 ~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~--- 399 (445)
T PRK08593 324 EDE-SLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAVA--- 399 (445)
T ss_pred Hhc-cHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEeccC---
Confidence 765 58899999999999999874321222112235567777776532111 1112245679999999999986532
Q ss_pred cccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 415 QEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 415 ~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
.+.+|++|++.+|++||++++++++++++++..
T Consensus 400 ------~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 400 ------GNVLRFQPPLVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred ------CCEEEEECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 378999999999999999999999999987643
No 52
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2e-40 Score=331.88 Aligned_cols=363 Identities=14% Similarity=0.146 Sum_probs=266.5
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+||| .|||+||||.++ ..+|+. ||+|.+|+.+|+.+..+.. .....++...+|+++|++.+
T Consensus 38 ~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~~----~~~~~~~~~~~la~~l~~~~ 112 (443)
T PRK06058 38 LPVYVARAGGGIVEDVDGNRLIDLGSGIAVTSVGNS-APRVVEAVREQVARFTHTC----FMVTPYEGYVAVAEQLNRLT 112 (443)
T ss_pred CCceEEeeeeeEEEeCCCCEEEEcCcchhhhccCCC-CHHHHHHHHHHHHhccCcc----ccccCCHHHHHHHHHHHHhC
Confidence 47889999999999 599999999875 345654 8999999999999854221 11235788899999999987
Q ss_pred CC---CcEEEecccHHHHHHHHH---hhcCCCCEEEEeCcccHHHHHHHHhcCC-------------eEEE----ecCCC
Q psy15447 139 GL---EETALYSFGFSTSASAIA---AYVKRNDAVFVDENINFAIQTGLIASRC-------------KVQY----FKHNN 195 (457)
Q Consensus 139 g~---~~~i~~~sG~~a~~~ai~---a~~~~gd~v~~~~~~h~~~~~~~~~~g~-------------~~~~----~~~~d 195 (457)
+. ++++|++||++|++.|++ .++++..+|.....+|+.+..++.+++. .+.. ++.++
T Consensus 113 p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (443)
T PRK06058 113 PGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRD 192 (443)
T ss_pred CCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCccccc
Confidence 52 578899999999999998 4567777888899999999888776541 1111 12222
Q ss_pred H--------HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccC
Q psy15447 196 M--------QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGS 263 (457)
Q Consensus 196 ~--------~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~ 263 (457)
+ +.+++.++..... ..++++++|++||+++.+|.+.| +++|+++|++||++||+||+++. +|+
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~---~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tG--fgR 267 (443)
T PRK06058 193 PKGLATDGEEAAARAITVIEKQ---VGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTG--FAR 267 (443)
T ss_pred ccccccchHHHHHHHHHHHHHh---hCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--CCc
Confidence 1 2223333211100 00256899999999998888875 89999999999999999999852 345
Q ss_pred CCCc-cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcH
Q psy15447 264 TGHG-VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPS 340 (457)
Q Consensus 264 ~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~ 340 (457)
+|.+ ..+++|+.| ||+ +++|++|+ +.|++++++++++.+....+..+| +.+|++|++++++|+.+++. +
T Consensus 268 tG~~fa~~~~gv~P---Div--~~gK~l~~G~Pi~av~~~~~i~~~~~~~~~~~T~--~gnpl~~aaa~a~L~~~~~~-~ 339 (443)
T PRK06058 268 TGAWFACEHEGIVP---DLI--TTAKGIAGGLPLSAVTGRAEIMDAPHPGGLGGTY--GGNPVACAAALAAIETIEED-D 339 (443)
T ss_pred ChhhhHHHhcCCCC---CEE--EEcccccCCCccEEEEEcHHHHhhccCCCCCCCC--CCCHHHHHHHHHHHHHHHHc-C
Confidence 5544 457889988 777 78999963 347889999998887644433344 46999999999999998765 4
Q ss_pred HHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCC
Q psy15447 341 LLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQ 420 (457)
Q Consensus 341 ~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~ 420 (457)
+.+++++++++|.+.|+++....++.....+.+.++.+.+..+.....+......+.+.|+++||++.+... .
T Consensus 340 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~-------~ 412 (443)
T PRK06058 340 LVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCGT-------Y 412 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccCC-------C
Confidence 889999999999999987432223222224567888887754311111122456788999999999976431 1
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 421 KPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 421 ~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
.+++|+.|++.+|++||+++++++++++++
T Consensus 413 ~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 413 GNVIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred CCEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 379999999999999999999999999865
No 53
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=1.9e-40 Score=331.15 Aligned_cols=382 Identities=14% Similarity=0.155 Sum_probs=283.7
Q ss_pred ChhhHHHHHcccCCCCCCCccccccc-cCCceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHh
Q psy15447 35 HTINVDALINNWTPEPIVSKAEKFKD-VSSKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDK 109 (457)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~ 109 (457)
.++++.+..++..|.+..++.....+ ...|+++++++|+|+| .|||+||||.++ ..+|++ ||+|.+++.+|+++
T Consensus 52 ~S~~l~~ra~~~~pgGv~~~~r~~~~~~~~p~~~~~a~G~~l~D~dG~~yiD~~~g~g~~~lGh~-~p~v~~av~~ql~~ 130 (474)
T PLN02482 52 KSEEIFKAAKELMPGGVNSPVRAFKSVGGQPIVFDRVKGSYAWDVDGNEYIDYVGSWGPAIIGHA-DDEVLAALAETMKK 130 (474)
T ss_pred HHHHHHHHHHhhCCCCCCCcchhhcccCCCCeeEEEeeeCEEEECCCCEEEEecccccccccCCC-CHHHHHHHHHHHhh
Confidence 36788899999999998877664432 2468899999999999 599999999764 335554 89999999999997
Q ss_pred cCCCCCCCCCcccChHHHHHHHHHHHhhcC-CCcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHH--HHHh
Q psy15447 110 NGVGSCGPRGFYGTNVVHLDLENDIASFMG-LEETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQT--GLIA 183 (457)
Q Consensus 110 ~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-~~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~--~~~~ 183 (457)
... . ...++...+|+++|++.++ .+.+.|++||++|++.|++. ++++.++|.....||+.+.. ....
T Consensus 131 ~~~-~------~~~~~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~ 203 (474)
T PLN02482 131 GTS-F------GAPCLLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAG 203 (474)
T ss_pred CCC-C------CCCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcC
Confidence 421 1 1256788899999999774 67889999999999999975 45677788888899996422 1111
Q ss_pred c-----------C------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHH
Q psy15447 184 S-----------R------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSL 242 (457)
Q Consensus 184 ~-----------g------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l 242 (457)
+ + ..+..+++||++++++.+++.. +.+++||+||+++++|.+.| +++|+++
T Consensus 204 ~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~--------~~iAavI~Epv~g~~G~i~p~~~fl~~lr~l 275 (474)
T PLN02482 204 SGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEANK--------GEIAAVILEPVVGNSGFIVPKKEFLEGLREI 275 (474)
T ss_pred CCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHHhCC--------CceEEEEECCCCCCCCCcCCCHHHHHHHHHH
Confidence 1 1 1356688999999999997532 57899999999999999887 6799999
Q ss_pred HHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCc-ceecCC
Q psy15447 243 RSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSG-YCFSAS 319 (457)
Q Consensus 243 ~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~-~~~~~~ 319 (457)
|++||++||+||++...+.|. .+..+++|+.| |++ +|+|++|+ +.|.+++++++++.+...... +..+.+
T Consensus 276 c~~~g~lLI~DEV~tGfR~g~--~ga~~~~gv~P---Di~--t~gK~lggG~Pigav~g~~ei~~~~~~~~~~~~~~T~~ 348 (474)
T PLN02482 276 TKENGALLVFDEVMTGFRIAY--GGAQEYFGITP---DLT--TLGKVIGGGLPVGAYGGRREIMEMVAPAGPMYQAGTLS 348 (474)
T ss_pred HHHcCCEEEEeccccCeecCc--chHhHHhCCCC---CEE--EecchhhCCCceEEEEEcHHHHHhhccCCCcccccCcc
Confidence 999999999999985324442 35567899987 675 89999963 346679999999988532211 122334
Q ss_pred CcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc-----h-HHHHHHH
Q psy15447 320 LPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD-----E-VASKKLL 393 (457)
Q Consensus 320 ~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~-~~~~~~~ 393 (457)
.+|+.|++++++|+++++. ++.++++++.++|++.|+++....++++.......++.+.+..+.. . ..+....
T Consensus 349 gnpl~~aAala~L~~l~~~-~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~ 427 (474)
T PLN02482 349 GNPLAMTAGIHTLKRLQQP-GTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKF 427 (474)
T ss_pred hhHHHHHHHHHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEEEEEEecCCccChhhhccCCHHHH
Confidence 6999999999999999754 5899999999999999987432233333212223466666643210 0 1122245
Q ss_pred HHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 394 QTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 394 ~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
..+.+.|+++||++.+..++ . + .|++.||++|||+++++++++++++
T Consensus 428 ~~~~~~l~~~Gv~~~~~~~~--------~--~-~psl~ht~~dId~~l~al~~~l~~~ 474 (474)
T PLN02482 428 ARFHRGMLEEGVYLAPSQFE--------A--G-FTSLAHTEEDIDFTIAAAERVLARI 474 (474)
T ss_pred HHHHHHHHHCCeEEeccCCC--------C--C-cCCCCCCHHHHHHHHHHHHHHHHhC
Confidence 67899999999999876532 1 1 3889999999999999999998753
No 54
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=100.00 E-value=2.5e-40 Score=328.98 Aligned_cols=347 Identities=19% Similarity=0.221 Sum_probs=268.6
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeecCCccCCC---CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFATHNYLSFV---ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s~~~l~~~---~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++.+++|.++|+ ||++||||+|+ |+++. .||+|.+|+.++++++++.+ +.+ .++.+.+|+++|++++
T Consensus 19 ~~~~~~~~~g~~~~~~~g~~~lD~~s~-~~~~~~Gh~~p~v~~a~~~~~~~~~~~~---~~~--~~~~~~~l~~~l~~~~ 92 (401)
T TIGR01885 19 LPVVFSKAEGVHVWDVEGKRYLDFLSA-YSAVNQGHCHPKIVKALTEQAQKLTLSS---RAF--YNDVFGEFAEYVTKLF 92 (401)
T ss_pred CCceEEeeecCEEEeCCCCEEEEcccC-HhhccCCCCCHHHHHHHHHHHHhccccc---ccc--CCHHHHHHHHHHHhhc
Confidence 367788999999995 99999999984 54443 48999999999999876432 211 5788999999999999
Q ss_pred CCCcEEEecccHHHHHHHHHhhc----------CCCCEEEE-eCcccHHHHHHHHhcC------------CeEEEecCCC
Q psy15447 139 GLEETALYSFGFSTSASAIAAYV----------KRNDAVFV-DENINFAIQTGLIASR------------CKVQYFKHNN 195 (457)
Q Consensus 139 g~~~~i~~~sG~~a~~~ai~a~~----------~~gd~v~~-~~~~h~~~~~~~~~~g------------~~~~~~~~~d 195 (457)
|.+.+++++||++|++.|++..+ ..++.|+. ...+|+++..++.+++ ..+..++++|
T Consensus 93 ~~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 172 (401)
T TIGR01885 93 GYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYNN 172 (401)
T ss_pred CCCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCCC
Confidence 99999999999999999998742 12345554 4556888888888764 2356788999
Q ss_pred HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCccc-c
Q psy15447 196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVT-E 270 (457)
Q Consensus 196 ~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~-~ 270 (457)
++++++.+++.. +.+++|++||+++++|.+.| +++|+++|++||+++|+||+|. | +|++|.++. +
T Consensus 173 ~~~le~~l~~~~--------~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g-~g~~G~~~~~~ 242 (401)
T TIGR01885 173 LEALEEALEDHG--------PNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQT-G-LGRTGKLLCVD 242 (401)
T ss_pred HHHHHHHHHhcC--------CCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCccchhhHHh
Confidence 999999997532 46789999999999999987 9999999999999999999984 3 566776643 4
Q ss_pred ccCCCCCCccEEEecCcccccCc---ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHH
Q psy15447 271 YFGVSTEEVDMIIGSLEHALGSV---GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLRE 347 (457)
Q Consensus 271 ~~~~~~~~~Di~~~s~sK~lg~~---gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~ 347 (457)
++++.| |++ +++|++++. .|++++++++++.++......+|+ .+|+.++++.++|+.+++. .+.+++++
T Consensus 243 ~~~~~~---di~--~~gK~l~~g~~~ig~v~~~~~i~~~~~~~~~~~t~~--~~p~~~~aa~a~L~~i~~~-~l~~~~~~ 314 (401)
T TIGR01885 243 HENVKP---DIV--LLGKALSGGVYPVSAVLADDDVMLTIKPGEHGSTYG--GNPLACAVAVAALEVLEEE-KLAENAEK 314 (401)
T ss_pred hcCCCC---CEE--EeeccccCCCCCcEEEEEcHHHHhhccCCCCCCCCC--CCHHHHHHHHHHHHHHHhc-cHHHHHHH
Confidence 566655 666 688999642 367889999988876533333443 4899999999999998764 47789999
Q ss_pred HHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEE
Q psy15447 348 KCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRIT 427 (457)
Q Consensus 348 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~ 427 (457)
+++++++.|+++. .++....++.+.++.+.++.+.. .....+++++|.++||++.+.. .+.+||+
T Consensus 315 ~~~~~~~~L~~l~--~~~~~~~~g~g~~~~i~~~~~~~----~~~~~~l~~~l~~~Gv~v~~~~---------~~~lRi~ 379 (401)
T TIGR01885 315 LGEIFRDQLKKLP--KPIITEVRGRGLLNAIVIDESKT----GRTAWDLCLKLKEKGLLAKPTH---------GNIIRLA 379 (401)
T ss_pred HHHHHHHHHHhcc--CCceeEEeecCeeEEEEeccCcc----hhHHHHHHHHHHhCCEEEEecC---------CCEEEEe
Confidence 9999999999842 12211113467777777754320 0145689999999999987543 4789999
Q ss_pred ecCCCCHHHHHHHHHHHHHHH
Q psy15447 428 CNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 428 ~~~~~t~edi~~~~~~l~~~~ 448 (457)
|++.+|++||++++++|++++
T Consensus 380 p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 380 PPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred CCccCCHHHHHHHHHHHHHHh
Confidence 999999999999999998875
No 55
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=4e-40 Score=328.82 Aligned_cols=353 Identities=14% Similarity=0.119 Sum_probs=268.6
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+||| .||++||||.++ ..+|++ ||+|.+|+++|+++...... ...+++...+|+++|++.+
T Consensus 24 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~~~----~~~~~~~~~~la~~l~~~~ 98 (423)
T PRK05964 24 PPIPIVRAEGAYLYLADGRELIDAISSWWVATHGHN-HPYIDQAIREQLDRLDHVIF----AGFTHEPAERLAQRLVALT 98 (423)
T ss_pred CCeeEEeccccEEEeCCCCEEEEcchhHHhccCCCC-CHHHHHHHHHHHhhCCCccc----cccCCHHHHHHHHHHHHhC
Confidence 57899999999999 599999999764 345664 89999999999998643221 0125678899999999988
Q ss_pred C--CCcEEEecccHHHHHHHHHhh---------cCCCCEEEEeCcccHHHHHHHHhcCC--------------eEEEecC
Q psy15447 139 G--LEETALYSFGFSTSASAIAAY---------VKRNDAVFVDENINFAIQTGLIASRC--------------KVQYFKH 193 (457)
Q Consensus 139 g--~~~~i~~~sG~~a~~~ai~a~---------~~~gd~v~~~~~~h~~~~~~~~~~g~--------------~~~~~~~ 193 (457)
+ .++++|++||++|++.|++.. .++.++|.....+|+.+...+.+++. ....+++
T Consensus 99 p~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (423)
T PRK05964 99 PGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPP 178 (423)
T ss_pred CCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCc
Confidence 5 568899999999999999864 23556788899999988777665432 2334555
Q ss_pred CC-----HHHHHHHHHhhchhcccCCCCccEEEEEec-CCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccC
Q psy15447 194 NN-----MQHLEELLRQQDERDTLNSKVTKKFIIVEG-VYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGS 263 (457)
Q Consensus 194 ~d-----~~~le~~l~~~~~~~~~~~~~~~~~vi~e~-v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~ 263 (457)
+| ++++++.+++.. +.+++|++|| +++.+|...| +++|+++|++||++||+||+|+. +|+
T Consensus 179 ~d~~~~~~~~l~~~l~~~~--------~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg--~gr 248 (423)
T PRK05964 179 DGYEQATLDALEALLEKHA--------GEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATG--FGR 248 (423)
T ss_pred chhHHHHHHHHHHHHHhCC--------CcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhC--CCc
Confidence 66 778888886432 5688999999 6888887765 89999999999999999999842 355
Q ss_pred CCCcc-ccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhh--CCccee--cCCCcHHHHHHHHHHHHHH
Q psy15447 264 TGHGV-TEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLS--GSGYCF--SASLPPFLAVAANKALHLL 335 (457)
Q Consensus 264 ~g~~~-~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~aaa~a~l~~~ 335 (457)
+|.++ .+++++.| |++ +++|++++ +.|++++++++++.+... ...+.+ +.+.+|+.|++++++++.+
T Consensus 249 ~G~~~a~~~~~v~p---Di~--~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l 323 (423)
T PRK05964 249 TGTLFACEQAGVSP---DIM--CLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLF 323 (423)
T ss_pred CcchhHHHhcCCCC---Cee--eeehhhhcCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHH
Confidence 66553 47788877 676 79999953 357789999999887532 111122 2246999999999999998
Q ss_pred hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc
Q psy15447 336 KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ 415 (457)
Q Consensus 336 ~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~ 415 (457)
++. ++.++++++.+++++.|+++...+.+.- .+..+.++.+.+.++.. ......+.+.|.++||++.+..
T Consensus 324 ~~~-~~~~~~~~~g~~l~~~l~~l~~~~~i~~-vrg~Gl~~~i~l~~~~~----~~~~~~l~~~l~~~Gv~v~~~~---- 393 (423)
T PRK05964 324 EDE-PVLERVAALSAGLAEGLEPFRDLPGVAD-VRVLGAIGAVELDRPVL----ERDGPALRAFALERGVLLRPLG---- 393 (423)
T ss_pred Hhc-CHHHHHHHHHHHHHHHHHhhccCCCeEE-eecccEEEEEEeccCcc----hhHHHHHHHHHHHCCeEEEecC----
Confidence 765 4789999999999999987433333321 13457777887765320 0135678999999999987532
Q ss_pred ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 416 EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 416 ~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+.+||+|++.+|++|||+++++++++++++
T Consensus 394 ------~~lR~~p~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 394 ------NTIYLMPPYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred ------CEEEEeCCcccCHHHHHHHHHHHHHHHhhC
Confidence 689999999999999999999999998764
No 56
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=4.3e-40 Score=329.76 Aligned_cols=359 Identities=16% Similarity=0.146 Sum_probs=267.5
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecCC---ccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATHN---YLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+||| .|||+||||.++. .+|++ ||+|.+|+.+|++++.+... ....++...+|+++|++++
T Consensus 38 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~ql~~l~~~~~----~~~~~~~~~~lae~L~~~~ 112 (460)
T PRK06916 38 DPLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQ-VPELDEAIREQLNKIAHSTL----LGLANVPSILLAEKLIEVV 112 (460)
T ss_pred CCeeEEeccccEEEeCCCCEEEEcchhHHHhhcCCC-CHHHHHHHHHHHHhCCCccc----cccCCHHHHHHHHHHHHhC
Confidence 58899999999999 4999999998752 34654 89999999999998654322 1125788899999999987
Q ss_pred C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCC-
Q psy15447 139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHN- 194 (457)
Q Consensus 139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~- 194 (457)
+ .++++|++||++|++.|++... ++..+|.....||+.+..++.+++.. +..++.+
T Consensus 113 p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~ 192 (460)
T PRK06916 113 PEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPY 192 (460)
T ss_pred CCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCc
Confidence 6 3688999999999999998643 24457888999999998888776522 1112211
Q ss_pred ----------------CHHHHHHHHHhhchhcccCCCCccEEEEEec-CCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447 195 ----------------NMQHLEELLRQQDERDTLNSKVTKKFIIVEG-VYMNSADICP----LKDILSLRSKYQARIFVD 253 (457)
Q Consensus 195 ----------------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~-v~~~~G~i~~----l~~i~~l~~~~g~~li~D 253 (457)
+++++++.+++. ++++++|++|| +++.+|.+.| +++|+++|++||++||+|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~--------~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~D 264 (460)
T PRK06916 193 TYRSPYGNDKAEIVKKHLEELEELLKEK--------HEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITD 264 (460)
T ss_pred ccccccCCChHHHHHHHHHHHHHHHHhC--------CCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEee
Confidence 234556666532 25789999999 6988888765 899999999999999999
Q ss_pred cCcccccccCCCCc-cccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhh-----CCcceecCCCcHHH
Q psy15447 254 ESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLS-----GSGYCFSASLPPFL 324 (457)
Q Consensus 254 Ea~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 324 (457)
|++.. +|++|.+ ..+++|+.| ||+ +++|++|+ +-|++++++++++.+... ...+..+.+.+|+.
T Consensus 265 EV~TG--~GRtG~~~a~~~~gv~P---Div--~~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~ 337 (460)
T PRK06916 265 EVATG--FGRTGKMFACEHENVTP---DIM--TAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLG 337 (460)
T ss_pred chhhC--CCcCchhhHHHhcCCCC---Cee--eeehhhhcCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHH
Confidence 99742 3455554 457899988 777 79999962 346788899988876421 11122233459999
Q ss_pred HHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHHH
Q psy15447 325 AVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDMC 400 (457)
Q Consensus 325 ~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l 400 (457)
|++++++|+.+++. ++.++++++++++++.|+++...+.+. .....+.++.+.+..+... .........+.+.|
T Consensus 338 ~aaa~a~l~~l~~~-~l~~~~~~~g~~l~~~l~~l~~~~~v~-~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~ 415 (460)
T PRK06916 338 CAVALANLELYEKT-NLIEQVARKTEYVATQLEDLFALKHVG-DIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRS 415 (460)
T ss_pred HHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHhhcCCCeE-EeecCCceeeEEeecccccccCCCchhhHHHHHHHHH
Confidence 99999999999765 488999999999999998854322221 1245678888877643211 01111245788999
Q ss_pred HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 401 IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 401 ~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
+++||++.+. .+.+|+.|++.+|++||++++++++++++++..
T Consensus 416 ~~~Gvl~~~~----------g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06916 416 RELGMLTRPL----------GNTIVFMPPLASTIDELDEMLRILYKAISDVTE 458 (460)
T ss_pred HHCCeEEEec----------CCEEEEeCCcccCHHHHHHHHHHHHHHHHhhcc
Confidence 9999998653 268999999999999999999999999987653
No 57
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=6.2e-40 Score=328.41 Aligned_cols=356 Identities=13% Similarity=0.108 Sum_probs=267.2
Q ss_pred ceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447 64 KYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG 139 (457)
Q Consensus 64 ~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g 139 (457)
|+++++++|+|+|+ |||+||||.++ ..+|+. ||+|.+|+++|+++..+.... ...++...+|+++|+++.+
T Consensus 30 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~ql~~l~~~~~~----~~~~~~~~~lae~L~~~~p 104 (466)
T PRK07030 30 LIPIRRGEGVWLEDFEGKRYLDAVSSWWVNVFGHA-NPRINQRIKDQVDQLEHVILA----GFSHEPVIELSERLVKITP 104 (466)
T ss_pred CceEEeeeccEEEECCCCEEEEcchhHHhhcCCCC-CHHHHHHHHHHHHhcCCcccc----ccCCHHHHHHHHHHHHhCC
Confidence 46799999999995 99999999875 234554 899999999999986543221 1257888999999999874
Q ss_pred --CCcEEEecccHHHHHHHHHhh---------cCCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCC--
Q psy15447 140 --LEETALYSFGFSTSASAIAAY---------VKRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHN-- 194 (457)
Q Consensus 140 --~~~~i~~~sG~~a~~~ai~a~---------~~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~-- 194 (457)
.++++|++||++|++.|++.. .++..+|.....+|+.+..++.+++.. +..++.+
T Consensus 105 ~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~ 184 (466)
T PRK07030 105 PGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDC 184 (466)
T ss_pred CCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCc
Confidence 468899999999999999865 234557888999999998888776532 1122221
Q ss_pred ---------------CHHHHHHHHHhhchhcccCCCCccEEEEEec-CCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q psy15447 195 ---------------NMQHLEELLRQQDERDTLNSKVTKKFIIVEG-VYMNSADICP----LKDILSLRSKYQARIFVDE 254 (457)
Q Consensus 195 ---------------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~-v~~~~G~i~~----l~~i~~l~~~~g~~li~DE 254 (457)
+++++++.+.+. ++.+++|++|| +++.+|.+.| +++|+++|++||++||+||
T Consensus 185 ~~~~~~~~~~~~~~~~l~~le~~~~~~--------~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DE 256 (466)
T PRK07030 185 YLRPEGMSWEEHSRRMFAHMEQTLAEH--------HDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDE 256 (466)
T ss_pred cccccCCCHHHHHHHHHHHHHHHHHhC--------CCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEee
Confidence 245566666532 26789999999 6988888765 8999999999999999999
Q ss_pred Cc-ccccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhh-----CCcceecCCCcHHHH
Q psy15447 255 SV-SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLS-----GSGYCFSASLPPFLA 325 (457)
Q Consensus 255 a~-~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 325 (457)
++ ++|++|. .+..+++|+.| ||+ +++|++|+ +.|++++++++++.+... ...+..+.+.+|++|
T Consensus 257 V~TGfGRtG~--~~a~~~~gv~P---Div--~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~ 329 (466)
T PRK07030 257 IAVGFGRTGT--MFACEQAGIRP---DFL--CLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLAC 329 (466)
T ss_pred hhhCcCcccc--chHHHhcCCCC---CEE--eeehhccCCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHH
Confidence 96 4655543 34458899988 787 79999962 457788999998877421 111223334599999
Q ss_pred HHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHHHH
Q psy15447 326 VAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDMCI 401 (457)
Q Consensus 326 aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l~ 401 (457)
++++++|+++++++ +.++.++++++|++.|+++...+.+.-+ ...+.++.+.+..+... ........++.+.|+
T Consensus 330 aaa~a~L~~i~~~~-l~~~~~~~G~~l~~~L~~l~~~~~v~~v-rG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~ 407 (466)
T PRK07030 330 AAALATLDIFEQDN-VIENNRALARRMAEATAHLADHPHVAEV-RQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHAL 407 (466)
T ss_pred HHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHhcCCCEEEe-EeceeEEEEEeccCccccccCcchhHHHHHHHHHHH
Confidence 99999999998764 8899999999999999885433332222 45678888887543211 001113457889999
Q ss_pred HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 402 QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 402 ~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
++|+++.+. .+.+|+.|++.+|++||++++++++++++++
T Consensus 408 ~~Gvl~~~~----------g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 408 ERGALLRPL----------GSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred HCCeEEEec----------CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 999998653 2689999999999999999999999999887
No 58
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=5.3e-40 Score=327.75 Aligned_cols=354 Identities=15% Similarity=0.190 Sum_probs=264.2
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|.++++++|+|+| .|||+||||.++ ..+|+ +||+|.+|+.+|++++.+.+. +...++...+|+++|++++
T Consensus 31 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~l~~~~~----~~~~~~~~~~la~~L~~~~ 105 (445)
T PRK09221 31 APRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGH-GRPEIVEAVARQAATLDYAPA----FQMGHPLAFELAERLAELA 105 (445)
T ss_pred CCceEEeccccEEEeCCCCEEEEccccHhhccCCC-CCHHHHHHHHHHHHhccCccc----cccCCHHHHHHHHHHHHhC
Confidence 47889999999999 599999999765 34565 489999999999998654322 1125788899999999987
Q ss_pred C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCCC
Q psy15447 139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHNN 195 (457)
Q Consensus 139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~d 195 (457)
+ .++++|++||++|++.|++... ++..+|.....||+.+..++.+++.. +..++.+.
T Consensus 106 p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (445)
T PRK09221 106 PGGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTL 185 (445)
T ss_pred CCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCc
Confidence 5 4688999999999999998643 23457778899999988777665421 12222211
Q ss_pred ------------------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447 196 ------------------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVD 253 (457)
Q Consensus 196 ------------------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~D 253 (457)
.+++++.++... .+++++|++||+++.+|.+.| +++|+++|++||++||+|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-------~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~D 258 (445)
T PRK09221 186 DLPENAFSKGQPEHGAELADDLERLVALHD-------ASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFD 258 (445)
T ss_pred cccccccCCChHHHHHHHHHHHHHHHHhcC-------CCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 246666665432 257899999999999999988 999999999999999999
Q ss_pred cCcccccccCCCCc-cccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhh-------CCcceecCCCcH
Q psy15447 254 ESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLS-------GSGYCFSASLPP 322 (457)
Q Consensus 254 Ea~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~-------~~~~~~~~~~~~ 322 (457)
|+++. +|++|.+ ..+++++.| ||+ +++|+++. +.|++++++++++.+... .++++| +.+|
T Consensus 259 EV~tG--~GRtG~~~~~~~~gv~P---Di~--~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~--~~~p 329 (445)
T PRK09221 259 EVITG--FGRLGAAFAAERFGVTP---DII--TFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTY--SAHP 329 (445)
T ss_pred ehhhC--CCcCchhhHHHhcCCCC---CEE--EeccccccCcccceeeEEcHHHHHhhccCcccccccccccCC--CcCH
Confidence 99842 4555555 458899987 676 89999953 357788899988877531 123333 4699
Q ss_pred HHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH
Q psy15447 323 FLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ 402 (457)
Q Consensus 323 ~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~ 402 (457)
+.|++++++|+++++. .+.+++++++++|++.|+++...+.+.- .+..+.+..+.+....... ...+..+.+.|++
T Consensus 330 l~~aaa~a~L~~i~~~-~l~~~~~~~g~~l~~~l~~l~~~~~v~~-vrg~Gl~~~v~~~~~~~~~--~~~~~~~~~~~~~ 405 (445)
T PRK09221 330 VACAAGLATLDIYREE-DLFERAAELAPYFEDAVHSLKGLPHVID-IRNIGLVAGIELAPRPGAP--GARGYEAFMKCFE 405 (445)
T ss_pred HHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHhhccCCCEEE-EecCceEEEEEEecccccc--cchHHHHHHHHHH
Confidence 9999999999999766 4889999999999999988432222211 1344566666665321000 0134578899999
Q ss_pred cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 403 AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 403 ~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+||++.+. .+.+||+|++.+|++||++++++|+++++++
T Consensus 406 ~Gv~~~~~----------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 406 KGLLVRYT----------GDTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred CCeEEeec----------CCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 99998643 3689999999999999999999999998764
No 59
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=5.8e-40 Score=327.10 Aligned_cols=380 Identities=14% Similarity=0.165 Sum_probs=284.0
Q ss_pred ChhhHHHHHcccCCCCCCCccccccc--cCCceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHH
Q psy15447 35 HTINVDALINNWTPEPIVSKAEKFKD--VSSKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCID 108 (457)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~ 108 (457)
++.+..+.+.++.|.+..++...... ...|+++++++|+|+| .||++||||.++ ..+|+ +||+|.+|+.+|+.
T Consensus 5 ~s~~~~~~a~~~~p~g~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~ 83 (428)
T PRK12389 5 KSEALHQEALEHIVGGVNSPSRSYKAVGGGAPVVMERGKGAYFYDVDGNKYIDYLAAYGPIITGH-AHPHITKAITEAAE 83 (428)
T ss_pred hhHHHHHHHHhhCCCCCCCccccccccCCCCCeEEEeccCCEEEeCCCCEEEEccccccccccCC-CCHHHHHHHHHHHH
Confidence 46688888999999988765443321 1357899999999999 499999999764 23555 48999999999998
Q ss_pred hcCCCCCCCCCcccChHHHHHHHHHHHhhcC-CCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhc
Q psy15447 109 KNGVGSCGPRGFYGTNVVHLDLENDIASFMG-LEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIAS 184 (457)
Q Consensus 109 ~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~ 184 (457)
+.... ...++...+|+++|++.++ .++++|++||++|++.|++.. +++..+|.....+|+.+...+..+
T Consensus 84 ~~~~~-------~~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~ 156 (428)
T PRK12389 84 NGVLY-------GTPTELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAA 156 (428)
T ss_pred hCCcc-------CCCCHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhc
Confidence 74321 1257888999999998764 578899999999999999854 456678888999999887766654
Q ss_pred C-------------------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHH
Q psy15447 185 R-------------------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILS 241 (457)
Q Consensus 185 g-------------------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~ 241 (457)
+ ..+..++++|++.+++.+++.. +++++|++||+++++|.+.| +++|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--------~~vaavi~EPv~g~~G~~~p~~~yl~~l~~ 228 (428)
T PRK12389 157 GSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWG--------DEVAAVLVEPIVGNFGIVEPKPGFLEAVNE 228 (428)
T ss_pred CCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcC--------CcEEEEEEeCCCCCCCCcCCCHHHHHHHHH
Confidence 3 1345677889999999987543 46899999999999999888 999999
Q ss_pred HHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCc-ceecC
Q psy15447 242 LRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSG-YCFSA 318 (457)
Q Consensus 242 l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~-~~~~~ 318 (457)
+|++||++||+||+++.++++. .+..+++|+.| ||+ |++|++|+ +.|++++++++++.+...... +..+.
T Consensus 229 lc~~~g~llI~DEV~tG~Rt~~--~~a~~~~gv~P---Div--t~gK~lggG~Pi~av~~~~~i~~~~~~~~~~~~~~T~ 301 (428)
T PRK12389 229 LAHEAGALVIYDEVITAFRFMY--GGAQDLLGVEP---DLT--ALGKIIGGGLPIGAYGGRKDIMEQVAPLGPAYQAGTM 301 (428)
T ss_pred HHHHcCCEEEEEccccccccCc--chhhHHhCCCC---Cee--eechhhcCCCceeEEeEHHHHHhhhccCCCcccccCC
Confidence 9999999999999986435432 24567789988 676 89999963 346678999999887532211 22233
Q ss_pred CCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec-cCCCCeEEEEecCCcch------HHHHH
Q psy15447 319 SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG-HRDTPLKYLYLQKSDDE------VASKK 391 (457)
Q Consensus 319 ~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~------~~~~~ 391 (457)
+.||++||+++++|++++++ ++.+++++++++|++.|+++....++.... ...+ ++.+.+..+... ..+..
T Consensus 302 ~gnpl~~Aaala~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~gi~~~~~~~~~~~~~~~~~~~ 379 (428)
T PRK12389 302 AGNPASMAAGIACLEVLQQE-GVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG-ALTVYFTDEKVTNYDQAERSDGE 379 (428)
T ss_pred ccCHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc-EEEEEEeCCCCCChhhhcccCHH
Confidence 56999999999999999765 488999999999999998743212321211 2233 666666432110 00112
Q ss_pred HHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 392 LLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 392 ~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
....+.+.|+++||++.+..+ +. +.|++.+|++|++++++++++++++
T Consensus 380 ~~~~~~~~l~~~Gv~~~~~~~---------~~--~~~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 380 AFGKFFKLMLNQGINLAPSKY---------EA--WFLTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred HHHHHHHHHHHCCcEeecCCC---------CC--eeecCCCCHHHHHHHHHHHHHHHHh
Confidence 456789999999999976532 22 3578999999999999999999865
No 60
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=3e-40 Score=328.57 Aligned_cols=343 Identities=15% Similarity=0.194 Sum_probs=270.9
Q ss_pred ceeeecCCCcEEE-ECCeeeEEeec---CCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447 64 KYVVDQKSGYIVN-INGIPCINFAT---HNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG 139 (457)
Q Consensus 64 ~~~i~~~~g~~~~-~~G~~~id~~s---~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g 139 (457)
|.++++++|.++| .||++||||.+ ++++|+ +||++.+++.+++++++.... .| .++...+|+++|++++|
T Consensus 26 ~~~~~~~~G~~~~d~dg~~~lD~~s~~~~~~lG~-~~p~v~~ai~~~~~~~~~~~~----~~-~~~~~~~la~~l~~~~~ 99 (398)
T PRK03244 26 PLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGH-AHPAVVEAVTRQLATLGHVSN----LF-ATEPQIALAERLVELLG 99 (398)
T ss_pred CceEEEeeecEEEECCCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhccCccC----cc-CCHHHHHHHHHHHHhCC
Confidence 6789999999999 59999999987 467787 489999999999998764321 12 35667899999999987
Q ss_pred C---CcEEEecccHHHHHHHHHhhcCCC--CEEEEeCcccHHHHHHHHhcC------------CeEEEecCCCHHHHHHH
Q psy15447 140 L---EETALYSFGFSTSASAIAAYVKRN--DAVFVDENINFAIQTGLIASR------------CKVQYFKHNNMQHLEEL 202 (457)
Q Consensus 140 ~---~~~i~~~sG~~a~~~ai~a~~~~g--d~v~~~~~~h~~~~~~~~~~g------------~~~~~~~~~d~~~le~~ 202 (457)
. +++++++||++|+..+++....+| ++|..+..+|+....++.+.+ .++..++++|++++++.
T Consensus 100 ~~~~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 179 (398)
T PRK03244 100 APEGGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAA 179 (398)
T ss_pred CCCCCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHh
Confidence 4 477888999999999998765454 677777889988777765554 23456778899999987
Q ss_pred HHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccccCCCCC
Q psy15447 203 LRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYFGVSTE 277 (457)
Q Consensus 203 l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~~~~~~ 277 (457)
+. +++++|++||++|++|.+.| +++|+++|++||++||+||+|+ | +|++|.++ .+++++.|
T Consensus 180 ~~-----------~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g-~gr~g~~~~~~~~~~~p- 245 (398)
T PRK03244 180 VD-----------DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQT-G-IGRTGAWFAHQHDGVTP- 245 (398)
T ss_pred hc-----------CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-C-CcccchHHhhhhhCCCC-
Confidence 73 25689999999999999987 8899999999999999999986 2 56666543 35677766
Q ss_pred CccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Q psy15447 278 EVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSL 355 (457)
Q Consensus 278 ~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~ 355 (457)
|++ ||||++|+ +.|++++++++++.+....+..+| +.+|+.++++.++|+.+++. ++.+++++++++|++.
T Consensus 246 --Di~--t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~--~~~~~~~aaa~a~l~~~~~~-~~~~~~~~~~~~l~~~ 318 (398)
T PRK03244 246 --DVV--TLAKGLGGGLPIGACLAFGPAADLLTPGLHGSTF--GGNPVACAAALAVLDTIASE-GLLENAERLGEQLRAG 318 (398)
T ss_pred --CEE--EEchhhhCCcccEEEEEcHHHHhhccCCCCcCCC--CCCHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHH
Confidence 665 89999973 348888888888887644344444 46999999999999988654 5789999999999999
Q ss_pred hhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447 356 LSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQ 435 (457)
Q Consensus 356 L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e 435 (457)
|+++. .+.+.. .+..+.++++.++.+ ...++.+.|+++||++.+.. .+.+|++|+..+|++
T Consensus 319 L~~~~-~~~~~~-v~g~g~~~~i~~~~~--------~~~~~~~~l~~~Gv~~~~~~---------~~~iR~~p~~~~t~~ 379 (398)
T PRK03244 319 IEALG-HPLVDH-VRGRGLLLGIVLTAP--------VAKAVEAAAREAGFLVNAVA---------PDVIRLAPPLIITDA 379 (398)
T ss_pred HHhcC-CCceee-EeeccEEEEEEEecc--------HHHHHHHHHHHCCeEEeecC---------CCEEEEECCCcCCHH
Confidence 98832 111111 134678888888543 45679999999999997643 378999999999999
Q ss_pred HHHHHHHHHHHHHHHhc
Q psy15447 436 DMNSLIETLCKSHDIAV 452 (457)
Q Consensus 436 di~~~~~~l~~~~~~~~ 452 (457)
||++++++|+++++++.
T Consensus 380 ~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 380 QVDAFVAALPAILDAAA 396 (398)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999998764
No 61
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=8e-40 Score=327.08 Aligned_cols=359 Identities=15% Similarity=0.159 Sum_probs=262.9
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+|+| .|||+||||.++ ..+|+. ||+|.+|+++|+++..+... .+...++...+|+++|++.+
T Consensus 32 ~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~q~~~~~~~~~---~~~~~~~~~~~lae~L~~~~ 107 (456)
T PRK07480 32 GSRVITRAEGVYLWDSEGNKILDGMAGLWCVNVGYG-RKELADAAARQMRELPYYNT---FFKTTHPPAIELAAKLAEVA 107 (456)
T ss_pred CCceEEeceeeEEEeCCCCEEEEccchHHHhcCCCC-CHHHHHHHHHHHHhcCCccc---ccccCCHHHHHHHHHHHHhC
Confidence 46889999999999 599999999875 345554 89999999999998654221 11236789999999999988
Q ss_pred C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCC-
Q psy15447 139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHN- 194 (457)
Q Consensus 139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~- 194 (457)
+ .++++|++||++|++.|++... ++..+|.....||+.+..++++++.. +..++++
T Consensus 108 p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~ 187 (456)
T PRK07480 108 PPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPY 187 (456)
T ss_pred CCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCc
Confidence 5 4688999999999999998642 23346777888999988777765422 1112211
Q ss_pred --------C--------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q psy15447 195 --------N--------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDE 254 (457)
Q Consensus 195 --------d--------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DE 254 (457)
+ .+++++.+.+.. ++++++||+||+++.+|.+.| +++|+++|++||++||+||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DE 260 (456)
T PRK07480 188 WFGEGGDMTPEEFGLAAARQLEAKILELG-------ADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADE 260 (456)
T ss_pred ccccccCCChHHHHHHHHHHHHHHHHhcC-------CCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1 244444443221 257899999999999898876 8999999999999999999
Q ss_pred Ccc-cccccCCCCc-cccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHh--hCCcceecCCCcHHHHHH
Q psy15447 255 SVS-FGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRL--SGSGYCFSASLPPFLAVA 327 (457)
Q Consensus 255 a~~-~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~aa 327 (457)
+++ +|+ +|.+ ..+++|+.| ||+ +++|++|+ +.|.+++++++++.+.. ....+.++.+.+|++||+
T Consensus 261 V~tGfGR---tG~~~a~~~~gv~P---Div--~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aa 332 (456)
T PRK07480 261 VICGFGR---TGEWFGSQHFGIKP---DLM--TIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAV 332 (456)
T ss_pred hhhCCCc---CcchhhhhhcCCCC---Cee--eeehhhccCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHH
Confidence 984 544 4554 457899988 676 89999963 35777888888887732 111122333459999999
Q ss_pred HHHHHHHHhhCcHHHHHH-HHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch--H--HHHHHHHHHHHHHHH
Q psy15447 328 ANKALHLLKANPSLLTKL-REKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE--V--ASKKLLQTICDMCIQ 402 (457)
Q Consensus 328 a~a~l~~~~~~~~~~~~l-~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~--~~~~~~~~~~~~l~~ 402 (457)
++++|+++++. ++.+++ ++++++|++.|+++... ++.......+.++.+.+..+... . ........+.+.|++
T Consensus 333 a~a~L~~l~~~-~l~~~~~~~~g~~l~~~l~~l~~~-~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (456)
T PRK07480 333 ALANLRILRDE-GIVERVRDDTGPYLQKRLRELADH-PLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFA 410 (456)
T ss_pred HHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHhhcC-CCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHH
Confidence 99999999765 488899 58999999999874322 21111235678888888543210 0 001123567888999
Q ss_pred cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 403 AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 403 ~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+|+++.+. .+.+||+|++.+|++|||+++++++++++++.
T Consensus 411 ~Gll~~~~----------~~~l~~~Ppl~it~~eid~~~~~l~~al~~~~ 450 (456)
T PRK07480 411 NGLIMRAV----------GDRMIISPPLVITHAEIDELVEKARKALDATA 450 (456)
T ss_pred CCcEEeec----------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99998642 26899999999999999999999999998764
No 62
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=100.00 E-value=1.3e-39 Score=318.85 Aligned_cols=348 Identities=33% Similarity=0.552 Sum_probs=282.5
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHh
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA 159 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a 159 (457)
++|++|+|++|||..+||+|.+++.+++++++....+++...|..+...++++.+++++|.+..+++++|++++..++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~~~~ 80 (349)
T cd06454 1 KKVLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEAALVFSSGYAANDGVLST 80 (349)
T ss_pred CCceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCCCEEEeccHHHHHHHHHHH
Confidence 57999999999999999999999999999887655555566678899999999999999998889999999999999999
Q ss_pred hcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHH
Q psy15447 160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDI 239 (457)
Q Consensus 160 ~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i 239 (457)
++++||.|+++.++|.+...+++..|.++..++..|++++++.+++... +.++++++++++++++|.+.|+++|
T Consensus 81 ~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~------~~~~~~v~~~~~~~~tG~~~~~~~i 154 (349)
T cd06454 81 LAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKHNDMEDLEKLLREARR------PYGKKLIVTEGVYSMDGDIAPLPEL 154 (349)
T ss_pred hcCCCCEEEEehhhhHHHHHHHHHcCCceEEecCCCHHHHHHHHHHhhc------cCCCeEEEEeccccCCCCccCHHHH
Confidence 9999999999999999999888999999988888899999999876320 1356789999999999999999999
Q ss_pred HHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcceecCC
Q psy15447 240 LSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSAS 319 (457)
Q Consensus 240 ~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~~~~~ 319 (457)
.++|++||+++|+||+|++|.++..+.+. ..+.....+.|++++|++|++|+.||++++++++++.++.....+.++++
T Consensus 155 ~~~~~~~~~~livD~a~~~g~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~gG~i~~~~~~~~~~~~~~~~~~~~~~ 233 (349)
T cd06454 155 VDLAKKYGAILFVDEAHSVGVYGPHGRGV-EEFGGLTDDVDIIMGTLGKAFGAVGGYIAGSKELIDYLRSYARGFIFSTS 233 (349)
T ss_pred HHHHHHcCCEEEEEccccccccCCCCCCh-hhhccccccCcEEEeechhhhcccCCEEECCHHHHHHHHHhchhhhccCC
Confidence 99999999999999999887776544332 12333345678999999999998899999999988887665545555556
Q ss_pred CcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHH
Q psy15447 320 LPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDM 399 (457)
Q Consensus 320 ~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 399 (457)
.++..++++.++++.+.+.+..+++++++.+++.+.|++ .++++..++.+.+.++.+.++. ...++.+.
T Consensus 234 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 302 (349)
T cd06454 234 LPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKE----LGFPVGGSPSHIIPPLIGDDPA-------KAVAFSDA 302 (349)
T ss_pred CCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh----cCCcccCCCCCcEEEEeCCChH-------HHHHHHHH
Confidence 788888888899988765456788999999999999988 4666554434444444333222 45689999
Q ss_pred HHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 400 CIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 400 l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
|.++||.+.+..++.. ....+++|++++..+|++|+++++++|+++
T Consensus 303 L~~~gI~~~~~~~~~~--~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 303 LLERGIYVQAIRYPTV--PRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred HHhCCceEEEecCCcc--CCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 9999999987544211 122479999999989999999999999864
No 63
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=3.9e-40 Score=326.49 Aligned_cols=383 Identities=15% Similarity=0.149 Sum_probs=286.3
Q ss_pred ChhhHHHHHcccCCCCCCCcccccc-ccCCceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHh
Q psy15447 35 HTINVDALINNWTPEPIVSKAEKFK-DVSSKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDK 109 (457)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~ 109 (457)
++.+..+.+.++.|.+..++..... +...|+++++++|++|| .|||+||||.++ ..+|++ ||+|.+|+.+|+++
T Consensus 6 ~s~~l~~~a~~~~p~g~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yiD~~~g~~~~~lGh~-~p~v~~ai~~q~~~ 84 (433)
T PRK00615 6 EMTHTFSEACQYFPGGVNSPVRACRSVGITPPIVSSASGDIFIDSLGKTFIDFCGSWGSLIHGHS-HPKICDAIQQGAER 84 (433)
T ss_pred HHHHHHHHHHhhCCCCcCCCcccccccCCCCceEEEeeeCEEEECCCCEEEEcccchhccccCCC-CHHHHHHHHHHHHh
Confidence 3667788889999999877655432 22468899999999999 599999999775 234554 89999999999987
Q ss_pred cCCCCCCCCCcccChHHHHHHHHHHHhhcCC--CcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHH---HHHH
Q psy15447 110 NGVGSCGPRGFYGTNVVHLDLENDIASFMGL--EETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAI---QTGL 181 (457)
Q Consensus 110 ~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~---~~~~ 181 (457)
.. .. ...++...+|.++|.+.++. ++++|++||++|++.|++.. +++..+|.....+|+.+ ..++
T Consensus 85 ~~-~~------~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~ 157 (433)
T PRK00615 85 GT-SY------GLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGI 157 (433)
T ss_pred CC-CC------CCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCccc
Confidence 32 11 12567889999999998864 58899999999999999854 45666778888999965 4443
Q ss_pred HhcC----------------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHH
Q psy15447 182 IASR----------------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILS 241 (457)
Q Consensus 182 ~~~g----------------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~ 241 (457)
..++ .....++++|++++++.+++.. +++++||+||++++.|.+.| +++|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--------~~~aavI~Epv~~~~G~~~p~~~yl~~l~~ 229 (433)
T PRK00615 158 SFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLG--------HRVAGVIFEPICANMGVVLPKPGFIEGIIQ 229 (433)
T ss_pred ccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcC--------CceEEEEECCCCCCCCcccCCHHHHHHHHH
Confidence 3322 1224567889999999997543 46789999999999999887 569999
Q ss_pred HHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcc-eecC
Q psy15447 242 LRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGY-CFSA 318 (457)
Q Consensus 242 l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~-~~~~ 318 (457)
+|++||++||+||++...++|. .+..+++|+.| ||+ +++|++|+ ++|++++++++++.+......+ ..+.
T Consensus 230 lc~~~g~llI~DEv~tG~R~G~--~ga~~~~gv~P---Di~--~~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~T~ 302 (433)
T PRK00615 230 TCRRTGSLSIMDEVVTGFRVAQ--GGAAAIYHVKP---DIT--VYGKILGGGLPAAAVVAHKSIMDHLAPEGTIFQAGTL 302 (433)
T ss_pred HHHHcCCEEEEEcccccccccH--hHHHHhcCCCC---CeE--EEcccccCCcceeeeeecHHHHhhhcCCCCcccCCCC
Confidence 9999999999999984214442 45668899987 676 69999963 5789999999999885432212 1233
Q ss_pred CCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch---H---HHHHH
Q psy15447 319 SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE---V---ASKKL 392 (457)
Q Consensus 319 ~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~---~~~~~ 392 (457)
+.+|+.|++++++|+++++++ ++++++++.++|++.|+++....++++.....+.++.+.+..+... + .+...
T Consensus 303 ~g~p~~~aa~la~L~~i~~~~-~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~ 381 (433)
T PRK00615 303 SGNPLAMAAGKASINLCREQG-FYTQLSTLEQNFLSPIEEMIRSQGFPVSLVRYGSMFSFFFNENRPNNLAEAQLSDIEA 381 (433)
T ss_pred cccHHHHHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeeceEEEEEEeCCCCCChHHHhhCCHHH
Confidence 469999999999999997654 7999999999998888763222333322122577788877643211 0 12234
Q ss_pred HHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 393 LQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 393 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
...+.+.|.++||++.+..++. ..++..||++|||+++++++++++.+-
T Consensus 382 ~~~~~~~l~~~Gv~~~~~~~~~-----------~~ls~~ht~~did~~~~a~~~~~~~~~ 430 (433)
T PRK00615 382 FQTFYQSAFSKGVYLSPSPFEA-----------SFLSSAHSMENLDYAQNVLIDSLEKVF 430 (433)
T ss_pred HHHHHHHHHHCCeeecCccccc-----------cceecCCCHHHHHHHHHHHHHHHHHHh
Confidence 5689999999999998765421 256788999999999999999988764
No 64
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.2e-39 Score=326.10 Aligned_cols=359 Identities=13% Similarity=0.091 Sum_probs=264.9
Q ss_pred ceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447 64 KYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG 139 (457)
Q Consensus 64 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g 139 (457)
|+.+++++|+||| .|||+||||.++ ..+|+. ||+|.+|+.+|++++.+.... ...++...+|+++|++.++
T Consensus 47 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~i~~Ai~~q~~~l~~~~~~----~~~~~~~~~lae~L~~~~p 121 (472)
T PRK08742 47 LVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHA-EPRIGAAIAAQAGELEQVMLA----GFTHEPAVQLAEQLLAIAP 121 (472)
T ss_pred CeeEEecccCEEEeCCCCEEEEcCccHHhccCCCC-CHHHHHHHHHHHHhCCCcccc----ccCCHHHHHHHHHHHHhCC
Confidence 4578999999999 599999999875 345664 899999999999986543221 1246788999999999875
Q ss_pred -------CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEe
Q psy15447 140 -------LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYF 191 (457)
Q Consensus 140 -------~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~ 191 (457)
.++++|.+||++|++.|++... ++..+|.....||+.+..++.+++.. +..+
T Consensus 122 ~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~ 201 (472)
T PRK08742 122 RQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFA 201 (472)
T ss_pred CcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEe
Confidence 3578999999999999998652 24567888999999998887776532 1222
Q ss_pred cCCC-----------------HHHHHHHHHhhchhcccCCCCccEEEEEec-CCCCCCCCCC----hHHHHHHHHHcCcE
Q psy15447 192 KHNN-----------------MQHLEELLRQQDERDTLNSKVTKKFIIVEG-VYMNSADICP----LKDILSLRSKYQAR 249 (457)
Q Consensus 192 ~~~d-----------------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~-v~~~~G~i~~----l~~i~~l~~~~g~~ 249 (457)
+.++ ++.+++.+... ++++++||+|| +++.+|.+.| +++++++|++||++
T Consensus 202 ~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gil 273 (472)
T PRK08742 202 PSPDAYLAEPGQSAEDYALQAADALQALFEQS--------PGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAF 273 (472)
T ss_pred CCCCccccccCCCHHHHHHHHHHHHHHHHHhC--------CCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 2221 34555665432 25789999999 6888887665 89999999999999
Q ss_pred EEEEcCcc-cccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhC----CcceecCCCc
Q psy15447 250 IFVDESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSG----SGYCFSASLP 321 (457)
Q Consensus 250 li~DEa~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~----~~~~~~~~~~ 321 (457)
||+||+++ +|++|. .+..+++|+.| ||+ +++|++|+ +-|++++++++++.+.... ..+..+.+.+
T Consensus 274 lI~DEV~TGfGRtG~--~~a~e~~gv~P---Div--~~gKgl~gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gn 346 (472)
T PRK08742 274 LIADEIATGFGRTGT--LFACEQAGVMP---DLL--CLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGN 346 (472)
T ss_pred EEEechhhCCCCCcc--chHHHhcCCCC---CEE--EEcccccCCCCCcceeeccHHHHHHhhccCccCccCcCCCCCcc
Confidence 99999974 655543 33468899988 787 79999952 3577888999888764211 0122233459
Q ss_pred HHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHH
Q psy15447 322 PFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTIC 397 (457)
Q Consensus 322 ~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~ 397 (457)
|++|++++++|++++++ ++.++.++++++|++.++.+...+.+.- .+..+.++.+.+..+... .........+.
T Consensus 347 pl~~Aaa~a~L~~i~~~-~l~~~~~~~g~~l~~~~~~~~~~~~i~d-vRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~ 424 (472)
T PRK08742 347 PLACAAALATLDIFADD-DVIARNQPTAARMTQLAAQIGEHPHVAD-VRQAGMVVAFELTRGGNKRTPFPPAARVGLHAY 424 (472)
T ss_pred HHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHhcCCCeee-EeccceEEEEEeccCccccccCCchhHHHHHHH
Confidence 99999999999999876 4789999999999877766332222211 245688888888543211 01111346788
Q ss_pred HHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447 398 DMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQP 454 (457)
Q Consensus 398 ~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~ 454 (457)
+.|+++|+++.+. .+.+||.||+.+|++|||+++++|+++++++..+
T Consensus 425 ~~~~~~Gll~~~~----------g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~~~~ 471 (472)
T PRK08742 425 RAALARGVVLRPL----------GDVLYWMPPYCVDEAQLALLADTTRHAIDEAVAC 471 (472)
T ss_pred HHHHHCCeEEEec----------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 8999999998653 2789999999999999999999999999887654
No 65
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=6.1e-40 Score=326.27 Aligned_cols=348 Identities=15% Similarity=0.174 Sum_probs=271.3
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|.++++++|+++| .||++||||+++ +++|+ +||+|.+++.++++++.... . ..+++.+.+++++|+++.
T Consensus 22 ~~~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~----~-~~~~~~~~~l~~~l~~~~ 95 (403)
T PRK05093 22 AEFIPVRGEGSRVWDQQGKEYIDFAGGIAVTALGH-CHPALVKALKEQGEKLWHIS----N-VFTNEPALRLAKKLIDAT 95 (403)
T ss_pred CCeeEEEeecCEEEeCCCCEEEEcCcCHHhccCCC-CCHHHHHHHHHHHHhcCccc----C-ccCCHHHHHHHHHHHhhC
Confidence 46789999999999 599999999885 78898 69999999999998854221 1 124677889999999998
Q ss_pred CCCcEEEecccHHHHHHHHHhh---------cCCCCEEEEeCcccHHHHHHHHhcC------------CeEEEecCCCHH
Q psy15447 139 GLEETALYSFGFSTSASAIAAY---------VKRNDAVFVDENINFAIQTGLIASR------------CKVQYFKHNNMQ 197 (457)
Q Consensus 139 g~~~~i~~~sG~~a~~~ai~a~---------~~~gd~v~~~~~~h~~~~~~~~~~g------------~~~~~~~~~d~~ 197 (457)
+.+++++++||++|++.|++.. .++.++|..+..+|+++..++++.+ .++..++++|++
T Consensus 96 ~~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 175 (403)
T PRK05093 96 FAERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDLA 175 (403)
T ss_pred CCCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCCCHH
Confidence 8889999999999999999865 2456788889999999876655432 345678899999
Q ss_pred HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-cccc
Q psy15447 198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYF 272 (457)
Q Consensus 198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~ 272 (457)
++++.+. +++++|++||+++++|.+.| +++|+++|++||+++|+||+|+ | +|++|.+. .+++
T Consensus 176 ~l~~~l~-----------~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g-~g~~g~~~~~~~~ 242 (403)
T PRK05093 176 AVKAVID-----------DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT-G-MGRTGDLFAYMHY 242 (403)
T ss_pred HHHHHhc-----------CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCCCccchhhhhc
Confidence 9998874 25689999999988887754 8999999999999999999987 3 45556543 3567
Q ss_pred CCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Q psy15447 273 GVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCN 350 (457)
Q Consensus 273 ~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~ 350 (457)
++.| |+. ||||++++ +.|++++++++++.+.......++ +.+|+.++++.++|+.+.+ +++.++++++.+
T Consensus 243 ~~~p---di~--s~sK~l~~G~rig~vv~~~~i~~~l~~~~~~~t~--~~~~~~~~aa~a~L~~~~~-~~~~~~~~~~~~ 314 (403)
T PRK05093 243 GVTP---DIL--TSAKALGGGFPIGAMLTTAEIASHFKVGTHGSTY--GGNPLACAVAEAVFDIINT-PEVLEGVKARRQ 314 (403)
T ss_pred CCCC---CEE--EecccccCCcceEEEEEcHHHHhhcCCCCCCCCC--CCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHH
Confidence 7766 554 89999963 358899999998887643333333 4589999999999988854 457899999999
Q ss_pred HHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecC
Q psy15447 351 TMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNI 430 (457)
Q Consensus 351 ~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~ 430 (457)
++.+.|+++....++....+..+.++++.+..... ....++++.|+++||++.+.+ .+++|++|+.
T Consensus 315 ~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~-----~~~~~~~~~l~~~Gv~v~~~g---------~~~lRl~~~~ 380 (403)
T PRK05093 315 RFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYK-----GRARDFLNAAAEEGVMVLVAG---------PDVLRFAPSL 380 (403)
T ss_pred HHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcch-----hHHHHHHHHHHHCCeEEecCC---------CCEEEEeCCC
Confidence 99999987321112212223457778887754210 135679999999999987532 4789999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHh
Q psy15447 431 SHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 431 ~~t~edi~~~~~~l~~~~~~~ 451 (457)
.+|++++++++++|+++++.+
T Consensus 381 ~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 381 VIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred CCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988764
No 66
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=8.7e-40 Score=324.01 Aligned_cols=353 Identities=13% Similarity=0.101 Sum_probs=262.0
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+|+|+ ||++||||.++ ..+|++ ||+|.+|+.+|++++.+.... ..+++...+|+++|++..
T Consensus 22 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~i~~ai~~q~~~~~~~~~~----~~~~~~~~~lae~L~~~~ 96 (422)
T PRK05630 22 RNRLVTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHG-HPRLKAAAHKQIDTMSHVMFG----GLTHEPAIKLTRKLLNLT 96 (422)
T ss_pred CCeeEEeceeeEEEECCCCEEEEcchhHHHhcCCCC-CHHHHHHHHHHHHhCCCcccC----CcCCHHHHHHHHHHHhhC
Confidence 578999999999995 99999999774 345554 899999999999986532211 125788899999999987
Q ss_pred C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe-------------EEEecCC
Q psy15447 139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK-------------VQYFKHN 194 (457)
Q Consensus 139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~-------------~~~~~~~ 194 (457)
+ .++++|++||++|++.|++... ++..+|.....+|+.+..++.+++.. ...++.+
T Consensus 97 p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~ 176 (422)
T PRK05630 97 DNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAP 176 (422)
T ss_pred CCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCC
Confidence 5 5688999999999999998643 23457788899999988877765421 1122211
Q ss_pred -----CHHHHHHHHHhhchhcccCCCCccEEEEEecC-CCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCC
Q psy15447 195 -----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV-YMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGST 264 (457)
Q Consensus 195 -----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v-~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~ 264 (457)
+.++++..++...... .+++++|++||+ ++.+|.+.| +++|+++|++||++||+||++. | +|++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~----~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~t-G-~Grt 250 (422)
T PRK05630 177 PVRGSSPQEISEYLRSLELLI----DETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIAT-G-FGRT 250 (422)
T ss_pred cccCCChHHHHHHHHHHHHHH----hhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccee-C-CCcC
Confidence 1222222222111000 136889999996 888887655 8999999999999999999984 3 3666
Q ss_pred CCcc-ccccCCCCCCccEEEecCccccc---CcccEEEecHHHHHHHHhhC--C--cceecCCCcHHHHHHHHHHHHHHh
Q psy15447 265 GHGV-TEYFGVSTEEVDMIIGSLEHALG---SVGGFCVGSSYIIEHHRLSG--S--GYCFSASLPPFLAVAANKALHLLK 336 (457)
Q Consensus 265 g~~~-~~~~~~~~~~~Di~~~s~sK~lg---~~gG~v~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~aaa~a~l~~~~ 336 (457)
|.++ .+++|+.| ||+ +++|++| .++|++++++++++.+.... . .+..+.+.+|+.|++++++|++++
T Consensus 251 G~~~a~~~~gv~P---Di~--t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~ 325 (422)
T PRK05630 251 GELFATLAAGVTP---DIM--CVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIE 325 (422)
T ss_pred chhhHHHhcCCCC---Cee--eeechhhcCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHH
Confidence 6664 47889988 787 8999994 25788999999998875320 0 112233469999999999999998
Q ss_pred hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccc
Q psy15447 337 ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQE 416 (457)
Q Consensus 337 ~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~ 416 (457)
++ .+.++++++.++|++.|+++...+.+.-+ +..+.++.+.+.++. .+..+.+.|+++|+++.+.
T Consensus 326 ~~-~~~~~~~~~g~~l~~~L~~l~~~~~v~~v-Rg~Gl~~~ie~~~~~-------~~~~~~~~~~~~Gl~~~~~------ 390 (422)
T PRK05630 326 TG-MWRKQVKRIEAELIAGLSPLAHLPGVADV-RVLGAIGVVEMEQPV-------DMEEATQAAVDHGVWLRPF------ 390 (422)
T ss_pred hC-cHHHHHHHHHHHHHHHHHHhhcCCCeeee-eccccEEEEEECCcc-------cHHHHHHHHHHCCeEEEec------
Confidence 76 47789999999999988764322333222 456889999887543 3457889999999998653
Q ss_pred cCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 417 AKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 417 ~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
.+.+||.|++.+|++|+|+++++|+++++.
T Consensus 391 ----g~~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 391 ----GRLVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred ----CCEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 268999999999999999999999998854
No 67
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1e-39 Score=326.02 Aligned_cols=361 Identities=15% Similarity=0.161 Sum_probs=268.6
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+|||+ ||++||||.++ ..+|+. ||+|.+|+.+|+++..+... .+.+++...+|+++|++..
T Consensus 35 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~i~~Ai~~ql~~~~~~~~----~~~~~~~~~~lae~L~~~~ 109 (457)
T PRK05639 35 FPLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGYS-HPKLVKAVQEQVALIQHSMI----GYTHSERAIRVAEKLAEIS 109 (457)
T ss_pred CCceEEeeecCEEEeCCCCEEEECCcCHHhhccCCC-CHHHHHHHHHHHHhcccccc----CccCCHHHHHHHHHHHhhC
Confidence 378899999999995 99999999875 345654 89999999999998543221 1224678889999999987
Q ss_pred CC--CcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC-------------eEEEecCCC-----
Q psy15447 139 GL--EETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC-------------KVQYFKHNN----- 195 (457)
Q Consensus 139 g~--~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~-------------~~~~~~~~d----- 195 (457)
+. ++++|++||++|++.|++.. +++.++|.....+|+.+..++.+++. .+.++++++
T Consensus 110 p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 189 (457)
T PRK05639 110 PIENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNP 189 (457)
T ss_pred CCCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCcccccc
Confidence 63 57899999999999999864 46667788899999998877766541 133344332
Q ss_pred --------HHH--------HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcC
Q psy15447 196 --------MQH--------LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDES 255 (457)
Q Consensus 196 --------~~~--------le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa 255 (457)
.++ +++.+.... ..++++++||+||+++.+|.+.| +++|+++|++||++||+||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~le~~l~~~~-----~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv 264 (457)
T PRK05639 190 WGINGYEEPDELINRFLDYLENYVFSHV-----VPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEV 264 (457)
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHhh-----cCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEech
Confidence 222 233322110 01367899999999999898766 89999999999999999999
Q ss_pred cccccccCCCCc-cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHH
Q psy15447 256 VSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKAL 332 (457)
Q Consensus 256 ~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l 332 (457)
++ | +|++|.+ ..+++|+.| ||+ +++|++|. +.|++++++++++. ... .+.++.+.+|+.|++++++|
T Consensus 265 ~t-G-~GrtG~~~a~~~~gv~P---Div--~~gK~l~gG~pi~av~~~~~i~~~-~~~--~~~~T~~g~p~~~aaa~a~l 334 (457)
T PRK05639 265 QT-G-IGRTGKWFASEWFEVKP---DLI--IFGKGVASGMGLSGVIGRKELMDL-TSG--SALLTPAANPVISAAAEATL 334 (457)
T ss_pred hh-c-cCcCchHHHHHhcCCCC---CEE--EechhhcCCCcceeEEehHHHHhh-cCC--CcccCCCcCHHHHHHHHHHH
Confidence 86 4 6777776 457899987 787 69999963 34788999998883 222 23355567999999999999
Q ss_pred HHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc
Q psy15447 333 HLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH 412 (457)
Q Consensus 333 ~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~ 412 (457)
+.++++ ++.++.++++++|++.|+++....++....+..+.++.+.+..+... .+......+.+.|+++|+++.+..
T Consensus 335 ~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~-~~~~~~~~~~~~~~~~Gv~~~~~g- 411 (457)
T PRK05639 335 EIIEEE-NLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGK-PDPELTGKICWRAFELGLILPSYG- 411 (457)
T ss_pred HHHHHc-cHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCC-CCHHHHHHHHHHHHhCCeEEeecC-
Confidence 999765 47889999999999999874321222222245677888877543211 111245678999999999987542
Q ss_pred CccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 413 LDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 413 ~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
...+.+||.|++.+|++|+|+++++++++++.+.
T Consensus 412 ------~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 412 ------MFGNVIRITPPLVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred ------CCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 1247999999999999999999999999988764
No 68
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=4.3e-40 Score=326.31 Aligned_cols=343 Identities=15% Similarity=0.160 Sum_probs=264.4
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeec---CCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFAT---HNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s---~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|..+++++|+++| .||++||||.+ ++++|+ +||+|.+|+.+|+++...... . ..++.+.+++++|+++.
T Consensus 13 ~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~---~--~~~~~~~~la~~l~~~~ 86 (389)
T PRK01278 13 ADLAFERGEGVWLIDEDGERYLDFASGIAVNSLGH-AHPHLVEALKEQAEKLWHVSN---L--YRIPEQERLAERLVENS 86 (389)
T ss_pred CCceEEeeecCEEEECCCCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhcCcccc---c--cCChHHHHHHHHHHhhC
Confidence 47889999999999 59999999987 467888 599999999999987433211 1 25788899999999998
Q ss_pred CCCcEEEecccHHHHHHHHHhh---------cCCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCCCHH
Q psy15447 139 GLEETALYSFGFSTSASAIAAY---------VKRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHNNMQ 197 (457)
Q Consensus 139 g~~~~i~~~sG~~a~~~ai~a~---------~~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~d~~ 197 (457)
+.+++++++||++|++.++++. .++.++|..+..+|+.+..+...++.. +..++++|++
T Consensus 87 ~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 166 (389)
T PRK01278 87 FADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIE 166 (389)
T ss_pred CCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHH
Confidence 8889999999999999999876 223357777888998887776665432 2245678999
Q ss_pred HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC-C---hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-cccc
Q psy15447 198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC-P---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYF 272 (457)
Q Consensus 198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~-~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~ 272 (457)
++++.++ +++++|++||+++++|... | +++|+++|++||++||+||+|+ | +|++|.++ .+++
T Consensus 167 ~l~~~l~-----------~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g-~g~~g~~~~~~~~ 233 (389)
T PRK01278 167 ALKAAIT-----------PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC-G-MGRTGKLFAHEWA 233 (389)
T ss_pred HHHHhhC-----------CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCcCCcceeeccc
Confidence 9998884 2568999999999988544 3 8999999999999999999997 2 45555543 3567
Q ss_pred CCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Q psy15447 273 GVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCN 350 (457)
Q Consensus 273 ~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~ 350 (457)
++.| |++ |+||++++ +.|++++++++++.+....+..+| +.+|+.+++++++++.+++. +..++++++.+
T Consensus 234 ~~~p---di~--t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~--~~~~~~~aaa~a~l~~l~~~-~~~~~~~~~~~ 305 (389)
T PRK01278 234 GVTP---DIM--AVAKGIGGGFPLGACLATEEAAKGMTPGTHGSTY--GGNPLAMAVGNAVLDVILAP-GFLDNVQRMGL 305 (389)
T ss_pred CCCC---CEE--EEehhccCCcceEEEEEcHHHHhccCCCCCCCCC--CccHHHHHHHHHHHHHHhhh-HHHHHHHHHHH
Confidence 7766 554 89999963 458899999888877654444444 45899999999999988643 47788889999
Q ss_pred HHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEec
Q psy15447 351 TMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCN 429 (457)
Q Consensus 351 ~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~ 429 (457)
++++.|+++.. .+++.....+.+.++++.+.. ...+++++|+++||++.+.. .+++||+|+
T Consensus 306 ~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~---------~~~~~~~~l~~~GV~~~p~~---------~~~lR~~p~ 367 (389)
T PRK01278 306 YLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVV---------PNRDLVQALRDEGLLTVGAG---------DNVVRLLPP 367 (389)
T ss_pred HHHHHHHHHHhhCCCceeeEecccEEEEEEEec---------CHHHHHHHHHHCCeEEeecC---------CCEEEEeCC
Confidence 99888876321 121211113456677776643 24579999999999987653 478999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q psy15447 430 ISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 430 ~~~t~edi~~~~~~l~~~~~~ 450 (457)
+.+|++++++++++|+++++.
T Consensus 368 ~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 368 LIITEEEIDEALERLERAAES 388 (389)
T ss_pred cccCHHHHHHHHHHHHHHHHh
Confidence 999999999999999998764
No 69
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=2.7e-39 Score=324.10 Aligned_cols=360 Identities=16% Similarity=0.144 Sum_probs=264.7
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+|+| .|||+||||.++ ..+|++ ||+|.+|+.+|+.+..+... .....++...+|+++|++..
T Consensus 33 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~q~~~~~~~~~---~~~~~~~~~~~lae~L~~~~ 108 (466)
T PRK07036 33 GSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGYG-REEMADAIADQARRLPYYTP---FGDMTNAPAAELAAKLAELA 108 (466)
T ss_pred CCceEEeCceeEEEECCCCEEEECcccHHhhcCCCC-CHHHHHHHHHHHHhCccccc---ccccCCHHHHHHHHHHHHhC
Confidence 47899999999999 599999999765 345664 89999999999998543221 11125788899999999987
Q ss_pred C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCCC
Q psy15447 139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHNN 195 (457)
Q Consensus 139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~d 195 (457)
+ .+.++|++||++|++.|++... ++..+|.....||+.+..++.+++.. +..++.++
T Consensus 109 p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~ 188 (466)
T PRK07036 109 PGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPN 188 (466)
T ss_pred CCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCc
Confidence 5 4678899999999999998642 24457778889999988777665522 12222111
Q ss_pred -----------------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q psy15447 196 -----------------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDE 254 (457)
Q Consensus 196 -----------------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DE 254 (457)
.+.+++.+.... ++.+++|++||+++.+|.+.| +++|+++|++||+++|+||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-------~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DE 261 (466)
T PRK07036 189 PYRRPAGMSEAAFCDFLVDEFEDKILSLG-------ADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDE 261 (466)
T ss_pred ccccccCCChHHHHHHHHHHHHHHHHHcC-------CCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEee
Confidence 123444443211 367899999999999999877 8999999999999999999
Q ss_pred Cc-ccccccCCCCcccc-ccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhh---C--CcceecCCCcHHH
Q psy15447 255 SV-SFGTLGSTGHGVTE-YFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLS---G--SGYCFSASLPPFL 324 (457)
Q Consensus 255 a~-~~g~~g~~g~~~~~-~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~---~--~~~~~~~~~~~~~ 324 (457)
++ ++|++|. .+..+ ++|+.| ||+ +++|++|+ +.|++++++++++.+... . ..+.++.+.+|++
T Consensus 262 V~tGfGRtG~--~~~~~~~~gv~P---Div--t~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~ 334 (466)
T PRK07036 262 VVTGFGRLGH--FFASEAVFGIQP---DII--TFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVA 334 (466)
T ss_pred chhCCCcCch--hhhhhhhcCCCC---CEE--EEccccccCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHH
Confidence 97 4555542 23344 789988 777 89999963 357788999999887532 1 0112233469999
Q ss_pred HHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHHH
Q psy15447 325 AVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDMC 400 (457)
Q Consensus 325 ~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l 400 (457)
|++++++|+++++. ++.+++++++++|++.|+++...+-+ ......+.++.+.+..+... ..+......+.+.|
T Consensus 335 ~aaa~a~Le~i~~~-~l~~~~~~~g~~l~~~L~~l~~~~~v-~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (466)
T PRK07036 335 CAAALKNIEIMERE-GLCEHVREVGPYFEERLASLRELPLV-GDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHC 412 (466)
T ss_pred HHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHhccCCCE-EEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHH
Confidence 99999999999765 58999999999999999874322211 11245678888887543211 11122456788999
Q ss_pred HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 401 IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 401 ~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+++|+++.+. .+.+|++|++.+|++|||+++++++++++.+.
T Consensus 413 ~~~Gvl~~~~----------~~~~~l~Ppl~it~~~id~~~~~l~~al~~~~ 454 (466)
T PRK07036 413 QERGLLVRPL----------EHLCVLSPPLIITRAQIDEIVAILRAAIEETA 454 (466)
T ss_pred HHCCcEEeec----------CCEEEEeCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 9999998653 25799999999999999999999999987763
No 70
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-39 Score=322.36 Aligned_cols=361 Identities=14% Similarity=0.132 Sum_probs=268.8
Q ss_pred ceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447 64 KYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG 139 (457)
Q Consensus 64 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g 139 (457)
|+++++++|+||| .|||+||||.++ ..+|++ ||+|.+|+.+|+++..+... ....++...+|.++|++.++
T Consensus 23 p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~ql~~l~~~~~----~~~~~~~~~~la~~l~~~~p 97 (425)
T PRK07495 23 QIYADRAENAEIWDKEGRRYIDFAAGIAVVNTGHR-HPRVIAAVKAQLDRFTHTCH----QVVPYENYVRLAERLNALVP 97 (425)
T ss_pred CeeEEeeeecEEEeCCCCEEEEccccHHhhccCCC-CHHHHHHHHHHHhhccCccc----CccCCHHHHHHHHHHHHhCC
Confidence 7889999999999 499999999875 345664 89999999999998643211 12357788999999999876
Q ss_pred C---CcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC-------------eEEEecCCC-----
Q psy15447 140 L---EETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC-------------KVQYFKHNN----- 195 (457)
Q Consensus 140 ~---~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~-------------~~~~~~~~d----- 195 (457)
. ++++|++||++|++.|++.. .++..+|.....+|+.+..++.+++. .+..++.++
T Consensus 98 ~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 177 (425)
T PRK07495 98 GDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGV 177 (425)
T ss_pred CCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccc
Confidence 3 57899999999999999854 45667888899999998877665442 122333332
Q ss_pred -----HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCC
Q psy15447 196 -----MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGH 266 (457)
Q Consensus 196 -----~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~ 266 (457)
.+++++.+++.. .++++++|++||+++++|.+.+ +++|+++|++||+++|+||+++ | +|++|.
T Consensus 178 ~~~~~~~~l~~~~~~~~------~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G-~gr~G~ 249 (425)
T PRK07495 178 SVEQSLAALDKLFKADV------DPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQT-G-FARTGK 249 (425)
T ss_pred cHHHHHHHHHHHHHhcc------CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-c-CCcCCC
Confidence 344566554211 1256899999999999886643 8899999999999999999986 2 456665
Q ss_pred c-cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHH
Q psy15447 267 G-VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLT 343 (457)
Q Consensus 267 ~-~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~ 343 (457)
+ ..+++++.| ||+ ||||++|+ +.|++++++++++.+....+. ++.+.+|+.|++++++++++++. ++.+
T Consensus 250 ~~a~~~~gv~p---Di~--tlsK~l~~G~pigav~~~~~i~~~~~~~~~~--~T~~~~pl~~aaa~a~l~~l~~~-~l~~ 321 (425)
T PRK07495 250 LFAMEHHEVAA---DLT--TMAKGLAGGFPLAAVTGRAEIMDAPGPGGLG--GTYGGNPLGIAAAHAVLDVIEEE-DLCE 321 (425)
T ss_pred ceeecccCCCC---CEE--eehhhhcCCccceEEEEcHHHHhccCCCCcC--CCCCCCHHHHHHHHHHHHHHHhc-hHHH
Confidence 4 356788877 665 89999963 468899999998877543333 34456999999999999999765 5889
Q ss_pred HHHHHHHHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCC
Q psy15447 344 KLREKCNTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKP 422 (457)
Q Consensus 344 ~l~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~ 422 (457)
++++++++|++.|+++.. .+.+. .....+.++++.+.++...+........+.+.|+++|+++...+ ..++
T Consensus 322 ~~~~~g~~l~~~L~~l~~~~~~i~-~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g-------~~~~ 393 (425)
T PRK07495 322 RANQLGNRLKQRLASLRETVPEIA-DIRGPGFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTCG-------VHGN 393 (425)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCee-eeecCceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecC-------CCCC
Confidence 999999999999987432 12221 11345888888886432111112245678899999999986532 1248
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 423 SIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 423 ~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
.+||.||+.+|++|+|+++++|+++++++..
T Consensus 394 ~~r~~Ppl~it~~~id~~~~~l~~~l~~~~~ 424 (425)
T PRK07495 394 VIRFLAPITIQDDVFAEALDILEASILEASA 424 (425)
T ss_pred EEEEeCCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999987653
No 71
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=1.7e-39 Score=323.72 Aligned_cols=359 Identities=14% Similarity=0.167 Sum_probs=266.7
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+||| .|||+||||.++ ..+|+. ||+|.+|+.+|+.+.++.+.. ...++...+|+++|++.+
T Consensus 21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~ql~~~~~~~~~----~~~~~~~~~lae~l~~~~ 95 (425)
T PRK09264 21 FPVVFDKAKGSWLYDEDGKEYIDFFAGAGALNYGHN-NPVLKQALIDYLQRDGITHGL----DMHTTAKREFLETFEETI 95 (425)
T ss_pred CCccEEeeecCEEEeCCCCEeeecccchhhccCCCC-CHHHHHHHHHHHHhccccccc----ccCcHHHHHHHHHHHHhh
Confidence 47889999999999 599999999775 345664 899999999999986543221 124678889999999864
Q ss_pred C----CC-cEEEe-cccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC------------eEEEecC----
Q psy15447 139 G----LE-ETALY-SFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC------------KVQYFKH---- 193 (457)
Q Consensus 139 g----~~-~~i~~-~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~---- 193 (457)
. .+ +++|+ +||++|++.|++.. .++.++|.....+|+.+..++.+++. .+..+++
T Consensus 96 ~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~ 175 (425)
T PRK09264 96 LKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYF 175 (425)
T ss_pred cCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCcc
Confidence 2 33 45565 79999999999864 46667888899999998887776531 2333444
Q ss_pred ----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCC
Q psy15447 194 ----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTG 265 (457)
Q Consensus 194 ----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g 265 (457)
+|++++++.+++... +++.+++|++||+++++|.+.| |++|+++|++||++||+||+|+. +|++|
T Consensus 176 ~~~~~~~~~l~~~l~~~~~-----~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG--~GrtG 248 (425)
T PRK09264 176 GGDVDTLAYLEKLLEDSSS-----GVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAG--CGRTG 248 (425)
T ss_pred ccchhHHHHHHHHHHhccC-----CCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhC--Ccccc
Confidence 467888888865321 1246889999999999887653 89999999999999999999862 56666
Q ss_pred Ccc-ccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHH
Q psy15447 266 HGV-TEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSL 341 (457)
Q Consensus 266 ~~~-~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~ 341 (457)
.++ .+++++.| ||+ |++|++|+.| |++++++++ ..+....+..+| +.+|++|++++++++.+.+.+++
T Consensus 249 ~~~~~~~~~v~P---Di~--t~~K~l~~~G~pigav~~~~~i-~~~~~~~~~~T~--~gnp~~~aaa~a~l~~~~~~~~l 320 (425)
T PRK09264 249 TFFSFERAGITP---DIV--TLSKSISGYGLPMALVLIKPEL-DVWKPGEHNGTF--RGNNLAFVTATAALEEYWSDDAF 320 (425)
T ss_pred HHHHHhhcCCCC---CEE--EeccccCCCccceEEEEEchhh-hccCCCccCCCC--CCCHHHHHHHHHHHHHHHhhhHH
Confidence 653 47788887 665 8899997534 888888876 333322223333 45899999999999433344468
Q ss_pred HHHHHHHHHHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCC
Q psy15447 342 LTKLREKCNTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQ 420 (457)
Q Consensus 342 ~~~l~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~ 420 (457)
.++++++.+++++.|+++.. .+.+....+..+.++++.+.+.. ....+++.|.++||++.+... .
T Consensus 321 ~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~~~-------~~~~l~~~~~~~Gv~~~~~~~-------~ 386 (425)
T PRK09264 321 EKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGDGE-------LAGKIAAEAFENGLIIETSGP-------E 386 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecChH-------HHHHHHHHHHHCCCEEeccCC-------C
Confidence 89999999999998876431 12221112345788888886543 567899999999999976432 2
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCCC
Q psy15447 421 KPSIRITCNISHTEQDMNSLIETLCKSHDIAVQPL 455 (457)
Q Consensus 421 ~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~~ 455 (457)
.+++|++|++.+|++|+++++++|+++++++.+.+
T Consensus 387 ~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~~~~ 421 (425)
T PRK09264 387 DEVVKLLPPLTIDEEELEEGLDILEEAVAEVLAEE 421 (425)
T ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 47999999999999999999999999998876543
No 72
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=3.3e-39 Score=318.77 Aligned_cols=351 Identities=17% Similarity=0.158 Sum_probs=267.3
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|.||| .|||+||||.++ ..+|++ ||+|.+|+.+|+++..+.+ . . ..++...+|.++|++..
T Consensus 22 ~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~~--~-~--~~~~~~~~la~~L~~~~ 95 (408)
T PRK04612 22 RQVVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHN-DPDLVAALTEQAGKLWHTS--N-V--FYSAPPLKLAEELVTAS 95 (408)
T ss_pred CCceEEEeeeCEEEECCCCEEEEcCccHhhccCCCC-CHHHHHHHHHHHHhccccc--c-c--cCCHHHHHHHHHHHhhC
Confidence 46789999999999 599999999765 345554 8999999999999854321 1 1 14677889999999987
Q ss_pred C-CCcEEEecccHHHHHHHHHhhc------C----CCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCCC
Q psy15447 139 G-LEETALYSFGFSTSASAIAAYV------K----RNDAVFVDENINFAIQTGLIASRC------------KVQYFKHNN 195 (457)
Q Consensus 139 g-~~~~i~~~sG~~a~~~ai~a~~------~----~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~d 195 (457)
+ .++++|++||++|++.|++... + +.++|.....+|+.+..++..++. .+..++++|
T Consensus 96 ~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d 175 (408)
T PRK04612 96 RFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFND 175 (408)
T ss_pred CCCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCC
Confidence 5 4678999999999999998643 1 224677788899998887766542 234567789
Q ss_pred HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCccc-c
Q psy15447 196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVT-E 270 (457)
Q Consensus 196 ~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~-~ 270 (457)
++.+++.++. +++++|++||+++.+|.+.| +++|+++|++||++||+||+|+. +|++|..+. .
T Consensus 176 ~~~l~~~~~~----------~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg--~gr~G~~~a~~ 243 (408)
T PRK04612 176 VEALEAAMAG----------GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCG--MGRTGTLFAHW 243 (408)
T ss_pred HHHHHHhhCC----------CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--CCcCCchhhhh
Confidence 9999988742 46789999999987777764 89999999999999999999862 455565432 3
Q ss_pred ccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHH
Q psy15447 271 YFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREK 348 (457)
Q Consensus 271 ~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~ 348 (457)
++++.| |++ |++|++|+ +.|++++++++++.+....+..+|+ .+|+.|+++.++|+.+++. ++.++++++
T Consensus 244 ~~~~~p---di~--t~~K~l~~G~piga~~~~~~~~~~~~~~~~~~t~~--~~p~~~aaa~a~L~~~~~~-~l~~~~~~~ 315 (408)
T PRK04612 244 QEQVTP---DIV--TLAKALGGGFPIGAMLAGPKVAETMQFGAHGTTFG--GNPLAAAVARVALRKLASP-QIAANVARQ 315 (408)
T ss_pred hcCCCC---CEE--EEcchhcCCCceEEEEECHHHHhhhcCCCcCCCCC--CCHHHHHHHHHHHHHHHhc-cHHHHHHHH
Confidence 455555 555 89999963 3477888888888776544444444 5899999999999999764 689999999
Q ss_pred HHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe
Q psy15447 349 CNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC 428 (457)
Q Consensus 349 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~ 428 (457)
++++++.|+++....++....++.+.++.+.+..+.. ..+..+++.|.++|+++.+.+ .+.+|+.|
T Consensus 316 g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~-----~~a~~i~~~l~~~Gvlv~~~g---------~~~lRl~P 381 (408)
T PRK04612 316 SAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAHA-----GQAGAILDLAAEHGLLLLQAG---------PDVLRFVP 381 (408)
T ss_pred HHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCchh-----hHHHHHHHHHHHCCeEEeeCC---------CCEEEEcC
Confidence 9999999987542222221224567888888753210 145678899999999986532 47999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 429 NISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 429 ~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
++.+|++|+++++++++++++++..
T Consensus 382 pl~it~eeid~~l~~l~~~l~~~~~ 406 (408)
T PRK04612 382 ALNLTDAELADGLARLRLALADYVA 406 (408)
T ss_pred CccCCHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999987643
No 73
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=3.4e-39 Score=321.31 Aligned_cols=343 Identities=16% Similarity=0.172 Sum_probs=263.8
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|..+.+++|.|+|+ ||++||||.++ ..+|+ +||+|.+++.++++++++.+. .+ .++...+|+++|++++
T Consensus 23 ~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~~Gh-~~~~i~~a~~~~~~~~~~~~~---~~--~~~~~~~l~~~l~~~~ 96 (401)
T PRK00854 23 LDVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGH-CHPKILAAMVEQAGRLTLTSR---AF--RNDQLAPLYEELAALT 96 (401)
T ss_pred CCceEEeeeeCEEEECCCCEEEEcCcchhhccCCC-CCHHHHHHHHHHHhhcccccc---cc--CCHHHHHHHHHHHhhC
Confidence 367889999999994 99999998774 22333 489999999999999765432 11 3578899999999999
Q ss_pred CCCcEEEecccHHHHHHHHHhhc-----------CCCCEEEEeCcccHHHHHHHHhcC------------CeEEEecCCC
Q psy15447 139 GLEETALYSFGFSTSASAIAAYV-----------KRNDAVFVDENINFAIQTGLIASR------------CKVQYFKHNN 195 (457)
Q Consensus 139 g~~~~i~~~sG~~a~~~ai~a~~-----------~~gd~v~~~~~~h~~~~~~~~~~g------------~~~~~~~~~d 195 (457)
|.+.+++++||++|++.|++++. ++.++|..+..+|+++...+.+++ ..+..++++|
T Consensus 97 ~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 176 (401)
T PRK00854 97 GSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFGD 176 (401)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCCCC
Confidence 99999999999999999998874 234677888889998766554322 2456788899
Q ss_pred HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCccc-c
Q psy15447 196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVT-E 270 (457)
Q Consensus 196 ~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~-~ 270 (457)
++++++.+. +++++|++|+++|++|.+.| +++|+++|++||++||+||+|+ | +|++|.++. +
T Consensus 177 ~~~le~~i~-----------~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g-~g~~g~~~~~~ 243 (401)
T PRK00854 177 AEALEAAIT-----------PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-G-LGRTGKLLAEE 243 (401)
T ss_pred HHHHHHHhC-----------CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCCCchHhHHh
Confidence 999998874 25689999999999999987 9999999999999999999997 3 455554432 4
Q ss_pred ccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHH
Q psy15447 271 YFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLRE 347 (457)
Q Consensus 271 ~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~ 347 (457)
++++.| |++ +++|+++. ++|++++++++++.++......+++ .+|+.+++++++|+.+++. ++.+++++
T Consensus 244 ~~g~~~---D~~--~~~K~l~gg~~~ig~v~~~~~~~~~l~~~~~~~t~~--~~~~~~aa~~a~L~~l~~~-~~~~~~~~ 315 (401)
T PRK00854 244 HEGIEA---DVT--LIGKALSGGFYPVSAVLSNSEVLGVLKPGQHGSTFG--GNPLACAVARAALKVLTEE-GMIENAAE 315 (401)
T ss_pred hcCCCC---CEE--EecccccCCccCeEEEEEcHHHHhcccCCCCCCCCC--cCHHHHHHHHHHHHHHHHc-CHHHHHHH
Confidence 567665 666 46899952 3578999999988876443333443 4999999999999988754 47899999
Q ss_pred HHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEE
Q psy15447 348 KCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRIT 427 (457)
Q Consensus 348 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~ 427 (457)
+++++.+.|+++.. ..+.. ..+.+.++.+.+..+. ....++++.|.++||++.+.. .+++|++
T Consensus 316 ~~~~l~~~L~~~~~-~~~~~-~~g~g~~~~i~~~~~~------~~~~~~~~~L~~~GV~v~~~~---------~~~lR~~ 378 (401)
T PRK00854 316 MGAYFLEGLRSIRS-NIVRE-VRGRGLMLAVELEPEA------GGARQYCEALKERGLLAKDTH---------DHTIRLA 378 (401)
T ss_pred HHHHHHHHHHhhcc-CceEE-EeccceEEEEEEecCc------hhHHHHHHHHHHCCeEEecCC---------CCEEEEe
Confidence 99999999988321 11111 1345666766554321 045679999999999986432 4799999
Q ss_pred ecCCCCHHHHHHHHHHHHHHHH
Q psy15447 428 CNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 428 ~~~~~t~edi~~~~~~l~~~~~ 449 (457)
|++.+|++||++++++|++++.
T Consensus 379 p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 379 PPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred CCcccCHHHHHHHHHHHHHHhh
Confidence 9999999999999999998763
No 74
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-39 Score=324.18 Aligned_cols=362 Identities=17% Similarity=0.181 Sum_probs=263.2
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+|+| .|||+||||.++ ..+|+ +||+|.+|+++|+.+...... . ...++...+|+++|++.+
T Consensus 45 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~ql~~~~~~~~--~--~~~~~~~~~la~~L~~~~ 119 (464)
T PRK06938 45 IPLALKRARGIYVEDVEGRQFIDCLAGAGTLALGH-NHPVVIEAIQQVLADELPLHT--L--DLTTPVKDQFVQDLFASL 119 (464)
T ss_pred CCceEEeccccEEEeCCCCEEEEccCCccccccCC-CCHHHHHHHHHHHHhhhcccc--c--ccCCHHHHHHHHHHHHhC
Confidence 47889999999999 599999999765 33455 489999999999975221111 1 125788889999999977
Q ss_pred CC-----CcEEEe-cccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC------------eEEEec--CC-
Q psy15447 139 GL-----EETALY-SFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC------------KVQYFK--HN- 194 (457)
Q Consensus 139 g~-----~~~i~~-~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~--~~- 194 (457)
+. ++++|+ +||++|++.|++.. .++..+|.....+|+.+..++.+++. .+..++ ++
T Consensus 120 p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~ 199 (464)
T PRK06938 120 PEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDY 199 (464)
T ss_pred cccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccc
Confidence 53 246666 69999999999864 46667888899999998887776542 122222 21
Q ss_pred --------------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCc
Q psy15447 195 --------------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESV 256 (457)
Q Consensus 195 --------------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~ 256 (457)
+.+.+++.+++... +.+.+++||+||+++.+|.+.| +++++++|++||++||+||++
T Consensus 200 ~~~~~~~~~~~~~~~~~~l~~~i~~~~~-----~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~ 274 (464)
T PRK06938 200 RCPFGLGGEAGVRANLHYLENLLDDPES-----GVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQ 274 (464)
T ss_pred cccccCchhhHHHHHHHHHHHHHHhhcc-----CCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 14566777754210 1146899999999999898766 899999999999999999997
Q ss_pred c-cccccCCCCc-cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHH
Q psy15447 257 S-FGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKAL 332 (457)
Q Consensus 257 ~-~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l 332 (457)
+ +|+ +|.+ ..+++|+.| ||+ +++|++|+ +-|++++++++ +.+....++.+| +.+|++|++++++|
T Consensus 275 tGfGR---tG~~~a~e~~gv~P---Div--~~gKglggG~PlsAv~~~~~~-~~~~~~~~~~T~--~gnpla~Aaa~a~L 343 (464)
T PRK06938 275 SGFGR---TGKMFAFEHAGIIP---DVV--VLSKAIGGSLPLAVVVYREWL-DTWQPGAHAGTF--RGNQMAMAAGSATL 343 (464)
T ss_pred cCCCc---CcHHHHHHhcCCCC---CEE--EeeccccCCCceEEEeehhHh-hccCCCCCCCCC--CcCHHHHHHHHHHH
Confidence 5 544 4544 458899988 787 79999963 33667777774 544322333333 45999999999999
Q ss_pred HHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-------HHHHHHHHHHHHHHHHcCe
Q psy15447 333 HLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-------VASKKLLQTICDMCIQAGF 405 (457)
Q Consensus 333 ~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~~l~~~Gi 405 (457)
++++++ ++.+++++++++|++.|+++....++....+..+.++.+.+..+... .........+.+.|+++|+
T Consensus 344 ~~l~~~-~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gl 422 (464)
T PRK06938 344 RYIKEH-RLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGL 422 (464)
T ss_pred HHHHHh-HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCe
Confidence 999765 58899999999999999875321222222245688888888543210 0011245678899999999
Q ss_pred eEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 406 AITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 406 ~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
++.+.. ...+.+||.|++.+|++|+++++++++++++++..
T Consensus 423 l~~~~g-------~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~~ 463 (464)
T PRK06938 423 ILELGG-------RHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAAVA 463 (464)
T ss_pred EEeecC-------CCCCEEEEECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 986532 12478999999999999999999999999987643
No 75
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=6.5e-39 Score=319.74 Aligned_cols=360 Identities=18% Similarity=0.159 Sum_probs=269.5
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+||| .|||+||||.++ ..+|++ ||+|.+|+.+|+.+..+.+. .+..++...+|+++|++.+
T Consensus 23 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~ql~~~~~~~~----~~~~~~~~~~la~~L~~~~ 97 (443)
T PRK08360 23 YPLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHN-NPRVVKAIKEQTDKLIHYTP----IYGFPVEPLLLAEKLIEIA 97 (443)
T ss_pred CCceEEecceeEEEECCCCEEEEccccHhhcccCCC-CHHHHHHHHHHHHhccCccc----cccCcHHHHHHHHHHHHhC
Confidence 37889999999999 599999999775 345654 89999999999998644322 1235788899999999987
Q ss_pred CC--CcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCCC------
Q psy15447 139 GL--EETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHNN------ 195 (457)
Q Consensus 139 g~--~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~d------ 195 (457)
+. ++++|++||++|++.|++.. +++..++.....+|+.+..++.+++.. +..+++++
T Consensus 98 p~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (443)
T PRK08360 98 PGDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPF 177 (443)
T ss_pred CCCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccc
Confidence 64 57889999999999999854 566777888889999887776655521 22222222
Q ss_pred -----------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCccccc
Q psy15447 196 -----------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGT 260 (457)
Q Consensus 196 -----------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~ 260 (457)
.+.+++.++... .++++++|++||+++++|.+.| +++|+++|++||++||+||+|+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~l~~~~------~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g-- 249 (443)
T PRK08360 178 GKEPGSCKMECVEYIKEKFEGEV------YAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSG-- 249 (443)
T ss_pred cCchhhhHHHHHHHHHHHHHhcc------CCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--
Confidence 234455554311 1257899999999999998876 88999999999999999999863
Q ss_pred ccCCCCcc-ccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh
Q psy15447 261 LGSTGHGV-TEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA 337 (457)
Q Consensus 261 ~g~~g~~~-~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~ 337 (457)
+|++|.++ .+++++.| |++ |+||++|. +.|++++++++++.+.... +.++.+.+|+.+++++++|+.+++
T Consensus 250 ~gr~G~~~a~~~~~~~p---Dii--tlsK~l~~G~pigav~~~~~i~~~~~~~~--~~~T~~~~p~~~aaa~a~l~~l~~ 322 (443)
T PRK08360 250 LGRTGKWFAIEHFGVEP---DII--TLGKPLGGGLPISATIGRAEIMDSLPPLA--HAFTLSGNPVASAAALAVIEEIEE 322 (443)
T ss_pred CCcCccchhhhhcCCCC---CEE--EecccccCCceeEEEEEcHHHHhhhcCCC--CCCCCCcCHHHHHHHHHHHHHHHH
Confidence 45556543 46678877 666 79999973 3588999999998886433 344555699999999999999976
Q ss_pred CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCccc
Q psy15447 338 NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLDQE 416 (457)
Q Consensus 338 ~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~ 416 (457)
. ++.++++++++++++.|+++....++....+..+.++.+.+.++... ......+..+.+.|+++|+++.+..
T Consensus 323 ~-~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----- 396 (443)
T PRK08360 323 K-NLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFFS----- 396 (443)
T ss_pred c-CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeecC-----
Confidence 5 48899999999999999874311122112245678888877543211 1112245678899999999986532
Q ss_pred cCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 417 AKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 417 ~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
.+.+|++|++.+|++|+++++++++++++.+.
T Consensus 397 ----~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~ 428 (443)
T PRK08360 397 ----GNVLRIQPPLTIEKEVLDEGLDILEEAIEDVE 428 (443)
T ss_pred ----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999998764
No 76
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=2.9e-39 Score=320.53 Aligned_cols=353 Identities=15% Similarity=0.191 Sum_probs=262.7
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+|+| .||++||||.++ ..+|++ ||+|.+|+.+|+.+.+..+. ....++...+|.++|++..
T Consensus 17 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~ql~~~~~~~~----~~~~~~~~~~lae~l~~~~ 91 (412)
T TIGR02407 17 FPTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGHN-NPKLKQALIDYLADDGIIHS----LDMATEAKREFLETFNEII 91 (412)
T ss_pred CCceEEecccCEEEeCCCCEEEEcccchhhccCCCC-CHHHHHHHHHHHhhccceec----cccCcHHHHHHHHHHHHhc
Confidence 47889999999999 599999999775 334554 89999999999987554322 1124688899999999974
Q ss_pred --C--CC-cEEEe-cccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC------------eEEEecC----
Q psy15447 139 --G--LE-ETALY-SFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC------------KVQYFKH---- 193 (457)
Q Consensus 139 --g--~~-~~i~~-~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~---- 193 (457)
+ .. +++|+ +||++|++.|++.. .++..+|.....+|+.+..++.+++. .+..+|.
T Consensus 92 ~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~ 171 (412)
T TIGR02407 92 LKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYL 171 (412)
T ss_pred cCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCcc
Confidence 2 22 45565 89999999999865 35666788899999999888776542 2233343
Q ss_pred ----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCC
Q psy15447 194 ----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTG 265 (457)
Q Consensus 194 ----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g 265 (457)
++++.+++.+++... +.+.+++|++||+++++|.+.| +++|+++|++||++||+||+++ | +|++|
T Consensus 172 ~~~~~~~~~l~~~~~~~~~-----~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G-~GRtG 244 (412)
T TIGR02407 172 GGDVDTIAYFEKLLEDSSS-----GVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQA-G-CGRTG 244 (412)
T ss_pred ccchhHHHHHHHHHHhccC-----CCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCccc
Confidence 346778888864321 1246789999999999998654 8999999999999999999986 2 45556
Q ss_pred Ccc-ccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH-HhhCcH
Q psy15447 266 HGV-TEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHL-LKANPS 340 (457)
Q Consensus 266 ~~~-~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~-~~~~~~ 340 (457)
.++ .+++++.| ||+ +++|++|+.| |++++++++ +.+....+..+| +.+|+.|+++.++++. ++ +++
T Consensus 245 ~~~a~~~~~v~P---Di~--~~~K~lg~~G~pigav~~~~~~-~~~~~~~~~~T~--~gnpl~~aaa~a~l~~~i~-~~~ 315 (412)
T TIGR02407 245 TFFSFEPAGIEP---DIV--CLSKSISGYGLPLALTLIKPEL-DVWKPGEHNGTF--RGNNLAFVTATAALEYYWS-DDA 315 (412)
T ss_pred hhHHhcccCCCC---CEE--EechhccCCccceeEEEEchhh-hccCCCccCCCC--CccHHHHHHHHHHHHHHhc-ccH
Confidence 553 47788887 666 7999997523 788888775 444322233333 4599999999999996 54 456
Q ss_pred HHHHHHHHHHHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCC
Q psy15447 341 LLTKLREKCNTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKK 419 (457)
Q Consensus 341 ~~~~l~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~ 419 (457)
+.++++++++++++.|+++.. .+++....+..+.++++.+.+.. ....+.+.|+++||++.+.. .
T Consensus 316 l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~~~-------~~~~~~~~~~~~Gv~v~~~~-------~ 381 (412)
T TIGR02407 316 FEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECGDGD-------LAGKIAKAAFENGLIIETSG-------P 381 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEEecChH-------HHHHHHHHHHHCCCEEeccC-------C
Confidence 889999999999998876332 22222333456888899987653 56689999999999997643 1
Q ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 420 QKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 420 ~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
..+.+||+|++.+|++|++++++++++++++
T Consensus 382 ~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 382 NDEVIKLLPPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHhC
Confidence 2478999999999999999999999998753
No 77
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=5.5e-39 Score=320.42 Aligned_cols=382 Identities=18% Similarity=0.238 Sum_probs=287.0
Q ss_pred ChhhHHHHHcccCCCCCCCcccccccc-CCceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHh
Q psy15447 35 HTINVDALINNWTPEPIVSKAEKFKDV-SSKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDK 109 (457)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~ 109 (457)
+++++-|...+..|.+...|....... ..|.++++++|.++| .||++||||.++ .++|+ +||+|.+++.+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~G~~l~d~dG~~~lD~~~g~~~~~lGh-~~p~i~~a~~~~~~~ 81 (426)
T PRK00062 3 KSEELFERAKKLIPGGVNSPVRAFKSVGGTPRFIERAKGAYLYDVDGNEYIDYVGSWGPMILGH-AHPEVVEAVIEAAEK 81 (426)
T ss_pred hhHHHHHHHHHhCCCCcCCcccccCCCCCCCeEEEeCcCCEEEeCCCCEEEEcccchhhhhcCC-CCHHHHHHHHHHHHh
Confidence 466888888999988886655433222 346789999999999 599999999886 45677 599999999999988
Q ss_pred cCCCCCCCCCcccChHHHHHHHHHHHhhc-CCCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcC
Q psy15447 110 NGVGSCGPRGFYGTNVVHLDLENDIASFM-GLEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASR 185 (457)
Q Consensus 110 ~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g 185 (457)
+.. .+..++...+|+++|++.+ +.+++++++||++|++.|++.. .++.++|..+..+|+.+......++
T Consensus 82 -~~~------~~~~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~ 154 (426)
T PRK00062 82 -GLS------FGAPTELEVELAELVIELVPSIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAG 154 (426)
T ss_pred -CCc------CCCCCHHHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccC
Confidence 332 1235677889999999876 4678899999999999999874 4566778888889997644333311
Q ss_pred -------------------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHH
Q psy15447 186 -------------------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSL 242 (457)
Q Consensus 186 -------------------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l 242 (457)
.....++++|++++++.+++.. +++++|++||+++++|.+.| +++|+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~--------~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l 226 (426)
T PRK00062 155 SGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYG--------DEIAAVIVEPVAGNMGVVPPKPGFLEGLREL 226 (426)
T ss_pred ccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCC--------CcEEEEEEeCCcCCCCCcCCCHHHHHHHHHH
Confidence 1245678899999999886532 46789999999999999988 9999999
Q ss_pred HHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceec-CC
Q psy15447 243 RSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFS-AS 319 (457)
Q Consensus 243 ~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~-~~ 319 (457)
|++||+++|+||+|+..++|. .+..+++++.| |++ +++|++|. +.|++++++++++.+......+.++ .+
T Consensus 227 ~~~~~~llI~DEv~~G~r~g~--~~~~~~~~~~p---Di~--~~gK~l~~G~p~ga~~~~~~i~~~~~~~~~~~~~~T~~ 299 (426)
T PRK00062 227 CDEHGALLIFDEVMTGFRVAL--GGAQGYYGVTP---DLT--TLGKIIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLS 299 (426)
T ss_pred HHHcCCEEEEeechhccccCC--ccHHHHhCCCc---chH--hhhhHhhCCCcceeeeEHHHHHHhhccCCCceecccCc
Confidence 999999999999997434442 45567788877 554 89999963 3578899999999886433333333 35
Q ss_pred CcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch------HHHHHHH
Q psy15447 320 LPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE------VASKKLL 393 (457)
Q Consensus 320 ~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~ 393 (457)
.+|+.|++++++|+.+++. ++.++++++.+++++.|+++....++....++.+.++.+.+..+... ..+...+
T Consensus 300 ~~p~~~aaa~a~L~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~ 378 (426)
T PRK00062 300 GNPLAMAAGLATLKLLKEP-GFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERF 378 (426)
T ss_pred CCHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHH
Confidence 7999999999999998765 58899999999999988763211243332245688888877643110 0111245
Q ss_pred HHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 394 QTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 394 ~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
..+.+.|+++||++.+..+ +.+++ ++.+|++|+++++++++++++.+
T Consensus 379 ~~i~~~l~~~Gv~v~~~~~---------~~~~~--~~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 379 ARFFHAMLDEGVYLAPSQF---------EAGFV--SAAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred HHHHHHHHHCCeEeecCCc---------Cceee--eccCCHHHHHHHHHHHHHHHHhh
Confidence 6799999999999877543 34555 47899999999999999998754
No 78
>PLN00144 acetylornithine transaminase
Probab=100.00 E-value=2.6e-39 Score=317.92 Aligned_cols=340 Identities=17% Similarity=0.191 Sum_probs=263.7
Q ss_pred eecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc
Q psy15447 67 VDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE 142 (457)
Q Consensus 67 i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~ 142 (457)
+++++|+|+| .||++||||.++ ..+|+. ||+|.+|+.+|+.+..+... ...++...+|+++|++..+.++
T Consensus 1 ~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~~~-----~~~~~~~~~la~~l~~~~~~~~ 74 (382)
T PLN00144 1 FVSGKGCKLYDVEGKEYLDMAAGIAVNALGHG-DPDWVKAVAEQAGTLAHVSN-----VYHTIPQVELAKRLVASSFADR 74 (382)
T ss_pred CeeeeccEEEeCCCCEEEECCcCHHhccCCCC-CHHHHHHHHHHHHhcCCccc-----cccCHHHHHHHHHHHhcCCCCe
Confidence 4689999999 599999999875 245664 89999999999998543211 1236788999999999888888
Q ss_pred EEEecccHHHHHHHHHhhc---C-------------CCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCC
Q psy15447 143 TALYSFGFSTSASAIAAYV---K-------------RNDAVFVDENINFAIQTGLIASRC------------KVQYFKHN 194 (457)
Q Consensus 143 ~i~~~sG~~a~~~ai~a~~---~-------------~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~ 194 (457)
+++++||++|++.|++... + +.++|.....+|+.+...+.+++. .+..++++
T Consensus 75 v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 154 (382)
T PLN00144 75 VFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYG 154 (382)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCC
Confidence 9999999999999998642 2 245778888999998887776542 23567788
Q ss_pred CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-c
Q psy15447 195 NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-T 269 (457)
Q Consensus 195 d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~ 269 (457)
|++++++.++. .++++|++||+++++|.+.+ +++|+++|++||+++|+||+++. +|++|.++ .
T Consensus 155 d~~~l~~~~~~----------~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg--~gr~g~~~~~ 222 (382)
T PLN00144 155 NLEAARKLIQK----------GKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCG--LGRTGYLWAH 222 (382)
T ss_pred CHHHHHHhcCC----------CCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC--CCccchHhhh
Confidence 99999988742 46789999999999666543 78999999999999999999863 45555443 3
Q ss_pred cccCCCCCCccEEEecCccccc--CcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHH
Q psy15447 270 EYFGVSTEEVDMIIGSLEHALG--SVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLRE 347 (457)
Q Consensus 270 ~~~~~~~~~~Di~~~s~sK~lg--~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~ 347 (457)
+++++.| ||+ ||||+++ .+.|++++++++++.+....+..+| +.+|+.|+++.++|+++++ +++.+++++
T Consensus 223 ~~~~~~P---Di~--t~sK~l~~G~pig~v~~~~~~~~~~~~~~~~~T~--~~~pl~~aaa~a~l~~i~~-~~~~~~~~~ 294 (382)
T PLN00144 223 EAYGVEP---DIM--TLAKPLAGGLPIGAVLVTEKVASAINPGDHGSTF--AGGPLVCNAALAVLDKISK-PGFLASVAK 294 (382)
T ss_pred hhcCCCC---CEE--EecccccCCcceEEEEEcHHHHhccCCCCCCCCC--CCCHHHHHHHHHHHHHHhh-chHHHHHHH
Confidence 5788887 554 8999995 4568999999999887644433334 4699999999999999975 458889999
Q ss_pred HHHHHHHHhhccc-ccCCe-EEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEE
Q psy15447 348 KCNTMHSLLSQHK-VTQRF-LVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIR 425 (457)
Q Consensus 348 ~~~~l~~~L~~~~-~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lR 425 (457)
+++++++.|+++. ..+.+ .+ ...+.++++.+.. ....+++.++++||++.+... .+.+|
T Consensus 295 ~g~~l~~~l~~~~~~~~~~~~v--rg~G~~~~l~l~~---------~~~~~~~~~~~~Gv~i~~~~~--------~~~lr 355 (382)
T PLN00144 295 KGEYLRELLRRKLGGNPHVKEV--RGVGLLVGIQLDV---------PAGPLVDACRDSGLLVLTAGK--------GDVVR 355 (382)
T ss_pred HHHHHHHHHHHHHhhCCCceee--ecCceEEEEEecC---------ccHHHHHHHHHCCeEEeecCC--------CCEEE
Confidence 9999888776531 12222 22 2478889998832 235788999999999976531 37999
Q ss_pred EEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 426 ITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 426 i~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
++|+..+|++|+++++++|++++..+
T Consensus 356 l~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 356 LVPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred EeCCCccCHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999998653
No 79
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=4.7e-39 Score=320.73 Aligned_cols=369 Identities=15% Similarity=0.120 Sum_probs=266.3
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+||| .||++||||.++ ..+|++ ||+|.+++.+|+++..+.... ...++...+|+++|++++
T Consensus 12 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~av~~ql~~~~~~~~~----~~~~~~~~~lae~L~~~~ 86 (443)
T PRK07483 12 TLPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGHS-HPRVIAAIHAQIDRLAYAHTS----FFTTEPAEALADRLVAAA 86 (443)
T ss_pred CCceEEeceEEEEEeCCCCEEEEcCccHhhhccCCC-CHHHHHHHHHHHHhccCcccc----ccCCHHHHHHHHHHHHhC
Confidence 47899999999999 599999999874 345554 899999999999985432211 124788899999999987
Q ss_pred C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCeE------------EEec---
Q psy15447 139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCKV------------QYFK--- 192 (457)
Q Consensus 139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~~------------~~~~--- 192 (457)
+ .++++|++||++|++.|++... ++.++|.....||+.+..++.+++... ..++
T Consensus 87 p~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~ 166 (443)
T PRK07483 87 PAGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCY 166 (443)
T ss_pred CCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCc
Confidence 4 5688999999999999998543 234567778999999888877664211 1111
Q ss_pred -CCCH--------------HHHHHHHHhhchhcccCCCCccEEEEEecCCCC-CCCCCC----hHHHHHHHHHcCcEEEE
Q psy15447 193 -HNNM--------------QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN-SADICP----LKDILSLRSKYQARIFV 252 (457)
Q Consensus 193 -~~d~--------------~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~-~G~i~~----l~~i~~l~~~~g~~li~ 252 (457)
+++. +++++.+.... ++.+++|++||+++. +|.+.| +++|+++|++||++||+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~ 239 (443)
T PRK07483 167 AYREQRAGESDEAYGQRLADELEAKILELG-------PDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLIL 239 (443)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHHhcC-------CCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEE
Confidence 2221 45555554321 257899999999974 676665 89999999999999999
Q ss_pred EcCcccccccCCCCc-cccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCC--cceecCCCcHHHHH
Q psy15447 253 DESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGS--GYCFSASLPPFLAV 326 (457)
Q Consensus 253 DEa~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a 326 (457)
||+++. +|++|.+ ..+++|+.| ||+ +++|++|+ +.|++++++++++.+..... .+..+.+.+|++|+
T Consensus 240 DEV~tG--fGRtG~~~a~~~~gv~P---Div--~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~a 312 (443)
T PRK07483 240 DEVMCG--MGRTGTLFACEEDGVAP---DLV--TIAKGLGAGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACA 312 (443)
T ss_pred ecceeC--cccCcHHHHHhhcCCCC---Cee--eehhhhccCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHH
Confidence 999752 3455554 457899988 787 89999962 45778899999887753211 12223345999999
Q ss_pred HHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHHHHH
Q psy15447 327 AANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDMCIQ 402 (457)
Q Consensus 327 aa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l~~ 402 (457)
+++++|++++++ .+.+++++++++|++.|+++....++....+..+.++.+.+..+... .........+.+.+++
T Consensus 313 aa~a~l~~i~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (443)
T PRK07483 313 AALAVQRVIAED-GLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMA 391 (443)
T ss_pred HHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHH
Confidence 999999999865 48899999999999999763211222112245688888887543210 0111235678899999
Q ss_pred cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 403 AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 403 ~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
+|+++.+...... ...++.+||.|++++|++|+|+++++|+++++++..
T Consensus 392 ~Gll~~~~~~~~~--~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 392 RGLMVYPMGGTID--GVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAALA 440 (443)
T ss_pred CCcEEEecCcccc--CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999976431000 011478999999999999999999999999987653
No 80
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-38 Score=317.78 Aligned_cols=356 Identities=19% Similarity=0.201 Sum_probs=263.9
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+|+| .||++||||.++ ..+|++ ||+|.+|+.+|+++..+... . ...++...+|+++|++.+
T Consensus 36 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~ql~~~~~~~~-~---~~~~~~~~~lAe~L~~~~ 110 (441)
T PRK05769 36 YPLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGHA-HPKVVKAVKEQAEKFLHYSL-T---DFYYEPAVELAERLVEIA 110 (441)
T ss_pred CCeeEEecceEEEEeCCCCEEEECCCchhhcccCCC-CHHHHHHHHHHHHhccCccC-c---ccCCHHHHHHHHHHHHhC
Confidence 47889999999999 599999999875 234554 89999999999998543221 1 114678899999999987
Q ss_pred C---CCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC-------------eEEEecCC-----
Q psy15447 139 G---LEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC-------------KVQYFKHN----- 194 (457)
Q Consensus 139 g---~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~-------------~~~~~~~~----- 194 (457)
+ .++++|++||++|++.|++.. +++.++|.....||+.+...+.+++. .+..++++
T Consensus 111 p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (441)
T PRK05769 111 PGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRN 190 (441)
T ss_pred CCCCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccc
Confidence 5 468889999999999999754 56777888899999998887776532 12222221
Q ss_pred -----CH--------HHHHH-HHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCc
Q psy15447 195 -----NM--------QHLEE-LLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESV 256 (457)
Q Consensus 195 -----d~--------~~le~-~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~ 256 (457)
++ +.+++ ++++.. .++.+++|++||+++++|.+.| +++|+++|++||+++|+||++
T Consensus 191 ~~~~~~~~~~~~~~~~~le~~~~~~~~------~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~ 264 (441)
T PRK05769 191 PWGIENPEECGNAVLDFIEDYLFKKLV------PPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQ 264 (441)
T ss_pred cccCCchHHHHHHHHHHHHHHHHhhcc------CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 22 22444 222100 1257899999999999999988 999999999999999999998
Q ss_pred ccccccCCCCcc-ccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHH
Q psy15447 257 SFGTLGSTGHGV-TEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALH 333 (457)
Q Consensus 257 ~~g~~g~~g~~~-~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~ 333 (457)
+ | +|++|.++ .+++|+.| |++ +++|++|. +.|++++++++++.. ...+..+| +.+|+.|++++++|+
T Consensus 265 t-G-~gr~G~~~a~~~~gv~p---Div--t~~K~l~~G~p~gav~~~~~i~~~~-~~~~~~T~--~g~p~~~aaa~a~L~ 334 (441)
T PRK05769 265 T-G-MGRTGKMFAIEHFGVEP---DII--TLAKAIAGGLPLGAVIGRAELMFLP-PGSHANTF--GGNPVAAAAALATLE 334 (441)
T ss_pred h-C-CCcccceehhhccCCCC---CEE--EEcccccCCcccEEEEEehhhhhcC-CCCCCCCC--CcCHHHHHHHHHHHH
Confidence 7 3 56666653 57788877 776 79999963 358889998887543 22334444 359999999999999
Q ss_pred HHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccC
Q psy15447 334 LLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHL 413 (457)
Q Consensus 334 ~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~ 413 (457)
++++ ++.+++++++++|++.|+++....++.......+.++.+.+.++. .+........+.+.|+++||++.+..
T Consensus 335 ~l~~--~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~Gil~~~~~-- 409 (441)
T PRK05769 335 ELEE--GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDR-KEPDPKLRDKVLYEAFKRGLLLLGAG-- 409 (441)
T ss_pred HHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCC-ccccHHHHHHHHHHHHhCCcEEecCC--
Confidence 9987 689999999999999998743111221112345778888775431 01111245678899999999986533
Q ss_pred ccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 414 DQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 414 ~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
.+.+|++|++.+|++|||++++++++++..+
T Consensus 410 -------~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 410 -------KSAIRIIPPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred -------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3789999999999999999999999998754
No 81
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=6.2e-39 Score=316.95 Aligned_cols=339 Identities=17% Similarity=0.205 Sum_probs=265.8
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecCC---ccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATHN---YLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+.+++++|.++| .||++||||+|+. ++|+ +||+|.+|+.++++++... +. ....+...+|++.+++..
T Consensus 11 ~~~~~~~~~G~~~~d~~G~~~lD~~s~~~~~~lG~-~~p~v~~a~~~~~~~~~~~---~~--~~~~~~~~~la~~l~~~~ 84 (377)
T PRK02936 11 FPIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGH-CHPTVTKAVQEQLDDIWHV---SN--LFTNSLQEEVASLLAENS 84 (377)
T ss_pred CCceEEEeecCEEEeCCCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhcccc---cc--ccCCHHHHHHHHHHHhcC
Confidence 46789999999999 5999999999875 8887 6999999999999985432 11 134678888999999888
Q ss_pred CCCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCCCHHHHHHHH
Q psy15447 139 GLEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC------------KVQYFKHNNMQHLEELL 203 (457)
Q Consensus 139 g~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~d~~~le~~l 203 (457)
+.+.+++++||++|++.|++.. .+++++|..+..+|+++..++..++. .+..++++|++++++.+
T Consensus 85 ~~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 164 (377)
T PRK02936 85 AGDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVM 164 (377)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhc
Confidence 7788999999999999999864 45566788889999998888776653 23567888999999877
Q ss_pred HhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccccCCCCCC
Q psy15447 204 RQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYFGVSTEE 278 (457)
Q Consensus 204 ~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~~~~~~~ 278 (457)
. +++++|++|++++++|...+ +++|+++|++||+++|+||+|+ | +|++|.++ .+++++.|
T Consensus 165 ~-----------~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~-g-~g~~g~~~~~~~~~~~~-- 229 (377)
T PRK02936 165 N-----------EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQT-G-IGRTGTLFAYEQFGLDP-- 229 (377)
T ss_pred c-----------CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCcCchhhHHHhhCCCC--
Confidence 4 24689999999998887754 8999999999999999999985 3 46666553 35667766
Q ss_pred ccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHh
Q psy15447 279 VDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLL 356 (457)
Q Consensus 279 ~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L 356 (457)
|++ |+||+++. ++|++++++++++.+....... +.+.+|+.++++.++++.+... +.+++++++.+++++.|
T Consensus 230 -di~--t~sK~l~~G~~ig~v~~~~~~~~~~~~~~~~~--t~~~~~~~~aaa~a~l~~~~~~-~~~~~~~~~~~~l~~~L 303 (377)
T PRK02936 230 -DIV--TVAKGLGNGIPVGAMIGKKELGTAFGPGSHGS--TFGGNPLAMAAAKEVLQVIKQP-SFLEEVQEKGEYFLQKL 303 (377)
T ss_pred -cEE--EEcccccCCCccEEEEEcHHHHhhccCCCCCC--CCCCCHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHH
Confidence 555 89999973 4689999999988875433333 3346999999999999988543 47789999999999998
Q ss_pred hccc-ccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447 357 SQHK-VTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQ 435 (457)
Q Consensus 357 ~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e 435 (457)
++.. ..+.+... .+.+.++++.+..+ ...+.+.|.++||++.+.. .+++||+|+..+|++
T Consensus 304 ~~~~~~~~~~~~v-~~~g~~~~i~~~~~---------~~~~~~~l~~~gv~v~~~g---------~~~lRi~p~~~~~~~ 364 (377)
T PRK02936 304 QEELEHLECVKNI-RGKGLMIGIECTEE---------VAPVIEQLREEGLLVLSAG---------PNVIRLLPPLVVTKE 364 (377)
T ss_pred HHHHhhCCcEEeE-eecceEEEEEecch---------HHHHHHHHHHCCeEEecCC---------CCEEEEECCcccCHH
Confidence 7721 12232222 24567888887642 3568889999999987643 478999999999999
Q ss_pred HHHHHHHHHHHH
Q psy15447 436 DMNSLIETLCKS 447 (457)
Q Consensus 436 di~~~~~~l~~~ 447 (457)
++++++++|+++
T Consensus 365 ~i~~~i~~l~~~ 376 (377)
T PRK02936 365 ELDQAVYLLKKV 376 (377)
T ss_pred HHHHHHHHHHHh
Confidence 999999999875
No 82
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=345.34 Aligned_cols=362 Identities=16% Similarity=0.154 Sum_probs=272.2
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecCCccCCC-CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC-
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATHNYLSFV-ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG- 139 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~~~l~~~-~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g- 139 (457)
.|+.+++++|.|+| .|||+||||.++ +.+++ +||+|.+|+.+|+.+.... ++. .++.+.+|+++|+++++
T Consensus 567 ~p~~i~~g~G~~l~D~dG~~ylD~~~~-~~~lGh~hp~v~~Ai~~q~~~l~~~---~~~---~~~~~~elae~L~~~~p~ 639 (972)
T PRK06149 567 DPPQIERGWRHHLFDMAGRSYLDMVNN-VTVLGHGHPRLAAAAARQWSLLNTN---SRF---HYAAVAEFSERLAALAPD 639 (972)
T ss_pred CCCeEEEeeeeEEEeCCCCEEEECCCC-ccccCCCCHHHHHHHHHHHHhcccc---ccc---cCHHHHHHHHHHHHhCCC
Confidence 47789999999999 599999999865 44455 5999999999999885432 222 46788999999999884
Q ss_pred -CCcEEEecccHHHHHHHHH---hhcCCCCEEEEeCcccHHHHHHHHhcCCe-------------EEE----------ec
Q psy15447 140 -LEETALYSFGFSTSASAIA---AYVKRNDAVFVDENINFAIQTGLIASRCK-------------VQY----------FK 192 (457)
Q Consensus 140 -~~~~i~~~sG~~a~~~ai~---a~~~~gd~v~~~~~~h~~~~~~~~~~g~~-------------~~~----------~~ 192 (457)
.+.++|++||++|++.|++ +++++.++|..+..+|+.+..+..+++.. +.. ++
T Consensus 640 ~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~ 719 (972)
T PRK06149 640 GLDTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFR 719 (972)
T ss_pred CcCEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCC
Confidence 6789999999999999998 56788889999999999887665543210 111 11
Q ss_pred CCC-----HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCc-cccccc
Q psy15447 193 HNN-----MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESV-SFGTLG 262 (457)
Q Consensus 193 ~~d-----~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~-~~g~~g 262 (457)
+++ .+++++.++.... .++++++||+||+++++|.+.| +++|+++|++||+++|+||++ ++|++|
T Consensus 720 ~~~~~~~~~~~~~~~l~~~~~-----~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG 794 (972)
T PRK06149 720 GADSAADYVRDVVAQLEELDA-----SGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLG 794 (972)
T ss_pred CcccHHHHHHHHHHHHHHHhh-----cCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccC
Confidence 222 2445555543211 1257899999999999999888 999999999999999999998 676665
Q ss_pred CCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcH
Q psy15447 263 STGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPS 340 (457)
Q Consensus 263 ~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~ 340 (457)
..+. ..+++|+.| ||+ |++|++|. +.|++++++++++.+.... .+..+.+.+|++|++++++|++++++ .
T Consensus 795 ~~~~-a~e~~gv~P---Div--t~gK~lg~G~Pl~av~~~~~i~~~~~~~~-~~~sT~~gnP~~~aaala~L~~i~~e-~ 866 (972)
T PRK06149 795 HYFW-GFEQQGVVP---DII--TMAKGMGNGHPLGAVITRREIAEALEAEG-YFFSSTGGSPVSCRIGMAVLDVLREE-K 866 (972)
T ss_pred ccch-hhhhcCCCC---CEE--EecccccCCeeeEEEEEcHHHHhhhccCC-cccCCCCCCHHHHHHHHHHHHHHHhc-C
Confidence 4222 457889987 787 89999963 4588999999998876422 12223457999999999999999765 4
Q ss_pred HHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCccccCC
Q psy15447 341 LLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLDQEAKK 419 (457)
Q Consensus 341 ~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~ 419 (457)
+.+++++++++|++.|+++....++.......+.++.+.+..+... +........+++.|+++||++.+.+ .
T Consensus 867 l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g-------~ 939 (972)
T PRK06149 867 LQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTG-------D 939 (972)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeecC-------C
Confidence 8899999999999999875321222212245688888887532111 1122246789999999999997643 1
Q ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 420 QKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 420 ~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
..+++||.|++++|++|+|++++++++++++.
T Consensus 940 ~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~~ 971 (972)
T PRK06149 940 HLNILKIKPPLCLDRESADFFVDMLDRVLTEG 971 (972)
T ss_pred CCCEEEEECCCcCCHHHHHHHHHHHHHHHHhh
Confidence 24789999999999999999999999998753
No 83
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-38 Score=317.94 Aligned_cols=367 Identities=14% Similarity=0.131 Sum_probs=261.8
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+|+| .|||+||||.++ ..+|+ +||+|.+|+.+|+.+.-... +. ..+++...+|+++|++.+
T Consensus 40 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH-~~p~v~~Ai~~q~~~~~~~~--~~--~~~~~~~~~lAe~L~~~~ 114 (459)
T PRK06931 40 LPLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGH-NHPDVLQSIQDVLTSGLPLH--TL--DLTTPLKDAFSEYLLSLL 114 (459)
T ss_pred CCceEEeccccEEEeCCCCEEEEcccchhhccCCC-CCHHHHHHHHHHHhhhcccc--cc--ccCCHHHHHHHHHHHHhC
Confidence 47889999999999 499999999875 33455 48999999999998621111 11 125788899999999987
Q ss_pred CCC----cEEEe-cccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCCC---
Q psy15447 139 GLE----ETALY-SFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC------------KVQYFKHNN--- 195 (457)
Q Consensus 139 g~~----~~i~~-~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~d--- 195 (457)
+.. ..+|+ +||++|++.|++.. +++..+|.....||+.+..++.+++. .+..++.++
T Consensus 115 p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (459)
T PRK06931 115 PGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYR 194 (459)
T ss_pred CCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCcccc
Confidence 522 34455 89999999999854 56777888899999999888766542 122233222
Q ss_pred ----------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcc-ccc
Q psy15447 196 ----------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVS-FGT 260 (457)
Q Consensus 196 ----------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~-~g~ 260 (457)
.+.+++.+++..+.... ..+++++||+||+++.+|.+.| +++++++|++||++||+||+++ +|+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGR 273 (459)
T PRK06931 195 CPLGIGGEAGVKALTYYFENFIEDVES-GVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFAR 273 (459)
T ss_pred ccccCCchhHHHHHHHHHHHHHHhhhc-CCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCc
Confidence 23343333322111001 1256899999999999888765 8999999999999999999975 555
Q ss_pred ccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC
Q psy15447 261 LGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN 338 (457)
Q Consensus 261 ~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~ 338 (457)
+|. .+..+++|+.| ||+ +++|++|+ +-|++++++++ +.+....+..+| +.+|++|++++++|+++++.
T Consensus 274 tG~--~~a~~~~gv~P---Div--t~gK~l~gG~Pi~av~~~~~~-~~~~~~~~~~T~--~gnpla~aaala~L~~l~~~ 343 (459)
T PRK06931 274 TGK--MFAFEHAGIEP---DII--VMSKAVGGGLPLAVLGIKKEF-DAWQPGGHTGTF--RGNQLAMATGLTTLKILKEE 343 (459)
T ss_pred Cch--HHHhhhcCCCC---CEE--EecccccCCcceeeeeeHHHH-hhccCCCCCCCC--CCCHHHHHHHHHHHHHHHhC
Confidence 443 23568899988 787 89999963 23567777664 555333333333 46999999999999999765
Q ss_pred cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-------HHHHHHHHHHHHHHHHcCeeEeccc
Q psy15447 339 PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-------VASKKLLQTICDMCIQAGFAITCPS 411 (457)
Q Consensus 339 ~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~~l~~~Gi~v~~~~ 411 (457)
++.+++++++++|++.|+++....++.......+.++.+.+..+... ..+......+.+.|+++|+++.+..
T Consensus 344 -~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~ 422 (459)
T PRK06931 344 -NLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGG 422 (459)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecC
Confidence 48899999999999999875321222222245688888887543110 1112245678899999999987542
Q ss_pred cCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 412 HLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 412 ~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
...+.+|+.|++.+|++|+|+++++++++++++.+
T Consensus 423 -------~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~~ 457 (459)
T PRK06931 423 -------RNGNVVRLLPPLLITQAECEEFIDRFEQALLAAVK 457 (459)
T ss_pred -------CCCCEEEEECCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 12478999999999999999999999999987654
No 84
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-38 Score=314.87 Aligned_cols=357 Identities=13% Similarity=0.164 Sum_probs=264.3
Q ss_pred ceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447 64 KYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG 139 (457)
Q Consensus 64 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g 139 (457)
|+++++++|.|+| .|||+||||.++ ..+|++ ||+|.+|+.+|+++..+... ....++...+|+++|+++.+
T Consensus 23 p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~ql~~~~~~~~----~~~~~~~~~~la~~l~~~~p 97 (421)
T PRK06777 23 DFYAERAENATLWDVEGREYIDFAAGIAVLNTGHR-HPKVVAAVRQQLDQFTHTAY----QIVPYASYVTLAERINALAP 97 (421)
T ss_pred CeeEEeeecCEEEeCCCCEEEEcccCHHhhccCCC-CHHHHHHHHHHHhhcccccc----cccCChHHHHHHHHHHHhCC
Confidence 6889999999999 599999999775 345664 89999999999998643211 11256778899999999875
Q ss_pred ---CCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCCe-------------EEEecCCC-----
Q psy15447 140 ---LEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRCK-------------VQYFKHNN----- 195 (457)
Q Consensus 140 ---~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~~-------------~~~~~~~d----- 195 (457)
.++++|++||++|++.|++.. +++..+|.....+|+.+..++.+++.. +..+++++
T Consensus 98 ~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 177 (421)
T PRK06777 98 IDGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGV 177 (421)
T ss_pred CCCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCc
Confidence 468899999999999999854 466678888999999998887765521 11122222
Q ss_pred -----HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC-CC---hHHHHHHHHHcCcEEEEEcCcccccccCCCC
Q psy15447 196 -----MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI-CP---LKDILSLRSKYQARIFVDESVSFGTLGSTGH 266 (457)
Q Consensus 196 -----~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i-~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~ 266 (457)
++++++.+++.. .++.+++|++||+++++|.. .| +++|+++|++||++||+||+|+. +|++|.
T Consensus 178 ~~~~~~~~l~~~~~~~~------~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg--~gr~g~ 249 (421)
T PRK06777 178 SVEEALSSVERLFKADI------APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTG--FARTGK 249 (421)
T ss_pred CHHHHHHHHHHHHHhcc------CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC--CccCCc
Confidence 556777775311 02568999999999998864 44 89999999999999999999862 455555
Q ss_pred c-cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHH
Q psy15447 267 G-VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLT 343 (457)
Q Consensus 267 ~-~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~ 343 (457)
+ ..+++++.| |++ |+||++|+ +.|++++++++++.+....+..+| +.+|+.|++++++|+.+++ +++.+
T Consensus 250 ~~~~~~~~~~p---Div--~~sK~l~~G~pigav~~~~~i~~~~~~~~~~~T~--~~~p~~~aaa~a~L~~~~~-~~l~~ 321 (421)
T PRK06777 250 LFAMEYYDVKP---DLI--TMAKSLGGGMPISAVVGRAEVMDAPAPGGLGGTY--AGNPLAVAAALAVLDVIAE-EKLCQ 321 (421)
T ss_pred hhhhhhcCCCC---CEE--eeehhhcCCCceEEEEEcHHHHhccCCCCCCCCC--CcCHHHHHHHHHHHHHHHh-ccHHH
Confidence 4 457788877 666 89999962 348899999998887644333333 4699999999999998876 45889
Q ss_pred HHHHHHHHHHHHhhccccc-CCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCC
Q psy15447 344 KLREKCNTMHSLLSQHKVT-QRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKP 422 (457)
Q Consensus 344 ~l~~~~~~l~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~ 422 (457)
+++++++++++.|+++... +.+..+ .+.+.++.+.+..+............+.+.++++||++.+... ..+
T Consensus 322 ~~~~~g~~l~~~L~~l~~~~~~i~~v-rg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~-------~g~ 393 (421)
T PRK06777 322 RALILGAHLVEVLEKAKASCPAIVDI-RARGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGV-------HGN 393 (421)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEe-cCceEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCC-------CCC
Confidence 9999999999999874321 222222 4567777776643211111112456677888999999977532 137
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 423 SIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 423 ~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
++||+|++.+|++++++++++|++++.
T Consensus 394 ~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 394 VIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998763
No 85
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=8.1e-39 Score=319.40 Aligned_cols=366 Identities=16% Similarity=0.133 Sum_probs=267.0
Q ss_pred eeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-
Q psy15447 66 VVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL- 140 (457)
Q Consensus 66 ~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~- 140 (457)
++++++|+|+| .|||+||||.++ ..+|++ ||+|.+|+.+|+++..+... + ...++...+|+++|++.++.
T Consensus 16 ~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-hp~v~~Ai~~ql~~~~~~~~-~---~~~~~~~~~lae~L~~~~p~~ 90 (447)
T PRK06917 16 VISHGKGVYLYDQNGNKYFDGSSGAVTAGIGHG-VKEIADAIKEQAEEVSFVYR-S---QFTSEPAEKLAKKLSDLSPGD 90 (447)
T ss_pred eEEeeeeeEEEeCCCCEEEECchhHHhccCCCC-CHHHHHHHHHHHhhCcCccc-c---ccCCHHHHHHHHHHHHhCCCC
Confidence 68999999999 599999999875 235554 89999999999998543221 1 11468889999999998763
Q ss_pred -CcEEEecccHHHHHHHHHhh---------cCCCCEEEEeCcccHHHHHHHHhcCCeE------------EEe--cC---
Q psy15447 141 -EETALYSFGFSTSASAIAAY---------VKRNDAVFVDENINFAIQTGLIASRCKV------------QYF--KH--- 193 (457)
Q Consensus 141 -~~~i~~~sG~~a~~~ai~a~---------~~~gd~v~~~~~~h~~~~~~~~~~g~~~------------~~~--~~--- 193 (457)
+.++|++||++|++.|++.. .++..+|.....+|+.+...+.+++... ..+ +.
T Consensus 91 ~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 170 (447)
T PRK06917 91 LNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYR 170 (447)
T ss_pred CCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccc
Confidence 57888999999999999876 2344577778889999888777665211 111 10
Q ss_pred ------------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC-CCCCCC----hHHHHHHHHHcCcEEEEEcCc
Q psy15447 194 ------------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN-SADICP----LKDILSLRSKYQARIFVDESV 256 (457)
Q Consensus 194 ------------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~-~G~i~~----l~~i~~l~~~~g~~li~DEa~ 256 (457)
++.+.+++.+++.. ++++++|++||+++. +|.+.| +++|+++|++||++||+||++
T Consensus 171 ~~~~~~~~~~~~~~~~~le~~i~~~~-------~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~ 243 (447)
T PRK06917 171 CPVQKVYPTCQLACATELETAIERIG-------AEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVM 243 (447)
T ss_pred cccCCChHHHHHHHHHHHHHHHHhcC-------CCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 12345666665432 247899999999985 455554 899999999999999999998
Q ss_pred ccccccCCCCcc-ccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcc--eecCCCcHHHHHHHHH
Q psy15447 257 SFGTLGSTGHGV-TEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGY--CFSASLPPFLAVAANK 330 (457)
Q Consensus 257 ~~g~~g~~g~~~-~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~aaa~a 330 (457)
+ | +|++|.++ .+++++.| ||+ +++|++|. +.|++++++++++.+......+ ..+.+.+|+.|+++++
T Consensus 244 t-G-fGRtG~~~a~~~~gv~P---Di~--~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a 316 (447)
T PRK06917 244 T-G-LGRTGAMFAMEHWGVEP---DIM--TLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALA 316 (447)
T ss_pred h-C-cCcccchhhHHhcCCCC---CEE--EeeehhccCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHH
Confidence 5 3 45666654 57899988 676 89999963 4688889999988875432211 1233469999999999
Q ss_pred HHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHHHHHcCee
Q psy15447 331 ALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDMCIQAGFA 406 (457)
Q Consensus 331 ~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l~~~Gi~ 406 (457)
+|+++++. ++.++++++.++|++.|+++....++.......+.++.+.+..+... .........+.+.|+++||+
T Consensus 317 ~l~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl 395 (447)
T PRK06917 317 VLEYMEKH-NLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLL 395 (447)
T ss_pred HHHHHHHC-CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcE
Confidence 99999765 48899999999999999885422232222245678888877532110 11122466789999999999
Q ss_pred EeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 407 ITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 407 v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
+.+...-.. ....+.+|++|++.+|++|||+++++++++++++.+
T Consensus 396 ~~~~~~~~~--g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 440 (447)
T PRK06917 396 LYPAVAGQD--GKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQ 440 (447)
T ss_pred EEecccccC--CCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 976421000 112479999999999999999999999999987643
No 86
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=316.54 Aligned_cols=350 Identities=20% Similarity=0.220 Sum_probs=269.2
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeecCCccCC--C-CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFATHNYLSF--V-ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s~~~l~~--~-~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|.++.+++|.|+|+ ||++||||+++ |.+. + +||+|.+++.++++++++.+ +.+ .++...++++.+++++
T Consensus 13 ~~~~~~~~~G~~~~d~dg~~~lD~~~~-~~~~~~Gh~~p~v~~a~~~~~~~~~~~~---~~~--~~~~~~~~~~~l~~~~ 86 (400)
T PTZ00125 13 LPVVLKRGKGVFVWDVEGKKYYDFLSA-YSAVNQGHCHPKILAALINQAQKLTLTS---RAF--YNDVLGLAEKYITDLF 86 (400)
T ss_pred CCccEEeeecCEEEeCCCCEEEEcccC-HhhccCCcCCHHHHHHHHHHHHhccccc---ccc--cCHHHHHHHHHHHhCC
Confidence 367889999999995 99999999884 3222 2 48999999999999876532 222 3568899999999999
Q ss_pred CCCcEEEecccHHHHHHHHHhhc-----------CCCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCCC
Q psy15447 139 GLEETALYSFGFSTSASAIAAYV-----------KRNDAVFVDENINFAIQTGLIASRC------------KVQYFKHNN 195 (457)
Q Consensus 139 g~~~~i~~~sG~~a~~~ai~a~~-----------~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~d 195 (457)
+.+.+++++||++|++.+++... .+.++|..+..+|+.+...+...+. .+..++++|
T Consensus 87 ~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 166 (400)
T PTZ00125 87 GYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYND 166 (400)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCC
Confidence 99999999999999999998764 2345778888999998888776542 234677889
Q ss_pred HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-cc
Q psy15447 196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TE 270 (457)
Q Consensus 196 ~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~ 270 (457)
++++++.++. +++++|++||++|++|.+.| +++|+++|++||++||+||+|+. +|++|.++ .+
T Consensus 167 ~~~le~~l~~----------~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g--~g~~G~~~~~~ 234 (400)
T PTZ00125 167 VEALEKLLQD----------PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTG--LGRTGKLLAHD 234 (400)
T ss_pred HHHHHHHhCC----------CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCccchhhHHH
Confidence 9999998852 35789999999999999988 99999999999999999999852 45555543 34
Q ss_pred ccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHH
Q psy15447 271 YFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLRE 347 (457)
Q Consensus 271 ~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~ 347 (457)
++++.| |++ +++|++++ +.|++++++++++.+.......++ +.+|+.++++.++++.+++. ++.+++++
T Consensus 235 ~~~~~p---d~~--~~sK~l~~g~~~ig~v~~~~~~~~~~~~~~~~~t~--~~~~~~~~aa~~~l~~i~~~-~~~~~~~~ 306 (400)
T PTZ00125 235 HEGVKP---DIV--LLGKALSGGLYPISAVLANDDVMLVIKPGEHGSTY--GGNPLACAVAVEALEVLKEE-KLAENAQR 306 (400)
T ss_pred hcCCCC---CEE--EEcccccCCCcCcEEEEEcHHHHhhccCCCCCCCC--CcCHHHHHHHHHHHHHHHhc-CHHHHHHH
Confidence 567665 666 68899964 347899999998887643333333 35889999999999988754 46788888
Q ss_pred HHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEE
Q psy15447 348 KCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRIT 427 (457)
Q Consensus 348 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~ 427 (457)
+.+++++.|+++....+......+.+.++++.+..+.. ....++++.|+++||++.+.. .+++||+
T Consensus 307 ~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~~~-----~~~~~~~~~l~~~Gv~v~~~~---------~~~lRi~ 372 (400)
T PTZ00125 307 LGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDHSDG-----VNAWDLCLKLKENGLLAKPTH---------DNIIRFA 372 (400)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEecccEEEEEEEccCcc-----hHHHHHHHHHHHCCeEEeecC---------CCEEEEE
Confidence 89999888877311122211113457777777764211 145678999999999987643 4789999
Q ss_pred ecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 428 CNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 428 ~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
++..+|++++++++++|+++++++.
T Consensus 373 ~~~~~~~~~i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 373 PPLVITKEQLDQALEIIKKVLKSFD 397 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999988764
No 87
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=100.00 E-value=2.7e-38 Score=314.43 Aligned_cols=348 Identities=15% Similarity=0.111 Sum_probs=262.7
Q ss_pred ceeeecCCCcEEE-ECCeeeEEeecCC---ccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447 64 KYVVDQKSGYIVN-INGIPCINFATHN---YLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG 139 (457)
Q Consensus 64 ~~~i~~~~g~~~~-~~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g 139 (457)
++.+++++|+++| .||++||||.++. ++|++ ||++.+++.+++++++..... +-+++...++.++|++.++
T Consensus 28 ~~~~~~a~G~~l~d~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~~~~~~~~~~~~----~~~~~~~~~la~~l~~~~~ 102 (427)
T TIGR00508 28 VYPVESADGVELTLDDGRRLIDGMSSWWAAIHGYN-HPRLNAAAQKQIDKMSHVMFG----GFTHKPAIELCQKLVKMTP 102 (427)
T ss_pred CceEEeeeeeEEEeCCCCEEEEccchHHHhcCCCC-CHHHHHHHHHHHHhcCCcccc----ccCCHHHHHHHHHHHhhCC
Confidence 4678999999999 4999999998763 77764 899999999999986543221 1146778999999999875
Q ss_pred C--CcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe-------------EEEe--c-
Q psy15447 140 L--EETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK-------------VQYF--K- 192 (457)
Q Consensus 140 ~--~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~-------------~~~~--~- 192 (457)
. +++++++||++|++.|++... ++.++|.....+|+.+...+.+++.. .... +
T Consensus 103 ~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~ 182 (427)
T TIGR00508 103 NALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQ 182 (427)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCC
Confidence 3 588999999999999998643 24567888999999877666654421 0011 1
Q ss_pred --------CCCHHHHHHHHHhhchhcccCCCCccEEEEEecC-CCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccc
Q psy15447 193 --------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV-YMNSADICP----LKDILSLRSKYQARIFVDESVSFG 259 (457)
Q Consensus 193 --------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v-~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g 259 (457)
++|++++++.+++.. +++++|++||+ ++.+|.+.| +++|+++|++||++||+||+| .|
T Consensus 183 ~~~~~~~~~~~~~~l~~~l~~~~--------~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~-tG 253 (427)
T TIGR00508 183 NRFDEEWNEEAITPLAKLMELHS--------DEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIA-TG 253 (427)
T ss_pred ccccchhHHHHHHHHHHHHHhcC--------CcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cC
Confidence 124567777776432 46789999998 666665443 899999999999999999998 34
Q ss_pred cccCCCCc-cccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCC-c--ceecCCCcHHHHHHHHHHH
Q psy15447 260 TLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGS-G--YCFSASLPPFLAVAANKAL 332 (457)
Q Consensus 260 ~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~aaa~a~l 332 (457)
+|++|.+ ..+++++.| ||+ +++|++++ +.+.+++++++++.+..... . +..+...+|+.+++++++|
T Consensus 254 -~Gr~G~~~~~~~~~v~p---Di~--~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l 327 (427)
T TIGR00508 254 -FGRTGKLFACEHAGVVP---DIL--CVGKALTGGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASL 327 (427)
T ss_pred -CCcCCccchhhhcCCCC---CEE--EechhhhcCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHH
Confidence 5777776 457889877 777 69999952 24567888899888864321 1 1122235999999999999
Q ss_pred HHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc
Q psy15447 333 HLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH 412 (457)
Q Consensus 333 ~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~ 412 (457)
+++++.+ +.++++++.++|++.|+++...+.+. ..+..++++.+.+.++. ....+.+.|+++||++.+..
T Consensus 328 ~~l~~~~-~~~~~~~~~~~l~~~L~~l~~~~~i~-~vrg~G~~~~i~~~~~~-------~~~~~~~~l~~~Gv~~~~~~- 397 (427)
T TIGR00508 328 AILLEGE-WQKQVSAIENQLKRELSPLRKNPVVK-DVRVLGAIGVVEMYKPV-------NVEELQKKFVEQGVWIRPFG- 397 (427)
T ss_pred HHHHhCC-HHHHHHHHHHHHHHHHHHhhcCCCEE-eEeccccEEEEEECCcc-------CHHHHHHHHHHCCeEEEecC-
Confidence 9997764 68999999999999998854222232 12356888888887543 45678999999999986532
Q ss_pred CccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 413 LDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 413 ~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
+.+|++|++.+|++|||++++++++++++
T Consensus 398 ---------~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 398 ---------KLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred ---------CEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 57999999999999999999999998854
No 88
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=1.4e-38 Score=317.44 Aligned_cols=350 Identities=12% Similarity=0.102 Sum_probs=254.6
Q ss_pred eeeecCCCcEEEE--CCeeeEEeecC---CccCCCCChhhHH--HHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q psy15447 65 YVVDQKSGYIVNI--NGIPCINFATH---NYLSFVENPDIEK--CAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASF 137 (457)
Q Consensus 65 ~~i~~~~g~~~~~--~G~~~id~~s~---~~l~~~~~p~i~~--a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~ 137 (457)
+.+++++|+|+|+ ||++||||.++ ..+|++ ||+|.+ ++.+|+.+..+....+ ....++...++.++|+++
T Consensus 28 ~~i~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~-~p~v~~~~ai~~ql~~l~~~~~~~--~~~~~~~~~~la~~l~~~ 104 (443)
T PRK08297 28 LDLERSQGSYLVDARTGRRYLDMFTFFASSALGMN-HPALADDPEFRAELGRAALNKPSN--SDVYTVEMARFVDTFARV 104 (443)
T ss_pred eEEEeccCCEEEECCCCCEeeecccCHhhhcCCCC-ChHHhhHHHHHHHHHHhhhhcccc--CCcCCHHHHHHHHHHHhh
Confidence 3478999999995 89999999775 345654 899999 9999998854211111 112567888999999998
Q ss_pred c---CCCcEEEecccHHHHHHHHHhhc----------C-----CCCEEEEeCcccHHHHHHHHhcCCeEE----------
Q psy15447 138 M---GLEETALYSFGFSTSASAIAAYV----------K-----RNDAVFVDENINFAIQTGLIASRCKVQ---------- 189 (457)
Q Consensus 138 ~---g~~~~i~~~sG~~a~~~ai~a~~----------~-----~gd~v~~~~~~h~~~~~~~~~~g~~~~---------- 189 (457)
. +.++++|++||++|++.|++... + +.++|.....+|+.+..++.+++....
T Consensus 105 ~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~ 184 (443)
T PRK08297 105 LGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDW 184 (443)
T ss_pred cCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCc
Confidence 6 24688999999999999998752 1 234777888999999888877652110
Q ss_pred --------EecC-------------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHH
Q psy15447 190 --------YFKH-------------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRS 244 (457)
Q Consensus 190 --------~~~~-------------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~ 244 (457)
.++. ++++++++.+.+. ++++++||+||+++++|.+.| +++|+++|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--------~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~ 256 (443)
T PRK08297 185 PRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERH--------PHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCD 256 (443)
T ss_pred cccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhC--------CCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHH
Confidence 0010 0123344555432 267899999999999998755 899999999
Q ss_pred HcCcEEEEEcCcccccccCCCCc-cccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHh-h--CCcceecCCC
Q psy15447 245 KYQARIFVDESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRL-S--GSGYCFSASL 320 (457)
Q Consensus 245 ~~g~~li~DEa~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~-~--~~~~~~~~~~ 320 (457)
+||++||+||+++. +|++|.+ ..+++|+.| ||+ +++|+++ .||++.+++ +.+.... . ...+..+.+.
T Consensus 257 ~~g~llI~DEV~tG--fGRtG~~~a~~~~gv~P---Div--~~gK~l~-~~a~l~~~~-i~~~~~~~~~~~~~~~~T~~g 327 (443)
T PRK08297 257 EHDALLIFDEVQTG--VGLTGTAWAYQQLGVRP---DIV--AFGKKTQ-VCGIMAGRR-VDEVEDNVFAVSSRINSTWGG 327 (443)
T ss_pred HcCCEEEEechhhc--cCccchHHHHHhcCCCC---CEE--Eeccccc-ccceecchH-HHHhhhhhccCccccCCCCCc
Confidence 99999999999852 3555655 457889887 787 7999985 456666654 3222111 0 1112233346
Q ss_pred cHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHH
Q psy15447 321 PPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDM 399 (457)
Q Consensus 321 ~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 399 (457)
+|+.|++++++|+++++. ++.++++++++++++.|+++.. .+.+....++.+.++.+.+.+.. ....+++.
T Consensus 328 npl~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~~~-------~~~~~~~~ 399 (443)
T PRK08297 328 NLVDMVRARRILEVIEED-GLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPTTA-------DRDEVIRR 399 (443)
T ss_pred cHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEecCHH-------HHHHHHHH
Confidence 999999999999999765 5889999999999999987431 12221112356888888886532 45679999
Q ss_pred HHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 400 CIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 400 l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
|+++||++.+.. .+.+||+|++.+|++|+|+++++|+++++++
T Consensus 400 l~~~Gvl~~~~~---------~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 400 LWEEGVLVLPCG---------ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred HHHCCEEEecCC---------CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 999999987543 3689999999999999999999999998764
No 89
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=2.4e-38 Score=314.87 Aligned_cols=359 Identities=14% Similarity=0.159 Sum_probs=265.9
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|.+|| .|||+||||.++ ..+|++ ||+|.+|+.+|+.++.+... ....++...+|+++|++..
T Consensus 22 ~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~ql~~~~~~~~----~~~~~~~~~~la~~l~~~~ 96 (421)
T PRK09792 22 CNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHR-HPDLVAAVEQQLQQFTHTAY----QIVPYESYVTLAEKINALA 96 (421)
T ss_pred CCeeEEeccccEEEeCCCCEEEEccCchhhhcCCCC-CHHHHHHHHHHHHhccCccc----CccCCHHHHHHHHHHHHhC
Confidence 36789999999999 599999999764 345664 89999999999998643211 1125788899999999986
Q ss_pred C---CCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCCe-------------EEEecC------
Q psy15447 139 G---LEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRCK-------------VQYFKH------ 193 (457)
Q Consensus 139 g---~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~~-------------~~~~~~------ 193 (457)
+ .++++|++||++|++.|++.. +++.++|.....+|+.+...+.+++.. +..++.
T Consensus 97 p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~ 176 (421)
T PRK09792 97 PVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHG 176 (421)
T ss_pred CCCCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccc
Confidence 5 257899999999999999864 456667888899999988777765421 122222
Q ss_pred ----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC-C---hHHHHHHHHHcCcEEEEEcCcccccccCCC
Q psy15447 194 ----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC-P---LKDILSLRSKYQARIFVDESVSFGTLGSTG 265 (457)
Q Consensus 194 ----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~-~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g 265 (457)
++++.+++.+++... .+++++|++||+++++|... | +++|+++|++||++||+||+++. +|++|
T Consensus 177 ~~~~~~~~~l~~~~~~~~~------~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg--~gr~G 248 (421)
T PRK09792 177 ISTQDSLDAIERLFKSDIE------AKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSG--FARTG 248 (421)
T ss_pred ccHHHHHHHHHHHHHhccC------CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCCCC
Confidence 234677777764210 25688999999999999765 5 89999999999999999999863 34455
Q ss_pred Ccc-ccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHH
Q psy15447 266 HGV-TEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLL 342 (457)
Q Consensus 266 ~~~-~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~ 342 (457)
.++ .+++++.| ||+ |++|++|+ +.|++++++++++.+....+..+| +.+|+.|++++++++++++. ++.
T Consensus 249 ~~~a~~~~~~~p---Di~--t~gK~l~~G~pigav~~~~~i~~~~~~~~~~~T~--~gnpl~~aaa~a~l~~l~~~-~~~ 320 (421)
T PRK09792 249 KLFAMDHYADKP---DLM--TMAKSLAGGMPLSGVVGNANIMDAPAPGGLGGTY--AGNPLAVAAAHAVLNIIDKE-SLC 320 (421)
T ss_pred chhHHHhcCCCC---cEE--EeehhhcCCCceEEEEEcHHHHhccCCCCcCCCC--CCCHHHHHHHHHHHHHHHhh-hHH
Confidence 443 46777766 664 89999963 458899999998887544333334 46999999999999999765 478
Q ss_pred HHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCC
Q psy15447 343 TKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKP 422 (457)
Q Consensus 343 ~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~ 422 (457)
++++++.+++++.|+++....+........+.++++.+.++............+++.|+++||++.+.. ...+
T Consensus 321 ~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g-------~~~~ 393 (421)
T PRK09792 321 ERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCG-------AYGN 393 (421)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcceecccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeecC-------CCCC
Confidence 889999999999887743212221122344889999886542111111246789999999999985321 1258
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 423 SIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 423 ~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
.+||.|++.+|++|+++++++++++++
T Consensus 394 ~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 394 VIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred EEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998874
No 90
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=4.3e-38 Score=315.11 Aligned_cols=356 Identities=18% Similarity=0.197 Sum_probs=269.6
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC-CccCCC-CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH-NYLSFV-ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG 139 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g 139 (457)
.|+++.+++|.++| .||++||||+++ ++.+++ +||+|.+++.+++.+....+. ..+.++.+.+++++|++++|
T Consensus 18 ~~~~~~~~~g~~~~d~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~----~~~~~~~~~~l~~~l~~~~~ 93 (413)
T cd00610 18 YPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSL----GFFYNEPAVELAELLLALTP 93 (413)
T ss_pred CCceEEeeecCEEEeCCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccC----cccCCHHHHHHHHHHHHhCC
Confidence 57889999999999 499999999884 444444 699999999999976432211 11468899999999999998
Q ss_pred --CCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCC--------
Q psy15447 140 --LEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC------------KVQYFKHN-------- 194 (457)
Q Consensus 140 --~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~-------- 194 (457)
.+.+++++||++|+..+++++ .++.++|+.+..+|+....++..++. ++..++++
T Consensus 94 ~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (413)
T cd00610 94 EGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAE 173 (413)
T ss_pred CCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhh
Confidence 778899999999999999876 34445566677889988877776643 35677887
Q ss_pred ---CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCc
Q psy15447 195 ---NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHG 267 (457)
Q Consensus 195 ---d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~ 267 (457)
|++++++.+++.. +++++++++|+++++|.+.| +++|+++|++||+++|+||+|+. +|+.|.+
T Consensus 174 ~~~d~~~l~~~l~~~~--------~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g--~g~~g~~ 243 (413)
T cd00610 174 LADDLEALEEALEEHP--------EEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTG--FGRTGKM 243 (413)
T ss_pred HHHHHHHHHHHHhcCC--------CCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCcCcch
Confidence 7888888886532 46789999999999999887 99999999999999999999973 3444444
Q ss_pred -cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHH
Q psy15447 268 -VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTK 344 (457)
Q Consensus 268 -~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~ 344 (457)
..+++++.| |++ |+||++++ +.|++++++++++.+......+..+.+.+|+.++++.++++.+++ +++.++
T Consensus 244 ~~~~~~~~~~---d~~--t~sK~l~~g~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~-~~~~~~ 317 (413)
T cd00610 244 FAFEHFGVEP---DIV--TLGKGLGGGLPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE-EGLLEN 317 (413)
T ss_pred hhHhhcCCCC---CeE--EEcccccCccccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh-ccHHHH
Confidence 345677665 554 89999974 347888999988886211222233445689999999999998876 457899
Q ss_pred HHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCe
Q psy15447 345 LREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPS 423 (457)
Q Consensus 345 l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~ 423 (457)
++++.+++++.|+++....+........++++++.+...... ..+......+++.|.++||++.+.. .+.
T Consensus 318 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~---------~~~ 388 (413)
T cd00610 318 AAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG---------GNV 388 (413)
T ss_pred HHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC---------CCE
Confidence 999999999999874321122222235678888887654100 0011256679999999999998753 368
Q ss_pred EEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 424 IRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 424 lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
+|++++..+|++|+++++++|+++
T Consensus 389 lR~~~~~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 389 IRLLPPLIITEEEIDEGLDALDEA 412 (413)
T ss_pred EEEECCCcCCHHHHHHHHHHHHHh
Confidence 999999999999999999999875
No 91
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=4.9e-38 Score=314.27 Aligned_cols=363 Identities=13% Similarity=0.186 Sum_probs=260.7
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+|+| .|||+||||.++ ..+|++ ||+|.+|+.+|+.+..+.+. .+..++...+|+++|++++
T Consensus 21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~i~~ai~~q~~~~~~~~~----~~~~~~~~~~lae~L~~~~ 95 (442)
T TIGR00709 21 LPTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHN-HPNMKQKILDYLQSGLPLHT----LDLTTPLKDAFIEALLNII 95 (442)
T ss_pred CCceEEeccccEEEeCCCCEEEEccccHhhhcCCCC-CHHHHHHHHHHHHhccCccc----cccCcHHHHHHHHHHHHhC
Confidence 36789999999999 599999999875 345554 89999999999987432221 1225788899999999987
Q ss_pred CC----CcEEEe-cccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCCC---
Q psy15447 139 GL----EETALY-SFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC------------KVQYFKHNN--- 195 (457)
Q Consensus 139 g~----~~~i~~-~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~d--- 195 (457)
+. ...+|+ +||++|++.|++.. +++..+|.....+|+.+...+.+++. .+..+++++
T Consensus 96 p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (442)
T TIGR00709 96 PKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYR 175 (442)
T ss_pred CCcCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCcccc
Confidence 53 244554 89999999999854 46667888899999999888877641 122233222
Q ss_pred ----------HHH----HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcc
Q psy15447 196 ----------MQH----LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVS 257 (457)
Q Consensus 196 ----------~~~----le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~ 257 (457)
.+. +++.+.... . ..+++++|++||+++++|.+.| +++|+++|++||++||+||+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~t 250 (442)
T TIGR00709 176 CPFGIGGEAGSNASIEYFENFIEDVE----S-GVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQA 250 (442)
T ss_pred ccccCCchhHHHHHHHHHHHHHHhhc----c-CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 122 223332110 0 1256899999999999887754 8999999999999999999975
Q ss_pred -cccccCCCCc-cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHH
Q psy15447 258 -FGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALH 333 (457)
Q Consensus 258 -~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~ 333 (457)
+|+. |.+ ..+++|+.| ||+ +++|++|+ +-|+++++++ ++.+....+. .+.+.+|++|++++++|+
T Consensus 251 GfGRt---G~~~a~~~~gv~P---Div--~~gK~l~~G~Pigav~~~~~-~~~~~~~~~~--~T~~gnpla~aaa~a~L~ 319 (442)
T TIGR00709 251 GFGRS---GTMFAFEHAGIEP---DFV--VMSKAVGGGLPLAVLLIAPE-FDAWQPAGHT--GTFRGNQLAMVTGTEALN 319 (442)
T ss_pred CCCCC---CchhHHHHcCCCC---cEE--EEcccccCCcccEEEEEchH-HhccCCCcCC--CCCCcCHHHHHHHHHHHH
Confidence 5544 443 457789887 787 69999964 3477788877 4444322222 333469999999999999
Q ss_pred HHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-------HHHHHHHHHHHHHHHHcCee
Q psy15447 334 LLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-------VASKKLLQTICDMCIQAGFA 406 (457)
Q Consensus 334 ~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~~l~~~Gi~ 406 (457)
.+++. ++.+++++++++|++.|+++....++....+..+.++.+.+.++... ..+......+...|+++|++
T Consensus 320 ~i~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl 398 (442)
T TIGR00709 320 YWKDD-NLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLL 398 (442)
T ss_pred HHHhc-CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeE
Confidence 98765 48899999999999999874311222122245688888887543210 11112456788899999999
Q ss_pred EeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447 407 ITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQP 454 (457)
Q Consensus 407 v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~ 454 (457)
+.+.. ...+.+|+.|++.+|++|+++++++++++++++..+
T Consensus 399 ~~~~~-------~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~~~ 439 (442)
T TIGR00709 399 LETGG-------REGEVFRLLCPITIDQEECEEGISRFKQAVEEALAE 439 (442)
T ss_pred EeecC-------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 87543 124799999999999999999999999999876443
No 92
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=4.8e-38 Score=304.66 Aligned_cols=332 Identities=14% Similarity=0.159 Sum_probs=252.1
Q ss_pred CCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q psy15447 62 SSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASF 137 (457)
Q Consensus 62 ~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~ 137 (457)
..|..+++++|.|+|+ |||+||||.++ ..+|+ +||+|.+|+.+|+++..+.. +. ..++...+++++|+++
T Consensus 5 ~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~~~~~~--~~---~~~~~~~~la~~l~~~ 78 (364)
T PRK04013 5 RKRLRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGH-NHPEWVEEMSEQLEKLVVAG--PM---FEHEEKEEMLEELSKW 78 (364)
T ss_pred CCCccEEEeecCEEEECCCCEEEEcccChhhccCCC-CCHHHHHHHHHHHHhcCCcc--CC---cCCHHHHHHHHHHHhh
Confidence 3578899999999995 99999999775 34565 48999999999999854322 11 1478889999999999
Q ss_pred cCCCcEEEecccHHHHHHHHHhhc---CCCCEEEEeCcccHHHHHHHHhcC------------CeEEEecCCCHHHHHHH
Q psy15447 138 MGLEETALYSFGFSTSASAIAAYV---KRNDAVFVDENINFAIQTGLIASR------------CKVQYFKHNNMQHLEEL 202 (457)
Q Consensus 138 ~g~~~~i~~~sG~~a~~~ai~a~~---~~gd~v~~~~~~h~~~~~~~~~~g------------~~~~~~~~~d~~~le~~ 202 (457)
.+.+.+++++||++|++.|++... ++..+|..+..+|+.+...+.+++ ..+..++.+|++.+++.
T Consensus 79 ~~~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~ 158 (364)
T PRK04013 79 VNYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAKEA 158 (364)
T ss_pred cCCCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCCHHHHHHH
Confidence 988899999999999999998653 445677778889998877666433 22456677899888887
Q ss_pred HHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCc-cccccCCCCC
Q psy15447 203 LRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHG-VTEYFGVSTE 277 (457)
Q Consensus 203 l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~-~~~~~~~~~~ 277 (457)
+. +++++|++||+++.+|...| +++|+++|++||++||+||+++.. ++|.+ ..+++++.|
T Consensus 159 i~-----------~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~---RtG~~~a~~~~gv~P- 223 (364)
T PRK04013 159 IT-----------KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL---RTGKFLAIEHYKVEP- 223 (364)
T ss_pred hc-----------CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC---CCCchhHHHhcCCCC-
Confidence 74 35789999999998887764 899999999999999999998632 44544 457889988
Q ss_pred CccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Q psy15447 278 EVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSL 355 (457)
Q Consensus 278 ~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~ 355 (457)
||+ +++|++|. +.|+++.++++. ...+. ++.+.+|++|++++++|+.+++++ +.++.++. + ..
T Consensus 224 --Div--~~gK~lggG~P~~a~~~~~~~~----~~~~~--~T~~gnp~~~aaa~a~l~~i~~~~-l~~~~~~~---l-~~ 288 (364)
T PRK04013 224 --DIV--TMGKGIGNGVPVSLTLTNFDVE----RGKHG--STFGGNPLACKAVAVTLRILRRER-LVEKAGEK---F-IE 288 (364)
T ss_pred --CEE--EecccccCCceeEEEEeccccc----CCCcC--CCCCcCHHHHHHHHHHHHHHHhcc-HHHHHHHH---H-HH
Confidence 677 79999963 335566665541 12233 344569999999999999998764 66666654 2 22
Q ss_pred hhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447 356 LSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQ 435 (457)
Q Consensus 356 L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e 435 (457)
+.. +.+.- .+..+.++.+.+..+ ...+.+.++++|+++.+.. .+.+||.||+.+|++
T Consensus 289 l~~----~~v~~-vRG~Gl~~gve~~~~---------~~~i~~~~~~~Gll~~~~g---------~~vlr~~Ppl~it~~ 345 (364)
T PRK04013 289 IKG----ERVVT-TRGRGLMIGIVLKKP---------VGKYVEELQNRGYLVHTAG---------QRVIRLLPPLIISKD 345 (364)
T ss_pred hcc----Cccee-eeeCcEEEEEEeCCc---------HHHHHHHHHhCCcEEeeCC---------CCEEEEeCCcccCHH
Confidence 322 21111 145678888888643 3468899999999986532 478999999999999
Q ss_pred HHHHHHHHHHHHHHHhc
Q psy15447 436 DMNSLIETLCKSHDIAV 452 (457)
Q Consensus 436 di~~~~~~l~~~~~~~~ 452 (457)
|+++++++|+++++++.
T Consensus 346 ~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 346 TMEEAKSAIEGVINDIL 362 (364)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998653
No 93
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=1.3e-37 Score=310.25 Aligned_cols=358 Identities=14% Similarity=0.141 Sum_probs=263.3
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+||| .||++||||.++ ..+|+. ||+|.+|+.+|+.+..+... ....++...+++++|+++.
T Consensus 15 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~a~~~ql~~~~~~~~----~~~~~~~~~~la~~l~~~~ 89 (420)
T TIGR00700 15 LPVFAARAEGAILEDVDGNRLIDFASGIAVLNIGHS-HPRVVDAVRTQVAEFTHTCF----MVTPYEGYVALAEKLNRIA 89 (420)
T ss_pred CCeeEEeeeeeEEEeCCCCEEEECccCHHhccCCCC-CHHHHHHHHHHHHhccCccc----cccCChHHHHHHHHHHHhC
Confidence 47889999999999 599999999775 345554 89999999999998643211 1124677889999999987
Q ss_pred C---CCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC-------------eEEEecCC-----
Q psy15447 139 G---LEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC-------------KVQYFKHN----- 194 (457)
Q Consensus 139 g---~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~-------------~~~~~~~~----- 194 (457)
+ .++++|++||++|++.|++.. +++..+|.....+|+.+...+.+++. .+..++.+
T Consensus 90 p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (420)
T TIGR00700 90 PGSGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRD 169 (420)
T ss_pred CCCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccc
Confidence 5 357899999999999999854 46667888899999998887766542 11112221
Q ss_pred -----------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccc
Q psy15447 195 -----------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFG 259 (457)
Q Consensus 195 -----------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g 259 (457)
+++.+++.+.... .++.+++|++||+++.+|.+.| +++|+++|++||++||+||+++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg- 242 (420)
T TIGR00700 170 GLLDKQLSTDGELAAARAIFVIDV------GANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTG- 242 (420)
T ss_pred cccccchhHHHHHHHHHHHHHhhc------CCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccC-
Confidence 1345555553111 1267899999999999998877 89999999999999999999863
Q ss_pred cccCCCCc-cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh
Q psy15447 260 TLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK 336 (457)
Q Consensus 260 ~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~ 336 (457)
+|++|.+ ..+++++.| ||+ ++||++++ +.|++++++++++.+....+..+| +.+|+.|++++++++.++
T Consensus 243 -~gr~g~~~a~~~~~~~p---Di~--~lsK~l~~G~pig~v~~~~~i~~~~~~~~~~~T~--~~~pl~~aaa~a~l~~l~ 314 (420)
T TIGR00700 243 -FARTGAMFACEHEGPEP---DLI--TTAKSLADGLPLSGVTGRAEIMDAPAPGGLGGTY--AGNPLACAAALAVLAIIE 314 (420)
T ss_pred -CcccchhHHHhhcCCCC---CEE--EeeccccCCcceEEEEecHHHHhhcCCCCcCCCC--CcCHHHHHHHHHHHHHHH
Confidence 3444433 446678777 665 79999962 448899999998887544333344 458999999999999887
Q ss_pred hCcHHHHHHHHHHHHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc
Q psy15447 337 ANPSLLTKLREKCNTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ 415 (457)
Q Consensus 337 ~~~~~~~~l~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~ 415 (457)
+. .+.+++++..+++++.|+++.. .+.+..+ .+.+.++++.+.++.....+......+.+.|.++||++.+...
T Consensus 315 ~~-~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v-rg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~--- 389 (420)
T TIGR00700 315 SE-GLIERARQIGRLVTDRLTTLKAVDPRIGDV-RGLGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGM--- 389 (420)
T ss_pred hc-cHHHHHHHHHHHHHHHHHHHHhhCCCEEEe-eccceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCC---
Confidence 65 4788888999999988877432 2223222 3558888887743211111122456788888999999987542
Q ss_pred ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 416 EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 416 ~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
..+++||+|++.+|++++++++++|+++++
T Consensus 390 ----f~~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 390 ----FGNIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred ----CCCEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 137999999999999999999999998874
No 94
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=100.00 E-value=1.5e-37 Score=311.24 Aligned_cols=381 Identities=19% Similarity=0.230 Sum_probs=276.0
Q ss_pred hhhHHHHHcccCCCCCCCcccccc-ccCCceeeecCCCcEEE-ECCeeeEEeecCC---ccCCCCChhhHHHHHHHHHhc
Q psy15447 36 TINVDALINNWTPEPIVSKAEKFK-DVSSKYVVDQKSGYIVN-INGIPCINFATHN---YLSFVENPDIEKCAIDCIDKN 110 (457)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~-~~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~~ 110 (457)
++++.+..+++.|.+...+..... ....|+++++++|+||| .||++||||.++. .+|+ +||+|.+|+++|+.+.
T Consensus 2 s~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~ 80 (423)
T TIGR00713 2 SENLFEEAKQVFPGGVNSPVRAFKSVGPTPFFVARGKGAYLYDVDGNEYIDYVLSWGPLILGH-AHPRVVEAVKEALERG 80 (423)
T ss_pred cHHHHHHHHhhCCCCCCCcccccccCCCCCeeEEeccCCEEEeCCCCEEEEccccccccccCC-CCHHHHHHHHHHHHhC
Confidence 457778888999988875443321 22358899999999999 5999999998753 3455 4899999999999873
Q ss_pred CCCCCCCCCcccChHHHHHHHHHHHhhcC-CCcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhc--
Q psy15447 111 GVGSCGPRGFYGTNVVHLDLENDIASFMG-LEETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIAS-- 184 (457)
Q Consensus 111 ~~~~~~~~~~~g~~~~~~~l~~~la~~~g-~~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~-- 184 (457)
. .+ +..++...+|+++|+++++ .+++++++||++|++.|++. ++++..+|..+..+|+.......++
T Consensus 81 ~-~~------~~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~ 153 (423)
T TIGR00713 81 T-SY------GAPTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGS 153 (423)
T ss_pred C-cC------CCCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccC
Confidence 2 11 2256778999999999875 46788999999999999985 3456667777888888644332211
Q ss_pred -----------------CCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHH
Q psy15447 185 -----------------RCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLR 243 (457)
Q Consensus 185 -----------------g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~ 243 (457)
+.....++++|++++++.+++.. +++++|++||+++++|.+.| +++|+++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~--------~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~ 225 (423)
T TIGR00713 154 GAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYG--------EEIAGVIVEPVAGNMGVVPPKPEFLAGLRALT 225 (423)
T ss_pred cccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcC--------CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHH
Confidence 01245677889999999987532 46789999999999998877 78999999
Q ss_pred HHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcce-ecCCC
Q psy15447 244 SKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYC-FSASL 320 (457)
Q Consensus 244 ~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~-~~~~~ 320 (457)
++||++||+||+|+..++|. .+..+++++.| |++ ||||++|. +.|++++++++++.+......+. .+.+.
T Consensus 226 ~~~~~llI~DEv~~g~r~g~--~~~~~~~~~~p---Di~--t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~~~~T~~~ 298 (423)
T TIGR00713 226 EEYGSLLIFDEVMTGFRVAL--GGAQEYFGVEP---DLT--TLGKIIGGGLPVGAFGGRREIMERLAPEGPVYQAGTLSG 298 (423)
T ss_pred HHhCCEEEEEccccccccCc--chhHHHhCCCc---chh--hhhhhhcCCCceeeeeEHHHHHHhhCcCCCeeeccCCCC
Confidence 99999999999996445543 33456788877 665 89999973 46999999999988864221112 23356
Q ss_pred cHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch------HHHHHHHH
Q psy15447 321 PPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE------VASKKLLQ 394 (457)
Q Consensus 321 ~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~ 394 (457)
+|+.|++++++|+.+++.+ +.++++++.+++++.|.++....++.......+.++.+.+..+... ..+.....
T Consensus 299 ~~~~~aaa~a~l~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~ 377 (423)
T TIGR00713 299 NPLAMAAGLATLKLLDEEG-VYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFA 377 (423)
T ss_pred CHHHHHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHH
Confidence 9999999999999987653 6778888888887777542111343332234577777766532100 00112345
Q ss_pred HHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 395 TICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 395 ~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
.+++.|+++||++.+..+ +.+|++++ +|++|+++++++|+++++++
T Consensus 378 ~~~~~l~~~Gv~v~~~~~---------~~~~l~~~--~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 378 KFFHEMLDKGVFLPPSQF---------EACFLSAA--HTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred HHHHHHHHCCeEEecCCc---------cceeeECC--CCHHHHHHHHHHHHHHHhhC
Confidence 788899999999875432 45788876 79999999999999988653
No 95
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=4e-37 Score=308.98 Aligned_cols=385 Identities=14% Similarity=0.159 Sum_probs=271.4
Q ss_pred ChhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhc
Q psy15447 35 HTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKN 110 (457)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~ 110 (457)
++++..+...++.+.+..+ ..|+++++++|+||| .|||+||||.++ ..+|+ +||+|.+|+.+|+++.
T Consensus 16 ~s~~~~~~~~~~~~~~~~~--------~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~ 86 (451)
T PRK06918 16 KAASLLERRQNIVPKGVSN--------GIPTFAQSANGALVTDVDGNQYIDFAGAIGTINVGH-SHPKVKEALHKQVDQY 86 (451)
T ss_pred CHHHHHHHHHHhhcccccc--------CCCceEEeccccEEEeCCCCEEEEcCCchhhcCCCC-CCHHHHHHHHHHHHhc
Confidence 3445555555554433321 136789999999999 599999999775 33455 4899999999999985
Q ss_pred CCCCCCCCCcccChHHHHHHHHHHHhhcCC---CcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhc
Q psy15447 111 GVGSCGPRGFYGTNVVHLDLENDIASFMGL---EETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIAS 184 (457)
Q Consensus 111 ~~~~~~~~~~~g~~~~~~~l~~~la~~~g~---~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~ 184 (457)
.+... . ...++...+|+++|+++++. ++++|++||++|++.|++.. .++.++|.....||+.+..++.++
T Consensus 87 ~~~~~--~--~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~ 162 (451)
T PRK06918 87 IHTGF--N--VMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMT 162 (451)
T ss_pred cCccc--c--ccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhc
Confidence 43221 1 12468889999999998862 57899999999999999854 567788889999999988887765
Q ss_pred CCe-------------EEEecCCC-----------------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC
Q psy15447 185 RCK-------------VQYFKHNN-----------------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC 234 (457)
Q Consensus 185 g~~-------------~~~~~~~d-----------------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~ 234 (457)
+.. +..+++++ .+.+++.+.... .++++++|++||+++.+|.+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~iAavi~EPi~g~gG~~~ 236 (451)
T PRK06918 163 SKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEV------APETIAAVVMEPVQGEGGFIV 236 (451)
T ss_pred CCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhc------CCCceEEEEECcccCCCCCcc
Confidence 421 12222221 112333332110 125789999999999888866
Q ss_pred C----hHHHHHHHHHcCcEEEEEcCcc-cccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHH
Q psy15447 235 P----LKDILSLRSKYQARIFVDESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHH 307 (457)
Q Consensus 235 ~----l~~i~~l~~~~g~~li~DEa~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~ 307 (457)
| +++|+++|++||++||+||+++ +|+.|. .+..+++++.| |++ |+||++++ +-|++++++++++.+
T Consensus 237 ~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~--~~a~~~~~v~p---Di~--t~sK~l~~G~pig~v~~~~~i~~~~ 309 (451)
T PRK06918 237 PSKKFVQEVRNICSEHGILFVADEIQTGFARTGK--YFAIEHFDVVP---DLI--TVSKSLGAGVPISGVIGRKEIMDES 309 (451)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccCcCccCc--eehhHhcCCCC---CEE--eeehhhcCCCccEEEEEcHHHHhcc
Confidence 5 8899999999999999999975 444432 22346677766 655 89999962 348899999988877
Q ss_pred HhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcch
Q psy15447 308 RLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDE 386 (457)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~ 386 (457)
....+.. +.+.+|+.++++.++++.+++. .+.+++++.++++.+.|+++.. .+.+.-+ .+.+.++.+.+..+...
T Consensus 310 ~~~~~~~--T~~g~~l~~aaa~a~l~~i~~~-~~~~~~~~~g~~l~~~l~~l~~~~~~~~~v-rg~G~~~~~~~~~~~~~ 385 (451)
T PRK06918 310 APGELGG--TYAGSPLGCAAALAVLDIIEKE-NLNDRAIELGKVVMNRFEEMKNKYNCIGDV-RGLGAMCAFELVQDRKT 385 (451)
T ss_pred CCCCcCc--CCCcCHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHhhCCCceee-ccceeEEEEEEccCCCc
Confidence 5433333 3346999999999999988654 4778888999999998877421 1111112 34466666655321100
Q ss_pred -HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCCCC
Q psy15447 387 -VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQPLN 456 (457)
Q Consensus 387 -~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~~~ 456 (457)
..+......+.+.|.++||++.+... ..+.+||+|++.+|+++|++++++|+++++++..+.|
T Consensus 386 ~~~~~~~~~~l~~~~~~~Gvlv~~~~~-------~~~~lrl~p~l~~t~~~id~~l~~l~~~l~~~~~~~~ 449 (451)
T PRK06918 386 KEPDKTLTANICKEANKRGLLLLSAGT-------YGNVIRVLMPLVITDEQLEEGLTIIEESLQACYEKAN 449 (451)
T ss_pred CCCcHHHHHHHHHHHHHCCeEEeecCC-------CCCEEEEECCCccCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 11122456788899999999977531 1378999999999999999999999999988766544
No 96
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=3e-38 Score=313.34 Aligned_cols=345 Identities=13% Similarity=0.121 Sum_probs=248.3
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHH--HHhcCCCCCCCCCcccChHHHHHHHHHHHh
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDC--IDKNGVGSCGPRGFYGTNVVHLDLENDIAS 136 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~--l~~~~~~~~~~~~~~g~~~~~~~l~~~la~ 136 (457)
.|..+++++|+||| .||++||||.++ ..+|+ +||+|.+|+.+| ...+.+.+ . ..++...+++++|++
T Consensus 40 ~p~~~~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh-~~p~i~~Ai~~q~~~~~l~~~~---~---~~~~~~~~la~~l~~ 112 (464)
T TIGR00699 40 FLADYEKSRGNYLVDVDGNRLLDLYSQISSIPIGY-NNPALLKAAQSPEMATTLINRP---A---LGNFPSKDWAKILKE 112 (464)
T ss_pred cceEEEecccCEEEeCCCCEEEEccCCHhhhcCCC-CCHHHHHHHHHHHHHHhhcccc---c---CCcHHHHHHHHHHHH
Confidence 47889999999999 599999999875 34455 489999999985 33332211 1 135567778888754
Q ss_pred ----hcC--CCcEEEecccHHHHHHHHHhhcC------------------------------CCCEEEEeCcccHHHHHH
Q psy15447 137 ----FMG--LEETALYSFGFSTSASAIAAYVK------------------------------RNDAVFVDENINFAIQTG 180 (457)
Q Consensus 137 ----~~g--~~~~i~~~sG~~a~~~ai~a~~~------------------------------~gd~v~~~~~~h~~~~~~ 180 (457)
+.+ .++++|++||++|++.|++.... +.++|.....+|+.+..+
T Consensus 113 ~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~a 192 (464)
T TIGR00699 113 GILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGS 192 (464)
T ss_pred hHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHH
Confidence 543 46889999999999999986521 125778899999999888
Q ss_pred HHhcCCeE-----------EEecC-------------------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447 181 LIASRCKV-----------QYFKH-------------------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS 230 (457)
Q Consensus 181 ~~~~g~~~-----------~~~~~-------------------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~ 230 (457)
+.+++... ..++. ++++++++++++.. +.+++||+||+++.+
T Consensus 193 ls~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~--------~~iAAvI~EPv~g~~ 264 (464)
T TIGR00699 193 LSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWH--------KPVAAIIVEPIQSEG 264 (464)
T ss_pred HHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcC--------CcEEEEEEeCCCCCC
Confidence 87765211 11111 12455666665432 468999999999999
Q ss_pred CCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCc-cccccCCCCCCccEEEecCcccccCcccEEEecHHHHH
Q psy15447 231 ADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIE 305 (457)
Q Consensus 231 G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~ 305 (457)
|.+.| +++|+++|++||++||+||++. | +|++|.+ ..+++|+. +.+||+ +++|++|. ||++++++.+ .
T Consensus 265 G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~t-G-fGrtG~~fa~e~~gv~-~~PDi~--t~gK~lg~-gG~~~~~~~~-~ 337 (464)
T TIGR00699 265 GDNHASPDFFRKLRDITKKHNVAFIVDEVQT-G-VGATGKFWAHEHWNLD-DPPDMV--TFSKKFQT-AGYFFHDPAF-R 337 (464)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeeeee-C-CCCCcchhHHHhcCCC-CCCCEE--Eehhhhcc-CCccccchhc-c
Confidence 99987 9999999999999999999984 2 3666665 45888986 233786 89999963 3555444321 1
Q ss_pred HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccc-cC-CeEEe-ccCCCCeEEEEecC
Q psy15447 306 HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKV-TQ-RFLVQ-GHRDTPLKYLYLQK 382 (457)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~-~~-~~~~~-~~~~~~~~~i~~~~ 382 (457)
......+. .+.+.+|++|++++++|+.+++. .+.+++++++++|++.|+++.. .+ -+..+ +...+.++.+.+.+
T Consensus 338 ~~~~~~~~--~T~~gnp~~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~ 414 (464)
T TIGR00699 338 PNKPYRQF--NTWMGDPSRALILREIIQEIKRK-DLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPD 414 (464)
T ss_pred CCCCcccc--cCCCCCHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCC
Confidence 10111122 23346999999999999999765 4889999999999999987431 22 12111 12568888888754
Q ss_pred CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 383 SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 383 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
.. .+..+.+.|+++|+++...+ .+.+||.|++.+|++||++++++|++++
T Consensus 415 ~~-------~~~~i~~~~~~~Gvl~~~~g---------~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 415 EA-------KRDKLLKKARNNGVNIGGCG---------VKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred HH-------HHHHHHHHHHHCCcEEecCC---------CCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 32 46789999999999986532 4789999999999999999999998763
No 97
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=7.3e-38 Score=338.96 Aligned_cols=363 Identities=14% Similarity=0.125 Sum_probs=271.1
Q ss_pred CCceeeecCCCcEEE-ECCeeeEEeecC-CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447 62 SSKYVVDQKSGYIVN-INGIPCINFATH-NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG 139 (457)
Q Consensus 62 ~~~~~i~~~~g~~~~-~~G~~~id~~s~-~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g 139 (457)
..|+++++++|+||| .|||+||||.++ ..+|+ +||+|.+|+.+|+.+..... + ..++...+++++|++.++
T Consensus 605 ~~p~~i~~g~G~~l~D~dG~~ylD~~~g~~~lGH-~hp~v~~Ai~~q~~~l~~~~---~---~~~~~~~~lAe~L~~~~p 677 (1013)
T PRK06148 605 SDPIKFVRGWGVWLIDNRGRAYLDCFNNVCHVGH-AHPRVVAAAARQAARLNTNT---R---YLHDAIVAYAERLTATLP 677 (1013)
T ss_pred CCCceEEEeeecEEEECCCCEEEEcccChhhcCC-CCHHHHHHHHHHHhhcCCcC---C---cCCHHHHHHHHHHHHhCC
Confidence 357899999999999 599999999876 23454 48999999999999853221 1 247888999999999875
Q ss_pred --CCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC------------eE--------EEecCC
Q psy15447 140 --LEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC------------KV--------QYFKHN 194 (457)
Q Consensus 140 --~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~------------~~--------~~~~~~ 194 (457)
.+.++|++||++|++.|++.. +++.++|..+..+|+.+...+.+++. .+ ...+.+
T Consensus 678 ~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 757 (1013)
T PRK06148 678 DGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPER 757 (1013)
T ss_pred CCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCC
Confidence 467899999999999999754 56778889999999998776655431 11 111222
Q ss_pred --CH-------HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCc-cccc
Q psy15447 195 --NM-------QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESV-SFGT 260 (457)
Q Consensus 195 --d~-------~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~-~~g~ 260 (457)
+. +++++.++.... .++.+++||+||+++.+|.+.| +++++++|++||+++|+||++ ++|+
T Consensus 758 ~~~~~~~~~~~~~l~~~i~~~~~-----~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGR 832 (1013)
T PRK06148 758 WPDAEHGRRFAESVAEQIAAMAA-----KGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGR 832 (1013)
T ss_pred CChhhhHHHHHHHHHHHHHhhhc-----cCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCC
Confidence 21 345555543211 1256899999999999998877 899999999999999999997 5655
Q ss_pred ccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC
Q psy15447 261 LGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN 338 (457)
Q Consensus 261 ~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~ 338 (457)
+|.. .+..+++|+.| ||+ +++|++|. +-|++++++++++.+.... .+..|.+.+|++|++++++|++++++
T Consensus 833 tG~~-~~a~e~~gv~P---Div--t~gK~lggG~Plgav~~~~ei~~~~~~g~-~~~~Tf~gnpla~aaa~a~L~~i~~e 905 (1013)
T PRK06148 833 VGSH-WWAFETQGVVP---DIV--TMGKPIGNGHPMGAVVTTREIADSFDNGM-EYFNTFGGNPVSCAIGLAVLDIIEDE 905 (1013)
T ss_pred CCCc-chhhhhcCCCc---cee--eecccccCCcceEEEEEcHHHHhhccCCC-ccccCCCCCHHHHHHHHHHHHHHhhc
Confidence 5431 23568899988 787 89999963 4477889999998875432 23344456999999999999999765
Q ss_pred cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCcccc
Q psy15447 339 PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLDQEA 417 (457)
Q Consensus 339 ~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~ 417 (457)
++.+++++++++|++.|+++....++.......+.++.+.+..+... +.+......+++.|+++||++.+.+
T Consensus 906 -~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g------ 978 (1013)
T PRK06148 906 -DLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTEG------ 978 (1013)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEeccC------
Confidence 58899999999999999875321222111245678888887643211 1222245679999999999997643
Q ss_pred CCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 418 KKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 418 ~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
...+.+||.|++.+|++|+|+++++|+++++++
T Consensus 979 -~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 979 -PHDNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred -CCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 124899999999999999999999999999765
No 98
>KOG1401|consensus
Probab=100.00 E-value=2.1e-37 Score=286.29 Aligned_cols=380 Identities=19% Similarity=0.185 Sum_probs=275.3
Q ss_pred ChhhHHHHHcccCCCCCCCccccc-cccCCceeeecCCCcEEEE-CCeeeEEeecCCc---cCCCCChhhHHHHHHHHHh
Q psy15447 35 HTINVDALINNWTPEPIVSKAEKF-KDVSSKYVVDQKSGYIVNI-NGIPCINFATHNY---LSFVENPDIEKCAIDCIDK 109 (457)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~g~~~~~-~G~~~id~~s~~~---l~~~~~p~i~~a~~~~l~~ 109 (457)
.+++.........+..+.++.... .....|.++++++|+++++ +|++||||++..+ +|++ ||++.+++.+|+.+
T Consensus 9 ~~~~~~~~~~~~~~~i~~~~~~~~~t~a~~pv~~~~gkg~kl~D~~g~EyiD~~ssw~~~~~Gha-npev~ral~~q~~k 87 (433)
T KOG1401|consen 9 KSEDASNAASVSMPGIVEEKTRIVSTYARYPVVIESGKGSKLFDPDGKEYIDFTSSWAVTILGHA-NPEVARALAEQAKK 87 (433)
T ss_pred cCcccccchhhccccccccceEEeeecCCCceeeecceeeeeecCCcceeeeeccceeccccCCC-CHHHHHHHHHHHhh
Confidence 344555555555555555554443 3445788899999999995 9999999998644 4544 89999999999999
Q ss_pred cCCCCCCCCCcccChHHHHHHHHHHHhhc---CCCcEEEecccHHHHHHHHHhhcC----C-----CCEEEEeCcccHHH
Q psy15447 110 NGVGSCGPRGFYGTNVVHLDLENDIASFM---GLEETALYSFGFSTSASAIAAYVK----R-----NDAVFVDENINFAI 177 (457)
Q Consensus 110 ~~~~~~~~~~~~g~~~~~~~l~~~la~~~---g~~~~i~~~sG~~a~~~ai~a~~~----~-----gd~v~~~~~~h~~~ 177 (457)
.++...++ .+.+ ..++++.|.+.. ..++++|.+||++||+.|++...+ + -.+|.....+|+.+
T Consensus 88 ~~hs~~~~----~t~e-av~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~t 162 (433)
T KOG1401|consen 88 LGHSSNGY----FTLE-AVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRT 162 (433)
T ss_pred heeccCcc----ccHH-HHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcc
Confidence 88754433 3555 888999999998 577899999999999999976432 1 14788899999999
Q ss_pred HHHHHhcC------------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHH
Q psy15447 178 QTGLIASR------------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILS 241 (457)
Q Consensus 178 ~~~~~~~g------------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~ 241 (457)
..++...+ ..+....+||+.++++.++.+. +.+++||+||+++.+|.+++ +..|+.
T Consensus 163 lgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~--------~~IaAVIvEPiqGaGG~~p~~peFl~~L~k 234 (433)
T KOG1401|consen 163 LGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHK--------GEIAAVIVEPIQGAGGIIPADPEFLIGLRK 234 (433)
T ss_pred hhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCC--------CceEEEEEecccCCCCcccCCHHHHHHHHH
Confidence 98888654 2345567889999999999865 56899999999998888765 789999
Q ss_pred HHHHcCcEEEEEcCcc-cccccCCCCccccccCCCCCCccEEEecCccccc--CcccEEEecHHHHHHHHhhCC---cce
Q psy15447 242 LRSKYQARIFVDESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG--SVGGFCVGSSYIIEHHRLSGS---GYC 315 (457)
Q Consensus 242 l~~~~g~~li~DEa~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg--~~gG~v~~~~~~~~~~~~~~~---~~~ 315 (457)
+|+++|++||+||++. +|++|. .|..+++++.| ||. |++|.+| .+-|++.+++++++.+....+ +.+
T Consensus 235 ~C~~~~vl~I~DEV~tG~gR~g~--~~a~e~~~~~P---DI~--t~aK~L~gGlPigA~~v~~kV~~~i~~~~~l~hg~T 307 (433)
T KOG1401|consen 235 ECDDNGVLLIFDEVQTGLGRLGY--GWAQEYFGVTP---DIT--TVAKPLGGGLPIGATGVRDKVAEMISPGDHLYHGGT 307 (433)
T ss_pred HHhhcCceEEeehhhhCccccch--HHHHHHhCcCC---cce--eehhhccCCceeEEEeehHHHHhhcCCCCccccCcc
Confidence 9999999999999874 566654 45679999988 677 8999995 345888999999999977665 445
Q ss_pred ecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec-cCCCCeEEEEecCCcchHHHHHHHH
Q psy15447 316 FSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG-HRDTPLKYLYLQKSDDEVASKKLLQ 394 (457)
Q Consensus 316 ~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~ 394 (457)
|+ .+|++|.++..+++.+.. ++..+++.+..+.|++.|.+...-..-.+.+ ...+.++.+....+. .
T Consensus 308 f~--gnpLacsa~~~~l~~l~~-~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~---------~ 375 (433)
T KOG1401|consen 308 FS--GNPLACSAGIKVLDELKD-PETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPV---------Y 375 (433)
T ss_pred cC--CChhhhhHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeech---------h
Confidence 54 499999999999998864 5688999999999988886621111222222 233445555444332 2
Q ss_pred HHHHHHHHcCeeEeccccCccccCCCCCeEEEEe----cCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 395 TICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC----NISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 395 ~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~----~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
.+.+..+++|.++.+... ......+||.| +..+|+|.++++++++.+.++++.
T Consensus 376 ~~~d~~~~~~ll~~~~~~-----~~~~~gv~i~P~~~l~~~~~~E~i~~~l~i~~~~l~~~~ 432 (433)
T KOG1401|consen 376 KFADAAREQGLLILTLGK-----GLLEEGVRIAPIYLLTVEHTPEVIQRLLTILEKVLSALN 432 (433)
T ss_pred hhhhhhhhhhHHHHHHhc-----ccccceEEEeccccccccCcHHHHHHHHHHHHHHHHHhc
Confidence 233333333333322221 01123455555 334569999999999999988764
No 99
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=3.7e-36 Score=299.37 Aligned_cols=343 Identities=14% Similarity=0.176 Sum_probs=260.8
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|.++| .||++||||.++ +++|+ +||++.+++.+++++..... . .+..+...+++++|+++.
T Consensus 21 ~~~~~~~~~G~~~~d~dg~~~iD~~~g~~~~~lG~-~~p~v~~a~~~~~~~~~~~~---~--~~~~~~~~~la~~l~~~~ 94 (396)
T PRK02627 21 LPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGH-CHPKLVEAIQEQAAKLIHTS---N--LYYIEPQEELAEKLVELS 94 (396)
T ss_pred CCceEEeeeeCEEEeCCCCEEEECCccHHhccCCC-CCHHHHHHHHHHHhhccccc---c--ccCCHHHHHHHHHHHhhc
Confidence 47889999999999 599999999874 56676 48999999999998753221 1 124788999999999999
Q ss_pred CCCcEEEecccHHHHHHHHHhhcC---C-----CCEEEEeCcccHHHHHHHHhcCCe------------EEEecCCCHHH
Q psy15447 139 GLEETALYSFGFSTSASAIAAYVK---R-----NDAVFVDENINFAIQTGLIASRCK------------VQYFKHNNMQH 198 (457)
Q Consensus 139 g~~~~i~~~sG~~a~~~ai~a~~~---~-----gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~d~~~ 198 (457)
+.+++++++||++|+..+++++.. + .+++..+..+|+....+....+.. +..++++|+++
T Consensus 95 ~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 174 (396)
T PRK02627 95 GMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEA 174 (396)
T ss_pred CCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHH
Confidence 999999999999999999986542 2 345667777888877766655422 34567789999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC-CC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCc-cccccC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI-CP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHG-VTEYFG 273 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i-~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~-~~~~~~ 273 (457)
+++.+. +++++|++||+++++|.. .+ +++|+++|++||++||+||+|+. +|++|.+ ..+.++
T Consensus 175 l~~~i~-----------~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g--~g~~g~~~~~~~~~ 241 (396)
T PRK02627 175 LKAAIT-----------DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTG--MGRTGKLFAYQHYG 241 (396)
T ss_pred HHHhcC-----------CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcC--CCccCceeeehhcC
Confidence 998873 356899999999998854 33 89999999999999999999872 3444443 334567
Q ss_pred CCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q psy15447 274 VSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNT 351 (457)
Q Consensus 274 ~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~ 351 (457)
+.| |++ ||||++|+ +.|++++++++++.+.......++ +.+++.++++.++++.+++. +..++++++.++
T Consensus 242 ~~p---di~--t~sK~~~~G~rig~~~~~~~~~~~~~~~~~~~t~--~~~~~~~~aa~~~l~~~~~~-~~~~~~~~~~~~ 313 (396)
T PRK02627 242 IEP---DIM--TLAKGLGGGVPIGAVLAKEKVADVFTPGDHGSTF--GGNPLACAAALAVIEIIEEE-GLLENAAEVGEY 313 (396)
T ss_pred CCC---CEE--EEcchhhCCcccEEEEEcHHHHhccCCCCCCCCC--CCCHHHHHHHHHHHHHHhhc-cHHHHHHHHHHH
Confidence 765 555 79999973 348899999988877543333333 45999999999999988654 477888888888
Q ss_pred HHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecC
Q psy15447 352 MHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNI 430 (457)
Q Consensus 352 l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~ 430 (457)
+++.|.++.. .+.+... ++.+.++++.+.. ...++++.|+++||++.+.. .+++|++|++
T Consensus 314 ~~~~l~~~~~~~~~~~~~-~~~g~~~~i~~~~---------~~~~~~~~l~~~Gv~v~~~~---------~~~lRi~~~~ 374 (396)
T PRK02627 314 LRAKLRELLEKYPGIKEV-RGLGLMIGIELDR---------PAAEIVKKALEKGLLINVTG---------DNVLRLLPPL 374 (396)
T ss_pred HHHHHHHHHHhCCCeeee-ccCcEEEEEEecC---------cHHHHHHHHHHCCeEEeecC---------CCEEEEECCc
Confidence 8888876321 1122221 3456778887732 34679999999999998753 3689999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHh
Q psy15447 431 SHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 431 ~~t~edi~~~~~~l~~~~~~~ 451 (457)
.+|++++++++++|+++++++
T Consensus 375 ~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 375 IISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred ccCHHHHHHHHHHHHHHHHhh
Confidence 999999999999999988754
No 100
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=5.2e-37 Score=305.88 Aligned_cols=345 Identities=13% Similarity=0.138 Sum_probs=245.8
Q ss_pred eeecCCCcEEEE--CCeeeEEeecC---CccCCCCChhhH--HHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 66 VVDQKSGYIVNI--NGIPCINFATH---NYLSFVENPDIE--KCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 66 ~i~~~~g~~~~~--~G~~~id~~s~---~~l~~~~~p~i~--~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.+++++|.|+|+ |||+||||.++ ..+|+ +||+|. +|+.+|+.+..+....+. ....+...++.++|++..
T Consensus 22 ~~~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh-~~p~v~~~~ai~~q~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~ 98 (431)
T TIGR03251 22 DLDRSRGSVLVDARDGRRYLDMFSFFASMALGM-NHPALVDDLAFRARLGAAAVNKPSNS--DVYTVAMARFVDTFARVL 98 (431)
T ss_pred EEEeccCCEEEECCCCCChhhcccChhhcCCCC-CChhhhHHHHHHHHHHHhhhcccccC--CCCCHHHHHHHHHHHHhc
Confidence 369999999995 89999999775 23455 489999 999999987532111111 124677788888888875
Q ss_pred ---CCCcEEEecccHHHHHHHHHhhc----------C-----CCCEEEEeCcccHHHHHHHHhcCCeEEE----------
Q psy15447 139 ---GLEETALYSFGFSTSASAIAAYV----------K-----RNDAVFVDENINFAIQTGLIASRCKVQY---------- 190 (457)
Q Consensus 139 ---g~~~~i~~~sG~~a~~~ai~a~~----------~-----~gd~v~~~~~~h~~~~~~~~~~g~~~~~---------- 190 (457)
+.++++|++||++|++.|++... + +.++|.....+|+.+..++.+++.....
T Consensus 99 ~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~ 178 (431)
T TIGR03251 99 GDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWP 178 (431)
T ss_pred CCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCc
Confidence 24678999999999999998653 1 2347778889999998887776521000
Q ss_pred ---e-----cC-------------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHH
Q psy15447 191 ---F-----KH-------------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSK 245 (457)
Q Consensus 191 ---~-----~~-------------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~ 245 (457)
. +. ++++++++.+... ++++++|++||+++.+|.+.| +++|+++|++
T Consensus 179 ~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--------~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~ 250 (431)
T TIGR03251 179 RIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAER--------PHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDE 250 (431)
T ss_pred cCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhC--------CCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHH
Confidence 1 10 1123334444432 267899999999999998864 8999999999
Q ss_pred cCcEEEEEcCcccccccCCCCc-cccccCCCCCCccEEEecCcccccCcccEEEecH--HHHHHHHhhCCcceecCCCcH
Q psy15447 246 YQARIFVDESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSS--YIIEHHRLSGSGYCFSASLPP 322 (457)
Q Consensus 246 ~g~~li~DEa~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~--~~~~~~~~~~~~~~~~~~~~~ 322 (457)
||++||+||+++ | +|++|.+ ..+++|+.| ||+ +++|++ ..+|++.+++ ++.+........+..+.+.+|
T Consensus 251 ~g~llI~DEV~t-G-~GrtG~~~a~~~~gv~P---Di~--~~gK~~-~~~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnp 322 (431)
T TIGR03251 251 HDALLIFDEVQT-G-VGLTGTAWAYQQLGVQP---DIV--AFGKKT-QVCGIMAGRRVDEVADNVFAVPSRLNSTWGGNL 322 (431)
T ss_pred cCCEEEEecchh-c-cCccchHHHHHhcCCCC---CEE--EecccC-ccceEEecchHHHhhhhcccCccccCCCCCCCH
Confidence 999999999987 2 3556655 457889887 787 699987 3456666654 222211110111122234699
Q ss_pred HHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHH
Q psy15447 323 FLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCI 401 (457)
Q Consensus 323 ~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~ 401 (457)
+.|++++++|+++++. .+.++++++.+++++.|+++.. .+++....+..+.++.+.+.... ....+.+.|+
T Consensus 323 l~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~-------~~~~~~~~l~ 394 (431)
T TIGR03251 323 VDMVRATRILEIIEEE-RLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTA-------DRDEVIRQLY 394 (431)
T ss_pred HHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCHH-------HHHHHHHHHH
Confidence 9999999999999765 4788999999999999877421 12132222345788888886432 4567999999
Q ss_pred HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 402 QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 402 ~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
++||++.+.. .+.+||+|++.+|++|+|+++++|++
T Consensus 395 ~~Gvl~~~~g---------~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 395 REGVLLLGCG---------ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred hCCeEEecCC---------CCeEEEECCccCCHHHHHHHHHHHHh
Confidence 9999986543 36899999999999999999999976
No 101
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=3.2e-36 Score=297.08 Aligned_cols=338 Identities=14% Similarity=0.161 Sum_probs=253.0
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC-CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH-NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL 140 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~-~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~ 140 (457)
.|.++++++|+|+| .||++||||.|+ ++++++.||++.+|+.+++.+++..+. . ...+...++++.+... .
T Consensus 11 ~~~~~~~~~G~~l~d~dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~~~~~--~---~~~~~~~~la~~l~~~--~ 83 (375)
T PRK04260 11 AAIEFVKAEGNYLIDTDGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIWHSPN--L---YLNSLQEEVAQKLIGD--K 83 (375)
T ss_pred CCceEEEeeeCEEEeCCCCEEEECCCCcccccCCCCHHHHHHHHHHHHhcCcccC--c---cCCHHHHHHHHHHhcC--c
Confidence 36789999999999 599999999886 577888899999999999988643221 1 1233344444433321 2
Q ss_pred C-cEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCCCHHHHHHHHH
Q psy15447 141 E-ETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHNNMQHLEELLR 204 (457)
Q Consensus 141 ~-~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~d~~~le~~l~ 204 (457)
+ .+++++||++|+..|++.. .++.++|..+..+|+++..++..++.+ +...+++|++++++.+.
T Consensus 84 ~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~ 163 (375)
T PRK04260 84 DYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVN 163 (375)
T ss_pred CCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcC
Confidence 2 3578899999999998875 456667778899999988887665432 22335789999988774
Q ss_pred hhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccccCCCCCCc
Q psy15447 205 QQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYFGVSTEEV 279 (457)
Q Consensus 205 ~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~~~~~~~~ 279 (457)
+.+++|++|++++++|.+.| +++++++|++||+++|+||+|+ | +|++|.++ .+.+++.|
T Consensus 164 -----------~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~-g-~g~~g~~~~~~~~~~~p--- 227 (375)
T PRK04260 164 -----------KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQT-G-MGRTGKLYAFEHYGIEP--- 227 (375)
T ss_pred -----------CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCcccchhhhHhhCCCC---
Confidence 24589999999999998866 8999999999999999999985 3 56666553 35678877
Q ss_pred cEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhh
Q psy15447 280 DMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLS 357 (457)
Q Consensus 280 Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~ 357 (457)
|++ ||||++++ +.|++++++++++.+.......+| +.+|+.++++.++++.++.. +++++++++.+++++.|.
T Consensus 228 di~--t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~--~~~~~~~~aa~a~l~~~~~~-~~~~~~~~~~~~~~~~l~ 302 (375)
T PRK04260 228 DIF--TLAKGLANGVPVGAMLAKSSLGGAFGYGSHGSTF--GGNKLSMAAASATLDIMLTA-GFLEQALENGNYLQEQLQ 302 (375)
T ss_pred CEE--EecccccCCcceEEEEEcHHHHhhcCCCCCCCCC--CcCHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHH
Confidence 555 89999963 569999999988877543333333 45899999999999988654 577888888888888776
Q ss_pred cccccCC-eEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHH
Q psy15447 358 QHKVTQR-FLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQD 436 (457)
Q Consensus 358 ~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ed 436 (457)
+.....+ +... +..+.++++.+.. ...++.++|.++||++.+.. .+.+|++++..+|++|
T Consensus 303 ~~~~~~~~~~~~-~~~g~~~~~~~~~---------~~~~~~~~l~~~Gi~v~~~~---------~~~lR~~~~~~~t~~~ 363 (375)
T PRK04260 303 KALQDKETVTTV-RGLGYMIGIETTA---------DLSQLVEAARDKGLIVLTAG---------TNVIRLLPPLTLTKEE 363 (375)
T ss_pred HHHhhCCCeeEE-eccceEEEEEecC---------cHHHHHHHHHhCCCEEecCC---------CCEEEEcCCCccCHHH
Confidence 5321122 2222 3467888888743 34578999999999987542 3789999999999999
Q ss_pred HHHHHHHHHHH
Q psy15447 437 MNSLIETLCKS 447 (457)
Q Consensus 437 i~~~~~~l~~~ 447 (457)
+++++++|+++
T Consensus 364 i~~~l~~l~~~ 374 (375)
T PRK04260 364 IEQGIAILSEV 374 (375)
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 102
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=3.5e-36 Score=299.98 Aligned_cols=376 Identities=13% Similarity=0.163 Sum_probs=258.0
Q ss_pred hhHHHHHcccCCCCCCCcccccc--ccCCceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhc
Q psy15447 37 INVDALINNWTPEPIVSKAEKFK--DVSSKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKN 110 (457)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~ 110 (457)
.++.+.+.+..|.+..++..... +...|+++++++|+|+| .|||+||||.++ ..+|++ ||+|.+|+.+|+++.
T Consensus 2 ~~l~~~a~~~~p~g~~~~~~~~~~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~q~~~~ 80 (431)
T PRK06209 2 QLLQSRLHALIPGGAHTYAKGDDQYPELAPGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGHA-YPPVVEAVREALQDG 80 (431)
T ss_pred HHHHHHHHhhCCCCCCCCccccccCCCCCCeEEEeccCCEEEeCCCCEEEEccccccchhcCCC-CHHHHHHHHHHHHhC
Confidence 35666777778888876555433 22468899999999999 599999999765 345554 899999999999974
Q ss_pred CCCCCCCCCcccChHHHHHHHHHHHhhcC-CCcEEEecccHHHHHHHHHhh---cCCCCEEEE-eCcccHH---HHHHHH
Q psy15447 111 GVGSCGPRGFYGTNVVHLDLENDIASFMG-LEETALYSFGFSTSASAIAAY---VKRNDAVFV-DENINFA---IQTGLI 182 (457)
Q Consensus 111 ~~~~~~~~~~~g~~~~~~~l~~~la~~~g-~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~-~~~~h~~---~~~~~~ 182 (457)
.. +........+|+++|+++++ .++++|++||++|++.|++.. +++..++.. ...+|+. +.....
T Consensus 81 ~~-------~~~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~ 153 (431)
T PRK06209 81 CN-------FTRPSAIELDAAESFLELIDGADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTP 153 (431)
T ss_pred cC-------CCCCCHHHHHHHHHHHHhCCccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCC
Confidence 31 11234455678999999874 578899999999999999854 355444444 3344431 110000
Q ss_pred hc-C------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcC
Q psy15447 183 AS-R------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDES 255 (457)
Q Consensus 183 ~~-g------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa 255 (457)
.+ + ..+..++++|++++++.+++.. +++++|++||++++.+...++++|+++|++||++||+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--------~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv 225 (431)
T PRK06209 154 MSAGIPASVSALTVTFRYNDIASLEALFEDHP--------GRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEM 225 (431)
T ss_pred CCCCCChhHhccccccCCCCHHHHHHHHHhCC--------CCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 11 1 1245678999999999997532 4678999999997644444499999999999999999999
Q ss_pred cccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHH--HHh--hCCcceecC--CCcHHHHHH
Q psy15447 256 VSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEH--HRL--SGSGYCFSA--SLPPFLAVA 327 (457)
Q Consensus 256 ~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~--~~~--~~~~~~~~~--~~~~~~~aa 327 (457)
+. |. +.++.++.+++++.| ||+ +++|++|+ ++|++++++++++. +.. ....+.+++ +.+|+.|++
T Consensus 226 ~t-G~-~~~~~g~~~~~gv~P---Di~--t~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aa 298 (431)
T PRK06209 226 IT-GF-RWHMRGAQKLYGIVP---DLS--CFGKALGNGFAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAA 298 (431)
T ss_pred cc-cC-CcCcchhhHHhCCCc---cee--eehhhhcCCcccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHH
Confidence 84 32 334455666789877 675 89999974 67889999999886 311 122333333 358899999
Q ss_pred HHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEec-CCcchHHHHHHHHHHHHHHHHcCee
Q psy15447 328 ANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ-KSDDEVASKKLLQTICDMCIQAGFA 406 (457)
Q Consensus 328 a~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~l~~~Gi~ 406 (457)
++++|++++++ .+.++++++.+++++.|+++....++....+..+..+.+.+. ..............+.+.|+++|++
T Consensus 299 a~a~l~~i~~~-~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~ 377 (431)
T PRK06209 299 AIATMAIYRDE-DVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRRGVL 377 (431)
T ss_pred HHHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHHCCcc
Confidence 99999999766 488999999999999987632112222111112223333221 1110000111234688889999997
Q ss_pred EeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 407 ITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 407 v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+.+ ++++..||++||++++++++++++++.
T Consensus 378 ~p~----------------l~is~~ht~~dId~~l~~l~~~l~~~~ 407 (431)
T PRK06209 378 MPS----------------LVVSYAHGDADIERTIDAVHGALGVYR 407 (431)
T ss_pred ccc----------------ccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 521 244568999999999999999998773
No 103
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=7.4e-36 Score=312.12 Aligned_cols=386 Identities=11% Similarity=0.041 Sum_probs=264.1
Q ss_pred hHHHHHcccCCCCCCCccccccc-cCCceeeecCCCc----EEE-ECCe----eeEEeecCC-ccCCC--CChhhHHHHH
Q psy15447 38 NVDALINNWTPEPIVSKAEKFKD-VSSKYVVDQKSGY----IVN-INGI----PCINFATHN-YLSFV--ENPDIEKCAI 104 (457)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~g~----~~~-~~G~----~~id~~s~~-~l~~~--~~p~i~~a~~ 104 (457)
..+++.++-...-|||..+.... ...+.+|++++|. |++ .||+ +|+|+.++. ..+++ +||+|.+|+.
T Consensus 313 ~~~~~~~~a~~~iw~Pftq~~~~~~~~~~vi~~a~G~~~~~~~~d~~G~~~~~~ylD~~sg~w~~~lG~h~~p~I~~Ai~ 392 (817)
T PLN02974 313 RLQSMPKEAGEVLWWPFTQHALVPRDSVTVIDSRCGEDFSVYKPKTNSTCSIVQQFDACASWWTQGPDPTLQPELARAVA 392 (817)
T ss_pred HHHHHHHHHhhhccCCcccccccCCCCceEEEeeecCceeEEEECCCCCcccceEEEcchhHHHhCCCcCCCHHHHHHHH
Confidence 33444444434444443333222 2357889999998 888 4898 999998763 23333 4899999999
Q ss_pred HHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC---CCcEEEecccHHHHHHHHHhhc--------------------
Q psy15447 105 DCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG---LEETALYSFGFSTSASAIAAYV-------------------- 161 (457)
Q Consensus 105 ~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~ai~a~~-------------------- 161 (457)
+|+.++++... ...++++..+|+++|++..+ .++++|++||++|++.||+...
T Consensus 393 ~Qa~rl~hv~~----~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~ 468 (817)
T PLN02974 393 YAAGRYGHVMF----PENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGG 468 (817)
T ss_pred HHHhhCCcccc----CccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccc
Confidence 99999875432 12368999999999999775 3578899999999999998542
Q ss_pred --CCCCEEEEeCcccHHHHHHHHhcCCe--------E------EEecC----------------C--C------------
Q psy15447 162 --KRNDAVFVDENINFAIQTGLIASRCK--------V------QYFKH----------------N--N------------ 195 (457)
Q Consensus 162 --~~gd~v~~~~~~h~~~~~~~~~~g~~--------~------~~~~~----------------~--d------------ 195 (457)
++.++|.....||+.+..++.+++.. . .+++. . +
T Consensus 469 ~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 548 (817)
T PLN02974 469 DLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESR 548 (817)
T ss_pred cCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccc
Confidence 13347888999999999888877521 0 01100 0 0
Q ss_pred -----------------HHHHHHHHHhhchhcccCCCCccEEEEEecC-CCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447 196 -----------------MQHLEELLRQQDERDTLNSKVTKKFIIVEGV-YMNSADICP----LKDILSLRSKYQARIFVD 253 (457)
Q Consensus 196 -----------------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v-~~~~G~i~~----l~~i~~l~~~~g~~li~D 253 (457)
.+.+++.|++... ...++++++||+||+ ++.+|.+.| +++|+++|++||++||+|
T Consensus 549 ~~~f~~~r~~~~~~~~~~~~le~~l~~~~~---~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~D 625 (817)
T PLN02974 549 DEVFDKTRDSTPLAKAYRSYIEQQLDEYEA---SAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFD 625 (817)
T ss_pred cccccccccchhhhHHHHHHHHHHHHhhcc---ccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Confidence 1234444442110 011257899999996 788888765 899999999999999999
Q ss_pred cCcc-cccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhh----CCcceecCCCcHHHH
Q psy15447 254 ESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLS----GSGYCFSASLPPFLA 325 (457)
Q Consensus 254 Ea~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 325 (457)
|+++ ||++|. .+..+++|+.| ||+ +++|++++ +-|++++++++.+.+... ...+.+|.+.||++|
T Consensus 626 EV~TGfGRtG~--~fa~e~~gv~P---DIi--~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~c 698 (817)
T PLN02974 626 EVFTGLWRLGV--ESAWELLGCKP---DIA--CYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGC 698 (817)
T ss_pred ecccCCCcccc--hhhHHhcCCCC---CEE--eecccccCCCCccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHH
Confidence 9874 555543 33468899988 787 89999952 357788999999887421 111233445699999
Q ss_pred HHHHHHHHHHhhCc---HHHHHHHHHHHHHHHHh-hcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHH
Q psy15447 326 VAANKALHLLKANP---SLLTKLREKCNTMHSLL-SQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMC 400 (457)
Q Consensus 326 aaa~a~l~~~~~~~---~~~~~l~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l 400 (457)
|+++++|+++++.+ .+.++.+++.+++.+.| +.+...+.+.-+ ...+.++.+.+.++... ......+..+.+.+
T Consensus 699 Aaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~V-Rg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~ 777 (817)
T PLN02974 699 AAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERV-VSLGTVLALELDAEGSGSGYSSLYARSVVRRL 777 (817)
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE-EeeeeEEEEEEecCCcccccchHHHHHHHHHH
Confidence 99999999998753 34444455555555555 222112322222 34578888888654211 11112456788889
Q ss_pred H-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 401 I-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 401 ~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
+ ++|+++++. .+.+++++|+.+++++++++++++++.+
T Consensus 778 ~~~~Gl~~r~~----------Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 778 RREDGIYARPL----------GNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred HHhCCEEEEec----------CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 9 999999764 2789999999999999999999998765
No 104
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=2.1e-34 Score=287.78 Aligned_cols=360 Identities=15% Similarity=0.135 Sum_probs=262.9
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+++| .||++||||.++ ..+|++ ||++.+++.++++++.+... . ...++...+|+++|++..
T Consensus 23 ~p~~~~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~-~~~i~~a~~~~~~~~~~~~~--~--~~~~~~~~~la~~l~~~~ 97 (425)
T PRK08088 23 HPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHL-HPKVVAAVEAQLKKLSHTCF--Q--VLAYEPYLELCEKMNQKV 97 (425)
T ss_pred CCceEEeeeeCEEEeCCCCEEEEcCCchhhcCCCCC-CHHHHHHHHHHHhhCCCccc--c--ccCCHHHHHHHHHHHHhC
Confidence 37889999999999 599999999774 345664 89999999999998653211 1 113566779999999987
Q ss_pred CC---CcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhcCCeE-------------EE--ec--CCC
Q psy15447 139 GL---EETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIASRCKV-------------QY--FK--HNN 195 (457)
Q Consensus 139 g~---~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~g~~~-------------~~--~~--~~d 195 (457)
+. +++++.+||++|++.|++. +++++++|.+...+|+.+.....+++... .. ++ .++
T Consensus 98 ~~~~~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 177 (425)
T PRK08088 98 PGDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHG 177 (425)
T ss_pred CCCCCCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccC
Confidence 63 5788999999999999875 45678888899999999887776654210 11 11 111
Q ss_pred ------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCC
Q psy15447 196 ------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTG 265 (457)
Q Consensus 196 ------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g 265 (457)
++++++.++.... ++.+++|++||++++.|.+.+ +++|+++|++||+++|+||+|+. +|++|
T Consensus 178 ~~~~~~~~~l~~~l~~~~~------~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g--~g~~g 249 (425)
T PRK08088 178 VSEDDAIASIERIFKNDAA------PEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTG--AGRTG 249 (425)
T ss_pred ccHHHHHHHHHHHHHhccC------CCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--CCcCc
Confidence 4567777752110 256889999999999888776 89999999999999999999873 45555
Q ss_pred Cc-cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHH
Q psy15447 266 HG-VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLL 342 (457)
Q Consensus 266 ~~-~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~ 342 (457)
.+ ..+++++.| || .||||++++ +.|++++++++++.+...... ++.+.+|+.++++.+.|+..+.. +..
T Consensus 250 ~~~~~~~~~~~p---di--~s~sK~l~~G~rig~v~~~~~~~~~~~~~~~~--~t~~~~~~~~~a~~~~l~~~~~~-~~~ 321 (425)
T PRK08088 250 TLFAMEQMGVAA---DL--TTFAKSIAGGFPLAGVTGRAEVMDAIAPGGLG--GTYAGNPIACAAALAVLKVFEQE-NLL 321 (425)
T ss_pred chhHHhhcCCCC---CE--EEEeccccCCCcceeeEecHHHHhhcCCCCCC--CCCCcCHHHHHHHHHHHHHHHhc-CHH
Confidence 44 234566655 54 599999963 348899999999888654433 34446999999999999988654 478
Q ss_pred HHHHHHHHHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCccccCCC
Q psy15447 343 TKLREKCNTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQ 420 (457)
Q Consensus 343 ~~l~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~ 420 (457)
+++++..+++++.|.++.. .+.+..+ .+.+.++++.+..+.+. .+......++.+.|.++||++.+... .
T Consensus 322 ~~~~~~~~~~~~~l~~l~~~~~~~~~v-~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~-------~ 393 (425)
T PRK08088 322 QKANALGEKLKDGLLAIAEKHPEIGDV-RGLGAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGP-------Y 393 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEEE-eccceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCC-------C
Confidence 8888888888888876421 1222222 34488899988432110 11122567899999999988765321 1
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 421 KPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 421 ~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
.+.+|++|+..+|++||++.+++|++++...
T Consensus 394 ~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 394 YNVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred CCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 4789999999999999999999999988754
No 105
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=100.00 E-value=1.6e-34 Score=285.89 Aligned_cols=339 Identities=17% Similarity=0.222 Sum_probs=253.3
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeec---CCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFAT---HNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s---~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|.++++++|.++| .||++||||++ ++++|+ ++|.+.+++.+++.++... ++. ...+.+.+|++++++++
T Consensus 9 ~~~~~~~~~g~~~~~~~g~~~id~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~---~~~--~~~~~~~~l~~~la~~~ 82 (379)
T TIGR00707 9 LPVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGH-AHPKLVEALKEQLEKLVHV---SNL--YYTEPQEELAEKLVEHS 82 (379)
T ss_pred CCccEEEeecCEEEeCCCCEEEEcCcchhhccCCC-CCHHHHHHHHHHHhhcccc---ccc--cCCHHHHHHHHHHHhhC
Confidence 57889999999999 59999999998 578887 5899999999999986432 111 24678999999999999
Q ss_pred CCCcEEEecccHHHHHHHHHhh---cC----CCCEEEE-eCcccHHHHHHHHhcC------------CeEEEecCCCHHH
Q psy15447 139 GLEETALYSFGFSTSASAIAAY---VK----RNDAVFV-DENINFAIQTGLIASR------------CKVQYFKHNNMQH 198 (457)
Q Consensus 139 g~~~~i~~~sG~~a~~~ai~a~---~~----~gd~v~~-~~~~h~~~~~~~~~~g------------~~~~~~~~~d~~~ 198 (457)
|.+++++++||++|+..+++++ +. ++|.|++ +..+|+....+....+ .....++++|+++
T Consensus 83 g~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 162 (379)
T TIGR00707 83 GADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIES 162 (379)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHH
Confidence 9999999999999999998865 23 2566555 4456665544433322 1234566789999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC-C---hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccccC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC-P---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYFG 273 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~-~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~~ 273 (457)
+++.+.+ ++++|+++|+++++|... + +++|.++|++||+++|+||+|+. +|..|.+. ....+
T Consensus 163 l~~~~~~-----------~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~--~~~~g~~~~~~~~~ 229 (379)
T TIGR00707 163 LKKAIDD-----------ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTG--IGRTGKFFAYEHYG 229 (379)
T ss_pred HHHHhhh-----------CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCccchhhhHHhcC
Confidence 9988753 346888899988888653 3 88999999999999999999962 34444433 23456
Q ss_pred CCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q psy15447 274 VSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNT 351 (457)
Q Consensus 274 ~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~ 351 (457)
+.| |++ |+||+++. +.|++++++++++.+........+ +.+++.++++.++|+.++. .+..+++++++++
T Consensus 230 ~~~---d~~--t~sK~~~~G~riG~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~aa~aaL~~~~~-~~~~~~~~~~~~~ 301 (379)
T TIGR00707 230 IEP---DII--TLAKGLGGGVPIGATLAKEEVAEAFTPGDHGSTF--GGNPLACAAALAVLEVIEK-ERLLENVKEKGDY 301 (379)
T ss_pred CCC---CEE--EEcccccCCcccEEEEEcHHHHhhhcCCCCCCCC--CCCHHHHHHHHHHHHHHHh-hhHHHHHHHHHHH
Confidence 554 554 79999972 348999999999888654333344 3588999999999988764 3578899999999
Q ss_pred HHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCC
Q psy15447 352 MHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNIS 431 (457)
Q Consensus 352 l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~ 431 (457)
+++.|++.....++.. .+..+.++++.++.+ ..++.+.|.++||.+.+.. .+++|++++..
T Consensus 302 ~~~~l~~~~~~~~~~~-~~~~g~~~~~~~~~~---------~~~~~~~l~~~Gv~v~~~~---------~~~lRi~~~~~ 362 (379)
T TIGR00707 302 FKERLEELGKNYPNKE-VRGKGLMLGIELEAP---------CKDIVKKALEKGLLVNCAG---------PKVLRFLPPLI 362 (379)
T ss_pred HHHHHHHHHhhCCCCc-cccCceEEEEEecCc---------HHHHHHHHHHCCcEEeeCC---------CCEEEEECCCc
Confidence 9998876321112211 123466777776542 3578889999999998643 37899999999
Q ss_pred CCHHHHHHHHHHHHHH
Q psy15447 432 HTEQDMNSLIETLCKS 447 (457)
Q Consensus 432 ~t~edi~~~~~~l~~~ 447 (457)
+|++++++++++|+++
T Consensus 363 ~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 363 ITKEEIDEAVSALEEA 378 (379)
T ss_pred CCHHHHHHHHHHHHHh
Confidence 9999999999999875
No 106
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=1.7e-33 Score=272.42 Aligned_cols=309 Identities=13% Similarity=0.185 Sum_probs=234.8
Q ss_pred CCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC--CcEEEecccHHHHHHHHHhhcCCCC
Q psy15447 88 HNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL--EETALYSFGFSTSASAIAAYVKRND 165 (457)
Q Consensus 88 ~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~ai~a~~~~gd 165 (457)
++|||+.+||.++++..+.+++|+ |+.+.+.+|++++|+++|. +.++++++|++|+..++.+++++||
T Consensus 27 ~~ylgl~~~~~~~~~~~~~~~~~~----------g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd 96 (346)
T TIGR03576 27 YDLTGLAGGFKIDEEDLELLETYV----------GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGR 96 (346)
T ss_pred cccccCCCChhHHHHHHHHHHHhc----------CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCC
Confidence 589999999999999999999984 4579999999999999998 7899999999999999999999999
Q ss_pred EEEE---eCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC---CChHHH
Q psy15447 166 AVFV---DENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI---CPLKDI 239 (457)
Q Consensus 166 ~v~~---~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i---~~l~~i 239 (457)
.|++ +.++|.++..++++.|+++. .++++++++ .. +++++|++++ .+++|.+ .+|++|
T Consensus 97 ~Vli~~~d~p~~~s~~~~~~l~ga~~~--~~~~l~~l~----~~---------~~~~lIiitg-~s~~G~v~~~~~L~~i 160 (346)
T TIGR03576 97 KVVHYLPEKPAHPSIPRSCKLAGAEYF--ESDELSELK----KI---------DGTSLVVITG-STMDLKVVSEEDLKRV 160 (346)
T ss_pred EEEECCCCCCCchhHHHHHHHcCCEEe--ccCCHHHHh----hC---------cCceEEEEEC-CCCCCcccCHHHHHHH
Confidence 9885 46799999999999998763 345666532 11 2345666665 5789998 569999
Q ss_pred HHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEecHHHHHHHHhhCCcceecC
Q psy15447 240 LSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGSSYIIEHHRLSGSGYCFSA 318 (457)
Q Consensus 240 ~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~~~~~~~~~~~~~~~~~~~ 318 (457)
.++|++||+++++||+|+.|..+..+.+....++ .|++++||||++ |..|||+++++++++.++....++.++
T Consensus 161 ~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~-----~divv~s~SKalaG~r~G~v~~~~~li~~l~~~~~~~~~s- 234 (346)
T TIGR03576 161 IKQAKSKEAIVLVDDASGARVRRLYGQPPALDLG-----ADLVVTSTDKLMDGPRGGLLAGRKELVDKIKSVGEQFGLE- 234 (346)
T ss_pred HHHHHHcCCEEEEECCccccccccCCCCCHHHcC-----CcEEEeccchhccccceEEEEeCHHHHHHHHHhhcCcccC-
Confidence 9999999999999999998876644444333333 378899999999 778999999999999998877777665
Q ss_pred CCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHH
Q psy15447 319 SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICD 398 (457)
Q Consensus 319 ~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 398 (457)
.+++.++++.++|+.+.. +.+++.++++.+.+.+.+++ .+ +. ++...++++.+.... ......+
T Consensus 235 -~~~~~~~aa~~aL~~~~~-~~~~~~l~~r~~~~~~~l~~----~~--~~-~~~~~f~~~~~~~~~-------~~~~~~~ 298 (346)
T TIGR03576 235 -AQAPLLAAVVRALEEFEL-SRIRDAFKRKEEVYLRLFDK----LN--VE-RTPTGFVIKGVEEEK-------LIEIGLD 298 (346)
T ss_pred -ccHHHHHHHHHHHhhccH-HHHHHHHHHHHHHHHHHHHh----CC--CC-cCCCeEEEEeCCCCC-------HHHHHHH
Confidence 467788888899876543 35678888888888887765 22 22 223446666664321 1233455
Q ss_pred HHHHcCeeEeccccCccccCCCCCeEEEEecCCC-CHHHHHHHHHHHHHHH
Q psy15447 399 MCIQAGFAITCPSHLDQEAKKQKPSIRITCNISH-TEQDMNSLIETLCKSH 448 (457)
Q Consensus 399 ~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~-t~edi~~~~~~l~~~~ 448 (457)
.|.++||.+++...+ +..++++||++.... ++.++++++++|++.+
T Consensus 299 ll~~~gV~v~~~~~f----~~~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 299 LLRNYGIITITAVGM----PGASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred HHHhCCEEEeCCccc----CCCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 666789999986431 123679999997311 1227999999998754
No 107
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=100.00 E-value=1.3e-32 Score=270.60 Aligned_cols=328 Identities=11% Similarity=0.080 Sum_probs=244.0
Q ss_pred hhhHHHHHHHHHhcCCCCCCCCCcccCh-----HHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeC
Q psy15447 97 PDIEKCAIDCIDKNGVGSCGPRGFYGTN-----VVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDE 171 (457)
Q Consensus 97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~-----~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~ 171 (457)
-.+.+++.+++++||.++++++...|+. +...++++.+|+++|.+.++++++|++++..++.+++++||.|+++.
T Consensus 18 g~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~ 97 (370)
T TIGR02539 18 GVLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHALCKEGDWVVLDG 97 (370)
T ss_pred CCCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHhhCCCCEEEECC
Confidence 4588999999999999887776655543 46778888899999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHH
Q psy15447 172 NINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS 244 (457)
Q Consensus 172 ~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~ 244 (457)
+.|.+.+.+++..|+++..++++ |++++++.+++.... . ..++++|+++++++++|.+.|+++|.++|+
T Consensus 98 ~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~---~-~~~~~lv~~~~p~~~~G~~~~l~~i~~la~ 173 (370)
T TIGR02539 98 LAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDE---S-GKPPVLALLTHVDGEYGNLPDAGKVAKVCR 173 (370)
T ss_pred cccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhc---c-CCCcEEEEEECCCCCCccccCHHHHHHHHH
Confidence 99999988899999999999886 899999988642210 0 024568889999999999999999999999
Q ss_pred HcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc--cEEEecHHHHHHHHhhCCcceecC----
Q psy15447 245 KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG--GFCVGSSYIIEHHRLSGSGYCFSA---- 318 (457)
Q Consensus 245 ~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g--G~v~~~~~~~~~~~~~~~~~~~~~---- 318 (457)
+||+++|+||+|++|.++..+. ..++|++++|++|++|+.| ||+++++++++.++....++.++.
T Consensus 174 ~~~~~livDea~~~g~~~~~~~---------~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~ 244 (370)
T TIGR02539 174 EKGVPLLLNCAYTVGRMPVSAK---------EIGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELL 244 (370)
T ss_pred HcCCeEEEECccccCCcCCCHH---------HcCCCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccCCccceeeee
Confidence 9999999999999875443221 1235899999999998666 999999999998876554443321
Q ss_pred --CCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEe--ccCCCCeEEEEecCCcch-HHHHHHH
Q psy15447 319 --SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQ--GHRDTPLKYLYLQKSDDE-VASKKLL 393 (457)
Q Consensus 319 --~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~-~~~~~~~ 393 (457)
+.....++++.++++...+.-+...+..++.+++++.|++ .|+++. .++.++++.+.++..... ..+....
T Consensus 245 ~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~ 320 (370)
T TIGR02539 245 GCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELED----IGFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRG 320 (370)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----CCcEEEccCCCcCceEEEECCchhHHhhhhcccc
Confidence 1122234455556654322212233445556789999998 677753 245677777765421000 0001134
Q ss_pred HHHHHHHHHcCee-EeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 394 QTICDMCIQAGFA-ITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 394 ~~~~~~l~~~Gi~-v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
..+.+.|.++||. +++. ..+++|+++. .+|++|+++++++|+++++++
T Consensus 321 ~~~~~~L~e~GI~~ir~~---------~~~~iRis~~-~~t~e~i~~l~~~L~~~~~~~ 369 (370)
T TIGR02539 321 YFLYEELKKRGIHGIRSG---------QTKYFKLSVY-GLTKEQVEYVVDSFEEIVEEY 369 (370)
T ss_pred HHHHHHHHhCCCccccCC---------cceEEEEEec-CCCHHHHHHHHHHHHHHHHhc
Confidence 5689999999997 4421 1468999984 689999999999999987753
No 108
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=4.2e-33 Score=269.35 Aligned_cols=294 Identities=19% Similarity=0.226 Sum_probs=219.6
Q ss_pred eeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc--C
Q psy15447 66 VVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM--G 139 (457)
Q Consensus 66 ~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~--g 139 (457)
+|++++|.|+|+ ||++|+||.++ ..+|++ ||++.+++.+++.+....+. ....++...+|.++|.+.+ +
T Consensus 1 ~i~~a~G~~l~d~dG~~~lD~~~~~~~~~lGh~-~p~i~~ai~~~~~~~~~~~~----~~~~~~~~~~la~~L~~~~p~~ 75 (339)
T PF00202_consen 1 FIERAEGAYLWDVDGREYLDFMSGYGSVNLGHN-HPEIAEAIAEQANKLNYVSF----SGFTHPEAAELAEKLAELFPGG 75 (339)
T ss_dssp EEEEEEBTEEEETTSEEEEESSHHHHTTTT-BT--HHHHHHHHHHHHHCSSCST----TTSEEHHHHHHHHHHHHHSSTT
T ss_pred CeEEeecCEEEECCCCEEEECCCCccceecCCC-ccccchhHHHHhhhcccccc----cceeccchhhhhhhhhhccccc
Confidence 478999999995 99999999763 455664 89999999999998654321 1236788999999999999 5
Q ss_pred CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcC------------CeEEEecCCCHHH
Q psy15447 140 LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASR------------CKVQYFKHNNMQH 198 (457)
Q Consensus 140 ~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g------------~~~~~~~~~d~~~ 198 (457)
.+++++.+||++|++.|++... ++..++.....+|+.+...+.+++ ..+..+|.+++..
T Consensus 76 ~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 155 (339)
T PF00202_consen 76 LDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAA 155 (339)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHH
T ss_pred cceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccch
Confidence 6688999999999999998655 566677788899998887777654 2346677777666
Q ss_pred ----------HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcc-cccccC
Q psy15447 199 ----------LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVS-FGTLGS 263 (457)
Q Consensus 199 ----------le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~-~g~~g~ 263 (457)
+++.+.+.. .+.+++||+||+++.+|.+.| +++|+++|++||+++|+||+++ +|++|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~-------~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~ 228 (339)
T PF00202_consen 156 DEEEQACLNALEELIAALN-------ADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGK 228 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHH-------GGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSS
T ss_pred hhhHHHHHHHHHHHHHhhc-------CCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCC
Confidence 444443332 257899999999998887754 8999999999999999999985 545543
Q ss_pred CCCccccccCCCCCCccEEEecCccccc--CcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHH
Q psy15447 264 TGHGVTEYFGVSTEEVDMIIGSLEHALG--SVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSL 341 (457)
Q Consensus 264 ~g~~~~~~~~~~~~~~Di~~~s~sK~lg--~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~ 341 (457)
.+..+++|+.| ||+ +++|+++ .+.|++++++++.+.+....++.+| +.+|+.|++++++|+.+++.+ +
T Consensus 229 --~~a~~~~gv~P---Div--~~gK~l~gG~p~sav~~~~~i~~~~~~~~~~~T~--~g~p~~~aaa~~~l~~~~~~~-~ 298 (339)
T PF00202_consen 229 --FFASEHYGVDP---DIV--TFGKGLGGGLPISAVLGSEEIMEAFQPGSHGSTF--GGNPLSCAAALATLEILEEED-L 298 (339)
T ss_dssp --SSGHHHHTSSS---SEE--EEEGGGGTTSSEEEEEEEHHHHTTSCTTSSTCTT--TT-HHHHHHHHHHHHHHHHTT-H
T ss_pred --ccceecccccC---ccc--ccccchhhhhhcccccccchhhcccccccccccc--ccchHhhhhhhhHHHhhccHH-H
Confidence 23458899988 787 7899995 3447789999998877554444444 459999999999999998764 7
Q ss_pred HHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEec
Q psy15447 342 LTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ 381 (457)
Q Consensus 342 ~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~ 381 (457)
.++++++.++|++.|+++....++....+..+.++.+.+.
T Consensus 299 ~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~~ie~~ 338 (339)
T PF00202_consen 299 LERVRELGERLREGLRELAARYPLIGEVRGIGLMIGIELV 338 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEETTEEEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeCeEEEEEEE
Confidence 8999999999999998755331222222455777777654
No 109
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=7.4e-32 Score=267.93 Aligned_cols=336 Identities=14% Similarity=0.137 Sum_probs=246.5
Q ss_pred eeEE-eecCCccCCCCChhhHHHHHHHH-HhcCCCCCCCCCcccChHHHHHHHH----HHHhhcCCCcEEE-ecccHHHH
Q psy15447 81 PCIN-FATHNYLSFVENPDIEKCAIDCI-DKNGVGSCGPRGFYGTNVVHLDLEN----DIASFMGLEETAL-YSFGFSTS 153 (457)
Q Consensus 81 ~~id-~~s~~~l~~~~~p~i~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l~~----~la~~~g~~~~i~-~~sG~~a~ 153 (457)
+.|+ ++|+||+ ||++++++...+ .+|+.+++++|.+.| .+.+.+||+ ++++++|.+.+++ ++||+.|+
T Consensus 29 ~~~~l~~sen~~----~p~v~~a~~~~~~~~~~~g~~gsr~~~G-~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~ 103 (416)
T PRK13034 29 DHLELIASENFT----SPAVMEAQGSVLTNKYAEGYPGKRYYGG-CEFVDEVEALAIERAKQLFGCDYANVQPHSGSQAN 103 (416)
T ss_pred cCeeecccccCC----CHHHHHHhcchhhcCCCCCCCCCcccCC-ChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHH
Confidence 4455 5677885 899999999995 999999999999888 688999999 9999999999965 58999999
Q ss_pred HHHHHhhcCCCCEEEEeCcccHH-HHHHHHhc--CCeE--EEecC------CCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFA-IQTGLIAS--RCKV--QYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFII 222 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~-~~~~~~~~--g~~~--~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi 222 (457)
..++.+++++||.|+++...|++ ...+++.. +... ..+++ .|++++++.++.. ++++|+
T Consensus 104 ~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~----------~~klVi 173 (416)
T PRK13034 104 GAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEH----------KPKLII 173 (416)
T ss_pred HHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhc----------CCeEEE
Confidence 99999999999999999999987 34444432 2221 34544 6899999988642 236777
Q ss_pred Ee-cCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEec
Q psy15447 223 VE-GVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGS 300 (457)
Q Consensus 223 ~e-~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~ 300 (457)
++ ++ .|...|+++|.++|++||++||+|++|++|.++. |. ..+. ...+|++++|++|++ |+.||+++++
T Consensus 174 ~~~~~---~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~-g~----~~~~-~~~~Di~~~s~~K~l~g~~GG~v~~~ 244 (416)
T PRK13034 174 AGFSA---YPRELDFARFREIADEVGALLMVDMAHIAGLVAA-GE----HPNP-FPHAHVVTTTTHKTLRGPRGGMILTN 244 (416)
T ss_pred ECCCc---cccccCHHHHHHHHHHcCCEEEEeCcccccCccc-CC----CCCC-CCCceEEEEeCcccCCCCCCeEEEEC
Confidence 74 43 3677799999999999999999999999988763 21 1121 135799999999999 5678888776
Q ss_pred HHHH-HHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-CCCCeEE
Q psy15447 301 SYII-EHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-RDTPLKY 377 (457)
Q Consensus 301 ~~~~-~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~ 377 (457)
++.+ +.++........+...++..++++++.++.++. .++++++++++.++|++.|++ .|+++..+ +.+++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~----~G~~~~~~~~~t~i~~ 320 (416)
T PRK13034 245 DEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKE----RGYDLVSGGTDNHLLL 320 (416)
T ss_pred cHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHH----cCCEeccCCCCCcEEE
Confidence 5443 434332111112223455555555555655533 245689999999999999998 58877532 5688988
Q ss_pred EEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc-ccCCCCCeEEEEecC----CCCHHHHHHHHHHHHHHHHH
Q psy15447 378 LYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCNI----SHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 378 i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-~~~~~~~~lRi~~~~----~~t~edi~~~~~~l~~~~~~ 450 (457)
+.+++... ....+.+.|.++||++.....|.. ..+..+..+|++++. .+|++|+++++++|++++..
T Consensus 321 v~~~~~~~------~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 321 VDLRPKGL------SGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLDD 392 (416)
T ss_pred EEcCCCCC------CHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence 88876420 234566788889999986433321 112335789999888 88899999999999988764
No 110
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=100.00 E-value=3.2e-30 Score=255.00 Aligned_cols=351 Identities=13% Similarity=0.115 Sum_probs=247.7
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCC-CCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSC-GPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIA 158 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~-~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~ 158 (457)
.++||+.--.-+|.. .+++.+|+.+....++..+. ..+...+..+.+.++++.+|+++|.+.++++++|++++..++.
T Consensus 18 ~~~~~~~~~~~~~p~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~ 96 (387)
T PRK09331 18 EEFINLDPIQRGGIL-TPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMH 96 (387)
T ss_pred ccccccChhhcCCCC-CHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHH
Confidence 345555433333332 56677777776644332111 2244455677899999999999999999999999999999999
Q ss_pred hhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447 159 AYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA 231 (457)
Q Consensus 159 a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G 231 (457)
+++++||.|+++...|.+.+.++...|.++..++. .|++++++.+++.... ..+++++|+++++++++|
T Consensus 97 ~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~----~~~~~~lV~l~~~~~~tG 172 (387)
T PRK09331 97 SLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEE----TGKPPALALLTHVDGNYG 172 (387)
T ss_pred HhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhc----cCCCCEEEEEECCCCCCc
Confidence 99999999999999999999889999999988876 4789999988753100 013567899999999999
Q ss_pred CCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc--ccEEEecHHHHHHHHh
Q psy15447 232 DICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV--GGFCVGSSYIIEHHRL 309 (457)
Q Consensus 232 ~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~--gG~v~~~~~~~~~~~~ 309 (457)
.+.|+++|.++|++||+++|+|++|+.|.++..+. . .++|++++|++|+++++ +|++++++++++.++.
T Consensus 173 ~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~----~-----~g~D~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~~ 243 (387)
T PRK09331 173 NLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGK----K-----LGADFIVGSGHKSMAASAPSGVLATTEEYADKVFR 243 (387)
T ss_pred ccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHH----H-----cCCCEEEeeCcccccCCCCEEEEEECHHHHhhccc
Confidence 99999999999999999999999999876543221 1 24589999999999753 4899999998888755
Q ss_pred hCCcce------ecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc--CCCCeEEEEec
Q psy15447 310 SGSGYC------FSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH--RDTPLKYLYLQ 381 (457)
Q Consensus 310 ~~~~~~------~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~--~~~~~~~i~~~ 381 (457)
...++. ++++.++...++++++++.+.+..+.+++..++.+++++.|++ ++|+++... ..++++.+..+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~---l~g~~~~~~~~~~~~i~~~~~~ 320 (387)
T PRK09331 244 TSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEK---IEGFKQLGEKPRNHDLMKFETP 320 (387)
T ss_pred ccCCCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCEEEeccCcCcCCeEEEeCC
Confidence 433221 3334444445555666766554434566777888999999998 458887632 23555555433
Q ss_pred CCcch-HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCCCC
Q psy15447 382 KSDDE-VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQPLN 456 (457)
Q Consensus 382 ~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~~~ 456 (457)
.-... .........+.+.|.++||...+.. ...+|...+..+|++|+++++++|++++++...+.|
T Consensus 321 ~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~---------~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~~~~~~ 387 (387)
T PRK09331 321 SFDEIAKKHKRRGFFLYEELKKRGIHGIKPG---------ATKEFKLSTYGLTWEQVEYVADAFKEIAEKYGLEVN 387 (387)
T ss_pred chhHHhhhccccchhHHHHHHHcCceEEccC---------CceEEEEEeccCCHHHHHHHHHHHHHHHHhcCCCCC
Confidence 11000 0001123568999999999843221 234444444558999999999999999888766543
No 111
>KOG1403|consensus
Probab=99.98 E-value=2.9e-31 Score=235.13 Aligned_cols=363 Identities=12% Similarity=0.133 Sum_probs=272.4
Q ss_pred CCceeeecCCCcEEEE-CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHh-hcC
Q psy15447 62 SSKYVVDQKSGYIVNI-NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIAS-FMG 139 (457)
Q Consensus 62 ~~~~~i~~~~g~~~~~-~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~-~~g 139 (457)
..|+.|++++|.|+.+ +|++|+|..+|...+-..||++.+|..+|+.... +-.|+ .++...+.++.|.. +.+
T Consensus 28 sDP~kivRaq~QYmfDE~g~~yLDCInNVaHvghchp~VV~A~~kQmat~~---tN~RF---lhd~lv~cA~~l~stlPe 101 (452)
T KOG1403|consen 28 SDPLKIVRAQGQYMFDEEGTRYLDCINNVAHVGHCHPEVVRAGAKQMATIS---TNNRF---LHDELVQCARTLTSTLPE 101 (452)
T ss_pred CCchhhehhccceeeccCcccHHHHhhhhhhcccCCHHHHHHHHHHHhHhc---ccchh---hHHHHHHHHHHHhhcCCC
Confidence 3688999999999995 8999999998854444469999999999998743 33444 34555555555554 556
Q ss_pred CCcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhcCC-----------e-EEEecCC----------
Q psy15447 140 LEETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIASRC-----------K-VQYFKHN---------- 194 (457)
Q Consensus 140 ~~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~g~-----------~-~~~~~~~---------- 194 (457)
.+-++|++||++||..|++. +++..|.|..+..||+.....+.++.- . +...|.+
T Consensus 102 Lsvc~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~ 181 (452)
T KOG1403|consen 102 LSVCFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDK 181 (452)
T ss_pred ceEEEEecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccc
Confidence 77889999999999999875 578899999999999876655444420 1 1111111
Q ss_pred -----C-----HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCc-ccc
Q psy15447 195 -----N-----MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESV-SFG 259 (457)
Q Consensus 195 -----d-----~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~-~~g 259 (457)
| .+.+++++++... ....+++++.|+.++-+|.+.| ++++.+..+.+|-+.|.||++ +||
T Consensus 182 ~~~~a~~~~~Yad~vk~I~~d~~~-----~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFG 256 (452)
T KOG1403|consen 182 MYPDADMGALYADPVKEICQDQLA-----KGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFG 256 (452)
T ss_pred cCCcccchhhhhhHHHHHHHHHHh-----cCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhccc
Confidence 1 2456666655432 1356778999999999998876 789999999999999999997 788
Q ss_pred cccCCCCccccccCCCCCCccEEEecCccccc--CcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh
Q psy15447 260 TLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG--SVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA 337 (457)
Q Consensus 260 ~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg--~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~ 337 (457)
+.|+.. |..+.++.-| ||+ |++|.+| .+-+.|+..+++.+.+...+-.|..+.+.+|++||++++.++..+.
T Consensus 257 RvG~hy-Wafq~y~fiP---DIV--tmgKpmGNGhPVa~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~ 330 (452)
T KOG1403|consen 257 RVGSHY-WAFQTYNFIP---DIV--TMGKPMGNGHPVAAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCED 330 (452)
T ss_pred ccchhh-hhhhhhcccc---chh--eecccCCCCCeeeEEeccHHHHHHhccccceehhccCCCchhHHHHHHHHHHHhh
Confidence 887643 3456677767 777 8999996 3457899999999988765555555556799999999999998875
Q ss_pred CcHHHHHHHHHHHHHHHHhhcccccCCeEEecc--CCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHc-CeeEeccccC
Q psy15447 338 NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH--RDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQA-GFAITCPSHL 413 (457)
Q Consensus 338 ~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~-Gi~v~~~~~~ 413 (457)
+ .+.++.++.+++|...|++++ ...++.++ +.+.++.+.+..+... .++.+.+..+..+|.+. ||+++.-+
T Consensus 331 E-~Lq~ha~~vG~~L~~lL~~~k--~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDG-- 405 (452)
T KOG1403|consen 331 E-NLQEHAQQVGEKLEVLLRRLK--QKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADG-- 405 (452)
T ss_pred h-hHHHHHHHHHHHHHHHHHHHh--hhccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCC--
Confidence 4 488888888888888887644 34455554 3466777776655433 55566777888888886 79887543
Q ss_pred ccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 414 DQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 414 ~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+..|.+.|-||.+.++++.++++..|++++...
T Consensus 406 -----Ph~NilKiKPPmCFneena~e~v~~ld~iLT~m 438 (452)
T KOG1403|consen 406 -----PHRNILKIKPPMCFNEENADEFVLGLDEILTVM 438 (452)
T ss_pred -----CCCceeecCCCcccChhhHHHHHHHHHHHHHHH
Confidence 457999999999999999999999999988644
No 112
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=5e-29 Score=244.48 Aligned_cols=339 Identities=17% Similarity=0.171 Sum_probs=255.6
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCc-EEEecccHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEE-TALYSFGFSTSA 154 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~-~i~~~sG~~a~~ 154 (457)
..+||++.+++ ++..++.+++++.+++..-+..+ + ...|..++++.+++.+.+..| .+. +++++++++|+.
T Consensus 28 ~~vi~l~iG~P-d~~~p~~i~~a~~~a~~~~~~~Y--~-~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~ 103 (393)
T COG0436 28 EDVIDLSIGEP-DFPTPEHIIEAAIEALEEGGTHY--T-PSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALF 103 (393)
T ss_pred CCEEEeCCCCC-CCCCCHHHHHHHHHHHhcccCCC--C-CCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHH
Confidence 46899988776 66667789999999998733211 1 345777888888888887776 224 667777779999
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC----C----CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH----N----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV 226 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~----~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v 226 (457)
.++.++..+||.|++..++|..+...+.+.|++++.++. + |++.+++.+.+ ++++|+++++
T Consensus 104 ~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~-----------ktk~i~ln~P 172 (393)
T COG0436 104 LAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP-----------KTKAIILNSP 172 (393)
T ss_pred HHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc-----------cceEEEEeCC
Confidence 999999999999999999999999999999999888763 1 57888887753 5689999999
Q ss_pred CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCC-CCccccccCCCCCCccEEEecCcccccCcc---cEEEe
Q psy15447 227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGST-GHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVG 299 (457)
Q Consensus 227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~-g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~ 299 (457)
+||||.+.+ +++|+++|++||++||.||+|....+... ...+.+..+. .+..|.+.||||.++++| ||+++
T Consensus 173 ~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~--~~~~i~i~s~SK~~~mtGwRvG~~v~ 250 (393)
T COG0436 173 NNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGA--RDRTITINSFSKTYGMTGWRIGWVVG 250 (393)
T ss_pred CCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCC--cceEEEEecccccccccccceeEeec
Confidence 999999988 78999999999999999999986666431 2222222221 234588999999998776 99999
Q ss_pred c-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh---CcHHHHHHHHHHHHHHHHhhcccccCCeEEec-cCCCC
Q psy15447 300 S-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA---NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG-HRDTP 374 (457)
Q Consensus 300 ~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~---~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~ 374 (457)
+ +++++.+.... .+... +.+.+...++.++|+.-+. ....++.++++++.+.+.|.+ ..|+.+.. +.+++
T Consensus 251 ~~~~l~~~~~~~~-~~~~~-~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~---~~g~~~~~~p~Ga~ 325 (393)
T COG0436 251 PPEELIAALRKLK-SYLTS-CAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNE---IGGLSVVKPPEGAF 325 (393)
T ss_pred ChHHHHHHHHHHH-Hhccc-CCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHh---cCCeeeccCCCeeE
Confidence 8 87887776332 12222 3477777888888764422 123456788999999999998 56788876 34566
Q ss_pred eEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 375 LKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 375 ~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
.++..+.... +..+++++|+++ ||.+.|+..+.. ..+.+++|+++.. ++++++++++.+.+.++..
T Consensus 326 Y~~~~i~~~~-------d~~~f~~~Ll~~~gV~v~PG~~Fg~--~~g~~~vRis~~~--~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 326 YLFPKIPELL-------DSEEFAKKLLEEAGVAVVPGSGFGE--PPGEGYVRLSLAT--SEETLEEALRRLARFLAEY 392 (393)
T ss_pred EEEeecCCCC-------CHHHHHHHHHHhCCEEEecccccCC--CCCCCeEEEEEec--CHHHHHHHHHHHHHHHHhc
Confidence 7777776533 456899988876 899999887532 2356899999875 5699999999999887653
No 113
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.97 E-value=1.1e-29 Score=250.07 Aligned_cols=333 Identities=20% Similarity=0.225 Sum_probs=243.3
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC--------CCcEEEecccHHH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG--------LEETALYSFGFST 152 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~~~i~~~sG~~a 152 (457)
++|||++|++....++|.+.+++.+..+ +.........|+......+|++.++++++ .+..+++++|+.+
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~ 79 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIR--GAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQA 79 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHH--HHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHH--HhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEeccccc
Confidence 5799999999888777766666666554 11111223345556667899999999887 3436777777755
Q ss_pred -HHHHHHhh-cCCCCEEEEeCcccHHHHHHHHhcCCeEEEec-------CCCHHHHHHHHHhhchhcccCCCC-ccEEEE
Q psy15447 153 -SASAIAAY-VKRNDAVFVDENINFAIQTGLIASRCKVQYFK-------HNNMQHLEELLRQQDERDTLNSKV-TKKFII 222 (457)
Q Consensus 153 -~~~ai~a~-~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~-------~~d~~~le~~l~~~~~~~~~~~~~-~~~~vi 222 (457)
+..+...+ .++||.|+++.++|..+...++..|.+++.++ +.|+++|++.+++...+ . ++.+|+
T Consensus 80 ~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~------~~~~~~v~ 153 (363)
T PF00155_consen 80 ALFLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSK------GPRPKAVL 153 (363)
T ss_dssp HHHHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTT------TETEEEEE
T ss_pred chhhhhhcccccccccceecCCccccccccccccCceeeecccccccccccccccccccccccccc------ccccceee
Confidence 44445556 57999999999999999999999999999888 66999999999875421 2 457888
Q ss_pred EecCCCCCCCCCChHHHH---HHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cE
Q psy15447 223 VEGVYMNSADICPLKDIL---SLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GF 296 (457)
Q Consensus 223 ~e~v~~~~G~i~~l~~i~---~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~ 296 (457)
+++++||+|...+.+++. ++|++||+++|+||+|+...++..+.... ...+......|++.|+||++|.+| ||
T Consensus 154 ~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~~~~~vi~~~S~SK~~g~~GlRvG~ 232 (363)
T PF00155_consen 154 ICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPI-RSLLDEDDNVIVVGSLSKSFGLPGLRVGY 232 (363)
T ss_dssp EESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHH-HGHHTTTSTEEEEEESTTTTTSGGGTEEE
T ss_pred ecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcc-cccccccccceeeeecccccccccccccc
Confidence 999999999999865554 55999999999999999887765422110 111211111589999999999888 99
Q ss_pred EEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh----hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC
Q psy15447 297 CVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK----ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD 372 (457)
Q Consensus 297 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~----~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~ 372 (457)
+++++++++.++.....+.. +.+..+++.+.+.... ...+++++++++.+++.+.|++ .++.+..+..
T Consensus 233 i~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~~~~~~~~~~ 304 (363)
T PF00155_consen 233 IVAPPELIERLRRFQRSGLS----SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEE----IGITVLPPEA 304 (363)
T ss_dssp EEEEHHHHHHHHHHHHHTTS----SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTSEEEHHSB
T ss_pred ccchhhhhhhhhhccccccc----cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH----hhhheeeccC
Confidence 99999999988765433222 4444444444443322 2345788899999999999988 5888876666
Q ss_pred CCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447 373 TPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL 444 (457)
Q Consensus 373 ~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l 444 (457)
+.++++.+... +..++++.|+++ ||.+.++.++. .++++|+++ ..++++++++++++|
T Consensus 305 ~~~~~~~~~~~--------~~~~l~~~L~~~~gi~v~pg~~~~-----~~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 305 GFFLWVRLDPN--------DAEELAQELLEEYGILVRPGSYFG-----VPGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp SSEEEEEESHH--------HHHHHHHHHHHHHTEEEEEGGGGT-----STTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred ccEEEEEcccc--------hHHHHHHHHHHhCCEEEEecCCCC-----CCCEEEEEe-ccCCHHHHHHHHhhC
Confidence 66666655532 456899999998 99999987753 278999999 778999999999876
No 114
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.97 E-value=5.6e-28 Score=239.46 Aligned_cols=336 Identities=13% Similarity=0.115 Sum_probs=240.0
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHHHHH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTSASA 156 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~~~a 156 (457)
.+++|..+.+ .+...+.+.+++.+.+..... .+....|..++...+++.+.+.+| .+++++++++++++..+
T Consensus 25 ~~i~l~~g~~-~~~~~~~~~~~~~~~~~~~~~---~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~ 100 (382)
T PRK06108 25 GVLPLWFGES-DLPTPDFIRDAAAAALADGET---FYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLA 100 (382)
T ss_pred CeEEecCCCC-CCCCCHHHHHHHHHHHhcCCC---CCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHH
Confidence 5788887654 354568899999888765211 122334566777777777776666 34567777788999999
Q ss_pred HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC--------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447 157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN--------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM 228 (457)
Q Consensus 157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~--------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~ 228 (457)
+.+++++||.|++..++|..+...++..|.++..++.+ |++++++.+. .+++++++++++|
T Consensus 101 ~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~-----------~~~~~i~l~~p~N 169 (382)
T PRK06108 101 AQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAIT-----------PRTRALFINSPNN 169 (382)
T ss_pred HHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcC-----------ccceEEEEECCCC
Confidence 99999999999999999998888888889988877653 5677776663 2356777788999
Q ss_pred CCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCC-CCCccEEEecCcccccCcc---cEEEecH
Q psy15447 229 NSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVS-TEEVDMIIGSLEHALGSVG---GFCVGSS 301 (457)
Q Consensus 229 ~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~-~~~~Di~~~s~sK~lg~~g---G~v~~~~ 301 (457)
|+|.+.+ +++|.++|++||+++|+||+|+...++..+. ......+. +.+..++++||||.+|.+| ||+++++
T Consensus 170 PtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~ 248 (382)
T PRK06108 170 PTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGR-APSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPP 248 (382)
T ss_pred CCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCC-CCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCH
Confidence 9999887 6789999999999999999998765541111 11111221 2234588999999998666 9999999
Q ss_pred HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447 302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL 380 (457)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~ 380 (457)
++++.+.... .+. +.+.+++.+.++.++++.-.+ .++.+++++++.+++.+.|++ .+++.+..+..+.++++.+
T Consensus 249 ~~~~~~~~~~-~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~p~~g~~~~~~l 323 (382)
T PRK06108 249 ALGQVLEKLI-EYN-TSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRA---LPGVEVAKPDGAMYAFFRI 323 (382)
T ss_pred HHHHHHHHHH-Hhc-ccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh---CCCCcccCCCeeEEEEEeC
Confidence 9988876432 111 223466666666666643211 134677888888999999987 4577765444566677777
Q ss_pred cCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 381 QKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
+... ...+++++|+ ++||.+.++..+. +...+++|++++. ++++++++++.|+++++
T Consensus 324 ~~~~-------~~~~~~~~ll~~~gV~v~pg~~f~---~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 324 PGVT-------DSLALAKRLVDEAGLGLAPGTAFG---PGGEGFLRWCFAR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred CCCC-------CHHHHHHHHHHhCCEEEeCchhhC---CCCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 6543 3457888886 4699998865421 1235799999987 89999999999988764
No 115
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.97 E-value=4e-28 Score=243.03 Aligned_cols=336 Identities=14% Similarity=0.107 Sum_probs=244.3
Q ss_pred eeeEEee-cCCccCCCCChhhHHHHHHHH-HhcCCCCCCCCCcccChHHHHHHHH----HHHhhcCCC-cEEEe----cc
Q psy15447 80 IPCINFA-THNYLSFVENPDIEKCAIDCI-DKNGVGSCGPRGFYGTNVVHLDLEN----DIASFMGLE-ETALY----SF 148 (457)
Q Consensus 80 ~~~id~~-s~~~l~~~~~p~i~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l~~----~la~~~g~~-~~i~~----~s 148 (457)
++.|++. |-|+ -+|.+.++....+ .+|+.++.+.|...|+. .+.++|+ +..+.++.+ ..+.+ +|
T Consensus 34 ~~~l~liasen~----~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~-~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~S 108 (475)
T PLN03226 34 WKGLELIASENF----TSRAVMEALGSCLTNKYSEGLPGARYYGGNE-YIDQIETLCQKRALEAFRLDPEKWGVNVQPLS 108 (475)
T ss_pred HcCeeEecCCcc----CCHHHHHHHhhHHhccccCCCCCCcCcCCCh-hHHHHHHHHHHHHHHHhCCCcceeEEecCcCc
Confidence 3455653 4344 2588999999999 89999999999887775 7788876 344445544 44444 89
Q ss_pred cHHHHHHHHHhhcCCCCEEEEeC------cccHHHHHHHHhcCCeEE----EecCC------CHHHHHHHHHhhchhccc
Q psy15447 149 GFSTSASAIAAYVKRNDAVFVDE------NINFAIQTGLIASRCKVQ----YFKHN------NMQHLEELLRQQDERDTL 212 (457)
Q Consensus 149 G~~a~~~ai~a~~~~gd~v~~~~------~~h~~~~~~~~~~g~~~~----~~~~~------d~~~le~~l~~~~~~~~~ 212 (457)
|+.||..++.+++++||.|+.++ ..|++...+.+++..... .|+++ |++++++.+++.
T Consensus 109 G~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~------ 182 (475)
T PLN03226 109 GSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLF------ 182 (475)
T ss_pred hHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhc------
Confidence 99999999999999999999854 446666666665555433 66667 999999998752
Q ss_pred CCCCccEEEEE-ecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-
Q psy15447 213 NSKVTKKFIIV-EGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL- 290 (457)
Q Consensus 213 ~~~~~~~~vi~-e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l- 290 (457)
++++|++ ++++ |...|+++|+++|++||++|++|++|++|.++..+.. .. .+.+|++++|++|+|
T Consensus 183 ----~pklIv~~~S~~---s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~--~p----~~~~Div~~t~hK~L~ 249 (475)
T PLN03226 183 ----RPKLIIAGASAY---PRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAA--SP----FEYCDVVTTTTHKSLR 249 (475)
T ss_pred ----CCeEEEEecCcC---CCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCC--CC----CCCCeEEEecCccccc
Confidence 2344444 5544 5677899999999999999999999999988764422 11 135799999999999
Q ss_pred cCcccEEEecHHHH-----------HH--HHhhCCcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHH
Q psy15447 291 GSVGGFCVGSSYII-----------EH--HRLSGSGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSL 355 (457)
Q Consensus 291 g~~gG~v~~~~~~~-----------~~--~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~ 355 (457)
|+.||++++++... +. ..+......+++++++..+++..++++.+.+. ++.++++.+++++|++.
T Consensus 250 GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~ 329 (475)
T PLN03226 250 GPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANR 329 (475)
T ss_pred CCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHH
Confidence 78899999887544 33 22223334566677777778888889988654 34789999999999999
Q ss_pred hhcccccCCeEEecc-CCCCeEEEEecC-CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEE----Eec
Q psy15447 356 LSQHKVTQRFLVQGH-RDTPLKYLYLQK-SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRI----TCN 429 (457)
Q Consensus 356 L~~~~~~~~~~~~~~-~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi----~~~ 429 (457)
|++ .|+.+... ..++++.+.+.. .. ...++.+.|.+.||.+....-|....+..++.+|+ ..+
T Consensus 330 L~~----~G~~l~~~~t~~hi~lv~~~~~gi-------~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~ 398 (475)
T PLN03226 330 LMS----KGYKLVTGGTDNHLVLWDLRPLGL-------TGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTS 398 (475)
T ss_pred HHh----CCCEEEcCCCCCCEEEEEccCCCC-------CHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHH
Confidence 998 78888653 336777776632 22 33467778888999987654332211223467998 567
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q psy15447 430 ISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 430 ~~~t~edi~~~~~~l~~~~~~ 450 (457)
..++++|++++.+.|.++++.
T Consensus 399 ~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 399 RGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 788999999999999999874
No 116
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.97 E-value=2.3e-27 Score=235.99 Aligned_cols=342 Identities=15% Similarity=0.131 Sum_probs=239.5
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-----CcEEEecccHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-----EETALYSFGFSTSA 154 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-----~~~i~~~sG~~a~~ 154 (457)
++.+||..+++--+..+|.+.+++.+.+.+.+. .++....|..++...+++.++++.|. +++++++++++++.
T Consensus 39 ~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~ 116 (405)
T PRK06207 39 GRPVDFSHGDVDAHEPTPGAFELFSAGVERGGV--QAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALF 116 (405)
T ss_pred CCceecCCcCCCCCCCCHHHHHHHHHHHhcCCC--ccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHH
Confidence 567788765442234467888888888765322 12333456777888888888887773 45666667778999
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC----------CCHHHHHHHHHhhchhcccCCCCccEEEEEe
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH----------NNMQHLEELLRQQDERDTLNSKVTKKFIIVE 224 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~----------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e 224 (457)
.++.+++++||.|++..++|......+...|.++..++. .|++++++.+++ ++++|++.
T Consensus 117 ~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~-----------~~k~v~l~ 185 (405)
T PRK06207 117 LAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA-----------GVRVFLFS 185 (405)
T ss_pred HHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh-----------cCeEEEEC
Confidence 999999999999999999999988888888988876653 267888877753 34677788
Q ss_pred cCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEE
Q psy15447 225 GVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCV 298 (457)
Q Consensus 225 ~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~ 298 (457)
+++||+|.+.+ +++|.++|++||+++|+||+|+...+..........+...+++ .|+++||||++|.+| ||++
T Consensus 186 ~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~-vi~i~SfSK~~~lpGlRiG~ii 264 (405)
T PRK06207 186 NPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPEN-VITIMGPSKTESLSGYRLGVAF 264 (405)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCc-EEEEecchhhccCcccceEEEE
Confidence 88999999998 6788899999999999999998654421111111111222333 489999999997555 9999
Q ss_pred ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEE
Q psy15447 299 GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL-KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKY 377 (457)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~-~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 377 (457)
+++++++.+......+.. +.+.+..+++.+.++.- ....+.+++++++.+.+.+.|++ ..++.+..+..+.++|
T Consensus 265 ~~~~l~~~~~~~~~~~~~--~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~---~~~~~~~~p~gg~fl~ 339 (405)
T PRK06207 265 GSPAIIDRMEKLQAIVSL--RAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRG---VEGVFVRAPQAGSYLF 339 (405)
T ss_pred cCHHHHHHHHHHHhHhcc--CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc---CCCceecCCCeeEEEE
Confidence 999998888654332222 23444555555554321 00123456667777888888877 4567765455678888
Q ss_pred EEecC-CcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 378 LYLQK-SDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 378 i~~~~-~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+.++. .. ...++++.|+ ++||.+.++..+. ....+++||++.. +++++++.++.|.+++++.+
T Consensus 340 ~~l~~~~~-------~~~~~~~~l~~~~gV~v~pG~~F~---~~~~~~~Ris~~~--~~~~l~~al~rl~~~l~~~~ 404 (405)
T PRK06207 340 PRLPRLAV-------SLHDFVKILRLQAGVIVTPGTEFS---PHTADSIRLNFSQ--DHAAAVAAAERIAQLIERYR 404 (405)
T ss_pred EeCcccCC-------CHHHHHHHHHHhcCEEEeCchHhC---CCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHhh
Confidence 88864 22 3456888887 6799999876432 1235799999974 78999999999999887653
No 117
>PLN00175 aminotransferase family protein; Provisional
Probab=99.97 E-value=1.6e-27 Score=237.46 Aligned_cols=340 Identities=17% Similarity=0.148 Sum_probs=237.8
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----C-cEEEecccHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----E-ETALYSFGFSTS 153 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~-~~i~~~sG~~a~ 153 (457)
+..++||..+.+ ++...+.+.+++.+.+++ +. ..+....|..++...+++.+.+..|. + .+++++++++|+
T Consensus 53 ~~~~i~l~~G~P-~~~~~~~~~~~~~~~~~~-~~--~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al 128 (413)
T PLN00175 53 KHGAINLGQGFP-NFDGPDFVKEAAIQAIRD-GK--NQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAI 128 (413)
T ss_pred cCCeEecCCCCC-CCCCCHHHHHHHHHHHhc-CC--CCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHH
Confidence 346899988765 455567889999888875 21 11222345556666666666555452 2 345555667899
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY 227 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~ 227 (457)
..++.+++++||.|++..+.|..+...++..|.++..++. .|++++++.+.. ++++|++++++
T Consensus 129 ~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~-----------~~k~i~i~~p~ 197 (413)
T PLN00175 129 AATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTS-----------KTRAILINTPH 197 (413)
T ss_pred HHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCc-----------CceEEEecCCC
Confidence 9999999999999999999999998889999998887753 256777776632 45778888999
Q ss_pred CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecH
Q psy15447 228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSS 301 (457)
Q Consensus 228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~ 301 (457)
||+|.+.+ +++|.++|++||+++|+||+|....++.....+....+. .+..|+++||||.+|.+| ||+++++
T Consensus 198 NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~--~~~vi~i~SfSK~~~~~G~RiG~~v~~~ 275 (413)
T PLN00175 198 NPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGM--YERTVTMNSLGKTFSLTGWKIGWAIAPP 275 (413)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCC--cCcEEEEecchhhccCcchheeeeEeCH
Confidence 99999987 678899999999999999999876554322222222222 233689999999998777 9999999
Q ss_pred HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447 302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL 380 (457)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~ 380 (457)
++++.+........++ .+++...++.++|+..+. .++.++.++++.+.+.+.|++ .|+.+..+.++.++|+.+
T Consensus 276 ~l~~~l~~~~~~~~~~--~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~p~g~~f~~~~~ 349 (413)
T PLN00175 276 HLTWGVRQAHSFLTFA--TATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKE----VGFKVYPSSGTYFVMVDH 349 (413)
T ss_pred HHHHHHHHHHhhccCC--CCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH----CCCeecCCCeeEEEEEec
Confidence 9988886543222233 355555666566642211 134677888899999999988 577776555566677776
Q ss_pred cC-CcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 381 QK-SDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 381 ~~-~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
.. ... ...+++++|+ ++||.+.|+..+........+++||+++. +++++++.++.|+++++
T Consensus 350 ~~~~~~------~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~--~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 350 TPFGFE------NDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK--DEETLRAAVERMKTKLK 412 (413)
T ss_pred cccCCC------CHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC--CHHHHHHHHHHHHHHHh
Confidence 32 110 2357888887 46999988754321111235799999973 79999999999988765
No 118
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=1.3e-27 Score=235.49 Aligned_cols=325 Identities=13% Similarity=0.097 Sum_probs=234.5
Q ss_pred CCeeeEEeecC-CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC-cEEEecccH-HHHH
Q psy15447 78 NGIPCINFATH-NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE-ETALYSFGF-STSA 154 (457)
Q Consensus 78 ~G~~~id~~s~-~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG~-~a~~ 154 (457)
++++++||+++ ++++ .+|.+.+++.+.+..+.. + +. ....+|++.+|++++.+ +.+++++|+ +++.
T Consensus 30 ~~~~~i~l~~~~~~~~--~~~~~~~a~~~~~~~~~~-y-------~~-~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~ 98 (367)
T PRK02731 30 GIADIIKLASNENPLG--PSPKAIEAIRAAADELHR-Y-------PD-GSGFELKAALAEKFGVDPERIILGNGSDEILE 98 (367)
T ss_pred CCCceEEecCCCCCCC--CCHHHHHHHHHHHHhhcC-C-------CC-CcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHH
Confidence 57889999987 4555 468899999888765321 1 11 11368999999999865 345555555 6677
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS 230 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~ 230 (457)
.++.+++++||.|+++.+.|..+.......|.++..++.+ |++++++.+.. ++++|++++++||+
T Consensus 99 ~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~-----------~~~~v~l~~p~npt 167 (367)
T PRK02731 99 LLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPAKDYGHDLDAMLAAVTP-----------RTRLVFIANPNNPT 167 (367)
T ss_pred HHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecccCCCCCHHHHHHHhCC-----------CCcEEEEeCCCCCC
Confidence 7778888999999999999887776677889888887643 67888777642 34677788999999
Q ss_pred CCCCChHHHHHHHHHc--CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHH
Q psy15447 231 ADICPLKDILSLRSKY--QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIE 305 (457)
Q Consensus 231 G~i~~l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~ 305 (457)
|.+.|.+++.++|+.+ |+++|+||+|....++..........+.. +..++++|+||.+|.+| ||+++++++++
T Consensus 168 G~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~--~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~ 245 (367)
T PRK02731 168 GTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKF--PNVVVTRTFSKAYGLAGLRVGYGIAPPEIID 245 (367)
T ss_pred CcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhc--CCEEEEeeehHhhcCcccceeeeeCCHHHHH
Confidence 9999999999999875 99999999987654432111111222221 22588999999998666 99999999998
Q ss_pred HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc
Q psy15447 306 HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD 385 (457)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 385 (457)
.+...... + ..+++...++.+.++..+..++.++.++++.+.+.+.|++ .|+.+. ++.++++++.++...
T Consensus 246 ~l~~~~~~--~--~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~g~~~~i~~~~~~- 315 (367)
T PRK02731 246 ALNRVRQP--F--NVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAE----LGLEYI-PSVGNFILVDFDDGK- 315 (367)
T ss_pred HHHHccCC--C--CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH----CCCccC-CCCceEEEEECCCCC-
Confidence 88754332 2 2356666666666542221234566777788888888888 466654 456888898885443
Q ss_pred hHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 386 EVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 386 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
...++++.|.++||.+++...+ ..++++|++++ +.+|+++++++|+++++.
T Consensus 316 ------~~~~~~~~L~~~gI~v~~~~~~-----~~~~~iRis~~---~~~e~~~l~~aL~~~~~~ 366 (367)
T PRK02731 316 ------DAAEAYQALLKRGVIVRPVAGY-----GLPNALRITIG---TEEENRRFLAALKEFLAA 366 (367)
T ss_pred ------CHHHHHHHHHHCCEEEEeCCCC-----CCCCeEEEecC---CHHHHHHHHHHHHHHHhc
Confidence 4568899999999999886542 22478999985 789999999999988653
No 119
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.97 E-value=7.2e-28 Score=236.60 Aligned_cols=339 Identities=14% Similarity=0.132 Sum_probs=238.6
Q ss_pred eeeEEee-cCCccCCCCChhhHHHHHHHHH-hcCCCCCCCCCcccChHHHHHH----HHHHHhhcCCCcE-EEecccHHH
Q psy15447 80 IPCINFA-THNYLSFVENPDIEKCAIDCID-KNGVGSCGPRGFYGTNVVHLDL----ENDIASFMGLEET-ALYSFGFST 152 (457)
Q Consensus 80 ~~~id~~-s~~~l~~~~~p~i~~a~~~~l~-~~~~~~~~~~~~~g~~~~~~~l----~~~la~~~g~~~~-i~~~sG~~a 152 (457)
+..|++. |-|+ -+|.+.++....+. +|..++.+.|.+.|. +...++ .++..++||.+.+ +-..||+.|
T Consensus 49 ~~~l~LiasEN~----~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~-~~~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~A 123 (493)
T PRK13580 49 RSSLKLIASENY----SSLAVQLAMGNLLTDKYAEGTPGHRFYAGC-QNVDTVEWEAAEHAKELFGAEHAYVQPHSGADA 123 (493)
T ss_pred hcCceEeccccc----CCHHHHHHhcccccccCcCCCCCccccCCC-chHHHHHHHHHHHHHHHhCCCcccccCCCcHHH
Confidence 3455553 3333 25778777766664 576677666665443 333333 3344457888866 556799999
Q ss_pred HHHHHHhhcCC-------------------------------CCEEEEeCcccHHHH---HHHHhcC--CeEEEecC---
Q psy15447 153 SASAIAAYVKR-------------------------------NDAVFVDENINFAIQ---TGLIASR--CKVQYFKH--- 193 (457)
Q Consensus 153 ~~~ai~a~~~~-------------------------------gd~v~~~~~~h~~~~---~~~~~~g--~~~~~~~~--- 193 (457)
|..++.++.++ ||.|+.-...|+... ......+ .....++.
T Consensus 124 n~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~ 203 (493)
T PRK13580 124 NLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPD 203 (493)
T ss_pred HHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcc
Confidence 99999999876 788887544432211 1112222 22222322
Q ss_pred ---CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcccc
Q psy15447 194 ---NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTE 270 (457)
Q Consensus 194 ---~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~ 270 (457)
.|++++++.+.+. +..|++.+..+. +...|+++|+++|++||++|++|++|++|.+| +.+..+
T Consensus 204 ~g~iD~d~l~~~~~~~-----------~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Glig--g~~~~~ 269 (493)
T PRK13580 204 TGLLDYDEIAALAREF-----------KPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVA--GKVFTG 269 (493)
T ss_pred cCccCHHHHHHHHhhc-----------CCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceec--cccchh
Confidence 3788999888652 235555566655 55779999999999999999999999999987 233222
Q ss_pred ccCCCCCCccEEEecCcccc-cCcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHH
Q psy15447 271 YFGVSTEEVDMIIGSLEHAL-GSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREK 348 (457)
Q Consensus 271 ~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~ 348 (457)
.++.. .++|++++|+||++ |+.||++++++++++.+. .+.++.+++..+|..++++.+..+..... .+.++++++|
T Consensus 270 ~~~~~-~~~D~vtgT~hKaL~GP~GG~I~~~~~l~~~L~-~a~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~N 347 (493)
T PRK13580 270 DEDPV-PHADIVTTTTHKTLRGPRGGLVLAKKEYADAVD-KGCPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDN 347 (493)
T ss_pred hcCCC-CCCcEEEeCChhhccCCCeEEEEecHHHHHHHh-hCCCcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHH
Confidence 22222 36799999999999 778999999999999885 44578899888886666666544433222 4578999999
Q ss_pred HHHHHHHhhcccccCCeEEec-cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCC---CCeE
Q psy15447 349 CNTMHSLLSQHKVTQRFLVQG-HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQ---KPSI 424 (457)
Q Consensus 349 ~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~---~~~l 424 (457)
+++|++.|.+ .|+++.. ...++++++.+++.. .....+.+.|.++||++....+|.+ +.+ ...|
T Consensus 348 a~~La~~L~~----~G~~vv~ggTdshIV~V~lg~~~------~~g~~a~~~L~e~GI~vn~i~~Ptv--p~g~~~~srL 415 (493)
T PRK13580 348 ARALAEGFLK----RGARLVTGGTDNHLVLIDVTSFG------LTGRQAESALLDAGIVTNRNSIPSD--PNGAWYTSGI 415 (493)
T ss_pred HHHHHHHHHh----cCCCccCCCCCCCEEEEEeCCHH------HHHHHHHHHHHHCCeEEccccCCCC--CCCCCCCceE
Confidence 9999999998 7887753 356899999987643 1233677789999999999888876 433 6789
Q ss_pred EEEecC----CCCHHHHHHHHHHHHHHHHHh
Q psy15447 425 RITCNI----SHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 425 Ri~~~~----~~t~edi~~~~~~l~~~~~~~ 451 (457)
||+++. .++++||+++++.|.++++..
T Consensus 416 RIg~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 416 RLGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred EeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 999988 667999999999999888754
No 120
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.97 E-value=1.7e-27 Score=233.92 Aligned_cols=327 Identities=12% Similarity=0.111 Sum_probs=229.2
Q ss_pred hhhHHHHHHHHHhcCCCCCCCCCcc-----cChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeC
Q psy15447 97 PDIEKCAIDCIDKNGVGSCGPRGFY-----GTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDE 171 (457)
Q Consensus 97 p~i~~a~~~~l~~~~~~~~~~~~~~-----g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~ 171 (457)
..+.+++.+++.+||.++++++... ...+...++++++++++|.+.++++++|++++..++.+++++||.|+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~ 90 (361)
T cd06452 11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLCEKGDWVVVDG 90 (361)
T ss_pred CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEcC
Confidence 4577788888888887666665422 23467899999999999998888888888999999999999999999999
Q ss_pred cccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHH
Q psy15447 172 NINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS 244 (457)
Q Consensus 172 ~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~ 244 (457)
+.|.+....+...|.++..++. .|++++++.+++.... . ..++++|++++++|++|.+.|+++|.++|+
T Consensus 91 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~---~-~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~ 166 (361)
T cd06452 91 LAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDE---F-GKPPALALLTHVDGNYGNLHDAKKIAKVCH 166 (361)
T ss_pred CcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhc---c-CCCceEEEEECCCCCCeeeccHHHHHHHHH
Confidence 9999988888888988887653 3688898888642210 0 024678888899999999999999999999
Q ss_pred HcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcc------ee
Q psy15447 245 KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGY------CF 316 (457)
Q Consensus 245 ~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~------~~ 316 (457)
+||+++|+||+|++|.+...+ .. .++|++++|++|++++ ++|++++++++++.++.....+ ..
T Consensus 167 ~~~~~vivD~a~~~g~~~~~~----~~-----~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~ 237 (361)
T cd06452 167 EYGVPLLLNGAYTVGRMPVSG----KE-----LGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTSQMFKIKEVELL 237 (361)
T ss_pred HcCCeEEEECCcccCCcCCCH----HH-----cCCCEEEecCCccccCCCCeEEEEECHHHHHHHhccccccccceeeee
Confidence 999999999999876442211 11 2358999999999964 3489999999888875433221 11
Q ss_pred cCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec--cCCCCeEEEEecCCcchH-HHHHHH
Q psy15447 317 SASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG--HRDTPLKYLYLQKSDDEV-ASKKLL 393 (457)
Q Consensus 317 ~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~-~~~~~~ 393 (457)
+++.++..++++.++++.+.+.-+...+..++.+++.+.|++ ++|+.+.. +...+++.+....-.... ......
T Consensus 238 ~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~---l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 314 (361)
T cd06452 238 GCTLRGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEK---IEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRG 314 (361)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCeEEECCCCCCCceEEEEcCCcchhhhhccccc
Confidence 222233334444555654433222334445566899999988 45887753 234556655543110000 000023
Q ss_pred HHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 394 QTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 394 ~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
.++.++|+++||++... ....++|++. ..+|++|++.++++|+++.
T Consensus 315 ~~~~~~L~~~gI~~~~~--------~~~~~~ri~~-~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 315 YFLYSELKKRGIHGIKP--------GLTRYFKLST-YGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred hhHHHHHHHcCceEEcC--------CCceEEEEEe-cCCCHHHHHHHHHHHHHHh
Confidence 36899999999985321 2245789988 3379999999999998754
No 121
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.97 E-value=2.6e-27 Score=235.58 Aligned_cols=334 Identities=14% Similarity=0.126 Sum_probs=233.3
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----C-CcEEEecccHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----L-EETALYSFGFSTS 153 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~-~~~i~~~sG~~a~ 153 (457)
|.+++||+.+++ .+...+.+.+++.+.+.+... .++. ..|..++.+.+++.+.+..| . +.+++++++++++
T Consensus 31 ~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~~~--~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al 106 (399)
T PRK07681 31 GHKMIDLSIGNP-DMPPADFVREEMVHTANQKES--YGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGL 106 (399)
T ss_pred CCCeEEeCCCCC-CCCCCHHHHHHHHHHHhcccc--CCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHH
Confidence 567899988764 345568888888887764221 1111 13555555555555554434 2 3455556666899
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV 226 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v 226 (457)
..++.+++++||.|+++.++|..+...+...|.++..++.+ |++++++.+. .++++|++.++
T Consensus 107 ~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~-----------~~~k~v~l~~P 175 (399)
T PRK07681 107 VHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIA-----------DKAKMMILNFP 175 (399)
T ss_pred HHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc-----------ccceEEEEeCC
Confidence 99999999999999999999999988889999998887643 5666666553 24567777788
Q ss_pred CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC-CCccEEEecCcccccCcc---cEEEe
Q psy15447 227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST-EEVDMIIGSLEHALGSVG---GFCVG 299 (457)
Q Consensus 227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~-~~~Di~~~s~sK~lg~~g---G~v~~ 299 (457)
+||+|.+.+ +++|.++|++||+++|+||+|+...+.. ........+.. .+..|+++||||.+|.+| ||+++
T Consensus 176 ~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~ 253 (399)
T PRK07681 176 GNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDG--NKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIG 253 (399)
T ss_pred CCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCC--CCCCChhhCCCCcccEEEEeecccccCCccceeEEEec
Confidence 999999999 7788999999999999999998655432 11111112211 133588999999998766 99999
Q ss_pred cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE
Q psy15447 300 SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL-KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL 378 (457)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~-~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i 378 (457)
++++++.+........++ .+.+...++.+.++.- +..++.++.++++.+.+.+.|++ .|+.+..+.++.++|+
T Consensus 254 ~~~l~~~~~~~~~~~~~~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~p~~g~f~~~ 327 (399)
T PRK07681 254 NEEIVRALTQFKSNTDYG--VFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRT----FGWNVDKPAGSMFVWA 327 (399)
T ss_pred CHHHHHHHHHHHhhcccC--CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCeeeEEEE
Confidence 999998886543222232 3455555555555321 11134566778888899999988 4776654566888888
Q ss_pred EecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 379 YLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
.++... ...+++++|++ +||.+.++..+. ....+++|+++. .+++++++++++|+++
T Consensus 328 ~l~~~~-------~~~~~~~~l~~~~gv~v~pg~~f~---~~~~~~iRis~~--~~~~~~~~~l~~l~~~ 385 (399)
T PRK07681 328 EIPKGW-------TSLSFAYALMDRANVVVTPGHAFG---PHGEGFVRIALV--QDEEVLQQAVENIRNS 385 (399)
T ss_pred ECCCCC-------CHHHHHHHHHHhCCEEEeCChhhC---cCCCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 887543 34578888887 799999875431 122478999997 4789999999999884
No 122
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.97 E-value=2.8e-27 Score=235.13 Aligned_cols=345 Identities=11% Similarity=0.100 Sum_probs=233.3
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-----CcEEEeccc-HH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-----EETALYSFG-FS 151 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-----~~~i~~~sG-~~ 151 (457)
.|++++|++++.+ .+...|.+.+++.+.+..... .++.. .|..++...+++.+.+..|. +..+++++| .+
T Consensus 42 ~~~~~i~L~~g~p-~~~~~~~~~~~l~~~~~~~~~--~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~ 117 (410)
T PRK06290 42 PDMELIDMGVGEP-DEMADESVVEVLCEEAKKPEN--RGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKP 117 (410)
T ss_pred CCCCeEEcCCCCC-CCCCCHHHHHHHHHHHhCCCC--CCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHH
Confidence 3677899998764 444567788888776643211 11221 35555555555555544453 224555555 48
Q ss_pred HHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEe
Q psy15447 152 TSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVE 224 (457)
Q Consensus 152 a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e 224 (457)
++..++.+++++||.|++..+.|..+...++..|.++..++.. |++++++.+.. ++++|++.
T Consensus 118 al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~-----------~~k~i~l~ 186 (410)
T PRK06290 118 ALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKE-----------KAKLLYLN 186 (410)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcc-----------cceEEEEE
Confidence 8888999999999999999999988888888899988877642 56667666532 45677777
Q ss_pred cCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEE
Q psy15447 225 GVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCV 298 (457)
Q Consensus 225 ~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~ 298 (457)
+++||||.+.+ +++|.++|++||++||+||+|+...++.....+....+. .+.+|+++||||.+|.+| ||++
T Consensus 187 nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~--~~~~I~i~SfSK~~g~~GlRiG~ii 264 (410)
T PRK06290 187 YPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGA--KEVGVEIHSLSKAYNMTGWRLAFVV 264 (410)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCc--cccEEEEeechhhcCCchhheEeEE
Confidence 88999999999 678888999999999999999865553211122221111 234699999999998777 9999
Q ss_pred ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE
Q psy15447 299 GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL 378 (457)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i 378 (457)
+++++++.+......+.. +.+.+...++.++++..+..+..+++++++.+++.+.|++ .|+.+..+..+.++|+
T Consensus 265 ~~~~l~~~l~~~~~~~~~--~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~p~g~f~l~v 338 (410)
T PRK06290 265 GNELIVKAFATVKDNNDS--GQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNE----VGFKAEMPGGTFYLYV 338 (410)
T ss_pred eCHHHHHHHHHHHhcccc--CCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHh----CCCeecCCCeeeEEEE
Confidence 999999888654433222 2233444555555532111234677888899999999988 4777654455666677
Q ss_pred EecCCcchHHHHHHHHHHHHHHHHcCe-eEeccccCccccCCCCCeEEEEec-CCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 379 YLQKSDDEVASKKLLQTICDMCIQAGF-AITCPSHLDQEAKKQKPSIRITCN-ISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi-~v~~~~~~~~~~~~~~~~lRi~~~-~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
.++.............+++++|+++|+ .+.++.. .++++||+++ ...++++.++++++|++.+..+.
T Consensus 339 ~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~-------~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~~ 407 (410)
T PRK06290 339 KAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDD-------AGHFLRFSVTFEAKDEEEEDRILEEIKRRLSDVE 407 (410)
T ss_pred ECCCccccCCCCCCHHHHHHHHHHhCCEEEECCcc-------ccCeEEEEEEcccccccchhHHHHHHHHHHhhcc
Confidence 776431000000034579999998864 4444331 1368999985 45688999999999999988765
No 123
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.97 E-value=4.9e-27 Score=233.80 Aligned_cols=338 Identities=14% Similarity=0.123 Sum_probs=239.0
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCC--CCCCcccChHHHHHHHHHHHhhcCCC---cEEEecccHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSC--GPRGFYGTNVVHLDLENDIASFMGLE---ETALYSFGFSTS 153 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~--~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~ 153 (457)
+.-|+|.++.. . ..+.+.+++.+.+..+...+. .+....-..+..+++++.+++++|.+ .+++++++++++
T Consensus 16 ~~iyld~a~~~---~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l 91 (398)
T TIGR03392 16 GTVYLDSAATA---L-KPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESI 91 (398)
T ss_pred CeEEeeCcccc---C-CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHH
Confidence 35677777653 2 247789999888865422111 11010112345678999999999963 456667777898
Q ss_pred HHHHHhh----cCCCCEEEEeCcccHHHH----HHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEE
Q psy15447 154 ASAIAAY----VKRNDAVFVDENINFAIQ----TGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKF 220 (457)
Q Consensus 154 ~~ai~a~----~~~gd~v~~~~~~h~~~~----~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~ 220 (457)
..++.++ .++||.|++..+.|.+.. ..++..|.+++.++.+ |++++++.+.+ ++++
T Consensus 92 ~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~-----------~t~l 160 (398)
T TIGR03392 92 NLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTP-----------RTRI 160 (398)
T ss_pred HHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhcc-----------CceE
Confidence 8888877 478999999999987742 2346678888877643 67888877743 4578
Q ss_pred EEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEe
Q psy15447 221 IIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVG 299 (457)
Q Consensus 221 vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~ 299 (457)
|++.+++|++|.+.|+++|.++|++||+++++|++|+.|... ..+...++|+++.|.+|.+|+.| |+++.
T Consensus 161 v~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~gp~G~G~l~~ 231 (398)
T TIGR03392 161 LALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGP---------PDVQALDIDFYAFSGHKLYGPTGIGVLYG 231 (398)
T ss_pred EEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCC---------CChhhcCCCEEEEecccccCCCceEEEEE
Confidence 889999999999999999999999999999999999865431 11222346899899999888765 89999
Q ss_pred cHHHHHHHHhhCCc------------------cee-cCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhc
Q psy15447 300 SSYIIEHHRLSGSG------------------YCF-SASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQ 358 (457)
Q Consensus 300 ~~~~~~~~~~~~~~------------------~~~-~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~ 358 (457)
++++++.+.....+ ..| .++.+....++..++++.+.+. ....++..++.+++.+.|++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~ 311 (398)
T TIGR03392 232 KTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQ 311 (398)
T ss_pred cHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 98887765321100 111 1234555666667778776543 24567788889999998887
Q ss_pred ccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccc---cCCCCCeEEEEecCCCCHH
Q psy15447 359 HKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQE---AKKQKPSIRITCNISHTEQ 435 (457)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~---~~~~~~~lRi~~~~~~t~e 435 (457)
++++.+...+.++++.+.+... ...++.+.|.++||.++.+..+... .....+++|++++..+|++
T Consensus 312 ---l~g~~~~~~~~~~i~~~~~~~~--------~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ 380 (398)
T TIGR03392 312 ---LPGFRSFRCPGSSLLAFDFAGV--------HHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQ 380 (398)
T ss_pred ---CCCeEEeCCCCCcEEEEEeCCc--------CHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHH
Confidence 5688776555667777766532 3457888899999999877654310 0012468999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy15447 436 DMNSLIETLCKSHDIA 451 (457)
Q Consensus 436 di~~~~~~l~~~~~~~ 451 (457)
|+++++++|+++++.+
T Consensus 381 ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 381 DVDALVDAVGAALELL 396 (398)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999987653
No 124
>PRK07682 hypothetical protein; Validated
Probab=99.97 E-value=3.9e-27 Score=232.87 Aligned_cols=336 Identities=12% Similarity=0.111 Sum_probs=233.4
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----C-cEEEecccHHHHHH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----E-ETALYSFGFSTSAS 155 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~-~~i~~~sG~~a~~~ 155 (457)
..++|..+.+ .+...+.+.+++.+.+... .. .+....|..++..++++.+.+.+|. + ++++++++++|+..
T Consensus 21 ~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~-~~--~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~ 96 (378)
T PRK07682 21 GVISLGVGEP-DFVTPWNVREASIRSLEQG-YT--SYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDV 96 (378)
T ss_pred CeEEeCCCCC-CCCCCHHHHHHHHHHHhcC-CC--CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 4788887654 3334567888888877641 11 1111235556666666666554443 2 45666677899999
Q ss_pred HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447 156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM 228 (457)
Q Consensus 156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~ 228 (457)
++.+++++||.|++..++|..+...+...|.++..++. .|++++++.+.+ +++++++++++|
T Consensus 97 ~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----------~~~~v~~~~p~N 165 (378)
T PRK07682 97 AMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITA-----------KTKAILLCSPNN 165 (378)
T ss_pred HHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCc-----------ccEEEEEECCCC
Confidence 99999999999999999999888888888888776653 267778776642 356777778899
Q ss_pred CCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHH
Q psy15447 229 NSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSY 302 (457)
Q Consensus 229 ~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~ 302 (457)
|+|.+.+ +++|.++|++|++++|+||+|+...++.....+....+.. +.+++++||||.+|.+| ||++++++
T Consensus 166 PtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~--~~~i~~~S~SK~~~~~GlR~G~~~~~~~ 243 (378)
T PRK07682 166 PTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMR--ERTILISGFSKGFAMTGWRLGFIAAPVY 243 (378)
T ss_pred CcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhccccc--CCEEEEecCcccccChhhhhhhhhcCHH
Confidence 9999987 7899999999999999999998665543212222222221 23689999999998767 99999999
Q ss_pred HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh-hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEec
Q psy15447 303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ 381 (457)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~ 381 (457)
+++.+..... +. ..+.+++..+++.+.|+.-. ...++++.++++.+++.+.|++ .++.+..+..+.++|+.+.
T Consensus 244 ~i~~l~~~~~-~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~p~g~~~~~~~~~ 317 (378)
T PRK07682 244 FSEAMLKIHQ-YS-MMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNE----IGLTCHVPGGAFYAFPSIS 317 (378)
T ss_pred HHHHHHHHHH-hh-ccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH----CCCccCCCCeeEEEEEecc
Confidence 9998865432 11 12236666666666664211 1134567788899999999988 4666654445556666653
Q ss_pred C-CcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 382 K-SDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 382 ~-~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
. .. ...++++.|+ ++||.+.++..+. ...++++||++.. ++++++++++.|+++++.+
T Consensus 318 ~~~~-------~~~~~~~~ll~~~gv~v~pg~~f~---~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 318 STGL-------SSEEFAEQLLLEEKVAVVPGSVFG---ESGEGFIRCSYAT--SLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred CCCC-------CHHHHHHHHHHhCCEEEcCchhhC---cCCCCeEEEEeCC--CHHHHHHHHHHHHHHHhhc
Confidence 2 22 3457888876 6799999875432 1235799999974 7899999999999988654
No 125
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=3.1e-27 Score=232.06 Aligned_cols=319 Identities=12% Similarity=0.133 Sum_probs=231.0
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAI 157 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai 157 (457)
.+++||++|.+. ++.+|.+.+++.+.++..... ......++++.++++++.+ .+++++++++++..++
T Consensus 29 ~~~i~l~~n~~~-~~~~~~v~~a~~~~~~~~~~~---------p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~ 98 (359)
T PRK03158 29 EKIVKLASNENP-YGPSPKVKEAIAAHLDELALY---------PDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMIS 98 (359)
T ss_pred CceEEecCCCCC-CCCCHHHHHHHHHHHHHhhcC---------CCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHH
Confidence 478999987653 556889999999888753321 1123577889999998854 4555566668888888
Q ss_pred HhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC
Q psy15447 158 AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI 233 (457)
Q Consensus 158 ~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i 233 (457)
.+++++||.|++..++|..+.......|.++..++.. |++++++.+. ++++++++++++||+|.+
T Consensus 99 ~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~d~~~l~~~~~-----------~~~~~v~i~~p~NPtG~~ 167 (359)
T PRK03158 99 RALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLKDGGHDLEAMLKAID-----------EQTKIVWICNPNNPTGTY 167 (359)
T ss_pred HHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecCCCCcCHHHHHHhcC-----------CCCCEEEEeCCCCCCCCC
Confidence 8899999999999999988888888889888877643 5677766553 244677778899999999
Q ss_pred CChHHHHHHHHH--cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHH
Q psy15447 234 CPLKDILSLRSK--YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHR 308 (457)
Q Consensus 234 ~~l~~i~~l~~~--~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~ 308 (457)
.|.+++.++++. +|+++|+||+|....++..........+ ..+.+++++||||++|.+| ||+++++++++.+.
T Consensus 168 ~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~--~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~ 245 (359)
T PRK03158 168 VNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLE--KYENLIVLRTFSKAYGLAALRVGYGIASEELIEKLN 245 (359)
T ss_pred CCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHH--hcCCEEEEEechHhhcCcchhhehhcCCHHHHHHHH
Confidence 999999999887 5999999999976544321111111111 1223688999999998766 99999999998886
Q ss_pred hhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHH
Q psy15447 309 LSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVA 388 (457)
Q Consensus 309 ~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 388 (457)
..... + +.++++.+++.++++.-+..+..++.++++.+++.+.|++ .++.+. ++.+.++++.+..
T Consensus 246 ~~~~~--~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~-~~~g~~i~~~~~~------ 310 (359)
T PRK03158 246 IARPP--F--NTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKE----YGLFYY-PSQTNFIFVDTGR------ 310 (359)
T ss_pred HhcCC--C--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCCeeC-CCcCcEEEEECCC------
Confidence 54432 2 3477777777777642211223455666777788888877 366654 5567788877642
Q ss_pred HHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 389 SKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 389 ~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
...++++.|.++||.+.++..+ ..++++||+++ +++|+++++++|+++
T Consensus 311 ---~~~~~~~~l~~~gv~v~~g~~f-----~~~~~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 311 ---DANELFEALLKKGYIVRSGAAL-----GFPTGVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred ---CHHHHHHHHHHCCeEEeeCCCC-----CCCCeEEEecC---CHHHHHHHHHHHHHh
Confidence 2357889999999999987543 23579999986 899999999999875
No 126
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.96 E-value=2.4e-28 Score=238.03 Aligned_cols=324 Identities=18% Similarity=0.166 Sum_probs=227.3
Q ss_pred EeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCC
Q psy15447 84 NFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKR 163 (457)
Q Consensus 84 d~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~ 163 (457)
||+|.++++. +|.+.+++.+.+.... .|+..+...++++.+++++|.+..+++++|++++..++.+++++
T Consensus 1 ~~~~~~~~~~--~~~v~~a~~~~~~~~~--------~~~~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~~~ 70 (338)
T cd06502 1 DFRSDTVTGP--TPEMLEAMAAANVGDD--------VYGEDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQP 70 (338)
T ss_pred CcccccCCCC--CHHHHHHHHhcccCCc--------ccCCCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhcCC
Confidence 6889888774 6899999887653211 23456778999999999999778889999999999999999999
Q ss_pred CCEEEEeCcccHHHHH---HHHhcCCeEEEecC----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC--C
Q psy15447 164 NDAVFVDENINFAIQT---GLIASRCKVQYFKH----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI--C 234 (457)
Q Consensus 164 gd~v~~~~~~h~~~~~---~~~~~g~~~~~~~~----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i--~ 234 (457)
||.|+++.++|.+... ...+.|.++..++. .|++++++.+.+.... . .+++++|++++++|++|.. .
T Consensus 71 gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~i~~~~~~---~-~~~~~~v~l~~p~n~g~~~~~~ 146 (338)
T cd06502 71 GGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGENGKLTPEDLEAAIRPRDDI---H-FPPPSLVSLENTTEGGTVYPLD 146 (338)
T ss_pred CCeEEEecCcceeeecCCcHHHHcCceEEeecCCCCcCCHHHHHHHhhccCCC---c-CCcceEEEEEeecCCccccCHH
Confidence 9999999999876543 23457888887765 4788898888642100 0 0245788888888874432 3
Q ss_pred ChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccE-EEecHHHHHHHHhhCCc
Q psy15447 235 PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGF-CVGSSYIIEHHRLSGSG 313 (457)
Q Consensus 235 ~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~-v~~~~~~~~~~~~~~~~ 313 (457)
++++|+++|++||+++|+||+|..+..+..|.... ... .++|+++.|+||++|++||+ +++++++++.++.....
T Consensus 147 ~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~-~~~---~~~d~~~~s~sK~~~~~~g~~~~~~~~~~~~~~~~~~~ 222 (338)
T cd06502 147 ELKAISALAKENGLPLHLDGARLANAAAALGVALK-TYK---SGVDSVSFCLSKGGGAPVGAVVVGNRDFIARARRRRKQ 222 (338)
T ss_pred HHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHH-HHH---hcCCEEEEeccccCCCccceEEECCHHHHHHHHHHHHH
Confidence 37789999999999999999986543322222111 111 24578899999999876665 56788888887654322
Q ss_pred ceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHH
Q psy15447 314 YCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLL 393 (457)
Q Consensus 314 ~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 393 (457)
+..+.+.+++.++++.++|+.- ...+..+++.++.+++.+.|++ .++.+. ++.++++.+...... ...
T Consensus 223 ~~~~~~~~~~~~~a~~~~L~~~-~~~~~~~~~~~~~~~l~~~L~~----~~~~~~-~~~~~~~~v~~~~~~------~~~ 290 (338)
T cd06502 223 AGGGMRQSGFLAAAGLAALEND-LWLRRLRHDHEMARRLAEALEE----LGGLES-EVQTNIVLLDPVEAN------AVF 290 (338)
T ss_pred hCCChhhHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHh----cCCCcc-cccCCeEEEecCCcc------HHH
Confidence 2222334666667776666431 1223567888889999999988 344332 456777777664322 023
Q ss_pred HHHHHHHH---HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 394 QTICDMCI---QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 394 ~~~~~~l~---~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
.++.+.+. ++|+.+.+.. .+++|++++..+|++|++++++++++
T Consensus 291 ~~l~~~l~~~~~~gi~~~~~~---------~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 291 VELSKEAIERRGEGVLFYAWG---------EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHHHHHHhhhCCEEEEecC---------CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 34444443 6799987643 27899999999999999999999865
No 127
>PRK09082 methionine aminotransferase; Validated
Probab=99.96 E-value=3.7e-27 Score=233.48 Aligned_cols=335 Identities=14% Similarity=0.147 Sum_probs=236.4
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC-----cEEEecccHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE-----ETALYSFGFSTS 153 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-----~~i~~~sG~~a~ 153 (457)
++.++||..+.+ .+..++.+.+++.+.+..... .+....|..+++..+++.+.+++|.+ ..++++++++|+
T Consensus 29 ~~~~i~l~~g~~-~~~~~~~~~~~~~~~~~~~~~---~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al 104 (386)
T PRK09082 29 EHGAINLSQGFP-DFDGPPYLVEALAYAMAAGHN---QYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEAL 104 (386)
T ss_pred hCCEEEecCCCC-CCCCCHHHHHHHHHHHHcCCC---CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHH
Confidence 345789887643 444568888888887764211 22223467778888888888887752 355556678999
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY 227 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~ 227 (457)
..++.+++++||.|++..++|..+...++..|.++..++.+ |++++++.++. +++++++++++
T Consensus 105 ~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~-----------~~~~v~l~~p~ 173 (386)
T PRK09082 105 FAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISP-----------RTRLIILNTPH 173 (386)
T ss_pred HHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCc-----------cceEEEEeCCC
Confidence 99999999999999999999999999999999998887753 56777776642 35677788889
Q ss_pred CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCC-CCccccccCCCCCCccEEEecCcccccCcc---cEEEec
Q psy15447 228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGST-GHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGS 300 (457)
Q Consensus 228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~-g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~ 300 (457)
||+|.+.+ +++|.++|++||+++|+||+|+...++.. +..+....+. .+..++++||||.+|.+| ||++++
T Consensus 174 NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~--~~~~i~~~S~SK~~~~~G~RiG~iv~~ 251 (386)
T PRK09082 174 NPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPEL--RERAFVVSSFGKTYHVTGWKVGYCVAP 251 (386)
T ss_pred CCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCc--cCcEEEEeechhhccchhhhhhhhhCC
Confidence 99998865 78899999999999999999986655421 2222232222 133699999999998777 999999
Q ss_pred HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH-HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEE
Q psy15447 301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHL-LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLY 379 (457)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~-~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~ 379 (457)
+++++.++.......++ .+.+...++.+.++. -+...++++.++++.+.+.+.|++ .++++..+..+.++|+.
T Consensus 252 ~~l~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~~~g~~~~~~~ 325 (386)
T PRK09082 252 AALSAEFRKVHQYNTFT--VNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALAN----SRFKLLPCEGTYFQLVD 325 (386)
T ss_pred HHHHHHHHHHHhhhcCC--CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh----CCCcccCCCeeEEEEEe
Confidence 99998886643222333 345444444444431 111123566778899999999988 56776544556677777
Q ss_pred ecC--CcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 380 LQK--SDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 380 ~~~--~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
++. +. ...+++++|. ++||.+.++..+.. .+...+++|++++. +++++++.++.|++
T Consensus 326 ~~~~~~~-------~~~~~~~~l~~~~~v~v~pg~~f~~-~~~~~~~~Ri~~~~--~~~~l~~~~~rl~~ 385 (386)
T PRK09082 326 YSAISDL-------DDVEFCQWLTREHGVAAIPLSVFYA-DPFPHRLVRLCFAK--QEETLDAAAERLCQ 385 (386)
T ss_pred ccccCCC-------CHHHHHHHHHHhCCEEEeCcHHhCC-CCCCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 753 22 3457888864 66999998763211 01235789999974 78899999988864
No 128
>PLN02721 threonine aldolase
Probab=99.96 E-value=1.7e-27 Score=233.44 Aligned_cols=330 Identities=15% Similarity=0.169 Sum_probs=226.3
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY 160 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~ 160 (457)
+++||++|.+. . .+|.+.+++.+. ..+.. . ++..+...+|++.+++++|.+..+++++|++++..++.++
T Consensus 6 ~~~~~~~~~~~-~-~~~~~~~a~~~~--~~~~~----~--~~~~~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~~~ 75 (353)
T PLN02721 6 RVVDLRSDTVT-K-PTDAMRAAMANA--EVDDD----V--LGYDPTALRLEEEMAKIFGKEAALFVPSGTMGNLISVLVH 75 (353)
T ss_pred hhhhhhccccc-C-CCHHHHHHHHhc--cCCCc----c--cCCCHHHHHHHHHHHHHhCCceeEEecCccHHHHHHHHHH
Confidence 67899987664 3 478888887653 11111 1 1234557899999999999988999999999988888888
Q ss_pred cC-CCCEEEEeCcccHHHHH---HHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCC-CCC
Q psy15447 161 VK-RNDAVFVDENINFAIQT---GLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY-MNS 230 (457)
Q Consensus 161 ~~-~gd~v~~~~~~h~~~~~---~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~-~~~ 230 (457)
++ +||.|+++.++|.+... .....|.++..++. .|++++++.+++.... ..+++++|++++++ +++
T Consensus 76 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~----~~~~~~~v~l~~~~~np~ 151 (353)
T PLN02721 76 CDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDD----HFPTTRLICLENTHANCG 151 (353)
T ss_pred ccCCCCeEEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCC----CCCcceEEEEeccccccC
Confidence 87 99999999999876655 35566888877764 3789999988743210 01245788887765 568
Q ss_pred CCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCccc-EEEecHHHHHH
Q psy15447 231 ADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGG-FCVGSSYIIEH 306 (457)
Q Consensus 231 G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG-~v~~~~~~~~~ 306 (457)
|.+.| +++|.++|++||+++|+||+|.++.....+... .+. ...+|.++.|+||+++++.| ++++++++++.
T Consensus 152 G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~---~~~-~~~~d~~~~s~sK~l~~~~G~~~~~~~~~~~~ 227 (353)
T PLN02721 152 GRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPV---HRL-VKAADSVSVCLSKGLGAPVGSVIVGSKSFIRK 227 (353)
T ss_pred CccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCH---HHH-hhhCCEEEEecccccCCceeeEEecCHHHHHh
Confidence 88877 789999999999999999998765322111111 111 12457878899999986544 57788888877
Q ss_pred HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEE-eccCCCCeEEEEecCC--
Q psy15447 307 HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLV-QGHRDTPLKYLYLQKS-- 383 (457)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~i~~~~~-- 383 (457)
+......+..+....+..+++++.+++.. .+..++..++.+++.+.|++ ..++.+ ...+.++++++.+...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (353)
T PLN02721 228 AKRLRKTLGGGMRQVGVLAAAALVALQEN---VPKLEDDHKKAKLLAEGLNQ---IKGLRVNVAAVETNIVYFDITDGSR 301 (353)
T ss_pred HHHHHHhcCCCeehhHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHh---CCCcEEecCCccceEEEEEccCCcc
Confidence 54322111111111223334444444322 12344456778899999988 456644 3344566777777542
Q ss_pred cchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 384 DDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 384 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
. ....++++|.++||.+.+.. .+++|++++..++++|+++++++|++++..
T Consensus 302 ~-------~~~~~~~~L~~~gi~v~~~~---------~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 302 I-------TAEKLCKSLEEHGVLLMPGN---------SSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred c-------cHHHHHHHHHhCCcEEecCC---------CceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 2 35679999999999998753 468999999899999999999999987654
No 129
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=4.2e-27 Score=231.76 Aligned_cols=319 Identities=12% Similarity=0.116 Sum_probs=226.3
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----CC----CcEEEecccHHH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----GL----EETALYSFGFST 152 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~----~~~i~~~sG~~a 152 (457)
..+|++.|.+ .++..|.+.+++.+.+.........++. .| ..+|++.+++++ |. ++++++++++++
T Consensus 27 ~~i~l~~~~~-~~~~~~~~~~al~~~l~~~~~~~~~Y~~-~g----~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~ 100 (368)
T PRK03317 27 VPVRLNTNEN-PYPPSPALVADIAEAVAEAAAGLNRYPD-RD----AVALRADLAAYLTAQTGVGLTVENVWAANGSNEI 100 (368)
T ss_pred ceeEecCCCC-CCCCCHHHHHHHHHHHhhhhhhhccCCC-Cc----hHHHHHHHHHHhhhhccCCCChhhEEECCCHHHH
Confidence 4688887754 3455788999999887642111111111 12 355666666665 42 344555555689
Q ss_pred HHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447 153 SASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY 227 (457)
Q Consensus 153 ~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~ 227 (457)
+..++.+++++||.|++..++|..+....+..|.++..++. .|++++++.+++ .+.+++++++++
T Consensus 101 l~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~----------~~~~~i~l~~p~ 170 (368)
T PRK03317 101 LQQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAE----------HRPDVVFLTSPN 170 (368)
T ss_pred HHHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhc----------cCCCEEEEeCCC
Confidence 99999999999999999999999888888888888776652 268888888764 233566777899
Q ss_pred CCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCC-ccccccCCCCCCccEEEecCcccccCcc---cEEEecHHH
Q psy15447 228 MNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGH-GVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYI 303 (457)
Q Consensus 228 ~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~-~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~ 303 (457)
||+|.+.+.+++.++|+.++++||+||+|+.... .|. ......+..+ ..|+++||||++|.+| ||+++++++
T Consensus 171 NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~--~~~~~~~~~~~~~~--~~i~~~SfSK~~g~~GlRiG~~~~~~~~ 246 (368)
T PRK03317 171 NPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRR--SGTPSALTLLPEYP--RLVVSRTMSKAFAFAGGRLGYLAAAPAV 246 (368)
T ss_pred CCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcc--cCCcCHHHHHHhCC--CEEEEEechhhhccchhhhhhhhCCHHH
Confidence 9999999999999999999999999999975322 222 2223323222 2478899999998777 999999999
Q ss_pred HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE-EecC
Q psy15447 304 IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL-YLQK 382 (457)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i-~~~~ 382 (457)
++.++..... + +.+++.++++.++++..+...+.+++++++.+.+.+.|++ .|+.+. .+.++++.+ .+.
T Consensus 247 ~~~l~~~~~~--~--~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~~~~~~~~~- 316 (368)
T PRK03317 247 VDALRLVRLP--Y--HLSAVTQAAARAALRHADELLASVAALRAERDRVVAWLRE----LGLRVA-PSDANFVLFGRFA- 316 (368)
T ss_pred HHHHHhcCCC--C--CCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH----CCCEeC-CCCCcEEEEeccC-
Confidence 9988754422 2 3477888888788765433334456677888888888887 577665 344554433 222
Q ss_pred CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 383 SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 383 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
....+.+.|+++||++++... ++++||+++ +++++++++++++++++
T Consensus 317 ---------~~~~~~~~l~~~Gv~v~~~~~--------~~~iRi~~~---~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 317 ---------DRHAVWQGLLDRGVLIRDVGI--------PGWLRVTIG---TPEENDAFLAALAEVLA 363 (368)
T ss_pred ---------CHHHHHHHHHHCCEEEEeCCC--------CCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 235788899999999986432 479999975 78999999999998865
No 130
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.96 E-value=8e-27 Score=232.49 Aligned_cols=338 Identities=13% Similarity=0.105 Sum_probs=239.4
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCC--CCCCcccChHHHHHHHHHHHhhcCC-C--cEEEecccHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSC--GPRGFYGTNVVHLDLENDIASFMGL-E--ETALYSFGFSTS 153 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~--~~~~~~g~~~~~~~l~~~la~~~g~-~--~~i~~~sG~~a~ 153 (457)
+.-|+|-++.. . ..+.+.+++.+.+..+...+. .........+..+++++.+++++|. + .+++++|+++++
T Consensus 19 ~~~yld~a~~~---~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i 94 (401)
T PRK10874 19 AGVYLDSAATA---L-KPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESI 94 (401)
T ss_pred ceEEEeCCccc---C-CCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHH
Confidence 34577766643 2 246788999888876432111 1111112356678899999999997 3 355666777888
Q ss_pred HHHHHhh----cCCCCEEEEeCcccHHHH----HHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEE
Q psy15447 154 ASAIAAY----VKRNDAVFVDENINFAIQ----TGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKF 220 (457)
Q Consensus 154 ~~ai~a~----~~~gd~v~~~~~~h~~~~----~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~ 220 (457)
..++.++ .++||.|++..+.|.+.. ...+..|.++..++. .|++++++.+. +++++
T Consensus 95 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-----------~~t~l 163 (401)
T PRK10874 95 NLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELIT-----------PRTRI 163 (401)
T ss_pred HHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcC-----------cCcEE
Confidence 8888887 378999999999987643 234567888877764 26778887774 34578
Q ss_pred EEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEe
Q psy15447 221 IIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVG 299 (457)
Q Consensus 221 vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~ 299 (457)
|++.+++|++|.+.|+++|.++|+++|+++|+|++|+.|.+. .++...++|+++.|++|.+|+.| |+++.
T Consensus 164 v~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~G~G~l~~ 234 (401)
T PRK10874 164 LALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFP---------ADVQALDIDFYAFSGHKLYGPTGIGVLYG 234 (401)
T ss_pred EEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCccccccc---------CCchhcCCCEEEEecccccCCCccEEEEE
Confidence 889999999999999999999999999999999999865432 12222346899999999888765 89899
Q ss_pred cHHHHHHHHhhC------------------Ccceec-CCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhc
Q psy15447 300 SSYIIEHHRLSG------------------SGYCFS-ASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQ 358 (457)
Q Consensus 300 ~~~~~~~~~~~~------------------~~~~~~-~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~ 358 (457)
++++++.+.... .++.|. ++.+....++..++++.+.+. ....++.+++.+++.+.|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~ 314 (401)
T PRK10874 235 KSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAK 314 (401)
T ss_pred chHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 988877653211 011121 234545666666777776543 23567777888999999887
Q ss_pred ccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccc---cCCCCCeEEEEecCCCCHH
Q psy15447 359 HKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQE---AKKQKPSIRITCNISHTEQ 435 (457)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~---~~~~~~~lRi~~~~~~t~e 435 (457)
++|+.+..++.++++.+.+... ...++.+.|.++||.++++..+... .....+.+|++++..+|++
T Consensus 315 ---~~g~~~~~~~~~~i~~~~~~~~--------~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~e 383 (401)
T PRK10874 315 ---LPGFRSFRCQDSSLLAFDFAGV--------HHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQS 383 (401)
T ss_pred ---CCCEEEeCCCCCcEEEEEECCc--------CHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHH
Confidence 5688776556677777776542 2357888899999999887654210 0112478999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy15447 436 DMNSLIETLCKSHDIA 451 (457)
Q Consensus 436 di~~~~~~l~~~~~~~ 451 (457)
|+++++++|+++++.+
T Consensus 384 did~ll~al~~~~~~~ 399 (401)
T PRK10874 384 DVDALVNAVDRALELL 399 (401)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999987754
No 131
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.1e-26 Score=231.11 Aligned_cols=339 Identities=13% Similarity=0.138 Sum_probs=234.9
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----CC----CcEEEecccH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----GL----EETALYSFGF 150 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~----~~~i~~~sG~ 150 (457)
+.+++||..+++ .+..++++.+++.+.+.+....+ ....| ..+|++.+++++ |. ++.+++++++
T Consensus 30 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y---~~~~g----~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 101 (393)
T PRK05764 30 GRDVISLGAGEP-DFDTPEHIKEAAIEALDDGKTKY---TPAAG----IPELREAIAAKLKRDNGLDYDPSQVIVTTGAK 101 (393)
T ss_pred cCCEEEeCCCCC-CCCCCHHHHHHHHHHHhcCCCCc---CCCCC----hHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcH
Confidence 456889988765 44557889999888886522211 11123 345555555554 32 3466777778
Q ss_pred HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447 151 STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIV 223 (457)
Q Consensus 151 ~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~ 223 (457)
+|+..++.+++++||.|+++.++|..+...++..|.++..++.+ |++.+++.++. .++++++
T Consensus 102 ~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-----------~~~~v~~ 170 (393)
T PRK05764 102 QALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITP-----------KTKALIL 170 (393)
T ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCc-----------cceEEEE
Confidence 99999999999999999999999998888888889988877753 46777777632 3467778
Q ss_pred ecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCC-CCccccccCCCCCCccEEEecCcccccCcc---cE
Q psy15447 224 EGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGST-GHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GF 296 (457)
Q Consensus 224 e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~-g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~ 296 (457)
.+++||+|.+.+ +++|.++|++||+++|+||+|+...++.. ....... ..+..+.+++++||||.+|.+| ||
T Consensus 171 ~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~SK~~~~~G~RiG~ 249 (393)
T PRK05764 171 NSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASL-SPELRDRTITVNGFSKAYAMTGWRLGY 249 (393)
T ss_pred ECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHc-CCCCcCCEEEEecCcccccCccceeEE
Confidence 888999999987 67899999999999999999976555321 1122111 0111234789999999998666 99
Q ss_pred EEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH-HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCe
Q psy15447 297 CVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHL-LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPL 375 (457)
Q Consensus 297 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~-~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~ 375 (457)
+++++++++.+...... ++.+.+++.+.++.+.++. .+..++++++++++.+.+.+.|++ .+++.+..+..+.+
T Consensus 250 i~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~g~~~~~~~g~~~ 324 (393)
T PRK05764 250 AAGPKELIKAMSKLQSH--STSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNE---IPGLECPKPEGAFY 324 (393)
T ss_pred EecCHHHHHHHHHHHhh--cccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhh---CCCCcccCCCcceE
Confidence 99999999888654322 2223467776666666641 111234667778888889999988 34777664445566
Q ss_pred EEEEecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 376 KYLYLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 376 ~~i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+++.+....... .....++.+.|++ +||.+.++..+ ...+++|+++. ++++++++++++|.+++++.
T Consensus 325 ~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~f-----~~~~~vRis~~--~~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 325 VFPNVSKLLGKS--ITDSLEFAEALLEEAGVAVVPGIAF-----GAPGYVRLSYA--TSLEDLEEGLERIERFLESL 392 (393)
T ss_pred EEEecccccccc--cCCHHHHHHHHHHhCCEEEcccccc-----CCCCEEEEEec--CCHHHHHHHHHHHHHHHHhh
Confidence 777665432000 0013577777764 69999887542 22689999986 48999999999999988754
No 132
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.96 E-value=1.1e-26 Score=231.38 Aligned_cols=330 Identities=14% Similarity=0.089 Sum_probs=227.9
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCC-CCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGP-RGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASA 156 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~-~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~a 156 (457)
.-|+|.++.. . .++.+.+++.+.+..++..+.+. ....+..+..+++++.+++++|.+ .+++.+++++++..+
T Consensus 18 ~~yl~~~~~~---~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~ 93 (397)
T TIGR01976 18 RVFFDNPAGT---Q-IPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLL 93 (397)
T ss_pred eEEecCCccC---C-CCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHH
Confidence 3566665532 2 35789999999988754332221 111233466789999999999964 355556666776655
Q ss_pred HHhh---cCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447 157 IAAY---VKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIV 223 (457)
Q Consensus 157 i~a~---~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~ 223 (457)
+.++ .++||.|++..+.|.+... ..+..|.++..++.+ |++++++.+. +++++|++
T Consensus 94 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~-----------~~~~lv~i 162 (397)
T TIGR01976 94 SRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLS-----------PRTRLVAV 162 (397)
T ss_pred HHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcC-----------CCceEEEE
Confidence 5554 6899999999998877643 345678888776542 5777777764 24579999
Q ss_pred ecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHH
Q psy15447 224 EGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYI 303 (457)
Q Consensus 224 e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~ 303 (457)
++++|++|.+.|+++|.++|++||+++|+||+|+.|.. . .++...++|++++|++|++|...|++++++++
T Consensus 163 ~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~------~---~~~~~~~~d~~~~s~~K~~g~~~G~l~~~~~~ 233 (397)
T TIGR01976 163 TAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHG------L---IDVQATGADFLTCSAYKFFGPHMGILWGRPEL 233 (397)
T ss_pred eCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhcccc------C---CCHHHcCCCEEEEechhhcCCceEEEEEcHHH
Confidence 99999999999999999999999999999999865421 1 12222356899999999999878999999988
Q ss_pred HHHHHhhCCcce-------e-cCCCcHHHHHHHHHHHHHHhhC----------------cHHHHHHHHHHHHHHHHhhcc
Q psy15447 304 IEHHRLSGSGYC-------F-SASLPPFLAVAANKALHLLKAN----------------PSLLTKLREKCNTMHSLLSQH 359 (457)
Q Consensus 304 ~~~~~~~~~~~~-------~-~~~~~~~~~aaa~a~l~~~~~~----------------~~~~~~l~~~~~~l~~~L~~~ 359 (457)
++.+......+. | .++.+....++..++++.+.+. +...++..++.+++++.|++
T Consensus 234 ~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~- 312 (397)
T TIGR01976 234 LMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSD- 312 (397)
T ss_pred HhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 877653322221 1 1233444555556677766432 12345566778888888887
Q ss_pred cccCCeEEecc----CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc------ccCCCCCeEEEEec
Q psy15447 360 KVTQRFLVQGH----RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ------EAKKQKPSIRITCN 429 (457)
Q Consensus 360 ~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~------~~~~~~~~lRi~~~ 429 (457)
+.++.+..+ ..++++.+.+... ...++.++|.++||.++.+..+.. ..+...+++|++++
T Consensus 313 --~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~ 382 (397)
T TIGR01976 313 --LPGVTLYGVARLAARVPTVSFTVHGL--------PPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLA 382 (397)
T ss_pred --CCCEEEeCCCCccCCCceEEEEeCCc--------CHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEee
Confidence 445777543 2466777666532 345789999999999986543210 00112468999999
Q ss_pred CCCCHHHHHHHHHHH
Q psy15447 430 ISHTEQDMNSLIETL 444 (457)
Q Consensus 430 ~~~t~edi~~~~~~l 444 (457)
..+|++|+++++++|
T Consensus 383 ~~~t~~di~~l~~~l 397 (397)
T TIGR01976 383 HYNTAEEVDRLLEAL 397 (397)
T ss_pred ccCCHHHHHHHHHhC
Confidence 999999999999874
No 133
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=2e-26 Score=226.56 Aligned_cols=329 Identities=14% Similarity=0.209 Sum_probs=228.0
Q ss_pred Cee-eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC-cEEEecccH-HHHHH
Q psy15447 79 GIP-CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE-ETALYSFGF-STSAS 155 (457)
Q Consensus 79 G~~-~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG~-~a~~~ 155 (457)
|+. +++++.|.. +++.+|.+.+++.+.+... .+ |+.. ...+|++++|++++.+ +.+++++|+ +++..
T Consensus 30 g~~~~~~l~~~~~-~~~~~~~~~~a~~~~~~~~-~~-------Y~~~-~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~ 99 (369)
T PRK08153 30 GRPFRARIGANES-GFGPSPSVIAAMREAAAEI-WK-------YGDP-ENHDLRHALAAHHGVAPENIMVGEGIDGLLGL 99 (369)
T ss_pred CCcceeEecCCCC-CCCCCHHHHHHHHHHHHHh-hc-------CCCC-ccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHH
Confidence 444 569988754 6667789999988876541 11 1111 1578999999999864 345555555 67778
Q ss_pred HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC
Q psy15447 156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC 234 (457)
Q Consensus 156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~ 234 (457)
++.+++++||.|+++.++|......+...|.++..++. ++..++++.++.... .+++++++.+++||+|.+.
T Consensus 100 ~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~~~~~~l~~~~~~-------~~~~~i~l~~P~NPtG~~~ 172 (369)
T PRK08153 100 IVRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDREDLDALLDAARR-------ENAPLVYLANPDNPMGSWH 172 (369)
T ss_pred HHHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCCCCCHHHHHHHhcc-------cCCcEEEEeCCCCCCCCCC
Confidence 88888999999999999999888878888888887764 333333333332211 3456777778899999999
Q ss_pred ChHHHHHHHHHc--CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHh
Q psy15447 235 PLKDILSLRSKY--QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRL 309 (457)
Q Consensus 235 ~l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~ 309 (457)
+.+++.++++.+ +++||+||+|+....+ +. ...+... ....++++||||++|.+| ||+++++++++.+..
T Consensus 173 ~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~--~~--~~~~~~~-~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~ 247 (369)
T PRK08153 173 PAADIVAFIEALPETTLLVLDEAYCETAPA--GA--APPIDTD-DPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDK 247 (369)
T ss_pred CHHHHHHHHHhCCCCcEEEEeCchhhhcCc--cc--chhhhhc-CCCEEEEecchHhccCcchheeeeecCHHHHHHHHH
Confidence 988877777654 8999999998743222 21 1111111 122588999999998777 999999999988765
Q ss_pred hCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHH
Q psy15447 310 SGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVAS 389 (457)
Q Consensus 310 ~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 389 (457)
.... + +.++++++++.++++.-+...+.++.++++.+++.+.|++ .|+.+. +..++++++.+..+.
T Consensus 248 ~~~~--~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~----~g~~~~-p~~~~f~~~~~~~~~----- 313 (369)
T PRK08153 248 VRNH--F--GMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARA----NGLTPL-PSATNFVAIDCGRDG----- 313 (369)
T ss_pred hhcC--C--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCCccC-CCcCcEEEEECCCCc-----
Confidence 4422 2 3577787888777742111123566677788888888877 566543 566778887764321
Q ss_pred HHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 390 KKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 390 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
..+.++.++|.++||.++.... ....+++|+++. +++|+++++++|+++++..+
T Consensus 314 -~~a~~l~~~l~~~Gi~v~~p~~-----~~~~~~iRis~~---~~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 314 -AFARAVLDGLIARDIFVRMPGV-----APLDRCIRVSCG---PDEELDLFAEALPEALEAAR 367 (369)
T ss_pred -ccHHHHHHHHHHCCeEEeeCCC-----CCCCCeEEEecC---CHHHHHHHHHHHHHHHHHhh
Confidence 0456899999999999953221 123469999986 79999999999999987554
No 134
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.96 E-value=2.2e-26 Score=227.90 Aligned_cols=334 Identities=13% Similarity=0.141 Sum_probs=226.9
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----Cc-EEEecccHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EE-TALYSFGFSTS 153 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~-~i~~~sG~~a~ 153 (457)
|..++||..+++ .+...+.+.+++.+.+..... ..+....|..++...+++.+.+.+|. +. +++++++++++
T Consensus 28 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l 104 (383)
T TIGR03540 28 GVDVISLGIGDP-DLPTPKHIVEALCKAAENPEN--HRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGI 104 (383)
T ss_pred CCCeEEeCCCCC-CCCCCHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHH
Confidence 567889988765 444567888888887754211 11222234445555555555544443 33 34445566899
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV 226 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v 226 (457)
..++.+++++||.|+++.++|..........|.++..++.+ |++++++.+. .++++|++.++
T Consensus 105 ~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~-----------~~~~~v~i~~P 173 (383)
T TIGR03540 105 AHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA-----------KKAKLMFINYP 173 (383)
T ss_pred HHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhcc-----------ccceEEEEeCC
Confidence 99999999999999999999998888888889888877642 4566665553 24567777788
Q ss_pred CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC-CCccEEEecCcccccCcc---cEEEe
Q psy15447 227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST-EEVDMIIGSLEHALGSVG---GFCVG 299 (457)
Q Consensus 227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~-~~~Di~~~s~sK~lg~~g---G~v~~ 299 (457)
+||+|.+.+ +++|.++|++||+++|+||+|+...+.. ........+.. .+.+|+++||||.+|.+| ||+++
T Consensus 174 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~--~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~ 251 (383)
T TIGR03540 174 NNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDG--YKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVG 251 (383)
T ss_pred CCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCC--CCCcCcccCCCcccCEEEEEecccccCCccceeeEEeC
Confidence 999999999 6899999999999999999997654432 11111111111 234588999999998776 99999
Q ss_pred cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE
Q psy15447 300 SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL 378 (457)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i 378 (457)
++++++.+....... ..+.+.....++.++++...+ .+++++.++++.+.+.+.|++ .++.+..+..+.++++
T Consensus 252 ~~~l~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~~~~~~~~~~ 325 (383)
T TIGR03540 252 NADLIAGLGKVKTNV--DSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKK----IGIDVEKPKATFYVWV 325 (383)
T ss_pred CHHHHHHHHHHHHhc--ccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCEecCCCcceEEEE
Confidence 999988876543221 122344444555555533111 134567788889999999988 4777664555667888
Q ss_pred EecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 379 YLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
.+++.. ...+++++|+ ++||.+.++..+.. ...+++||+++ .+++++++.++.|++
T Consensus 326 ~l~~~~-------~~~~~~~~ll~~~gi~v~~g~~f~~---~~~~~~Ris~~--~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 326 PVPEGY-------TSAEFAARLLEETGVVVTPGVGFGE---YGEGYIRISLT--VPDERLEEAVARIKK 382 (383)
T ss_pred ECCCCC-------CHHHHHHHHHHHCCEEEecchhhCc---cCCCeEEEEec--CCHHHHHHHHHHHhh
Confidence 886543 4567888876 57999998764321 22478999996 467888888777653
No 135
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.96 E-value=2.7e-26 Score=228.90 Aligned_cols=335 Identities=13% Similarity=0.119 Sum_probs=237.1
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCC-CCCC-CcccChHHHHHHHHHHHhhcCC-C--cEEEecccHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGS-CGPR-GFYGTNVVHLDLENDIASFMGL-E--ETALYSFGFSTSA 154 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~-~~~~-~~~g~~~~~~~l~~~la~~~g~-~--~~i~~~sG~~a~~ 154 (457)
.-|+|.++..+ ..+.+.+++.+.+.++...+ .+.. ...-..+...++++.+++++|. + .+++++++++++.
T Consensus 24 ~iYld~a~~~~----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~ 99 (406)
T PRK09295 24 LAYLDSAASAQ----KPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGIN 99 (406)
T ss_pred eEEEeCccccc----CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHH
Confidence 46777776533 25678999988887543211 1111 0111345677899999999985 2 4566666678888
Q ss_pred HHHHh----hcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447 155 SAIAA----YVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFI 221 (457)
Q Consensus 155 ~ai~a----~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~v 221 (457)
.++.+ ..++||.|++....|.+... ..+..|.++..++.+ |++++++.+. +++++|
T Consensus 100 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-----------~~t~lv 168 (406)
T PRK09295 100 LVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFD-----------ERTRLL 168 (406)
T ss_pred HHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcC-----------CCcEEE
Confidence 77765 45889999999988876532 234568888777643 6788877764 245788
Q ss_pred EEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEec
Q psy15447 222 IVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGS 300 (457)
Q Consensus 222 i~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~ 300 (457)
++.+++|++|.+.|+++|.++|+++|+++++|++|+.|... .++...++|+++.|++|.+|+.| |+++.+
T Consensus 169 ~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~ 239 (406)
T PRK09295 169 AITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHP---------VDVQALDCDFYVFSGHKLYGPTGIGILYVK 239 (406)
T ss_pred EEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccc---------cCchhcCCCEEEeehhhccCCCCcEEEEEc
Confidence 89999999999999999999999999999999999876431 22323456899999999888665 888888
Q ss_pred HHHHHHHHhhCCc-------------------cee-cCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhc
Q psy15447 301 SYIIEHHRLSGSG-------------------YCF-SASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQ 358 (457)
Q Consensus 301 ~~~~~~~~~~~~~-------------------~~~-~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~ 358 (457)
+++++.+.....+ ..| .++.+....++..++++++.+. +...++.+++.+++++.|++
T Consensus 240 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 319 (406)
T PRK09295 240 EALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLES 319 (406)
T ss_pred hHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 8877654311000 111 2345666777777888887653 45667888899999999988
Q ss_pred ccccCCeEEeccC-CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc---ccCCCCCeEEEEecCCCCH
Q psy15447 359 HKVTQRFLVQGHR-DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ---EAKKQKPSIRITCNISHTE 434 (457)
Q Consensus 359 ~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~---~~~~~~~~lRi~~~~~~t~ 434 (457)
++++.+.++. ..+++.+.++.. ...++.+.|.++||.++.+..+.. .....++.+|++++..+|+
T Consensus 320 ---~~~~~~~~~~~~~~iv~~~~~~~--------~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~ 388 (406)
T PRK09295 320 ---VPDLTLYGPQNRLGVIAFNLGKH--------HAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTH 388 (406)
T ss_pred ---CCCEEEeCCCCCceEEEEEECCc--------CHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCH
Confidence 5688776542 356776666543 334677888889999987655432 0111235899999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy15447 435 QDMNSLIETLCKSHD 449 (457)
Q Consensus 435 edi~~~~~~l~~~~~ 449 (457)
+|||+++++|+++..
T Consensus 389 ~did~l~~~l~~i~~ 403 (406)
T PRK09295 389 EEVDRLVAGLQRIHR 403 (406)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998754
No 136
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.96 E-value=1.6e-26 Score=226.04 Aligned_cols=328 Identities=13% Similarity=0.124 Sum_probs=227.1
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CC-cEEEecccHHHHHH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LE-ETALYSFGFSTSAS 155 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~-~~i~~~sG~~a~~~ 155 (457)
+++||+++++ .+...+++.+++.+...... .+....|..++...+++.+.+..| .+ ++++++++++++..
T Consensus 1 ~~~~~~~g~p-~~~~~~~~~~~~~~~~~~~~----~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~ 75 (350)
T TIGR03537 1 RLFDFGTGDP-KEPTPPFIRKALIDAVPEVS----QYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFH 75 (350)
T ss_pred CeEeccCCCC-CCCCCHHHHHHHHHHHhccC----CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHH
Confidence 4678888765 45556788888887654311 122223444555555555554445 22 34545555688888
Q ss_pred HHHhhcCCC---CEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEec
Q psy15447 156 AIAAYVKRN---DAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEG 225 (457)
Q Consensus 156 ai~a~~~~g---d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~ 225 (457)
++.+++++| |.|+++.++|..+...+...|.++..++.+ |++++++.+.+ +++++++.+
T Consensus 76 ~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-----------~~~~i~i~~ 144 (350)
T TIGR03537 76 FPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILE-----------ETKIVWINY 144 (350)
T ss_pred HHHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhh-----------ccEEEEEeC
Confidence 888888887 699999999999999999999998877642 67788777653 346777778
Q ss_pred CCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEe
Q psy15447 226 VYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVG 299 (457)
Q Consensus 226 v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~ 299 (457)
++||+|.+.+ +++|.++|++||+++|+||+|+...++....... ...++ ..|+++|+||.+|.+| ||+++
T Consensus 145 p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~---~~~~~-~~i~~~s~SK~~g~~GlRiG~~~~ 220 (350)
T TIGR03537 145 PHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSAL---EVGIE-NVLAFHSLSKRSGMTGYRSGFVAG 220 (350)
T ss_pred CCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchh---hcCcC-CEEEEeecccccCCccccceeeec
Confidence 9999999999 8899999999999999999987554443211111 11222 3588999999997665 99999
Q ss_pred cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEE
Q psy15447 300 SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLY 379 (457)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~ 379 (457)
++++++.++.....+ +.+.+++..+++.+++.......+.+++++++.+.+.+.|++ .|+.+..+..+.++++.
T Consensus 221 ~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~----~g~~~~~~~g~~~~~~~ 294 (350)
T TIGR03537 221 DEKLISFLRKLRANF--GVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNK----VGLEYLYPDATFYLWVK 294 (350)
T ss_pred CHHHHHHHHHHHHhh--ccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCeEEEEEEE
Confidence 998888887543332 333355555555555432111134567788888899898888 56666544456667888
Q ss_pred ecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 380 LQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
++... ...++++.|.++||.+.++..+. ....+++|+++. .++++++++++.+++
T Consensus 295 ~~~~~-------~~~~l~~~L~~~gv~v~~g~~f~---~~~~~~~Ri~~~--~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 295 VPSGI-------DAKDYALRLLENGIVVAPGENFG---SGEEGYVRVALV--PTLEECEEALRLWER 349 (350)
T ss_pred CCCCC-------CHHHHHHHHHHCCEEEcCchhhC---CCCCCEEEEEec--CCHHHHHHHHHHHhc
Confidence 76543 35689999999999998865431 122578999985 578999999988865
No 137
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2.5e-26 Score=227.21 Aligned_cols=335 Identities=10% Similarity=0.072 Sum_probs=233.9
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSAS 155 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ 155 (457)
++.++|+++.+.. .+..+|.+.+++.+++...... .|+......++++.+++++|.+ .+++++++++++..
T Consensus 26 ~~~~~i~l~~~~~-~~~~~~~~~~a~~~~~~~~~~~------~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~ 98 (380)
T PRK06225 26 KDKEMIWMGQNTN-HLGPHEEVREAMIRCIEEGEYC------KYPPPEGFPELRELILKDLGLDDDEALITAGATESLYL 98 (380)
T ss_pred hcCCeEEccCCCC-CCCCCHHHHHHHHHHHhcCCCC------CCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHH
Confidence 3467899987643 3456799999999988752211 1222333578999999998854 56778888899999
Q ss_pred HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447 156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY 227 (457)
Q Consensus 156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~ 227 (457)
++.+++++||.|++..+.|......+...|.++++++. .|++++++.+.. +++++++.+++
T Consensus 99 ~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~-----------~~~~v~l~~p~ 167 (380)
T PRK06225 99 VMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDE-----------NTRLIYLIDPL 167 (380)
T ss_pred HHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCC-----------CceEEEEeCCC
Confidence 99999999999999999888777777788888877653 256777766532 34677666788
Q ss_pred CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecH
Q psy15447 228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSS 301 (457)
Q Consensus 228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~ 301 (457)
||+|.+.+ +++|.++|++||+++|+||+|+....+ .... ..+.+ +.++++.||||.+|.+| ||+++++
T Consensus 168 NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~---~~~~--~~~~~-~~~i~~~s~SK~~g~~G~RiG~i~~~~ 241 (380)
T PRK06225 168 NPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFARE---HTLA--AEYAP-EHTVTSYSFSKIFGMAGLRIGAVVATP 241 (380)
T ss_pred CCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhcc---CCch--hhcCC-CCEEEEeechhhcCCccceeEEEecCH
Confidence 99999887 789999999999999999998632221 1111 12223 33588899999998665 9999999
Q ss_pred HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEE-eccCCCCeEEEE
Q psy15447 302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLV-QGHRDTPLKYLY 379 (457)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~i~ 379 (457)
++++.++.... ..+ +.+.+.++++.++++...+. +..++.++++.+.+.+.|++ ++++.+ ..++.+.++++.
T Consensus 242 ~l~~~~~~~~~-~~~--~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~g~~~~~~ 315 (380)
T PRK06225 242 DLIEVVKSIVI-NDL--GTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDE---IEGVFLPVYPSHGNMMVID 315 (380)
T ss_pred HHHHHHHHHHh-ccc--CCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHh---CcCCccccCCCCCeEEEEE
Confidence 99988765431 122 33666666666665432111 22344556667777788876 344322 124557788887
Q ss_pred ecCC-cchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 380 LQKS-DDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 380 ~~~~-~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
+... . ...+++++|.++||.++++.++.. ..+.+++|+++. .+++++++++++|++++++++.
T Consensus 316 ~~~~~~-------~~~~l~~~l~~~gi~v~~g~~~~~--~~~~~~iR~s~~--~~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 316 ISEAGI-------DPEDLVEYLLERKIFVRQGTYTSK--RFGDRYIRVSFS--IPREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred cccccC-------CHHHHHHHHHHCCEEEcCCcccCc--CCCCceEEEEeC--CCHHHHHHHHHHHHHHHHHhhc
Confidence 7542 2 345788999999999988654321 123568999986 4799999999999999998775
No 138
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.96 E-value=2.8e-26 Score=225.14 Aligned_cols=290 Identities=17% Similarity=0.167 Sum_probs=214.3
Q ss_pred hHHHHHHHHHHHhhcCCC--c-EEEecccHHHHHHHHHhhcCCCCEEEEeCcccHH--HHHHHHhcCCeEEEec-----C
Q psy15447 124 NVVHLDLENDIASFMGLE--E-TALYSFGFSTSASAIAAYVKRNDAVFVDENINFA--IQTGLIASRCKVQYFK-----H 193 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~--~-~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~--~~~~~~~~g~~~~~~~-----~ 193 (457)
.+...++++.+++++|.+ . ++++++|++|+..++.+++++||.|++....|.+ .....+..|.++..++ .
T Consensus 31 ~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 110 (356)
T cd06451 31 LALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVEKPWGEA 110 (356)
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEeecCCCCC
Confidence 466889999999999973 3 4667788999999999999999999998877765 3455677788877765 3
Q ss_pred CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccC
Q psy15447 194 NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFG 273 (457)
Q Consensus 194 ~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~ 273 (457)
.|++++++.+.+ .++++|++.++++++|.+.|+++|.++|++||+++++|++|++|... +.
T Consensus 111 ~~~~~l~~~i~~----------~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~---------~~ 171 (356)
T cd06451 111 VSPEEIAEALEQ----------HDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEP---------FR 171 (356)
T ss_pred CCHHHHHHHHhc----------cCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCcc---------cc
Confidence 478888888854 24467777788889999999999999999999999999999875421 11
Q ss_pred CCCCCccEEEecCcccccCc-c-cEEEecHHHHHHHHh--hCCcc---------------eecCCCcHHHHHHHHHHHHH
Q psy15447 274 VSTEEVDMIIGSLEHALGSV-G-GFCVGSSYIIEHHRL--SGSGY---------------CFSASLPPFLAVAANKALHL 334 (457)
Q Consensus 274 ~~~~~~Di~~~s~sK~lg~~-g-G~v~~~~~~~~~~~~--~~~~~---------------~~~~~~~~~~~aaa~a~l~~ 334 (457)
+...++|++++|++|+++.+ | |+++.++++++.+.. ...++ ..+++.++...+++.++++.
T Consensus 172 ~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~ 251 (356)
T cd06451 172 MDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDL 251 (356)
T ss_pred ccccCccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHH
Confidence 11234588999999999753 3 899999988877653 11111 12233455555666777777
Q ss_pred HhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC--CC-eEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEe
Q psy15447 335 LKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD--TP-LKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAIT 408 (457)
Q Consensus 335 ~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~--~~-~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~ 408 (457)
+... +...++.+++.+++.+.|++ .|+++..++. ++ +.++.++... ...++++.|.++ ||.++
T Consensus 252 l~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~L~~~~gI~~~ 320 (356)
T cd06451 252 ILEEGLENRWARHRRLAKALREGLEA----LGLKLLAKPELRSPTVTAVLVPEGV-------DGDEVVRRLMKRYNIEIA 320 (356)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHH----cCCeeccCcccCCCceEEEECCCCC-------CHHHHHHHHHHhCCEEEe
Confidence 6543 35677888899999999988 4776653322 33 3345544333 456899999999 99998
Q ss_pred ccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 409 CPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 409 ~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
++..+ ..++++|++++..+|++|+++++++|++++
T Consensus 321 ~g~~~-----~~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 321 GGLGP-----TAGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred ccccc-----ccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 76532 224699999999999999999999999875
No 139
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.96 E-value=2.4e-26 Score=227.94 Aligned_cols=339 Identities=13% Similarity=0.089 Sum_probs=224.8
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEE-ecccHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETAL-YSFGFST 152 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~-~~sG~~a 152 (457)
+|+.++||..+.. .+...+.+.+++.+.+..... ..+....|..++.+.+++.+.+..| .++.++ ++++.++
T Consensus 28 ~~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~a 104 (388)
T PRK07366 28 AGKELIDLSLGSS-DLPAPAHALEAIAQSLHDPST--HGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEG 104 (388)
T ss_pred cCCCeEEeCCCCC-CCCCCHHHHHHHHHHHhCccc--CCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHH
Confidence 4678899988754 455568899999887754211 1122223444444445544444334 232344 4555689
Q ss_pred HHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEec
Q psy15447 153 SASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEG 225 (457)
Q Consensus 153 ~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~ 225 (457)
+..++.+++++||.|++..++|..+...++..|.++..++.. |++++++.+. .+++++++.+
T Consensus 105 l~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-----------~~~k~i~l~~ 173 (388)
T PRK07366 105 TAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVL-----------AQARLMVLSY 173 (388)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhc-----------ccceEEEEeC
Confidence 999999999999999999999999988889999998877643 2344444332 2346777888
Q ss_pred CCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCC-CccEEEecCcccccCcc---cEEE
Q psy15447 226 VYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTE-EVDMIIGSLEHALGSVG---GFCV 298 (457)
Q Consensus 226 v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~-~~Di~~~s~sK~lg~~g---G~v~ 298 (457)
++||||.+.+ +++|.++|++||++||+||+|....+... ..........+. ...|+++||||++|.+| ||++
T Consensus 174 p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~-~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v 252 (388)
T PRK07366 174 PHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGE-VEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAI 252 (388)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCC-CCCCChhhCCCCcccEEEEeecccccCCcchhheehc
Confidence 9999999998 56778899999999999999986554321 001111222222 23478899999998665 9999
Q ss_pred ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEE
Q psy15447 299 GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL-KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKY 377 (457)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~-~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 377 (457)
+++++++.+......+..+ .++....++.+++... +..++.++.++++.+++.+.|++ .++.+..+..+.++|
T Consensus 253 ~~~~li~~l~~~~~~~~~~--~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~----~~~~~~~p~~g~f~~ 326 (388)
T PRK07366 253 GNAQLIQALRQVKAVVDFN--QYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQ----IGWPVPLPEATMYVW 326 (388)
T ss_pred CCHHHHHHHHHHHhhcccC--CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCeeEEEE
Confidence 9999998886544333222 2232333444444211 11134677788888999999988 466555466788888
Q ss_pred EEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 378 LYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 378 i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
+.++..... ...++++.|+ ++||.+.++..+. ....+++||+++ .++++++++++.|+++
T Consensus 327 ~~~~~~~~~-----~~~~~~~~l~~~~gv~v~pg~~f~---~~~~~~iRi~~~--~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 327 AKLPEPWQG-----NSVEFCTQLVAQTGVAASPGSGFG---KSGEGYVRFALV--HDPDILEEAVERIAAF 387 (388)
T ss_pred EECCcccCC-----CHHHHHHHHHHhCCEEEeCchHhC---cCCCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 887653100 2346777774 6699999875421 122479999987 4799999999998765
No 140
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=3.9e-26 Score=223.70 Aligned_cols=334 Identities=16% Similarity=0.151 Sum_probs=246.1
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCC--CCCCCcccChHHHHHHHHHHHhhcCCC--c-EEEecccHHHHHH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGS--CGPRGFYGTNVVHLDLENDIASFMGLE--E-TALYSFGFSTSAS 155 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~--~~~~~~~g~~~~~~~l~~~la~~~g~~--~-~i~~~sG~~a~~~ 155 (457)
-|+|.+... . .+..+.+++.+...+|.-.. ..+....-..+..++.++.+++++|.+ + ++|+.+.++++..
T Consensus 24 vylD~aa~~---~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~ 99 (405)
T COG0520 24 VYLDNAATS---Q-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNL 99 (405)
T ss_pred EEecCcccc---c-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHH
Confidence 355555432 1 25679999999887664322 222222223567888999999999965 3 4555566688887
Q ss_pred HHHhh---cCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447 156 AIAAY---VKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIV 223 (457)
Q Consensus 156 ai~a~---~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~ 223 (457)
+..++ .++||.|++....|.+.... .+..|+++.+++.+ ++++++..+. +++++|.+
T Consensus 100 va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~-----------~~Tklvai 168 (405)
T COG0520 100 VARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLIT-----------PKTKLVAL 168 (405)
T ss_pred HHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcC-----------CCceEEEE
Confidence 77777 68999999999998875433 33447888888754 4677777543 57899999
Q ss_pred ecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcc-cEEEecH
Q psy15447 224 EGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVG-GFCVGSS 301 (457)
Q Consensus 224 e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~g-G~v~~~~ 301 (457)
.++.|.+|.+.|+++|.++||++|+++++|.+|+.|.+. .++...++|+++.|.+|++ |+.| |++.+++
T Consensus 169 s~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~---------idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~ 239 (405)
T COG0520 169 SHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLP---------IDVQELGCDFLAFSGHKWLLGPTGIGVLYVRK 239 (405)
T ss_pred ECccccccccchHHHHHHHHHHcCCEEEEECccccCccC---------CCchhcCCCEEEEcccccccCCCceEEEEEch
Confidence 999999999999999999999999999999999987542 3444457799999999966 5545 8999999
Q ss_pred HHHHHHHhhC-------------------Ccceec-CCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcc
Q psy15447 302 YIIEHHRLSG-------------------SGYCFS-ASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQH 359 (457)
Q Consensus 302 ~~~~~~~~~~-------------------~~~~~~-~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~ 359 (457)
++.+.+.+.. .++.|- ++.+.....+..++++++++. .+..++.+++.+++.+.|++
T Consensus 240 ~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~- 318 (405)
T COG0520 240 ELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSE- 318 (405)
T ss_pred HHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc-
Confidence 9998873211 111121 233444444445778877664 45778888999999999998
Q ss_pred cccCCeEEeccC---CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc---ccCCCCCeEEEEecCCCC
Q psy15447 360 KVTQRFLVQGHR---DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ---EAKKQKPSIRITCNISHT 433 (457)
Q Consensus 360 ~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~---~~~~~~~~lRi~~~~~~t 433 (457)
++++.+.+++ ..+++.+.++.. ...++...|.++||.++.+.+|.. ........+|++++.++|
T Consensus 319 --~~~v~i~g~~~~~r~~~vsF~v~~~--------~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt 388 (405)
T COG0520 319 --LPGVEIYGPPDADRGGIVSFNVKGI--------HPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNT 388 (405)
T ss_pred --CCCeEEecCCcccCceEEEEEeCCC--------CHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCC
Confidence 7889988765 578888888765 356899999999999998877653 111223459999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy15447 434 EQDMNSLIETLCKSHD 449 (457)
Q Consensus 434 ~edi~~~~~~l~~~~~ 449 (457)
++|||+++++|+++.+
T Consensus 389 ~edid~l~~aL~~~~~ 404 (405)
T COG0520 389 EEDVDRLLEALKKALA 404 (405)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998764
No 141
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=9.8e-27 Score=228.05 Aligned_cols=320 Identities=14% Similarity=0.134 Sum_probs=226.9
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSAS 155 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ 155 (457)
+++.++|++.|.. .++.+|.+++++.+.+..... + ...-..+|++.++++++.+ .+++++++++++..
T Consensus 27 ~~~~~i~l~~nen-~~~~~~~v~~a~~~~~~~~~~----Y-----p~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~ 96 (366)
T PRK01533 27 GDHSFVKLASNEN-PFGCSPRVLDELQKSWLDHAL----Y-----PDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQI 96 (366)
T ss_pred CCCceEEeCCCCC-CCCCCHHHHHHHHHHHHhcCc----C-----CCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHH
Confidence 3567899988754 455578999999887655221 1 1122467889999988854 34555555688899
Q ss_pred HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447 156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA 231 (457)
Q Consensus 156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G 231 (457)
++.+++++||.|++..++|..+...+...|.++..++.+ |++++++.+++ +++++++++++||||
T Consensus 97 ~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~d~~~l~~~~~~-----------~~~~v~i~~P~NPTG 165 (366)
T PRK01533 97 ISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALNNGVYDLDEISSVVDN-----------DTKIVWICNPNNPTG 165 (366)
T ss_pred HHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecCCCCcCHHHHHHHhCc-----------CCcEEEEeCCCCCCC
Confidence 999999999999999999999998899999998887653 67888776642 345777778999999
Q ss_pred CCCChHHHHHH---HHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHH
Q psy15447 232 DICPLKDILSL---RSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIE 305 (457)
Q Consensus 232 ~i~~l~~i~~l---~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~ 305 (457)
.+.+.+++.++ |++++ ++|+||+|............... +...+..|+++||||.+|.+| ||+++++++++
T Consensus 166 ~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~--~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~~ 242 (366)
T PRK01533 166 TYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPL--LEKHKNILVLRTFSKAYGLASFRVGYAVGHEELIE 242 (366)
T ss_pred CCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHH--hccCCCEEEEeCchHHhcChHHHHhHHhCCHHHHH
Confidence 99996655555 55555 67789998643322100111111 111223589999999998766 99999999999
Q ss_pred HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc
Q psy15447 306 HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD 385 (457)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 385 (457)
.++..... .+.+.++..++.++|+.-+..++.++..+++.+++.+.++. .|+.+. ++.++++++.+.+
T Consensus 243 ~l~~~~~~----~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~----~g~~~~-~~~~nf~~~~~~~--- 310 (366)
T PRK01533 243 KLNVVRLP----FNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKE----NEIPFY-QSQTNFIFLPVEN--- 310 (366)
T ss_pred HHHHhcCC----CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCccC-CCcCcEEEEeCCC---
Confidence 88754322 24577777777777642111123455666677777777777 466654 5578888887742
Q ss_pred hHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 386 EVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 386 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
..++.+.|+++||.+++. ++++||++. +.+|+++++++|+++++..+.
T Consensus 311 -------~~~~~~~l~~~GI~Vr~~----------~~~iRis~~---~~~~~~~l~~al~~~~~~~~~ 358 (366)
T PRK01533 311 -------GGEIYEACAHAGFIIRPF----------PNGVRITVG---TREQNEGVISVLQQHFENKKR 358 (366)
T ss_pred -------HHHHHHHHHHCCcEEccC----------CCceEEeCC---CHHHHHHHHHHHHHHHHhccc
Confidence 236889999999999862 268999986 799999999999998876654
No 142
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.96 E-value=3.4e-26 Score=226.76 Aligned_cols=334 Identities=14% Similarity=0.156 Sum_probs=224.5
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEe-cccHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALY-SFGFSTS 153 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~-~sG~~a~ 153 (457)
|.+++|++.+++ .+...+.+.+++.+.+..... ..+....|..++...+++.+.+..|. ++.+++ +++++++
T Consensus 30 ~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i 106 (385)
T PRK09276 30 GVDVISLGIGDP-DLPTPDHIIEAMCKAVEDPEN--HQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGI 106 (385)
T ss_pred CCCEEEecCCCC-CCCCCHHHHHHHHHHHhCCCC--CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence 566889988764 344567888888888764211 11222234444555555555444352 233444 5556899
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV 226 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v 226 (457)
..++.+++++||.|++..++|..+...++..|.++..++.. |++++++.+. .++++|+++++
T Consensus 107 ~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~-----------~~~~~v~l~~p 175 (385)
T PRK09276 107 AHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA-----------KKAKLMFINYP 175 (385)
T ss_pred HHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc-----------ccceEEEEeCC
Confidence 99999999999999999999988888888889888876542 4556655443 24567777788
Q ss_pred CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC-CCccEEEecCcccccCcc---cEEEe
Q psy15447 227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST-EEVDMIIGSLEHALGSVG---GFCVG 299 (457)
Q Consensus 227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~-~~~Di~~~s~sK~lg~~g---G~v~~ 299 (457)
+||||.+.+ +++|.++|++||+++|+||+|....++. .........+. .+.+|+++||||.+|.+| ||+++
T Consensus 176 ~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~ 253 (385)
T PRK09276 176 NNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDG--YKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVG 253 (385)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCC--CCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeC
Confidence 999999998 5788889999999999999997654431 11111111211 234588999999998776 99999
Q ss_pred cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE
Q psy15447 300 SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL 378 (457)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i 378 (457)
++++++.+....... ..+.++....++.+.+...+. .++.+++++++.+++.+.|++ .++.+..+..+.++++
T Consensus 254 ~~~l~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~v 327 (385)
T PRK09276 254 NADLIAGLGKVKSNV--DSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRK----LGLEVEPPKATFYVWA 327 (385)
T ss_pred CHHHHHHHHHHHhhc--cCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh----CCCcccCCCcceEEEE
Confidence 999998886543221 222344455555555532111 134567788888999999988 4676654455666788
Q ss_pred EecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 379 YLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
.++... ...+++++|++ +||.+.++..+. ....+++||+++ .+++++.++++.|.+
T Consensus 328 ~~~~~~-------~~~~l~~~ll~~~gi~v~~g~~f~---~~~~~~~Ris~~--~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 328 PVPKGY-------TSAEFATLLLDKAGVVVTPGNGFG---EYGEGYFRIALT--VPDERIEEAVERIKK 384 (385)
T ss_pred ECCCCC-------CHHHHHHHHHHhCCEEECCchhhC---CCCCCeEEEEeC--CCHHHHHHHHHHHhh
Confidence 876543 34578888874 799999875432 122469999996 477888888777653
No 143
>PRK08068 transaminase; Reviewed
Probab=99.96 E-value=3.3e-26 Score=226.96 Aligned_cols=334 Identities=14% Similarity=0.153 Sum_probs=224.2
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----C-cEEEecccHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----E-ETALYSFGFSTS 153 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~-~~i~~~sG~~a~ 153 (457)
|..++||+.+++ ++..+|.+.+++.+.+..... ..+....|..++..++++.+.+..|. + ++++++++++++
T Consensus 31 ~~~~i~l~~~~p-~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l 107 (389)
T PRK08068 31 GHDVINLGQGNP-DQPTPEHIVEALQEAAENPAN--HKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGL 107 (389)
T ss_pred CCCeEEecCCCC-CCCCCHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHH
Confidence 457899988765 444467888988888764211 11111234444444444444333352 3 355666777888
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV 226 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v 226 (457)
..++.+++++||.|+++.++|..+...+...|.++..++.+ |++++++.+. .++++|++.++
T Consensus 108 ~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-----------~~~~~v~l~~P 176 (389)
T PRK08068 108 VELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVA-----------EKAKLMYLNYP 176 (389)
T ss_pred HHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhcc-----------ccceEEEEECC
Confidence 88899999999999999999999888889999988877653 3556665553 23467777778
Q ss_pred CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCC-CccccccCCCCCCccEEEecCcccccCcc---cEEEe
Q psy15447 227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTG-HGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVG 299 (457)
Q Consensus 227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g-~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~ 299 (457)
+||||.+.+ +++|.++|++||+++|+||+|+...+.... ..+....+. .+..|+++||||.+|.+| ||+++
T Consensus 177 ~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~--~~~~i~~~S~SK~~g~~GlRiG~~~~ 254 (389)
T PRK08068 177 NNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGA--KDVGIELYTLSKTFNMAGWRVAFAVG 254 (389)
T ss_pred CCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCc--cCCEEEEecchhccCCccceeEeEec
Confidence 999999999 468888999999999999998643332111 111122221 223588999999998777 99999
Q ss_pred cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH-HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE
Q psy15447 300 SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHL-LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL 378 (457)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~-~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i 378 (457)
++++++.+......+ ..+.++....++.+++.. -+..+.++++++++.+.+.+.|++ .|+.+..+.++.++++
T Consensus 255 ~~~l~~~l~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~----~g~~~~~~~g~~~~~v 328 (389)
T PRK08068 255 NESVIEAINLLQDHL--FVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACRE----IGWEVDAPKGSFFAWM 328 (389)
T ss_pred CHHHHHHHHHHHhhc--cCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCeeEEEEE
Confidence 999998886554332 223344444444444421 111134677888889999999988 4666553444566788
Q ss_pred EecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 379 YLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
.++... ...++++.|++ +||.+.++..+. ..+.+++||++. ..++.+.+.++.|++
T Consensus 329 ~~~~~~-------~~~~~~~~l~~~~gi~v~pg~~f~---~~~~~~iRi~~~--~~~~~l~~al~~l~~ 385 (389)
T PRK08068 329 PVPKGY-------TSEQFADLLLEKAHVAVAPGNGFG---EHGEGYVRVGLL--TDEERLREAVERIGK 385 (389)
T ss_pred ECCCCC-------CHHHHHHHHHHhCCEEEecchHhC---ccCCCeEEEEEc--CCHHHHHHHHHHHHH
Confidence 876543 34679999986 599998875431 123579999996 366777777777664
No 144
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=2.3e-26 Score=226.09 Aligned_cols=317 Identities=14% Similarity=0.146 Sum_probs=220.3
Q ss_pred CCeeeEEeecCC-ccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccH-HHH
Q psy15447 78 NGIPCINFATHN-YLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGF-STS 153 (457)
Q Consensus 78 ~G~~~id~~s~~-~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~-~a~ 153 (457)
++++++||++|. +++ ..|.+.+++.+.+..+.. +. .....++++.+++++|.+ ..+++++|+ +++
T Consensus 32 ~~~~~i~l~~~~~~~~--~~~~~~~~~~~~~~~~~~-y~--------~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i 100 (361)
T PRK00950 32 DPESIIKLGSNENPLG--PSPKAVEAIEKELSKIHR-YP--------EPDAPELREALSKYTGVPVENIIVGGDGMDEVI 100 (361)
T ss_pred CccceEEccCCCCCCC--CCHHHHHHHHHHHHhhcC-CC--------CCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHH
Confidence 567899999874 444 468899998887765321 11 112488999999999864 345546665 667
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM 228 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~ 228 (457)
..++.+++++||.|+++.+.|..+...++..|.++..++. .|++++++.+.. +++++++++++|
T Consensus 101 ~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-----------~~~~v~~~~p~n 169 (361)
T PRK00950 101 DTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLDVDSVLNAITE-----------KTKVIFLCTPNN 169 (361)
T ss_pred HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhcc-----------CCCEEEEeCCCC
Confidence 7888888899999999999888877778888988887752 257777776632 345777778899
Q ss_pred CCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHH
Q psy15447 229 NSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIE 305 (457)
Q Consensus 229 ~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~ 305 (457)
|+|.+.|.+++.++|+++|+++|+||+|+... +.....+... .+. .++++||||++|.+| ||+++++++++
T Consensus 170 ptG~~~~~~~l~~l~~~~~~~li~De~y~~~~-~~~~~~~~~~----~~~-vi~~~S~SK~~g~~GlRiG~~~~~~~~~~ 243 (361)
T PRK00950 170 PTGNLIPEEDIRKILESTDALVFVDEAYVEFA-EYDYTPLALE----YDN-LIIGRTFSKVFGLAGLRIGYGFVPEWLID 243 (361)
T ss_pred CCCCCcCHHHHHHHHHHCCcEEEEECchhhhC-ccchHHHHHh----cCC-EEEEEeehHhhcCchhhcchhcCCHHHHH
Confidence 99999999999999999999999999996432 2111111111 122 488899999998776 99999999988
Q ss_pred HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc
Q psy15447 306 HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD 385 (457)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 385 (457)
.++.....+ +.+++..+++.++++..+..++.+++++++.+++.+.|. +.+. ++.++++++.+.. .
T Consensus 244 ~~~~~~~~~----~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~-------~~~~-~~~~~~i~~~~~~-~- 309 (361)
T PRK00950 244 YYMRAKTPF----SLTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP-------FKVY-PSEANFVLVDVTP-M- 309 (361)
T ss_pred HHHHhcCCC----CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC-------eeEC-CCcceEEEEECCC-C-
Confidence 887554332 245666666666653211112233444444444444432 3343 4567788887733 2
Q ss_pred hHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 386 EVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 386 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
...++++.|.++||.++++..+. ...++++|++++ +.+|+++++++|++++
T Consensus 310 ------~~~~~~~~l~~~gv~v~~~~~f~---~~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 310 ------TAKEFCEELLKRGVIVRDCTSFR---GLGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred ------CHHHHHHHHHHCCEEEeeCCccC---CCCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 45679999999999998754211 123568999986 7899999999998875
No 145
>PRK07324 transaminase; Validated
Probab=99.96 E-value=3.2e-26 Score=225.40 Aligned_cols=330 Identities=12% Similarity=0.104 Sum_probs=231.1
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC---CCcEEEecccHHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG---LEETALYSFGFSTSA 154 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~ 154 (457)
.|..+++++-+.+. +...+.+ +++.+++.+....++. ..| ..+|++.++++++ .+++++++++++|+.
T Consensus 24 ~~~~~~~~~~~e~~-~~~~~~~-~~~~~~~~~~~~~Y~~---~~G----~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~ 94 (373)
T PRK07324 24 AESCIDSLTLEELL-ALAGKNP-EAFYQELGQKKLTYGW---IEG----SPEFKEAVASLYQNVKPENILQTNGATGANF 94 (373)
T ss_pred ccCCCCCCcHHHHH-hccCcch-HHHHHHHhcCCccCCC---CCC----CHHHHHHHHHHhcCCChhhEEEcCChHHHHH
Confidence 45667777655543 2234556 8888887763333221 123 3577888888764 345677777789999
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY 227 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~ 227 (457)
.++.+++++||.|+++.++|......++..|.++..++. .|++++++.+. ++++++++++++
T Consensus 95 ~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~-----------~~~kli~i~~p~ 163 (373)
T PRK07324 95 LVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVR-----------PNTKLICINNAN 163 (373)
T ss_pred HHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCC-----------CCCcEEEEeCCC
Confidence 999999999999999999999988888889988887764 25677766553 245688888999
Q ss_pred CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecH
Q psy15447 228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSS 301 (457)
Q Consensus 228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~ 301 (457)
||+|.+.+ +++|.++|++||+++|+||+|+...++. . ........ +..|+++||||.+|.+| ||+++++
T Consensus 164 NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~--~-~~s~~~~~--~~~I~~~s~SK~~~~~G~RiG~i~~~~ 238 (373)
T PRK07324 164 NPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDG--S-TPSIADLY--EKGISTNSMSKTYSLPGIRVGWIAANE 238 (373)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC--C-CCChhhcc--CCEEEEecchhhcCCccceeEEEecCH
Confidence 99999998 8899999999999999999987543332 1 11111221 12488999999998766 9999999
Q ss_pred HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447 302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL 380 (457)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~ 380 (457)
++++.++........+ .+++...++..+++..+. .+..++.++++.+.+.+.|++ .+++.+..+..+...++.+
T Consensus 239 ~li~~~~~~~~~~~~~--~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~---~~~~~~~~p~gg~~~~i~~ 313 (373)
T PRK07324 239 EVIDILRKYRDYTMIC--AGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAK---EPRVSYVKPKAVSTSFVKL 313 (373)
T ss_pred HHHHHHHHHhCcEEec--CChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhc---CCCceEECCCceEEEEEEe
Confidence 9998887654333333 355555555555542211 123456667778888888877 3566665555556667776
Q ss_pred cCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 381 QKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+... ...+++++|+ ++||.+.++..+ ..++++||++.. +++.+++.++.|++++++.
T Consensus 314 ~~~~-------~~~~~~~~ll~~~gv~v~pg~~F-----~~~~~iRis~~~--~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 314 DVDM-------PSEDFCLKLLKETGVLLVPGNRF-----DLEGHVRIGYCC--DTETLKKGLKKLSEFLREF 371 (373)
T ss_pred CCCC-------CHHHHHHHHHHhcCEEEECcccc-----CCCCeEEEEecC--CHHHHHHHHHHHHHHHHhc
Confidence 6443 3457888876 569999987643 235799999864 6899999999999988753
No 146
>PRK12414 putative aminotransferase; Provisional
Probab=99.96 E-value=4.3e-26 Score=225.58 Aligned_cols=337 Identities=16% Similarity=0.157 Sum_probs=230.7
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-----CcEEEecccHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-----EETALYSFGFSTS 153 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-----~~~i~~~sG~~a~ 153 (457)
+..++||..+.+ .+...+.+.+++.+.+.+ +. ..+....|..++++++++.+++++|. ++++++++|++++
T Consensus 28 ~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~-~~--~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al 103 (384)
T PRK12414 28 QHDALNLSQGAP-NFAPDPALVEGVARAMRD-GH--NQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGL 103 (384)
T ss_pred hCCeEEcCCCCC-CCCCCHHHHHHHHHHHHh-CC--CCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHH
Confidence 346789988754 455578899998887764 21 12222346678888888888888775 2477777888999
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY 227 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~ 227 (457)
..++.+++.+||.|++..++|..+...++..|.++..++.. |++.+++.++ +++++|++++++
T Consensus 104 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-----------~~~~~v~i~~p~ 172 (384)
T PRK12414 104 YAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAIT-----------PRTRMIIVNTPH 172 (384)
T ss_pred HHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcC-----------cccEEEEEcCCC
Confidence 99999999999999999999988888888888888776642 5677776663 245677778899
Q ss_pred CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccC-CCCccccccCCCCCCccEEEecCcccccCcc---cEEEec
Q psy15447 228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGS-TGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGS 300 (457)
Q Consensus 228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~-~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~ 300 (457)
||+|.+.+ +++|.++|++||+++|+||+|+...+.. ....+..+.+. .+..|+++||||.+|.+| ||++++
T Consensus 173 NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~--~~~~i~~~SfSK~~~~pGlRiG~~v~~ 250 (384)
T PRK12414 173 NPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHREL--AERSVIVSSFGKSYHVTGWRVGYCLAP 250 (384)
T ss_pred CCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCc--cCcEEEEecccccccCccceEEEEecC
Confidence 99999976 6788889999999999999998655432 11112221122 122489999999998766 999999
Q ss_pred HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447 301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL 380 (457)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~ 380 (457)
+++++.+........++. +.+...++.+.++.-....+.++.++++.+.+.+.|++ .|+.+..+.++.++|+.+
T Consensus 251 ~~l~~~l~~~~~~~~~~~--s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~~~~~~~gg~~~~~~~ 324 (384)
T PRK12414 251 AELMDEIRKVHQFMVFSA--DTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAG----SRFELLPSEGSFFMLARF 324 (384)
T ss_pred HHHHHHHHHHHhheecCC--CcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHh----CCCeecCCCcceEEEEcc
Confidence 999888765432222332 44444444444421111123567788899999999988 467665444556666666
Q ss_pred cCCcchHHHHHHHHHHH-HHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 381 QKSDDEVASKKLLQTIC-DMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 381 ~~~~~~~~~~~~~~~~~-~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
...... ...+++ +.|.++||.+.++..+.. .....+++||+++. +++++++.++.|.+
T Consensus 325 ~~~~~~-----~~~~~~~~~l~~~gV~v~pg~~f~~-~~~~~~~iRis~~~--~~~~~~~~~~rl~~ 383 (384)
T PRK12414 325 RHFSDE-----SDSDFVLRLIRDARVATIPLSAFYT-DGTDTGLIRLSFSK--DDATLVEGARRLCS 383 (384)
T ss_pred cccCCC-----CHHHHHHHHHHhCCEEEecchhhcC-CCCCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 431000 123455 455678999998764321 01124789999984 68999999888764
No 147
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.96 E-value=5.3e-26 Score=226.86 Aligned_cols=336 Identities=15% Similarity=0.170 Sum_probs=233.8
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhc-CCCCCCCCC-cccChHHHHHHHHHHHhhcCCC---cEEEecccHHHHHH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKN-GVGSCGPRG-FYGTNVVHLDLENDIASFMGLE---ETALYSFGFSTSAS 155 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~-~~~~~~~~~-~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~ 155 (457)
-|+|.++.. . ..+.+.+++.+.++.. +....+... ..-..+..+++++.+++++|.+ .+++++++++++..
T Consensus 20 ~yld~~~~~---~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~ 95 (403)
T TIGR01979 20 VYLDSAATS---Q-KPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINL 95 (403)
T ss_pred EEEeCcccc---C-CCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHH
Confidence 466666542 2 2467888888877653 111111110 0112345678999999999965 45666667788777
Q ss_pred HHHhh----cCCCCEEEEeCcccHHHH----HHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447 156 AIAAY----VKRNDAVFVDENINFAIQ----TGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFII 222 (457)
Q Consensus 156 ai~a~----~~~gd~v~~~~~~h~~~~----~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi 222 (457)
++.++ .++||.|++..+.|.+.. ......|.++..++. .|++++++.+. +++++|+
T Consensus 96 ~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~-----------~~~~lv~ 164 (403)
T TIGR01979 96 VAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLT-----------EKTKLVA 164 (403)
T ss_pred HHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhc-----------cCCeEEE
Confidence 77654 578999999999888754 234466888777754 26778877774 3467888
Q ss_pred EecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecH
Q psy15447 223 VEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSS 301 (457)
Q Consensus 223 ~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~ 301 (457)
+.++++++|.+.|+++|.++|++||+++|+|++|+.|... .++...++|+++.|++|.+|+.| |+++.++
T Consensus 165 ~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~G~g~l~~~~ 235 (403)
T TIGR01979 165 ITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMP---------VDVQALDCDFYVFSGHKMYGPTGIGVLYGKE 235 (403)
T ss_pred EEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccc---------cCccccCCCEEEEecccccCCCCceEEEEch
Confidence 9999999999999999999999999999999999876431 12222356899999999988766 8888888
Q ss_pred HHHHHHHhhCCc------------------cee-cCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhccc
Q psy15447 302 YIIEHHRLSGSG------------------YCF-SASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHK 360 (457)
Q Consensus 302 ~~~~~~~~~~~~------------------~~~-~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~ 360 (457)
++++.+.....+ +.| .++.+....+++.++++.+.+. +...++..++.+++++.|++
T Consensus 236 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~-- 313 (403)
T TIGR01979 236 ELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGE-- 313 (403)
T ss_pred HHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc--
Confidence 877665321100 112 1234555566667778777553 45678888899999999987
Q ss_pred ccCCeEEeccC----CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc---ccCCCCCeEEEEecCCCC
Q psy15447 361 VTQRFLVQGHR----DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ---EAKKQKPSIRITCNISHT 433 (457)
Q Consensus 361 ~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~---~~~~~~~~lRi~~~~~~t 433 (457)
++++++..+. .++++.+.+... ...++.+.|.++||.++.+.++.. ......+++|++++..+|
T Consensus 314 -~~g~~~~~~~~~~~~~~~v~~~~~~~--------~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t 384 (403)
T TIGR01979 314 -IPGLRIYGPRDAEDRGGIISFNVEGV--------HPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNT 384 (403)
T ss_pred -CCCEEEeCCCCccccCceEEEEeCCc--------CHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCC
Confidence 5688876443 256777776542 234688889999999986543221 001224689999999999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy15447 434 EQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 434 ~edi~~~~~~l~~~~~~~ 451 (457)
++|+++++++|+++++.+
T Consensus 385 ~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 385 EEDIDALVEALKKVRKFF 402 (403)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999988765
No 148
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.96 E-value=5.7e-26 Score=219.00 Aligned_cols=319 Identities=14% Similarity=0.179 Sum_probs=242.3
Q ss_pred eeEEeecC-CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC-CC-cEEEecccH-HHHHHH
Q psy15447 81 PCINFATH-NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG-LE-ETALYSFGF-STSASA 156 (457)
Q Consensus 81 ~~id~~s~-~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-~~-~~i~~~sG~-~a~~~a 156 (457)
..+|+++| |+++. .|.+.+++.+.+..+...+ .+...++++.+++++| .+ ..++.+.|+ +.+...
T Consensus 23 ~~i~LssNenP~gp--~~~~~~~~~~~~~~~~rYP---------d~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l 91 (356)
T COG0079 23 GIIKLSSNENPYGP--PPKVIEAIRAALDKLNRYP---------DPDYRELRAALAEYYGVVDPENVLVGNGSDELIELL 91 (356)
T ss_pred cceeecCCCCCCCC--CHHHHHHHHHHHHhhccCC---------CCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHH
Confidence 68999998 55554 4889999988877543221 2246889999999999 55 345555555 788888
Q ss_pred HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCC
Q psy15447 157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD 232 (457)
Q Consensus 157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~ 232 (457)
+.+++.+||.|++..++|..+...++..|.+++.++.. |++.+.+.+.+ +.++|++++++||||.
T Consensus 92 ~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~~~~d~~~~~~~~~~-----------~~~lv~i~nPNNPTG~ 160 (356)
T COG0079 92 VRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKEFRLDLDAILAAIRD-----------KTKLVFLCNPNNPTGT 160 (356)
T ss_pred HHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccccccCHHHHHHhhhc-----------CCCEEEEeCCCCCCCC
Confidence 99999999999999999999999999999999988873 55555555543 4579999999999999
Q ss_pred CCChHHHHHHHHHc--CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHH
Q psy15447 233 ICPLKDILSLRSKY--QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHH 307 (457)
Q Consensus 233 i~~l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~ 307 (457)
..+.++|.++++.. +.++|+||||.-.. +. ....... .+.++ +++.||||++|.+| ||+++++++++.+
T Consensus 161 ~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~-~~---~~~~l~~-~~~nl-ivlRTfSKa~gLAGlRlGy~ia~~~~i~~l 234 (356)
T COG0079 161 LLPREELRALLEALPEGGLVVIDEAYIEFS-PE---SSLELLK-YPPNL-IVLRTFSKAFGLAGLRVGYAIANPELIAAL 234 (356)
T ss_pred CCCHHHHHHHHHhCCCCcEEEEeCchhhcC-Cc---hhhhhcc-CCCCE-EEEEecHHhhhcchhceeeccCCHHHHHHH
Confidence 99988888887754 88999999986421 11 1122222 23333 88999999998766 9999999999999
Q ss_pred HhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchH
Q psy15447 308 RLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEV 387 (457)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 387 (457)
+....+| +.+.++.+++.++++..+...+.++++.+.++++.+.|+. .++.-+.++..+++.+.+++ .
T Consensus 235 ~~vr~p~----~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~----~~~~~v~pS~aNFvlv~~~~-~--- 302 (356)
T COG0079 235 NKVRPPF----NVSSPALAAAIAALRDADYLEESVERIREERERLYAALKA----LGLFGVFPSQANFVLVRVPD-A--- 302 (356)
T ss_pred HHhcCCC----CCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHh----CCCCeecCCCCcEEEEECCC-c---
Confidence 8877666 5677788888888765544456778888999999999998 34331235668888888765 2
Q ss_pred HHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 388 ASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 388 ~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
.+..+.+.|+++||+++..... +...+++||++. |++|.++++++|+++++.
T Consensus 303 ----~~~~l~~~L~~~giivR~~~~~----~~~~~~lRitvg---t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 303 ----EAAALAEALLKKGILVRDCSSV----GLLPGYLRITVG---TPEENDRLLAALREVLKG 354 (356)
T ss_pred ----cHHHHHHHHHHCCEEEEeCCCC----CCCCCeEEEEeC---CHHHHHHHHHHHHHHHhc
Confidence 2346899999999999976421 234679999997 799999999999988754
No 149
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.96 E-value=6.9e-26 Score=224.51 Aligned_cols=340 Identities=14% Similarity=0.121 Sum_probs=236.3
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEE-ecccHHHHHH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETAL-YSFGFSTSAS 155 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~-~~sG~~a~~~ 155 (457)
.++++..+.+ .+..++.+.+|+.+.+..... ..+....|..+....+++.+++++|. +..++ ++++++++..
T Consensus 28 ~~~~l~~g~~-~~~~~~~~~~a~~~~~~~~~~--~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~ 104 (389)
T PRK05957 28 GTISLGQGVV-SYPPPPEAIEALNNFLANPEN--HKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMN 104 (389)
T ss_pred CeEEccCCCC-CCCCCHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHH
Confidence 4577776543 344567888998887764322 22333467788899999999998884 33444 4555588888
Q ss_pred HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447 156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS 230 (457)
Q Consensus 156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~ 230 (457)
++.+++++||.|++..++|......+...|.++..++.+ |++++++.+++ ++++|++.+++||+
T Consensus 105 ~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----------~~klv~~~~p~NPt 173 (389)
T PRK05957 105 AILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAITP-----------KTRAIVTISPNNPT 173 (389)
T ss_pred HHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcCc-----------CceEEEEeCCCCCC
Confidence 888889999999999998877777777888888776543 67888777642 45677788899999
Q ss_pred CCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCC-ccccccCCCCCCccEEEecCcccccCcc---cEEEecHHH
Q psy15447 231 ADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGH-GVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYI 303 (457)
Q Consensus 231 G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~-~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~ 303 (457)
|.+.| +++|.++|++||+++|+||+|+...++.... ......+. ....|++.||||.+|.+| ||+++++++
T Consensus 174 G~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~ 251 (389)
T PRK05957 174 GVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGS--GNHTISLYSLSKAYGFASWRIGYMVIPIHL 251 (389)
T ss_pred CcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCc--cCcEEEEecchhhccCccceeEEEecCHHH
Confidence 99998 8889999999999999999997655442111 11111111 223588999999998776 999999999
Q ss_pred HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh-hCcHHHHHHHHHHHHHHHHhhcccccCCe-EEeccCCCCeEEEEec
Q psy15447 304 IEHHRLSGSGYCFSASLPPFLAVAANKALHLLK-ANPSLLTKLREKCNTMHSLLSQHKVTQRF-LVQGHRDTPLKYLYLQ 381 (457)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~i~~~ 381 (457)
++.+......+ ..+.+.+...++..+++.-. ...+.+++++++.+.+.+.|++ ..++ .+..+..+.++|+.+.
T Consensus 252 ~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~---~~~~~~~~~~~gg~~~~~~~~ 326 (389)
T PRK05957 252 LEAIKKIQDTI--LICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQ---LQDRCTLHPANGAFYCFLKVN 326 (389)
T ss_pred HHHHHHHHhhc--ccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh---cCCCccccCCCeeEEEEEeCC
Confidence 98887543222 22234445555555553200 0123556788888889898887 3443 4433444667788776
Q ss_pred CCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 382 KSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
... ...+++++|. ++||.+.++..+. ...++++|++++. .+++++++.++.|.+.++.+-
T Consensus 327 ~~~-------~~~~~~~~l~~~~gv~v~pg~~f~---~~~~~~iRis~~~-~~~~~l~~~~~~l~~~~~~~~ 387 (389)
T PRK05957 327 TDL-------NDFELVKQLIREYRVAVIPGTTFG---MKNGCYLRIAYGA-LQKATAKEGIERLVQGLKTIV 387 (389)
T ss_pred CCC-------ChHHHHHHHHHHCCEEEccchhhC---CCCCCEEEEEEec-CCHHHHHHHHHHHHHHHHhhh
Confidence 543 4567889987 5799999876432 1224689999965 478999999999988877654
No 150
>PRK09148 aminotransferase; Validated
Probab=99.96 E-value=5.1e-26 Score=226.44 Aligned_cols=349 Identities=13% Similarity=0.081 Sum_probs=234.0
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----C-cEEEecccHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----E-ETALYSFGFST 152 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~-~~i~~~sG~~a 152 (457)
.|+.++||..+++ .+...+.+.+++.+.+..-. ...+....|..++...+++.+.+..|. + .++++++++++
T Consensus 28 ~~~~~i~l~~~~p-~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a 104 (405)
T PRK09148 28 AGADIIDLGMGNP-DLPTPQHIVDKLCETAQDPR--THRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEG 104 (405)
T ss_pred cCCCeEEcCCCCC-CCCCCHHHHHHHHHHHcCcc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHH
Confidence 3677899987654 34445778888777664311 111222334555555555555444353 3 45555666789
Q ss_pred HHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447 153 SASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM 228 (457)
Q Consensus 153 ~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~ 228 (457)
+..++.+++++||.|++..++|..+...+...|.++..++.. +++++++.++... ++++++++.+++|
T Consensus 105 l~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~--------~~~~~v~l~~P~N 176 (405)
T PRK09148 105 FANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSI--------PKPIALIVNYPSN 176 (405)
T ss_pred HHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhcc--------ccceEEEEeCCCC
Confidence 999999999999999999999988887788889888877642 3456666665432 3557888888899
Q ss_pred CCCCCCCh---HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHH
Q psy15447 229 NSADICPL---KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSY 302 (457)
Q Consensus 229 ~~G~i~~l---~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~ 302 (457)
|+|.+.+. ++|.++|++||+++|+||+|+...++...........-. .+..|+++||||.+|.+| ||++++++
T Consensus 177 PtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~-~~~~i~~~SfSK~~~~pGlR~G~~v~~~~ 255 (405)
T PRK09148 177 PTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGA-KDVTVEFTSMSKTFSMAGWRMGFAVGNER 255 (405)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCc-cCcEEEEeccccccCCcchheeeeeCCHH
Confidence 99999994 688899999999999999998654432111111111111 233577899999998766 99999999
Q ss_pred HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEec
Q psy15447 303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ 381 (457)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~ 381 (457)
+++.+........++ .+.+...++.+.++.-+. .+.+++.++++.+++.+.|++ .++.+..+..+.++|+.++
T Consensus 256 ~i~~l~~~~~~~~~~--~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~p~~g~f~~~~l~ 329 (405)
T PRK09148 256 LIAALTRVKSYLDYG--AFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGR----AGWDIPPPAASMFAWAPIP 329 (405)
T ss_pred HHHHHHHHHHHhccC--CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----cCCccCCCCeeEEEEEECC
Confidence 998886543221222 244555555555532111 134567788889999999988 4666544556778888876
Q ss_pred CCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 382 KSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
..... ....++++.|+ ++||.+.++..+. ....+++||++. .++++++++++.|.+++.....
T Consensus 330 ~~~~~----~~~~~~~~~ll~~~gV~v~pg~~f~---~~~~~~~Ri~~~--~~~~~l~~al~~l~~~l~~~~~ 393 (405)
T PRK09148 330 EAFRH----LGSLEFSKLLVEKADVAVAPGVGFG---EHGDGYVRIALV--ENEQRIRQAARNIKRFLSSADE 393 (405)
T ss_pred CccCC----CCHHHHHHHHHHhCCEEEeCchhhC---CCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHHHH
Confidence 43100 02346777776 6799999876432 122578999986 5789999999999888876543
No 151
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.96 E-value=2.9e-26 Score=224.12 Aligned_cols=316 Identities=14% Similarity=0.153 Sum_probs=229.3
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAI 157 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai 157 (457)
.++|||+++++ .+..+|++++++.+++.... .++ ... ..++++.++++++.+ ++++++++++++..++
T Consensus 19 ~~~i~l~~~~~-~~~~~~~~~~a~~~~~~~~~-~y~-------~~~-~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~ 88 (346)
T TIGR01141 19 KEVIKLNSNEN-PFGPPPKAKEALRAEADKLH-RYP-------DPD-PAELKQALADYYGVDPEQILLGNGSDEIIELLI 88 (346)
T ss_pred CceEEccCCCC-CCCCCHHHHHHHHHhHHHhh-cCC-------CCC-HHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHH
Confidence 47999998776 56667899999998875421 111 111 268999999999853 4555566668888888
Q ss_pred HhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCC
Q psy15447 158 AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD 232 (457)
Q Consensus 158 ~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~ 232 (457)
.+++++||.|++..++|..........|.++..++. .|++++++.+. +++++|++++++||+|.
T Consensus 89 ~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~-----------~~~~~v~l~~p~NptG~ 157 (346)
T TIGR01141 89 RAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAID-----------DKPKLVFLCSPNNPTGN 157 (346)
T ss_pred HHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcC-----------CCCCEEEEeCCCCCCCC
Confidence 888999999999999988777677788888887764 36777777542 34577888899999999
Q ss_pred CCChHHHHHHHHHc--CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHH
Q psy15447 233 ICPLKDILSLRSKY--QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHH 307 (457)
Q Consensus 233 i~~l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~ 307 (457)
+.|++++.++|+.+ |+++|+||+|+..... +. ........+ .+++++|+||++|.+| ||+++++++++.+
T Consensus 158 ~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~--~~-~~~~~~~~~--~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~ 232 (346)
T TIGR01141 158 LLSRSDIEAVLERTPEDALVVVDEAYGEFSGE--PS-TLPLLAEYP--NLIVLRTLSKAFGLAGLRIGYAIANAEIIDAL 232 (346)
T ss_pred CCCHHHHHHHHHhCCCCcEEEEECchhhhcCC--cc-HHHHHhhCC--CEEEEehhhHhhhchhhhceeeecCHHHHHHH
Confidence 99999999999887 9999999998732211 11 111111111 2588999999997666 9999999999888
Q ss_pred HhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchH
Q psy15447 308 RLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEV 387 (457)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 387 (457)
+..... + +.+++.+.++.+.++......+.+++++++.+++++.|++ .+|+.+. +..+.++++.++.
T Consensus 233 ~~~~~~--~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~---~~g~~~~-~~~g~~~~~~~~~----- 299 (346)
T TIGR01141 233 NKVRAP--F--NLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKK---LPGLEVY-PSDANFVLIRFPR----- 299 (346)
T ss_pred HhccCC--C--CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCEEC-CCcCCEEEEecCC-----
Confidence 754322 2 3466666666666544322234677888899999999987 4577654 4567888887764
Q ss_pred HHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447 388 ASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLC 445 (457)
Q Consensus 388 ~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 445 (457)
...++.+.|.++||.+.++..+. ...+++|++++ +++|+++++++|+
T Consensus 300 ----~~~~~~~~L~~~gI~v~~g~~f~----~~~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 300 ----DADALFEALLEKGIIVRDLNSYP----GLPNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred ----CHHHHHHHHHHCCeEEEeCCCcC----CCCCeEEEecC---CHHHHHHHHHHhC
Confidence 13478899999999998876421 11578999975 8999999998874
No 152
>PRK08912 hypothetical protein; Provisional
Probab=99.96 E-value=7.3e-26 Score=224.44 Aligned_cols=337 Identities=17% Similarity=0.160 Sum_probs=232.6
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----C-cEEEecccHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----E-ETALYSFGFSTSA 154 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~-~~i~~~sG~~a~~ 154 (457)
...+||..+.+ ....++.+.+++.+.+... . ..+....|..++.+.+++.+.+..|. + ++++++++++++.
T Consensus 26 ~~~i~l~~g~p-~~~~p~~~~~~~~~~~~~~-~--~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~ 101 (387)
T PRK08912 26 HGAINLGQGFP-DDPGPEDVRRAAADALLDG-S--NQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALA 101 (387)
T ss_pred CCeEEccCCCC-CCCCCHHHHHHHHHHHhcC-C--CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHH
Confidence 35788887654 3334577888877776541 1 12223345556666666666554452 3 5666777789999
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM 228 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~ 228 (457)
.++.+++++||.|+++.++|..+...+...|.++..++.+ |++++++.+.. +++++++.+++|
T Consensus 102 ~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~-----------~~~~v~l~~p~N 170 (387)
T PRK08912 102 AALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSP-----------RTKAVLLNNPLN 170 (387)
T ss_pred HHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCc-----------cceEEEEeCCCC
Confidence 9999999999999999999999988889999888766542 56777776632 346777778999
Q ss_pred CCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCC-CCccccccCCCCCCccEEEecCcccccCcc---cEEEecH
Q psy15447 229 NSADICP---LKDILSLRSKYQARIFVDESVSFGTLGST-GHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSS 301 (457)
Q Consensus 229 ~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~-g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~ 301 (457)
|+|.+.+ +++|.++|++||+++|+||+|+...++.. ...+....+. .+.+++++||||.+|.+| ||+++++
T Consensus 171 PtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~GlRiG~~~~~~ 248 (387)
T PRK08912 171 PAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGM--RERTVKIGSAGKIFSLTGWKVGFVCAAP 248 (387)
T ss_pred CcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCc--cCceEEEeechhhccCcCceeEEEecCH
Confidence 9999988 66789999999999999999976555321 1122222222 134699999999998766 9999999
Q ss_pred HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447 302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL 380 (457)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~ 380 (457)
++++.+........++. ++...+++.+.+....+ ..+.+++++++.+++.+.|++ .|+.+..+..+.++|+.+
T Consensus 249 ~~~~~l~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~g~~~l~~~l 322 (387)
T PRK08912 249 PLLRVLAKAHQFLTFTT--PPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRR----IGFPVLPSQGTYFLTVDL 322 (387)
T ss_pred HHHHHHHHHHhhccccC--ChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCcccCCCcceEEEecc
Confidence 99988865443333333 44444444444421111 134678888999999999988 477665445566778777
Q ss_pred cC---CcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 381 QK---SDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 381 ~~---~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
+. .. ...++++.|+ ++||.+.++..+... ....+++|++++. .++++++.++.|+++++
T Consensus 323 ~~~~~~~-------~~~~~~~~l~~~~gV~v~pg~~f~~~-~~~~~~iRl~~~~--~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 323 APLGLAE-------DDVAFCRRLVEEAGVAAIPVSAFYEE-DPVTSVVRFCFAK--RDATLDEAVERLAAARR 385 (387)
T ss_pred cccCCCC-------CHHHHHHHHHhcCCEEEecchhhCCC-CCCCCEEEEEEeC--CHHHHHHHHHHHHHHHh
Confidence 54 12 3457888876 469999987643210 1235799999985 58999999999988765
No 153
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.96 E-value=7.9e-26 Score=223.80 Aligned_cols=333 Identities=15% Similarity=0.196 Sum_probs=225.4
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHHHHH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTSASA 156 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~~~a 156 (457)
.++||+.+++ .+...+.+.+++.+.+... . ..+....|..++.+.+++.+.+..| .+.+++++++++++..+
T Consensus 30 ~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~-~--~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~ 105 (384)
T PRK06348 30 DIIDLSLGDP-DLITDESIINAAFEDAKKG-H--TRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLA 105 (384)
T ss_pred CcEEcCCCCC-CCCCCHHHHHHHHHHHhcC-C--CCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHH
Confidence 4688887654 3444567776665544331 1 1122233444444455554443323 34566677777899999
Q ss_pred HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447 157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN 229 (457)
Q Consensus 157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~ 229 (457)
+.+++++||.|+++.++|..+...+...|.++..++. .|++++++.++. ++++|++++++||
T Consensus 106 ~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----------~~~~v~l~~p~NP 174 (384)
T PRK06348 106 LQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITS-----------KTKAIILNSPNNP 174 (384)
T ss_pred HHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCc-----------CccEEEEeCCCCC
Confidence 9999999999999999999999888888988777652 367888777642 3456666789999
Q ss_pred CCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHH
Q psy15447 230 SADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYI 303 (457)
Q Consensus 230 ~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~ 303 (457)
+|.+.+ +++|.++|++||+++|+||+|+...++.....+....+. ++ ..|+++||||.+|.+| ||+++++++
T Consensus 175 tG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~-~vi~~~SfSK~~~l~GlRiG~~v~~~~~ 252 (384)
T PRK06348 175 TGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGM-PE-RTITFGSFSKDFAMTGWRIGYVIAPDYI 252 (384)
T ss_pred CCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCC-cC-cEEEEecchhccCCccccceeeecCHHH
Confidence 999988 678888899999999999999865554321111121121 22 3589999999998655 999999998
Q ss_pred HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecC
Q psy15447 304 IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQK 382 (457)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~ 382 (457)
++.+........++ .+++...++..++...++ .+++++.++++.+++.+.|++ .+++.+..+.++.++|+.++.
T Consensus 253 ~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~---~~~~~~~~p~gg~~~~~~~~~ 327 (384)
T PRK06348 253 IETAKIINEGICFS--APTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIES---IPNLSLHPPKGSIYAFINIKK 327 (384)
T ss_pred HHHHHHHHHhccCC--CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc---CCCceeccCCeeEEEEEeccc
Confidence 88876543322333 366666666666543221 124566778888889898887 456666544456677887763
Q ss_pred -CcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 383 -SDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 383 -~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
.. ...++++.|++ +||.+.++..+. ....+++|++++ .++++++++++.|+++
T Consensus 328 ~~~-------~~~~l~~~l~~~~gv~v~pg~~f~---~~~~~~iRi~~~--~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 328 TGL-------SSVEFCEKLLKEAHVLVIPGKAFG---ESGEGYIRLACT--VGIEVLEEAFNRIEKM 382 (384)
T ss_pred CCC-------CHHHHHHHHHHhCCEEEcCchhhc---cCCCCeEEEEec--CCHHHHHHHHHHHHhh
Confidence 22 34578888864 699999876532 123579999986 4889999999888653
No 154
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.96 E-value=7.5e-26 Score=226.95 Aligned_cols=338 Identities=16% Similarity=0.162 Sum_probs=235.0
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCC-CCCc-ccChHHHHHHHHHHHhhcCCC---cEEEecccHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCG-PRGF-YGTNVVHLDLENDIASFMGLE---ETALYSFGFSTSA 154 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~-~~~~-~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~ 154 (457)
.-|+|.++. +. ..+.+.+++.+.+.++...+.. .... .-..+...++++.+++++|.+ .+++++++++++.
T Consensus 33 ~iyLd~a~~---~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~ 108 (424)
T PLN02855 33 LVYLDNAAT---SQ-KPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAIN 108 (424)
T ss_pred eEEeeCccc---cC-CCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHH
Confidence 346666543 22 3467999998888765432211 1110 012345678999999999963 4566667778888
Q ss_pred HHHHh----hcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447 155 SAIAA----YVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFI 221 (457)
Q Consensus 155 ~ai~a----~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~v 221 (457)
.++.+ ..++||.|++....|.+.... .+..|.++..++.+ |++++++.+.+ ++++|
T Consensus 109 ~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~~-----------~t~lv 177 (424)
T PLN02855 109 LVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLSE-----------KTKLV 177 (424)
T ss_pred HHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhcc-----------CceEE
Confidence 77765 357899999999888765433 34567787776542 67788877742 45788
Q ss_pred EEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEec
Q psy15447 222 IVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGS 300 (457)
Q Consensus 222 i~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~ 300 (457)
++.+++|++|.+.|+++|.++|+++|+++++|++|+.|... .++...++|+++.|++|.+|+.| |+++.+
T Consensus 178 ~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~ 248 (424)
T PLN02855 178 ATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMP---------VDVQTLGADFLVASSHKMCGPTGIGFLWGK 248 (424)
T ss_pred EEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcC---------CCchhcCCCEEEeecccccCCCccEEEEEc
Confidence 99999999999999999999999999999999999765421 12222346899999999777665 899888
Q ss_pred HHHHHHHHhhCCc------------------cee-cCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcc
Q psy15447 301 SYIIEHHRLSGSG------------------YCF-SASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQH 359 (457)
Q Consensus 301 ~~~~~~~~~~~~~------------------~~~-~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~ 359 (457)
+++++.+.....+ ..| .++.+....++..++++.+.+. +...++.+++.+++++.|++
T Consensus 249 ~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~- 327 (424)
T PLN02855 249 SDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSS- 327 (424)
T ss_pred hhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-
Confidence 8877665322100 001 1234445555556778776553 45677888899999999987
Q ss_pred cccCCeEEeccC------CCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCcc---ccCCCCCeEEEEec
Q psy15447 360 KVTQRFLVQGHR------DTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQ---EAKKQKPSIRITCN 429 (457)
Q Consensus 360 ~~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~---~~~~~~~~lRi~~~ 429 (457)
++++++.++. .++++.+.+... ...++.+.|.++ ||.++.+.++.. .....++.+|++++
T Consensus 328 --~~g~~i~~~~~~~~~~r~~~v~~~~~~~--------~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~ 397 (424)
T PLN02855 328 --VPGVRIYGPKPSEGVGRAALCAFNVEGI--------HPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLY 397 (424)
T ss_pred --CCCEEEeCCCcccccCcccEEEEEECCc--------CHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEec
Confidence 5688876532 245777776542 345788899887 999987654321 00112468999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 430 ISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 430 ~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
..+|++|+++++++|+++++.++
T Consensus 398 ~ynt~~di~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 398 FYNTKEEVDAFIHALKDTIAFFS 420 (424)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999987653
No 155
>PRK02948 cysteine desulfurase; Provisional
Probab=99.96 E-value=3.5e-26 Score=226.40 Aligned_cols=325 Identities=14% Similarity=0.080 Sum_probs=224.3
Q ss_pred ChhhHHHHHHHHHhcCCCCCCCC-CcccChHHHHHHHHHHHhhcCCC-c-EEEecccHHHHHHHHHhhc----CCCCEEE
Q psy15447 96 NPDIEKCAIDCIDKNGVGSCGPR-GFYGTNVVHLDLENDIASFMGLE-E-TALYSFGFSTSASAIAAYV----KRNDAVF 168 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~~~~~-~~~g~~~~~~~l~~~la~~~g~~-~-~i~~~sG~~a~~~ai~a~~----~~gd~v~ 168 (457)
++.+.+++.+.++.+...+.+.. ......+..+++++.+++++|.+ . +++++++++++..++.++. ++|+.|+
T Consensus 13 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv 92 (381)
T PRK02948 13 SKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHII 92 (381)
T ss_pred CHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEE
Confidence 57899999988876543322111 11122467788999999999843 3 4455566789888887764 5789999
Q ss_pred EeCcccHHHHHH---HHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHH
Q psy15447 169 VDENINFAIQTG---LIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDIL 240 (457)
Q Consensus 169 ~~~~~h~~~~~~---~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~ 240 (457)
++...|++.... ++..|.++..++. .|++++++.+++ ++++|++++++|++|.+.|+++|.
T Consensus 93 ~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-----------~~~lv~~~~~~n~tG~~~~~~~I~ 161 (381)
T PRK02948 93 TTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAITP-----------DTVLASIQHANSEIGTIQPIAEIG 161 (381)
T ss_pred ECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcCC-----------CCEEEEEECCcCCcEeehhHHHHH
Confidence 999888876554 4556777776653 378888877742 457999999999999999999999
Q ss_pred HHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHH-HHHHHhh---CCcce
Q psy15447 241 SLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYI-IEHHRLS---GSGYC 315 (457)
Q Consensus 241 ~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~-~~~~~~~---~~~~~ 315 (457)
++|+++|+++++|+++++|..+. ++...++|+++.|++|.+|+.| |+++.++++ ....... ..++.
T Consensus 162 ~l~~~~~~~vivD~~~~~g~~~~---------~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~ 232 (381)
T PRK02948 162 ALLKKYNVLFHSDCVQTFGKLPI---------DVFEMGIDSLSVSAHKIYGPKGVGAVYINPQVRWKPVFPGTTHEKGFR 232 (381)
T ss_pred HHHHHcCCEEEEEChhhcccccc---------CcccCCCCEEEecHHhcCCCCcEEEEEEcCCCCCCCcccCCCCCCCcC
Confidence 99999999999999998765421 1222356899999999998765 777776653 1111100 11112
Q ss_pred ecCCCcHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-C----CCeEEEEecCCcchHHH
Q psy15447 316 FSASLPPFLAVAANKALHLL-KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR-D----TPLKYLYLQKSDDEVAS 389 (457)
Q Consensus 316 ~~~~~~~~~~aaa~a~l~~~-~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~-~----~~~~~i~~~~~~~~~~~ 389 (457)
.++.+..+.+++.++++.+ +..++.+++++++.+++++.|++ .++++.... . ..++.+.+..-
T Consensus 233 -~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~v~~~~~~~~~~~~i~~~~~~~~------ 301 (381)
T PRK02948 233 -PGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQT----LPLPIEVEGHSTSCLPHIIGVTIKGI------ 301 (381)
T ss_pred -CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCEEEeCCCccCcCCEEEEEeCCC------
Confidence 2345677777777777765 33356778999999999999988 344332111 1 22333443321
Q ss_pred HHHHHHHHHHHHHcCeeEeccccCcccc--------------CCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 390 KKLLQTICDMCIQAGFAITCPSHLDQEA--------------KKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 390 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--------------~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
...++...|.++||.++.+..|.... +...+++|++++..+|++|+++++++|+++++.+..
T Consensus 302 --~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 377 (381)
T PRK02948 302 --EGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFYR 377 (381)
T ss_pred --CHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 23457778888999999765432100 112478999999999999999999999998877654
No 156
>PRK07777 aminotransferase; Validated
Probab=99.96 E-value=8.7e-26 Score=223.89 Aligned_cols=337 Identities=16% Similarity=0.141 Sum_probs=226.5
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC-----cEEEecccHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE-----ETALYSFGFSTSA 154 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-----~~i~~~sG~~a~~ 154 (457)
.+++||..+.+ .....+.+.+++.+.+.. .. ..+....|..++.+.+++.+.+.+|.+ +++++++|++|+.
T Consensus 24 ~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~-~~--~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~ 99 (387)
T PRK07777 24 TGAVNLGQGFP-DEDGPPEMLEAAQEAIAG-GV--NQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIA 99 (387)
T ss_pred CCeEEccCCCC-CCCCCHHHHHHHHHHHhc-CC--CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHH
Confidence 35788887654 333456677777776654 11 112222345555555555555555642 4677777889999
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV 226 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v 226 (457)
.++.+++++||.|++..++|..+...+...|.++..++. .|++++++.+.+ ++++|+++++
T Consensus 100 ~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~-----------~~~~v~l~~p 168 (387)
T PRK07777 100 AAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTP-----------RTRALIVNSP 168 (387)
T ss_pred HHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCc-----------ccEEEEEcCC
Confidence 999999999999999999999888888888888776653 356777776632 3467778889
Q ss_pred CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccC-CCCccccccCCCCCCccEEEecCcccccCcc---cEEEe
Q psy15447 227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGS-TGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVG 299 (457)
Q Consensus 227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~-~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~ 299 (457)
+||+|.+.+ +++|.++|++||+++|+||+|+...+.. ....+....+. .+.+|+++||||.+|.+| ||+++
T Consensus 169 ~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~GlRiG~~~~ 246 (387)
T PRK07777 169 HNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGM--RERTVTISSAAKTFNVTGWKIGWACG 246 (387)
T ss_pred CCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCC--cCcEEEEeechhhccCcCceeEEEec
Confidence 999999987 7799999999999999999997655422 11122221111 234799999999998666 99999
Q ss_pred cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh-hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE
Q psy15447 300 SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL 378 (457)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i 378 (457)
++++++.+........++.+ ++. ..++...+...+ ..+.+++.++++.+.+.+.|++ .++.+..+..+.++|+
T Consensus 247 ~~~l~~~~~~~~~~~~~~~~-~~~-q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~g~~~~~~ 320 (387)
T PRK07777 247 PAPLIAAVRAAKQYLTYVGG-APF-QPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAE----AGFEVHDSAGTYFLCA 320 (387)
T ss_pred CHHHHHHHHHHHhhcccCCC-CHH-HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHh----CCCCccCCCcceEEEe
Confidence 99988877654322223222 332 233333332111 1134667888999999999988 4666554445666776
Q ss_pred EecC--CcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 379 YLQK--SDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 379 ~~~~--~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
.++. .. ...+++++|+ ++||.+.++..+....+...+++||++.. +++++++.++.|+++.
T Consensus 321 ~~~~~~~~-------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~--~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 321 DPRPLGYD-------DGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK--RDDTLDEAIRRLRALR 384 (387)
T ss_pred cccccCCC-------CHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 6542 11 3457899997 56999998764321112235689999964 7999999999998764
No 157
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.96 E-value=1.9e-25 Score=221.60 Aligned_cols=341 Identities=12% Similarity=0.097 Sum_probs=232.4
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-----CcEEEecccHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-----EETALYSFGFSTSA 154 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-----~~~i~~~sG~~a~~ 154 (457)
..+|||..+.+ .+...+.+.+++.+.+... .. .+....|..++.+.+++.+....|. +++++++++++++.
T Consensus 30 ~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~-~~--~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~ 105 (391)
T PRK07309 30 PGILKLTLGEP-DFTTPDHVKEAAKRAIDAN-QS--HYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALS 105 (391)
T ss_pred CCeEEcCCCCC-CCCCCHHHHHHHHHHHhcC-CC--CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHH
Confidence 45889987654 3444677888888777542 11 1212234444444444444433342 35666777789999
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM 228 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~ 228 (457)
.++.+++++||.|++..+.|......++..|.++..++. .|++.+++.+++.. ++++++++.+++|
T Consensus 106 ~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~--------~~~~~i~l~~P~N 177 (391)
T PRK07309 106 ASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQG--------DKLKAVILNYPAN 177 (391)
T ss_pred HHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccC--------CCeEEEEEECCCC
Confidence 999999999999999999999888888888988877753 26788888876432 3456777788899
Q ss_pred CCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccc-cCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecH
Q psy15447 229 NSADICP---LKDILSLRSKYQARIFVDESVSFGTL-GSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSS 301 (457)
Q Consensus 229 ~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~-g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~ 301 (457)
|+|.+.+ +++|.++|++||+++|+||+|+...+ +.....+.. ..+++ .|+++||||.+|.+| ||+++++
T Consensus 178 PtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~---~~~~~-~i~~~S~SK~~g~~GlRvG~~v~~~ 253 (391)
T PRK07309 178 PTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAE---YLPDQ-TILINGLSKSHAMTGWRIGLIFAPA 253 (391)
T ss_pred CCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHH---hccCC-EEEEecChhhccCccceeEEEEeCH
Confidence 9999887 78899999999999999999986554 221111111 12233 488999999998766 9999999
Q ss_pred HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447 302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL 380 (457)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~ 380 (457)
++++.+.... .+... +.+++...++.+.++.-.. ....+++++++.+++.+.|++ .++.+..+..+.++|+.+
T Consensus 254 ~~~~~~~~~~-~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~p~gg~~~~~~l 327 (391)
T PRK07309 254 EFTAQLIKSH-QYLVT-AATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTD----LGFKIIKPDGAFYIFAKI 327 (391)
T ss_pred HHHHHHHHHH-hhccc-CCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHH----CCCeecCCCeeEEEEEEC
Confidence 9988886542 22222 2355555555555532111 123467778888899999988 467665444566677776
Q ss_pred cCCcchHHHHHHHHHHHHHH-HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 381 QKSDDEVASKKLLQTICDMC-IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+..... ...++++.+ .++||.+.++..+. ....+++|++++. +.+++++++++|++++++..
T Consensus 328 ~~~~~~-----~~~~~~~~l~~~~gv~v~pg~~f~---~~~~~~iRi~~~~--~~~~l~~~i~~l~~~~~~~~ 390 (391)
T PRK07309 328 PAGYNQ-----DSFKFLQDFARKKAVAFIPGAAFG---PYGEGYVRLSYAA--SMETIKEAMKRLKEYMEEHA 390 (391)
T ss_pred CCCCCC-----CHHHHHHHHHHhCCEEEeCchhhC---CCCCCEEEEEecC--CHHHHHHHHHHHHHHHHhhc
Confidence 542100 234677665 46799998876432 2235799999874 68999999999999887654
No 158
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.96 E-value=5.8e-26 Score=224.17 Aligned_cols=316 Identities=13% Similarity=0.120 Sum_probs=227.3
Q ss_pred CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhcC----CCCEEE
Q psy15447 95 ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYVK----RNDAVF 168 (457)
Q Consensus 95 ~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~~----~gd~v~ 168 (457)
.+|.+.+++.+++.... + .+..+.+..+...++++.+++++|.+ ..+++++|++++..++.++.. +++.|+
T Consensus 32 ~~~~~~~a~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl 108 (371)
T PRK13520 32 PHPIARKAHEMFLETNL-G--DPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIV 108 (371)
T ss_pred chHHHHHHHHHHHhcCC-C--CcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEE
Confidence 57999999999887631 1 12223456677789999999999975 357888999999999877654 578999
Q ss_pred EeCcccHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHH
Q psy15447 169 VDENINFAIQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLR 243 (457)
Q Consensus 169 ~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~ 243 (457)
+....|.+....++..|.++..++. .|++++++.+++ ++++|++..+.+++|.+.|+++|.++|
T Consensus 109 ~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----------~~~~vi~~~~~~~tG~~~~l~~I~~l~ 177 (371)
T PRK13520 109 VPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLIDD-----------NTIGIVGIAGTTELGQVDPIPELSKIA 177 (371)
T ss_pred ecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHhh-----------CCEEEEEEcCCcCCcccCCHHHHHHHH
Confidence 9999999988888888888887764 378999988864 234555555667899999999999999
Q ss_pred HHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cc-cEEEecHHHHHHHHhhCCccee----
Q psy15447 244 SKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VG-GFCVGSSYIIEHHRLSGSGYCF---- 316 (457)
Q Consensus 244 ~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~g-G~v~~~~~~~~~~~~~~~~~~~---- 316 (457)
++||+++++|++|+.+.++....+ ..++....++|.+..|.+|+.+. ++ ++++.++++++.+.. ..++.+
T Consensus 178 ~~~g~~livD~a~~~~~~~~~~~~--~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l~~-~~~~~~~~~~ 254 (371)
T PRK13520 178 LENGIFLHVDAAFGGFVIPFLDDP--PNFDFSLPGVDSITIDPHKMGLAPIPAGGILFRDESYLDALAV-DTPYLTSKKQ 254 (371)
T ss_pred HHcCCCEEEEecchhHHHHhhcCC--CCccccCCCCceEEECCccccCccCCceEEEEcCHHHHHhhcc-cCccccCCCC
Confidence 999999999999986653211111 01222224568888889997532 33 455567767776542 122211
Q ss_pred ---cCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHH
Q psy15447 317 ---SASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKK 391 (457)
Q Consensus 317 ---~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 391 (457)
.++.++..++++.++++.+.+. ++++++..++++++.+.|++ .|+++...+..+++.+.+++
T Consensus 255 ~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~v~~~~~~--------- 321 (371)
T PRK13520 255 ATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKE----RGFEPVIEPVLNIVAFDDPN--------- 321 (371)
T ss_pred cceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHh----CCCEEecCCCceEEEEecCC---------
Confidence 2223445567777788766443 34778889999999999988 47763334456676665542
Q ss_pred HHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 392 LLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 392 ~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
..++.++|.++||.++.... .+++|++++..+|++|+++++++|+++++
T Consensus 322 -~~~v~~~L~~~gi~v~~~~~--------~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 322 -PDEVREKLRERGWRVSVTRC--------PEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred -HHHHHHHHHHCCceeccCCC--------CCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 34788999999999876432 36899999888999999999999998764
No 159
>PRK10534 L-threonine aldolase; Provisional
Probab=99.96 E-value=1.1e-26 Score=225.84 Aligned_cols=320 Identities=13% Similarity=0.167 Sum_probs=218.1
Q ss_pred eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhc
Q psy15447 82 CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYV 161 (457)
Q Consensus 82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~ 161 (457)
+|||+||...+ .+|.+.+++.+..... ..|+..+...+|+++|++++|.+.++++++|++++..++.+++
T Consensus 1 ~~~~~~~~~~~--p~~~~~~a~~~~~~~~--------~~Y~~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~~ 70 (333)
T PRK10534 1 MIDLRSDTVTR--PSRAMLEAMMAAPVGD--------DVYGDDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSHC 70 (333)
T ss_pred CcccccccCCC--CCHHHHHHHHhccCCC--------cccCCCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHhc
Confidence 47999986555 4789999887644321 1244567889999999999999999999999999998888889
Q ss_pred CCCCEEEEeCcccHHHHH--HHHhcC-CeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC
Q psy15447 162 KRNDAVFVDENINFAIQT--GLIASR-CKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI 233 (457)
Q Consensus 162 ~~gd~v~~~~~~h~~~~~--~~~~~g-~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i 233 (457)
.+||.|+++.++|..... +....+ .+...++. .|++++++.+.+... +..++++|+++++. +|.+
T Consensus 71 ~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~-----~~~~~~lv~l~np~--~G~v 143 (333)
T PRK10534 71 ERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDI-----HFARTRLLSLENTH--NGKV 143 (333)
T ss_pred CCCCeeEEechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCc-----CcccceEEEEecCC--CCee
Confidence 999999988887754332 123333 45555532 268888777743110 00135677777544 5999
Q ss_pred CChH---HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc-ccEEEecHHHHHHHHh
Q psy15447 234 CPLK---DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV-GGFCVGSSYIIEHHRL 309 (457)
Q Consensus 234 ~~l~---~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~-gG~v~~~~~~~~~~~~ 309 (457)
.|.+ +|.++|++||++|++||+|.++..+..+.... .+. ...|.++.||||++|.+ |||+++++++++.++.
T Consensus 144 ~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~---~~~-~~~~~~~~s~SK~~~~~~G~~~~~~~~~i~~~~~ 219 (333)
T PRK10534 144 LPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELK---EIT-QYCDSFTICLSKGLGTPVGSLLVGNRDYIKRARR 219 (333)
T ss_pred cCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHH---HHH-hcCCEEEEEeEcCCCCcccceEEcCHHHHHHHHH
Confidence 8855 55678999999999999976542211111111 110 11244456899999864 5578899999988865
Q ss_pred hCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHH
Q psy15447 310 SGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVAS 389 (457)
Q Consensus 310 ~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 389 (457)
....+.+..+.+..+++++.++++.. .+.+++.+++++++.+.|++ .|+++. ++.++++++.++..
T Consensus 220 ~~~~~~~~~~~~~~~~a~~~~~l~~~---~~~~~~~~~~r~~l~~~L~~----~g~~~~-~~~~nfv~~~~~~~------ 285 (333)
T PRK10534 220 WRKMTGGGMRQAGILAAAGLYALKHN---VARLQEDHDNAAWLAEQLRE----AGADVM-RQDTNMLFVRVGEE------ 285 (333)
T ss_pred HHHHhCCchhhHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHh----CCCccC-CCCceEEEEECCch------
Confidence 43222212223445556666666432 23445556677899999998 577765 45688888877632
Q ss_pred HHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 390 KKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 390 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
...++.+.|+++||.+++. ..+|++.+..+|++++++++++|++++.
T Consensus 286 --~~~~~~~~l~~~gi~v~~~-----------~~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 286 --QAAALGEYMRERNVLINAS-----------PIVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred --hHHHHHHHHHHcCeeecCC-----------ceEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 3457788999999999754 2589988877899999999999987653
No 160
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.96 E-value=3.6e-26 Score=227.98 Aligned_cols=339 Identities=15% Similarity=0.138 Sum_probs=227.1
Q ss_pred eeeEEee-cCCccCCCCChhhHHHHHHHH-HhcCCCCCCCCCcccChHHHHH----HHHHHHhhcCCCcE-EEecccHHH
Q psy15447 80 IPCINFA-THNYLSFVENPDIEKCAIDCI-DKNGVGSCGPRGFYGTNVVHLD----LENDIASFMGLEET-ALYSFGFST 152 (457)
Q Consensus 80 ~~~id~~-s~~~l~~~~~p~i~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~----l~~~la~~~g~~~~-i~~~sG~~a 152 (457)
+++|++. +.+++ +|++++++.+.+ .+|+.+..+++.+.| .+...+ .++.+++++|.+.. +++++|++|
T Consensus 19 ~~~~~~~~~~~~~----~~~v~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~a 93 (402)
T cd00378 19 RETLELIASENFT----SPAVMEAMGSDLTNKYAEGYPGKRYYGG-CEYVDEIEDLAIERAKKLFGAEYANVQPHSGSQA 93 (402)
T ss_pred HhCeeeeccCCcC----CHHHHHHhcccccccccCCCCCCcccCC-chHHHHHHHHHHHHHHHHhCCCceeeecCCcHHH
Confidence 4567764 44553 689999998776 577766666665444 333333 34457789998765 555789999
Q ss_pred HHHHHHhhcCCCCEEEEeCcccHHHHHH-----HHhcCCeEEE--ecCC------CHHHHHHHHHhhchhcccCCCCccE
Q psy15447 153 SASAIAAYVKRNDAVFVDENINFAIQTG-----LIASRCKVQY--FKHN------NMQHLEELLRQQDERDTLNSKVTKK 219 (457)
Q Consensus 153 ~~~ai~a~~~~gd~v~~~~~~h~~~~~~-----~~~~g~~~~~--~~~~------d~~~le~~l~~~~~~~~~~~~~~~~ 219 (457)
+..++.+++++||.|+++.+.|.+.... +...|.++.. ++.+ |++++++.+.+ .+++
T Consensus 94 ~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~----------~~~~ 163 (402)
T cd00378 94 NLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALE----------FKPK 163 (402)
T ss_pred HHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHh----------CCCC
Confidence 9999999999999999999888654322 4445654433 3333 78999988864 2334
Q ss_pred EEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEE
Q psy15447 220 FIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCV 298 (457)
Q Consensus 220 ~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~ 298 (457)
++++.++. .|...++++|.++|++||+++|+||+|..|..+. |. ... .+ ..+|++++|++|++ |..||+++
T Consensus 164 ~v~~~~~~--~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~-g~-~~~--~~--~~~dv~~~s~sK~l~G~~gg~i~ 235 (402)
T cd00378 164 LIVAGASA--YPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAG-GV-FPN--PL--PGADVVTTTTHKTLRGPRGGLIL 235 (402)
T ss_pred EEEecCcc--cCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhc-cc-CCC--cc--cCCcEEEeccccCCCCCCceEEE
Confidence 55554443 3567799999999999999999999986665432 11 110 11 13488999999999 66789888
Q ss_pred ecH-HHHHHHHhhCCcceecCCCcHHHHHHHHHHHH-HHh-hCcHHHHHHHHHHHHHHHHhhcccccCCeEEec-cCCCC
Q psy15447 299 GSS-YIIEHHRLSGSGYCFSASLPPFLAVAANKALH-LLK-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG-HRDTP 374 (457)
Q Consensus 299 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~-~~~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~ 374 (457)
+++ ++++.++.....+.+++...+.. +++..++. ... ..++++++++++.+++.+.|++ .|+.+.. +..++
T Consensus 236 ~~~~~~~~~l~~~~~~~~~~~~~~~~~-~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~ 310 (402)
T cd00378 236 TRKGELAKKINSAVFPGLQGGPHLHVI-AAKAVALKEALEPEFKAYAKQVVENAKALAEALKE----RGFKVVSGGTDNH 310 (402)
T ss_pred eccHHHHHHHHHHhCccccCCchHHHH-HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHh----CCCeEeecCCCCe
Confidence 876 88888765443333333222233 33223333 332 2245778899999999999988 4776642 34678
Q ss_pred eEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc-CCCCCeEEEEecC----CCCHHHHHHHHHHHHHHHH
Q psy15447 375 LKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA-KKQKPSIRITCNI----SHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 375 ~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~-~~~~~~lRi~~~~----~~t~edi~~~~~~l~~~~~ 449 (457)
++++.+..... ....+.+.|.++||.+.+..+|.... +...+.+|++++. .++++|++++++.|++++.
T Consensus 311 ~v~v~~~~~~~------~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~ 384 (402)
T cd00378 311 LVLVDLRPKGI------TGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALK 384 (402)
T ss_pred EEEEeCCccCC------CHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence 88888763210 23456677888899998765554311 1134689998876 3579999999999999876
Q ss_pred Hhc
Q psy15447 450 IAV 452 (457)
Q Consensus 450 ~~~ 452 (457)
+-.
T Consensus 385 ~~~ 387 (402)
T cd00378 385 DAE 387 (402)
T ss_pred ccc
Confidence 543
No 161
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.96 E-value=9.9e-26 Score=223.73 Aligned_cols=336 Identities=13% Similarity=0.160 Sum_probs=228.7
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTSAS 155 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~~~ 155 (457)
..++||..+.+ .+..++.+.+++.+.+...... +....|..++.+.+++.+.+.+| .+.+++++++++++..
T Consensus 33 ~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~---Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~ 108 (391)
T PRK08361 33 ENVISLGIGEP-DFDTPKNIKEAAKRALDEGWTH---YTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYL 108 (391)
T ss_pred cCeEEcCCCCC-CCCCCHHHHHHHHHHHhcCCCC---CCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHH
Confidence 45788887654 3434678888888877642111 11122343444444444333334 2456777777899999
Q ss_pred HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447 156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM 228 (457)
Q Consensus 156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~ 228 (457)
++.+++++||.|+++.++|..+...+...|.++..++. .|++++++.+.. +++++++++++|
T Consensus 109 ~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~-----------~~~~v~i~~p~N 177 (391)
T PRK08361 109 AFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITK-----------RTRMIVINYPNN 177 (391)
T ss_pred HHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc-----------ccEEEEEeCCCC
Confidence 99999999999999999999988888888988887764 367788777643 346777778899
Q ss_pred CCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHH
Q psy15447 229 NSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSY 302 (457)
Q Consensus 229 ~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~ 302 (457)
|+|.+.| +++|.++|+++++++|+||+|+...+... . ........+ +.+++++|+||.+|.+| ||++++++
T Consensus 178 PtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~-~~~~~~~~~-~~~i~~~s~SK~~~~~GlRiG~~~~~~~ 254 (391)
T PRK08361 178 PTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGA-K-HYPMIKYAP-DNTILANSFSKTFAMTGWRLGFVIAPEQ 254 (391)
T ss_pred CCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCC-C-CCCHhhcCC-CCEEEEecCchhcCCcHhhhhhhccCHH
Confidence 9999999 78899999999999999999976544221 1 111112222 24689999999998766 99999998
Q ss_pred HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh---hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEE
Q psy15447 303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK---ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLY 379 (457)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~---~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~ 379 (457)
+++.+........ .+.+.+...++.+.++.-. ..+..++.++++.+.+.+.|++ .+++.+..+.++.++|+.
T Consensus 255 ~~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~---~~~~~~~~p~g~~~~~~~ 329 (391)
T PRK08361 255 VIKDMIKLHAYII--GNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKE---MPHIKVFEPKGAFYVFAN 329 (391)
T ss_pred HHHHHHHHHhhhc--cCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCEEEEEEEE
Confidence 8887754322111 2335555555555553211 1124567778888888898887 457776545556677777
Q ss_pred ecC-CcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 380 LQK-SDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 380 ~~~-~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
+.. .. ...++++.|++ +||.+.++..+. ...++++|+++.. +++++++.++.|+++++.
T Consensus 330 l~~~~~-------~~~~l~~~l~~~~gv~v~pg~~f~---~~~~~~iRi~~~~--~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 330 IDETGM-------SSEDFAEWLLEKARVVVIPGTAFG---KAGEGYIRISYAT--SKEKLIEAMERMEKALEE 390 (391)
T ss_pred CCCCCC-------CHHHHHHHHHHhCCEEEcCchhhC---CCCCCEEEEEecC--CHHHHHHHHHHHHHHHhc
Confidence 763 22 34567888865 799999876431 1235799999874 788999999999887754
No 162
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.96 E-value=7.7e-26 Score=223.44 Aligned_cols=318 Identities=17% Similarity=0.165 Sum_probs=226.0
Q ss_pred ChhhHHHHHHHHHhcCCCCCC-C-CCcccChHHHHHHHHHHHhhcCCC---cEEEecccHHHHHHHHHhhcC---CCCEE
Q psy15447 96 NPDIEKCAIDCIDKNGVGSCG-P-RGFYGTNVVHLDLENDIASFMGLE---ETALYSFGFSTSASAIAAYVK---RNDAV 167 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~~~-~-~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~ai~a~~~---~gd~v 167 (457)
.+.+.+++.+.+..+...+.. . .......+...++++.+++++|.+ .+++++++++++..++.++.. +||.|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~v 91 (373)
T cd06453 12 PQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEI 91 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEE
Confidence 477888888888665332211 1 111223466778999999999966 566777888999989888876 89999
Q ss_pred EEeCcccHHHHH----HHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHH
Q psy15447 168 FVDENINFAIQT----GLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKD 238 (457)
Q Consensus 168 ~~~~~~h~~~~~----~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~ 238 (457)
++..+.|++... ..+..|.++..++.+ |++++++.+.+ ++++|++.++++++|.+.|+++
T Consensus 92 l~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-----------~~~~v~~~~~~~~tG~~~~~~~ 160 (373)
T cd06453 92 VTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTE-----------RTKLVAVTHVSNVLGTINPVKE 160 (373)
T ss_pred EECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcC-----------CceEEEEeCcccccCCcCCHHH
Confidence 999999987532 234568888777654 78888887753 4578889999999999999999
Q ss_pred HHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhhCCc----
Q psy15447 239 ILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLSGSG---- 313 (457)
Q Consensus 239 i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~~~~---- 313 (457)
|.++|++||++|++|++++.|.... .+...++|+++.|++|++++.| |++++++++++.++....+
T Consensus 161 i~~~~~~~~~~li~D~a~~~~~~~~---------~~~~~~~d~~~~s~~K~~~~~g~g~~~~~~~~~~~~~~~~~g~~~~ 231 (373)
T cd06453 161 IGEIAHEAGVPVLVDGAQSAGHMPV---------DVQDLGCDFLAFSGHKMLGPTGIGVLYGKEELLEEMPPYGGGGEMI 231 (373)
T ss_pred HHHHHHHcCCEEEEEhhhhcCceee---------eccccCCCEEEeccccccCCCCcEEEEEchHHhhcCCCeecCCCcc
Confidence 9999999999999999988654321 1111245899899999998654 8898998887766432111
Q ss_pred --------------ceec-CCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEecc--CCCC
Q psy15447 314 --------------YCFS-ASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH--RDTP 374 (457)
Q Consensus 314 --------------~~~~-~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~--~~~~ 374 (457)
..|. ++.+.....+..++++.+.+. +++.++.+++.+++.+.|++ .+++++..+ ..++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~---~~~~~~~~~~~~~~~ 308 (373)
T cd06453 232 EEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSE---IPGVRVYGDAEDRAG 308 (373)
T ss_pred ccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhc---CCCeEEeCCccccCC
Confidence 0121 223444444445567766643 45677788889999999988 457777532 2366
Q ss_pred eEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc---ccCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447 375 LKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ---EAKKQKPSIRITCNISHTEQDMNSLIETL 444 (457)
Q Consensus 375 ~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~---~~~~~~~~lRi~~~~~~t~edi~~~~~~l 444 (457)
++.+.++.. ...++.+.|.++||.+.++.++.. ......+.+|++++..+|++|+|+++++|
T Consensus 309 ~~~~~~~~~--------~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 309 VVSFNLEGI--------HPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred eEEEEECCc--------CHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 777776542 345788999999999876654321 00112468999999999999999999874
No 163
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.95 E-value=9.2e-26 Score=225.89 Aligned_cols=339 Identities=15% Similarity=0.133 Sum_probs=227.2
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHH-HhcCCCCCCCCCcccChHHHHHHHH----HHHhhcCCCcE-EEecccHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCI-DKNGVGSCGPRGFYGTNVVHLDLEN----DIASFMGLEET-ALYSFGFSTS 153 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l~~----~la~~~g~~~~-i~~~sG~~a~ 153 (457)
+.++++.+++.. -+|.+++++.+.+ .+|+.++.+++...| .+....+++ .+++++|.+.. ++++||++|+
T Consensus 25 ~~~~~l~~~~n~---~~~~v~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt~al 100 (416)
T PRK00011 25 EEHIELIASENF---VSPAVMEAQGSVLTNKYAEGYPGKRYYGG-CEYVDVVEQLAIDRAKELFGAEYANVQPHSGSQAN 100 (416)
T ss_pred hcCeeeecccCc---CCHHHHHHHhchhhcccccCCCCcccccc-chHHHHHHHHHHHHHHHHhCCCceeeecCCchHHH
Confidence 567887765322 3689999987775 356656655555444 334555555 88999998766 6667899999
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHH---HH--HhcCCeEEEec------CCCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQT---GL--IASRCKVQYFK------HNNMQHLEELLRQQDERDTLNSKVTKKFII 222 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~---~~--~~~g~~~~~~~------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi 222 (457)
..++.+++++||.|+++.+.|.+... .. ...|.++..++ ..|++++++.+++. ++++|+
T Consensus 101 ~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~----------~~k~v~ 170 (416)
T PRK00011 101 AAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEH----------KPKLII 170 (416)
T ss_pred HHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhc----------CCCEEE
Confidence 99999999999999999998865321 11 12234555544 24789999888641 234555
Q ss_pred EecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEec-
Q psy15447 223 VEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGS- 300 (457)
Q Consensus 223 ~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~- 300 (457)
+.+ +..|...|+++|.++|++||+++|+|++|+.|..+. |. .. ..+ ..+|++++|++|++ |+.||+++++
T Consensus 171 ~~~--~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~-g~-~~--~~~--~~~di~~~S~~K~l~g~~gg~i~~~~ 242 (416)
T PRK00011 171 AGA--SAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAA-GV-HP--SPV--PHADVVTTTTHKTLRGPRGGLILTND 242 (416)
T ss_pred ECC--CcCCCccCHHHHHHHHHHcCCEEEEECcchhccccc-Cc-cC--CCC--CCCcEEEecCCcCCCCCCceEEEeCC
Confidence 532 234667899999999999999999999998765542 11 00 111 14589999999999 5678999885
Q ss_pred HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEec-cCCCCeEEE
Q psy15447 301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQG-HRDTPLKYL 378 (457)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~i 378 (457)
+++++.++.....+.+++...+..++...+.++.+++. ++++++++++++++++.|++ .|+.+.. ...++++++
T Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~i 318 (416)
T PRK00011 243 EELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAE----RGFRVVSGGTDNHLVLV 318 (416)
T ss_pred HHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh----CCCeeeecCCCCeEEEE
Confidence 68888876554433333322333333334444444333 56788999999999999998 5776642 234577777
Q ss_pred EecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc-ccCCCCCeEEEEec----CCCCHHHHHHHHHHHHHHHHH
Q psy15447 379 YLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCN----ISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-~~~~~~~~lRi~~~----~~~t~edi~~~~~~l~~~~~~ 450 (457)
.+.+.. ....++.+.|.++||.+.....|.. ..+..++.+|++.. ..+|++|+++++++|++++..
T Consensus 319 ~~~~~~------~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 319 DLRSKG------LTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred eCcccC------CCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 775321 0234688888899999875332211 11223457999653 257899999999999998764
No 164
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.8e-25 Score=221.96 Aligned_cols=334 Identities=15% Similarity=0.151 Sum_probs=219.5
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCc-EEEecccHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEE-TALYSFGFSTS 153 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~-~i~~~sG~~a~ 153 (457)
|++++||..+++.. ..++++.+++.+.+..... ..+....|..++..++++.+.+..| .+. +++++++++++
T Consensus 34 g~~~i~l~~g~p~~-~~p~~~~~~~~~~~~~~~~--~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al 110 (394)
T PRK05942 34 GLDLIDLGMGNPDG-AAPQPVIEAAIAALADPQN--HGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGL 110 (394)
T ss_pred CCCeEEcCCCCCCC-CCCHHHHHHHHHHHhCCCC--ccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHH
Confidence 56789998776533 3345677777776653211 1122223444445555555444334 233 44556667899
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV 226 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v 226 (457)
..++.+++++||.|++..++|......+...|.++..++. .|++++++.+. ++++++++.++
T Consensus 111 ~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-----------~~~k~i~l~~P 179 (394)
T PRK05942 111 THLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVA-----------QQAKILYFNYP 179 (394)
T ss_pred HHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhcc-----------ccceEEEEcCC
Confidence 9999999999999999999999888777888888877653 25677776663 24567777788
Q ss_pred CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCC-CCccccccCCCCCCccEEEecCcccccCcc---cEEEe
Q psy15447 227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGST-GHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVG 299 (457)
Q Consensus 227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~-g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~ 299 (457)
+||||.+.+ +++|.++|++||+++|+||+|+...+... ...+....+. .+..|+++||||.+|.+| ||+++
T Consensus 180 ~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~--~~~~i~~~SfSK~~~~~GlRiG~i~~ 257 (394)
T PRK05942 180 SNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGA--KDIGVEFHTLSKTYNMAGWRVGFVVG 257 (394)
T ss_pred CCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCc--cccEEEEecchhccCChhhheeeeec
Confidence 999999998 77899999999999999999976544211 1111111111 234588899999998766 99999
Q ss_pred cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE
Q psy15447 300 SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL 378 (457)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i 378 (457)
++++++.++.......+ +.+.....++.++++..++ .++.+++++++.+++.+.|++ .++.+..+..+.++|+
T Consensus 258 ~~~l~~~l~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~~~~~~f~~~ 331 (394)
T PRK05942 258 NRHIIQGLRTLKTNLDY--GIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGE----LGWNIPPTKATMYLWV 331 (394)
T ss_pred CHHHHHHHHHHHhhccc--CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCeecCCCeeeEEEE
Confidence 99999888754322222 2344555555556543222 134677888888899999987 4776654445557788
Q ss_pred EecCCcchHHHHHHHHHHHHHH-HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 379 YLQKSDDEVASKKLLQTICDMC-IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
.++... ...++..++ .++||.+.++..+. ....+++|++++ ...+.+.+.++.|.+
T Consensus 332 ~~~~~~-------~~~~~~~~~l~~~gV~v~~g~~f~---~~~~~~iRis~~--~~~~~l~~~l~~l~~ 388 (394)
T PRK05942 332 PCPVGM-------GSTDFALNVLQKTGVVVTPGNAFG---EGGEGYVRISLI--ADCDRLGEALDRLKQ 388 (394)
T ss_pred ECCCCC-------CHHHHHHHHHHHCCEEEeCChhhC---cCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 876533 234566554 46799998865431 123579999996 345555555555543
No 165
>PRK08960 hypothetical protein; Provisional
Probab=99.95 E-value=2e-25 Score=221.29 Aligned_cols=333 Identities=11% Similarity=0.068 Sum_probs=223.6
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTSA 154 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~~ 154 (457)
|.+++++..+.+ ++...+.+.+++.+.+...... +....|..+..+.+++.+.+..| .+++++++++++++.
T Consensus 31 ~~~~i~l~~g~~-~~~~~~~v~~a~~~~~~~~~~~---Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 106 (387)
T PRK08960 31 GHDVIHLEIGEP-DFTTAEPIVAAGQAALAAGHTR---YTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALL 106 (387)
T ss_pred CCCeEEeCCCCC-CCCCCHHHHHHHHHHHhcCCCc---cCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHH
Confidence 456788887655 4445688999998888642111 11123444444444444433223 345677777889999
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY 227 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~ 227 (457)
.++.+++++||.|++..+.|......+...|.++..++. .|++++++.+++ +++++++.+++
T Consensus 107 ~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-----------~~~~i~i~~p~ 175 (387)
T PRK08960 107 LASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNA-----------DTVGALVASPA 175 (387)
T ss_pred HHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCc-----------cceEEEEECCC
Confidence 999999999999999999999988888888888776653 256777776643 34566777789
Q ss_pred CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecH
Q psy15447 228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSS 301 (457)
Q Consensus 228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~ 301 (457)
||+|.+.+ +.+|+++|++||+++|+||+|....++.... ......+ + .++++||||.+|.+| ||+++++
T Consensus 176 NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~---~~~~~~~-~-vi~~~S~SK~~g~~GlRiG~~~~~~ 250 (387)
T PRK08960 176 NPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAA---SVLEVDD-D-AFVLNSFSKYFGMTGWRLGWLVAPP 250 (387)
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC---ChhhccC-C-EEEEeecccccCCcccEEEEEEcCH
Confidence 99999998 4577778999999999999987544432111 1222322 2 488999999998665 9999999
Q ss_pred HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH-H-hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEe-ccCCCCeEEE
Q psy15447 302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHL-L-KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQ-GHRDTPLKYL 378 (457)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~-~-~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~i 378 (457)
++++.+......+.. +.+.+...++.+.+.. . +...+.++.++++.+.+.+.|++ .++.+. .+.++.++|+
T Consensus 251 ~~~~~~~~~~~~~~~--~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~----~~~~~~~~p~g~~f~~~ 324 (387)
T PRK08960 251 AAVPELEKLAQNLYI--SASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRE----LGFGIAVEPQGAFYLYA 324 (387)
T ss_pred HHHHHHHHHHhhhcc--CCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHh----cCCcCCcCCCeeEEEEE
Confidence 998887654332222 2355555555555531 1 11124566778888889999987 455442 3455677788
Q ss_pred EecC-CcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 379 YLQK-SDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 379 ~~~~-~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
.++. .. ...+++++|+ ++||.+.++..+.. ....+++|+++.. +.++++++++.|.+++
T Consensus 325 ~~~~~~~-------~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~~~iRi~~~~--~~~~l~~al~~l~~~~ 385 (387)
T PRK08960 325 DISAFGG-------DAFAFCRHFLETEHVAFTPGLDFGR--HQAGQHVRFAYTQ--SLPRLQEAVERIARGL 385 (387)
T ss_pred eccccCC-------CHHHHHHHHHHhCCEEEcCchHhCC--CCCCCeEEEEecC--CHHHHHHHHHHHHHHH
Confidence 7764 22 3457888876 57999998765421 1234699999985 6777887777777654
No 166
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=1.8e-25 Score=220.55 Aligned_cols=319 Identities=13% Similarity=0.087 Sum_probs=225.0
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASA 156 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~a 156 (457)
+..+|||..|.. .++..|.+.+++.+. .... . |.. ....+|++.++++++.+ .+++++++++++..+
T Consensus 51 ~~~~i~l~~n~~-p~~~~~~v~~a~~~~-~~~~-~-------Yp~-~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~ 119 (380)
T PLN03026 51 PEDIVKLDANEN-PYGPPPEVLEALGNM-KFPY-V-------YPD-PESRRLRAALAEDSGLESENILVGCGADELIDLL 119 (380)
T ss_pred ccceEEccCCCC-CCCCCHHHHHHHHhh-Hhhc-c-------CCC-CCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHH
Confidence 568899988743 233457788877542 1110 0 111 22578999999999854 344444555788888
Q ss_pred HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447 157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA 231 (457)
Q Consensus 157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G 231 (457)
+.+++++||.|++..+.|..+....+..|.++..++.+ |++++++.+.. .++++|++++++||+|
T Consensus 120 ~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~----------~~~~~v~l~~P~NPTG 189 (380)
T PLN03026 120 MRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVET----------HKPKLLFLTSPNNPDG 189 (380)
T ss_pred HHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhc----------cCCcEEEEeCCCCCCC
Confidence 88899999999999999887777778889888877542 57778777632 2456888888999999
Q ss_pred CCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHH
Q psy15447 232 DICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHR 308 (457)
Q Consensus 232 ~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~ 308 (457)
.+.|.+++.++++.. +++|+||+|...... +. .... +...+..|+++||||.+|.+| ||+++++++++.+.
T Consensus 190 ~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~--~~-~~~~--~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i~~l~ 263 (380)
T PLN03026 190 SIISDDDLLKILELP-ILVVLDEAYIEFSTQ--ES-RMKW--VKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 263 (380)
T ss_pred CCCCHHHHHHHHhcC-CEEEEECcchhhcCC--cc-hHHH--HHhCCCEEEEecchHhhcCccccceeeecCHHHHHHHH
Confidence 999999999999865 999999998643221 11 1111 111123588999999998777 99999999998886
Q ss_pred hhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHH
Q psy15447 309 LSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVA 388 (457)
Q Consensus 309 ~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 388 (457)
.....+ +.+.++..++.++|+..+..++.++.++++.+++.+.|++ +.++.+ .++.++++++.++...
T Consensus 264 ~~~~~~----~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~---~~~~~~-~p~~~~f~~~~~~~~~---- 331 (380)
T PLN03026 264 RAKQPY----NVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKE---VPFLEP-YPSDANFILCRVTSGR---- 331 (380)
T ss_pred HhcCCC----CCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH---CCCCeE-CCCCCeEEEEECCCCC----
Confidence 554332 3455666666666642221234667788888899999988 333444 3567888888876432
Q ss_pred HHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 389 SKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 389 ~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
...++++.|.++||.+++... +..++++||++. +++++++++++|+++
T Consensus 332 ---~~~~~~~~l~~~gI~v~~~~~-----~~~~~~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 332 ---DAKKLKEDLAKMGVMVRHYNS-----KELKGYIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred ---CHHHHHHHHHHCCeEEEECCC-----CCCCCEEEEecC---CHHHHHHHHHHHHHh
Confidence 345789999999999986532 223579999986 788999999999764
No 167
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=2.7e-25 Score=217.86 Aligned_cols=319 Identities=13% Similarity=0.124 Sum_probs=226.6
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASA 156 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~a 156 (457)
++.+|||+.+.. .++.+|.+.+++.+.+...-.. |... ...+|++.+|++++.+ ++++++++++++..+
T Consensus 23 ~~~~i~l~~~~~-~~~~~~~~~~a~~~~~~~~~~~-------y~~~-~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~ 93 (353)
T PRK05387 23 LAKLIKLNTNEN-PYPPSPKVLEAIRAALGDDLRL-------YPDP-NADALRQAIAAYYGLDPEQVFVGNGSDEVLAHA 93 (353)
T ss_pred ccceeeccCCCC-CCCCCHHHHHHHHHHhhhhhhc-------CCCC-cHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHH
Confidence 457899988754 3444688999998877641111 1111 2368999999998754 456666677899999
Q ss_pred HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447 157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA 231 (457)
Q Consensus 157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G 231 (457)
+.+++++||.|+++.++|..+.......|.++..++.. |++++++ ..+++++.+++||+|
T Consensus 94 ~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~---------------~~~~v~~~~P~NPtG 158 (353)
T PRK05387 94 FLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLR---------------PNGGIIFPNPNAPTG 158 (353)
T ss_pred HHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHh---------------cCCEEEEeCCCCCCC
Confidence 99999999999999999988877788889888777643 4555431 124677888899999
Q ss_pred CCCChHHHHHHHHHc-CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHH
Q psy15447 232 DICPLKDILSLRSKY-QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHH 307 (457)
Q Consensus 232 ~i~~l~~i~~l~~~~-g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~ 307 (457)
.+.|.+++.++++++ ++++|+||+|.. ++. ......... .+.+++++||||.+|.+| ||+++++++++.+
T Consensus 159 ~~~~~~~~~~l~~~~~~~~livDe~y~~--~~~--~~~~~~~~~--~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l 232 (353)
T PRK05387 159 IALPLAEIERILAANPDSVVVIDEAYVD--FGG--ESAIPLIDR--YPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEAL 232 (353)
T ss_pred CCCCHHHHHHHHHhCCCcEEEEeCcccc--cCC--cchHHHHhh--CCCEEEEEehhHhhcchhhhceeeecCHHHHHHH
Confidence 999999999999876 999999999863 221 111111111 123699999999998766 9999999998888
Q ss_pred HhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchH
Q psy15447 308 RLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEV 387 (457)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 387 (457)
+.....+ .+.+.+.+..+++.++++..+..++.+++++++.+++.+.|++ .|+.+. ++.++++++.++. .
T Consensus 233 ~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~~~~~~~~~-~--- 302 (353)
T PRK05387 233 NRVKNSF-NSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEA----LGFEVL-PSKANFVFARHPS-H--- 302 (353)
T ss_pred HHhhccC-CCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCCeEC-CCcCcEEEEECCC-C---
Confidence 6543221 1223466666666666642222234677888889999999988 466654 4567777777653 2
Q ss_pred HHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 388 ASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 388 ~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
...++++.|.++||.++.... +...+++|++++ +++++++++++|++++.
T Consensus 303 ----~~~~~~~~l~~~gi~v~~~~~-----~~~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 303 ----DAAELAAKLRERGIIVRHFNK-----PRIDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred ----CHHHHHHHHHHCCEEEEECCC-----CCCCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 345788999999999975432 223579999986 78999999999988753
No 168
>PRK08175 aminotransferase; Validated
Probab=99.95 E-value=3.6e-25 Score=219.89 Aligned_cols=345 Identities=14% Similarity=0.106 Sum_probs=230.7
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----C-cEEEecccHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----E-ETALYSFGFSTS 153 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~-~~i~~~sG~~a~ 153 (457)
|++++||..+++... ..+.+.+++.+.+..... ..+....|..++...+++.+.+..|. + .+++++++++++
T Consensus 28 ~~~~i~l~~g~p~~~-~~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l 104 (395)
T PRK08175 28 GEDIIDFSMGNPDGP-TPPHIVEKLCEVAQRPDT--HGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGL 104 (395)
T ss_pred CCCeEEcCCCCCCCC-CCHHHHHHHHHHHhCCCc--CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence 567899987765433 346677777776643111 11222234555555555555544342 3 344444555788
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN 229 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~ 229 (457)
..++.+++++||.|+++.++|......+...|.++..++.+ +++++++.+++.. ++++++++.+++||
T Consensus 105 ~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~--------~~~~~v~i~~p~NP 176 (395)
T PRK08175 105 AHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESY--------PKPKMMILGFPSNP 176 (395)
T ss_pred HHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCCcHHHHHHHHhhcc--------CCceEEEEeCCCCC
Confidence 88888899999999999999988777778889888777543 4778888776532 34567778888999
Q ss_pred CCCCCCh---HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC-CCccEEEecCcccccCcc---cEEEecHH
Q psy15447 230 SADICPL---KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST-EEVDMIIGSLEHALGSVG---GFCVGSSY 302 (457)
Q Consensus 230 ~G~i~~l---~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~-~~~Di~~~s~sK~lg~~g---G~v~~~~~ 302 (457)
+|.+.+. ++|.++|++||+++|+||+|+...++. ........+.. .+..++++||||.+|.+| ||++++++
T Consensus 177 tG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~ 254 (395)
T PRK08175 177 TAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDG--WKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPE 254 (395)
T ss_pred CCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCC--CCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCHH
Confidence 9999996 799999999999999999997554432 11111111211 133478899999998665 99999999
Q ss_pred HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEec
Q psy15447 303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ 381 (457)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~ 381 (457)
+++.+........++. +.....++.+.+...+. ...+++.++++.+++.+.|++ .++.+..+.+++++|+.++
T Consensus 255 l~~~~~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~p~~g~~i~i~l~ 328 (395)
T PRK08175 255 LVSALARIKSYHDYGT--FTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHE----AGWMVEMPKASMYVWAKIP 328 (395)
T ss_pred HHHHHHHHHhhcccCC--CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----cCCcccCCCEEEEEEEECC
Confidence 9998765432222322 33344445555532111 134567788888999999988 4666654557889999887
Q ss_pred CCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 382 KSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
..... ....+++++++ ++||.+.++..+. ....+++||++. .+++.++++++.|.+++++.
T Consensus 329 ~~~~~----~~~~~~~~~l~~~~gv~v~p~~~f~---~~~~~~lRis~~--~~~~~~~~al~~l~~~l~~~ 390 (395)
T PRK08175 329 EPYAA----MGSLEFAKKLLNEAKVCVSPGIGFG---DYGDTHVRFALI--ENRDRIRQAIRGIKAMFRAD 390 (395)
T ss_pred cccCC----CCHHHHHHHHHHhCCEEEeCchhhC---cCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHhc
Confidence 54200 02457887776 5799998875421 123468999986 57899999999999888754
No 169
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.95 E-value=4.1e-25 Score=221.64 Aligned_cols=350 Identities=14% Similarity=0.107 Sum_probs=246.3
Q ss_pred eeeEEeecCCc-cCCCCChhhHHHHHHHHHhcCCC-CCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHH
Q psy15447 80 IPCINFATHNY-LSFVENPDIEKCAIDCIDKNGVG-SCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTS 153 (457)
Q Consensus 80 ~~~id~~s~~~-l~~~~~p~i~~a~~~~l~~~~~~-~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~ 153 (457)
...++|+.+.. ..+.+...+.++..+.++.+... ...+....|..++...+.+.+....| .++++++++..+|+
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al 168 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL 168 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHH
Confidence 67788887642 12334567777877777765433 11222223445555555555553334 23345555555899
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN 229 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~ 229 (457)
..+.+.++++||.|+++.++|......++..|.++..++.+ |+++|++.++... .+.++++.+.+||
T Consensus 169 ~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~---------~k~~y~~P~~qNP 239 (459)
T COG1167 169 DLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWK---------PKAVYVTPTFQNP 239 (459)
T ss_pred HHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcC---------CcEEEECCCCCCC
Confidence 99999999999999999999999999999999999988754 7999999998632 3456667778899
Q ss_pred CCCCCCh---HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc--CcccEEEecHHHH
Q psy15447 230 SADICPL---KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG--SVGGFCVGSSYII 304 (457)
Q Consensus 230 ~G~i~~l---~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg--~~gG~v~~~~~~~ 304 (457)
+|..+++ ++|.++|++||+++|.||.++...+.. .........+..+..|+++||||.+. ...||+++++.++
T Consensus 240 tG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~--~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~~~ 317 (459)
T COG1167 240 TGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDG--PPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPELI 317 (459)
T ss_pred CCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCC--CCCCChHhhCCCCCEEEEeeehhhcccccceeeeeCCHHHH
Confidence 9999996 499999999999999999998766543 22212233333445699999999995 4669999999999
Q ss_pred HHHHhhCCcceecCCCcHHHHHHHHHHHH---HHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEec
Q psy15447 305 EHHRLSGSGYCFSASLPPFLAVAANKALH---LLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ 381 (457)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~aaa~a~l~---~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~ 381 (457)
+.+.........++ +.+...+...-+. +.+....+++.++++.+.+.+.|++... ..+.+..+.++.++|+.++
T Consensus 318 ~~~~~~k~~~~~~~--s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~-~~~~~~~p~gG~flwl~l~ 394 (459)
T COG1167 318 EKLLRLKQAADLGP--SSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLP-ELATWTRPEGGLFLWLELP 394 (459)
T ss_pred HHHHHHHHHhcCCC--ChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeeeecCCceEEEEEEcC
Confidence 88865443333332 4443333322222 1112245677888888899898887321 2466666677899999999
Q ss_pred CCcchHHHHHHHHHHHHHHHHcCeeEec-cccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 382 KSDDEVASKKLLQTICDMCIQAGFAITC-PSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~l~~~Gi~v~~-~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
... +..++.+.+.++|+.+.+ +..+... ....+.+|++++. .+++++++.+..|.+++.+..
T Consensus 395 ~~~-------~~~~l~~~a~~~gv~i~~~g~~f~~~-~~~~~~~Rl~~s~-~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 395 EGI-------DARELLAAALEKGVVVTPLGSAFSAD-GDPRNGLRLSFSS-PSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred CCC-------CHHHHHHHHHHCCCEEEcCCccccCC-CCCCCeEEEEcCC-CCHHHHHHHHHHHHHHHHHHh
Confidence 876 667899999999999988 5443221 1145699999976 579999999999998887654
No 170
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.95 E-value=3.8e-26 Score=227.59 Aligned_cols=326 Identities=15% Similarity=0.103 Sum_probs=213.7
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCC--CCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSC--GPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASA 156 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~--~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~a 156 (457)
.+++++.+++ ++. +|.+.+++.+++ ..-..++ .+....|..+...++++++++++|.+ .++++++|+.+...+
T Consensus 21 ~~~~l~~g~~-~~~-~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~ 97 (398)
T cd00613 21 SMSFLGSGTY-KHN-PPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAA 97 (398)
T ss_pred Cccccccccc-CCc-CcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHH
Confidence 3455554443 554 677766666555 2111111 11114567788999999999999976 666777666554444
Q ss_pred -HHhhcCC--CCEEEEeCcccHHHHHHHHhcC----CeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEe
Q psy15447 157 -IAAYVKR--NDAVFVDENINFAIQTGLIASR----CKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVE 224 (457)
Q Consensus 157 -i~a~~~~--gd~v~~~~~~h~~~~~~~~~~g----~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e 224 (457)
+.+...+ ||.|++..++|+++...+...+ .+++.++.+ |++++++.+. +++++|+++
T Consensus 98 ~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-----------~~t~~viv~ 166 (398)
T cd00613 98 GLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVS-----------EEVAALMVQ 166 (398)
T ss_pred HHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcC-----------CCeEEEEEE
Confidence 4444555 9999999999999988888777 777777654 5677777663 346788888
Q ss_pred cCCCCCCCCCCh-HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc------CcccEE
Q psy15447 225 GVYMNSADICPL-KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG------SVGGFC 297 (457)
Q Consensus 225 ~v~~~~G~i~~l-~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg------~~gG~v 297 (457)
+++ ++|.+.++ ++|+++|++||+++|+|++|+.+. +. ..... .++|++++|++|+++ ..+|++
T Consensus 167 ~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~-~~---~~~~~-----~~~d~~~~s~~K~~~p~g~Ggp~~g~l 236 (398)
T cd00613 167 YPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLT-GL---KPPGE-----YGADIVVGNLQKTGVPHGGGGPGAGFF 236 (398)
T ss_pred CCC-CCceecchHHHHHHHHHhcCCEEEEEecccccc-CC---CChHH-----cCCCEEEeeccccCCCCCCCCCceeEE
Confidence 875 78999885 999999999999999999986543 11 11111 245899999999982 235788
Q ss_pred EecHHHHHHHHhhC---------------------------CcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHH
Q psy15447 298 VGSSYIIEHHRLSG---------------------------SGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREK 348 (457)
Q Consensus 298 ~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~ 348 (457)
+.++++++.+.... .+..+..+.++..++++.++++.+... ++.+++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~ 316 (398)
T cd00613 237 AVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLN 316 (398)
T ss_pred EEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 88888777542110 000011122455555555555554332 3467889999
Q ss_pred HHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe
Q psy15447 349 CNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC 428 (457)
Q Consensus 349 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~ 428 (457)
++++++.|++ +.+.........+.+++.+.... .....++++.|+++||++.... +...+.+|++|
T Consensus 317 ~~~l~~~L~~---~~~~~~~~~~~~~~v~~~~~~~~-----~~~~~~~~~~L~~~gi~~~~~~------~~~~~~lRis~ 382 (398)
T cd00613 317 ANYLAKRLKE---VGGVLPFNGPFFHEFVLRLPPLY-----GIRAEDLAKALIDGGFHAPTMY------LPVDGTLMIEP 382 (398)
T ss_pred HHHHHHHHHh---cCCcccCCCCeeEEEEEEcCCcc-----hHHHHHHHHhhhhcCccccccc------cCCCCeEEEEc
Confidence 9999999988 22222111112233445544310 0146689999999999865432 12357899999
Q ss_pred cCCCCHHHHHHHHHHH
Q psy15447 429 NISHTEQDMNSLIETL 444 (457)
Q Consensus 429 ~~~~t~edi~~~~~~l 444 (457)
+..+|++|||+++++|
T Consensus 383 ~~~~t~edid~~~~~L 398 (398)
T cd00613 383 TETETKEELDALLEAL 398 (398)
T ss_pred CCCCCHHHHHHHHHhC
Confidence 9999999999999864
No 171
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.95 E-value=3.2e-25 Score=220.43 Aligned_cols=337 Identities=13% Similarity=0.090 Sum_probs=227.7
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-----C-cEEEecccHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-----E-ETALYSFGFS 151 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-----~-~~i~~~sG~~ 151 (457)
.|++++||..+.+ .+...+.+.+++.+.+... . .+....|..++...+++.+.+..|. + .+++++++++
T Consensus 27 ~~~~~i~l~~~~p-~~~~~~~~~~~~~~~~~~~-~---~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~ 101 (396)
T PRK09147 27 ADLPPISLSIGEP-KHPTPAFIKDALAANLDGL-A---SYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSRE 101 (396)
T ss_pred cCCCeEecCCCCC-CCCCCHHHHHHHHHHhhhh-c---CCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHH
Confidence 4789999988764 3444677888887766432 1 1222345556666666666555463 2 3444556668
Q ss_pred HHHHHHHhhcCC---CCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447 152 TSASAIAAYVKR---NDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFI 221 (457)
Q Consensus 152 a~~~ai~a~~~~---gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~v 221 (457)
++..++.+++++ ||.|+++.++|..+...++..|.++..++. .|++++++.+.+ +++++
T Consensus 102 al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~-----------~~k~i 170 (396)
T PRK09147 102 ALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWA-----------RTQLL 170 (396)
T ss_pred HHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhh-----------ccEEE
Confidence 999999999999 899999999998888888888988887764 256777665532 34677
Q ss_pred EEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCc--ccc---ccCCCCCCccEEEecCcccccCc
Q psy15447 222 IVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHG--VTE---YFGVSTEEVDMIIGSLEHALGSV 293 (457)
Q Consensus 222 i~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~--~~~---~~~~~~~~~Di~~~s~sK~lg~~ 293 (457)
++.+++||+|.+.+ +++|.++|++|+++||+||+|+...+...... ... ..+....+..|+++||||.+|.+
T Consensus 171 ~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~ 250 (396)
T PRK09147 171 FVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVP 250 (396)
T ss_pred EEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCc
Confidence 77789999999987 67888899999999999999986554321011 010 11111012249999999998776
Q ss_pred c---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc
Q psy15447 294 G---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH 370 (457)
Q Consensus 294 g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~ 370 (457)
| ||+++++++++.+...... .+.+.+++..+++.+.+...+...+.++.++++.+.+.+.|++ . +.+..+
T Consensus 251 GlRiG~~~~~~~l~~~~~~~~~~--~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~----~-~~~~~p 323 (396)
T PRK09147 251 GLRSGFVAGDAALLKKFLLYRTY--HGCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAP----V-LDVQLP 323 (396)
T ss_pred cceeeeecCCHHHHHHHHHHhhh--cccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHH----h-cCCCCC
Confidence 6 9999999998887643321 2223456665665555532111123566777888888888876 2 334345
Q ss_pred CCCCeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccc---cCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 371 RDTPLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQE---AKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 371 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~---~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
.++.++|+.++. ...++++.|+ ++||.+.++..+... .....+++||+++. +++++++++++|++
T Consensus 324 ~~g~f~~~~~~~---------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~--~~~~l~~~l~rl~~ 392 (396)
T PRK09147 324 DAGFYLWAKVPG---------DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA--PLAECVEAAERIVD 392 (396)
T ss_pred CeeEEEEEECCC---------CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC--CHHHHHHHHHHHHH
Confidence 678888888762 2346777776 579999987654220 11235789999874 68899999999987
Q ss_pred HH
Q psy15447 447 SH 448 (457)
Q Consensus 447 ~~ 448 (457)
++
T Consensus 393 ~~ 394 (396)
T PRK09147 393 FC 394 (396)
T ss_pred Hh
Confidence 65
No 172
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.95 E-value=6.6e-25 Score=218.55 Aligned_cols=347 Identities=15% Similarity=0.101 Sum_probs=227.8
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----C-cEEEecccHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----E-ETALYSFGFST 152 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~-~~i~~~sG~~a 152 (457)
.|.+++||..+++... ..+.+.+++.+.+.... ..++....|..++...+++.+.+..|. + ++++++++.++
T Consensus 31 ~~~~~~~l~~g~p~~~-~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~a 107 (403)
T PRK08636 31 AGEDIIDFSMGNPDGP-TPQHIIDKLCESAQKPK--THGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEG 107 (403)
T ss_pred cCCCEEEcCCcCCCCC-CCHHHHHHHHHHhcCCc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHH
Confidence 3567899987655332 23456666665553311 112222345556666666666555452 3 34555555689
Q ss_pred HHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHH----HHHHHHhhchhcccCCCCccEEE
Q psy15447 153 SASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQH----LEELLRQQDERDTLNSKVTKKFI 221 (457)
Q Consensus 153 ~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~----le~~l~~~~~~~~~~~~~~~~~v 221 (457)
+..++.+++++||.|+++.++|..+...+...|.++..++. .|+++ +++.+++.. .+++++
T Consensus 108 l~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~--------~~~~~i 179 (403)
T PRK08636 108 YVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESS--------PKPKYV 179 (403)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhcc--------CCceEE
Confidence 99999999999999999999999998889999999877653 24554 344444321 356788
Q ss_pred EEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC-CCccEEEecCcccccCcc---
Q psy15447 222 IVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST-EEVDMIIGSLEHALGSVG--- 294 (457)
Q Consensus 222 i~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~-~~~Di~~~s~sK~lg~~g--- 294 (457)
++.+++||+|.+.+ +++|.++|++|++++|+||+|+...+.. ........++. .+..++++||||.+|.+|
T Consensus 180 ~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRi 257 (403)
T PRK08636 180 VVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDG--YKTPSILEVEGAKDVAVESYTLSKSYNMAGWRV 257 (403)
T ss_pred EEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCC--CCCCChhcCCCccccEEEEEecccccCCcccee
Confidence 88888999999998 5788899999999999999998654432 11111112211 123467899999997655
Q ss_pred cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCC
Q psy15447 295 GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDT 373 (457)
Q Consensus 295 G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~ 373 (457)
||+++++++++.+........++. +.+...++..+++...+ ..++++.++++.+.+.+.|++ .++.+..+..+
T Consensus 258 G~iv~~~~li~~~~~~~~~~~~~~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~g 331 (403)
T PRK08636 258 GFVVGNKKLVGALKKIKSWLDYGM--FTPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFAN----AGWELQKPRAS 331 (403)
T ss_pred eeeeCCHHHHHHHHHHHHHhcccC--ChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCcc
Confidence 999999999888765432212222 23333333333321111 123566777888888888888 46666555678
Q ss_pred CeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 374 PLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 374 ~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
.++|+.++..... ....++++.++ ++||.+.++..+. ....+++||++. .+++++++.++.|+++++..+
T Consensus 332 ~~~~~~l~~~~~~----~~~~~l~~~ll~~~gV~v~pg~~f~---~~~~~~iRi~~~--~~~~~l~~~~~rl~~~l~~~~ 402 (403)
T PRK08636 332 MFVWAKIPEPARH----LGSLEFSKQLLTEAKVAVSPGIGFG---EYGDEYVRIALI--ENENRIRQAARNIKKFLKELE 402 (403)
T ss_pred eEEEEECCCccCC----CCHHHHHHHHHHhCCEEEecchhhC---cCCCCeEEEEec--CCHHHHHHHHHHHHHHHHhhc
Confidence 8889988643200 02356777755 5799999876432 123579999996 589999999999999887643
No 173
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=5e-25 Score=215.40 Aligned_cols=317 Identities=14% Similarity=0.167 Sum_probs=224.3
Q ss_pred eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC-cEEEeccc-HHHHHHHHHh
Q psy15447 82 CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE-ETALYSFG-FSTSASAIAA 159 (457)
Q Consensus 82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG-~~a~~~ai~a 159 (457)
.++|..|.. .+...+.+.+++.+.+...... .|. .+...+|++.+|++++.+ +.+++++| ++++..++.+
T Consensus 24 ~~~l~~~~~-~~~~p~~~~~a~~~~~~~~~~~------~y~-~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~ 95 (351)
T PRK14807 24 KYKMDANET-PFELPEEVIKNIQEIVKSSQVN------IYP-DPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLA 95 (351)
T ss_pred eeEccCCCC-CCCCCHHHHHHHHHHhhcCccc------CCC-CccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHH
Confidence 467777654 4555688999988877532111 111 122478999999999864 34445545 5778888889
Q ss_pred hcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC
Q psy15447 160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC 234 (457)
Q Consensus 160 ~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~ 234 (457)
++++||.|++..++|..+...++..|.++..++. .|++++++.++. .+++++++++++||+|.+.
T Consensus 96 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~----------~~~k~v~l~~p~NPtG~~~ 165 (351)
T PRK14807 96 FINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEK----------YQPKLVFLCNPNNPTGSVI 165 (351)
T ss_pred hcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhc----------cCCCEEEEeCCCCCCCCCC
Confidence 9999999999999988877777888988887753 267888877753 2456777778999999999
Q ss_pred ChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhC
Q psy15447 235 PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSG 311 (457)
Q Consensus 235 ~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~ 311 (457)
+.+++.++|++++.++|+||+|... .+. ....... ..+..|+++||||.+|.+| ||+++++++++.++...
T Consensus 166 ~~~~l~~l~~~~~~~~ivDe~y~~~-~~~---~~~~~~~--~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~ 239 (351)
T PRK14807 166 EREDIIKIIEKSRGIVVVDEAYFEF-YGN---TIVDVIN--EFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVK 239 (351)
T ss_pred CHHHHHHHHHhCCCEEEEeCcchhh-ccc---chHHHhh--hCCCEEEEecchHhcccchhceeeeecCHHHHHHHHHcc
Confidence 9999999999999999999998632 232 1111111 1123599999999998766 99999999999887543
Q ss_pred CcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHH
Q psy15447 312 SGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKK 391 (457)
Q Consensus 312 ~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 391 (457)
.. + +.+++...++.+.++. ....+..+.++++.+++.+.|++ .+|+.+. +++++++++.+.+
T Consensus 240 ~~--~--~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~r~~l~~~l~~---~~g~~~~-~~~~~~~~i~~~~--------- 301 (351)
T PRK14807 240 SP--Y--NINSLSQVIALKVLRT-GVLKERVNYILNERERLIKELSK---IPGIKVY-PSKTNFILVKFKD--------- 301 (351)
T ss_pred CC--C--CcCHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHh---CCCcEEC-cCCccEEEEEcCC---------
Confidence 22 2 2355555555555542 11233456677788888888876 4677664 5567788877753
Q ss_pred HHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 392 LLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 392 ~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
..++++.|+++||.+++.... +...+++||++. +.++.++++++|++++
T Consensus 302 -~~~~~~~l~~~gV~v~~~~~~----~~~~~~iRis~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 302 -ADYVYQGLLERGILVRDFSKV----EGLEGALRITVS---SCEANDYLINGLKELL 350 (351)
T ss_pred -HHHHHHHHHHCCEEEEECCCC----CCCCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence 246888899999999764311 223578999986 6889999999998753
No 174
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.95 E-value=3.2e-25 Score=216.87 Aligned_cols=333 Identities=14% Similarity=0.119 Sum_probs=222.7
Q ss_pred EeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHHHHHHHh
Q psy15447 84 NFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTSASAIAA 159 (457)
Q Consensus 84 d~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~~~ai~a 159 (457)
|++.+++ .+..+|.+.++..+ ..++.....+....|..+....+++.+....+ .+..+++++|++++..++.+
T Consensus 2 ~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~ 78 (350)
T cd00609 2 DLSIGEP-DFPPPPEVLEALAA--AALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRA 78 (350)
T ss_pred CCCCCCC-CCCCCHHHHHHHHH--HhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHH
Confidence 5555555 44556777766655 23332222222223344444444444444333 34567788889999999999
Q ss_pred hcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHH---HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCCh
Q psy15447 160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHL---EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPL 236 (457)
Q Consensus 160 ~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~l---e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l 236 (457)
+.++||.|+++.+.|.++...++..+.++..++.++.... ++.++... .+++++|+++++++++|.+.|+
T Consensus 79 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-------~~~~~~v~i~~~~~~tG~~~~~ 151 (350)
T cd00609 79 LLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAK-------TPKTKLLYLNNPNNPTGAVLSE 151 (350)
T ss_pred hCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhc-------CccceEEEEECCCCCCCcccCH
Confidence 9999999999999999999999999988887776532111 11222111 1456788888999999999985
Q ss_pred H---HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc---ccEEEecH-HHHHHHHh
Q psy15447 237 K---DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV---GGFCVGSS-YIIEHHRL 309 (457)
Q Consensus 237 ~---~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~---gG~v~~~~-~~~~~~~~ 309 (457)
+ +|+++|+++|+++|+||+|+.+.++..... ........+.|++++|++|.++.. .|++++++ ++.+.++.
T Consensus 152 ~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~ 229 (350)
T cd00609 152 EELEELAELAKKHGILIISDEAYAELVYDGEPPP--ALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKK 229 (350)
T ss_pred HHHHHHHHHHHhCCeEEEEecchhhceeCCcccc--cccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHH
Confidence 5 555899999999999999987655433221 111222234589999999999743 38998988 78888865
Q ss_pred hCCcceecCCCcHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHH
Q psy15447 310 SGSGYCFSASLPPFLAVAANKALHLL-KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVA 388 (457)
Q Consensus 310 ~~~~~~~~~~~~~~~~aaa~a~l~~~-~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 388 (457)
..... +.+.++..+.++...++.. +..+...++++++.+++.+.|++. .......+..+.++++.+....
T Consensus 230 ~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~g~~~~~~~~~~~---- 300 (350)
T cd00609 230 LLPYT--TSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKEL---GPLVVVKPSGGFFLWLDLPEGD---- 300 (350)
T ss_pred HHHhc--ccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhc---CCccccCCCccEEEEEecCCCC----
Confidence 54322 2334666666666666655 233456778889999999999882 2222122445667777766542
Q ss_pred HHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447 389 SKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLC 445 (457)
Q Consensus 389 ~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 445 (457)
....+.+.|.++||.+.+...+. ....+++|++++.. ++|+++++++|+
T Consensus 301 ---~~~~~~~~l~~~gi~i~~~~~~~---~~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 301 ---DEEFLERLLLEAGVVVRPGSAFG---EGGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred ---hHHHHHHHHHhCCEEEecccccc---cCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 34456677777799998765432 12467999999886 999999999986
No 175
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.95 E-value=2.2e-25 Score=210.35 Aligned_cols=335 Identities=16% Similarity=0.139 Sum_probs=243.3
Q ss_pred eEEeecCCccCCCCChhhHHHHHHHHHhc-CCCCCCCCCccc--ChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHH
Q psy15447 82 CINFATHNYLSFVENPDIEKCAIDCIDKN-GVGSCGPRGFYG--TNVVHLDLENDIASFMGLE--ETALYSFGFSTSASA 156 (457)
Q Consensus 82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~-~~~~~~~~~~~g--~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~a 156 (457)
|+|.+...+ -.|++.+++...+... |..+ +...+| .....++.++.+|+++|.+ +++|+++|++++..+
T Consensus 4 YlD~~ATTp----~~~~v~~~m~~~~~~~fgNPs--S~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNla 77 (386)
T COG1104 4 YLDNAATTP----VDPEVLEAMLPYLTEVFGNPS--SLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLA 77 (386)
T ss_pred cccccccCC----CCHHHHHHHHHHHHhhcCCcc--chhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHH
Confidence 556555332 3689999999999875 4322 222334 3566777889999999954 567778889999999
Q ss_pred HHh--hc----CCCCEEEEeCcccHHHHHHHHhc---CCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447 157 IAA--YV----KRNDAVFVDENINFAIQTGLIAS---RCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFII 222 (457)
Q Consensus 157 i~a--~~----~~gd~v~~~~~~h~~~~~~~~~~---g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi 222 (457)
|+. .. +++.+|++..-.|.++...++.. |.++.+.+.+ |+++|+++|+. ++.+|.
T Consensus 78 I~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~~-----------~T~LVS 146 (386)
T COG1104 78 IKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALRP-----------DTILVS 146 (386)
T ss_pred HHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcCC-----------CceEEE
Confidence 886 22 26789999999999999887766 7888877765 79999999863 578999
Q ss_pred EecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecH
Q psy15447 223 VEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSS 301 (457)
Q Consensus 223 ~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~ 301 (457)
+-.++|.+|.+.|+++|.++|+++|+++++|.+|++|.+. .++....+|++..|-||..|+.| |++..++
T Consensus 147 im~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkip---------i~~~~~~vD~ls~SaHK~~GpkGiGaLyv~~ 217 (386)
T COG1104 147 IMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIP---------IDLEELGVDLLSFSAHKFGGPKGIGALYVRP 217 (386)
T ss_pred EEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCcee---------ccccccCcceEEeehhhccCCCceEEEEECC
Confidence 9999999999999999999999999999999999987653 22322347999999999998766 7766554
Q ss_pred HHH-HHHHhhCCcc---eecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC---CC
Q psy15447 302 YII-EHHRLSGSGY---CFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR---DT 373 (457)
Q Consensus 302 ~~~-~~~~~~~~~~---~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~---~~ 373 (457)
.+. +.+... .++ .-+++.|....++.-+++++..+ .+....++..+.++|.+.|.+. .+.+.+.+.. -.
T Consensus 218 ~~~~~p~i~G-GgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~--~p~~~~~g~~~~rlP 294 (386)
T COG1104 218 GVRLEPLIHG-GGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEI--IPDVYLNGDDEPRLP 294 (386)
T ss_pred CCccCceecc-CcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCcEEEcCCcccCCC
Confidence 332 212111 111 12334455555555555554433 3556788999999999999872 2667766543 24
Q ss_pred CeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc--------------CCCCCeEEEEecCCCCHHHHHH
Q psy15447 374 PLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA--------------KKQKPSIRITCNISHTEQDMNS 439 (457)
Q Consensus 374 ~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--------------~~~~~~lRi~~~~~~t~edi~~ 439 (457)
+++.+.++.- ....+...|..+||+++.+..|.... ......+||+++..+|++|+|+
T Consensus 295 ~~~~~~f~gv--------~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~ 366 (386)
T COG1104 295 NILNFSFPGV--------EGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDA 366 (386)
T ss_pred CeEEEEeCCC--------cHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHH
Confidence 4566666654 34567777778899999888776511 1125689999999999999999
Q ss_pred HHHHHHHHHHHhcC
Q psy15447 440 LIETLCKSHDIAVQ 453 (457)
Q Consensus 440 ~~~~l~~~~~~~~~ 453 (457)
++++++++++.++.
T Consensus 367 ~~~~l~~~i~~lr~ 380 (386)
T COG1104 367 AAEALKEIIKRLRE 380 (386)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999988764
No 176
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.95 E-value=3e-25 Score=221.03 Aligned_cols=338 Identities=14% Similarity=0.086 Sum_probs=228.6
Q ss_pred CeeeEEeecCCcc---CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC-------CCcEEEecc
Q psy15447 79 GIPCINFATHNYL---SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG-------LEETALYSF 148 (457)
Q Consensus 79 G~~~id~~s~~~l---~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-------~~~~i~~~s 148 (457)
|+.+++|..+.+- .+...+.+.+++.+.+...... ++....|. .+|++.++++++ .+.++++++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~Y~~~~g~----~~lr~aia~~~~~~~~~~~~~~i~~t~G 103 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYN--GYAPTVGA----LSAREAIASYYHNPDGPIEADDVVLCSG 103 (401)
T ss_pred CCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCC--CCCCCCCC----HHHHHHHHHHHhhcCCCCCHHHEEECcC
Confidence 4678899887653 3556788999988887652111 11111233 456666666654 345667777
Q ss_pred cHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447 149 GFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFI 221 (457)
Q Consensus 149 G~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~v 221 (457)
+++++..++.+++++||.|++..++|..+...+...|.++..++. .|++.+++.+++ +++++
T Consensus 104 ~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~-----------~~~~v 172 (401)
T TIGR01264 104 CSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDE-----------KTAAL 172 (401)
T ss_pred hHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhcc-----------CceEE
Confidence 789999999999999999999999998888888888988877643 257778776643 34677
Q ss_pred EEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---c
Q psy15447 222 IVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---G 295 (457)
Q Consensus 222 i~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G 295 (457)
++++++||+|.+.+ +++|.++|+++|+++|+||+|....+.. ..........+....|+++||||+++.+| |
T Consensus 173 ~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG 250 (401)
T TIGR01264 173 IVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSG--ATFEPLASLSSTVPILSCGGLAKRWLVPGWRLG 250 (401)
T ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCC--cccccHHHcCCCCcEEEEccCcccCCCccceEE
Confidence 88888999999987 7789999999999999999987544422 11111122222222488999999987665 9
Q ss_pred EEEecH------HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH--hhCcHHHHHHHHHHHHHHHHhhcccccCCeEE
Q psy15447 296 FCVGSS------YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL--KANPSLLTKLREKCNTMHSLLSQHKVTQRFLV 367 (457)
Q Consensus 296 ~v~~~~------~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~--~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~ 367 (457)
|+++++ ++++.++.... ..+ +.+++...++.+.++.. +...+.+++++++.+++.+.|++ .+++.+
T Consensus 251 ~iv~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~---~~~~~~ 324 (401)
T TIGR01264 251 WIIIHDRRGILRDIRDGLVKLSQ-RIL--GPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAA---VPGLRP 324 (401)
T ss_pred EEEecCcchhHHHHHHHHHHHhh-ccC--CCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHh---CCCCcc
Confidence 998863 34444443221 112 23455555555555321 11134567788888899999988 346665
Q ss_pred eccCCCCeEEEEecCCc-chHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447 368 QGHRDTPLKYLYLQKSD-DEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLC 445 (457)
Q Consensus 368 ~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 445 (457)
..+.++.++|+.+.... .. .....++++.|+ ++||++.++..+ ...+++|++++. +++++++.+++|.
T Consensus 325 ~~p~~g~f~~~~~~~~~~~~---~~~~~~~~~~l~~~~gI~v~pg~~f-----~~~~~iRis~~~--~~~~l~~~l~rl~ 394 (401)
T TIGR01264 325 VMPSGAMYMMVGIEMEHFPE---FKNDVEFTERLVAEQSVFCLPGSCF-----EYPGFFRVVLTV--PVVMMEEACSRIQ 394 (401)
T ss_pred cCCCeeeEEEEEecccccCC---CCCHHHHHHHHHHhCCEEEeCchhc-----CCCCeEEEEEcC--CHHHHHHHHHHHH
Confidence 55667888888875310 00 002346777876 689999887642 235799999974 6899999999999
Q ss_pred HHHHHh
Q psy15447 446 KSHDIA 451 (457)
Q Consensus 446 ~~~~~~ 451 (457)
++++++
T Consensus 395 ~~~~~~ 400 (401)
T TIGR01264 395 EFCERH 400 (401)
T ss_pred HHHhcc
Confidence 887653
No 177
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.95 E-value=2.3e-25 Score=220.31 Aligned_cols=320 Identities=13% Similarity=0.144 Sum_probs=225.5
Q ss_pred CChhhHHHHHHHHHhcCC--CCCCCCCcccChHHHHHHHHHHHhhcCCC---cEEEecccHHHHHHHHHhhcCCCCEEEE
Q psy15447 95 ENPDIEKCAIDCIDKNGV--GSCGPRGFYGTNVVHLDLENDIASFMGLE---ETALYSFGFSTSASAIAAYVKRNDAVFV 169 (457)
Q Consensus 95 ~~p~i~~a~~~~l~~~~~--~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~ai~a~~~~gd~v~~ 169 (457)
.++.+.+++.+.+++++. +...++...+..+...++++.+++++|.+ .+++++++++++..++.+++++||.|++
T Consensus 12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~ 91 (376)
T TIGR01977 12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLKEGDHVIT 91 (376)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccCCCCEEEE
Confidence 346899999999887642 11112111123467789999999999964 3566678889999999998899999999
Q ss_pred eCcccHHHHHH----HHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHH
Q psy15447 170 DENINFAIQTG----LIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDIL 240 (457)
Q Consensus 170 ~~~~h~~~~~~----~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~ 240 (457)
....|.++... ....|.++..++. .|++++++.+. ++++++++++++|++|.+.|+++|.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~-----------~~~~~v~~~~~~n~tG~~~~~~~i~ 160 (376)
T TIGR01977 92 TPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIK-----------TNTKLIVVSHASNVTGTILPIEEIG 160 (376)
T ss_pred CcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcC-----------CCCeEEEEECCCCCccccCCHHHHH
Confidence 99888876543 2344777776653 36888888774 2457888889999999999999999
Q ss_pred HHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc-c-cEE-EecHHHHHHHHhhCC-----
Q psy15447 241 SLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV-G-GFC-VGSSYIIEHHRLSGS----- 312 (457)
Q Consensus 241 ~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~-g-G~v-~~~~~~~~~~~~~~~----- 312 (457)
++|++||+++|+|++|++|... +++...++|+++.|++|+++++ | |++ +.++..+..+.....
T Consensus 161 ~l~~~~~~~livD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~ 231 (376)
T TIGR01977 161 ELAQENGIFFILDAAQTAGVIP---------IDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGSHSA 231 (376)
T ss_pred HHHHHcCCEEEEEhhhccCccC---------CCchhcCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCccccc
Confidence 9999999999999999987642 2233346799999999998542 3 444 444432221111100
Q ss_pred ----------cceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC----CCCeE
Q psy15447 313 ----------GYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR----DTPLK 376 (457)
Q Consensus 313 ----------~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~----~~~~~ 376 (457)
.+. .++.+....++..++++.+.+. +.++++.+++.+++.+.|++ .+++.+..+. ..+++
T Consensus 232 ~~~~~~~~~~r~~-~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~---~~~~~~~~~~~~~~~~~~v 307 (376)
T TIGR01977 232 LIDQPSELPDRFE-SGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLRE---INKVKIYGPADPANRVGVV 307 (376)
T ss_pred cccccccchhhcc-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc---CCCeEEeCCCCccccCCeE
Confidence 011 1234555566666788877654 45678889999999999987 5777775431 35677
Q ss_pred EEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccc-----cCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 377 YLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQE-----AKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 377 ~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~-----~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
.+.+... ...++.+.|.++ ||.++.+.++... .....+.+|++++..+|++|+++++++|++
T Consensus 308 ~~~~~~~--------~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 308 SFTVEGI--------DSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred EEEECCC--------CHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 7776532 345788999988 9999876543210 011346899999999999999999999975
No 178
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.95 E-value=1e-24 Score=221.49 Aligned_cols=342 Identities=13% Similarity=0.115 Sum_probs=220.7
Q ss_pred hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHHHHHHHhhc-CCCCEEEEeC
Q psy15447 97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTSASAIAAYV-KRNDAVFVDE 171 (457)
Q Consensus 97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~~~ai~a~~-~~gd~v~~~~ 171 (457)
..+.+++.+.++..+.....+....|..++.+.+++.+.+..| .+++++++++++++..++.+++ ++||.|++..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~ 170 (481)
T PTZ00377 91 ADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPI 170 (481)
T ss_pred HHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECC
Confidence 3567777776665432222233334555555555555554333 3355666677789999999998 7999999999
Q ss_pred cccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHH
Q psy15447 172 NINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILS 241 (457)
Q Consensus 172 ~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~ 241 (457)
++|..+...++..|.+++.++. .|++++++.+.....+ ..+++++++.+++||||.+.+ +++|.+
T Consensus 171 P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~-----~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~ 245 (481)
T PTZ00377 171 PQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRN-----GITPRALVVINPGNPTGQVLTRDVMEEIIK 245 (481)
T ss_pred CCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhc-----CCCeeEEEEECCCCCCCcCCCHHHHHHHHH
Confidence 9999999999999988877653 2678998888643210 124566666688999999999 789999
Q ss_pred HHHHcCcEEEEEcCcccccccC-CC-Cccccc-cCCCCC----CccEEEecCcccc-cCc---ccEEEe---cHHHHHHH
Q psy15447 242 LRSKYQARIFVDESVSFGTLGS-TG-HGVTEY-FGVSTE----EVDMIIGSLEHAL-GSV---GGFCVG---SSYIIEHH 307 (457)
Q Consensus 242 l~~~~g~~li~DEa~~~g~~g~-~g-~~~~~~-~~~~~~----~~Di~~~s~sK~l-g~~---gG~v~~---~~~~~~~~ 307 (457)
+|++||+++|+||+|+...+.. .. ..+... .++.++ ...|+++||||++ +.+ .||+++ ++++++.+
T Consensus 246 ~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l 325 (481)
T PTZ00377 246 FCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQI 325 (481)
T ss_pred HHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHH
Confidence 9999999999999998655521 11 111110 112221 1237889999984 544 499885 88888888
Q ss_pred HhhCCcceecCCCcHHHHHHHHHHHHH-----------HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeE
Q psy15447 308 RLSGSGYCFSASLPPFLAVAANKALHL-----------LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLK 376 (457)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~-----------~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 376 (457)
..... ... +.++++..++.++++. .++....++.++++.+.+.+.|++ ++|+.+..+.++.++
T Consensus 326 ~~~~~-~~~--~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~---~~g~~~~~p~gg~fl 399 (481)
T PTZ00377 326 YKLAS-INL--CSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNK---IEGVSCQPVEGAMYA 399 (481)
T ss_pred HHHhh-eec--CCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCcEeecCCeeEEE
Confidence 65432 212 2355565666555531 111122334567888889999988 468887755556777
Q ss_pred EEEecCCcch-HHHH----HHHHHHH-HHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 377 YLYLQKSDDE-VASK----KLLQTIC-DMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 377 ~i~~~~~~~~-~~~~----~~~~~~~-~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
|+.+..+... .... .....++ ..|.++||.+.++..+.. ..+.+++|+++. .++++++++++.|+++++.
T Consensus 400 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~--~~~~~~~Rls~~--~~~e~l~~~l~rl~~~~~~ 475 (481)
T PTZ00377 400 FPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQ--KPGTYHFRITIL--PPEEQIEEMVKKIKEFHES 475 (481)
T ss_pred EeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCC--CCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHH
Confidence 7655422100 0000 0012344 445567999998875421 123468999997 6789999999999999887
Q ss_pred hcC
Q psy15447 451 AVQ 453 (457)
Q Consensus 451 ~~~ 453 (457)
..+
T Consensus 476 ~~~ 478 (481)
T PTZ00377 476 FMK 478 (481)
T ss_pred HHH
Confidence 644
No 179
>PRK07550 hypothetical protein; Provisional
Probab=99.95 E-value=7.8e-25 Score=217.03 Aligned_cols=336 Identities=13% Similarity=0.111 Sum_probs=227.9
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccHHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGFSTSA 154 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~~ 154 (457)
|+..+||.+++. .+...+.+.+++.+.+... . ...+....|..++...+++.+.+..|. +.+++++++++++.
T Consensus 28 ~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~-~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~ 104 (386)
T PRK07550 28 DGPLIDLSQAVP-GYPPPPELLRALAEAAADP-A-AHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFW 104 (386)
T ss_pred CCCeEEeCCCCC-CCCCCHHHHHHHHHHHhCc-C-CcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence 566899988764 3444677888888776431 1 111222345666666677776665552 34455555568999
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY 227 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~ 227 (457)
.++.+++++||.|+++.+.|......++..|.++..++.. |++++++.++. +++++++.+++
T Consensus 105 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~-----------~~~~v~~~~P~ 173 (386)
T PRK07550 105 AAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITP-----------RTRAIALVTPN 173 (386)
T ss_pred HHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcc-----------cCcEEEEeCCC
Confidence 9999999999999999999988887888889888777642 57778887753 23455566788
Q ss_pred CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCC-CCCCccEEEecCcccccCcc---cEEEec
Q psy15447 228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGV-STEEVDMIIGSLEHALGSVG---GFCVGS 300 (457)
Q Consensus 228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~-~~~~~Di~~~s~sK~lg~~g---G~v~~~ 300 (457)
||+|.+.+ +++|.++|++||+++|+||+|+....+. +.. ...+.. ......+++.||||.+|.+| ||++++
T Consensus 174 NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~-~~~-~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~ 251 (386)
T PRK07550 174 NPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGG-GAP-HDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVAS 251 (386)
T ss_pred CCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCC-CCC-cchhhCCCccccEEEEecchhhccCcccceEeeecC
Confidence 99999988 6799999999999999999987543321 111 011111 11222578999999997554 999999
Q ss_pred HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEE
Q psy15447 301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLY 379 (457)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~ 379 (457)
+++++.+......... +.+.+...++...++.+++. .+.++.++++.+.+.+.|++ ..++.+. +.++.++|+.
T Consensus 252 ~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~-~~g~~~~~~~ 325 (386)
T PRK07550 252 PARIAEIEKFMDTVAI--CAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFAR---LPGWELL-ASGAYFAYVR 325 (386)
T ss_pred HHHHHHHHHHHhhccc--CCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHh---CCCceeC-CCceEEEEec
Confidence 9888877654332222 23555555555555433222 24567788888999999987 3455543 4456777887
Q ss_pred ecC-CcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 380 LQK-SDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 380 ~~~-~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
+.. .. ...++++.|. ++||.+.++..+. ....+++||+++. .++++++++++.|.++
T Consensus 326 ~~~~~~-------~~~~l~~~l~~~~gv~v~pg~~f~---~~~~~~iRis~~~-~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 326 HPFPDR-------PSREVARRLAKEAGILCLPGTMFG---PGQEGYLRLAFAN-ADVAGIGELVERLRAF 384 (386)
T ss_pred CCCCCC-------CHHHHHHHHHHhcCEEEeCchhhC---CCCCCEEEEEeec-CCHHHHHHHHHHHHhh
Confidence 764 33 4567888875 5799999876532 1235789999964 5799999999998764
No 180
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.95 E-value=9.1e-25 Score=218.47 Aligned_cols=346 Identities=12% Similarity=0.068 Sum_probs=228.9
Q ss_pred CeeeEEeecCCcc---CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHH
Q psy15447 79 GIPCINFATHNYL---SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFS 151 (457)
Q Consensus 79 G~~~id~~s~~~l---~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~ 151 (457)
|+++|++..+++- .+...+++.+++.+.++.-... ++....|..+..+.+++.+.+..| .+++++++++++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~--~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~ 128 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYN--SYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQ 128 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCC--CCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHH
Confidence 7899999887553 3445678999999888752111 111122344444444444433222 245677777889
Q ss_pred HHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEe
Q psy15447 152 TSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVE 224 (457)
Q Consensus 152 a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e 224 (457)
|+..++.++.++||.|++..++|..+.......|.++..++. .|++++++.+.. +++++++.
T Consensus 129 al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----------~~~~i~i~ 197 (430)
T PLN00145 129 AIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADE-----------NTVAMVII 197 (430)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCc-----------CceEEEEe
Confidence 999999999999999999999998877778888888877653 267888776643 45677777
Q ss_pred cCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEE
Q psy15447 225 GVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCV 298 (457)
Q Consensus 225 ~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~ 298 (457)
+++||+|.+.+ +++|.++|++||+++|+||+|....++.. .+.....+......|+++||||.++.+| ||++
T Consensus 198 ~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~--~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv 275 (430)
T PLN00145 198 NPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSK--PFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIA 275 (430)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCC--CccchhhhcccCcEEEEeccccccCCCCeeEEEEE
Confidence 78999999998 78889999999999999999976555321 1111111111223599999999987766 9988
Q ss_pred e--cHHHHH------HHHhhCCcceecCCCcHHHHHHHHHHHHHH--hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEe
Q psy15447 299 G--SSYIIE------HHRLSGSGYCFSASLPPFLAVAANKALHLL--KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQ 368 (457)
Q Consensus 299 ~--~~~~~~------~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~--~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~ 368 (457)
+ ++.+++ .+.... ..+...+.+..+++...|+.- ....+.++.++++.+.+.+.|++ ++++.+.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~---~~g~~~~ 349 (430)
T PLN00145 276 TCDPNGILKETKVVDSIRNYL---NISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKE---IKCITCP 349 (430)
T ss_pred EecchhhhhhhHHHHHHHHHh---cccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc---CCCCCCC
Confidence 6 343332 232221 112223555556665555421 11134667888888899999987 4576543
Q ss_pred -ccCCCCeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 369 -GHRDTPLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 369 -~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
.+.+++++++.++...-.. .....+++.+|+ ++||.+.++..+ ...+++||++. .+++++++.++.|.+
T Consensus 350 ~~P~ga~y~~v~l~~~~~~~--~~~~~~~~~~ll~~~gV~v~pG~~f-----g~~~~lRis~~--~~~~~l~~al~rl~~ 420 (430)
T PLN00145 350 HKPEGSMFVMVKLDLSCLSG--IKDDMDFCCKLAKEESVVVLPGSAL-----GMKNWLRITFA--IDPPSLEDGLERLKS 420 (430)
T ss_pred cCCCeeeEEEeccChhhcCC--CCCHHHHHHHHHHhCCEEEeCcccc-----CCCCeEEEEeC--CCHHHHHHHHHHHHH
Confidence 3566778888775310000 002345666555 569999987653 33689999997 378999999999999
Q ss_pred HHHHhcCC
Q psy15447 447 SHDIAVQP 454 (457)
Q Consensus 447 ~~~~~~~~ 454 (457)
++......
T Consensus 421 ~~~~~~~~ 428 (430)
T PLN00145 421 FCLRHAKL 428 (430)
T ss_pred HHHHhccc
Confidence 98776544
No 181
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.95 E-value=3.3e-25 Score=217.92 Aligned_cols=325 Identities=12% Similarity=0.064 Sum_probs=216.9
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEec-ccHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYS-FGFST 152 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~-sG~~a 152 (457)
++..++||..+++. ....+.+.+++.+..... .+....|..++...+++.+.+..|. ++.++++ +++++
T Consensus 25 ~~~~~i~l~~~~p~-~~~~~~~~~~~~~~~~~~-----~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~ 98 (364)
T PRK07865 25 HPDGIVDLSVGTPV-DPVPPVIQEALAAAADAP-----GYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKEL 98 (364)
T ss_pred cCCCEEEcCCCCCC-CCCCHHHHHHHHHHHhhC-----CCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHH
Confidence 34568899887653 233577888877654321 1222345556666677766665442 2334455 55577
Q ss_pred HHHHHHhh-cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447 153 SASAIAAY-VKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA 231 (457)
Q Consensus 153 ~~~ai~a~-~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G 231 (457)
+..+..++ +++||.|+++.++|..+...+...|.++..++ ++++++. .+++++++++++||+|
T Consensus 99 i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~--~~~~l~~--------------~~~~~v~~~~p~NPtG 162 (364)
T PRK07865 99 VAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRAD--SLTELGP--------------QRPALIWLNSPSNPTG 162 (364)
T ss_pred HHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecC--ChhhCCc--------------ccceEEEEcCCCCCCC
Confidence 77776777 79999999999999999888898999887764 3333221 2446777778999999
Q ss_pred CCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccc--cCCCCCCccEEEecCcccccCcc---cEEEecHHH
Q psy15447 232 DICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEY--FGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYI 303 (457)
Q Consensus 232 ~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~--~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~ 303 (457)
.+.+ +++|.++|++||+++|+||+|+...+.......... .+.. .+..|+++||||.+|.+| ||+++++++
T Consensus 163 ~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~ 241 (364)
T PRK07865 163 RVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGD-HTGLLAVHSLSKQSNLAGYRAGFVAGDPAL 241 (364)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCc-cceEEEEeechhccCCCceeeEEEecCHHH
Confidence 9988 578889999999999999999754332111111110 0111 123599999999997655 999999999
Q ss_pred HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCC
Q psy15447 304 IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKS 383 (457)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~ 383 (457)
++.++.......+ +.+++..+++.+.++..+..++.++.++++.+.+.+.|++ .|+.+..+..+.++|+.+..
T Consensus 242 ~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~- 314 (364)
T PRK07865 242 VAELLEVRKHAGM--MVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEA----AGFRVDHSEAGLYLWATRGE- 314 (364)
T ss_pred HHHHHHHHHhcCC--CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH----cCCcccCCCccEEEEEeCCC-
Confidence 8887654322222 2355555655555543222234567778888899999988 47666544445566666532
Q ss_pred cchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447 384 DDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLC 445 (457)
Q Consensus 384 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 445 (457)
...++.+.|.++||.+.++.++. ...++++||+++. ++++++++++.|+
T Consensus 315 --------~~~~~~~~l~~~gv~v~pg~~f~---~~~~~~iRi~~~~--~~~~~~~~~~~l~ 363 (364)
T PRK07865 315 --------DCWDTVAWLAERGILVAPGDFYG---PAGAQHVRVALTA--TDERIAAAVERLA 363 (364)
T ss_pred --------CHHHHHHHHHHCCEEEeCccccC---cCCCCEEEEEecC--CHHHHHHHHHHhh
Confidence 23467788899999998876432 1235799999975 6899999998874
No 182
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.95 E-value=4.3e-25 Score=216.36 Aligned_cols=324 Identities=12% Similarity=0.067 Sum_probs=217.6
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-----CcEEEecccHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-----EETALYSFGFST 152 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-----~~~i~~~sG~~a 152 (457)
++.+++|+.++++. ....+.+.+++.+..... .+....|..+++.++++.+.+..|. ++++++++++++
T Consensus 19 ~~~~~i~l~~~~p~-~~~~~~~~~~~~~~~~~~-----~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~ 92 (357)
T TIGR03539 19 HPDGIVDLSVGTPV-DPVPPLIRAALAAAADAP-----GYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKEL 92 (357)
T ss_pred CCCCeEEccCCCCC-CCCCHHHHHHHHHHHhhC-----CCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHH
Confidence 35678999987642 333577888877655432 1222345666677777777665453 344555555688
Q ss_pred HHHHHHhh-cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447 153 SASAIAAY-VKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA 231 (457)
Q Consensus 153 ~~~ai~a~-~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G 231 (457)
+..++.++ +++||.|+++.++|..+...+...|.++..++ +++.++ . .++++|++++++||+|
T Consensus 93 i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--~~~~l~----~----------~~~~~v~~~~p~NPtG 156 (357)
T TIGR03539 93 VAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD--DPTELD----P----------VGPDLIWLNSPGNPTG 156 (357)
T ss_pred HHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC--ChhhcC----c----------cCccEEEEeCCCCCcC
Confidence 88777777 79999999999999998888888898887763 433322 1 3457888889999999
Q ss_pred CCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccc--cCCCCCCccEEEecCcccccCcc---cEEEecHHH
Q psy15447 232 DICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEY--FGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYI 303 (457)
Q Consensus 232 ~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~--~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~ 303 (457)
.+.+ +++|.++|++||+++|+||+|....++......... .+...+. .|+++||||.+|.+| ||+++++++
T Consensus 157 ~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~-vi~~~S~SK~~~~~G~R~G~~i~~~~~ 235 (357)
T TIGR03539 157 RVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTG-LLAVHSLSKRSNLAGYRAGFVAGDPAL 235 (357)
T ss_pred ccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCcccc-EEEEeccccccCCCceeEEEEecCHHH
Confidence 9987 668899999999999999998643332211111110 1111122 488999999986554 999999998
Q ss_pred HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCC
Q psy15447 304 IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKS 383 (457)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~ 383 (457)
++.++...... +.+.+.+...++.++++........++.++++.+++.+.|++ .|+.+..+..+.++++.++.
T Consensus 236 ~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~----~g~~~~~p~~~~~~~~~~~~- 308 (357)
T TIGR03539 236 VAELLTVRKHA--GLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEK----AGFRIDHSEAGLYLWATRGE- 308 (357)
T ss_pred HHHHHHHHhhc--ccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH----cCCCCcCCCccEEEEEECCC-
Confidence 88876443221 123355555666666532222234567778888899999988 46665544445566666543
Q ss_pred cchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447 384 DDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL 444 (457)
Q Consensus 384 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l 444 (457)
...++.+.|.++||.+.++.++. ...++++||+++. ++++++++++.|
T Consensus 309 --------~~~~~~~~l~~~gV~v~pg~~f~---~~~~~~iRis~~~--~~~~i~~~~~~l 356 (357)
T TIGR03539 309 --------DAWDTVDRLAELGILVAPGDFYG---PAGSQHVRVALTA--TDERIAAAVARL 356 (357)
T ss_pred --------CHHHHHHHHHhCCEEECCccccC---CCCCCeEEEEecC--CHHHHHHHHHhh
Confidence 23468888989999999876532 2235799999975 689999988765
No 183
>PRK07683 aminotransferase A; Validated
Probab=99.95 E-value=1e-24 Score=215.93 Aligned_cols=336 Identities=13% Similarity=0.093 Sum_probs=226.7
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CC-cEEEecccHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LE-ETALYSFGFSTSA 154 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~-~~i~~~sG~~a~~ 154 (457)
..++||..+.+ .+..++.+.+++.+.+......+ ....|..++..++++.+.+..| .+ ..++++++++|+.
T Consensus 28 ~~~i~l~~~~p-~~~~~~~~~~a~~~~~~~~~~~Y---~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~ 103 (387)
T PRK07683 28 DNLISLTIGQP-DFPTPSHVKEAAKRAITENYTSY---THNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAID 103 (387)
T ss_pred CCeEEecCCCC-CCCCCHHHHHHHHHHHhcCCCCC---CCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHH
Confidence 46788887654 34446788899998887532211 1112344444444444433324 23 4566667789999
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM 228 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~ 228 (457)
.++.+++++||.|+++.+.|..+...+...|.++..++.+ |.+++++.+.. +++++++.+++|
T Consensus 104 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~-----------~~~~i~i~~p~N 172 (387)
T PRK07683 104 IAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITE-----------KTRCVVLPYPSN 172 (387)
T ss_pred HHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCc-----------CceEEEEeCCCC
Confidence 9999999999999999999888888888889998887643 45667666532 346778889999
Q ss_pred CCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHH
Q psy15447 229 NSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSY 302 (457)
Q Consensus 229 ~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~ 302 (457)
|+|.+.+ +++|.++|+++|+++|+||+|+...++.....+....+. ++ .+|+++||||.+|.+| ||++++++
T Consensus 173 PtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~-~vi~~~s~SK~~~~pGlRiG~i~~~~~ 250 (387)
T PRK07683 173 PTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEM-RE-KTIVINGLSKSHSMTGWRIGFLFAPSY 250 (387)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCC-cC-CeEEEeeccccccCccceeEEEEcCHH
Confidence 9999987 778899999999999999999865554322222222122 22 2588999999998777 99999999
Q ss_pred HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEec
Q psy15447 303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ 381 (457)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~ 381 (457)
+++.+.... .+.+. ..+.+...++.+.++.-.. .+..+++++++.+.+.+.|++ .++.+..+..+.++++.+.
T Consensus 251 l~~~~~~~~-~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~ 324 (387)
T PRK07683 251 LAKHILKVH-QYNVT-CASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLIS----MGLDVEKPTGAFYLFPSIG 324 (387)
T ss_pred HHHHHHHHH-HhccC-CCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH----cCCcccCCCeeEEEEEecc
Confidence 888876542 23222 2344555555555532111 124566778888899999987 4666553444555665554
Q ss_pred C-CcchHHHHHHHHHHHHH-HHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 382 K-SDDEVASKKLLQTICDM-CIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 382 ~-~~~~~~~~~~~~~~~~~-l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
. .. ...++++. +.++||.+.++..+. ....+++||++.. ++++++++++.|.+++.+
T Consensus 325 ~~~~-------~~~~~~~~ll~~~gI~v~pg~~f~---~~~~~~~Ri~~~~--~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 325 HFTM-------SSFDFALDLVEEAGLAVVPGSAFS---EYGEGYVRLSYAY--SIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred cCCC-------CHHHHHHHHHHhCCEEEcCchhhC---CCCCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 3 22 23456655 456799998876432 1235799999974 789999999999887754
No 184
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.95 E-value=5.9e-25 Score=217.14 Aligned_cols=325 Identities=15% Similarity=0.159 Sum_probs=228.1
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASA 156 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~a 156 (457)
|+.+++++.+ ++|.+.+++.+.+++. .+. +..+.+..+...++++.+++++|.+ ..+++++|++++..+
T Consensus 22 ~~~~~~~~~~------~~~~~~~a~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~ 92 (373)
T TIGR03812 22 GRILGSMCTN------PHPIAVKAYDMFIETN-LGD--PGLFPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQA 92 (373)
T ss_pred CcEEEEEeCC------chHHHHHHHHHHhhcC-CCC--cccCccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHH
Confidence 4556666653 4677888887776653 121 2223456677899999999999975 457888889998888
Q ss_pred HHhhc------CCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEec
Q psy15447 157 IAAYV------KRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEG 225 (457)
Q Consensus 157 i~a~~------~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~ 225 (457)
+.++. ++||.|+++.+.|.++...++..|.++..++.+ |++++++.+.+ .+..++++.
T Consensus 93 ~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~~----------~~~~vv~~~- 161 (373)
T TIGR03812 93 VRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLIDD----------NTIGIVGIA- 161 (373)
T ss_pred HHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHhh----------CcEEEEEEC-
Confidence 76654 467899999999999888888889988887753 78888888754 223455555
Q ss_pred CCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccc-cccCCCCCCccEEEecCcccc-cC--cccEEEecH
Q psy15447 226 VYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVT-EYFGVSTEEVDMIIGSLEHAL-GS--VGGFCVGSS 301 (457)
Q Consensus 226 v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~-~~~~~~~~~~Di~~~s~sK~l-g~--~gG~v~~~~ 301 (457)
+.+++|.+.|+++|.++|++||+++|+|++|+.+..+-...+.. ....+....+|.+..|.+|+. ++ .||+++.++
T Consensus 162 ~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~ 241 (373)
T TIGR03812 162 GTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSK 241 (373)
T ss_pred CCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCH
Confidence 46789999999999999999999999999998654321000000 011111125578778899953 22 345667788
Q ss_pred HHHHHHHhhCCcceec-------CCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC
Q psy15447 302 YIIEHHRLSGSGYCFS-------ASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD 372 (457)
Q Consensus 302 ~~~~~~~~~~~~~~~~-------~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~ 372 (457)
++++.++.. .++.+. ++.++..++++.++++.+.+. ++..+++.++++++++.|++ .++....++.
T Consensus 242 ~~~~~l~~~-~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~ 316 (373)
T TIGR03812 242 SYLKYLSVD-APYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKK----IGFEPVIEPV 316 (373)
T ss_pred HHHhhhccc-CcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh----CCCeEEcCCC
Confidence 887766422 233222 234556667777888876543 35678999999999999998 3554332345
Q ss_pred CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 373 TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 373 ~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
.+++.+.+++ ..++.+.|.++||.++.... +.++|++++..+|++|+++++++|++
T Consensus 317 ~~~v~~~~~~----------~~~v~~~L~~~gi~v~~~~~--------~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 317 LNIVAFEVDD----------PEEVRKKLRDRGWYVSVTRC--------PKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred ceEEEEEeCC----------HHHHHHHHHHCCceeccCCC--------CCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 6666665542 23688999999999876432 46899999999999999999999975
No 185
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.95 E-value=2.9e-25 Score=223.08 Aligned_cols=327 Identities=17% Similarity=0.150 Sum_probs=224.3
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CC-cEEEecccHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LE-ETALYSFGFSTSA 154 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~-~~i~~~sG~~a~~ 154 (457)
...+||+++++ .....|.+.+++.+.+.... .|+......+|++.++++++ .+ ++++++++.+++.
T Consensus 85 ~~~i~L~~g~p-~~~~~p~~~~~~~~~~~~~~--------~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~ 155 (431)
T PRK15481 85 TPLHDLAGGNP-DPQRLPDLSRYFARLSRTPR--------LYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIE 155 (431)
T ss_pred chhhhhhcCCC-ChhHhHHHHHHHHHhhhhhh--------hcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHH
Confidence 34567766543 22223556666665543211 12222223456666666654 33 4555666668999
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS 230 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~ 230 (457)
.++.+++++||.|+++.++|..+...++..|.++..++.+ |+++++++++. ..+.++++.+++|||
T Consensus 156 ~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g~~~~~l~~~~~~----------~~k~i~~~p~p~NPT 225 (431)
T PRK15481 156 RLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEGMQPEKLERALAQ----------GARAVILTPRAHNPT 225 (431)
T ss_pred HHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCCCCCHHHHHHHHhc----------CCCEEEECCCCCCCC
Confidence 9999999999999999999999999999999998887643 67888887753 223344445899999
Q ss_pred CCCCChH---HHHHHHHHc-CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHH
Q psy15447 231 ADICPLK---DILSLRSKY-QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYI 303 (457)
Q Consensus 231 G~i~~l~---~i~~l~~~~-g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~ 303 (457)
|.+.+.+ +|.++|++| ++++|+||+|+....... ... .....+ ..|+++||||.+| +| ||+++++++
T Consensus 226 G~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~-~~~---~~~~~~-~vi~~~SfSK~~~-~GlRiG~~i~~~~~ 299 (431)
T PRK15481 226 GCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPY-HSV---IPQTTQ-RWALIRSVSKALG-PDLRLAFVASDSAT 299 (431)
T ss_pred CccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCC-CCC---CcCCCC-CEEEEeeeccccC-CCceeEEEeCCHHH
Confidence 9999964 999999999 999999999875432210 111 111112 3589999999998 55 999999998
Q ss_pred HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh---hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447 304 IEHHRLSGSGYCFSASLPPFLAVAANKALHLLK---ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL 380 (457)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~---~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~ 380 (457)
++.+........+ +.+.+...++.++|+.-. ...+.++.++++.+.+.+.|++ .++.+..+.++.++|+.+
T Consensus 300 ~~~~~~~~~~~~~--~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~----~~~~~~~p~gg~f~~~~l 373 (431)
T PRK15481 300 SARLRLRLNSGTQ--WVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQ----YGIAIPSPGDGLNLWLPL 373 (431)
T ss_pred HHHHHHHHhcccc--CCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHH----cCCccccCCCeEEEEEEC
Confidence 8888643322222 246666666666664211 1124677888889999999988 466654466788888887
Q ss_pred cCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 381 QKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
+.+ ..++++.|.++||.+.++..+.. ....+++||+++. .++++++++++.|++++.
T Consensus 374 ~~~---------~~~~~~~l~~~gV~v~pg~~f~~--~~~~~~iRis~~~-~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 374 DTD---------SQATALTLAKSGWLVREGEAFGV--SAPSHGLRITLST-LNDAEINRLAADLHQALN 430 (431)
T ss_pred CCC---------HHHHHHHHHHCCcEEecCCcccc--CCCCCeEEEEcCC-CChHHHHHHHHHHHHHhc
Confidence 642 24688888899999998764321 1224689999975 579999999999988764
No 186
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.95 E-value=1.4e-24 Score=216.71 Aligned_cols=345 Identities=12% Similarity=0.083 Sum_probs=229.9
Q ss_pred CCeeeEEeecCCcc---CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----------CCCcEE
Q psy15447 78 NGIPCINFATHNYL---SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----------GLEETA 144 (457)
Q Consensus 78 ~G~~~id~~s~~~l---~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----------g~~~~i 144 (457)
+|+.++||..+++- .+...+.+.+++.+.++.... ..+....|..++.+.+++.+.+.+ ..+.++
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~--~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~ 108 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQEC--NGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVV 108 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCC--CCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEE
Confidence 67889999987652 134567889998887765111 112222344444444444444321 123556
Q ss_pred EecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCc
Q psy15447 145 LYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVT 217 (457)
Q Consensus 145 ~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~ 217 (457)
+++++++++..++.+++++||.|++..++|..+...++..|.++..++. .|++++++.+.. +
T Consensus 109 it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~-----------~ 177 (412)
T PTZ00433 109 LCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDD-----------R 177 (412)
T ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhcc-----------C
Confidence 6667779999999999999999999999999988888999988877653 256777766642 3
Q ss_pred cEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc
Q psy15447 218 KKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG 294 (457)
Q Consensus 218 ~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g 294 (457)
+++|++.+++||+|.+.+ +++|.++|++||+++|+||+|....++. ..........+....|+++||||.+|.+|
T Consensus 178 ~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~~~pG 255 (412)
T PTZ00433 178 TKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNG--ATFTSVADFDTTVPRVILGGTAKNLVVPG 255 (412)
T ss_pred ceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCC--CCccchhhccCCCceEEEccchhhcCCCC
Confidence 467778889999999887 6788999999999999999997544432 11111111221212488999999997666
Q ss_pred ---cEEEe------cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH--HhhCcHHHHHHHHHHHHHHHHhhcccccC
Q psy15447 295 ---GFCVG------SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHL--LKANPSLLTKLREKCNTMHSLLSQHKVTQ 363 (457)
Q Consensus 295 ---G~v~~------~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~--~~~~~~~~~~l~~~~~~l~~~L~~~~~~~ 363 (457)
||+++ .+++++.+..... ..+ +.+++..+++.+.+.. -....+.+++++++.+.+.+.|++ ..
T Consensus 256 lRlG~~i~~~p~~~~~~~~~~~~~~~~-~~~--~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~---~~ 329 (412)
T PTZ00433 256 WRLGWLLLVDPHGNGGDFLDGMKRLGM-LVC--GPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGE---CI 329 (412)
T ss_pred eeEEEEEEeCCcccHHHHHHHHHHHhh-ccC--CCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhc---CC
Confidence 99886 2456666654321 112 3466666666555532 111134567788888889898887 34
Q ss_pred CeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHH
Q psy15447 364 RFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIE 442 (457)
Q Consensus 364 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~ 442 (457)
++.+..+.++.++|+.++...-. ......++++.|++ +||.+.++..+ ...+++|+++.. .++++++.++
T Consensus 330 ~~~~~~p~gg~f~~~~l~~~~~~--~~~~~~~~~~~ll~~~gV~v~pg~~f-----~~~~~iRis~~~--~~e~l~~al~ 400 (412)
T PTZ00433 330 GLSPTMPRGSMFLMSRLDLEKFR--DIKSDVEFYEKLLEEENVQVLPGEIF-----HMPGFTRLTISR--PVEVLREAVE 400 (412)
T ss_pred CCcccCCCeeEEEEEEechhhcC--CCCCHHHHHHHHHHhcCEEEeCcccc-----CCCCeEEEEecC--CHHHHHHHHH
Confidence 66655455677888887531000 00023578888875 79999987643 235799999974 5889999999
Q ss_pred HHHHHHHHhc
Q psy15447 443 TLCKSHDIAV 452 (457)
Q Consensus 443 ~l~~~~~~~~ 452 (457)
.|.++++...
T Consensus 401 ~l~~~~~~~~ 410 (412)
T PTZ00433 401 RIKAFCERHK 410 (412)
T ss_pred HHHHHHHHhc
Confidence 9999887543
No 187
>PRK03321 putative aminotransferase; Provisional
Probab=99.95 E-value=4.3e-25 Score=216.23 Aligned_cols=316 Identities=12% Similarity=0.128 Sum_probs=222.6
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC-cEEEecccH-HHHHHHHH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE-ETALYSFGF-STSASAIA 158 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG~-~a~~~ai~ 158 (457)
.++||..+.. .++..+.+.+++.+.+..+.. + + .....++++.+|++++.+ ..+++++|+ +++..++.
T Consensus 23 ~~i~l~~~~~-~~~~~~~~~~a~~~~~~~~~~----y----~-~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~ 92 (352)
T PRK03321 23 GAIKLSSNET-PFGPLPSVRAAIARAAAGVNR----Y----P-DMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQ 92 (352)
T ss_pred cceeccCCCC-CCCCCHHHHHHHHHHHHhcCc----C----C-CCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHH
Confidence 4788887643 344467899998887754321 1 1 123578999999999865 345556665 56677778
Q ss_pred hhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC
Q psy15447 159 AYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI 233 (457)
Q Consensus 159 a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i 233 (457)
+++++||.|+++.+.+..+....+..|.++..++.+ |++++++.++. +++++++++++||+|.+
T Consensus 93 ~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~-----------~~~~v~l~~p~NPtG~~ 161 (352)
T PRK03321 93 ATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAITD-----------RTRLIFVCNPNNPTGTV 161 (352)
T ss_pred HhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhcc-----------CCCEEEEeCCCCCcCCC
Confidence 888999999999888877766778888888877654 57777776642 34677777899999999
Q ss_pred CChHHHHHHHHH--cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHH
Q psy15447 234 CPLKDILSLRSK--YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHR 308 (457)
Q Consensus 234 ~~l~~i~~l~~~--~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~ 308 (457)
.|.+++.++|++ +++++|+||+|....++........... ..+..++++||||.+|.+| ||+++++++++.+.
T Consensus 162 ~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~--~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~ 239 (352)
T PRK03321 162 VTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVR--DHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALR 239 (352)
T ss_pred cCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHh--hCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHH
Confidence 999999999987 5999999999975444321111111111 1122488999999998666 99999999999887
Q ss_pred hhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHH
Q psy15447 309 LSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVA 388 (457)
Q Consensus 309 ~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 388 (457)
..... .+.+++..+++.+++...+...+..+++.++.+++.+.|++ .++.+. ++.++++++.++.
T Consensus 240 ~~~~~----~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~----~~~~~~-~~~g~~i~i~l~~------ 304 (352)
T PRK03321 240 KVAVP----FSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRA----AGWTVP-PSQANFVWLPLGE------ 304 (352)
T ss_pred HhcCC----CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCCccC-CCCCCEEEEeCCC------
Confidence 54322 23466776666666643322233444555566778888887 465543 4467888887743
Q ss_pred HHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 389 SKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 389 ~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
...++++.|.++||.+.+.. .+.+||+++ +.+++++++++|++++.
T Consensus 305 ---~~~~~~~~l~~~gI~v~~~~---------~~~iRi~~~---~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 305 ---RTADFAAAAAEAGVVVRPFA---------GEGVRVTIG---APEENDAFLRAARAWRA 350 (352)
T ss_pred ---CHHHHHHHHHHCCEEEEccC---------CCcEEEeeC---CHHHHHHHHHHHHHHhc
Confidence 23578899999999998632 356999984 89999999999998754
No 188
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.2e-24 Score=216.58 Aligned_cols=344 Identities=12% Similarity=0.126 Sum_probs=230.6
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC----cEEEecccHHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE----ETALYSFGFSTSA 154 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~ 154 (457)
|.+++|+..+.+ .+..++.+.+++.+.+.+... .+....|..++.+++++.+++.+|.+ ++++++++++|+.
T Consensus 32 ~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~~~---~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 107 (402)
T PRK06107 32 GRSIVDLTVGEP-DFDTPDHIKQAAVAAIERGET---KYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIF 107 (402)
T ss_pred cCCEEEcCCCCC-CCCCCHHHHHHHHHHHHcCCC---CCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHH
Confidence 456788887654 344468899999888865221 23333567788888888888877752 3455555678999
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY 227 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~ 227 (457)
.++.+++++||.|+++.++|..+...+...+..+..++. .|++++++.+. ++++++++.+++
T Consensus 108 ~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-----------~~~~~v~l~~p~ 176 (402)
T PRK06107 108 LALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAIT-----------PRTRWLILNAPS 176 (402)
T ss_pred HHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcC-----------cCceEEEEECCC
Confidence 999889999999999999877776666777766655543 24567776653 244677777889
Q ss_pred CCCCCCCC---hHHHHHHHHHc-CcEEEEEcCcccccccCCCCccccccCCCCC--CccEEEecCcccccCcc---cEEE
Q psy15447 228 MNSADICP---LKDILSLRSKY-QARIFVDESVSFGTLGSTGHGVTEYFGVSTE--EVDMIIGSLEHALGSVG---GFCV 298 (457)
Q Consensus 228 ~~~G~i~~---l~~i~~l~~~~-g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~--~~Di~~~s~sK~lg~~g---G~v~ 298 (457)
||+|.+.+ +++|+++|++| |+++|+||+|+...+.... ......+.++ +..|+++||||.+|.+| ||++
T Consensus 177 NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~--~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~ 254 (402)
T PRK06107 177 NPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEP--TPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAA 254 (402)
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCC--CCCHHHhCcCccCCEEEEeccchhhcCcccceeeee
Confidence 99999988 56778889998 9999999999754442211 1111111111 23588999999998665 9999
Q ss_pred ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh-hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEE
Q psy15447 299 GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKY 377 (457)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 377 (457)
+++++++.+....... +.+.+.+..+++...|+.-. ..++.++.++++.+.+.+.|++ ..|+.+..+..+.++|
T Consensus 255 ~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~---~~g~~~~~p~gg~~~~ 329 (402)
T PRK06107 255 GPADLIAAINKLQSQS--SSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNA---IPGLSCLVPDGAFYLY 329 (402)
T ss_pred cCHHHHHHHHHHHHhc--ccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhc---CCCCcccCCCcceEEe
Confidence 9999998886543222 22345566666655553101 1124566788888889898887 4577665555677777
Q ss_pred EEecCCcc--hHHHH--HHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 378 LYLQKSDD--EVASK--KLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 378 i~~~~~~~--~~~~~--~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+.+..-.+ ..... ....+++.++. ++||.+.++..+ ...+++|+++.. ++++++++++.|.++++.+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~F-----g~~~~iRis~~~--~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 330 VNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAY-----GLSPYFRLSIAT--SLETLEEACARIERAVAAL 401 (402)
T ss_pred eecccccccccccccCCCCHHHHHHHHHHhCCEEEeCcccc-----CCCCeEEEEeCC--CHHHHHHHHHHHHHHHHhc
Confidence 76631000 00000 02245665554 679999988653 235799999984 7999999999999988664
No 189
>PRK08363 alanine aminotransferase; Validated
Probab=99.95 E-value=1.4e-24 Score=216.08 Aligned_cols=340 Identities=11% Similarity=0.068 Sum_probs=223.7
Q ss_pred CCeeeEEeecCCcc--CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----C----CCcEEEec
Q psy15447 78 NGIPCINFATHNYL--SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----G----LEETALYS 147 (457)
Q Consensus 78 ~G~~~id~~s~~~l--~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g----~~~~i~~~ 147 (457)
+|+.++|++.+.+. .+..++.+.+++.+.+...... |+...-..+|++.+++++ | .+++++++
T Consensus 28 ~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~~-------Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~ 100 (398)
T PRK08363 28 KGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNY-------YGPSEGLPELREAIVKREKRKNGVDITPDDVRVTA 100 (398)
T ss_pred cCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCCC-------CCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeC
Confidence 36789999987763 5666788999998887642111 111222355666666654 3 23456666
Q ss_pred ccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEec-C------CCHHHHHHHHHhhchhcccCCCCccEE
Q psy15447 148 FGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFK-H------NNMQHLEELLRQQDERDTLNSKVTKKF 220 (457)
Q Consensus 148 sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~-~------~d~~~le~~l~~~~~~~~~~~~~~~~~ 220 (457)
++++|+..++.+++++||.|++..++|..+...+...|..+..++ . .|++++++.+. +++++
T Consensus 101 G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-----------~~~~~ 169 (398)
T PRK08363 101 AVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKIT-----------EKTKA 169 (398)
T ss_pred CHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCC-----------cceEE
Confidence 777899999999999999999999999998888888887766652 1 25666666553 23467
Q ss_pred EEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---
Q psy15447 221 IIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG--- 294 (457)
Q Consensus 221 vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g--- 294 (457)
+++.+++||+|.+.+ +++|.++|++||+++|+||+|+...+........ .+......++++||||.++.+|
T Consensus 170 v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~---~~~~~~~vi~~~SfSK~~~~~GlRi 246 (398)
T PRK08363 170 IAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPG---SLTKDVPVIVMNGLSKVYFATGWRL 246 (398)
T ss_pred EEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHH---HcCcCCcEEEEecchhccCCccceE
Confidence 777789999999988 8899999999999999999987544422111111 1212222488899999987666
Q ss_pred cEEEe--cHHHHHHHHhhCCcc-eecCCCcHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc
Q psy15447 295 GFCVG--SSYIIEHHRLSGSGY-CFSASLPPFLAVAANKALHLL-KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH 370 (457)
Q Consensus 295 G~v~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~aaa~a~l~~~-~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~ 370 (457)
||+++ ++++++.+....... ....+.+.+...++.+++... +...+.+++++++.+++.+.|++ .+++.+..+
T Consensus 247 G~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~---~~~~~~~~p 323 (398)
T PRK08363 247 GYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNE---IPGISTTKP 323 (398)
T ss_pred EEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhc---CCCCEecCC
Confidence 99886 666666554321110 011123455545554554311 11124567788888999999987 456666544
Q ss_pred CCCCeEEEEecCCcchHHHHHHHHHHH-HHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 371 RDTPLKYLYLQKSDDEVASKKLLQTIC-DMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 371 ~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
..+.+.|+.+...... ...+++ +.|.++||.+.++..+. ...++++|+++. .++++++++++.|+++++
T Consensus 324 ~g~~~~~~~l~~~~~~-----~~~~~~~~~l~~~gV~v~~g~~f~---~~~~~~iRis~~--~~~~~l~~~l~~l~~~~~ 393 (398)
T PRK08363 324 QGAFYIFPRIEEGPWK-----DDKEFVLDVLHEAHVLFVHGSGFG---EYGAGHFRLVFL--PPVEILEEAMDRFEEFMR 393 (398)
T ss_pred CeEEEEEEEeccCCCC-----CHHHHHHHHHHhCCEEEeCchhhC---CCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 4555566566541000 122444 45578899998876432 123579999985 578999999999998876
Q ss_pred Hh
Q psy15447 450 IA 451 (457)
Q Consensus 450 ~~ 451 (457)
..
T Consensus 394 ~~ 395 (398)
T PRK08363 394 ER 395 (398)
T ss_pred Hh
Confidence 53
No 190
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=4.3e-25 Score=216.52 Aligned_cols=320 Identities=11% Similarity=0.093 Sum_probs=228.2
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccH-HHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGF-STSAS 155 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~-~a~~~ 155 (457)
++.++|+..+.. .++..|.+++++.+.+....... + .. ....+|++.+|++++.+ ..+++++|+ +++..
T Consensus 25 ~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--Y----~~-~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~ 96 (356)
T PRK04870 25 ATGMVKLDAMEN-PYRLPAELRAELGERLAEVALNR--Y----PD-PRAAALKAALRAAMGVPAGADVLLGNGSDELIQL 96 (356)
T ss_pred CCCceeCcCCCC-CCCCCHHHHHHHHHHhhcccccc--C----CC-CCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHH
Confidence 467899987654 45557899999998886422211 1 11 12478899999999854 245566555 67888
Q ss_pred HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447 156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS 230 (457)
Q Consensus 156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~ 230 (457)
++.+++++||.|++..++|..+...++..|.+++.++.+ |++++++.+.. .++++|++.+++||+
T Consensus 97 ~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~----------~~~~~v~l~~p~NPt 166 (356)
T PRK04870 97 LALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAE----------HRPALVFLAYPNNPT 166 (356)
T ss_pred HHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc----------CCCCEEEEcCCCCCC
Confidence 888889999999999999999888889999998887643 67888887754 245677777889999
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHH
Q psy15447 231 ADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHH 307 (457)
Q Consensus 231 G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~ 307 (457)
|.+.+.+++.++++..++++|+||+|.... +. ...... ...+..+++.|||| +|.+| ||+++++++++.+
T Consensus 167 G~~~~~~~~~~i~~~~~~~ii~De~y~~~~-~~---~~~~~~--~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~~ 239 (356)
T PRK04870 167 GNLFDDADVERIIEAAPGLVVVDEAYQPFA-GD---SWLPRL--ARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAEL 239 (356)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEECCchhhc-Cc---chHHHH--hhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHHH
Confidence 999998888888887789999999986321 11 111111 11122588999999 76655 9999999999888
Q ss_pred HhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchH
Q psy15447 308 RLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEV 387 (457)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 387 (457)
+.....+ +.+.+..+++..+++..+..++.+++++++.+++.+.|++ .+++.+. +..+.++++.+++
T Consensus 240 ~~~~~~~----~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~-~~~~~~~~~~~~~----- 306 (356)
T PRK04870 240 DKVRPPY----NVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAA---LPGVTVF-PSAANFILVRVPD----- 306 (356)
T ss_pred HHccCCC----cCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh---CCCcEEC-CCCCeEEEEECCC-----
Confidence 6543222 2355555555555543222234567788888899998987 4577654 5567788887652
Q ss_pred HHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 388 ASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 388 ~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
..++.+.|.++||.+++...+. ....+++|++++ +.+++++++++|+++
T Consensus 307 -----~~~~~~~l~~~gI~v~~~~~f~---~~~~~~iRis~~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 307 -----AAAVFDGLKTRGVLVKNLSGMH---PLLANCLRVTVG---TPEENAQFLAALKAA 355 (356)
T ss_pred -----HHHHHHHHHHCCEEEEECCCCC---CCCCCeEEEeCC---CHHHHHHHHHHHHHh
Confidence 2367888999999998765321 123579999996 799999999999875
No 191
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.95 E-value=5.3e-25 Score=217.79 Aligned_cols=333 Identities=15% Similarity=0.113 Sum_probs=225.5
Q ss_pred eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCc--ccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHH
Q psy15447 82 CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGF--YGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAI 157 (457)
Q Consensus 82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~--~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai 157 (457)
|+|.++..+ .++.+.+++.+.+..+. ++.+.... .-..+...++++.+++++|.+ .++++++|++++..++
T Consensus 2 yld~aa~~~----~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al 76 (379)
T TIGR03402 2 YLDNNATTR----VDPEVLEAMLPYFTEYF-GNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAI 76 (379)
T ss_pred cCCCcCCCC----CCHHHHHHHHHHHHhcC-CCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHH
Confidence 455554322 25789999988886532 21111110 112456778889999999965 4677778889998888
Q ss_pred Hhhc---CCCCEEEEeCcccHHHHHH---HHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447 158 AAYV---KRNDAVFVDENINFAIQTG---LIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV 226 (457)
Q Consensus 158 ~a~~---~~gd~v~~~~~~h~~~~~~---~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v 226 (457)
.++. .+++.|++....|++.... +...|.++..++. .|++++++.+++ ++++++++++
T Consensus 77 ~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~~-----------~~~lv~i~~~ 145 (379)
T TIGR03402 77 KSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAITD-----------DTALVSVMWA 145 (379)
T ss_pred HHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcCC-----------CcEEEEEEcc
Confidence 7653 4568899998888876543 3335788777753 367888887742 4578889999
Q ss_pred CCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHH
Q psy15447 227 YMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIE 305 (457)
Q Consensus 227 ~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~ 305 (457)
+|++|.+.|+++|.++|++||+++++|++|++|... .++...++|+++.|.+|.+|+.| |++..++...
T Consensus 146 ~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~G~g~l~v~~~~~- 215 (379)
T TIGR03402 146 NNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIP---------IDLKEMNIDMLSLSGHKLHGPKGVGALYIRKGTR- 215 (379)
T ss_pred cCCeeecccHHHHHHHHHHcCCEEEEECcccccccc---------cCcccCCCCEEEEcHHHcCCCCceEEEEECCCCC-
Confidence 999999999999999999999999999999876431 22222456899999999666555 7776665431
Q ss_pred HHHhhC------CcceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC---CCe
Q psy15447 306 HHRLSG------SGYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD---TPL 375 (457)
Q Consensus 306 ~~~~~~------~~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~---~~~ 375 (457)
+.+.. ... ..++.+.....+..++++++.+. ++..++.+++.+++++.|++ .++++.+.++.. +.+
T Consensus 216 -~~p~~~g~~~~~~~-~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~--~~~~~~~~~~~~~~~~~~ 291 (379)
T TIGR03402 216 -FRPLLRGGHQERGR-RAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLA--RIPDARLNGDPTKRLPNT 291 (379)
T ss_pred -CCCcccCCccCCCc-CCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh--hCCCEEEeCCCccCCCCE
Confidence 11111 001 12344555556666777766543 34456777888888888863 136777765322 235
Q ss_pred EEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccC--------------CCCCeEEEEecCCCCHHHHHHHH
Q psy15447 376 KYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAK--------------KQKPSIRITCNISHTEQDMNSLI 441 (457)
Q Consensus 376 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~--------------~~~~~lRi~~~~~~t~edi~~~~ 441 (457)
+.+.+... ...++...|.++||.++.+..|..... ...+.+|++++..+|++|||+++
T Consensus 292 ~~~~~~~~--------~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~ 363 (379)
T TIGR03402 292 VNISFEYI--------EGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVL 363 (379)
T ss_pred EEEEecCC--------CHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHH
Confidence 55555433 235788888889999988765543110 01368999999999999999999
Q ss_pred HHHHHHHHHhc
Q psy15447 442 ETLCKSHDIAV 452 (457)
Q Consensus 442 ~~l~~~~~~~~ 452 (457)
++|+++++.+.
T Consensus 364 ~~l~~~~~~~~ 374 (379)
T TIGR03402 364 EVLPPIIARLR 374 (379)
T ss_pred HHHHHHHHHHH
Confidence 99999887654
No 192
>PLN02187 rooty/superroot1
Probab=99.95 E-value=8.7e-25 Score=220.07 Aligned_cols=345 Identities=12% Similarity=0.094 Sum_probs=225.5
Q ss_pred CCeeeEEeecCCcc--C-CCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC--------CCcEEEe
Q psy15447 78 NGIPCINFATHNYL--S-FVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG--------LEETALY 146 (457)
Q Consensus 78 ~G~~~id~~s~~~l--~-~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~~~i~~ 146 (457)
+++.+|++..+++- . +...+++.+++.+.++. +... .|+...-..+|++.+|++++ .++++++
T Consensus 64 ~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~-~~~~-----~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it 137 (462)
T PLN02187 64 VNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRS-GKGN-----SYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLT 137 (462)
T ss_pred CCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhC-CCCC-----CCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEe
Confidence 36889999876432 1 33456788888888764 2111 12222223456666666552 3455666
Q ss_pred cccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccE
Q psy15447 147 SFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKK 219 (457)
Q Consensus 147 ~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~ 219 (457)
+++++++..++.+++++||.|++..++|..+...+...|.++..++. .|++++++.++. +++
T Consensus 138 ~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~-----------~~~ 206 (462)
T PLN02187 138 AGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADE-----------NTV 206 (462)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCC-----------CcE
Confidence 67779999999999999999999999999888788888988877653 257788776532 346
Q ss_pred EEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCC-CccccccCCCCCCccEEEecCcccccCcc-
Q psy15447 220 FIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTG-HGVTEYFGVSTEEVDMIIGSLEHALGSVG- 294 (457)
Q Consensus 220 ~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g-~~~~~~~~~~~~~~Di~~~s~sK~lg~~g- 294 (457)
++++.+++||+|.+.+ +++|.++|++||+++|+||+|....++... ..+.. +......|+++||||.++.+|
T Consensus 207 ~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~---~~~~~~vi~l~SfSK~f~~pGl 283 (462)
T PLN02187 207 AMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGK---FASIVPVLTLAGISKGWVVPGW 283 (462)
T ss_pred EEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHH---hccCCcEEEEecchhhcCCccc
Confidence 7777778899999998 789999999999999999999865553211 11111 111112488999999997666
Q ss_pred --cEEEec-H-HH---HHHHHhhCCcceecCCCcHHHHHHHHHHHHHH--hhCcHHHHHHHHHHHHHHHHhhcccccCCe
Q psy15447 295 --GFCVGS-S-YI---IEHHRLSGSGYCFSASLPPFLAVAANKALHLL--KANPSLLTKLREKCNTMHSLLSQHKVTQRF 365 (457)
Q Consensus 295 --G~v~~~-~-~~---~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~--~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~ 365 (457)
||++++ + .+ ++.+......+..+.+.+.+..+++.+.++.- +...+.++.++++.+.+.+.|++ +++.
T Consensus 284 RiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~---~~~~ 360 (462)
T PLN02187 284 KIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKD---IPCV 360 (462)
T ss_pred eeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhh---CCCC
Confidence 999873 3 22 23333322223333334666666666666421 11134667788889999999988 3333
Q ss_pred EE-eccCCCCeEEEEecCCcchHHHHHHHHHHHH-HHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHH
Q psy15447 366 LV-QGHRDTPLKYLYLQKSDDEVASKKLLQTICD-MCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIET 443 (457)
Q Consensus 366 ~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~ 443 (457)
.. ..+.++.++++.+....... .....+++. .+.++||.+.++..+ ...+++||++.. .++.+++.++.
T Consensus 361 ~~~~~P~gg~fl~~~l~~~~~~~--~~~~~~~~~~ll~~~gV~v~pG~~f-----g~~~~iRis~~~--~~e~l~~al~r 431 (462)
T PLN02187 361 VCPKKPESCTYLLTKLELSLMDN--IKDDIDFCVKLAREENLVFLPGDAL-----GLKNWMRITIGV--EAHMLEDALER 431 (462)
T ss_pred cCCCCCCEeEEEEeecChhhCCC--CCCHHHHHHHHHhhCCEEEECcccc-----CCCCeEEEEeCC--CHHHHHHHHHH
Confidence 22 22445677777664210000 001224444 456789999987642 236899999974 68999999999
Q ss_pred HHHHHHHhcCC
Q psy15447 444 LCKSHDIAVQP 454 (457)
Q Consensus 444 l~~~~~~~~~~ 454 (457)
|.++++....+
T Consensus 432 L~~~l~~~~~~ 442 (462)
T PLN02187 432 LKGFCTRHAKK 442 (462)
T ss_pred HHHHHHHhhhc
Confidence 99998766544
No 193
>KOG0257|consensus
Probab=99.95 E-value=4.8e-26 Score=212.49 Aligned_cols=332 Identities=17% Similarity=0.195 Sum_probs=234.7
Q ss_pred cCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-----CcEEEecccHHHHHHHHHhhcCCCC
Q psy15447 91 LSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-----EETALYSFGFSTSASAIAAYVKRND 165 (457)
Q Consensus 91 l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-----~~~i~~~sG~~a~~~ai~a~~~~gd 165 (457)
..+.....+.+++++.+..... .-+...||..++...|++++++++|. +++++++++.+++..++.+++.+||
T Consensus 41 p~~~~P~fv~ea~~~~~~~~~~--~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GD 118 (420)
T KOG0257|consen 41 PDFPPPKFVTEAAKNAAKEPST--NQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGD 118 (420)
T ss_pred CCCCCcHHHHHHHHHHhccchh--ccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCC
Confidence 3444456788888888876322 11223467888999999999998873 3456666777999999999999999
Q ss_pred EEEEeCcccHHHHHHHHhcCCeEEEecCC-------------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCC
Q psy15447 166 AVFVDENINFAIQTGLIASRCKVQYFKHN-------------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD 232 (457)
Q Consensus 166 ~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~ 232 (457)
.|++-++++.++....++.|.+.+.++.. |++++|..+.+ ++++|++++++||+|.
T Consensus 119 eVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~-----------kTk~Ii~ntPhNPtGk 187 (420)
T KOG0257|consen 119 EVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITE-----------KTKAIILNTPHNPTGK 187 (420)
T ss_pred EEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccC-----------CccEEEEeCCCCCcCc
Confidence 99999999999999999999887766533 78999998854 6789999999999999
Q ss_pred CCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCC-ccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHH
Q psy15447 233 ICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGH-GVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIE 305 (457)
Q Consensus 233 i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~-~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~ 305 (457)
+.+ |++|++||++||+++|.||+|.+.++...-+ .++..-|. .+..|-++|+||++|..| ||+++++.++.
T Consensus 188 vfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm--~ertitvgS~gKtf~~TGWrlGW~igp~~L~~ 265 (420)
T KOG0257|consen 188 VFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGM--YERTITVGSFGKTFGVTGWRLGWAIGPKHLYS 265 (420)
T ss_pred ccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCch--hheEEEeccccceeeeeeeeeeeeechHHhhh
Confidence 988 8999999999999999999998766643211 12222232 345688999999999887 99999998888
Q ss_pred HHHhhCCcceecCCCcHHHHHHHHHHHHHHh--h-------CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeE
Q psy15447 306 HHRLSGSGYCFSASLPPFLAVAANKALHLLK--A-------NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLK 376 (457)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~--~-------~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 376 (457)
..+......+|..+ .|.. .|..+++..-. . ..++.+.++++++.+.+.|.+ .|+.+..+.+++++
T Consensus 266 ~~~~vh~~~~~~~~-Tp~q-~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~----lg~~v~~p~gayyl 339 (420)
T KOG0257|consen 266 ALFPVHQNFVFTCP-TPIQ-EASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEE----LGLKVTGPEGAYYL 339 (420)
T ss_pred hHHHHhhccccccC-cHHH-HHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHh----cCCccccCCCceEE
Confidence 87766555566543 3332 22222222111 0 123678899999999999999 68888878888888
Q ss_pred EEEecCCcch---HHH--HHHHHHHHHHHHHc-CeeEeccccCcc--ccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447 377 YLYLQKSDDE---VAS--KKLLQTICDMCIQA-GFAITCPSHLDQ--EAKKQKPSIRITCNISHTEQDMNSLIETLC 445 (457)
Q Consensus 377 ~i~~~~~~~~---~~~--~~~~~~~~~~l~~~-Gi~v~~~~~~~~--~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 445 (457)
+..+...... +.. .-...+++.++.++ |+.+.|...+.. +.....+.+|++.. -+++-++..++.++
T Consensus 340 ~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~--k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 340 WADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFC--KADETLRKAIERLK 414 (420)
T ss_pred EEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHH--hhHHHHHHHHHHHh
Confidence 8877722111 000 00234577888765 887766554322 11111445676664 35666777776666
No 194
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.95 E-value=9e-25 Score=217.78 Aligned_cols=329 Identities=12% Similarity=0.060 Sum_probs=221.2
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCc--ccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGF--YGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASA 156 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~--~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~a 156 (457)
.++.|.++. .+.. ++.+.+++.+.++.++......... .+......++++ + +++|.+ .+++++|+++++..+
T Consensus 27 ~~iyld~~a-~g~~-p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~~ 102 (406)
T TIGR01814 27 AVIYLDGNS-LGLM-PKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKEDEVVVMNTLTINLHLL 102 (406)
T ss_pred CcEEecCCC-cCcC-cHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCCcEEEeCCchHHHHHH
Confidence 344444433 3544 6789999998888775433222111 122334444444 4 788854 567777888888888
Q ss_pred HHhhcCCC---CEEEEeCcccHHHHHH----HHhcCCeE----EEecC-----CCHHHHHHHHHhhchhcccCCCCccEE
Q psy15447 157 IAAYVKRN---DAVFVDENINFAIQTG----LIASRCKV----QYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKF 220 (457)
Q Consensus 157 i~a~~~~g---d~v~~~~~~h~~~~~~----~~~~g~~~----~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~ 220 (457)
+.++.+++ +.|+++...|.+.... .+..|.++ ..++. .|++++++.++... +++++
T Consensus 103 ~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~--------~~t~l 174 (406)
T TIGR01814 103 LASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNG--------DDIAV 174 (406)
T ss_pred HHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcC--------CCeEE
Confidence 88776553 3788888888885443 34556665 33332 17788888886532 46789
Q ss_pred EEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEe
Q psy15447 221 IIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVG 299 (457)
Q Consensus 221 vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~ 299 (457)
|+++++++.+|.+.|+++|.++|++||+++++|++|++|... +++...++|++++|.+|++ |++||++..
T Consensus 175 v~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~---------id~~~~gvD~~~~s~hK~l~g~pG~~l~v 245 (406)
T TIGR01814 175 ILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVP---------LDLHDWGVDFACWCTYKYLNAGPGAGAFV 245 (406)
T ss_pred EEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcc---------cccccCCCCEEEEcCccccCCCCCeEEEE
Confidence 999999999999999999999999999999999999987642 2333356799999999998 455655444
Q ss_pred cHHHHHHHHhhCCcc--------------------e-ecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHh
Q psy15447 300 SSYIIEHHRLSGSGY--------------------C-FSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLL 356 (457)
Q Consensus 300 ~~~~~~~~~~~~~~~--------------------~-~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L 356 (457)
.++..+.+.....++ . ..++.+...+++..++++++.+. +...++.+++.+++++.|
T Consensus 246 ~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l 325 (406)
T TIGR01814 246 HEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELI 325 (406)
T ss_pred ehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 333232222110010 0 12345666777777889988654 456788889999999988
Q ss_pred hccc-ccCCeEEeccC----CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe-cC
Q psy15447 357 SQHK-VTQRFLVQGHR----DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC-NI 430 (457)
Q Consensus 357 ~~~~-~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~-~~ 430 (457)
++.. ..+++++.++. .++++.+.++ . ...++.+.|.++||.+... ..+.+|+++ +.
T Consensus 326 ~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~--~-------~~~~~~~~L~~~gi~v~~~---------~~~~iRiS~~~~ 387 (406)
T TIGR01814 326 KARCGGPPVLTIITPRDHAQRGCQLSLTHP--V-------PGKAVFQALIKRGVIGDKR---------EPSVIRVAPVPL 387 (406)
T ss_pred HhhcCCCCceEEeCCCChhhcCCeEEEEec--C-------CHHHHHHHHHHCCEEEecc---------CCCeEEEechhc
Confidence 7721 01357766432 2456666665 1 2357888999999987532 136899999 68
Q ss_pred CCCHHHHHHHHHHHHHHH
Q psy15447 431 SHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 431 ~~t~edi~~~~~~l~~~~ 448 (457)
.+|++||++++++|++++
T Consensus 388 ~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 388 YNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred cCCHHHHHHHHHHHHHHh
Confidence 999999999999998764
No 195
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.95 E-value=9.7e-25 Score=217.28 Aligned_cols=336 Identities=14% Similarity=0.134 Sum_probs=224.3
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCC-CCC-CcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSC-GPR-GFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSAS 155 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~-~~~-~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ 155 (457)
+-|+|.++..+ .++.+.+++.+.+......+. ... ......+..+++++.+++++|.+ .++++++|++++..
T Consensus 4 ~~yld~aa~~~----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~ 79 (402)
T TIGR02006 4 PIYLDYAATTP----VDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNL 79 (402)
T ss_pred cEEeeCCcCCC----CCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHH
Confidence 35677766432 368899999888865422111 010 11112356778899999999965 56777788889888
Q ss_pred HHHhh----cCCCCEEEEeCcccHHHHHHH---HhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447 156 AIAAY----VKRNDAVFVDENINFAIQTGL---IASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIV 223 (457)
Q Consensus 156 ai~a~----~~~gd~v~~~~~~h~~~~~~~---~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~ 223 (457)
++.++ .++||.|+++...|.+..... ...|.++..++.+ |++++++.+.+ +++++++
T Consensus 80 ~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-----------~~~lv~v 148 (402)
T TIGR02006 80 AIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIRD-----------DTILVSI 148 (402)
T ss_pred HHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCC-----------CCEEEEE
Confidence 77664 368999999999999866553 3457888777643 68888877642 4578999
Q ss_pred ecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHH
Q psy15447 224 EGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSY 302 (457)
Q Consensus 224 e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~ 302 (457)
++++|++|.+.|+++|.++|++||+++++|++|++|... .++...++|+++.|.+|.+|+.| |+++.+++
T Consensus 149 ~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~---------~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~~~ 219 (402)
T TIGR02006 149 MHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIP---------INVNELKVDLMSISGHKIYGPKGIGALYVRRK 219 (402)
T ss_pred ECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcc---------cCccccCCCEEEEehhhhcCCCceEEEEEccC
Confidence 999999999999999999999999999999999876542 12222356899999999888644 66666654
Q ss_pred HHHHHHhhCCc-----ceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC--CCC
Q psy15447 303 IIEHHRLSGSG-----YCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR--DTP 374 (457)
Q Consensus 303 ~~~~~~~~~~~-----~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~--~~~ 374 (457)
....+.....+ ....++.+...+++..++++.+++. +...++.+++.+++++.|++ ++++.+.++. ..+
T Consensus 220 ~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~---~~~v~~~~~~~~~~p 296 (402)
T TIGR02006 220 PRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKS---IEEVYLNGDLEHRVP 296 (402)
T ss_pred CCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc---CCCEEEeCCccccCC
Confidence 33222111110 0122345565666666788877543 34567788889999999887 5677665432 122
Q ss_pred -eEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc--------------CCCCCeEEEEecCCCCHHHHHH
Q psy15447 375 -LKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA--------------KKQKPSIRITCNISHTEQDMNS 439 (457)
Q Consensus 375 -~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--------------~~~~~~lRi~~~~~~t~edi~~ 439 (457)
+..+.+... ....+...+ +|+.++.+.++.... ....+.+|++++..+|++|+|+
T Consensus 297 ~~~~v~f~~~--------~~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~ 366 (402)
T TIGR02006 297 GNLNVSFNYV--------EGESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDY 366 (402)
T ss_pred CeEEEEEeCc--------CHHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHH
Confidence 223333321 122444444 488777665543200 0113689999999999999999
Q ss_pred HHHHHHHHHHHhc
Q psy15447 440 LIETLCKSHDIAV 452 (457)
Q Consensus 440 ~~~~l~~~~~~~~ 452 (457)
++++|+++++.++
T Consensus 367 l~~~l~~~~~~~~ 379 (402)
T TIGR02006 367 AVKLVKSAIDKLR 379 (402)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999887663
No 196
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.95 E-value=8.2e-25 Score=224.05 Aligned_cols=339 Identities=11% Similarity=0.087 Sum_probs=220.7
Q ss_pred CCeeeEEeecCCc--cCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc------C--CCcEEEec
Q psy15447 78 NGIPCINFATHNY--LSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM------G--LEETALYS 147 (457)
Q Consensus 78 ~G~~~id~~s~~~--l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g--~~~~i~~~ 147 (457)
.|+.+++|+.++. +++...+++.+++.+.+... .. +....|. .+|++.+++++ + .+++++++
T Consensus 144 ~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~-~~---Y~~~~G~----~~lReaia~~~~~~~~~~~~~~~I~it~ 215 (517)
T PRK13355 144 AGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDT-EG---YSDSKGL----FSARKAIMQYAQLKGLPNVDVDDIYTGN 215 (517)
T ss_pred cCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcC-CC---CCCCcCh----HHHHHHHHHHHHhcCCCCCChhHEEEeC
Confidence 4788999988554 45655688999988887642 22 2222344 45555555554 2 23455555
Q ss_pred ccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEE
Q psy15447 148 FGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKF 220 (457)
Q Consensus 148 sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~ 220 (457)
++++++..++.+++++||.|++..++|..+...+...|.+++.++. .|++++++.+. +++++
T Consensus 216 G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-----------~~~k~ 284 (517)
T PRK13355 216 GVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKIT-----------SRTKA 284 (517)
T ss_pred cHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcC-----------cCceE
Confidence 6668999999999999999999999999888888888988776643 26778877664 24567
Q ss_pred EEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---
Q psy15447 221 IIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG--- 294 (457)
Q Consensus 221 vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g--- 294 (457)
|++.+++||||.+.+ +++|.++|++||+++|+||+|....+.. ..........++...++++||||.++.+|
T Consensus 285 i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~--~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~Ri 362 (517)
T PRK13355 285 IVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDG--LEHTSIASLAPDLFCVTFSGLSKSHMIAGYRI 362 (517)
T ss_pred EEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCC--CCcccHHHhCCCCeEEEEecchhhccCcccce
Confidence 777788999999998 7899999999999999999997544432 11111111223333466799999997665
Q ss_pred cEEE--ecHHH----HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHH---HHHHHHHHHHHHHHhhcccccCCe
Q psy15447 295 GFCV--GSSYI----IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSL---LTKLREKCNTMHSLLSQHKVTQRF 365 (457)
Q Consensus 295 G~v~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~---~~~l~~~~~~l~~~L~~~~~~~~~ 365 (457)
||++ +++++ ++.+..... ..+ ..+.++..++.++|+......+. ..++.++.+++.+.|++ ++|+
T Consensus 363 G~~i~~~~~~~~~~~~~~l~~~~~-~~~--~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~---~~g~ 436 (517)
T PRK13355 363 GWMILSGNKRIAKDYIEGLNMLAN-MRL--CSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNA---IPGI 436 (517)
T ss_pred EEEEeeCchhhHHHHHHHHHHHhc-CcC--CcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhc---CCCc
Confidence 9988 44443 333322211 112 23455556666665321000111 12445567888888887 4588
Q ss_pred EEeccCCCCeEEEEecCCc-chHHHHHHHHHH-HHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHH
Q psy15447 366 LVQGHRDTPLKYLYLQKSD-DEVASKKLLQTI-CDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIET 443 (457)
Q Consensus 366 ~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~-~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~ 443 (457)
.+..+.++.++++.+.... ... ...++ .+.|.++||.+.++..+. ....+++|+++. .+++++++.++.
T Consensus 437 ~~~~p~g~fy~~~~l~~~~~~~~----~~~~~~~~ll~~~gV~v~pg~~F~---~~~~~~~Ris~~--~~~~~l~~a~~r 507 (517)
T PRK13355 437 SAVKPKAAFYIFPKIDVKKFNIH----DDEQFALDLLHDKKVLIVQGTGFN---WDKPDHFRVVYL--PRLEDLEDAMDR 507 (517)
T ss_pred ccCCCCeeeEEEeecCcccCCCC----CHHHHHHHHHHhCCEEEeCcchhC---CCCcCEEEEEeC--CCHHHHHHHHHH
Confidence 7765555666666665310 000 12234 455667899999876532 124679999994 689999999999
Q ss_pred HHHHHHHhc
Q psy15447 444 LCKSHDIAV 452 (457)
Q Consensus 444 l~~~~~~~~ 452 (457)
|.++++..+
T Consensus 508 l~~~~~~~~ 516 (517)
T PRK13355 508 LADFFSYYR 516 (517)
T ss_pred HHHHHHHhh
Confidence 999887543
No 197
>PLN02656 tyrosine transaminase
Probab=99.95 E-value=3.3e-24 Score=213.74 Aligned_cols=344 Identities=13% Similarity=0.086 Sum_probs=226.4
Q ss_pred CCeeeEEeecCCcc---CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccH
Q psy15447 78 NGIPCINFATHNYL---SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGF 150 (457)
Q Consensus 78 ~G~~~id~~s~~~l---~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~ 150 (457)
.|+.+++|..+++- .+..++.+.+++.+.+...... ++....|..++.+.+++.+.+..| .+.++++++++
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~ 106 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFN--GYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCT 106 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCC--CCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChH
Confidence 57889999877652 2445688999988888752211 111122344444444444443323 24567777778
Q ss_pred HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447 151 STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIV 223 (457)
Q Consensus 151 ~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~ 223 (457)
+++..++.+++++||.|++..++|..+.......|.++..++. .|++++++.++. +++++++
T Consensus 107 ~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~-----------~~~~v~l 175 (409)
T PLN02656 107 QAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQ-----------NTVALVI 175 (409)
T ss_pred HHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhcc-----------CceEEEE
Confidence 9999999999999999999999998877777778888877653 267777776642 3456677
Q ss_pred ecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEE
Q psy15447 224 EGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFC 297 (457)
Q Consensus 224 e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v 297 (457)
.+++||+|.+.+ +++|.++|++||+++|+||+|+...+.. ........+......|+++||||.++.+| ||+
T Consensus 176 ~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~ 253 (409)
T PLN02656 176 INPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGS--NPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWF 253 (409)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCC--CCcccHHHhcccCcEEEEcccchhccCcceeEEEE
Confidence 778999999976 7789999999999999999997544432 11111111112223588999999987665 999
Q ss_pred Eec--------HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH--hhCcHHHHHHHHHHHHHHHHhhcccccCCeEE
Q psy15447 298 VGS--------SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL--KANPSLLTKLREKCNTMHSLLSQHKVTQRFLV 367 (457)
Q Consensus 298 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~--~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~ 367 (457)
+++ +++++.+...... . .+.+.+..+++.+.++.. ....+.++.++++.+.+.+.|++ .+++..
T Consensus 254 i~~~~~~~~~~~~~~~~~~~~~~~--~-~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~---~~~~~~ 327 (409)
T PLN02656 254 VTTDPSGSFRDPKIVERIKKYFDI--L-GGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKE---IPCITC 327 (409)
T ss_pred EEeCcccccccHHHHHHHHHHHhh--h-cCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhh---CCCCcC
Confidence 883 5677777543221 1 123566666666666421 11134567788888889998887 333322
Q ss_pred -eccCCCCeEEEEecCCcchHHHHHHHHH-HHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447 368 -QGHRDTPLKYLYLQKSDDEVASKKLLQT-ICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLC 445 (457)
Q Consensus 368 -~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 445 (457)
..+.++.++|+.++....... ....+ +.+.|.++||.+.++..+ ...+++||++.. +++++++.++.|+
T Consensus 328 ~~~p~gg~~~w~~l~~~~~~~~--~~~~~~~~~~l~~~gV~v~pg~~f-----g~~~~iRi~~~~--~~e~l~eal~rl~ 398 (409)
T PLN02656 328 PHKPEGSMAVMVKLNLSLLEDI--SDDIDFCFKLAREESVIILPGTAV-----GLKNWLRITFAA--DPSSLEEALGRIK 398 (409)
T ss_pred CcCCCeEEEEEEecchhhcCCC--CCHHHHHHHHHHhCCEEEecchhc-----CCCCeEEEEeCC--CHHHHHHHHHHHH
Confidence 234556778887742100000 01223 445667789999988653 235799999984 7999999999999
Q ss_pred HHHHHh
Q psy15447 446 KSHDIA 451 (457)
Q Consensus 446 ~~~~~~ 451 (457)
+++...
T Consensus 399 ~~~~~~ 404 (409)
T PLN02656 399 SFYLRH 404 (409)
T ss_pred HHHHHh
Confidence 887644
No 198
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.95 E-value=2e-24 Score=214.48 Aligned_cols=336 Identities=12% Similarity=0.069 Sum_probs=224.2
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----C--cEEE-ecccH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----E--ETAL-YSFGF 150 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~--~~i~-~~sG~ 150 (457)
.|++++||..+.+ .+...+.+.+++.+.+... . .+....|..++...+++.+.+..|. + +.++ +++++
T Consensus 26 ~~~~~i~l~~~~p-~~~~~~~~~~a~~~~~~~~-~---~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~ 100 (393)
T TIGR03538 26 ASKPPIALSIGEP-KHPTPAFVLEALRENLHGL-S---TYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTR 100 (393)
T ss_pred cCCCeEEecCCCC-CCCCCHHHHHHHHHHhhcc-C---CCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcH
Confidence 4688999988765 4445678888888776431 1 1222334455555555555444332 2 3344 55566
Q ss_pred HHHHHHHHhhcCCCCE--EEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447 151 STSASAIAAYVKRNDA--VFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFI 221 (457)
Q Consensus 151 ~a~~~ai~a~~~~gd~--v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~v 221 (457)
+++..++.+++++||. |+++.++|..+...++..|.++..++.. |++++++.+.+ +++++
T Consensus 101 ~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-----------~~k~i 169 (393)
T TIGR03538 101 EALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWR-----------RCQLL 169 (393)
T ss_pred HHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhh-----------cceEE
Confidence 8999999999999985 8899999988887788889888877642 56777776643 34677
Q ss_pred EEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCC--CCccc---cccCCCCCCccEEEecCcccccCc
Q psy15447 222 IVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGST--GHGVT---EYFGVSTEEVDMIIGSLEHALGSV 293 (457)
Q Consensus 222 i~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~--g~~~~---~~~~~~~~~~Di~~~s~sK~lg~~ 293 (457)
++.+++||+|.+.+ +++|.++|++||+++|+||+|....+... ..... ...+....+..|+++||||.++.+
T Consensus 170 ~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~ 249 (393)
T TIGR03538 170 FVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLP 249 (393)
T ss_pred EEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCc
Confidence 77789999999998 67899999999999999999875443311 11111 111111112248899999998766
Q ss_pred c---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc
Q psy15447 294 G---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH 370 (457)
Q Consensus 294 g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~ 370 (457)
| ||+++++++++.+...... .+.+.+++...++.+++..-+.....++.++++.+.+.+.|++ . +.+..+
T Consensus 250 GlRvG~~i~~~~l~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~---~--~~~~~p 322 (393)
T TIGR03538 250 GLRSGFVAGDAEILKAFLRYRTY--HGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQ---V--LDLELP 322 (393)
T ss_pred ccceEEEecCHHHHHHHHHHHHh--hccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHh---h--CcccCC
Confidence 6 9999999998887643321 2223456666666555532111234566778888888888876 2 233345
Q ss_pred CCCCeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccc---cCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 371 RDTPLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQE---AKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 371 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~---~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
.++.++|+.++. ...+++++|+ ++||.+.++..+... ...+.+++||++.. +++++++++++|++
T Consensus 323 ~gg~f~~~~~~~---------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~--~~~~l~~~l~~l~~ 391 (393)
T TIGR03538 323 DAGFYLWPKVPG---------DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA--PLEECVEAAERIRS 391 (393)
T ss_pred CeeEEEEEECCC---------CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC--CHHHHHHHHHHHHH
Confidence 678888888762 2346888876 579999988754210 12235799999874 68999999998876
Q ss_pred H
Q psy15447 447 S 447 (457)
Q Consensus 447 ~ 447 (457)
.
T Consensus 392 ~ 392 (393)
T TIGR03538 392 F 392 (393)
T ss_pred h
Confidence 4
No 199
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.95 E-value=3e-24 Score=210.64 Aligned_cols=291 Identities=17% Similarity=0.200 Sum_probs=210.3
Q ss_pred hHHHHHHHHHHHhhcCCC----cEEEecccHHHHHHHHHhhcCCCCE-EEEeCcccHH-HHHHHHhcCCeEEEecC----
Q psy15447 124 NVVHLDLENDIASFMGLE----ETALYSFGFSTSASAIAAYVKRNDA-VFVDENINFA-IQTGLIASRCKVQYFKH---- 193 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~~ai~a~~~~gd~-v~~~~~~h~~-~~~~~~~~g~~~~~~~~---- 193 (457)
.+...++++.+++++|.+ .++++++|++++..++.++..++|. |+.+.++|+. ........|.++..++.
T Consensus 30 ~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~~~ 109 (355)
T TIGR03301 30 NDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGERLAKICEYLGIPHTDLNFSEYE 109 (355)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhHHHHHHHHcCCceEEEecCCCC
Confidence 477889999999999965 2446789999999999998877765 5556666655 33445667877776653
Q ss_pred -CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcccccc
Q psy15447 194 -NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYF 272 (457)
Q Consensus 194 -~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~ 272 (457)
.|++++++.+++. ++.+++++.++.+++|.+.|+++|.++|++||+++|+|+++++|... +
T Consensus 110 ~~d~~~l~~~l~~~---------~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~---------~ 171 (355)
T TIGR03301 110 PPDLNRIEEALAAD---------PDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIP---------I 171 (355)
T ss_pred CCCHHHHHHHHHhC---------CCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcc---------c
Confidence 3788999888652 24456777778888999999999999999999999999998876431 1
Q ss_pred CCCCCCccEEEecCcccc-cCcc-cEEEecHHHHHHHHhhCCcce---------------ecCCCcHHHHHHHHHHHHHH
Q psy15447 273 GVSTEEVDMIIGSLEHAL-GSVG-GFCVGSSYIIEHHRLSGSGYC---------------FSASLPPFLAVAANKALHLL 335 (457)
Q Consensus 273 ~~~~~~~Di~~~s~sK~l-g~~g-G~v~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~aaa~a~l~~~ 335 (457)
.+...++|++++|++|++ |+.| |++++++++++.+.....++. +..+.+.....++.++++.+
T Consensus 172 ~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~ 251 (355)
T TIGR03301 172 DIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEEL 251 (355)
T ss_pred chhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHH
Confidence 222235689999999998 5555 899999998887652111111 11134666667767778766
Q ss_pred hhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC--CCC-eEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEec
Q psy15447 336 KAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR--DTP-LKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITC 409 (457)
Q Consensus 336 ~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~--~~~-~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~ 409 (457)
.+. ++..++++++.+++.+.|++ .|+.+..+. .++ ++++.++..... ...++.++|.++||.+.+
T Consensus 252 ~~~g~~~~~~~~~~~~~~~~~~~L~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gi~i~~ 322 (355)
T TIGR03301 252 EAEGGVPARIARYRRNRELLVDGLRA----LGFQPLLPERWQSPIIVSFLYPDDPDF-----DFDDFYQELKERGFVIYP 322 (355)
T ss_pred HHcccHHHHHHHHHHHHHHHHHHHHH----cCCeeecCCCCCCCcEEEEECCCCCcc-----hHHHHHHHHHHCCEEEEC
Confidence 432 45678889999999999988 466654332 233 456666532100 345789999999999987
Q ss_pred cccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 410 PSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 410 ~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
+..+ ..+++||+++..+|++|+++++++|+++
T Consensus 323 ~~~~------~~~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 323 GKLT------LADTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred Cccc------cccEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 6421 1378999998889999999999999875
No 200
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2.7e-24 Score=214.11 Aligned_cols=336 Identities=13% Similarity=0.108 Sum_probs=218.5
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc-------CCCcEEEecccHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM-------GLEETALYSFGFS 151 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-------g~~~~i~~~sG~~ 151 (457)
|..++||..+.. .+...+.+.+++.+..... .. +....|. .++++.+++++ ..+.++++++|++
T Consensus 29 ~~~~i~l~~~~~-~~~~~~~~~~a~~~~~~~~-~~---Y~~~~g~----~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~ 99 (397)
T PRK07568 29 GIKVYHLNIGQP-DIKTPEVFFEAIKNYDEEV-LA---YSHSQGI----PELREAFAKYYKKWGIDVEPDEILITNGGSE 99 (397)
T ss_pred CCCEEEecCCCC-CCCCCHHHHHHHHHHhcCC-cC---cCCCCCC----HHHHHHHHHHHHHhCCCCCcceEEEcCChHH
Confidence 345788877653 3333567777776654321 11 1112233 45556666654 2345677778889
Q ss_pred HHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC--------CHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447 152 TSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN--------NMQHLEELLRQQDERDTLNSKVTKKFIIV 223 (457)
Q Consensus 152 a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~--------d~~~le~~l~~~~~~~~~~~~~~~~~vi~ 223 (457)
++..++.+++++||.|++..++|..+....+..|.++..++.. +++++++.+. .++++|++
T Consensus 100 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~-----------~~~~~v~i 168 (397)
T PRK07568 100 AILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLIT-----------PKTKAILI 168 (397)
T ss_pred HHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcC-----------ccceEEEE
Confidence 9999999999999999999888877766677888887776531 3466666653 24567777
Q ss_pred ecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCC-CCccccccCCCCCCccEEEecCcccccCcc---cE
Q psy15447 224 EGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGST-GHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GF 296 (457)
Q Consensus 224 e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~-g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~ 296 (457)
.+++||+|.+.+ +++|.++|+++|+++|+||+|+...+... ...+....+. +++ .+++.||||.+|.+| ||
T Consensus 169 ~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~-~~~-~i~~~S~SK~~~~~G~R~G~ 246 (397)
T PRK07568 169 SNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGL-EDR-VIIIDSVSKRYSACGARIGC 246 (397)
T ss_pred ECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCC-cCC-EEEEecchhhccCCCcceEE
Confidence 788999999987 67899999999999999999875433211 1111111111 222 488999999997554 88
Q ss_pred EEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCC
Q psy15447 297 CVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTP 374 (457)
Q Consensus 297 v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~ 374 (457)
++++ +++++.+...... .+ +.+.+...++.+.++..+. .+++++.++++.+.+.+.|++ ..++.+..+.++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~-~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~p~g~~ 320 (397)
T PRK07568 247 LISKNKELIAAAMKLCQA-RL--SPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNK---IPGVVCEKPKGAF 320 (397)
T ss_pred EecCCHHHHHHHHHHhhc-cC--CCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhc---CCCceecCCCcce
Confidence 8874 6777766433221 12 2344555555455532111 134566788888999999987 4566655445556
Q ss_pred eEEEEecCCcchHHHHHHHHHHHHHHHH------cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 375 LKYLYLQKSDDEVASKKLLQTICDMCIQ------AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 375 ~~~i~~~~~~~~~~~~~~~~~~~~~l~~------~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
++|+.++.. ...+++++|.+ +||.+.++..+........+++|+++. .++++++++++.|++++
T Consensus 321 ~~~~~l~~~--------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~--~~~~~~~~~~~~l~~~l 390 (397)
T PRK07568 321 YIIAKLPVD--------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV--LNEEDLKRAMEILKEAL 390 (397)
T ss_pred EEEEecCCC--------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe--CCHHHHHHHHHHHHHHH
Confidence 677777643 23467777765 599999875432100112469999986 46899999999999988
Q ss_pred HHhc
Q psy15447 449 DIAV 452 (457)
Q Consensus 449 ~~~~ 452 (457)
+...
T Consensus 391 ~~~~ 394 (397)
T PRK07568 391 EKYN 394 (397)
T ss_pred HHhh
Confidence 7654
No 201
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.94 E-value=5e-25 Score=221.74 Aligned_cols=338 Identities=13% Similarity=0.120 Sum_probs=229.7
Q ss_pred eeeEEeec-CCccCCCCChhhHHHHHHHHH-hcCCCCCCCCCcccChHHHHHHH----HHHHhhcCCCcE-E-Ee---cc
Q psy15447 80 IPCINFAT-HNYLSFVENPDIEKCAIDCID-KNGVGSCGPRGFYGTNVVHLDLE----NDIASFMGLEET-A-LY---SF 148 (457)
Q Consensus 80 ~~~id~~s-~~~l~~~~~p~i~~a~~~~l~-~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~~-i-~~---~s 148 (457)
++.|++.. -|+ -+|.+++++...+. +|+.++.+++...|. ....+++ +++++++|.+.. + +. +|
T Consensus 34 ~~~l~l~~sen~----~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~-~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~s 108 (452)
T PTZ00094 34 IEGLELIASENF----TSRAVLECLGSCFTNKYAEGLPGNRYYGGN-EVVDKIENLCQKRALEAFGLDPEEWGVNVQPYS 108 (452)
T ss_pred HcCeeEeccccc----CCHHHHHHhcchhhccccCCCCCccccccc-hHHHHHHHHHHHHHHHHhCCCcccceeecCCCc
Confidence 45677643 333 25889999998884 565566666655554 3334444 588889996532 2 33 68
Q ss_pred cHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHh--------cC--CeEEEecCC-----CHHHHHHHHHhhchhcccC
Q psy15447 149 GFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIA--------SR--CKVQYFKHN-----NMQHLEELLRQQDERDTLN 213 (457)
Q Consensus 149 G~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~--------~g--~~~~~~~~~-----d~~~le~~l~~~~~~~~~~ 213 (457)
|++||..++.++.++||.|+++...|++....... .+ .++..++++ |++++++.+++.+
T Consensus 109 gt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~------ 182 (452)
T PTZ00094 109 GSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFR------ 182 (452)
T ss_pred hHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhC------
Confidence 99999999999999999999998888776543211 11 223344444 8999999996522
Q ss_pred CCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cC
Q psy15447 214 SKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GS 292 (457)
Q Consensus 214 ~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~ 292 (457)
++++++. .+.+|...|+++|.++|+++|+++++|++|++|.++..+. ....+++|++++|.+|++ |+
T Consensus 183 ----~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~------~~~~~~~D~l~~S~hK~l~GP 250 (452)
T PTZ00094 183 ----PKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVL------PSPFPYADVVTTTTHKSLRGP 250 (452)
T ss_pred ----CCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCC------CCCCCCCcEEEcCCccCCCCC
Confidence 2344442 3457899999999999999999999999999988753211 111135799999999988 67
Q ss_pred cccEEEecHHHHHHHHhhCCcc---eecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEE
Q psy15447 293 VGGFCVGSSYIIEHHRLSGSGY---CFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLV 367 (457)
Q Consensus 293 ~gG~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~ 367 (457)
.||++..++.+.+.+....... .+.++.++...++..++++.+... ++..+++.++.++|.+.|++ .|+++
T Consensus 251 ~Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~----~g~~v 326 (452)
T PTZ00094 251 RSGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEK----RGYDL 326 (452)
T ss_pred CceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh----CCcEE
Confidence 7888887766544332221111 233456777778888889888543 35778999999999999988 57777
Q ss_pred eccC-CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCC----HHHHHHHHH
Q psy15447 368 QGHR-DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHT----EQDMNSLIE 442 (457)
Q Consensus 368 ~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t----~edi~~~~~ 442 (457)
..+. ..++..+.+.... .....+.+.|.++||++.....|.......++.+|++++..+| ++|++++++
T Consensus 327 ~~~~~~~~~~~v~~~~~~------~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~ 400 (452)
T PTZ00094 327 VTGGTDNHLVLVDLRPFG------ITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVAD 400 (452)
T ss_pred ecCCCCCceEeecCCcCC------CCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHH
Confidence 5432 2445555444321 0344677777778999964333321111224789999966665 999999999
Q ss_pred HHHHHHHH
Q psy15447 443 TLCKSHDI 450 (457)
Q Consensus 443 ~l~~~~~~ 450 (457)
+|++++..
T Consensus 401 ~l~~~~~~ 408 (452)
T PTZ00094 401 FLDRAVKL 408 (452)
T ss_pred HHHHHHHH
Confidence 99998875
No 202
>PRK09105 putative aminotransferase; Provisional
Probab=99.94 E-value=2.3e-24 Score=211.73 Aligned_cols=314 Identities=14% Similarity=0.149 Sum_probs=221.1
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAI 157 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai 157 (457)
+.++++..|.. .++.+|.+.+++.+.+...+. |+.. ...+|++.+++++|.+ ++++++++++++..++
T Consensus 43 ~~~i~l~~~~~-~~~~~~~~~~a~~~~~~~~~~--------Y~~~-~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~ 112 (370)
T PRK09105 43 EGAVFLNANEC-PLGPSPAARDAAARSAALSGR--------YDLE-LEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAV 112 (370)
T ss_pred CCcEEecCCCC-CCCCCHHHHHHHHHHHHHhcC--------CCCc-hHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHH
Confidence 45677777643 445578999999887764221 2222 2678999999998843 4566666778999999
Q ss_pred HhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCC
Q psy15447 158 AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD 232 (457)
Q Consensus 158 ~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~ 232 (457)
.+++++||.|++..++|..+...++..|.++..++.. |++++++. . ++++++++.+++||+|.
T Consensus 113 ~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~----~--------~~~~~v~l~nP~NPTG~ 180 (370)
T PRK09105 113 LAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAA----D--------PNAGLIYICNPNNPTGT 180 (370)
T ss_pred HHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhc----C--------CCCCEEEEeCCCCCCCc
Confidence 9999999999999999999999999999998887643 45555432 1 23467777888999999
Q ss_pred CCChHHHHHHHHH--cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHH
Q psy15447 233 ICPLKDILSLRSK--YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHH 307 (457)
Q Consensus 233 i~~l~~i~~l~~~--~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~ 307 (457)
+.+.+++.++++. +++++|+||+|.. ++. +.......+. .++ .+++.||||++|.+| ||+++++++++.+
T Consensus 181 ~~~~~~l~~l~~~~~~~~~lIvDEaY~~--f~~-~~s~~~~~~~-~~~-vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l 255 (370)
T PRK09105 181 VTPRADIEWLLANKPAGSVLLVDEAYIH--FSD-APSVVDLVAQ-RKD-LIVLRTFSKLYGMAGMRLGLAAARPDLLAKL 255 (370)
T ss_pred CcCHHHHHHHHHhCCCCcEEEEECchHH--hcc-CcchHHHHhh-CCC-EEEEecccHhhcCCccceeeeecCHHHHHHH
Confidence 9998888887754 4899999999853 221 1111111111 122 378899999998777 9999999999888
Q ss_pred HhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchH
Q psy15447 308 RLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEV 387 (457)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 387 (457)
... . ..+.+.....++.++++..+..++.+++++++.+++.+.|++ .|+.+. ++.+.++++.++.
T Consensus 256 ~~~-~----~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~~~~-~~~~~f~~~~~~~----- 320 (370)
T PRK09105 256 ARF-G----HNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKK----KGYKCT-PSQANCFMVDVKR----- 320 (370)
T ss_pred Hhc-C----CCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH----CCCCcC-CCCCcEEEEeCCC-----
Confidence 654 1 122455555666666643221234567788888999999988 466664 4556666655542
Q ss_pred HHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 388 ASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 388 ~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
...++++.|.++||.+... + ...++++|+++. +++++++++++|++++
T Consensus 321 ----~~~~l~~~L~~~gI~v~~~-~-----~~~~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 321 ----PAKAVADAMAKQGVFIGRS-W-----PIWPNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred ----CHHHHHHHHHHCCcEEecC-C-----CCCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 3357899999999998432 2 123579999986 6899999999998875
No 203
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.94 E-value=3.4e-24 Score=213.46 Aligned_cols=338 Identities=13% Similarity=0.093 Sum_probs=227.1
Q ss_pred CeeeEEeecCCcc---CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC--------CcEEEec
Q psy15447 79 GIPCINFATHNYL---SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL--------EETALYS 147 (457)
Q Consensus 79 G~~~id~~s~~~l---~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--------~~~i~~~ 147 (457)
|.++++|..+++- .+...+++.+++.+.+...... .|+...-..++++.++++++. +++++++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~------~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~ 103 (403)
T TIGR01265 30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFN------GYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTS 103 (403)
T ss_pred CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCC------CCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEec
Confidence 6788999877652 3455788999888887642111 122223345677777777652 3567777
Q ss_pred ccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEE
Q psy15447 148 FGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKF 220 (457)
Q Consensus 148 sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~ 220 (457)
++++|+..++.+++.+||.|+++.+.|......+...|.++..++. .|++++++.+.. ++++
T Consensus 104 G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----------~~~~ 172 (403)
T TIGR01265 104 GCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADE-----------KTVA 172 (403)
T ss_pred ChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCc-----------CccE
Confidence 7889999999999999999999999998877777888888776643 257777776632 3467
Q ss_pred EEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---
Q psy15447 221 IIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG--- 294 (457)
Q Consensus 221 vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g--- 294 (457)
+++.+++||+|.+.+ +++|.++|+++|+++|+||+|+...++. ........+.++..-|+++||||.++.+|
T Consensus 173 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRi 250 (403)
T TIGR01265 173 IVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGD--APFIPMASFASIVPVLSLGGISKRWVVPGWRL 250 (403)
T ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC--CCccchhhhccCCcEEEEeecccccCCCcceE
Confidence 777788999999987 7899999999999999999998654432 11111111222222488999999987665
Q ss_pred cEEEec--HH-----HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH--hhCcHHHHHHHHHHHHHHHHhhcccccCCe
Q psy15447 295 GFCVGS--SY-----IIEHHRLSGSGYCFSASLPPFLAVAANKALHLL--KANPSLLTKLREKCNTMHSLLSQHKVTQRF 365 (457)
Q Consensus 295 G~v~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~--~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~ 365 (457)
||++++ +. +++.+..... . ..+.+.+...++.+.++.- ...++.+++++++.+++.+.|+. .+++
T Consensus 251 G~~v~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~ 324 (403)
T TIGR01265 251 GWIIIHDPHGIFRDTVLQGLKNLLQ-R--ILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKD---IPGL 324 (403)
T ss_pred EEEEEeCchhhhHHHHHHHHHHHhh-h--hcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc---CCCc
Confidence 998873 22 3333332211 1 1123556656665555421 11134567788888899999987 4577
Q ss_pred EEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHH-HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447 366 LVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMC-IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL 444 (457)
Q Consensus 366 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l 444 (457)
.+..+.+++++|+.++..... ......++++.+ .++||.+.++..+ ...+++||++.. .++.+++.++.|
T Consensus 325 ~~~~p~~g~f~~~~~~~~~~~--~~~~~~~~~~~l~~~~gv~v~pg~~f-----~~~~~iRis~~~--~~~~l~~~l~~l 395 (403)
T TIGR01265 325 VCPKPEGAMYLMVKLELELFP--EIKDDVDFCEKLVREESVICLPGSAF-----GLPNWVRITITV--PESMLEEACSRI 395 (403)
T ss_pred eecCCCceeEEEEeccccccC--CCCCHHHHHHHHHHhCCEEEeCcccc-----CCCCeEEEEecC--CHHHHHHHHHHH
Confidence 655566788889887642100 000234677775 4679999987653 236799999974 588899999999
Q ss_pred HHHHHH
Q psy15447 445 CKSHDI 450 (457)
Q Consensus 445 ~~~~~~ 450 (457)
.+++++
T Consensus 396 ~~~~~~ 401 (403)
T TIGR01265 396 KEFCER 401 (403)
T ss_pred HHHHHh
Confidence 887754
No 204
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.94 E-value=3.4e-25 Score=217.51 Aligned_cols=290 Identities=19% Similarity=0.255 Sum_probs=209.9
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~ 198 (457)
..+...+||++++++.|.+.+++++||++|+..++.+++++||.|+++.+.|+.+... ....|.++..++.+|+++
T Consensus 38 ~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~ 117 (369)
T cd00614 38 GNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDPEA 117 (369)
T ss_pred CChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCHHH
Confidence 5788999999999999999999999999999999999999999999999888776543 446688899999999999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.+++ ++++|++|+++||+|.+.|+++|.++|++||+++|+|++++.+.... .+ ..+
T Consensus 118 l~~~i~~-----------~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~~---------~~-~~g 176 (369)
T cd00614 118 LEAAIKP-----------ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQR---------PL-ELG 176 (369)
T ss_pred HHHhcCC-----------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcCC---------hh-hhC
Confidence 9888743 45799999999999999999999999999999999999987654311 11 124
Q ss_pred ccEEEecCcccccC----cccEEEecH-HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGS----VGGFCVGSS-YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 279 ~Di~~~s~sK~lg~----~gG~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~ 353 (457)
+|+++.|++|.+|+ .||++++++ ++++.++.... .++..++|..+++++..++.+ +.++++..+++.++.
T Consensus 177 ~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~g~~~~p~~a~~~l~~l~tl---~~r~~~~~~na~~la 251 (369)
T cd00614 177 ADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRL--ALGTILSPFDAWLLLRGLKTL---PLRMERHSENALKVA 251 (369)
T ss_pred CcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHH--hhCCCCCHHHHHHHHcCCCCH---HHHHHHHHHHHHHHH
Confidence 58999999999974 368999977 78887765432 245567888888777666543 346788899999999
Q ss_pred HHhhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccc------cC
Q psy15447 354 SLLSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPS------HL 413 (457)
Q Consensus 354 ~~L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~ 413 (457)
+.|+++..+..+..++ ...+.++.+.++.+. ..+.++.+.|.--.+..+.+. +|
T Consensus 252 ~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~------~~~~~f~~~l~~~~~~~s~G~~~sl~~~~ 325 (369)
T cd00614 252 EFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGL------EAAKKFLNALKLFSLAVSLGGVESLVEHP 325 (369)
T ss_pred HHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCH------HHHHHHHHcCCcceEcccCCCCceeeeCC
Confidence 9998843222222211 124778888886322 144555555542111111111 11
Q ss_pred cc----c--------cCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 414 DQ----E--------AKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 414 ~~----~--------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
.. . ....++.+|+++.+ ||.+.+++-|++++
T Consensus 326 ~~~~~~~~~~~~~~~~g~~~~liR~svGl----E~~~dl~~dl~~al 368 (369)
T cd00614 326 ASMTHSQLPPEERAAAGITPGLVRLSVGI----EDVEDLIADLEQAL 368 (369)
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 10 0 01125689999987 56666777766654
No 205
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=3.5e-24 Score=210.07 Aligned_cols=318 Identities=12% Similarity=0.117 Sum_probs=214.3
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSAS 155 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ 155 (457)
+|.+++||..|.. .+...|.+.+++.+.+... ..+. .....+|++.++++++.+ .+++++++++++..
T Consensus 28 ~~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~-~~Y~--------~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~ 97 (357)
T PRK14809 28 DPDDLVKLSSNEN-PHGPSPAAVEAIREAAERV-HSYP--------KASHADLTAALADRWDVSPEQVWLANGGDGALDY 97 (357)
T ss_pred CccceeEecCCCC-CCCCCHHHHHHHHHHHhhh-hcCC--------CCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHH
Confidence 4678999998743 3344688888888776542 1111 112467888999988744 34555556689999
Q ss_pred HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC---CHH-HHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447 156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN---NMQ-HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA 231 (457)
Q Consensus 156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~---d~~-~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G 231 (457)
++.+++++||.|++..++|..........|..+..++.. +.+ ++++..+.. .+++++++.+++||||
T Consensus 98 ~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~---------~~~k~i~l~~p~NPTG 168 (357)
T PRK14809 98 LARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY---------DGERIVYLTSPHNPTG 168 (357)
T ss_pred HHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh---------cCCcEEEEeCCCCCCC
Confidence 999999999999999998877666677778777765532 111 122222221 1235677779999999
Q ss_pred CCCChHHHHHHHHHc--CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHH
Q psy15447 232 DICPLKDILSLRSKY--QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEH 306 (457)
Q Consensus 232 ~i~~l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~ 306 (457)
.+.+.+++.++++.. ++++|+||+|+..... +. ..... ...+..++++||||.+|.+| ||+++++++++.
T Consensus 169 ~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~--~~-~~~~~--~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~ 243 (357)
T PRK14809 169 SEIPLDEVEALAERTDEETLVVVDEAYGEFAER--PS-AVALV--EERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADA 243 (357)
T ss_pred cCCCHHHHHHHHHhCccCcEEEEechhhhccCC--ch-hHHHH--hhCCCEEEEecchhHhcCcchhheeeecCHHHHHH
Confidence 999988777777654 7899999999754322 11 11111 11222488999999998766 999999999988
Q ss_pred HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch
Q psy15447 307 HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE 386 (457)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 386 (457)
+...... + +.+++.+.++.+++..-+..++.++.++++.+.+.+.|+. .. .++.+.++++.+.+
T Consensus 244 ~~~~~~~--~--~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~~----~~~~g~f~~~~~~~---- 307 (357)
T PRK14809 244 YARVNTP--F--AASELACRAGLAALDDDEHVERTVETARWAREYIREELDA----PT----WESAGNFVLAEVGD---- 307 (357)
T ss_pred HHHhCCC--C--CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcC----cc----CCCCCCEEEEECCC----
Confidence 8754322 2 3466766777666632111123455666677777777755 22 14567888887642
Q ss_pred HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 387 VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 387 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
..++++.|.++||.+.++..+ ...+++|+++. +++++++++++|+++++
T Consensus 308 ------~~~~~~~l~~~gv~v~~g~~f-----~~~~~iRls~~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 308 ------ASAVAEAAQERGVIVRDCTSF-----GLPECIRITCG---TREETERAVEVLNEVLA 356 (357)
T ss_pred ------HHHHHHHHHHCCEEEEECccC-----CCCCeEEEecC---CHHHHHHHHHHHHHHhc
Confidence 236888888999999987643 23579999975 58999999999988764
No 206
>PRK09265 aminotransferase AlaT; Validated
Probab=99.94 E-value=3.4e-24 Score=213.62 Aligned_cols=341 Identities=14% Similarity=0.100 Sum_probs=219.1
Q ss_pred CCeeeEEeecCCc--cCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc------C--CCcEEEec
Q psy15447 78 NGIPCINFATHNY--LSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM------G--LEETALYS 147 (457)
Q Consensus 78 ~G~~~id~~s~~~--l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g--~~~~i~~~ 147 (457)
.|+.++||..++. +++...+++.+++.+.+... .. +....|. .+|++.+|+++ + .+.+++++
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~-~~---Y~~~~G~----~~lr~~ia~~~~~~~~~~~~~~~i~~t~ 102 (404)
T PRK09265 31 EGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPTA-QG---YSDSKGL----FSARKAIMQYYQQKGIPDVDVDDIYIGN 102 (404)
T ss_pred cCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcC-CC---CCCCCCc----HHHHHHHHHHHhccCCCCCCcccEEEeC
Confidence 4678899987544 34445677888887766431 11 1122233 45666666655 3 23445555
Q ss_pred ccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEE
Q psy15447 148 FGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKF 220 (457)
Q Consensus 148 sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~ 220 (457)
++++++..++.+++++||.|++..++|..+...+...|..+..++. .|++++++.+. .++++
T Consensus 103 G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-----------~~~~~ 171 (404)
T PRK09265 103 GVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKIT-----------PRTKA 171 (404)
T ss_pred ChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhcc-----------ccceE
Confidence 5567888899999999999999999999888888888877765532 25677777663 23567
Q ss_pred EEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---
Q psy15447 221 IIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG--- 294 (457)
Q Consensus 221 vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g--- 294 (457)
+++.+++||+|.+.+ +++|.++|++||+++|+||+|+...+... .........++...|+++||||.+|.+|
T Consensus 172 v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRi 249 (404)
T PRK09265 172 IVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGA--VHISIASLAPDLLCVTFNGLSKAYRVAGFRV 249 (404)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCC--CcCCHHHcCCCceEEEEecchhhccCcccce
Confidence 777788999999999 88999999999999999999875443221 1111111222223478899999997665
Q ss_pred cEEEe--cHH----HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHH---HHHHHHHHHHHHHHhhcccccCCe
Q psy15447 295 GFCVG--SSY----IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSL---LTKLREKCNTMHSLLSQHKVTQRF 365 (457)
Q Consensus 295 G~v~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~---~~~l~~~~~~l~~~L~~~~~~~~~ 365 (457)
||++. ++. +++.+..... ..+ +.+.+...++.+++...+...+. .+++.++.+.+.+.|++ .+++
T Consensus 250 G~~v~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~---~~~~ 323 (404)
T PRK09265 250 GWMVLSGPKKHAKGYIEGLDMLAS-MRL--CANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNA---IPGV 323 (404)
T ss_pred EEEEEeCchHHHHHHHHHHHHHhc-ccc--CCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhc---CCCC
Confidence 99885 443 3333322111 111 23445555555555311111111 23566778888888877 4577
Q ss_pred EEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447 366 LVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLC 445 (457)
Q Consensus 366 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 445 (457)
.+..+..+.++|+.++...... ......+.+.|.++||.+.++..+. ....+++|+++. .++++++++++.|+
T Consensus 324 ~~~~p~~g~~l~~~~~~~~~~~--~~~~~~~~~~l~~~gv~v~pg~~F~---~~~~~~~Ri~~~--~~~e~l~~~l~rl~ 396 (404)
T PRK09265 324 SCVKPKGALYAFPKLDPKVYPI--HDDEQFVLDLLLQEKVLLVQGTGFN---WPEPDHFRIVTL--PRVDDLEEAIGRIG 396 (404)
T ss_pred cccCCCcceEEEEEecccccCC--CCHHHHHHHHHHhCCEEEECchhhC---CCCCCeEEEEeC--CCHHHHHHHHHHHH
Confidence 7665666788888776421000 0023346677888999998876431 123579999994 58999999999999
Q ss_pred HHHHHhc
Q psy15447 446 KSHDIAV 452 (457)
Q Consensus 446 ~~~~~~~ 452 (457)
++++...
T Consensus 397 ~~l~~~~ 403 (404)
T PRK09265 397 RFLSGYR 403 (404)
T ss_pred HHHHHhc
Confidence 9887544
No 207
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.94 E-value=2.2e-24 Score=208.95 Aligned_cols=303 Identities=13% Similarity=0.082 Sum_probs=210.7
Q ss_pred eeeEEeecC-CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHH
Q psy15447 80 IPCINFATH-NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIA 158 (457)
Q Consensus 80 ~~~id~~s~-~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~ 158 (457)
.+++|+++| ++++... +.+.+ ..+.+|.. + ..+|++.+++++|.+.+++++++.+++..+.
T Consensus 20 ~~~i~l~~ne~p~~~~~-~~~~~---~~~~~yp~---------~----~~~Lr~~ia~~~~~~~I~it~Gs~~al~~~~- 81 (330)
T PRK05664 20 ADWLDLSTGIAPWPWPV-PAIPA---DAWARLPE---------T----DDGLEAAARAYYGAPQLLPVAGSQAAIQALP- 81 (330)
T ss_pred HHheeecCCcCCCCCCC-cccCH---HHHHhCCC---------C----hHHHHHHHHHHhCCCCEEECcCHHHHHHHHH-
Confidence 467999998 6666652 23322 23344321 1 1688999999999987776776678877664
Q ss_pred hhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---
Q psy15447 159 AYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP--- 235 (457)
Q Consensus 159 a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~--- 235 (457)
.+.+||.|++..++|..+...++..|.++..++. +++++.++ +.+++++.+++||||.+.+
T Consensus 82 -~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~---~~~~~~~~------------~~~~v~l~nP~NPTG~~~s~~~ 145 (330)
T PRK05664 82 -RLRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDE---AEVEAALD------------SLDVLVVVNPNNPTGRRFDPAR 145 (330)
T ss_pred -HccCCCEEEEcCCChHHHHHHHHHcCCeEEEech---hhHhhhhc------------CCCEEEEeCCcCCCCCccCHHH
Confidence 3579999999999999999999999999988864 34554442 1235555567899999998
Q ss_pred hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCC
Q psy15447 236 LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGS 312 (457)
Q Consensus 236 l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~ 312 (457)
+.+|.++|+++|+++|+||+|.... + ...+.. ..+.+..++++||||++|.+| ||+++++++++.+.....
T Consensus 146 l~~l~~~~~~~~~~iI~DE~y~~~~--~-~~s~~~---~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~~~~~ 219 (330)
T PRK05664 146 LLAWHARLAARGGWLVVDEAFMDNT--P-QHSLAA---CAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLG 219 (330)
T ss_pred HHHHHHHHHhcCCEEEEECCcccCC--C-cccccc---cccCCCEEEEeeccccccCCCcceEEEEeCHHHHHHHHHhcC
Confidence 5566677789999999999986332 1 111211 212222488999999999777 999999999998875533
Q ss_pred cceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHH
Q psy15447 313 GYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKL 392 (457)
Q Consensus 313 ~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 392 (457)
.+ +.+....+++.++|+........+++++++.+++.+.|++ .++... .+.+.++++.++ .
T Consensus 220 ~~----~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~-~~~~~f~~~~~~----------~ 280 (330)
T PRK05664 220 PW----TVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRR----HGLTPA-GGCALFQWVRTE----------D 280 (330)
T ss_pred CC----CCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH----CCCccc-CCcceEEEEecC----------C
Confidence 22 2355555666666643322234677888889999999988 454321 122245555543 2
Q ss_pred HHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 393 LQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 393 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
..++.+.|.++||.++... ..+++||+++. ++++++++.++|+++.+++
T Consensus 281 ~~~~~~~l~~~gi~v~~f~--------~~~~iRis~~~--~~~~~~~l~~al~~~~~~~ 329 (330)
T PRK05664 281 AAALHEFLARRGILTRLFE--------QPASLRFGLPA--DEADWARLDQALLAYRKEA 329 (330)
T ss_pred HHHHHHHHHHCCeEEEECC--------CCCeEEEECCC--CHHHHHHHHHHHHHHHhhc
Confidence 3578889999999997532 24799999874 6889999999999887654
No 208
>PRK06855 aminotransferase; Validated
Probab=99.94 E-value=5.3e-24 Score=213.47 Aligned_cols=348 Identities=10% Similarity=0.039 Sum_probs=219.2
Q ss_pred CeeeEEeecCCcc--CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHH
Q psy15447 79 GIPCINFATHNYL--SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFST 152 (457)
Q Consensus 79 G~~~id~~s~~~l--~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a 152 (457)
|++++++..+++. ++..++.+.+++.+.+.+-. ..++....|..++.+.+++.+.+..| .+++++++++.++
T Consensus 31 g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~--~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~a 108 (433)
T PRK06855 31 GVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDK--SYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDA 108 (433)
T ss_pred cccccccccCCCcccCCCCCHHHHHHHHHHhhcCC--CCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHH
Confidence 5667777554442 45556778888888775421 11222234555666666666655444 2345666666788
Q ss_pred HHHHHHhhcCCCCEEEEeCcccHHHHHHH-HhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEe
Q psy15447 153 SASAIAAYVKRNDAVFVDENINFAIQTGL-IASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVE 224 (457)
Q Consensus 153 ~~~ai~a~~~~gd~v~~~~~~h~~~~~~~-~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e 224 (457)
+..++. ++.+||.|++..++|..+.... ...|.+++.++. .|++++++.+++. ++++++++.
T Consensus 109 l~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~---------~~~~~i~l~ 178 (433)
T PRK06855 109 IAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYN---------PSIAGILLI 178 (433)
T ss_pred HHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcC---------CCceEEEEE
Confidence 887774 7899999999999988755432 334666655432 2789998888642 234666666
Q ss_pred cCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEE
Q psy15447 225 GVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCV 298 (457)
Q Consensus 225 ~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~ 298 (457)
+++||||.+.+ +++|.++|++||+++|+||+|+...+.. ........+.++...|+++||||.++.+| ||++
T Consensus 179 ~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~--~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii 256 (433)
T PRK06855 179 NPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNG--KKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIE 256 (433)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC--CCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEE
Confidence 78999999998 6688888999999999999997654422 11111122223323489999999997655 9998
Q ss_pred ec-----H---HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH--h-hCcHHHHHHHHHHHHHHHHhhcccccCCeEE
Q psy15447 299 GS-----S---YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL--K-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLV 367 (457)
Q Consensus 299 ~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~--~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~ 367 (457)
++ + .+++.+..... ... +.+.+...++.+.++.- + ..++.++.++++.+.+.+.|++ .+++.+
T Consensus 257 ~p~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~---~~~~~~ 330 (433)
T PRK06855 257 VYNADKDEVFKKYINSILNAKM-IEV--CSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKD---VPGLKV 330 (433)
T ss_pred EeCCchhhHHHHHHHHHHHhhc-ccc--CCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc---CCCeec
Confidence 62 2 23333322211 111 23555556555555311 1 1124567788888889898877 457766
Q ss_pred eccCCCCeEEEEecCCc---------ch-HHHH----------HHHHHHHHH-HHHcCeeEeccccCccccCCCCCeEEE
Q psy15447 368 QGHRDTPLKYLYLQKSD---------DE-VASK----------KLLQTICDM-CIQAGFAITCPSHLDQEAKKQKPSIRI 426 (457)
Q Consensus 368 ~~~~~~~~~~i~~~~~~---------~~-~~~~----------~~~~~~~~~-l~~~Gi~v~~~~~~~~~~~~~~~~lRi 426 (457)
..+.++.++|+.++... .. +... ....+++.. +.++||.+.|+..+. ...+.+||
T Consensus 331 ~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~----~~~~~~Rl 406 (433)
T PRK06855 331 NRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFC----TELNGFRV 406 (433)
T ss_pred cCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCC----CCCCceEE
Confidence 54556778888876421 00 0000 012345544 556799999886532 22356999
Q ss_pred EecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 427 TCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 427 ~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+++. .++++|++.++.|.+++++.
T Consensus 407 s~~~-~~~~~i~~~~~~l~~~~~~~ 430 (433)
T PRK06855 407 TLLE-RDEEKFEWIYQTLAEKIEEY 430 (433)
T ss_pred EECC-CcHHHHHHHHHHHHHHHHHH
Confidence 9976 58999999999999988754
No 209
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=5.2e-24 Score=209.85 Aligned_cols=322 Identities=11% Similarity=0.073 Sum_probs=221.1
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASA 156 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~a 156 (457)
+..++||+.|... +...+.+.+++.+...... . |+.... .+|++.+++++|.+ +.++++++++++..+
T Consensus 35 ~~~~i~l~~~~~~-~~~~~~~~~al~~~~~~~~-~-------Y~~~~g-~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~ 104 (371)
T PRK05166 35 VPRIAKLGSNENP-LGPSPAVRRAFADIAELLR-L-------YPDPQG-RALREAIAARTGVPADRIILGNGSEDLIAVI 104 (371)
T ss_pred CcceEEcCCCCCC-CCCCHHHHHHHHHHHHHhh-c-------CCCCcH-HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHH
Confidence 4578999987432 3456788888876544321 1 111111 37889999998854 344455556788888
Q ss_pred HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447 157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA 231 (457)
Q Consensus 157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G 231 (457)
+.+++++||.|++..+.|......++..|.++..++.. |++++++.+.+ .++++++.+++||+|
T Consensus 105 ~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~-----------~~~~v~l~~p~NPtG 173 (371)
T PRK05166 105 CRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVAR-----------APRMLMFSNPSNPVG 173 (371)
T ss_pred HHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhhc-----------CCCEEEEeCCCCCCC
Confidence 88899999999999999998888888889888877653 57888777643 335777899999999
Q ss_pred CCCChHHHHHHHHH--cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEE-ecHHHHH
Q psy15447 232 DICPLKDILSLRSK--YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCV-GSSYIIE 305 (457)
Q Consensus 232 ~i~~l~~i~~l~~~--~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~-~~~~~~~ 305 (457)
.+.+.+++.++++. +++++|+||+|.....+...........- .....|+++||||.+|.+| ||++ .++++++
T Consensus 174 ~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~ 252 (371)
T PRK05166 174 SWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKA-RGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVG 252 (371)
T ss_pred CCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhh-cCCCEEEEeechHhhhcchhheeeeecCCHHHHH
Confidence 99998777776653 48899999998755433211111111110 1112488999999998666 9966 4788888
Q ss_pred HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc
Q psy15447 306 HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD 385 (457)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 385 (457)
.+...... + +.+.+...++.+++..-...++.++.++++.+++.+.|++ .|+.+. ++.+.++|+.+..
T Consensus 253 ~~~~~~~~--~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~~~~-p~~g~fl~~~~~~--- 320 (371)
T PRK05166 253 LLDRVRTP--F--NVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAE----MGYRIA-PSRANFLFFDARR--- 320 (371)
T ss_pred HHHHhccC--C--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CcCeeC-CCcCCEEEEeCCC---
Confidence 77643321 2 2356665566665532211233556777788889999988 466653 5567788777543
Q ss_pred hHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 386 EVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 386 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
...++++.|.++||.+.++.. +...+++||+++ +.++.+++.++|++++
T Consensus 321 ------~~~~l~~~l~~~gi~v~p~~~-----~~~~~~iRi~~~---~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 321 ------PASAVAEALLRQGVIVKPWKQ-----PGFETFIRVSIG---SPEENDHFVAALDKVL 369 (371)
T ss_pred ------CHHHHHHHHHHCCeEEecCCC-----CCCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 235788999999999988653 233689999996 6888999999998764
No 210
>PRK07337 aminotransferase; Validated
Probab=99.94 E-value=6.1e-24 Score=210.77 Aligned_cols=338 Identities=12% Similarity=0.097 Sum_probs=221.1
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccHHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGFSTSA 154 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~~ 154 (457)
|..+++|..+.. .+...|.+.+++.+.+...... +....|..++...+++.+.+..|. +++++++++++|+.
T Consensus 29 ~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~---Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~ 104 (388)
T PRK07337 29 GRDIIHMGIGEP-DFTAPEPVVEAAARALRRGVTQ---YTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALL 104 (388)
T ss_pred CCCEEEeCCcCC-CCCCCHHHHHHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHH
Confidence 345788877654 3434578888888877642111 111223334444444444333342 45667777789999
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY 227 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~ 227 (457)
.++.+++++||.|++..++|......+...|.++..++.+ |++++++.+. +++++|++.+++
T Consensus 105 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-----------~~~~~v~l~~p~ 173 (388)
T PRK07337 105 LACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWG-----------ERTRGVLLASPS 173 (388)
T ss_pred HHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcC-----------ccceEEEEECCC
Confidence 8999999999999999999999888888888888777642 4666766553 245677778889
Q ss_pred CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecH
Q psy15447 228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSS 301 (457)
Q Consensus 228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~ 301 (457)
||+|.+.+ +++|.++|++||+++|+||+|....+....... .... ++ .|+++||||.+|.+| ||+++++
T Consensus 174 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~---~~~~-~~-vi~~~S~SK~~~~~G~RiG~~~~~~ 248 (388)
T PRK07337 174 NPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSA---LSLG-DD-VITINSFSKYFNMTGWRLGWLVVPE 248 (388)
T ss_pred CCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcCh---hhcc-CC-EEEEEechhhcCCchhheeeeecCH
Confidence 99999988 678889999999999999998643332211111 1121 22 367899999997655 9999999
Q ss_pred HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH--HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEE-eccCCCCeEEE
Q psy15447 302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHL--LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLV-QGHRDTPLKYL 378 (457)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~--~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~i 378 (457)
++++.+......+.. +.+.+...++.+.++. +....+.++.++++.+++.+.|++ .++.+ ..+.++.++|+
T Consensus 249 ~l~~~l~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~----~~~~~~~~p~~g~f~~~ 322 (388)
T PRK07337 249 ALVGTFEKLAQNLFI--CASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALES----LGFKVPVMPDGAFYVYA 322 (388)
T ss_pred HHHHHHHHHHHHhcc--CCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHh----cCCccccCCCeeEEEEE
Confidence 888887654322222 2345555555555431 111234567788888899999988 45543 23456788888
Q ss_pred EecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 379 YLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
.++..... ......+++++++ ++||.+.++..+.. ....+++|++++. +++++++.++.|.+++
T Consensus 323 ~~~~~~~~--~~~~~~~~~~~ll~~~gv~v~pg~~f~~--~~~~~~~Ri~~~~--~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 323 DCRGVAHP--AAGDSAALTQAMLHDAGVVLVPGRDFGP--HAPRDYIRLSYAT--SMSRLEEAVARLGKLF 387 (388)
T ss_pred ecccccCC--CCCCHHHHHHHHHHhCCEEEeCchhhCC--CCCCCEEEEEecC--CHHHHHHHHHHHHHHh
Confidence 87631000 0002356777754 67999988764321 1235799999985 6889999998887754
No 211
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.94 E-value=1e-23 Score=195.09 Aligned_cols=329 Identities=15% Similarity=0.144 Sum_probs=240.8
Q ss_pred CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC---CcEEEec-ccHHHHHHHHHhhcCCCCEE
Q psy15447 92 SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL---EETALYS-FGFSTSASAIAAYVKRNDAV 167 (457)
Q Consensus 92 ~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~---~~~i~~~-sG~~a~~~ai~a~~~~gd~v 167 (457)
.+...|+|++|+.+.++. |+ .|++ +++.++..++.....+-.+. +..++++ +---++..+|++++++||.|
T Consensus 36 Df~~pp~i~~Al~~rvdh-Gv--fGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~~gd~V 110 (388)
T COG1168 36 DFPTPPEIIEALRERVDH-GV--FGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTKPGDGV 110 (388)
T ss_pred cCCCCHHHHHHHHHHHhc-CC--CCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCcCCCee
Confidence 445579999999999976 32 2232 44566777777777776552 2445555 55589999999999999999
Q ss_pred EEeCcccHHHHHHHHhcCCeEEEecCC--------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---h
Q psy15447 168 FVDENINFAIQTGLIASRCKVQYFKHN--------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---L 236 (457)
Q Consensus 168 ~~~~~~h~~~~~~~~~~g~~~~~~~~~--------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l 236 (457)
++..|.|......+...|.++...|.. |+++||+.+.+ ++++++++++++||+|.+-. |
T Consensus 111 vi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~----------~~vkl~iLCnPHNP~Grvwt~eeL 180 (388)
T COG1168 111 VIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVD----------ERVKLFILCNPHNPTGRVWTKEEL 180 (388)
T ss_pred EecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhc----------CCccEEEEeCCCCCCCccccHHHH
Confidence 999999999999999999888876532 89999999976 45679999999999999976 8
Q ss_pred HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCC--CccEEEecCcccccCcc---cE-EEecHHHHHHHHhh
Q psy15447 237 KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTE--EVDMIIGSLEHALGSVG---GF-CVGSSYIIEHHRLS 310 (457)
Q Consensus 237 ~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~--~~Di~~~s~sK~lg~~g---G~-v~~~~~~~~~~~~~ 310 (457)
.+|.+||.+||+++|.||+|+-.+++.+- ......+++. +..|.+.|-||+|..+| ++ ++.++++.+++...
T Consensus 181 ~~i~elc~kh~v~VISDEIHaDlv~~g~~--h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~ 258 (388)
T COG1168 181 RKIAELCLRHGVRVISDEIHADLVLGGHK--HIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKR 258 (388)
T ss_pred HHHHHHHHHcCCEEEeecccccccccCCC--ccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHH
Confidence 89999999999999999999876665321 2222223332 34477788899997654 44 56667664444222
Q ss_pred CCcceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHH
Q psy15447 311 GSGYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVAS 389 (457)
Q Consensus 311 ~~~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 389 (457)
.. .......+.++.-|..++.+.=+.. +++.+.++.|.+++.+.|.+. ++++.+..+.++.+.|+.+..-.-
T Consensus 259 l~-~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~--~P~v~v~~p~gTYL~WLD~r~l~l---- 331 (388)
T COG1168 259 LK-RNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKH--LPGVKVTEPQGTYLAWLDCRELGL---- 331 (388)
T ss_pred HH-HhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhh--CCCcEEecCCCceeeeeeccccCC----
Confidence 11 1233346888877777776543322 467889999999999999873 479999878888899998764320
Q ss_pred HHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 390 KKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 390 ~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
...++.+.|+++ +|.+.++..+. ..+.+.+|+.+. .+++-++++++.|+.+++..
T Consensus 332 --~d~~l~~~ll~~akVal~~G~~FG---~~g~gf~RlN~a--cpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 332 --DDSELAEFLLEEAKVALSPGSTFG---EEGSGFVRLNFA--CPRAILEEALERLKRALKKR 387 (388)
T ss_pred --ChHHHHHHHHHhhcEeccCCCccC---cCCCceEEEecC--CCHHHHHHHHHHHHHHHhcc
Confidence 224677888876 89888776543 244678998764 68999999999998877653
No 212
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.94 E-value=2.2e-24 Score=209.12 Aligned_cols=283 Identities=13% Similarity=0.080 Sum_probs=194.4
Q ss_pred HHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHH
Q psy15447 126 VHLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELL 203 (457)
Q Consensus 126 ~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l 203 (457)
...+|++.+|+++|.+ .+++++++++++..++. +.+++++|+. .++|..+...++..|.++..++.++.+...+.+
T Consensus 41 ~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~~~~~vv~~-~P~y~~y~~~~~~~G~~v~~vp~~~~~~~~~~l 118 (332)
T PRK06425 41 SYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YINVGNIIIV-EPNFNEYKGYAFTHGIRISALPFNLINNNPEIL 118 (332)
T ss_pred CHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-HhCCCcEEEe-CCChHHHHHHHHHcCCeEEEEeCCcccCcHHHH
Confidence 4689999999999965 33444555578887776 4677765555 789999999999999999988764321112333
Q ss_pred HhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCcc
Q psy15447 204 RQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVD 280 (457)
Q Consensus 204 ~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~D 280 (457)
++ .+++++++.+++||||.+.+ +.+|.++|++||+++|+||+|....... ........+- .+..
T Consensus 119 ~~----------~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~-~~~~~~~~~~--~~~v 185 (332)
T PRK06425 119 NN----------YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNR-AEEDVLLNRS--YGNV 185 (332)
T ss_pred hh----------cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhcccccc-chhHHHHhcc--CCCE
Confidence 32 13456667799999999998 5677888899999999999987543321 0111111111 1225
Q ss_pred EEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhh
Q psy15447 281 MIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLS 357 (457)
Q Consensus 281 i~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~ 357 (457)
|+++||||++|.+| ||+++++++++.+......+ +.+..++++ +.........+..++.++++.+++.+.|+
T Consensus 186 i~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~~~----~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 260 (332)
T PRK06425 186 IIGRSLTKILGIPSLRIGYIATDDYNMKISRKITEPW----SVCDPAIDF-IRSIDLDYVAKHSLDIMENERSYLINNLE 260 (332)
T ss_pred EEEeecHHhcCCchhhheeeecCHHHHHHHHHcCCCC----ccCHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999776 99999999999887543322 123333222 22222111112457788889999999998
Q ss_pred cccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHH
Q psy15447 358 QHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDM 437 (457)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi 437 (457)
+ .|+.+..++.+.++++.+++ ..++++.|+++||.++++..+. ..+.+++||++. +++++
T Consensus 261 ~----~g~~~~~~~~g~f~~~~~~~----------~~~~~~~l~~~gi~v~~~~~f~---~~~~~~iRis~~---~~~~~ 320 (332)
T PRK06425 261 A----MGFRAAGDPSANFITFMIPD----------AHDFYSYLLKNGILVRLLDDYE---CLGEQYIRIAIR---RRSFN 320 (332)
T ss_pred H----CCCEECCCCCceEEEEEcCC----------HHHHHHHHHHCCeEEEECCCCC---CCCCCEEEEEeC---CHHHH
Confidence 8 47766545567788887652 2468899999999998875421 122479999996 79999
Q ss_pred HHHHHHHHHHH
Q psy15447 438 NSLIETLCKSH 448 (457)
Q Consensus 438 ~~~~~~l~~~~ 448 (457)
++++++|++++
T Consensus 321 ~~l~~al~~~~ 331 (332)
T PRK06425 321 IKLVNALRNFL 331 (332)
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 213
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=6.3e-24 Score=208.09 Aligned_cols=322 Identities=12% Similarity=0.079 Sum_probs=218.1
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSAS 155 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ 155 (457)
++++++||+.|.. .++.++.+.+++.+.+.... . |.. ....+|++.+|++++.+ ++++++++++++..
T Consensus 18 ~~~~~i~l~~~~~-~~~~p~~~~~a~~~~~~~~~-~-------y~~-~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~ 87 (356)
T PRK08056 18 SPDQLLDFSANIN-PLGMPVSLKRAIIDNLDCAE-R-------YPD-VEYRHLHQALARHHQVPASWILAGNGETESIFA 87 (356)
T ss_pred ChhhEEEeccccC-CCCCCHHHHHHHHHHHHhcc-c-------CcC-ccHHHHHHHHHHHhCcChhhEEECCCHHHHHHH
Confidence 5678999998743 24456889999988776532 1 111 12578999999998854 44555555678877
Q ss_pred HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHH-HHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447 156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQ-HLEELLRQQDERDTLNSKVTKKFIIVEGVYMN 229 (457)
Q Consensus 156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~-~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~ 229 (457)
++.++ .+|+. ++..+.+..+...++..|.++..++.. +++ ++.+.+. +++++|++.+++||
T Consensus 88 ~~~~l-~~g~v-iv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~-----------~~~k~v~l~~p~NP 154 (356)
T PRK08056 88 VVSGL-KPRRA-MIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLTDAILEALT-----------PDLDCLFLCTPNNP 154 (356)
T ss_pred HHHHh-CCCCE-EEeCCCcHHHHHHHHHcCCeEEEEecccccCCCccHHHHHhcc-----------CCCCEEEEeCCcCC
Confidence 77776 56775 445677777777788889988887642 122 2222221 34567778899999
Q ss_pred CCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEe-cHH
Q psy15447 230 SADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVG-SSY 302 (457)
Q Consensus 230 ~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~-~~~ 302 (457)
||.+.+ +++|.++|++||+++|+||+|....+. +......... .+.+++++||||++|.+| ||+++ ++.
T Consensus 155 TG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~--~~~~~~~~~~--~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~ 230 (356)
T PRK08056 155 TGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPD--ETGFIPQLAD--NPHLWVLRSLTKFYAIPGLRLGYLVNSDDA 230 (356)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCc--chHHHHHhcc--CCCEEEEEechhhccCcchhheeeecCCHH
Confidence 999998 788999999999999999998643322 1111111111 123688999999998665 99887 467
Q ss_pred HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecC
Q psy15447 303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQK 382 (457)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~ 382 (457)
+++.+...... .+.+.+...++.+.++.-....+.++.++++.+++.+.|++ ++++.+. ++.++++++.+..
T Consensus 231 ~~~~l~~~~~~----~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~---~~~~~~~-~~~~~~~~~~~~~ 302 (356)
T PRK08056 231 AVARMRRQQMP----WSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCA---LPLLTVW-PGRANYLFLRCER 302 (356)
T ss_pred HHHHHHHhCCC----CchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhc---CCCcEEc-CCCCcEEEEEcCC
Confidence 77777643322 23355555555555531111124567788889999999987 4566654 5567888887753
Q ss_pred CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 383 SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 383 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
+ ..++++.|+++||.++++..+. ....+++||++. ++++.++++++|+++++
T Consensus 303 ~---------~~~~~~~l~~~gI~v~~~~~f~---~~~~~~iRis~~---~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 303 P---------DIDLQRALLTQRILIRSCANYP---GLDSRYYRVAIR---SAAENERLLAALRNVLT 354 (356)
T ss_pred C---------hHHHHHHHHHCCeEEEECCCCC---CCCCCEEEEEEc---CHHHHHHHHHHHHHHHc
Confidence 2 2468899999999998775421 123469999986 78999999999988753
No 214
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.94 E-value=8.3e-24 Score=208.02 Aligned_cols=290 Identities=16% Similarity=0.188 Sum_probs=209.2
Q ss_pred hHHHHHHHHHHHhhcCCC----cEEEecccHHHHHHHHHhhcCCCCE-EEEeCcccHHH-HHHHHhcCCeEEEecC----
Q psy15447 124 NVVHLDLENDIASFMGLE----ETALYSFGFSTSASAIAAYVKRNDA-VFVDENINFAI-QTGLIASRCKVQYFKH---- 193 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~~ai~a~~~~gd~-v~~~~~~h~~~-~~~~~~~g~~~~~~~~---- 193 (457)
.+..+++++.+++++|.+ .+++++||++++..++.++..++|. |+....+|+.. ...++..|.++..++.
T Consensus 34 ~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~~~ 113 (363)
T TIGR02326 34 NIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTGEVE 113 (363)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCCCC
Confidence 556788899999999975 2566788899999999888777765 55566666664 3445667877776654
Q ss_pred -CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcccccc
Q psy15447 194 -NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYF 272 (457)
Q Consensus 194 -~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~ 272 (457)
.|++++++.+++. ...+++.+.++.+++|.+.|+++|.++|++||+++|+|+++++|... .
T Consensus 114 ~~d~~~l~~~l~~~---------~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~---------~ 175 (363)
T TIGR02326 114 PPDVVEVEAILAAD---------PAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIP---------I 175 (363)
T ss_pred CCCHHHHHHHHhhC---------CCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcc---------c
Confidence 2788999888752 23456777788889999999999999999999999999999876432 1
Q ss_pred CCCCCCccEEEecCcccc-cCcc-cEEEecHHHHHHHHhhCCc------------------ceecCCCcHHHHHHHHHHH
Q psy15447 273 GVSTEEVDMIIGSLEHAL-GSVG-GFCVGSSYIIEHHRLSGSG------------------YCFSASLPPFLAVAANKAL 332 (457)
Q Consensus 273 ~~~~~~~Di~~~s~sK~l-g~~g-G~v~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~aaa~a~l 332 (457)
++...++|++++|++|++ |+.| |+++.+++.++.+.....+ +.|+ .++....+..+++
T Consensus 176 ~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft--~~~~~~~al~~al 253 (363)
T TIGR02326 176 DIAELHIDYLISSANKCIQGVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFT--SPTHVVHAFAQAL 253 (363)
T ss_pred chhhcCccEEEecCccccccCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCC--CcHHHHHHHHHHH
Confidence 222235689999999998 5556 9999998877765321111 1233 3555666666777
Q ss_pred HHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC--CCCe-EEEEecCCcchHHHHHHHHHHHHHHHHcCee
Q psy15447 333 HLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR--DTPL-KYLYLQKSDDEVASKKLLQTICDMCIQAGFA 406 (457)
Q Consensus 333 ~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~--~~~~-~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~ 406 (457)
+.+.+. +++.++++++.+++++.|++ .|+.+..+. .+++ .++.+...... ...++.+.|.++||.
T Consensus 254 ~~l~~~g~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~L~~~gi~ 324 (363)
T TIGR02326 254 LELEKEGGVAARHQRYQQNQKTLVAGMRA----LGFEPLLDDEIQSPIITSFYSPEDPDY-----RFADFYQRLKEQGFV 324 (363)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHHHHH----cCCeeccCcccCCceEEEEECCCCCCC-----CHHHHHHHHHHCCEE
Confidence 665432 35778999999999999988 466654322 3443 45555542100 345788999999999
Q ss_pred EeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 407 ITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 407 v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
++++..+ ..+.+|+++...+|.+|+++++++|++++
T Consensus 325 v~~g~~~------~~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 325 IYPGKVS------QVDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred EECCcCC------CCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 9876531 24789999877789999999999998875
No 215
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=8.8e-24 Score=208.35 Aligned_cols=324 Identities=15% Similarity=0.150 Sum_probs=216.1
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC--------C--CcEEEeccc
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG--------L--EETALYSFG 149 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~--~~~i~~~sG 149 (457)
..++++.+|.+ .+...|.+.+++.+.+.. +.....+.. .| ..+|++.++++++ . +.+++++++
T Consensus 28 ~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~Y~~-~G----~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga 100 (374)
T PRK02610 28 IQLDRLDTNEF-PYDLPPDLKQKLAWLYQQ-GIESNRYPD-GG----HEALKQAIAEYVNESAAGSSQITPANISVGNGS 100 (374)
T ss_pred cceeEecCCCC-CCCCCHHHHHHHHHHHhh-cccccCCCC-Cc----hHHHHHHHHHHhCccccccCCCCHHHEEEcCCh
Confidence 45889988765 455568899999887765 110011111 23 3566677777665 2 234444555
Q ss_pred HHHHHHHHHhhcCCCC-EEEEeCcccHHHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447 150 FSTSASAIAAYVKRND-AVFVDENINFAIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFII 222 (457)
Q Consensus 150 ~~a~~~ai~a~~~~gd-~v~~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi 222 (457)
.+++..++.+++.+|| .|++..++|..+...++..|.++..++. .|++++++.+++.. ..++++|+
T Consensus 101 ~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~-------~~~~k~i~ 173 (374)
T PRK02610 101 DELIRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQ-------NPPVRVVF 173 (374)
T ss_pred HHHHHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhc-------CCCceEEE
Confidence 5788777777777775 8999999999999999999999887763 26788888876421 12456777
Q ss_pred EecCCCCCCCCCChHHHHHHHH-HcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEE
Q psy15447 223 VEGVYMNSADICPLKDILSLRS-KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCV 298 (457)
Q Consensus 223 ~e~v~~~~G~i~~l~~i~~l~~-~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~ 298 (457)
+.+++||||.+.+.+++.++.+ .+++++|+||+|..... . .......-. ++ .|+++||||++|.+| ||++
T Consensus 174 l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~-~---~~~~~~~~~-~~-~ivi~SfSK~~g~~GlRiG~~v 247 (374)
T PRK02610 174 VVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQ-T---TLVGELAQH-PN-WVILRTFSKAFRLAAHRVGYAI 247 (374)
T ss_pred EeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCc-c---chHHHHhcC-CC-EEEEEecchhccCcccceeeee
Confidence 7788999999999766655543 24899999999864321 1 111111111 12 378999999998766 9999
Q ss_pred ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE
Q psy15447 299 GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL 378 (457)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i 378 (457)
+++++++.+...... + +.+.+...++.++++..+...+.+.+..+..+.+.+.|++ ++++.+. ++.+.++|+
T Consensus 248 ~~~~l~~~l~~~~~~--~--~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~---~~~~~~~-p~~g~f~~~ 319 (374)
T PRK02610 248 GHPELIAVLEKVRLP--Y--NLPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQE---LPQLRVW-PSAANFLYL 319 (374)
T ss_pred cCHHHHHHHHHhcCC--C--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh---CCCcEeC-CCcceEEEE
Confidence 999999888654422 2 2355555555555543222112223334445667777766 4566653 567888888
Q ss_pred EecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 379 YLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
.++... ...++++.|.++||.+++. .+++||++. +.+++++++++|+++++.+
T Consensus 320 ~l~~~~-------~~~~~~~~l~~~gi~v~~~----------~~~lRls~~---~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 320 RLSQDA-------ALAALHQALKAQGTLVRHT----------GGGLRITIG---TPEENQRTLERLQAALTQL 372 (374)
T ss_pred eCCCCC-------CHHHHHHHHHHCCEEEEeC----------CCeEEEeCC---CHHHHHHHHHHHHHHHhhc
Confidence 876543 4567888899999998642 368999986 4678999999999887654
No 216
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.94 E-value=7.3e-24 Score=209.83 Aligned_cols=323 Identities=15% Similarity=0.136 Sum_probs=216.1
Q ss_pred ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHH---HHhhcCC---CcEEEecccHHHHHHHHHhhc-----CC-
Q psy15447 96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLEND---IASFMGL---EETALYSFGFSTSASAIAAYV-----KR- 163 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~---la~~~g~---~~~i~~~sG~~a~~~ai~a~~-----~~- 163 (457)
++.+.+++.+.++.+...+. +...++ ......+++. +++.++. +.+++++++++++..++.++. ++
T Consensus 12 ~~~v~~~~~~~~~~~~~n~~-~~~~~~-~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~ 89 (382)
T TIGR03403 12 DPKVKELMDPFFCDIYGNPN-SLHQFG-TATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGG 89 (382)
T ss_pred CHHHHHHHHHHHHhcCcCCc-cccHHH-HHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCC
Confidence 57899999998876433322 222222 1223334444 4444442 456677777889888887652 44
Q ss_pred CCEEEEeCcccHHHHHH---HHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC
Q psy15447 164 NDAVFVDENINFAIQTG---LIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP 235 (457)
Q Consensus 164 gd~v~~~~~~h~~~~~~---~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~ 235 (457)
++.|++....|++.... +...|.++..++.+ |++++++.+.. +++++++++++|++|.+.|
T Consensus 90 ~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~~-----------~t~lv~~~~~~n~tG~~~~ 158 (382)
T TIGR03403 90 KNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAITE-----------KTALVSVMWANNETGMIFP 158 (382)
T ss_pred CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhccc-----------CCeEEEEEcccCCCccccC
Confidence 46899888888776544 34568888877653 67778777642 4578889999999999999
Q ss_pred hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHH-HHHHh-h--
Q psy15447 236 LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYII-EHHRL-S-- 310 (457)
Q Consensus 236 l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~-~~~~~-~-- 310 (457)
+++|.++|++||+++++|++++.|... .++...++|+++.|++|.+|+.| |++..++... ..... .
T Consensus 159 ~~~I~~la~~~g~~~ivD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~G~g~l~vr~~~~~~p~~~g~~~ 229 (382)
T TIGR03403 159 IKEIGEICKERGVLFHTDAVQAIGKIP---------VDVQKAGVDFLSFSAHKFHGPKGVGGLYIRKGVELTPLFHGGEH 229 (382)
T ss_pred HHHHHHHHHHcCCEEEEechhhcCCCc---------cCccccCCCEEEEcchhhCCCCceEEEEECCCCCCCCcccCCCC
Confidence 999999999999999999998865331 12222456899999999888665 6665554321 00000 0
Q ss_pred CCcceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC---CCeEEEEecCCcch
Q psy15447 311 GSGYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD---TPLKYLYLQKSDDE 386 (457)
Q Consensus 311 ~~~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~ 386 (457)
...+ ..++.+.....++.++++...+. +...++++++.+++.+.|++ ++++.+..+.. .+++.+.+...
T Consensus 230 ~~~~-~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~---~~~~~~~~~~~~~~~~~~~~~~~~~--- 302 (382)
T TIGR03403 230 MGGR-RSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLE---LPDVFVVGDREHRVPNTILISIKGV--- 302 (382)
T ss_pred CCCc-ccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc---CCCEEEECCCCCCcCCEEEEEeCCC---
Confidence 0001 12345666665666677665442 34567888899999999987 57888875432 34556666542
Q ss_pred HHHHHHHHHHHHHHHHcCeeEeccccCccc----------cC----CCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 387 VASKKLLQTICDMCIQAGFAITCPSHLDQE----------AK----KQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 387 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~----------~~----~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
....+.+.|.++||.++.+..|... .. ...+.+|++++..+|++|||+++++|+++++.++
T Consensus 303 -----~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 303 -----EGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred -----CHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3446777788999999976544310 00 0135799999999999999999999999887764
No 217
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.94 E-value=3.9e-24 Score=213.39 Aligned_cols=338 Identities=12% Similarity=0.087 Sum_probs=212.5
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCC--CCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGV--GSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFST 152 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~--~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a 152 (457)
|..++|+..++. .+..+|.+.+++.+.+++... ...++....|..++.+.+++.+.+..| .+.+++++++.++
T Consensus 33 ~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~a 111 (409)
T PRK07590 33 EAKIIRLGIGDV-TQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCD 111 (409)
T ss_pred CCceEEecCcCC-CCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHH
Confidence 556889988754 344568889999988876321 111121223444444444444333223 2234444444567
Q ss_pred HHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCe-----------EEEecCCCHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447 153 SASAIAAYVKRNDAVFVDENINFAIQTGLIASRCK-----------VQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFI 221 (457)
Q Consensus 153 ~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~-----------~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~v 221 (457)
+... ..++.+||.|++..++|..+...++..|.+ +..++.+.-+.+..-+.+ .++++|
T Consensus 112 l~~l-~~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~----------~~~k~i 180 (409)
T PRK07590 112 TGNI-LDIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE----------EKVDII 180 (409)
T ss_pred HHHH-HHhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc----------cCceEE
Confidence 6654 456689999999999999988888888875 666654211111111111 245677
Q ss_pred EEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC-CCccEEEecCcccccCcc---
Q psy15447 222 IVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST-EEVDMIIGSLEHALGSVG--- 294 (457)
Q Consensus 222 i~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~-~~~Di~~~s~sK~lg~~g--- 294 (457)
++.+++||||.+.+ +++|.++|++||++||+||+|+...+... . ......++. .+..|+++||||++|.+|
T Consensus 181 ~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~-~-~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRi 258 (409)
T PRK07590 181 YLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPS-L-PHSIYEIEGARECAIEFRSFSKTAGFTGTRC 258 (409)
T ss_pred EEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCC-C-CcchhhCCCcccceEEEecCccccCCcCcee
Confidence 67788999999998 56888889999999999999975443221 1 011111211 123488999999998666
Q ss_pred cEEEecHHHHHHH-----------HhhCCcceecCCCcHHHHHHHHHHHHH--HhhCcHHHHHHHHHHHHHHHHhhcccc
Q psy15447 295 GFCVGSSYIIEHH-----------RLSGSGYCFSASLPPFLAVAANKALHL--LKANPSLLTKLREKCNTMHSLLSQHKV 361 (457)
Q Consensus 295 G~v~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~aaa~a~l~~--~~~~~~~~~~l~~~~~~l~~~L~~~~~ 361 (457)
||+++++++++.+ ........+. +.+.+...++.+++.. .....++++.++++.+.+.+.|++
T Consensus 259 G~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~--- 334 (409)
T PRK07590 259 AYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFN-GVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLES--- 334 (409)
T ss_pred EEEEcCHHHhhhccccchhhhHHHHHHHHhhccc-CcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 9999999888621 1111111121 2355555555555431 111124567788888999999988
Q ss_pred cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHH
Q psy15447 362 TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSL 440 (457)
Q Consensus 362 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~ 440 (457)
.++.+..+..+.++|+.++... ...++++.|++ +||.+.++..+. ....+++||++. .++++++++
T Consensus 335 -~~~~~~~~~g~~f~wi~~~~~~-------~~~~~~~~l~~~~gv~v~pg~~f~---~~~~~~iRi~~~--~~~~~l~~~ 401 (409)
T PRK07590 335 -AGFEVYGGVNAPYIWVKTPDGM-------SSWDFFDKLLQEANVVGTPGSGFG---PSGEGYFRLSAF--GSRENVLEA 401 (409)
T ss_pred -cCCceecCCcceEEEEECCCCC-------CHHHHHHHHHHHCCEEEeChhHhC---CCCCCEEEEEcc--CCHHHHHHH
Confidence 4666654456788899887643 34567777775 699998876431 123579999953 479999999
Q ss_pred HHHHHHH
Q psy15447 441 IETLCKS 447 (457)
Q Consensus 441 ~~~l~~~ 447 (457)
++.|.++
T Consensus 402 l~rl~~~ 408 (409)
T PRK07590 402 MERIKKA 408 (409)
T ss_pred HHHHHhh
Confidence 9998765
No 218
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.94 E-value=8.1e-24 Score=206.94 Aligned_cols=319 Identities=14% Similarity=0.132 Sum_probs=219.4
Q ss_pred eeeEEeecC-CccCCC-CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHH
Q psy15447 80 IPCINFATH-NYLSFV-ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAI 157 (457)
Q Consensus 80 ~~~id~~s~-~~l~~~-~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai 157 (457)
+++||.++. ..+|.+ .++++++++.+.++.| .+..+...++++++++++|.+.++++++|++|+..++
T Consensus 8 ~~~ina~g~~t~~g~s~~~~~v~~a~~~~~~~~----------~~~~~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~al 77 (363)
T TIGR01437 8 KKVINASGKMTILGVSTVSDEVADAQKRGAQNY----------FEIKELVNKTGEYIANLLGVEDAVIVSSASAGIAQSV 77 (363)
T ss_pred ceEEECCcEeecCCCCCCCHHHHHHHHHHHhcC----------CCHHHHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHHH
Confidence 567776653 334444 4688999999887653 1356888999999999999999999999999999999
Q ss_pred HhhcCCCC---------------EEEEeCcccHHH----HHHHHhcCCeEEEecC---CCHHHHHHHHHhhchhcccCCC
Q psy15447 158 AAYVKRND---------------AVFVDENINFAI----QTGLIASRCKVQYFKH---NNMQHLEELLRQQDERDTLNSK 215 (457)
Q Consensus 158 ~a~~~~gd---------------~v~~~~~~h~~~----~~~~~~~g~~~~~~~~---~d~~~le~~l~~~~~~~~~~~~ 215 (457)
.+++++|| .|+++.+.+..+ ...+.+.|+++++++. .|++++++.+.+
T Consensus 78 ~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~~~~d~~~le~ai~~---------- 147 (363)
T TIGR01437 78 AAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYANECSAEQLEAAITE---------- 147 (363)
T ss_pred HHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCCCCCCHHHHHHhcCh----------
Confidence 99999987 777776443322 3566778888877653 478999988853
Q ss_pred CccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcc
Q psy15447 216 VTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVG 294 (457)
Q Consensus 216 ~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~g 294 (457)
.+.++++++++.+++|.+.|+++|.++|++||+++|+|++|+... .... .+ +.|+++.|++|++ |..+
T Consensus 148 ~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~-----~~~~-~~-----g~D~~~~S~~K~l~gp~~ 216 (363)
T TIGR01437 148 KTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL-----QKYY-RL-----GADLVIYSGAKAIEGPTS 216 (363)
T ss_pred hceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch-----HHHH-Hc-----CCCEEEEeCCcccCCCce
Confidence 233345467767789999999999999999999999999987311 0000 11 3489999999988 4568
Q ss_pred cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCC
Q psy15447 295 GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDT 373 (457)
Q Consensus 295 G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~ 373 (457)
|+++++++.++.++....+............++..++++.+.+ ..+..+...++.+++.+.|++ ++|+.+..+...
T Consensus 217 G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~---i~g~~~~~~~~~ 293 (363)
T TIGR01437 217 GLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNT---LKGVSASIVQDE 293 (363)
T ss_pred EEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhc---CCCeEEEEecCC
Confidence 9999998888776432221100001111223444456665543 334555666677889999988 578776532111
Q ss_pred -----CeEEEEecC---CcchHHHHHHHHHHHHHHHHcC--eeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHH
Q psy15447 374 -----PLKYLYLQK---SDDEVASKKLLQTICDMCIQAG--FAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIET 443 (457)
Q Consensus 374 -----~~~~i~~~~---~~~~~~~~~~~~~~~~~l~~~G--i~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~ 443 (457)
....+.+.. .. ...++.+.|.++| |.+++. +...+.+|+.+.. .+++|++.++++
T Consensus 294 ~~~~~~~~~v~~~~~~~g~-------~~~~l~~~L~~~~~~I~~r~~-------~~~~~~~~l~~~~-~~~~e~~~~~~~ 358 (363)
T TIGR01437 294 AGRDIARAEIRFDESELGM-------TAADVVQALRQGEPAIYTRGY-------KANEGIIEIDPRS-VTGGQLDIIVER 358 (363)
T ss_pred CCCcCceEEEEEeccCCCC-------CHHHHHHHHhcCCCCEEEeee-------eecCCeEEEEeec-CCHHHHHHHHHH
Confidence 122233332 22 4568999998877 666542 2335789999875 679999999999
Q ss_pred HHHH
Q psy15447 444 LCKS 447 (457)
Q Consensus 444 l~~~ 447 (457)
|+++
T Consensus 359 l~~~ 362 (363)
T TIGR01437 359 IREI 362 (363)
T ss_pred HHHh
Confidence 9875
No 219
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=2.6e-24 Score=208.60 Aligned_cols=310 Identities=12% Similarity=0.088 Sum_probs=217.3
Q ss_pred ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC-----CCcEEEecccHH
Q psy15447 77 INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG-----LEETALYSFGFS 151 (457)
Q Consensus 77 ~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-----~~~~i~~~sG~~ 151 (457)
..|+..+|+..|.. .++.+|.+.+++.+.+..-..+. +. .....+|++.++++++ .+++++++++.+
T Consensus 16 ~~~~~~i~l~~~~~-~~~~p~~~~~~~~~~~~~~~~~~--Y~-----~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~ 87 (335)
T PRK14808 16 TEKRDRTYLALNEN-PFPFPEDLVDEVFRRLNSDTLRI--YY-----DSPDEELIEKILSYLDTDFLSKNNVSVGNGADE 87 (335)
T ss_pred CCCCceeEecCCCC-CCCCCHHHHHHHHHHhhhhhhhc--CC-----CCChHHHHHHHHHHhCCCCCCcceEEEcCCHHH
Confidence 36789999988754 45557889999888765311110 10 1125678888888877 234455555568
Q ss_pred HHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHH-HHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447 152 TSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHL-EELLRQQDERDTLNSKVTKKFIIVEGVYMNS 230 (457)
Q Consensus 152 a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~l-e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~ 230 (457)
++..++.++ |.|++..++|..+...++..|.++..++..+--.+ +..+ ..++++++.+++|||
T Consensus 88 ~i~~~~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~------------~~~~~i~i~nP~NPT 151 (335)
T PRK14808 88 IIYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNV------------GEGDVVFIPNPNNPT 151 (335)
T ss_pred HHHHHHHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCChhHc------------cCCCEEEEeCCCCCC
Confidence 888888877 56888999999999999999999988875321001 0111 124688899999999
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHH
Q psy15447 231 ADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHH 307 (457)
Q Consensus 231 G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~ 307 (457)
|.+.+.+++.+++ ++++++|+||+|.... +. .......- .++ .++++||||++|.+| ||+++++++++.+
T Consensus 152 G~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~-~~---~~~~~~~~-~~~-vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l 224 (335)
T PRK14808 152 GHVFEREEIERIL-KTGAFVALDEAYYEFH-GE---SYVDLLKK-YEN-LAVIRTFSKAFSLAAQRIGYVVSSEKFIDAY 224 (335)
T ss_pred CCCcCHHHHHHHH-hcCCEEEEECchhhhc-CC---chHHHHHh-CCC-EEEEEechhhccCcccceEEEEeCHHHHHHH
Confidence 9999999999999 5899999999987421 21 11111111 122 488999999999777 9999999999988
Q ss_pred HhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchH
Q psy15447 308 RLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEV 387 (457)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 387 (457)
...... + +.+.+...++.++++..+...+..+.++++.+++.+.|++ .|+.+. ++.++++++.++..
T Consensus 225 ~~~~~~--~--~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~~~~-~~~g~f~~~~l~~~---- 291 (335)
T PRK14808 225 NRVRLP--F--NVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALRE----MGYRIT-DSRGNFVFIFMEKE---- 291 (335)
T ss_pred HHhcCC--C--CCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH----CCCEEC-CCCCeEEEEeCCCc----
Confidence 654422 2 2355555666666653322233456777778888888988 577664 45788888888743
Q ss_pred HHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 388 ASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 388 ~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
...++.+.|.++||.++.. .+++||++. +.++.++++++|++.
T Consensus 292 ----~~~~~~~~l~~~Gi~V~~~----------~~~~Risi~---~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 292 ----EKERLLEHLRAKNIAVRSF----------REGVRITIG---KREENDMILKELEVF 334 (335)
T ss_pred ----cHHHHHHHHHHCCeEEEEC----------CCCeEEecC---CHHHHHHHHHHHHhh
Confidence 2357889999999999842 258999986 689999999998753
No 220
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.94 E-value=1.6e-23 Score=208.65 Aligned_cols=346 Identities=12% Similarity=0.057 Sum_probs=222.0
Q ss_pred ECCeeeEEeecCCcc---CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEeccc
Q psy15447 77 INGIPCINFATHNYL---SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFG 149 (457)
Q Consensus 77 ~~G~~~id~~s~~~l---~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG 149 (457)
.+|+.+|+|+-+++- .+...|.+.+++.+.++.-... .+....|..++.+.+++.+.+..| .+++++++++
T Consensus 29 ~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~--~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~ 106 (409)
T PLN00143 29 DDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFN--SYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGC 106 (409)
T ss_pred CCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCC--CCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecCh
Confidence 367899999877662 2555678889998888752111 111123455555555554444333 2355666666
Q ss_pred HHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447 150 FSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFII 222 (457)
Q Consensus 150 ~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi 222 (457)
++++..++.+++++||.|++..++|..+...+...|.++..++. .|+++++++++. +++.++
T Consensus 107 ~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----------~~~~~~ 175 (409)
T PLN00143 107 KHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADE-----------NTIAMV 175 (409)
T ss_pred HHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhccc-----------CCEEEE
Confidence 78999999999999999999999998888888888988877653 267888776642 345566
Q ss_pred EecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cE
Q psy15447 223 VEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GF 296 (457)
Q Consensus 223 ~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~ 296 (457)
+.+++||+|.+.+ +++|.++|++|++++|+||+|....++. ........+......|+++||||.++.+| ||
T Consensus 176 ~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~--~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~ 253 (409)
T PLN00143 176 IINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGS--KPFVPMGLFASIVPVITLGSISKRWMIPGWGLGW 253 (409)
T ss_pred EECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCC--CCCcchhhhcccCcEEEEccchhhcCCCccceEE
Confidence 6667999999998 6788899999999999999997654431 11110011111222488999999987665 99
Q ss_pred EEec--HHH------HHHHHhhCCcceecCCCcHHHHHHHHHHHHH--HhhCcHHHHHHHHHHHHHHHHhhcccccCCeE
Q psy15447 297 CVGS--SYI------IEHHRLSGSGYCFSASLPPFLAVAANKALHL--LKANPSLLTKLREKCNTMHSLLSQHKVTQRFL 366 (457)
Q Consensus 297 v~~~--~~~------~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~--~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~ 366 (457)
++++ +.+ ++.+........+ .+.+..+++.+.++. ....++.+++++++.+++.+.|++ +.+..
T Consensus 254 ~v~~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~---~~~~~ 327 (409)
T PLN00143 254 LVTCDPSGLLQICEIADSIKKALNPAPF---PPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKE---IPCIM 327 (409)
T ss_pred EEeeCchhhhhhHHHHHHHHHHHhccCC---CCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhc---CCCCC
Confidence 9883 333 2333222211111 244454555555531 011134567777788888888877 33332
Q ss_pred Ee-ccCCCCeEEEEecCCcchHHHHHHHHHHHH-HHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447 367 VQ-GHRDTPLKYLYLQKSDDEVASKKLLQTICD-MCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL 444 (457)
Q Consensus 367 ~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l 444 (457)
+. .+.++.++|+.++...... .....+++. .+.++||.+.++..+ ...+++||+++ .+++++++.++.|
T Consensus 328 ~~~~p~gg~f~w~~l~~~~~~~--~~~~~~~~~~ll~~~gV~v~pg~~f-----~~~~~iRi~~~--~~~~~l~~al~rl 398 (409)
T PLN00143 328 CPQKAEGAFFALVKLNLLLLED--IEDDMEFCLKLAKEESLIILPGVTV-----GLKNWLRITFA--VEQSSLEDGLGRL 398 (409)
T ss_pred CCCCCCeeEEEEEecchhhcCC--CCCHHHHHHHHHHhCCEEEeCcccc-----CCCCeEEEEEc--CCHHHHHHHHHHH
Confidence 22 2345778888875310000 001234554 446789999987643 33679999997 4689999999999
Q ss_pred HHHHHHhc
Q psy15447 445 CKSHDIAV 452 (457)
Q Consensus 445 ~~~~~~~~ 452 (457)
+++++...
T Consensus 399 ~~~l~~~~ 406 (409)
T PLN00143 399 KSFCGRHA 406 (409)
T ss_pred HHHHHHhc
Confidence 99887554
No 221
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.94 E-value=3e-24 Score=212.38 Aligned_cols=293 Identities=17% Similarity=0.234 Sum_probs=214.0
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHHH
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQHL 199 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~l 199 (457)
.+...+|++++|++.|.+.+++++||++|+..++.+++++||.|+++.+.|+.+.. .+...|.++..++..|++++
T Consensus 63 ~p~~~~Le~~iA~~~g~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l 142 (400)
T PRK06234 63 NPTSTEVENKLALLEGGEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEEV 142 (400)
T ss_pred CccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHHH
Confidence 45678999999999999999999999999999999999999999999988876554 34678999999999999999
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc--CcEEEEEcCcccccccCCCCccccccCCCCC
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY--QARIFVDESVSFGTLGSTGHGVTEYFGVSTE 277 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~ 277 (457)
++.+.+ ++++|++|+++||+|.+.|+++|.++|+++ |+++|+||+|+.+.++. . .+ .
T Consensus 143 ~~~i~~-----------~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~---~----l~---~ 201 (400)
T PRK06234 143 RNALKA-----------NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQR---P----LQ---L 201 (400)
T ss_pred HHHhcc-----------CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCC---c----hh---h
Confidence 988853 457999999999999999999999999997 99999999998664431 1 11 2
Q ss_pred CccEEEecCcccccCc----ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447 278 EVDMIIGSLEHALGSV----GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 278 ~~Di~~~s~sK~lg~~----gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~ 353 (457)
++||++.|++|.+++. ||++++++++++.++.......++..++|..++.++..++.+. .++++.++++.++.
T Consensus 202 g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~tl~---~r~~~~~~na~~~a 278 (400)
T PRK06234 202 GADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKTLQ---IRMEKHCKNAMKVA 278 (400)
T ss_pred CCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCcHH---HHHHHHHHHHHHHH
Confidence 4589999999999753 5999999998888765432334566789998888877765443 47788889999999
Q ss_pred HHhhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc------C
Q psy15447 354 SLLSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH------L 413 (457)
Q Consensus 354 ~~L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------~ 413 (457)
+.|++.+.+..+..++ ...+.++.+.++... ....+|.+.|.--++....+.. |
T Consensus 279 ~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~------~~~~~f~~~l~~~~~~~s~G~~~sl~~~p 352 (400)
T PRK06234 279 KFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGV------EEGKVVMNNVKLATLAVSLGDAETLIQHP 352 (400)
T ss_pred HHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcH------HHHHHHHHhCCcceEeccCCCCCceecCC
Confidence 9998844332222211 012567888876432 1456777777654544433221 1
Q ss_pred cc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 414 DQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 414 ~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
.. .....++.+|+++.+...++=++.+.++|+.
T Consensus 353 ~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~~ 397 (400)
T PRK06234 353 ASMTHSPYTAEERKEAGISDGLVRLSVGLEDVDDIIADLKQALDL 397 (400)
T ss_pred ccCCCCCCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 11 0112256899999876544444555555543
No 222
>PLN02672 methionine S-methyltransferase
Probab=99.94 E-value=1.4e-23 Score=223.03 Aligned_cols=344 Identities=12% Similarity=0.105 Sum_probs=230.5
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC----cEEEecccH-HH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE----ETALYSFGF-ST 152 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~----~~i~~~sG~-~a 152 (457)
+|..+|++..|.. .+..+|.+++++.+.+.+... .+|..+...++++.+++..|.+ +.+++++|+ ++
T Consensus 695 ~g~~vI~LsinE~-d~ppPp~V~eAi~eal~~~~~-------s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~el 766 (1082)
T PLN02672 695 QESSLIHMDVDES-FLPVPSAVKASIFESFVRQNI-------SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLAL 766 (1082)
T ss_pred CCCCEEEEeCCCC-CCCCCHHHHHHHHHHHhhcCC-------CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHH
Confidence 4778999988754 455678999999988765422 2245667889999999988753 246666666 56
Q ss_pred HHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEec
Q psy15447 153 SASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEG 225 (457)
Q Consensus 153 ~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~ 225 (457)
+..++.+++++||.|++..++|+.+...++..|.++..++.. |++.+++.++.. .+..++++.|
T Consensus 767 L~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~---------~~~~I~L~nP 837 (1082)
T PLN02672 767 FNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETV---------KKPWVYISGP 837 (1082)
T ss_pred HHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccC---------CCCEEEEECc
Confidence 667889999999999999999999999999999998887643 467788777431 1223444444
Q ss_pred CCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCC---ccc---cccC-CCCCCccEEEecCcccccCcc-
Q psy15447 226 VYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGH---GVT---EYFG-VSTEEVDMIIGSLEHALGSVG- 294 (457)
Q Consensus 226 v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~---~~~---~~~~-~~~~~~Di~~~s~sK~lg~~g- 294 (457)
.+||||.+.+ +++|.++|++||+++|+||+|+...+..... .+. ..+. ..+....|+++||||.++.+|
T Consensus 838 nhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGL 917 (1082)
T PLN02672 838 TINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGH 917 (1082)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHH
Confidence 4599999988 6788899999999999999997544432110 010 0111 001123488999999998766
Q ss_pred --cEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHH-----HHhhCcHHHHHHHHHHHHHHHHhhcccccCCeE
Q psy15447 295 --GFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALH-----LLKANPSLLTKLREKCNTMHSLLSQHKVTQRFL 366 (457)
Q Consensus 295 --G~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~-----~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~ 366 (457)
||++++ +++++.+..... .....+.+..+++++++.+. ..+...+.++.++++.+++.+.|++ .|+.
T Consensus 918 RIGylIap~~eLi~~l~~~~~-~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~----~Gi~ 992 (1082)
T PLN02672 918 EFGFLALNDSVLIDAFHSAPG-LSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEA----CGWD 992 (1082)
T ss_pred HheeEEeCCHHHHHHHHHhhh-hcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHH----CCCe
Confidence 999986 458887764321 11111112333333333221 1111224566788999999999998 5777
Q ss_pred EeccCCCCeEEEEecCCc------chHH----HHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447 367 VQGHRDTPLKYLYLQKSD------DEVA----SKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQ 435 (457)
Q Consensus 367 ~~~~~~~~~~~i~~~~~~------~~~~----~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e 435 (457)
+..+.++.++|+.+..-. +... ......+++++|+++ ||.+.++.++ ..++++||++. .+++
T Consensus 993 v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~F-----G~~g~~RIsfa--~~~e 1065 (1082)
T PLN02672 993 VLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWT-----GIPGYCRFSFA--LEDS 1065 (1082)
T ss_pred EecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCccc-----CCCCeEEEEec--CCHH
Confidence 765555666666542100 0000 001346799999876 9999987642 33679999997 3889
Q ss_pred HHHHHHHHHHHHHHH
Q psy15447 436 DMNSLIETLCKSHDI 450 (457)
Q Consensus 436 di~~~~~~l~~~~~~ 450 (457)
+++++++.|+++.+.
T Consensus 1066 ~LeeALerL~kf~~~ 1080 (1082)
T PLN02672 1066 EFDRALKAIARFKEL 1080 (1082)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999987654
No 223
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=2.7e-23 Score=203.31 Aligned_cols=320 Identities=15% Similarity=0.154 Sum_probs=215.7
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAI 157 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai 157 (457)
..++||+.+.. .++.++.+.+++.+.+.... . |... ...+|+++++++++.+ ++++++++++++..++
T Consensus 19 ~~~~~l~~~~~-~~~~p~~~~~a~~~~~~~~~-~-------Y~~~-~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~ 88 (354)
T PRK06358 19 NMILDFSANIN-PLGVPESLKQAITENLDKLV-E-------YPDP-DYLELRKRIASFEQLDLENVILGNGATELIFNIV 88 (354)
T ss_pred cceEEecCCCC-CCCCCHHHHHHHHHHHHhhh-c-------CCCc-cHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHH
Confidence 45799987632 22336889998888765421 1 1111 2468999999998754 4555556668888888
Q ss_pred HhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCC-----H-HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447 158 AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNN-----M-QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA 231 (457)
Q Consensus 158 ~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d-----~-~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G 231 (457)
.++ .+ +.|++..++|..+...++..|.++..++.++ + +++.+.+. .+++++++.+++||+|
T Consensus 89 ~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~-----------~~~~~v~~~~P~NPtG 155 (354)
T PRK06358 89 KVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAANEIVLEEIK-----------EEIDLVFLCNPNNPTG 155 (354)
T ss_pred HHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCccHHHHHhhc-----------cCCCEEEEeCCCCCCC
Confidence 876 44 5688899999888888888898888776431 2 22222221 2345666667799999
Q ss_pred CCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEe-cHHHH
Q psy15447 232 DICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVG-SSYII 304 (457)
Q Consensus 232 ~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~-~~~~~ 304 (457)
.+.+ +.+|.++|++||+++|+||+|....+........... +..+..|+++||||.+|.+| ||+++ ++.++
T Consensus 156 ~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~--~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~ 233 (354)
T PRK06358 156 QLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYL--ENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLA 233 (354)
T ss_pred CccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhc--cCCCCEEEEEechhhccCcchhheeeecCCHHHH
Confidence 9998 6788888999999999999997544432111111111 12223488999999998665 99987 46777
Q ss_pred HHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCc
Q psy15447 305 EHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD 384 (457)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 384 (457)
+.+...... + +.+.+...++.++++.-+...+.++.++++.+.+.+.|++ .+++.+. ++.++++++.+++.
T Consensus 234 ~~~~~~~~~--~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~---~~~~~~~-~~~g~f~~~~~~~~- 304 (354)
T PRK06358 234 EKLLQMREP--W--SINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSE---FKGIKVY-KPSVNFIFFKLEKP- 304 (354)
T ss_pred HHHHHhCCC--C--cchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhc---CCCcEEc-CCcceEEEEEcCch-
Confidence 777654322 2 3355555556555532111134567778888899999987 4566665 44567788776532
Q ss_pred chHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 385 DEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 385 ~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
.++++.|.++||.+.++..+. ....+++|+++. ++++.++++++|++++
T Consensus 305 ---------~~~~~~l~~~gI~v~~~~~f~---~~~~~~iRls~~---~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 305 ---------IDLRKELLKKGILIRSCSNYR---GLDENYYRVAVK---SREDNKKLLKALEVIL 353 (354)
T ss_pred ---------HHHHHHHHHCCeEEEECCCCC---CCCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 378899999999999876421 123478999985 7999999999998765
No 224
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=1.1e-23 Score=204.48 Aligned_cols=302 Identities=14% Similarity=0.135 Sum_probs=206.4
Q ss_pred eeeEEeecC-CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccH-HHHHH
Q psy15447 80 IPCINFATH-NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGF-STSAS 155 (457)
Q Consensus 80 ~~~id~~s~-~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~-~a~~~ 155 (457)
.+++||++| |+++.+. +.+.. ..+.+|. .+. .+|++.+++++|.. +.+++++|+ +++..
T Consensus 24 ~~~i~ls~Nenp~~~~~-~~~~~---~~~~~Yp------------~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~ 86 (339)
T PRK06959 24 DAWLDLSTGINPHGYPV-PPVPA---DAWRRLP------------EDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRA 86 (339)
T ss_pred hhhceeccCCCCCCCCC-CCCCH---HHHHhCC------------Cch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHH
Confidence 468999998 5555542 22211 2344431 122 78999999999964 345566555 66654
Q ss_pred HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC
Q psy15447 156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP 235 (457)
Q Consensus 156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~ 235 (457)
. ..++++|+ |++..++|..+...++..|.++..++.++ +. +. ...+++++.+++||||.+.+
T Consensus 87 l-~~~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~-~~----~~-----------~~~~~v~l~nPnNPTG~~~s 148 (339)
T PRK06959 87 L-PALLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA-DT----LP-----------AALTHLIVVNPNNPTAERLP 148 (339)
T ss_pred H-HHhcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc-hh----cc-----------ccCCEEEEeCCCCCCCCCCC
Confidence 4 45567887 77788999999999999999998886543 11 11 12246667777899999999
Q ss_pred hHHHHHH---HHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHh
Q psy15447 236 LKDILSL---RSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRL 309 (457)
Q Consensus 236 l~~i~~l---~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~ 309 (457)
.+++.++ |++++.++|+||+|...... ..+.... ..++ -|+++||||.+|.+| ||+++++++++.+..
T Consensus 149 ~~~l~~l~~~~~~~~~~vI~DEay~~~~~~---~s~~~~~--~~~~-vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l~~ 222 (339)
T PRK06959 149 AARLLRWHAQLAARGGTLIVDEAFADTLPA---ASLAAHT--DRPG-LVVLRSVGKFFGLAGVRAGFVLAAPALLAALRD 222 (339)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCccCCCc---ccchhcc--CCCC-EEEEecChhhcCCcchheEEEecCHHHHHHHHH
Confidence 6655554 56789999999998753321 1111111 1223 388999999998777 999999999999876
Q ss_pred hCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHH
Q psy15447 310 SGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVAS 389 (457)
Q Consensus 310 ~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 389 (457)
....+ +.+.++.+++.++++.-....+.+++++++++++.+.|++ .|+.+. +.+.++++.+.+
T Consensus 223 ~~~~~----~vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~~~~--~~~~f~~~~~~~------- 285 (339)
T PRK06959 223 ALGAW----TVSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRA----HGFAVH--ATPLFSWTDDPR------- 285 (339)
T ss_pred hcCCC----CCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCCcc--CcceEEEEeCCC-------
Confidence 54332 2356666666666643222234678888899999999988 466553 234555665432
Q ss_pred HHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 390 KKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 390 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
..++.+.|.++||+++... ..+++||+++ .+++|+++++++|+++.+.+.
T Consensus 286 ---~~~l~~~l~~~GI~vr~~~--------~~~~lRisi~--~~~~e~~~l~~al~~~~~~~~ 335 (339)
T PRK06959 286 ---AAALHAALARRGIWTRYFA--------PPPSVRFGLP--ADEAEWQRLEDALAECVPTLA 335 (339)
T ss_pred ---HHHHHHHHHhCCeEEEECC--------CCCeEEEECC--CCHHHHHHHHHHHHHHHHHHh
Confidence 3468899999999997532 2368999974 378899999999999887664
No 225
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.94 E-value=4e-24 Score=210.83 Aligned_cols=287 Identities=13% Similarity=0.150 Sum_probs=208.5
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHh----cCCeEEEecCCCHHHH
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIA----SRCKVQYFKHNNMQHL 199 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~----~g~~~~~~~~~d~~~l 199 (457)
.+...+|++++|+++|.+.+++++||+.|+..++.+++++||.|+++.+.|+.....+.. .+.++..++..|++++
T Consensus 60 ~pt~~~Le~~lA~l~G~~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~l 139 (386)
T PRK06767 60 NPTVKLFEERMAVLEGGEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEADI 139 (386)
T ss_pred CcchHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHHH
Confidence 455789999999999999999999999999999999999999999999988877655432 3556666667788888
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV 279 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~ 279 (457)
++.+++ ++++|++|+++||+|.+.|+++|.++|+++|+++|+|++|+.+..+. . +. .++
T Consensus 140 ~~~i~~-----------~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~---p------l~-~g~ 198 (386)
T PRK06767 140 ENKIRP-----------NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQR---P------LE-LGC 198 (386)
T ss_pred HHhhCc-----------CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCC---c------hh-cCC
Confidence 887742 45799999999999999999999999999999999999987544321 1 11 245
Q ss_pred cEEEecCcccccCc----ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Q psy15447 280 DMIIGSLEHALGSV----GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSL 355 (457)
Q Consensus 280 Di~~~s~sK~lg~~----gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~ 355 (457)
|+++.|++|.+++. ||+++++++.++.+..... ...++.++|+.+++++..++.+ +.++++.++++.++.+.
T Consensus 199 Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~-~~~g~~~~~~~a~l~~~~L~tl---~~r~~~~~~~a~~la~~ 274 (386)
T PRK06767 199 DAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMR-KDIGGIMAPFDAWLLLRGLKTL---AVRMDRHCDNAEKIVSF 274 (386)
T ss_pred cEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHH-HHhCCCCCHHHHHHHHcCCCcH---HHHHHHHHHHHHHHHHH
Confidence 89999999999653 6899999887766532211 1234456888777776665544 34678889999999999
Q ss_pred hhcccccCCeEEec-----------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc------Ccc---
Q psy15447 356 LSQHKVTQRFLVQG-----------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH------LDQ--- 415 (457)
Q Consensus 356 L~~~~~~~~~~~~~-----------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------~~~--- 415 (457)
|++ .+++..+. +..+.++.+.+++.. ....++.+.|...++.++.++. |..
T Consensus 275 L~~---~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~------~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~ 345 (386)
T PRK06767 275 LKN---HDAVEGVWYPEGELASRQMKRGGGVISFSIKGGK------EETQAFINDLHFITIAVSLGDTETLIQHPATMTH 345 (386)
T ss_pred HHc---CCCccEEECCCcHHHHHhCCCCCceEEEEEcCCH------HHHHHHHHhCCccEEecCCCCcCccccCCCcccc
Confidence 998 45554322 123568888876432 1566788888777776654432 211
Q ss_pred -c--------cCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 416 -E--------AKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 416 -~--------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
. ....++.+|+++.+.. .+.+++-|++++
T Consensus 346 ~~~~~~~~~~~gi~~~l~R~svGlE~----~~dl~~dl~~al 383 (386)
T PRK06767 346 AAIPAELRQEMGIYDNLIRLSVGLES----WEDIVSDLEQAL 383 (386)
T ss_pred ccCCHHHHHhcCCCCCeEEEEeccCC----HHHHHHHHHHHH
Confidence 0 0112568999998754 444444444444
No 226
>PRK05839 hypothetical protein; Provisional
Probab=99.94 E-value=1.7e-23 Score=206.31 Aligned_cols=329 Identities=14% Similarity=0.050 Sum_probs=211.6
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccHHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGFSTSA 154 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~~ 154 (457)
|+.++||+.+.+ .+...+.+.+++.+..... . .+....|..++.+.+++.+++..|. +.+++++++.+++.
T Consensus 23 ~~~~i~l~~~~p-~~~~~~~~~~a~~~~~~~~-~---~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~ 97 (374)
T PRK05839 23 EYKGLDLTIGEP-QFETPKFIQDALKNNAHLL-N---KYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLF 97 (374)
T ss_pred CCCeEEcCCCCC-CCCCCHHHHHHHHHHhhcc-C---CCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence 789999998754 3444577777777665431 1 1222345566777777777776662 23444555557777
Q ss_pred HHHHhhc--CCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCC-----HHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447 155 SAIAAYV--KRNDAVFVDENINFAIQTGLIASRCKVQYFKHNN-----MQHLEELLRQQDERDTLNSKVTKKFIIVEGVY 227 (457)
Q Consensus 155 ~ai~a~~--~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d-----~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~ 227 (457)
.++.+++ ++||.|+++.++|..+...+...|.++..++... ++..+..+ .+++++++.+++
T Consensus 98 ~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~~------------~~~k~v~i~nP~ 165 (374)
T PRK05839 98 NFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKEL------------QEVDLVILNSPN 165 (374)
T ss_pred HHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhhh------------ccccEEEEeCCC
Confidence 7777663 5899999999999999888899999988876531 11111111 134677777999
Q ss_pred CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCcccccc---CC-CCCCccEEEecCcccccCcc---cEE
Q psy15447 228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYF---GV-STEEVDMIIGSLEHALGSVG---GFC 297 (457)
Q Consensus 228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~---~~-~~~~~Di~~~s~sK~lg~~g---G~v 297 (457)
||||.+.+ +++|.++|++||+++|+||+|.....+.....+.... +. ..++ .|+++||||.+|.+| ||+
T Consensus 166 NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~-vi~~~SfSK~~~~~GlRiG~i 244 (374)
T PRK05839 166 NPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKN-VLVINSISKRSSAPGLRSGFI 244 (374)
T ss_pred CCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCc-EEEEeccccccCCccceeEEE
Confidence 99999988 6688888999999999999987532221111111110 01 1123 488999999987655 999
Q ss_pred EecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEE
Q psy15447 298 VGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKY 377 (457)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 377 (457)
++++++++.+........+ ..+.+...++.+++..-+..++.+++++++.+.+.+.|. +. .+.++.++|
T Consensus 245 i~~~~~~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~-------~~--~p~gg~fi~ 313 (374)
T PRK05839 245 AGDASILKKYKAYRTYLGC--ASPLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREILG-------IT--IPPATFYVW 313 (374)
T ss_pred ecCHHHHHHHHHHHhhcCC--CCChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhcC-------CC--CCCeeEEEE
Confidence 9999988887644321112 224444444444442111112345666666666665442 22 245677888
Q ss_pred EEecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 378 LYLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 378 i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
+.+++. .+++++|++ +||.+.++.++.. .....+++||+++ .++++++++++.|+++++
T Consensus 314 ~~~~~~----------~~~~~~l~~~~gi~v~pg~~f~~-~~~~~~~iRis~~--~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 314 LPVDND----------EEFTKKLYQNEGIKVLPGSFLGR-NGIGKGYVRIALV--YDTPKLEKALEIIKTYLE 373 (374)
T ss_pred EeCCCh----------HHHHHHHHHHCCEEEeCchhhCC-CCCCCCeEEEEec--CCHHHHHHHHHHHHHHhh
Confidence 877532 367888875 8999998754321 0112589999996 379999999999988764
No 227
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.93 E-value=3.4e-23 Score=204.24 Aligned_cols=314 Identities=19% Similarity=0.219 Sum_probs=226.8
Q ss_pred ChhhHHHHHHHHHhcCCCC-CC-CCCcccChHHHHHHHHHHHhhcCCCc---EEEecccHHHHHHHHHhh---cCCCCEE
Q psy15447 96 NPDIEKCAIDCIDKNGVGS-CG-PRGFYGTNVVHLDLENDIASFMGLEE---TALYSFGFSTSASAIAAY---VKRNDAV 167 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~-~~-~~~~~g~~~~~~~l~~~la~~~g~~~---~i~~~sG~~a~~~ai~a~---~~~gd~v 167 (457)
.+.+.+++.+.+.++...+ .+ +.......+...++++.+++++|.+. ++++++++.++..++..+ .++|+.|
T Consensus 12 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~v 91 (371)
T PF00266_consen 12 PKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPGDEV 91 (371)
T ss_dssp BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEE
T ss_pred CHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccccccccccc
Confidence 4679999999987653221 11 11111236677889999999999665 567778888999888888 7899999
Q ss_pred EEeCcccHHHHHH----HHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHH
Q psy15447 168 FVDENINFAIQTG----LIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKD 238 (457)
Q Consensus 168 ~~~~~~h~~~~~~----~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~ 238 (457)
++....|++.... .+..|.++..++. .|++++++.+. +++++|++.++.+.+|.+.|+++
T Consensus 92 l~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~-----------~~~~lv~~~~~~~~tG~~~pi~~ 160 (371)
T PF00266_consen 92 LVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALN-----------PDTRLVSISHVENSTGVRNPIEE 160 (371)
T ss_dssp EEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHH-----------TTESEEEEESBETTTTBBSSHHH
T ss_pred ccccccccccccccccccccchhhhccccccccchhhhhhhhhhhc-----------cccceEEeecccccccEEeeece
Confidence 9998888886632 2355777766653 37888888885 35679999999999999999999
Q ss_pred HHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhhCCcce--
Q psy15447 239 ILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLSGSGYC-- 315 (457)
Q Consensus 239 i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~~~~~~-- 315 (457)
|.++|+++|+++++|.++++|... .+++..++|++++|.+|.+|+.| |+++.+++.++.+++...++.
T Consensus 161 I~~~~~~~~~~~~vD~~~~~g~~~---------id~~~~~~D~~~~s~~Kl~gp~G~g~l~v~~~~~~~~~p~~~~~~~~ 231 (371)
T PF00266_consen 161 IAKLAHEYGALLVVDAAQSAGCVP---------IDLDELGADFLVFSSHKLGGPPGLGFLYVRPEAIERLRPAKPGGGYL 231 (371)
T ss_dssp HHHHHHHTTSEEEEE-TTTTTTSS-----------TTTTTESEEEEESTSTTSSSTEEEEEEEHHHHHHHHTSSSSSSTT
T ss_pred ehhhhhccCCceeEechhcccccc---------ccccccccceeeecccccCCCCchhhheehhhhhhcccccccccccc
Confidence 999999999999999999987652 33444567999999999335555 889999988888854322211
Q ss_pred ----------------e-cCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEecc----CC
Q psy15447 316 ----------------F-SASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH----RD 372 (457)
Q Consensus 316 ----------------~-~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~----~~ 372 (457)
| .++.+.....+...+++.+.+. +...++..++.+++++.|++ ++++.+.++ ..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~---~~~~~~~~~~~~~~~ 308 (371)
T PF00266_consen 232 DFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEE---LPGIEVLGPDDEPRR 308 (371)
T ss_dssp THHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTTEEESSSSCGGBG
T ss_pred ccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhc---CCceeEeeecccccc
Confidence 2 2245555566666778877433 45678888999999999988 677777442 33
Q ss_pred CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc---ccCCCCCeEEEEecCCCCHHHHHHH
Q psy15447 373 TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ---EAKKQKPSIRITCNISHTEQDMNSL 440 (457)
Q Consensus 373 ~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~---~~~~~~~~lRi~~~~~~t~edi~~~ 440 (457)
+.++.+.+... ....+.+.|.++||.++.+..+.. ......+.+|++++..+|++|||++
T Consensus 309 ~~i~~~~~~~~--------~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 309 PSIVSFNLPGS--------DADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp TTEEEEEETTS--------SHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred cceEEEeecCC--------CHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 67888877544 456899999999999988554320 0001137999999999999999985
No 228
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.93 E-value=4e-23 Score=206.70 Aligned_cols=351 Identities=12% Similarity=0.086 Sum_probs=233.0
Q ss_pred CCeeeEEeecCCc-cCCCCCh---hhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHH
Q psy15447 78 NGIPCINFATHNY-LSFVENP---DIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTS 153 (457)
Q Consensus 78 ~G~~~id~~s~~~-l~~~~~p---~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~ 153 (457)
.|..++++..+++ .++...+ .+.++..+++.. |.. .|+...-..+|+++++++++.+.++++++|++|+
T Consensus 34 ~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~-g~~------~Y~~~~g~~~Lreaia~~~~~~~vv~t~ggt~A~ 106 (460)
T PRK13238 34 AGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMR-GDE------AYAGSRSYYRLEDAVKDIFGYPYTIPTHQGRAAE 106 (460)
T ss_pred cCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHh-CCc------ccCCCCCHHHHHHHHHHHhCCCcEEECCCHHHHH
Confidence 4777888877654 2554322 578888877764 221 1233445688999999999999999999999999
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC---------------CCHHHHHHHHHhhchhcccCCCCcc
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH---------------NNMQHLEELLRQQDERDTLNSKVTK 218 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~---------------~d~~~le~~l~~~~~~~~~~~~~~~ 218 (457)
..++.+++++|| |++..+.+.++...+...|.+++.++. .|+++|++.+.+.. ++++
T Consensus 107 ~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~-------~~~t 178 (460)
T PRK13238 107 QILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVG-------AENV 178 (460)
T ss_pred HHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcC-------CCce
Confidence 999999999999 888888777777778888887775542 47889999887532 1467
Q ss_pred EEEEEecCCCCCC-CCCC---hHHHHHHHHHcCcEEEEEcCcccc-c-ccC------CCCccccccCCCCCCccEEEecC
Q psy15447 219 KFIIVEGVYMNSA-DICP---LKDILSLRSKYQARIFVDESVSFG-T-LGS------TGHGVTEYFGVSTEEVDMIIGSL 286 (457)
Q Consensus 219 ~~vi~e~v~~~~G-~i~~---l~~i~~l~~~~g~~li~DEa~~~g-~-~g~------~g~~~~~~~~~~~~~~Di~~~s~ 286 (457)
++|++++++|++| .+.+ +++|+++|++||++||.|+++..+ . +.. .+....+..-..-.-.|+++.|.
T Consensus 179 k~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg 258 (460)
T PRK13238 179 PFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSA 258 (460)
T ss_pred eEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEec
Confidence 8999999999987 6666 679999999999999999987432 1 111 11111110000001247888888
Q ss_pred cccc-cCcccEEEec-HHHHHHHHhhC---Ccc-eecCCCcHHHHHHHH-HHHHHHhhCcHHHHHHHHHHHHHHHHhhcc
Q psy15447 287 EHAL-GSVGGFCVGS-SYIIEHHRLSG---SGY-CFSASLPPFLAVAAN-KALHLLKANPSLLTKLREKCNTMHSLLSQH 359 (457)
Q Consensus 287 sK~l-g~~gG~v~~~-~~~~~~~~~~~---~~~-~~~~~~~~~~~aaa~-a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~ 359 (457)
.|.+ +..||+++++ +++++.++... +++ ++++ ++..+..|+ .+++...+. +..+...++.++|.+.|++
T Consensus 259 ~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g--~~~~~~~Ala~~l~e~~~~-~~~~~~~~~~~~l~~~L~~- 334 (460)
T PRK13238 259 KKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGG--LAGRDMEALAVGLYEGMDE-DYLAYRIGQVEYLGEGLEE- 334 (460)
T ss_pred ccCCCCcceeEEEcChHHHHHHhhhcccccCCcccccC--cHHHHHHHHHhhHHHhhCh-HHHHHHHHHHHHHHHHHHH-
Confidence 8865 4458898888 57887776543 233 2222 333333333 334322122 3445555678999999998
Q ss_pred cccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHH-cCeeEeccccCcc-c-c------CCCCCeEEEEec
Q psy15447 360 KVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQ-AGFAITCPSHLDQ-E-A------KKQKPSIRITCN 429 (457)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~-~-~------~~~~~~lRi~~~ 429 (457)
.|+++..+.+++.+++.+..-... ...+....+++.+|.+ .||.+.+.+.+.. . . ....+.+|++++
T Consensus 335 ---~G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~ 411 (460)
T PRK13238 335 ---AGVPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIP 411 (460)
T ss_pred ---CCCCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecc
Confidence 789888777787777766431000 0000023568888775 5999987653322 1 0 112578999987
Q ss_pred C-CCCHHHHHHHHHHHHHHHHH
Q psy15447 430 I-SHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 430 ~-~~t~edi~~~~~~l~~~~~~ 450 (457)
- ..|++++|.+.++|+++.+.
T Consensus 412 rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 412 RRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred cccCCHHHHHHHHHHHHHHHHh
Confidence 4 45999999999999988754
No 229
>PLN02242 methionine gamma-lyase
Probab=99.93 E-value=9.2e-24 Score=209.21 Aligned_cols=244 Identities=11% Similarity=0.143 Sum_probs=185.4
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH-----HhcCCeEEEecCCCHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL-----IASRCKVQYFKHNNMQ 197 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~-----~~~g~~~~~~~~~d~~ 197 (457)
..+...+||+++|+++|.+.+++++||++|+..++.+++++||.|+++.+.|+.+...+ +..|.++..++..|++
T Consensus 74 ~~Pt~~~LE~~lA~l~g~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e 153 (418)
T PLN02242 74 FNPTVLNLGRQMAALEGTEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLE 153 (418)
T ss_pred CChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHH
Confidence 46788999999999999999999999999999999999999999999999887765543 3467888888888999
Q ss_pred HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCC
Q psy15447 198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTE 277 (457)
Q Consensus 198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~ 277 (457)
++++.+++ .++++|++++++||+|.+.++++|+++|++||+++|+||+|+.+.+.. . .+
T Consensus 154 ~l~~~i~~----------~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~~~-----~-~~----- 212 (418)
T PLN02242 154 AVKKAVVP----------GKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVLSP-----A-RL----- 212 (418)
T ss_pred HHHHhcCc----------CCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCCCH-----H-Hc-----
Confidence 99888743 236899999999999999999999999999999999999987543321 0 11
Q ss_pred CccEEEecCcccccCc----ccEEEecHHHHHHHHhhCCc--ceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q psy15447 278 EVDMIIGSLEHALGSV----GGFCVGSSYIIEHHRLSGSG--YCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNT 351 (457)
Q Consensus 278 ~~Di~~~s~sK~lg~~----gG~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~ 351 (457)
+.||++.|++|++++. ||++++++++++.++..... ...+..++|..++.....++.+ +.++++.++++.+
T Consensus 213 g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l~tl---~~r~~~~~~~a~~ 289 (418)
T PLN02242 213 GADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSERLPHL---SLRMKEHCRRAME 289 (418)
T ss_pred CCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCCCcH---HHHHHHHHHHHHH
Confidence 3589999999999643 59999999988887754332 2234445666655554444322 3467888999999
Q ss_pred HHHHhhcccccCCeEEecc-------------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHH
Q psy15447 352 MHSLLSQHKVTQRFLVQGH-------------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCI 401 (457)
Q Consensus 352 l~~~L~~~~~~~~~~~~~~-------------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~ 401 (457)
+.+.|+++ ++.+..+ ..+.++.+.+++.. .+.++++.+.
T Consensus 290 la~~L~~~----~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~~-------~~~~f~~~l~ 347 (418)
T PLN02242 290 YAKRMKEL----GLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTEE-------RANRLMRYLQ 347 (418)
T ss_pred HHHHHHhC----CCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCHH-------HHHHHHHHhh
Confidence 99999983 3343322 22457778776432 5567777765
No 230
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.93 E-value=6.4e-23 Score=203.67 Aligned_cols=329 Identities=12% Similarity=0.101 Sum_probs=219.4
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC--------CCcEEEecccHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG--------LEETALYSFGFS 151 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~~~i~~~sG~~ 151 (457)
..++||+.+++ .+...+.+.+++.+.++........ |+......++++.++++++ .+++++++++++
T Consensus 33 ~~~~~l~~g~p-~~~~~~~v~~a~~~~~~~~~~~~~~----y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~ 107 (394)
T PRK06836 33 DNVFDFSLGNP-SVPPPAAVKEALRELAEEEDPGLHG----YMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAG 107 (394)
T ss_pred CCeEEecCcCC-CCCCCHHHHHHHHHHHhcCCcCccc----CCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHH
Confidence 46789977653 3334577888887776542111111 2222233445555555542 345677777778
Q ss_pred HHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEec
Q psy15447 152 TSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEG 225 (457)
Q Consensus 152 a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~ 225 (457)
++..++.+++++||.|++..++|......+...|.++..++. .|++++++.+.. +++++++.+
T Consensus 108 al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~-----------~~~~v~~~~ 176 (394)
T PRK06836 108 ALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITP-----------KTKAVIINS 176 (394)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCc-----------CceEEEEeC
Confidence 999999999999999999999988887777888888887754 257788777742 456777788
Q ss_pred CCCCCCCCCC---hHHHHHHHHH------cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc--
Q psy15447 226 VYMNSADICP---LKDILSLRSK------YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-- 294 (457)
Q Consensus 226 v~~~~G~i~~---l~~i~~l~~~------~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-- 294 (457)
++||+|.+.| +++|.++|++ ||+++|+||+|....++. ......... .+ ..++++||||.+|.+|
T Consensus 177 p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~-~~-~~i~~~S~SK~~~~pGlR 252 (394)
T PRK06836 177 PNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDG--AEVPYIFKY-YD-NSIVVYSFSKSLSLPGER 252 (394)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCC--CCCCChHHc-cC-cEEEEecchhhccCccee
Confidence 9999999998 5677888898 899999999987544432 111111111 12 2589999999998655
Q ss_pred -cEEEecHHHHHHHH---hh--CCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEe
Q psy15447 295 -GFCVGSSYIIEHHR---LS--GSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQ 368 (457)
Q Consensus 295 -G~v~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~ 368 (457)
||+++++.+.+... .. ........+.+++...++...+. + ...++.++++.+.+.+.|++ .|+.+.
T Consensus 253 iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~-~~~~~~~~~~r~~l~~~L~~----~g~~~~ 324 (394)
T PRK06836 253 IGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLD---A-TVDVSIYKRNRDLLYDGLTE----LGFECV 324 (394)
T ss_pred eEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhC---C-hHHHHHHHHHHHHHHHHHHh----CCCEee
Confidence 99999877643211 10 01111011234444444433332 2 22456777888889999988 477765
Q ss_pred ccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 369 GHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 369 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
.+.++.++|+.++.. ...++++.|.++||.+.++..+ ...+++||+++ .+++++++.++.|++++
T Consensus 325 ~~~gg~~~~~~~~~~--------~~~~~~~~l~~~gv~v~~g~~f-----~~~~~iRi~~~--~~~~~~~~~i~~l~~~l 389 (394)
T PRK06836 325 KPQGAFYLFPKSPEE--------DDVAFCEKAKKHNLLLVPGSGF-----GCPGYFRLSYC--VDTETIERSLPAFEKLA 389 (394)
T ss_pred cCCceEEEEEeCCCC--------CHHHHHHHHHhCCEEEECchhc-----CCCCeEEEEec--CCHHHHHHHHHHHHHHH
Confidence 455567777766542 2356778888999999887542 22478999997 58999999999999988
Q ss_pred HHh
Q psy15447 449 DIA 451 (457)
Q Consensus 449 ~~~ 451 (457)
+.-
T Consensus 390 ~~~ 392 (394)
T PRK06836 390 KEY 392 (394)
T ss_pred HHh
Confidence 653
No 231
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=5.1e-24 Score=208.13 Aligned_cols=278 Identities=13% Similarity=0.116 Sum_probs=197.9
Q ss_pred HHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhcCCC-CEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHH
Q psy15447 127 HLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYVKRN-DAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQH 198 (457)
Q Consensus 127 ~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~~~g-d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~ 198 (457)
..+|++.+++++|.+ .+++++++++++..++.+++++| |.|++..+.|..+...++..|.++..++.+ |+++
T Consensus 59 ~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~ 138 (351)
T PRK01688 59 PKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQLDLPA 138 (351)
T ss_pred hHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHH
Confidence 478999999999854 45555566689999999999887 899999999998888888899988877643 5677
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc--CcEEEEEcCcccccccCCCCccccccCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY--QARIFVDESVSFGTLGSTGHGVTEYFGVST 276 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~ 276 (457)
+++.+. ++++|++.+++||||.+.+.+++.++++.. ++++|+||+|....... .........
T Consensus 139 l~~~~~------------~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~---s~~~~~~~~- 202 (351)
T PRK01688 139 IADNLD------------GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQA---SLAGWLAEY- 202 (351)
T ss_pred HHHhcc------------CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCC---ChHHHHhhC-
Confidence 766541 346777889999999999977777766532 68999999986433111 111111111
Q ss_pred CCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH--HhhCcHHHHHHHHHHHH
Q psy15447 277 EEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHL--LKANPSLLTKLREKCNT 351 (457)
Q Consensus 277 ~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~--~~~~~~~~~~l~~~~~~ 351 (457)
.+ -|++.||||++|.+| ||+++++++++.+......+ +.+.++.+++.++|+. .+...+.++.+++++++
T Consensus 203 ~n-~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~~~~~----~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~ 277 (351)
T PRK01688 203 PH-LVILRTLSKAFALAGLRCGFTLANEEVINLLLKVIAPY----PLSTPVADIAAQALSPQGIAAMRERVAEINANRQW 277 (351)
T ss_pred CC-EEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhccCCC----CCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 22 488999999998776 99999999998887654333 2344555555555542 11112345667778889
Q ss_pred HHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCC
Q psy15447 352 MHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNIS 431 (457)
Q Consensus 352 l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~ 431 (457)
+.+.|++ +.++....++.++++++.+.+ ..++.+.|+++||.++....+ +...+++||++.
T Consensus 278 l~~~L~~---~~~~~~~~ps~~nfi~~~~~~----------~~~l~~~L~~~gi~vr~~~~~----~~~~~~iRis~~-- 338 (351)
T PRK01688 278 LIAALKE---IPCVEQVFDSETNYILARFTA----------SSAVFKSLWDQGIILRDQNKQ----PGLSNCLRITIG-- 338 (351)
T ss_pred HHHHHHh---CCCCCeECCCCCcEEEEEcCC----------HHHHHHHHHHCCeEEEECCCc----CCCCCeEEEeCC--
Confidence 9999987 446543346678888877642 247889999999999865321 223579999986
Q ss_pred CCHHHHHHHHHHHH
Q psy15447 432 HTEQDMNSLIETLC 445 (457)
Q Consensus 432 ~t~edi~~~~~~l~ 445 (457)
+++|+++++++|+
T Consensus 339 -~~~e~~~l~~al~ 351 (351)
T PRK01688 339 -TREECQRVIDALR 351 (351)
T ss_pred -CHHHHHHHHHhhC
Confidence 7899999999873
No 232
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.93 E-value=5e-23 Score=202.92 Aligned_cols=296 Identities=17% Similarity=0.197 Sum_probs=210.3
Q ss_pred hHHHHHHHHHHHhhcCCC---c-EEEecccHHHHHHHHHhhcCCCCEEEEeCc-ccHHH-HHHHHhcCCeEEEecC----
Q psy15447 124 NVVHLDLENDIASFMGLE---E-TALYSFGFSTSASAIAAYVKRNDAVFVDEN-INFAI-QTGLIASRCKVQYFKH---- 193 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~---~-~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~-~h~~~-~~~~~~~g~~~~~~~~---- 193 (457)
.+...++++.+++++|.+ . ++++++|+.++..++.++..++|.|++... +++.. ...+...|.++..++.
T Consensus 36 ~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~ 115 (368)
T PRK13479 36 NALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGEDE 115 (368)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHHHHHHHHHcCCcEEEEECCCCC
Confidence 357889999999999964 2 456779999999999999888887666444 44433 3556677877776653
Q ss_pred -CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcccccc
Q psy15447 194 -NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYF 272 (457)
Q Consensus 194 -~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~ 272 (457)
.|++++++.+++. ++.++|.+.++.+++|.+.|+++|.++|+++|+++|+|+++++|... .
T Consensus 116 ~~d~~~l~~~l~~~---------~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~---------~ 177 (368)
T PRK13479 116 PPDAAEVEAALAAD---------PRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIP---------I 177 (368)
T ss_pred CCCHHHHHHHHHhC---------CCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCcc---------c
Confidence 3688888887642 24467778889999999999999999999999999999988775321 1
Q ss_pred CCCCCCccEEEecCcccc-cCcc-cEEEecHHHHHHHHhhCCccee---------------cCCCcHHHHHHHHHHHHHH
Q psy15447 273 GVSTEEVDMIIGSLEHAL-GSVG-GFCVGSSYIIEHHRLSGSGYCF---------------SASLPPFLAVAANKALHLL 335 (457)
Q Consensus 273 ~~~~~~~Di~~~s~sK~l-g~~g-G~v~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~aaa~a~l~~~ 335 (457)
++...++|++++|++|++ |+.| ||++.++++++.+.....++.+ ..+.+....++..++++.+
T Consensus 178 ~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l 257 (368)
T PRK13479 178 DIAELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLEL 257 (368)
T ss_pred cccccCceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHH
Confidence 222235689999999987 5566 9999999888776543222110 0133555555666677765
Q ss_pred hhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC--CCCe-EEEEecCCcchHHHHHHHHHHHHHHHHcCeeEec
Q psy15447 336 KAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR--DTPL-KYLYLQKSDDEVASKKLLQTICDMCIQAGFAITC 409 (457)
Q Consensus 336 ~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~--~~~~-~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~ 409 (457)
.+. ++..++++++.+++++.|++ .|+.+..++ ..+. ..+.+...... ...++.++|.++||.+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~L~~~gi~v~~ 328 (368)
T PRK13479 258 EEEGGVPARGARYANNQRTLVAGMRA----LGFEPLLDAEIQSPIIVTFHAPADPAY-----DFKEFYERLKEQGFVIYP 328 (368)
T ss_pred HHhhCHHHHHHHHHHHHHHHHHHHHH----cCCcccCCchhcCceEEEEECCCCCCc-----CHHHHHHHHHHCCEEEec
Confidence 332 45678889999999999988 466654221 2332 33443332100 345789999999999976
Q ss_pred cccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 410 PSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 410 ~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+.. ...+.+|++....+|++|+++++++|+++++++.
T Consensus 329 g~~------~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~~ 365 (368)
T PRK13479 329 GKL------TQVDTFRIGCIGDVDAADIRRLVAAIAEALYWMG 365 (368)
T ss_pred CCC------CCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 542 1246899998667899999999999999987653
No 233
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.93 E-value=4.6e-23 Score=204.73 Aligned_cols=298 Identities=14% Similarity=0.106 Sum_probs=218.3
Q ss_pred ChHHHHHHHHHHHhhcCCC---cEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHH--HHHHhcCCeEEEecCC---
Q psy15447 123 TNVVHLDLENDIASFMGLE---ETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQ--TGLIASRCKVQYFKHN--- 194 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~--~~~~~~g~~~~~~~~~--- 194 (457)
..+...++++.+++++|.+ .+++.++|++++..++..+.++||.|++..+.|.+.. ..++..|.++..++.+
T Consensus 40 ~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~ 119 (401)
T PLN02409 40 FPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQ 119 (401)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEECCCCC
Confidence 3677888999999999864 3577778889999999889999999999887776542 4456668887776543
Q ss_pred --CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHH--HHHcCcEEEEEcCcccccccCCCCcccc
Q psy15447 195 --NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSL--RSKYQARIFVDESVSFGTLGSTGHGVTE 270 (457)
Q Consensus 195 --d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l--~~~~g~~li~DEa~~~g~~g~~g~~~~~ 270 (457)
|++++++.+++.. .+++++|++.++.+++|.+.|+++|.++ |+++|+++|+|+++++|...
T Consensus 120 ~~~~~~l~~~l~~~~-------~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~-------- 184 (401)
T PLN02409 120 GADLDILKSKLRQDT-------NHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALD-------- 184 (401)
T ss_pred CCCHHHHHHHHhhCc-------CCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCcc--------
Confidence 6888888886421 0246788888899999999999999999 99999999999999865431
Q ss_pred ccCCCCCCccEEEecCcccccC-cc-cEEEecHHHHHHHHhhCC-cce--------------e-cCCCcHHHHHHHHHHH
Q psy15447 271 YFGVSTEEVDMIIGSLEHALGS-VG-GFCVGSSYIIEHHRLSGS-GYC--------------F-SASLPPFLAVAANKAL 332 (457)
Q Consensus 271 ~~~~~~~~~Di~~~s~sK~lg~-~g-G~v~~~~~~~~~~~~~~~-~~~--------------~-~~~~~~~~~aaa~a~l 332 (457)
.++...++|+++.|.+|++++ .| |+++.++++++.+..... ++. + ..+.+.....+..+++
T Consensus 185 -id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al 263 (401)
T PLN02409 185 -FRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAAL 263 (401)
T ss_pred -ccccccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHH
Confidence 222223568999999999954 44 889999888877653211 110 1 1133445556667788
Q ss_pred HHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-C--C-CeEEEEecCCcchHHHHHHHHHHHHHHH-HcCe
Q psy15447 333 HLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR-D--T-PLKYLYLQKSDDEVASKKLLQTICDMCI-QAGF 405 (457)
Q Consensus 333 ~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~-~--~-~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi 405 (457)
+++.+. +.+.++.+++.+++++.|++ .|+++..+. . + .+.++.++... ...++.+.|. ++||
T Consensus 264 ~~~~~~G~e~i~~~~~~l~~~l~~~L~~----~g~~~~~~~~~~~s~~v~~~~~p~~~-------~~~~l~~~l~~~~~i 332 (401)
T PLN02409 264 DLIFEEGLENVIARHARLGEATRLAVEA----WGLKLCTKKPEWRSDTVTAVVVPEGI-------DSAEIVKNAWKKYNL 332 (401)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHH----cCCeeccCChhhcccceEEEeCCCCC-------CHHHHHHHHHHhCCE
Confidence 876543 45778899999999999988 577765432 1 3 23445555443 3456777776 4599
Q ss_pred eEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 406 AITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 406 ~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
.+..+..+ ..+..+||+....+|++|+..++++|++++..+.
T Consensus 333 ~i~~G~~~-----~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 333 SLGLGLNK-----VAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred EEEcCCCc-----ccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 98876532 2357899999999999999999999999988765
No 234
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=2.2e-23 Score=204.51 Aligned_cols=284 Identities=13% Similarity=0.103 Sum_probs=200.7
Q ss_pred HHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhcCCC-CEEEEeCcccHHHHHHHHhcCCeEEEecCC--------C
Q psy15447 127 HLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYVKRN-DAVFVDENINFAIQTGLIASRCKVQYFKHN--------N 195 (457)
Q Consensus 127 ~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~~~g-d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~--------d 195 (457)
..+|++.+|+++|.+ ++++++++++++..++.+++.+| |.|++..++|..+....+..|.++..++.. |
T Consensus 61 ~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d 140 (364)
T PRK04781 61 PPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHAD 140 (364)
T ss_pred HHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcC
Confidence 478999999999854 34555555689999999999998 789999999887777778889888887642 3
Q ss_pred HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHH--cCcEEEEEcCcccccccCCCCccccccC
Q psy15447 196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSK--YQARIFVDESVSFGTLGSTGHGVTEYFG 273 (457)
Q Consensus 196 ~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~--~g~~li~DEa~~~g~~g~~g~~~~~~~~ 273 (457)
++++.+.+.. .+++++++.+++||+|.+.+.+++.++++. +++++|+||+|....... ......+
T Consensus 141 ~~~l~~~~~~----------~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~---~~~~~~~ 207 (364)
T PRK04781 141 VPAIVAAALA----------SNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVP---SAVGLLA 207 (364)
T ss_pred HHHHHHHHhc----------cCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCc---chHHHHh
Confidence 4454433322 345677777999999999998888777764 478999999987543221 1111112
Q ss_pred CCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH--hhCcHHHHHHHHH
Q psy15447 274 VSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL--KANPSLLTKLREK 348 (457)
Q Consensus 274 ~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~--~~~~~~~~~l~~~ 348 (457)
.. ++ .|+++||||++|.+| ||+++++++++.+......+ +.+.+...++.++++.- ....+.+++++++
T Consensus 208 ~~-~~-vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~~----~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 281 (364)
T PRK04781 208 RY-DN-LAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAPY----PVPTPCAALAEQALSAPALAVTARRVAEVRAE 281 (364)
T ss_pred hC-CC-EEEEecChhhcccccceeeeeeCCHHHHHHHHhccCCC----CCCHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 11 23 488999999998666 99999999999887654332 23555555555555321 1112344567788
Q ss_pred HHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe
Q psy15447 349 CNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC 428 (457)
Q Consensus 349 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~ 428 (457)
++.+.+.|++ ++++....++.++++++.+++ ..++.+.|.++||.+++.... +...+++||++
T Consensus 282 r~~l~~~L~~---~~~~~~~~p~~g~f~~~~~~~----------~~~~~~~l~~~gI~v~~~~~~----~~~~~~~Ris~ 344 (364)
T PRK04781 282 RERLHAALAQ---LPGVRRVYPSQGNFLLVRFDD----------AEAAFQALLAAGVVVRDQRAA----PRLSDALRITL 344 (364)
T ss_pred HHHHHHHHHh---CCCCCeECCCCCcEEEEEcCC----------HHHHHHHHHHCCeEEeeCCCC----CCCCCeEEEeC
Confidence 8899999987 446533346778888888753 236788899999999886421 22357899999
Q ss_pred cCCCCHHHHHHHHHHHHHHHH
Q psy15447 429 NISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 429 ~~~~t~edi~~~~~~l~~~~~ 449 (457)
. +++++++++++|+++..
T Consensus 345 ~---~~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 345 G---TPEQNDRVLAALQRTQA 362 (364)
T ss_pred C---CHHHHHHHHHHHHHHHh
Confidence 6 79999999999988654
No 235
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.93 E-value=2e-23 Score=204.23 Aligned_cols=290 Identities=18% Similarity=0.202 Sum_probs=208.7
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHHH
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQHL 199 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~l 199 (457)
++....||++||++.|.+.+++++||++|+..++.+++++||.|++..+.|+....- ....|.++..++..+.+.+
T Consensus 49 nPt~~~lE~~lA~l~g~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~l 128 (377)
T TIGR01324 49 TLTHFALQDAMCELEGGAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGEDI 128 (377)
T ss_pred CccHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHH
Confidence 567889999999999999999999999999999999999999999888777655432 3445777777776665677
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV 279 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~ 279 (457)
++.++ +++++|++|++.|++|.+.|+++|.++|++||+++|+|++|+.|...+ . + ..++
T Consensus 129 ~~~i~-----------~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~---p------l-~~ga 187 (377)
T TIGR01324 129 ATLIQ-----------PNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFK---P------L-EHGV 187 (377)
T ss_pred HHhcC-----------CCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC---c------c-ccCc
Confidence 77664 356899999999999999999999999999999999999998876532 1 1 1356
Q ss_pred cEEEecCcccccC----cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Q psy15447 280 DMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSL 355 (457)
Q Consensus 280 Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~ 355 (457)
|++++|++|++|+ .||+++++++.++.++.. ...++..++|..+...+..++.+. .++++.++++..+.+.
T Consensus 188 Divv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~--~~~~G~~l~p~~a~~~~rgl~tl~---~R~~~~~~~a~~la~~ 262 (377)
T TIGR01324 188 DISIQAGTKYLVGHSDIMIGTVVANARTWDQLREH--SYLMGQMVDADDAYTTLRGLRTLG---VRLKQHQESSLAIAKW 262 (377)
T ss_pred eEEEecCceeccCCCCceEEEEEeCHHHHHHHHHH--HHHhCCCCCHHHHHHHHhhhhhHH---HHHHHHHHHHHHHHHH
Confidence 8999999999964 368899988877766532 345677789988888887776553 3688889999999999
Q ss_pred hhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc------
Q psy15447 356 LSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ------ 415 (457)
Q Consensus 356 L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~------ 415 (457)
|++++.+..+..++ ...+.++.+.+++.. .....++.+.|.--++.++.+..-+.
T Consensus 263 L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~-----~~~~~~~~~~l~~~~~~~slG~~~sl~~~~~~ 337 (377)
T TIGR01324 263 LSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLT-----QKQVHAFLDHLQLFGLGYSWGGYESLALCNQP 337 (377)
T ss_pred HHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCC-----HHHHHHHHHhCCcceEeccCCCccceeecCCC
Confidence 98854332222211 123668888886421 11456788877655554433221100
Q ss_pred --------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 416 --------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 416 --------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
.....++.+|+++.+.. .+.+++-|++++
T Consensus 338 ~~~~~~~~~~~~~~~liR~svGlE~----~~dl~~dl~~al 374 (377)
T TIGR01324 338 ELGHRPNIKRNLEGPLIRVHIGLEN----VDDLKADLKAGF 374 (377)
T ss_pred CCCHHHHHhccCCCCEEEEEeCCCC----HHHHHHHHHHHH
Confidence 00112368999998754 444444444444
No 236
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.93 E-value=3.9e-23 Score=202.56 Aligned_cols=288 Identities=17% Similarity=0.187 Sum_probs=210.2
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC------C
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN------N 195 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d 195 (457)
..+...++++.+++++|.+.+++++||++|+..++.++ .++||.|+++.+.|.++...+...|.++..++.+ |
T Consensus 16 ~~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d 95 (352)
T cd00616 16 LGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLGATPVFVDIDPDTYNID 95 (352)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCCCcCCcC
Confidence 35678999999999999999999999999999999988 5899999999999999998888889888876532 6
Q ss_pred HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCC
Q psy15447 196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVS 275 (457)
Q Consensus 196 ~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~ 275 (457)
++++++.++ +++++|++.+ ++|.+.|+++|+++|++||+++|+|++|++|.... +. ..+.
T Consensus 96 ~~~l~~~i~-----------~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~-~~----~~~~- 155 (352)
T cd00616 96 PELIEAAIT-----------PRTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYK-GR----KVGT- 155 (352)
T ss_pred HHHHHHhcC-----------cCCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeEC-CE----Eccc-
Confidence 778877663 2446666654 57889999999999999999999999999775421 11 1111
Q ss_pred CCCccEEEecCc--cccc-CcccEEEec-HHHHHHHHhh---CCc----------ceecCCCcHHHHHHHHHHHHHHhhC
Q psy15447 276 TEEVDMIIGSLE--HALG-SVGGFCVGS-SYIIEHHRLS---GSG----------YCFSASLPPFLAVAANKALHLLKAN 338 (457)
Q Consensus 276 ~~~~Di~~~s~s--K~lg-~~gG~v~~~-~~~~~~~~~~---~~~----------~~~~~~~~~~~~aaa~a~l~~~~~~ 338 (457)
..|+.+.|++ |+++ +.||+++.+ +++.+.++.. +.. ..+...++++.++.++..++.+
T Consensus 156 --~~d~~~~S~~~~K~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~--- 230 (352)
T cd00616 156 --FGDAGAFSFHPTKNLTTGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKL--- 230 (352)
T ss_pred --CcceeEEcCCCCCCCcccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhh---
Confidence 1266777876 9995 456777665 5666655421 110 1123346777777777666554
Q ss_pred cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC-----CCeEEEEecC--CcchHHHHHHHHHHHHHHHHcCeeEeccc
Q psy15447 339 PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD-----TPLKYLYLQK--SDDEVASKKLLQTICDMCIQAGFAITCPS 411 (457)
Q Consensus 339 ~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~-----~~~~~i~~~~--~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~ 411 (457)
++..++.+++.+++++.|++ ++|+++..+.. .+++.+.+++ .. ...++.+.|.++||.+....
T Consensus 231 ~~~~~~~~~~~~~~~~~L~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~L~~~gI~~~~~~ 300 (352)
T cd00616 231 DEIIARRREIAERYKELLAD---LPGIRLPDVPPGVKHSYHLYVIRLDPEAGE-------SRDELIEALKEAGIETRVHY 300 (352)
T ss_pred HHHHHHHHHHHHHHHHHhcC---CCCccCCCCCCCCceeeEEEEEEECCcCCC-------CHHHHHHHHHHCCCCeeeec
Confidence 34678888999999999988 56777654322 3466666653 22 45689999999999877554
Q ss_pred cCccccCC------------------CCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447 412 HLDQEAKK------------------QKPSIRITCNISHTEQDMNSLIETLC 445 (457)
Q Consensus 412 ~~~~~~~~------------------~~~~lRi~~~~~~t~edi~~~~~~l~ 445 (457)
.|....+. ....+|++++..+|++||++++++|+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 301 PPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 44321110 02689999999999999999999874
No 237
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.93 E-value=1e-22 Score=199.93 Aligned_cols=324 Identities=12% Similarity=0.023 Sum_probs=217.8
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAI 157 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai 157 (457)
..++||+.+.. .+...+.+.+++.+.+... ..+ +... ..+|++.+|++++.+ .+++++++.+++..++
T Consensus 22 ~~~i~l~~~~n-~~~~~~~~~~a~~~~~~~~-~~Y-------~~~~-~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~ 91 (360)
T PRK07392 22 DAILDFSASIN-PLGPPESVIAAIQSALSAL-RHY-------PDPD-YRELRLALAQHHQLPPEWILPGNGAAELLTWAG 91 (360)
T ss_pred ccEEEeCCcCC-CCCCCHHHHHHHHHHHHHh-hcC-------CCcC-HHHHHHHHHHHhCcChhhEEECCCHHHHHHHHH
Confidence 46799987632 2445688999988777642 111 1111 357888999988754 4555556668888888
Q ss_pred HhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCC-------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447 158 AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNN-------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS 230 (457)
Q Consensus 158 ~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d-------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~ 230 (457)
.++. +||.|++..++|..+...++..|.++..++..+ ..++++..+.. .+++++++.+++|||
T Consensus 92 ~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~nP~NPT 161 (360)
T PRK07392 92 RELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL---------TPNDGLLLNNPHNPT 161 (360)
T ss_pred HHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc---------cCCCEEEEeCCCCCC
Confidence 8765 678999999999999999999999988776431 12344443321 234677888899999
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHH
Q psy15447 231 ADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHH 307 (457)
Q Consensus 231 G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~ 307 (457)
|.+.+.++|.++++++++ +|+||+|....+......+....+ .....|+++||||.+|.+| ||+++++++++.+
T Consensus 162 G~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~--~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~ 238 (360)
T PRK07392 162 GKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLA--EYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRW 238 (360)
T ss_pred CCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhh--cCCCEEEEEechhhhcCCchheeeeeCCHHHHHHH
Confidence 999999999999999985 666999875433211111111111 1222488999999998665 9999999988887
Q ss_pred HhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchH
Q psy15447 308 RLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEV 387 (457)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 387 (457)
...... .+.+.+...++.+.++.-.-....++.++++.+++.+.|++ ++++.+. ++.+.++++.+..
T Consensus 239 ~~~~~~----~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~---~~~~~~~-~~~~~fl~~~~~~----- 305 (360)
T PRK07392 239 QQWRDP----WPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLAS---LPGLTPL-PSAANFLLVQSQG----- 305 (360)
T ss_pred HhhCCC----CCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHh---CCCcEEC-CCCCCEEEEEcCC-----
Confidence 643321 23466666666666542111123445677788888888887 4677664 4567777776643
Q ss_pred HHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 388 ASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 388 ~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
...++++.++ ++||.+.++..+. ....+++||++. +.++.+++.++++++++
T Consensus 306 ----~~~~l~~~ll~~~gv~v~pg~~f~---~~~~~~iRi~~~---~~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 306 ----SALQLQEKLLQQHRILIRDCLSFP---ELGDRYFRVAVR---TEAENQRLLEALAAILA 358 (360)
T ss_pred ----CHHHHHHHHHhhCCEEEEeCCCCC---CCCCCEEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 2346777764 5699999876431 123579999996 46677788888876653
No 238
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.93 E-value=2.7e-23 Score=204.81 Aligned_cols=292 Identities=17% Similarity=0.208 Sum_probs=207.1
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHHH
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQHL 199 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~l 199 (457)
.+...+||+++|+++|.+.+++++||+.|+..++.+++++||.|+++.+.|+.+... +...|.++..++.+|++++
T Consensus 58 ~p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~l 137 (391)
T TIGR01328 58 NPTVSNLEGRIAFLEGTEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEEV 137 (391)
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHHH
Confidence 456789999999999999999999999999999999999999999999888765433 4456888888988889988
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV 279 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~ 279 (457)
++.+.+ ++++|++|+++||+|.+.|+++|.++|+++|+++|+|++++.+..+. . .+ ...
T Consensus 138 ~~~i~~-----------~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~---~----~~---~g~ 196 (391)
T TIGR01328 138 KAHIKD-----------NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTN---P----VA---LGV 196 (391)
T ss_pred HHhhcc-----------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCC---c----hh---cCC
Confidence 887742 46799999999999999999999999999999999999998665432 1 11 245
Q ss_pred cEEEecCcccccCc----ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Q psy15447 280 DMIIGSLEHALGSV----GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSL 355 (457)
Q Consensus 280 Di~~~s~sK~lg~~----gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~ 355 (457)
|+++.|++|.+|+. ||++++++++++.++.......++..++|..++.++..++.+ +.++++..+++.++.+.
T Consensus 197 Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~tl---~~r~~~~~~na~~la~~ 273 (391)
T TIGR01328 197 DVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLKTL---NIRMKRHSENAMKVAEY 273 (391)
T ss_pred CEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCcH---HHHHHHHHHHHHHHHHH
Confidence 89999999999753 588999999888877533222345567888888887766544 34678888999999999
Q ss_pred hhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecc------ccCcc
Q psy15447 356 LSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCP------SHLDQ 415 (457)
Q Consensus 356 L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~------~~~~~ 415 (457)
|++++.+..+..++ ...+.++.+.++.+. ....++.+.|.=-.+..+.+ .+|..
T Consensus 274 L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~------~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~ 347 (391)
T TIGR01328 274 LKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGF------AGAKKLLNNLKLIRLAVSLGDAETLIQHPAS 347 (391)
T ss_pred HHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCH------HHHHHHHHhCCcceEecCCCCCcccCcCCCc
Confidence 98843222111111 012557888886432 13455666554111111111 11111
Q ss_pred ----c--------cCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 416 ----E--------AKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 416 ----~--------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
. ....++.+|+++.+. |.+.+++-|+++++
T Consensus 348 ~~~~~~~~~~~~~~gi~~~liR~svGlE----~~~dl~~dl~~al~ 389 (391)
T TIGR01328 348 MTHAVVPKEEREAAGITDGMIRLSVGLE----DADDLIADLKQALD 389 (391)
T ss_pred cccccCCHHHHHhcCCCCCeEEEEeCcC----CHHHHHHHHHHHHh
Confidence 0 011256899999864 45555666655554
No 239
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=3.8e-23 Score=202.42 Aligned_cols=276 Identities=15% Similarity=0.129 Sum_probs=195.2
Q ss_pred HHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhcCCC-CEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHH
Q psy15447 127 HLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYVKRN-DAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQH 198 (457)
Q Consensus 127 ~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~~~g-d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~ 198 (457)
..+|++.+|+++|.+ .+++++++++++..++.+++++| |.|++..+.|..+...++..|.++..++.+ |++.
T Consensus 62 ~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~ 141 (354)
T PRK04635 62 PPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDY 141 (354)
T ss_pred HHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHH
Confidence 478899999999854 44555566689999999999998 899999999988777778889988887653 3444
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc-CcEEEEEcCcccccccCCCCccccccCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY-QARIFVDESVSFGTLGSTGHGVTEYFGVSTE 277 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~-g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~ 277 (457)
++. + +++++|++++++||||.+.+.+++.++++.. ++++|+||+|....... ......... +
T Consensus 142 l~~-~------------~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~---s~~~~~~~~-~ 204 (354)
T PRK04635 142 IEQ-L------------DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEY---SVADLLASY-P 204 (354)
T ss_pred HHh-c------------cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCc---chHHHHhhC-C
Confidence 431 1 2456777889999999999999999998864 79999999986432111 111111111 2
Q ss_pred CccEEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH--HhhCcHHHHHHHHHHHHH
Q psy15447 278 EVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHL--LKANPSLLTKLREKCNTM 352 (457)
Q Consensus 278 ~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~--~~~~~~~~~~l~~~~~~l 352 (457)
+ -++++||||++|.+| ||+++++++++.+......+ +.+.....++.+++.. .+...+.++.++++++++
T Consensus 205 ~-~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~l~~~~~~~----~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l 279 (354)
T PRK04635 205 N-LVVLRTLSKAFALAGARCGFTLANEELIEILMRVIAPY----PVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARL 279 (354)
T ss_pred C-EEEEechHHHhhhhHHHHhhhhCCHHHHHHHHhhcCCC----CCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 3 378999999998766 99999999998876433222 2344444555555532 111123456677788899
Q ss_pred HHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCC
Q psy15447 353 HSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISH 432 (457)
Q Consensus 353 ~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~ 432 (457)
.+.|++ ..++.+. ++.+.++++.+.+ ..++.+.|.++||.++.... +..++++||+++
T Consensus 280 ~~~L~~---~~~~~~~-~~~g~f~~~~~~~----------~~~~~~~l~~~gv~v~~~~~-----~~~~~~lRis~~--- 337 (354)
T PRK04635 280 QAALSM---YGGAKVL-EGNGNYVLAKFDD----------VDAVFKALWDAGIVARAYKD-----PRLANCIRFSFS--- 337 (354)
T ss_pred HHHHHh---CCCceEC-CCCCcEEEEECCC----------HHHHHHHHHHCCEEEEECCC-----CCCCCeEEEEeC---
Confidence 999988 3446654 4567777776652 23577888899999975432 223578999985
Q ss_pred CHHHHHHHHHHHHH
Q psy15447 433 TEQDMNSLIETLCK 446 (457)
Q Consensus 433 t~edi~~~~~~l~~ 446 (457)
+++|+++++++|++
T Consensus 338 ~~e~~~~l~~al~~ 351 (354)
T PRK04635 338 NRAETDKLIGLIRN 351 (354)
T ss_pred CHHHHHHHHHHHHH
Confidence 79999999999975
No 240
>PRK05968 hypothetical protein; Provisional
Probab=99.93 E-value=1.6e-23 Score=206.47 Aligned_cols=289 Identities=17% Similarity=0.195 Sum_probs=214.2
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHH----HHHHhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQ----TGLIASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~----~~~~~~g~~~~~~~~~d~~~ 198 (457)
..+...+||+++|++.|.+.+++++||+.|+..++.+++++||.|++....|+.+. ..+...|.++..++.+|+++
T Consensus 61 ~~p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~ 140 (389)
T PRK05968 61 DNPTVRAFEEMLAKLEGAEDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEA 140 (389)
T ss_pred CChhHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHH
Confidence 45668999999999999999999999999999999999999999999988887754 34556788999998889999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.+. ++++|++|++.|+.+.+.++++|.++|++||+++|+|++++.+.... . +. .+
T Consensus 141 l~~~i~------------~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~---p------~~-~g 198 (389)
T PRK05968 141 VAKALP------------GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQR---P------IT-LG 198 (389)
T ss_pred HHHhcc------------cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccC---c------hh-cC
Confidence 988762 24688899999999999999999999999999999999987654321 1 11 24
Q ss_pred ccEEEecCcccccC----cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS 354 (457)
Q Consensus 279 ~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~ 354 (457)
+|+++.|++|.+++ .||++++++++++.++.....+ .+..++|+.++.++..|+.+ +.++++-.++++++.+
T Consensus 199 ~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~-~g~~~~~~~A~~~l~~L~tl---~~r~~~~~~~a~~la~ 274 (389)
T PRK05968 199 VDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPY-LGAKLSPFEAWLLLRGLRTL---PLRMKAHEASALEIAR 274 (389)
T ss_pred CcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHh-CCCCCChHHHHHHHcccCcH---HHHHHHHHHHHHHHHH
Confidence 58999999999975 3688899998888776432222 33457888888887777655 3467778888999999
Q ss_pred HhhcccccCCeEEeccC------------CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc-------
Q psy15447 355 LLSQHKVTQRFLVQGHR------------DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ------- 415 (457)
Q Consensus 355 ~L~~~~~~~~~~~~~~~------------~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~------- 415 (457)
.|++ .+++..+..+ .+.++.+.+++.. ...++++.|...++.++.+...+.
T Consensus 275 ~L~~---~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~-------~~~~f~~~L~~~~~~~s~G~~~slv~p~~~~ 344 (389)
T PRK05968 275 RLKA---HPVVERVCHPALANHPPAGLSGTSGLFSFIFREGI-------DVRAFADALKLFRLGVSWGGHESLVVPAEVV 344 (389)
T ss_pred HHHh---CCCccEEECCCCCCChHHhCCCCceEEEEEECCHH-------HHHHHHHhCCccEEecCCCCCCceeeeCccc
Confidence 9988 4555333211 2447778776432 556888888776766655444330
Q ss_pred -----------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 416 -----------EAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 416 -----------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
.....++.+|+++.+..+++=++.+-.+|+++
T Consensus 345 ~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 345 LQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAAA 387 (389)
T ss_pred ccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHHh
Confidence 01112578999999876665556666665543
No 241
>PRK07908 hypothetical protein; Provisional
Probab=99.93 E-value=5.7e-23 Score=200.88 Aligned_cols=317 Identities=12% Similarity=0.102 Sum_probs=214.9
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASA 156 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~a 156 (457)
++.++||+.|.. .+...+.+.+++.+.+..... + ....-..++++.++++++.+ +.++++++++++..+
T Consensus 21 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~-Y-------~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~ 91 (349)
T PRK07908 21 GPGLLDFAVNVR-HDTPPEWLRERLAARLGDLAA-Y-------PSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALL 91 (349)
T ss_pred CCCeEEecCCCC-CCCCCHHHHHHHHHHhhHhhc-C-------CCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHH
Confidence 578999998753 344467899999888765321 1 11223467888888888744 445555666888877
Q ss_pred HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHH--HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC
Q psy15447 157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQ--HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC 234 (457)
Q Consensus 157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~--~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~ 234 (457)
+. +++++. ++..+++......++..|.++..++..+.- +++ .+. .+++++++.+++||||.+.
T Consensus 92 ~~--l~~~~v-iv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~-~l~-----------~~~~~i~l~np~NPTG~~~ 156 (349)
T PRK07908 92 AR--LRPRRA-AVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPA-AVP-----------DDADLVVIGNPTNPTSVLH 156 (349)
T ss_pred Hh--cCCCeE-EEeCCCChHHHHHHHHcCCEEEeeccCcccCcChh-Hhc-----------cCCCEEEEcCCCCCCCCCc
Confidence 76 466654 456788887778888889998887653200 111 121 2346888888999999999
Q ss_pred ChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhC
Q psy15447 235 PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSG 311 (457)
Q Consensus 235 ~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~ 311 (457)
|.++|.++|++ +.++|+||+|+....+.. ..+.. ..+++ .++++||||.+|.+| ||+++++++++.+....
T Consensus 157 ~~~~l~~l~~~-~~~iIvDe~y~~~~~~~~-~~l~~---~~~~~-~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~ 230 (349)
T PRK07908 157 PAEQLLALRRP-GRILVVDEAFADAVPGEP-ESLAG---DDLPG-VLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGR 230 (349)
T ss_pred CHHHHHHHHhc-CCEEEEECcchhhccCCc-ccccc---ccCCC-EEEEeecccccCCccceeeeeecCHHHHHHHHhcC
Confidence 99999999975 778889999875332221 11111 12223 488899999998655 99999999998887543
Q ss_pred CcceecCCCcHHHHHHHHHHHH--HHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHH
Q psy15447 312 SGYCFSASLPPFLAVAANKALH--LLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVAS 389 (457)
Q Consensus 312 ~~~~~~~~~~~~~~aaa~a~l~--~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 389 (457)
..+ +.++...+++.+.++ ..+..++.+++++++.+++.+.|++ .++++..++.+.++++.+++.
T Consensus 231 ~~~----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~p~~g~~~~~~~~~~------ 296 (349)
T PRK07908 231 AHW----PVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRA----VGARVVDPAAAPFVLVRVPDA------ 296 (349)
T ss_pred CCC----CccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHh----CCcEeccCCCceEEEEECCcH------
Confidence 322 223444343333332 1111234667788888999999988 377776557788888877642
Q ss_pred HHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 390 KKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 390 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
..+.+.|.++||.+.++..+. ....+++||++. +++|+++++++|++++.
T Consensus 297 ----~~~~~~l~~~gI~v~~g~~f~---~~~~~~vRis~~---~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 297 ----ELLRKRLRERGIAVRRGDTFP---GLDPDYLRLAVR---PRAEVPVLVQALAEILK 346 (349)
T ss_pred ----HHHHHHHHhCCEEEEECCCCC---CCCCCeEEEEeC---CCccHHHHHHHHHHHHh
Confidence 367788889999998875421 113579999994 78999999999998764
No 242
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.93 E-value=5.5e-23 Score=199.19 Aligned_cols=274 Identities=15% Similarity=0.119 Sum_probs=192.3
Q ss_pred HHHHHHHHHhhcCCC-cEEEecccH-HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHH
Q psy15447 127 HLDLENDIASFMGLE-ETALYSFGF-STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLR 204 (457)
Q Consensus 127 ~~~l~~~la~~~g~~-~~i~~~sG~-~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~ 204 (457)
..++++.+++++|.+ ..+++++|+ +++..+. .++.+| .|++..++|..+...+...|.++..++ |++++++.++
T Consensus 49 ~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~-~~l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~--d~~~l~~~~~ 124 (330)
T TIGR01140 49 YDELRAAAAAYYGLPAASVLPVNGAQEAIYLLP-RLLAPG-RVLVLAPTYSEYARAWRAAGHEVVELP--DLDRLPAALE 124 (330)
T ss_pred HHHHHHHHHHHhCCChhhEEECCCHHHHHHHHH-HHhCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC--CHHHHHhhcc
Confidence 488999999999964 456666666 5555544 445677 477778888888888888899988887 8888887763
Q ss_pred hhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccE
Q psy15447 205 QQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDM 281 (457)
Q Consensus 205 ~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di 281 (457)
+ +++++++.++||+|.+.+ +++|+++|++||+++|+||+|+..... ..+....+ ..+.+|
T Consensus 125 ~------------~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~---~~~~~~~~--~~~~~i 187 (330)
T TIGR01140 125 E------------LDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD---ASLAPQAA--RFPGLV 187 (330)
T ss_pred c------------CCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCc---cchhhHhc--cCCCEE
Confidence 2 236666777999999999 667888899999999999998754332 11222111 123369
Q ss_pred EEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhc
Q psy15447 282 IIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQ 358 (457)
Q Consensus 282 ~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~ 358 (457)
+++|+||++|.+| ||+++++++++.+...... + +.+++..+++.+.++.-.-....+++++++.+++.+.|++
T Consensus 188 ~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~ 263 (330)
T TIGR01140 188 VLRSLTKFFGLAGLRLGFVVAHPALLARLREALGP--W--TVNGPARAAGRAALADTAWQAATRARLAAERARLAALLAR 263 (330)
T ss_pred EEEecchhhcCchhhhhheeCCHHHHHHHHhcCCC--C--CchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999998766 9999999998888754432 2 2355555555555542111134578888899999999988
Q ss_pred ccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHH
Q psy15447 359 HKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMN 438 (457)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~ 438 (457)
...+.+. ++.+.++|+.+.+ ..+++++|+++||.+.++..+. ....+++|++++. ..++ +
T Consensus 264 ---~~~~~~~-~~~~~f~~~~~~~----------~~~l~~~l~~~gi~v~pg~~f~---~~~~~~iRi~~~~--~~~~-~ 323 (330)
T TIGR01140 264 ---LGGLEVV-GGTALFLLVRTPD----------AAALHEALARRGILIRDFDNFP---GLDPRYLRFALPT--DEEN-D 323 (330)
T ss_pred ---CCCceEC-CCCCeEEEEEcCC----------HHHHHHHHHHCCEEEEECCCCC---CCCCCEEEEEecC--HHHH-H
Confidence 3335553 4456777776543 2478999999999999887531 1234799999863 3344 8
Q ss_pred HHHHHHH
Q psy15447 439 SLIETLC 445 (457)
Q Consensus 439 ~~~~~l~ 445 (457)
+++++|+
T Consensus 324 ~~~~~l~ 330 (330)
T TIGR01140 324 RLEEALA 330 (330)
T ss_pred HHHHhhC
Confidence 8877763
No 243
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=3.2e-23 Score=204.44 Aligned_cols=212 Identities=17% Similarity=0.212 Sum_probs=173.5
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~ 198 (457)
..+...+|+++||++.|.+.+++++||++|+..++.+++++||.|++..+.|+++.. .+...|.++..++..|+++
T Consensus 62 ~~p~~~~le~~lA~l~g~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e~ 141 (398)
T PRK08249 62 TNPTVQAFEEKVRILEGAEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHEQ 141 (398)
T ss_pred CChHHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHHH
Confidence 467789999999999999999999999999999999999999999999999987543 2456688888888889999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.+++ ++++|++|+++||+|.+.|+++|.++|++||+++|+|++|+.+.... .+ ..+
T Consensus 142 l~~~i~~-----------~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~---------~l-~~~ 200 (398)
T PRK08249 142 IEAEIAK-----------GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQN---------PL-ALG 200 (398)
T ss_pred HHHhcCC-----------CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCC---------ch-hhC
Confidence 9888853 45799999999999999999999999999999999999987543221 01 134
Q ss_pred ccEEEecCcccccC----cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS 354 (457)
Q Consensus 279 ~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~ 354 (457)
+|+++.|++|.+|+ .||++++++++++.++... ...+..++|..++.++..++.+. .++++..+++..+.+
T Consensus 201 ~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~--~~~g~~~s~~~a~l~l~~l~tL~---~R~~~~~~na~~la~ 275 (398)
T PRK08249 201 ADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYR--EINGATMDPMSAYLILRGMKTLK---LRVRQQQESAMALAK 275 (398)
T ss_pred CCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHH--HhcCCCCCHHHHHHHHhCcchHH---HHHHHHHHHHHHHHH
Confidence 58999999999974 3688899988888776433 23445678988888888877664 366888899999999
Q ss_pred Hhhccc
Q psy15447 355 LLSQHK 360 (457)
Q Consensus 355 ~L~~~~ 360 (457)
.|++++
T Consensus 276 ~L~~~p 281 (398)
T PRK08249 276 YLQTHP 281 (398)
T ss_pred HHHcCC
Confidence 998844
No 244
>PRK14012 cysteine desulfurase; Provisional
Probab=99.93 E-value=6.6e-23 Score=204.35 Aligned_cols=334 Identities=15% Similarity=0.150 Sum_probs=215.4
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHH---hcCCCCCCCC-CcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCID---KNGVGSCGPR-GFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSA 154 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~---~~~~~~~~~~-~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~ 154 (457)
-|+|.++..+ .++.+.+++.+.+. .++....... ......+...++++.+++++|.+ .++++++|++++.
T Consensus 5 iyld~a~~~~----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~ 80 (404)
T PRK14012 5 IYLDYSATTP----VDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDN 80 (404)
T ss_pred EEecCcCCCC----CCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHH
Confidence 4666665321 35788899888876 2222111010 00112356778999999999975 3778888889988
Q ss_pred HHHHhh----cCCCCEEEEeCcccHHHHHHH---HhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447 155 SAIAAY----VKRNDAVFVDENINFAIQTGL---IASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFII 222 (457)
Q Consensus 155 ~ai~a~----~~~gd~v~~~~~~h~~~~~~~---~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi 222 (457)
.++.++ .++||.|++....|.+..... ...|.++..++.+ |++++++.+.+ ++++|+
T Consensus 81 ~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~~-----------~t~lv~ 149 (404)
T PRK14012 81 LAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMRD-----------DTILVS 149 (404)
T ss_pred HHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcCC-----------CCEEEE
Confidence 887765 378999999999998775544 3358787776542 78888888753 457999
Q ss_pred EecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecH
Q psy15447 223 VEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSS 301 (457)
Q Consensus 223 ~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~ 301 (457)
+.+++|++|.+.|+++|.++|++||+++|+|++|++|... .++...++|+++.|++|.+|+.| |+++.++
T Consensus 150 ~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~g~G~l~~~~ 220 (404)
T PRK14012 150 IMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVP---------IDLSKLKVDLMSFSAHKIYGPKGIGALYVRR 220 (404)
T ss_pred EECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcc---------cCcccCCCCEEEEehhhccCCCceEEEEEec
Confidence 9999999999999999999999999999999999876542 11222346899999999887655 6666655
Q ss_pred HHHHHHHhhCC------cceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC--C
Q psy15447 302 YIIEHHRLSGS------GYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR--D 372 (457)
Q Consensus 302 ~~~~~~~~~~~------~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~--~ 372 (457)
+....+..... .+. .++.+.....+..++++.++.. .+..++.+++.+++.+.|++ ++++.+.++. .
T Consensus 221 ~~~~~~~~~~~g~~~~~~~~-~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~---~~~i~~~~~~~~~ 296 (404)
T PRK14012 221 KPRVRLEAQMHGGGHERGMR-SGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKD---IEEVYLNGDLEQR 296 (404)
T ss_pred CCCCCCCceecCCCccCCcc-CCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc---CCCEEEeCCcccc
Confidence 43222211000 011 1223333334444555554332 34567788889999998887 5666654321 1
Q ss_pred -CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccc----------c----CCCCCeEEEEecCCCCHHHH
Q psy15447 373 -TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQE----------A----KKQKPSIRITCNISHTEQDM 437 (457)
Q Consensus 373 -~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~----------~----~~~~~~lRi~~~~~~t~edi 437 (457)
.+...+.+.... ..++...|. ++.+..+.++... . ....+.+|++++..+|++|+
T Consensus 297 ~~~~~~~~~~~~~--------~~~~~~~l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dv 366 (404)
T PRK14012 297 VPGNLNVSFNYVE--------GESLIMALK--DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEI 366 (404)
T ss_pred CCCEEEEEEeCcC--------HHHHHHhCC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHH
Confidence 222223222111 124555554 5555544332110 0 01247899999999999999
Q ss_pred HHHHHHHHHHHHHhc
Q psy15447 438 NSLIETLCKSHDIAV 452 (457)
Q Consensus 438 ~~~~~~l~~~~~~~~ 452 (457)
|+++++|+++++.++
T Consensus 367 d~~~~~l~~~~~~~~ 381 (404)
T PRK14012 367 DYAIELVRKSIGKLR 381 (404)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999887663
No 245
>PRK08354 putative aminotransferase; Provisional
Probab=99.93 E-value=1.9e-22 Score=193.72 Aligned_cols=295 Identities=13% Similarity=0.091 Sum_probs=193.5
Q ss_pred eeeEEeecC-CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHH
Q psy15447 80 IPCINFATH-NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIA 158 (457)
Q Consensus 80 ~~~id~~s~-~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~ 158 (457)
..++||+.| +++ ++|.+.+++.+.+.... . + +....|++.+++++|. ++++++++++++..++.
T Consensus 8 ~~~i~l~~~~np~---~p~~~~~a~~~~~~~~~-~---y-------p~~~~l~~~ia~~~~~-~I~vt~G~~~al~~~~~ 72 (311)
T PRK08354 8 EGLIDFSASVNPY---PPEWLDEMFERAKEISG-R---Y-------TYYEWLEEEFSKLFGE-PIVITAGITEALYLIGI 72 (311)
T ss_pred cceeEecCCCCCC---CCHHHHHHHHHHHHHhh-c---C-------CChHHHHHHHHHHHCC-CEEECCCHHHHHHHHHH
Confidence 468999987 443 24788888887765421 1 1 1236789999999885 45555566688776664
Q ss_pred hhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---
Q psy15447 159 AYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP--- 235 (457)
Q Consensus 159 a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~--- 235 (457)
+..+||.|++..++|..+...++..|.++..++ .|++.+++.+++ .+++++.+++||+|.+.+
T Consensus 73 -~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~-~d~~~l~~~~~~------------~~~vi~~~P~NPTG~~~~~~~ 138 (311)
T PRK08354 73 -LALRDRKVIIPRHTYGEYERVARFFAARIIKGP-NDPEKLEELVER------------NSVVFFCNPNNPDGKFYNFKE 138 (311)
T ss_pred -hhCCCCeEEEeCCCcHHHHHHHHHcCCEEeecC-CCHHHHHHhhcC------------CCEEEEecCCCCCCCccCHHH
Confidence 445899999999999999999999999887764 478888776642 235666677899999998
Q ss_pred hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCC
Q psy15447 236 LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGS 312 (457)
Q Consensus 236 l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~ 312 (457)
+++|.++|++||+++|+||+|....++. .. ..+++ .|+++||||++|.+| ||+++ ..+.++....
T Consensus 139 l~~l~~~a~~~~~~li~De~y~~f~~~~--~~------~~~~~-vi~~~S~SK~~~l~GlRiG~~v~---~~~~l~~~~~ 206 (311)
T PRK08354 139 LKPLLDAVEDRNALLILDEAFIDFVKKP--ES------PEGEN-IIKLRTFTKSYGLPGIRVGYVKG---FEEAFRSVRM 206 (311)
T ss_pred HHHHHHHhhhcCcEEEEeCcchhccccc--cc------cCCCc-EEEEeccHhhcCCccceeeeeee---hHHHHHHcCC
Confidence 5677888899999999999997544432 11 11223 589999999998766 99888 4455544332
Q ss_pred cceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHH
Q psy15447 313 GYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKL 392 (457)
Q Consensus 313 ~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 392 (457)
.+ +.+....+++.+.++ .. .++++++.+.+++..+.+ .+... .++.+.++++.+.+
T Consensus 207 ~~----~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~l---~~~l~-~~~~~~~~~~~~~~---------- 262 (311)
T PRK08354 207 PW----SIGSTGYAFLEFLIE---DD---FEHLRKTMPLIWREKERF---EKALY-VKSDANFFIKDVGD---------- 262 (311)
T ss_pred Cc----cCCHHHHHHHHHHHH---hH---HHHHHHHHHHHHHHHHHH---HHhcC-CCCCCcEEEEECCC----------
Confidence 22 223333333333222 11 122233333333332221 01111 13456666554432
Q ss_pred HHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 393 LQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 393 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
..++++.|.++||.++++..+ ..++++||++. +.++.++++++++++
T Consensus 263 ~~~~~~~l~~~gv~v~~g~~f-----~~~~~iRi~~~---~~~~~~~l~~al~~~ 309 (311)
T PRK08354 263 AEKFVEFLKRNGILVRDCTSF-----GLPGYIRFSVR---DREENEKLIRALREW 309 (311)
T ss_pred HHHHHHHHHHCCeEEEecccC-----CCCCeEEEEeC---CHHHHHHHHHHHHHh
Confidence 246888899999999988753 22579999996 678888899988875
No 246
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.93 E-value=1e-22 Score=202.79 Aligned_cols=336 Identities=13% Similarity=0.085 Sum_probs=211.7
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc---C--CCcEEEecccHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM---G--LEETALYSFGFSTS 153 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~---g--~~~~i~~~sG~~a~ 153 (457)
|..++|+..++. .+...|.+.+++.+.+++...... ...|+...-..+|++.+|+++ + .+++++++++.+++
T Consensus 32 ~~~~i~l~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~--~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al 108 (402)
T TIGR03542 32 SADIIRLGIGDT-TQPLPASVIEAFHNAVDELASEET--FRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDV 108 (402)
T ss_pred CCCeEEcCCCCC-CCCCCHHHHHHHHHHHhccccccc--ccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHH
Confidence 567899988754 334467889999888876321100 001222223355666666643 2 33455555555777
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCC-----------eEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRC-----------KVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFII 222 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~-----------~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi 222 (457)
... ..++.+||.|++..++|..+...++..|. ++..++..+.+.+...+.+ ..++++|+
T Consensus 109 ~~l-~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---------~~~~~~i~ 178 (402)
T TIGR03542 109 FRL-QSLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE---------EPKIDIIY 178 (402)
T ss_pred HHH-HHhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc---------cCCceEEE
Confidence 664 45668999999999999988888888888 7776654321111111111 02456777
Q ss_pred EecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC-CCccEEEecCcccccCcc---c
Q psy15447 223 VEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST-EEVDMIIGSLEHALGSVG---G 295 (457)
Q Consensus 223 ~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~-~~~Di~~~s~sK~lg~~g---G 295 (457)
+.+++||||.+.+ +++|.++|++||+++|+||+|+...++..-. .....++. .+..|+++||||.+|.+| |
T Consensus 179 l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~--~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG 256 (402)
T TIGR03542 179 LCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLP--HSIFEIPGAKECAIEFRSFSKTAGFTGVRLG 256 (402)
T ss_pred EeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCC--cchhhCCCCcccEEEEecCccccCCCCcceE
Confidence 7799999999999 7789999999999999999997544332111 11111211 123488999999998666 9
Q ss_pred EEEecHHHH--------HHHHhhCCcceecCCCcHHHHHHHHHHHHH--HhhCcHHHHHHHHHHHHHHHHhhcccccCCe
Q psy15447 296 FCVGSSYII--------EHHRLSGSGYCFSASLPPFLAVAANKALHL--LKANPSLLTKLREKCNTMHSLLSQHKVTQRF 365 (457)
Q Consensus 296 ~v~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~--~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~ 365 (457)
|++++++++ ..+.... ...+. +.+.+...++.+.+.. .....+.++.++++.+.+.+.|++ .++
T Consensus 257 ~~i~~~~l~~~~~~~~~~~~~~~~-~~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~ 330 (402)
T TIGR03542 257 WTVVPKELTYADGHSVIQDWERRQ-CTKFN-GASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEA----AGF 330 (402)
T ss_pred EEEecHHHhhcchhhHHHHHHHHh-hhccc-CCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHh----cCc
Confidence 999998876 2221111 11121 2355554444444421 111123456677888889899988 466
Q ss_pred EEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447 366 LVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL 444 (457)
Q Consensus 366 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l 444 (457)
.+..+.+++++|+.++... ...++++.|++ +||.+.++..+. ....+++||++. .++++++++++.|
T Consensus 331 ~~~~~~~~~f~~v~l~~~~-------~~~~l~~~l~~~~gv~v~pg~~f~---~~~~~~iRis~~--~~~~~l~~~l~~l 398 (402)
T TIGR03542 331 KVYGGEHAPYLWVKTPEGI-------SSWDFFDFLLYQYHVVGTPGSGFG---PSGEGFVRFSAF--GKRENIVEACERI 398 (402)
T ss_pred eecCCCceeEEEEECCCCC-------CHHHHHHHHHHhCCEEEeCchhhC---CCCCCEEEEEec--CCHHHHHHHHHHH
Confidence 6654446778899887543 34578888774 699999875431 123579999964 3789999999988
Q ss_pred HHH
Q psy15447 445 CKS 447 (457)
Q Consensus 445 ~~~ 447 (457)
+++
T Consensus 399 ~~~ 401 (402)
T TIGR03542 399 KEA 401 (402)
T ss_pred Hhh
Confidence 765
No 247
>PLN02651 cysteine desulfurase
Probab=99.92 E-value=5e-23 Score=202.40 Aligned_cols=311 Identities=15% Similarity=0.110 Sum_probs=213.2
Q ss_pred ChhhHHHHHHHHHhc-CCCCC-CCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhh----cCCCCEE
Q psy15447 96 NPDIEKCAIDCIDKN-GVGSC-GPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIAAY----VKRNDAV 167 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~-~~~~~-~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~----~~~gd~v 167 (457)
++.+.+++.+.+... +.... .........+..+++++.+++++|.+ .++++++|++++..++.++ .++||.|
T Consensus 12 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~v 91 (364)
T PLN02651 12 DPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHV 91 (364)
T ss_pred CHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEE
Confidence 578889988887653 22111 01001112456788999999999965 4566777888877776543 4789999
Q ss_pred EEeCcccHHHHHHH---HhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHH
Q psy15447 168 FVDENINFAIQTGL---IASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDI 239 (457)
Q Consensus 168 ~~~~~~h~~~~~~~---~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i 239 (457)
++....|++..... ...|.++..++.+ |++++++.+++ +++++++.++++++|.+.|+++|
T Consensus 92 l~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~-----------~t~lv~v~~~~n~tG~~~~l~~I 160 (364)
T PLN02651 92 ITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIRP-----------DTALVSVMAVNNEIGVIQPVEEI 160 (364)
T ss_pred EEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCC-----------CcEEEEEECCCCCceecccHHHH
Confidence 99998888765443 3457777766542 67888887743 46789999999999999999999
Q ss_pred HHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhhCCc-----
Q psy15447 240 LSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLSGSG----- 313 (457)
Q Consensus 240 ~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~~~~----- 313 (457)
.++|++||+++++|++|+.|... +++...++|+++.|.+|++|+.| |+++.+++..+.+.....+
T Consensus 161 ~~~~~~~g~~~~vD~a~~~g~~~---------~~~~~~~~D~~~~s~hK~~gp~G~g~l~v~~~~~~~l~p~~~g~~~~~ 231 (364)
T PLN02651 161 GELCREKKVLFHTDAAQAVGKIP---------VDVDDLGVDLMSISGHKIYGPKGVGALYVRRRPRVRLEPLMSGGGQER 231 (364)
T ss_pred HHHHHHcCCEEEEEcchhhCCcc---------cCcccCCCCEEEechhhhCCCCceEEEEEcCCCCCCCCccccCCCccC
Confidence 99999999999999999876542 23333457999999999866555 7777776554433221110
Q ss_pred ceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC--C---CCeEEEEecCCcchH
Q psy15447 314 YCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR--D---TPLKYLYLQKSDDEV 387 (457)
Q Consensus 314 ~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~--~---~~~~~i~~~~~~~~~ 387 (457)
....++.+...+.+..++++++.+. +...++.+++.+++.+.|++. ++++++.++. . ..++.+.+...
T Consensus 232 ~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~--~~~~~i~~~~~~~~~~~~i~~~~~~~~---- 305 (364)
T PLN02651 232 GRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAK--LGGVRVNGPRDPEKRYPGTLNLSFAYV---- 305 (364)
T ss_pred CccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhh--CCCEEEECCCCcccCcCCEEEEEeCCC----
Confidence 0123345666667777888887654 345678888888998888741 3588887641 1 34777766543
Q ss_pred HHHHHHHHHHHHHHHcCeeEeccccCcccc----------CC----CCCeEEEEecCCCCHHHHH
Q psy15447 388 ASKKLLQTICDMCIQAGFAITCPSHLDQEA----------KK----QKPSIRITCNISHTEQDMN 438 (457)
Q Consensus 388 ~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~----------~~----~~~~lRi~~~~~~t~edi~ 438 (457)
...++.+.|.+ |.++.+.+|.... .. ..+.+|++++..+|++|||
T Consensus 306 ----~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 306 ----EGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred ----CHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 34577777754 8887766553310 00 1368999999999999985
No 248
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.92 E-value=8.3e-23 Score=206.77 Aligned_cols=312 Identities=10% Similarity=0.094 Sum_probs=204.9
Q ss_pred ccChHHHHHHHHHHHhhcC------CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHH-hcCCeEEEecC
Q psy15447 121 YGTNVVHLDLENDIASFMG------LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLI-ASRCKVQYFKH 193 (457)
Q Consensus 121 ~g~~~~~~~l~~~la~~~g------~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~-~~g~~~~~~~~ 193 (457)
.|..++..++++.+.+..| .+++++++++++|+..++.+++++||.|++..++|..+...+. ..|.+++.++.
T Consensus 94 ~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~ 173 (496)
T PLN02376 94 HGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPC 173 (496)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeC
Confidence 4555555555555555434 2345566666689999999999999999999999999887777 47888888765
Q ss_pred C-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccC
Q psy15447 194 N-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGS 263 (457)
Q Consensus 194 ~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~ 263 (457)
. |++++++.++..... ..+++++++.+++||+|.+.+ +++|.++|++||++||+||+|+...+..
T Consensus 174 ~~~~~~~~~~~~le~a~~~a~~~-----~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~ 248 (496)
T PLN02376 174 SSSDNFKLTVDAADWAYKKAQES-----NKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAG 248 (496)
T ss_pred CCCccCcCCHHHHHHHHHHHHhc-----CCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCC
Confidence 2 567777665432110 135567777889999999998 6688889999999999999998655432
Q ss_pred C-CCcccccc---CC---CCCCccEEEecCcccccCcc---cEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHH
Q psy15447 264 T-GHGVTEYF---GV---STEEVDMIIGSLEHALGSVG---GFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKAL 332 (457)
Q Consensus 264 ~-g~~~~~~~---~~---~~~~~Di~~~s~sK~lg~~g---G~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l 332 (457)
. ...+.+.. +. .+ +..+++.||||.||.+| ||+++ ++.+.+.++... . ++ ..+.+...++.+.+
T Consensus 249 ~~~~si~~l~~~~~~~~~~~-~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~-~--~~-~vs~~~Q~a~~~~L 323 (496)
T PLN02376 249 GDFVSVAEVVNDVDISEVNV-DLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMS-S--FG-LVSSQTQLMLASML 323 (496)
T ss_pred CCcccHHHhhccccccccCC-CeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHh-h--cC-CCCHHHHHHHHHHh
Confidence 1 11111111 11 11 12256799999998666 99998 466656554322 1 22 23444444444443
Q ss_pred HH---Hhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeE
Q psy15447 333 HL---LKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAI 407 (457)
Q Consensus 333 ~~---~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v 407 (457)
+. +++ ..+.+++++++.+.+.+.|++ .|+.+..+..+.++|+.++.............++++.+.++ ||.+
T Consensus 324 ~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~----~gi~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v 399 (496)
T PLN02376 324 SDDQFVDNFLMESSRRLGIRHKVFTTGIKK----ADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNV 399 (496)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEE
Confidence 21 111 123466777888888888887 56666555567888988854210000001234688888775 9999
Q ss_pred eccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 408 TCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 408 ~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
.++..+.. ..++++|+++.. .++++++..++.|++++..
T Consensus 400 ~pGs~F~~---~~~g~~Ri~fa~-~~~~~l~~al~rl~~~l~~ 438 (496)
T PLN02376 400 SPGSSFRC---TEPGWFRICFAN-MDDDTLHVALGRIQDFVSK 438 (496)
T ss_pred eCccccCC---CCCCEEEEEeeC-CCHHHHHHHHHHHHHHHHH
Confidence 98765321 235799999974 5689999999999998864
No 249
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.92 E-value=8.3e-23 Score=206.10 Aligned_cols=314 Identities=12% Similarity=0.071 Sum_probs=205.9
Q ss_pred ccChHHHHHHHHHHHhhcC------CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHH-hcCCeEEEecC
Q psy15447 121 YGTNVVHLDLENDIASFMG------LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLI-ASRCKVQYFKH 193 (457)
Q Consensus 121 ~g~~~~~~~l~~~la~~~g------~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~-~~g~~~~~~~~ 193 (457)
.|..++..++++.+.+.+| .+++++++++++++..++.+++++||.|++..++|..+...+. ..|.+++.++.
T Consensus 86 ~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~ 165 (468)
T PLN02450 86 HGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHC 165 (468)
T ss_pred CChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEec
Confidence 3444555555555544333 2244555555688999999999999999999999988877777 47888887763
Q ss_pred C-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccC
Q psy15447 194 N-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGS 263 (457)
Q Consensus 194 ~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~ 263 (457)
. |++++++.+++.... ..+++++++.+++||+|.+.+ +++|.++|++||+++|+||+|+...+..
T Consensus 166 ~~~~~~~~~~~~le~~~~~~~~~-----~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~ 240 (468)
T PLN02450 166 SSSNGFQITESALEEAYQQAQKL-----NLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDS 240 (468)
T ss_pred CCccCCcCCHHHHHHHHHHHHhc-----CCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCC
Confidence 2 567888877653210 134567777789999999998 6688888999999999999998544432
Q ss_pred C-CCcccccc------CCCCCCccEEEecCcccccCcc---cEEEecHH-HHHHHHhhCCcceecCCCcHHHHHHHHHHH
Q psy15447 264 T-GHGVTEYF------GVSTEEVDMIIGSLEHALGSVG---GFCVGSSY-IIEHHRLSGSGYCFSASLPPFLAVAANKAL 332 (457)
Q Consensus 264 ~-g~~~~~~~------~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l 332 (457)
. ........ +..+.+..++++||||.+|.+| ||+++++. +++.+.... . ++ ..+.+...++.+.|
T Consensus 241 ~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~-~--~~-~~s~~~Q~a~~~~L 316 (468)
T PLN02450 241 PGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMS-S--FG-LVSSQTQYLLSALL 316 (468)
T ss_pred CCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHh-h--cC-CCCHHHHHHHHHHh
Confidence 1 11111111 1111223488999999998665 99999744 555544332 1 22 23555555555554
Q ss_pred HHH---h-hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH-cCeeE
Q psy15447 333 HLL---K-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ-AGFAI 407 (457)
Q Consensus 333 ~~~---~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v 407 (457)
+.- + ...+.+++++++.+.+.+.|++ .|+.+..+..+.++|+.++...... ......++.+.|++ +||.+
T Consensus 317 ~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~----~gi~~~~~~~g~flwi~l~~~~~~~-~~~~~~~l~~~ll~~~gV~v 391 (468)
T PLN02450 317 SDKKFTKNYLEENQKRLKQRQKKLVSGLEA----AGIKCLKSNAGLFCWVDMRHLLKSN-TFEAEMELWKKIVYEVKLNI 391 (468)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHH----cCCcccCCCceEEEEEEchHhcCcC-CchHHHHHHHHHHHhCCEEE
Confidence 321 1 1123567888888899999988 4776654455668888875321100 00122456777765 69999
Q ss_pred eccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 408 TCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 408 ~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
.|+..+.. ...+++|++++. .++++++++++.|++++....
T Consensus 392 ~PG~~f~~---~~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 392 SPGSSCHC---TEPGWFRVCFAN-MSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred eCccccCC---CCCCEEEEEecC-CCHHHHHHHHHHHHHHHHhcc
Confidence 98864321 235799999975 578999999999999887654
No 250
>PLN02231 alanine transaminase
Probab=99.92 E-value=5.3e-22 Score=202.08 Aligned_cols=342 Identities=12% Similarity=0.112 Sum_probs=218.9
Q ss_pred hhhHHHHHHHHHhc-CCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHHHHHHHhhc-CCCCEEEEe
Q psy15447 97 PDIEKCAIDCIDKN-GVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTSASAIAAYV-KRNDAVFVD 170 (457)
Q Consensus 97 p~i~~a~~~~l~~~-~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~~~ai~a~~-~~gd~v~~~ 170 (457)
.++++++.+.+... +.....+....|..++.+.+++.+.+..| .+++++++++++|+..++.+++ .+||.|++.
T Consensus 143 ~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~ 222 (534)
T PLN02231 143 ADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCP 222 (534)
T ss_pred HHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEe
Confidence 45666666666543 21222233345566666666666655445 2455666667789999999987 479999999
Q ss_pred CcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHH
Q psy15447 171 ENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDIL 240 (457)
Q Consensus 171 ~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~ 240 (457)
.+.|..+...+...|.+++.++. .|+++|++.+++.... ..+++++++.+++||||.+.+ +++|.
T Consensus 223 ~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~-----~~~~k~ivl~nP~NPTG~vls~e~l~~Iv 297 (534)
T PLN02231 223 IPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSK-----GITVRALVVINPGNPTGQVLAEENQRDIV 297 (534)
T ss_pred CCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhc-----CCCeEEEEEeCCCCCCCcCCCHHHHHHHH
Confidence 99999999999999988877653 2688999888753310 124567667788999999988 67999
Q ss_pred HHHHHcCcEEEEEcCcccccccCCCC--ccccc---cCCCCCC-ccEEEecCcccc-c---CcccEEEe---cHHHHHHH
Q psy15447 241 SLRSKYQARIFVDESVSFGTLGSTGH--GVTEY---FGVSTEE-VDMIIGSLEHAL-G---SVGGFCVG---SSYIIEHH 307 (457)
Q Consensus 241 ~l~~~~g~~li~DEa~~~g~~g~~g~--~~~~~---~~~~~~~-~Di~~~s~sK~l-g---~~gG~v~~---~~~~~~~~ 307 (457)
++|++||++||+||+|....+..... .+... .|....+ .-|+++|+||.+ | .++||+++ ++++++.+
T Consensus 298 ~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l 377 (534)
T PLN02231 298 EFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQI 377 (534)
T ss_pred HHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHH
Confidence 99999999999999998665521111 11111 1111111 247889999976 4 35599875 67888877
Q ss_pred HhhCCcceecCCCcHHHHHHHHHHHH-----------HHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeE
Q psy15447 308 RLSGSGYCFSASLPPFLAVAANKALH-----------LLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLK 376 (457)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~aaa~a~l~-----------~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 376 (457)
..... .... .+....+++...++ ++++.+.+++.++++.+.+.+.|++ .+|+.+..+.++.++
T Consensus 378 ~k~~~-~~~~--s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~---~~gi~~~~p~Ggfyl 451 (534)
T PLN02231 378 YKVAS-VNLC--SNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNS---LEGVTCNKAEGAMYL 451 (534)
T ss_pred HHHHh-hhcC--CChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCceecCCCeeeEE
Confidence 65432 1121 23333333333331 1112223567888999999999988 468888755566666
Q ss_pred EEEecCCcc-hHHHH----HHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 377 YLYLQKSDD-EVASK----KLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 377 ~i~~~~~~~-~~~~~----~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
|..+..+.. .+... .....++.+|++ .||.+.|+..+.. ..+..++|+++. .+++++++.++.|.++++.
T Consensus 452 w~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~--~~g~~~~Rit~~--~~~e~l~eal~RL~~~~~~ 527 (534)
T PLN02231 452 FPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQ--VPGTWHFRCTIL--PQEDKIPAIVSRLTEFHKS 527 (534)
T ss_pred eccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCC--CCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 644432210 00000 012235666664 5999999875421 123457999984 5899999999999998876
Q ss_pred hcC
Q psy15447 451 AVQ 453 (457)
Q Consensus 451 ~~~ 453 (457)
+-.
T Consensus 528 ~~~ 530 (534)
T PLN02231 528 FMD 530 (534)
T ss_pred HHH
Confidence 643
No 251
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.92 E-value=5.5e-23 Score=204.71 Aligned_cols=336 Identities=11% Similarity=0.005 Sum_probs=210.2
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcC--CCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEE--ecccH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNG--VGSCGPRGFYGTNVVHLDLENDIASFMG----LEETAL--YSFGF 150 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~--~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~--~~sG~ 150 (457)
++..+|++.+.+....+++...+++.+++.+.. .....+....|..++++++++.+.+..+ .+++++ +.+|+
T Consensus 28 ~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~ 107 (404)
T PTZ00376 28 SPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGT 107 (404)
T ss_pred CcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcc
Confidence 346788887764334444445555555553311 0111222234554444444444433221 223332 55666
Q ss_pred HHHHHHH---HhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC---C----CHHHHHHHHHhhchhcccCCCCccEE
Q psy15447 151 STSASAI---AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH---N----NMQHLEELLRQQDERDTLNSKVTKKF 220 (457)
Q Consensus 151 ~a~~~ai---~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~---~----d~~~le~~l~~~~~~~~~~~~~~~~~ 220 (457)
+|...++ .+++++||.|++..++|..+...++..|.+++.++. + |++.+++.+++.. +++++
T Consensus 108 ~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~--------~~~~~ 179 (404)
T PTZ00376 108 GALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAP--------NGSVV 179 (404)
T ss_pred hHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCC--------CCCEE
Confidence 7766655 467899999999999999999999999999988875 2 6888888886532 24568
Q ss_pred EEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCC-Cc-cccccCCCCCCccEEEecCcccccCcc-
Q psy15447 221 IIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTG-HG-VTEYFGVSTEEVDMIIGSLEHALGSVG- 294 (457)
Q Consensus 221 vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g-~~-~~~~~~~~~~~~Di~~~s~sK~lg~~g- 294 (457)
+++.+++||||.+.+ +++|.++|++||+++|+||+|....++... .. ....+.-..++ .|+++||||.+|.+|
T Consensus 180 ~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~-vi~i~SfSK~~~~~Gl 258 (404)
T PTZ00376 180 LLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVE-FLVAQSFSKNMGLYGE 258 (404)
T ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCc-EEEEEeCCCccccccc
Confidence 888999999999988 668888999999999999998754442100 00 01111101123 488999999998655
Q ss_pred --cEE---EecHHHHHHHHhhC---CcceecCCCcHHHHHHHHHHHHHH-------hhCcHHHHHHHHHHHHHHHHhhcc
Q psy15447 295 --GFC---VGSSYIIEHHRLSG---SGYCFSASLPPFLAVAANKALHLL-------KANPSLLTKLREKCNTMHSLLSQH 359 (457)
Q Consensus 295 --G~v---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~aaa~a~l~~~-------~~~~~~~~~l~~~~~~l~~~L~~~ 359 (457)
||+ ++++++++.+.... ....++ +.+++...++.+.++.- +...+.+++++++.+.+.+.|++.
T Consensus 259 RvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 337 (404)
T PTZ00376 259 RIGALHIVCANKEEAANVLSQLKLIIRPMYS-SPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKAL 337 (404)
T ss_pred ccceEEEEeCCHHHHHHHHHHHHHHHhhhcC-CCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 997 57876555442211 111222 23555555555555321 111234567888899999999883
Q ss_pred cccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHH
Q psy15447 360 KVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMN 438 (457)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~ 438 (457)
....++.+..+.++.++|+.+. .+++++|.++ ||++.++ + |++++. .+.++++
T Consensus 338 ~~~~~~~~~~p~gg~f~~~~~~------------~~~~~~L~~~~~v~v~p~-----------~--Ris~~~-~~~~~~~ 391 (404)
T PTZ00376 338 GSPGDWEHIINQIGMFSFTGLT------------KEQVERLIEKYHIYLLDN-----------G--RISVAG-LTSKNVD 391 (404)
T ss_pred CCCCcccccccCceEEEecCCC------------HHHHHHHHHhCCEeecCC-----------C--eEEEec-cCHHhHH
Confidence 1111244433445566666542 2577788877 9988642 2 999854 7999999
Q ss_pred HHHHHHHHHHHH
Q psy15447 439 SLIETLCKSHDI 450 (457)
Q Consensus 439 ~~~~~l~~~~~~ 450 (457)
+++++|++++..
T Consensus 392 ~~~~~l~~~~~~ 403 (404)
T PTZ00376 392 YVAEAIHDVVRN 403 (404)
T ss_pred HHHHHHHHHHhc
Confidence 999999988653
No 252
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.92 E-value=4.1e-23 Score=201.82 Aligned_cols=281 Identities=15% Similarity=0.158 Sum_probs=197.6
Q ss_pred cChHHHHHHHHHHHhhcCCC----cEEEecccHHHHHHHHHhhcC------------C--CCEEEEeCcccHHHHHHHHh
Q psy15447 122 GTNVVHLDLENDIASFMGLE----ETALYSFGFSTSASAIAAYVK------------R--NDAVFVDENINFAIQTGLIA 183 (457)
Q Consensus 122 g~~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~~ai~a~~~------------~--gd~v~~~~~~h~~~~~~~~~ 183 (457)
+..+..+++.+.+++++|.+ ..+++++|++|+..++.+++. + ++.|+.+..+|.+....+..
T Consensus 35 ~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~ 114 (345)
T cd06450 35 AATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAY 114 (345)
T ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHH
Confidence 34566666777777888864 578889999999999887642 2 34788899999998888888
Q ss_pred cCCeEEEec-----CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCccc
Q psy15447 184 SRCKVQYFK-----HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSF 258 (457)
Q Consensus 184 ~g~~~~~~~-----~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~ 258 (457)
.|.+++.++ ..|++++++.+.+.... ..+++++++..+++++|.+.|+++|.++|++||+++++|++|+.
T Consensus 115 ~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~-----~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~ 189 (345)
T cd06450 115 LDVKVRLVPVDEDGRMDPEALEAAIDEDKAE-----GLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGG 189 (345)
T ss_pred HhcCeEEeeeCCCCCcCHHHHHHHHHHHHHC-----CCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhH
Confidence 888877765 34799999988653211 12456777788888999999999999999999999999999987
Q ss_pred ccccCC-CCccccccCCCCCCccEEEecCcccccCc--ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH
Q psy15447 259 GTLGST-GHGVTEYFGVSTEEVDMIIGSLEHALGSV--GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL 335 (457)
Q Consensus 259 g~~g~~-g~~~~~~~~~~~~~~Di~~~s~sK~lg~~--gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~ 335 (457)
+.+... .... ..+. .++|.++.|++|+++++ .|++..+ . .+..++++.+
T Consensus 190 ~~~~~~~~~~~--~~~~--~~~d~~~~s~~K~l~~p~g~g~~~~~---------------------~---~~~~~~l~~l 241 (345)
T cd06450 190 FLLPFPEPRHL--DFGI--ERVDSISVDPHKYGLVPLGCSAVLVR---------------------A---LKLWATLRRF 241 (345)
T ss_pred HHhhChhhHHH--hcCc--cccCEEEEchhHhhCCCcchHHHHHH---------------------H---HHHHHHHHHH
Confidence 764211 1111 1111 35788888999988543 2444333 2 2223334433
Q ss_pred hh--CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccC
Q psy15447 336 KA--NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHL 413 (457)
Q Consensus 336 ~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~ 413 (457)
.. .++.+++..++.+++.+.|++ .+++.+..++..+++.+.+..... ......++.++|.++|+++.+...
T Consensus 242 ~~~g~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~~iv~f~~~~~~~---~~~~~~~i~~~L~~~g~~~~~~~~- 314 (345)
T cd06450 242 GRDGYGEHIDRIVDLAKYLAELIRA---DPGFELLGEPNLSLVCFRLKPSVK---LDELNYDLSDRLNERGGWHVPATT- 314 (345)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhc---CCCeEEecCCceeEEEEEECCcch---hhHHHHHHHHHHHhcCCEEEEeeE-
Confidence 32 245778888999999999988 567777655667888887765200 001456799999999655443221
Q ss_pred ccccCCCCCeEEEEecCCC-CHHHHHHHHHHHHH
Q psy15447 414 DQEAKKQKPSIRITCNISH-TEQDMNSLIETLCK 446 (457)
Q Consensus 414 ~~~~~~~~~~lRi~~~~~~-t~edi~~~~~~l~~ 446 (457)
...+.++|++++..+ |++|+++++++|++
T Consensus 315 ----~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 315 ----LGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred ----ECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 113568999998875 99999999999975
No 253
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.92 E-value=1.5e-22 Score=199.62 Aligned_cols=211 Identities=17% Similarity=0.176 Sum_probs=167.4
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~ 198 (457)
..+...++++++++++|.+.+++++||++|+..++.+++++||.|+++...|+++.. .+...|.++..++..|+++
T Consensus 59 ~~p~~~~le~~la~l~g~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~ 138 (390)
T PRK08133 59 TNPTVTMFQERLAALEGAEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDA 138 (390)
T ss_pred CChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHH
Confidence 366789999999999999999999999999999999999999999999988877554 3456788999999889999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.++ +++++|++|+++||+|.+.|+++|.++|++||+++|+|++++.+.... . + ..+
T Consensus 139 l~~~i~-----------~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~---p------l-~~g 197 (390)
T PRK08133 139 WRAAVR-----------PNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQ---P------L-KLG 197 (390)
T ss_pred HHHhcC-----------cCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCC---c------h-hhC
Confidence 988874 356799999999999999999999999999999999999986554321 1 1 123
Q ss_pred ccEEEecCcccccCc----ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGSV----GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS 354 (457)
Q Consensus 279 ~Di~~~s~sK~lg~~----gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~ 354 (457)
+|+++.|++|.+++. ||+++++++.++.+.... ...+..++|..++.++..++.+. .++++..++...+.+
T Consensus 198 ~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~--~~~g~~~~~~~a~~~l~gl~tl~---~R~~~~~~~a~~la~ 272 (390)
T PRK08133 198 ADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFL--RTAGPTLSPFNAWVFLKGLETLS---LRMEAHSANALALAE 272 (390)
T ss_pred CcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHH--HHhCCCCCHHHHHHHHcccchHH---HHHHHHHHHHHHHHH
Confidence 489999999999753 588888887766554322 12334567877777666655443 366777788999999
Q ss_pred Hhhcc
Q psy15447 355 LLSQH 359 (457)
Q Consensus 355 ~L~~~ 359 (457)
.|++.
T Consensus 273 ~L~~~ 277 (390)
T PRK08133 273 WLEAH 277 (390)
T ss_pred HHHhC
Confidence 99884
No 254
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.92 E-value=2.1e-22 Score=201.58 Aligned_cols=313 Identities=14% Similarity=0.120 Sum_probs=208.9
Q ss_pred ccChHHHHHHHHHHHhhcCC------CcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHH-hcCCeEEEecC
Q psy15447 121 YGTNVVHLDLENDIASFMGL------EETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLI-ASRCKVQYFKH 193 (457)
Q Consensus 121 ~g~~~~~~~l~~~la~~~g~------~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~-~~g~~~~~~~~ 193 (457)
.|...+..++++.+.+++|. +++++++++++|+..++.+++++||.|+++.++|+.....+. ..|.+++.++.
T Consensus 95 ~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~ 174 (447)
T PLN02607 95 HGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHC 174 (447)
T ss_pred cchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeC
Confidence 35555555556555554441 244555566788998888999999999999999988777666 36777777653
Q ss_pred -------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccC
Q psy15447 194 -------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGS 263 (457)
Q Consensus 194 -------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~ 263 (457)
.|++++++++++.... +.+++++++.+++||+|.+.+ +++|.++|++||+.+|+||+|+...++.
T Consensus 175 ~~~~~f~~~~~~le~a~~~a~~~-----~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~ 249 (447)
T PLN02607 175 DSSNNFQVTPQALEAAYQEAEAA-----NIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSA 249 (447)
T ss_pred CCCCCCcCCHHHHHHHHHHHHHh-----CCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCC
Confidence 2678888888754321 245677888889999999998 7799999999999999999998665543
Q ss_pred CC-Cccccc---cCC-C-CCCccEEEecCcccccCcc---cEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHH
Q psy15447 264 TG-HGVTEY---FGV-S-TEEVDMIIGSLEHALGSVG---GFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALH 333 (457)
Q Consensus 264 ~g-~~~~~~---~~~-~-~~~~Di~~~s~sK~lg~~g---G~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~ 333 (457)
.. ..+.+. .+. + ++.+ +++.||||.||.+| |++++ ++.+++.++... .++ ..+.+...++.+.|+
T Consensus 250 ~~f~S~~s~~~~~~~~~~~~~v-~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~---~~~-~~s~~~q~~~~~~L~ 324 (447)
T PLN02607 250 SEFVSVAEIVEARGYKGVAERV-HIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS---SFT-LVSSQTQHLLASMLS 324 (447)
T ss_pred CCcccHHHHHhhcCCCCCcCcE-EEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHh---hcC-CCCHHHHHHHHHHhC
Confidence 11 111111 111 1 2333 77899999998666 99887 667766665332 122 123333333333332
Q ss_pred H---Hhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH-cCeeEe
Q psy15447 334 L---LKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ-AGFAIT 408 (457)
Q Consensus 334 ~---~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~ 408 (457)
. .++ ..+.+++++++.+.+.+.|++ .|+++..+..+.++|+.+....... ......++.+++++ +||.+.
T Consensus 325 d~~~~~~~l~~~r~~l~~~~~~~~~~L~~----~gi~~~~~~ag~fvw~~L~~~~~~~-~~~~e~~l~~~ll~~~gV~v~ 399 (447)
T PLN02607 325 DEEFTENYIRTNRERLRKRYEMIVQGLRR----AGIECLKGNAGLFCWMNLSPLLETP-TREGELALWDSILREVKLNIS 399 (447)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHh----CCCCcccCCeeEEEEEEchHhhcCC-CchhHHHHHHHHHHhCCEEEc
Confidence 1 111 124567788888889999988 5776655556788888875321000 00123467777775 699999
Q ss_pred ccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 409 CPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 409 ~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
++..+. ...++++|++++. .++++++++++.|.++++.-+
T Consensus 400 pG~~f~---~~~~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~~~~ 439 (447)
T PLN02607 400 PGSSCH---CSEPGWFRVCFAN-MSEDTLEVALKRIHRFMDRRK 439 (447)
T ss_pred CccccC---CCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHHH
Confidence 876432 1346899999975 578999999999999887654
No 255
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.92 E-value=1.2e-22 Score=200.00 Aligned_cols=245 Identities=16% Similarity=0.172 Sum_probs=185.0
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHHH
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQHL 199 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~l 199 (457)
.+...+|++++++++|.+.+++++||++|+..++.+++++||.|++....|+.... .+...|.++..++.+|++++
T Consensus 53 ~p~~~~le~~la~l~g~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~~l 132 (380)
T TIGR01325 53 NPTVAAFEERIAALEGAERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLNAW 132 (380)
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHHHH
Confidence 56689999999999999999999999999999999999999999998888866433 34556888888888889988
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV 279 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~ 279 (457)
++.++ +++++|++|+++||+|.+.|+++|.++|+++|+++|+|++++.+.... .+ ..++
T Consensus 133 ~~~i~-----------~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~---------pl-~~g~ 191 (380)
T TIGR01325 133 EAAVK-----------PNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQ---------PL-KLGA 191 (380)
T ss_pred HHhcC-----------CCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCC---------ch-hhCC
Confidence 87764 246799999999999999999999999999999999999987543211 11 1245
Q ss_pred cEEEecCcccccCc----ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Q psy15447 280 DMIIGSLEHALGSV----GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSL 355 (457)
Q Consensus 280 Di~~~s~sK~lg~~----gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~ 355 (457)
|+++.|++|.+++. ||++++++++++.++.... .++..++|..++.++..++.+.. ++++..+++.++.+.
T Consensus 192 Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~--~~g~~~~p~~a~~~l~~l~tl~~---r~~~~~~~a~~la~~ 266 (380)
T TIGR01325 192 DVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLR--HTGPAMSPFNAWVLLKGLETLSL---RMQKQFDSALAIAEW 266 (380)
T ss_pred CEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHH--hhCCCCCHHHHHHHHhccCcHHH---HHHHHHHHHHHHHHH
Confidence 89999999999753 5889999888877764322 24555688887777777666643 678888899999999
Q ss_pred hhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHH
Q psy15447 356 LSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCI 401 (457)
Q Consensus 356 L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~ 401 (457)
|++++.+..+..++ ...+.++.+.+++.. .+.++.+.|.
T Consensus 267 L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~~~-------~~~~f~~~l~ 319 (380)
T TIGR01325 267 LQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVADRA-------AAWKVLDAVE 319 (380)
T ss_pred HHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHH-------HHHHHHHcCC
Confidence 98843222222211 012568888887322 4556666654
No 256
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=4.8e-22 Score=193.09 Aligned_cols=309 Identities=13% Similarity=0.141 Sum_probs=208.4
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSAS 155 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ 155 (457)
.|..++||..|.. .+...|.+.+++.+.+.+.... .++ ..-..+|++.++++++.+ .+++++++++++..
T Consensus 16 ~~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~Y~-----~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~ 87 (337)
T PRK03967 16 EGNYRIWLDKNEN-PFDLPEELKEEIFEELKRVPFN--RYP-----HITSDPLREAIAEFYGLDAENIAVGNGSDELISY 87 (337)
T ss_pred CCCceEEecCCCC-CCCCCHHHHHHHHHHhhcCccc--cCC-----CCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHH
Confidence 3456789988753 3345688999988887642221 111 112467888899988844 34445555577776
Q ss_pred HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447 156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS 230 (457)
Q Consensus 156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~ 230 (457)
++.++ +||.|++..+.|..+....+..|.++..++.. |++.+++.+ .+++++++.+++||+
T Consensus 88 ~~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~------------~~~~~v~~~~P~NPt 153 (337)
T PRK03967 88 LVKLF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKA------------KNASAVFICSPNNPT 153 (337)
T ss_pred HHHHh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhc------------cCCCEEEEeCCCCCC
Confidence 66655 69999999999987777778888888777542 456665543 123466677889999
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHH
Q psy15447 231 ADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHH 307 (457)
Q Consensus 231 G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~ 307 (457)
|.+.+.++|.++++ +++++|+||+|.... +. ......... ++ .|+++||||.+|.+| ||+++++++++.+
T Consensus 154 G~~~~~~~l~~i~~-~~~~ii~De~y~~~~-~~---~~~~~~~~~-~~-vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~ 226 (337)
T PRK03967 154 GNLQPEEEILKVLE-TGKPVVLDEAYAEFS-GK---SLIGLIDEY-PN-LILLRTFSKAFGLAGIRAGYAIANEEIIDAL 226 (337)
T ss_pred CCCCCHHHHHHHHh-cCCEEEEECchhhhc-cc---chHHHHhhC-CC-EEEEecchHhhcchhhhheeeecCHHHHHHH
Confidence 99999999999995 799999999987422 21 111111111 23 488999999998665 9999999999888
Q ss_pred HhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchH
Q psy15447 308 RLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEV 387 (457)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 387 (457)
+..... + +.+.+..+++.+.++..+...+.++.+.++.+.+.+.|.+ .. .+++++++++.+
T Consensus 227 ~~~~~~--~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~~----~~~~~~~~~~~~------- 287 (337)
T PRK03967 227 YRIKPP--F--SLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGE----YA----YPSDANFLLLKL------- 287 (337)
T ss_pred HhhcCC--C--CCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcc----Cc----CCCCCcEEEEhH-------
Confidence 764432 2 3356666666656542222223344555666777777766 21 245677776632
Q ss_pred HHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 388 ASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 388 ~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
.+.+.|.++||.+++.. ....+++|+++. +.++.++++++|+++.+.
T Consensus 288 -------~~~~~l~~~gi~v~~~~------~~~~~~~Ri~~~---~~~~~~~l~~~l~~~~~~ 334 (337)
T PRK03967 288 -------DAYDYLLENGIVVRKLS------GRLEGHIRVTVG---KREENDEFIKALKEIKEG 334 (337)
T ss_pred -------HHHHHHHHCCEEEEeCC------CCCCCeEEEecC---CHHHHHHHHHHHHHHHHh
Confidence 26688889999998643 123579999986 688999999999887653
No 257
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=7.6e-23 Score=201.07 Aligned_cols=212 Identities=17% Similarity=0.187 Sum_probs=167.4
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH---HhcCCeEEEecCCCHHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL---IASRCKVQYFKHNNMQHL 199 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~---~~~g~~~~~~~~~d~~~l 199 (457)
.++...+||+++|+++|.+.+++++||++|+..++.+++++||.|+++.+.|+++...+ ...|.++..+. .|++++
T Consensus 51 ~np~~~~lE~~lA~l~g~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~-~d~~~l 129 (385)
T PRK08574 51 ENPTLRPLEEALAKLEGGVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY-PSTEDI 129 (385)
T ss_pred CCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC-CCHHHH
Confidence 45678899999999999999999999999999999999999999999999998876655 34466666654 468888
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV 279 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~ 279 (457)
++.+++ .++++|++|+++||+|.+.|+++|.++|++||+++|+|++++.+.... + +. .++
T Consensus 130 ~~~i~~----------~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~---~------l~-~Ga 189 (385)
T PRK08574 130 IEAIKE----------GRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYR---P------LR-HGA 189 (385)
T ss_pred HHhcCc----------cCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCC---h------hh-hCC
Confidence 887743 256788899999999999999999999999999999999997664321 1 11 345
Q ss_pred cEEEecCcccccC----ccc-EEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447 280 DMIIGSLEHALGS----VGG-FCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS 354 (457)
Q Consensus 280 Di~~~s~sK~lg~----~gG-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~ 354 (457)
|+++.|++|++++ .|| ++++++++.+.++... ..++..++|+.++.++..++.+. .++++..+++.++.+
T Consensus 190 Divv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~--~~~g~~~~p~~a~l~l~~l~tL~---~R~~~~~~na~~la~ 264 (385)
T PRK08574 190 DFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWR--RRLGTIMQPFEAYLVLRGLKTLE---VRFERQCRNAMAIAE 264 (385)
T ss_pred cEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHH--HhcCCCCCHHHHHHHHcccCcHH---HHHHHHHHHHHHHHH
Confidence 8999999999964 267 4555777777765432 22566678988888887776654 367778889999999
Q ss_pred Hhhccc
Q psy15447 355 LLSQHK 360 (457)
Q Consensus 355 ~L~~~~ 360 (457)
.|++++
T Consensus 265 ~L~~~p 270 (385)
T PRK08574 265 FLSEHP 270 (385)
T ss_pred HHHcCC
Confidence 998754
No 258
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.92 E-value=6.9e-23 Score=189.30 Aligned_cols=326 Identities=16% Similarity=0.156 Sum_probs=222.4
Q ss_pred EEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcC
Q psy15447 83 INFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVK 162 (457)
Q Consensus 83 id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~ 162 (457)
+||.|.++-+ .+|++.+++.++-. +....||..+...++++++++++|.+.++|+.||+.||..+|.+.++
T Consensus 2 ~~f~SDn~~g--~~~~m~eam~~a~~-------~~~~~YG~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~~ 72 (342)
T COG2008 2 IDFRSDNVAG--PTPEMREALAAANA-------VGDDVYGEDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHCQ 72 (342)
T ss_pred CccccCccCC--CCHHHHHHHHhccc-------cCCCCCCCCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhcC
Confidence 5788876655 47999999876642 12335789999999999999999998899999999999999999999
Q ss_pred CCCEEEEeCcccHHHHHH--HHhc--CCeEEEecC----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC
Q psy15447 163 RNDAVFVDENINFAIQTG--LIAS--RCKVQYFKH----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC 234 (457)
Q Consensus 163 ~gd~v~~~~~~h~~~~~~--~~~~--g~~~~~~~~----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~ 234 (457)
|++.|++....|...... +... +.++...+. .++++++..++..+ . +. ..+..++.++..+..|.+.
T Consensus 73 ~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d--~-~~--~~~~~~~~e~~~te~GtVy 147 (342)
T COG2008 73 PGESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDD--I-HH--APTPLAVLENTATEGGTVY 147 (342)
T ss_pred CCCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCC--c-cc--CCCceEEEeeccCCCceec
Confidence 999999999998766532 2222 244444442 27999999887621 1 11 2344555555555889999
Q ss_pred C---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhh
Q psy15447 235 P---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLS 310 (457)
Q Consensus 235 ~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~ 310 (457)
| |++|.++||+||+.|++|.+.-+-..-..|... ..+ ...+|++..+++|.+|.++ +.++++.+++..++..
T Consensus 148 ~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~-~~~---~~~~D~v~~~~tK~g~~~~gAiv~gn~~~~~~a~~~ 223 (342)
T COG2008 148 PLDELEAISAVCKEHGLPLHMDGARLANALVALGVAL-KTI---KSYVDSVSFCLTKGGGAPVGAIVFGNRDFAKRARRW 223 (342)
T ss_pred CHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCH-HHH---HhhCCEEEEecccCCcceeeeEEEcCHHHHHHHHHH
Confidence 9 568888899999999999985322221111111 111 1456899999999998665 5678899888877543
Q ss_pred CCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHH--HHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHH
Q psy15447 311 GSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREK--CNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVA 388 (457)
Q Consensus 311 ~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~--~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 388 (457)
.+.+....+-.-+.++.++..| +++-.+.....+| +.+|.+.|.+ .+|+++..++.++++.+.++...
T Consensus 224 rK~~Ggl~~k~r~laA~~~~~l---~~~~~~~~~~Han~mA~~La~~~~~---~~G~~~~~~~~tN~vf~~l~~~~---- 293 (342)
T COG2008 224 RKRAGGLMRKARFLAAQGLYAL---EDDVWRLAADHANAMAARLAEGLEA---KPGVKLAFPVETNMVFVRLPESA---- 293 (342)
T ss_pred HHHhcccHhhhhHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHhhhh---cCCceeccCCcccEEEEECChHH----
Confidence 3322222222344445454443 3332333333344 8899999986 48999987788999999887642
Q ss_pred HHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 389 SKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 389 ~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
........++...|+++... ...+||+.+..+|++|++++++.++++.
T Consensus 294 --i~~l~~~~~~~~~~~~~~~~----------~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 294 --IEALRLAGALFYRGVLIGAH----------GEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred --HHHHHhhchhheeeeeccCC----------CceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 01222333344445554322 1479999999999999999999998764
No 259
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.92 E-value=1.6e-22 Score=200.18 Aligned_cols=212 Identities=18% Similarity=0.240 Sum_probs=169.7
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHHH
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQHL 199 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~l 199 (457)
.+...+|++.++++.|.+.+++++||+.|+..++.+++++||.|++..+.|+.+.. .+...|.++..++..|++++
T Consensus 64 ~p~~~~le~~lA~l~g~~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l 143 (403)
T PRK07503 64 NPTLALLEQRMASLEGGEAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPAAL 143 (403)
T ss_pred CchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHHHH
Confidence 46688999999999999999999999999999999999999999999988866443 34567888988888899999
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV 279 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~ 279 (457)
++.+++ ++++|++|+++||+|.+.|+++|.++|++||+++|+|++|+.+..+. . .+ ..+
T Consensus 144 ~~~i~~-----------~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~~---~----l~---~g~ 202 (403)
T PRK07503 144 KAAISD-----------KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQR---P----LE---LGA 202 (403)
T ss_pred HHhcCc-----------cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCC---c----hh---hCC
Confidence 888753 45788899999999999999999999999999999999997653321 1 11 244
Q ss_pred cEEEecCcccccCc----ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Q psy15447 280 DMIIGSLEHALGSV----GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSL 355 (457)
Q Consensus 280 Di~~~s~sK~lg~~----gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~ 355 (457)
|+++.|++|.+|+. ||++++++++++.++........+..++|+.++.++..|+.+. .++++..+++..+.+.
T Consensus 203 Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~tl~---~r~~~~~~na~~~a~~ 279 (403)
T PRK07503 203 DLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKTLA---LRMDRHCASAQAVAEW 279 (403)
T ss_pred CEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcchHH---HHHHHHHHHHHHHHHH
Confidence 89999999999753 6888888888887764322223455679998888877776554 3566777888888888
Q ss_pred hhcc
Q psy15447 356 LSQH 359 (457)
Q Consensus 356 L~~~ 359 (457)
|+++
T Consensus 280 L~~~ 283 (403)
T PRK07503 280 LARH 283 (403)
T ss_pred HHhC
Confidence 8874
No 260
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.92 E-value=2.3e-22 Score=198.70 Aligned_cols=211 Identities=16% Similarity=0.171 Sum_probs=167.7
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHHH
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQHL 199 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~l 199 (457)
.+...+|++++|++.|.+.++++++|+.|+..++.+++++||.|++..+.|+++...+ ...|.++..++..|++++
T Consensus 64 ~p~~~~Le~~lA~l~G~~~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l 143 (398)
T PRK07504 64 NPTVDMFEKRMCALEGAEDARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDNW 143 (398)
T ss_pred CchHHHHHHHHHHHhCCCeeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHHH
Confidence 5667899999999999999999999999999888888999999999998887654432 345888888888899999
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV 279 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~ 279 (457)
++.++ +++++|++|+++||+|.+.|+++|.++|+++|+++|+|++|+.+.... . . . .++
T Consensus 144 ~~ai~-----------~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~~---~-~-~-----~ga 202 (398)
T PRK07504 144 EKAVR-----------PNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQK---P-L-E-----LGA 202 (398)
T ss_pred HHhcC-----------cCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccCC---c-h-h-----hCC
Confidence 88874 356899999999999999999999999999999999999998654321 1 1 1 245
Q ss_pred cEEEecCcccccCc----ccEEEecHHHHHH-HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447 280 DMIIGSLEHALGSV----GGFCVGSSYIIEH-HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS 354 (457)
Q Consensus 280 Di~~~s~sK~lg~~----gG~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~ 354 (457)
|+++.|++|++++. ||+++++++.+.. ++... ...+..++|+.++.++..|+.+.. ++++..+++..+.+
T Consensus 203 Divv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~--~~~g~~~s~~~A~~~l~~L~tl~~---R~~~~~~na~~la~ 277 (398)
T PRK07504 203 HIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYF--RHTGPSLSPFNAWTLLKGLETLPV---RVRQQTESAAAIAD 277 (398)
T ss_pred CEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHH--HHhCCCCCHHHHHHHHhccchHHH---HHHHHHHHHHHHHH
Confidence 89999999999653 5788888776543 32211 123446799999999888877643 67788899999999
Q ss_pred Hhhccc
Q psy15447 355 LLSQHK 360 (457)
Q Consensus 355 ~L~~~~ 360 (457)
.|++++
T Consensus 278 ~L~~~p 283 (398)
T PRK07504 278 FLAGHP 283 (398)
T ss_pred HHHcCC
Confidence 998843
No 261
>PRK06460 hypothetical protein; Provisional
Probab=99.91 E-value=4.9e-22 Score=195.01 Aligned_cols=292 Identities=15% Similarity=0.176 Sum_probs=200.9
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCccc----HHHHHHHHhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENIN----FAIQTGLIASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h----~~~~~~~~~~g~~~~~~~~~d~~~ 198 (457)
..+...+|++++|++.|.+.++++++|++|+..++.+++++||.|++..+.+ ..+...++..|.++..++.++.+.
T Consensus 43 ~~p~~~~L~~~lA~l~g~~~~v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~~~ 122 (376)
T PRK06460 43 ANPTVLELTKKIVELENAEMGVAFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSDNI 122 (376)
T ss_pred CCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCHHH
Confidence 4567899999999999998899999999999999999999999999886543 333455677788888888776555
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.++ +++++|++++++||+|.+.|+++|.++|++||+++|+||+|+.+... . .+. .+
T Consensus 123 l~~~~~-----------~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~---~------~l~-~~ 181 (376)
T PRK06460 123 IEKAKS-----------KRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQ---K------PLE-LG 181 (376)
T ss_pred HHHhcC-----------CCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccC---C------hhh-cC
Confidence 544331 35679999999999999999999999999999999999998643211 1 111 23
Q ss_pred ccEEEecCcccccC----cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS 354 (457)
Q Consensus 279 ~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~ 354 (457)
.|+++.|++|++++ .+|++++++++++.++.... .++.+.+|..+..++..++.++ .+++++.++++++.+
T Consensus 182 ~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~--~~g~~~~~~~a~~~l~~~~~l~---~r~~~~~~n~~~l~~ 256 (376)
T PRK06460 182 ADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRR--TLGTSLDPHAAYLTLRGIKTLK---IRMDVINRNAEQIAE 256 (376)
T ss_pred CCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHH--hcCCCCCHHHHHHHHhchhhHH---HHHHHHHHHHHHHHH
Confidence 58999999999964 36899999998888865432 2444567776666666666554 477889999999999
Q ss_pred HhhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH--cCeeE----eccccCc
Q psy15447 355 LLSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ--AGFAI----TCPSHLD 414 (457)
Q Consensus 355 ~L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~--~Gi~v----~~~~~~~ 414 (457)
.|++++.+..+..++ ...+.++.+.++++. ..+.++.+.|.= .+.-+ +...+|.
T Consensus 257 ~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~------~~~~~~~~~l~~~~~~~s~Gg~~sl~~~p~ 330 (376)
T PRK06460 257 FLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQ------ESALKVMKSLKLIIPAQTLGGVNSVISHPA 330 (376)
T ss_pred HHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcH------HHHHHHHHhCCcceeccCCCCCceEEeCcc
Confidence 999854332222211 122567888886432 144556665531 11000 0001111
Q ss_pred c------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 415 Q------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 415 ~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
. .....++.+|+++.+. |.+.+++-|+++++.
T Consensus 331 ~~~~~~~~~~~~~~~gi~~~liR~svGlE----~~~dl~~dl~~al~~ 374 (376)
T PRK06460 331 TMSHRTLSLEERKIVGITDSLLRLSVGIE----DVNDLIEDLDRALST 374 (376)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHHh
Confidence 1 0112357899999864 455555555555543
No 262
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.91 E-value=5.2e-22 Score=196.18 Aligned_cols=233 Identities=15% Similarity=0.114 Sum_probs=180.0
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHH----HHHHhcCCeEEEecCCCHHHH
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQ----TGLIASRCKVQYFKHNNMQHL 199 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~----~~~~~~g~~~~~~~~~d~~~l 199 (457)
++...+||++||++.|.+.+++++||+.|+..++.++.++||.|++....|+.++ ..++..|.++..++.+|++++
T Consensus 69 ~p~~~~le~~lA~l~g~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~l 148 (403)
T PRK07810 69 NPTVSMFEERLRLIEGAEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQW 148 (403)
T ss_pred CchHHHHHHHHHHHhCCCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHHH
Confidence 4567899999999999999999999999999999999999999999886665443 345667899999999999999
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV 279 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~ 279 (457)
++++++ ++++|++|++.||+|.+.++++|.++|+++|+++|+|++|+.+.... + + ..++
T Consensus 149 ~~ai~~-----------~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~---~------~-~~ga 207 (403)
T PRK07810 149 EEALSV-----------PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQR---G------L-PLGA 207 (403)
T ss_pred HHhcCc-----------CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCC---h------h-hcCC
Confidence 998853 46799999999999999999999999999999999999998664421 1 1 1245
Q ss_pred cEEEecCcccccCc----ccEEEecHHHHHH-HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447 280 DMIIGSLEHALGSV----GGFCVGSSYIIEH-HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS 354 (457)
Q Consensus 280 Di~~~s~sK~lg~~----gG~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~ 354 (457)
|+++.|++|.+++. ||+++++++.+.. ++... ...+..++|..++.++..|+.+. .++++..+++.++.+
T Consensus 208 Divv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~--~~~g~~~s~~~a~l~l~~L~tl~---~R~~~~~~~a~~~a~ 282 (403)
T PRK07810 208 DVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLM--RHTGPALSAFNAWVLLKGLETLA---LRVRHSNASALRIAE 282 (403)
T ss_pred cEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHH--HHhCCCCCHHHHHHHHhccCcHH---HHHHHHHHHHHHHHH
Confidence 89999999999642 6889888775542 33211 12344679999898888877664 477888899999999
Q ss_pred HhhcccccCCeEEecc--------------CCCCeEEEEecC
Q psy15447 355 LLSQHKVTQRFLVQGH--------------RDTPLKYLYLQK 382 (457)
Q Consensus 355 ~L~~~~~~~~~~~~~~--------------~~~~~~~i~~~~ 382 (457)
.|++++.+..+..++- ..+.++.+.++.
T Consensus 283 ~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~ 324 (403)
T PRK07810 283 FLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDA 324 (403)
T ss_pred HHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence 9988443332322110 235678888864
No 263
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.91 E-value=3.9e-22 Score=195.41 Aligned_cols=230 Identities=17% Similarity=0.179 Sum_probs=175.0
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~ 198 (457)
.++...+|++++|++.|.+.+++++||++|+..++ .+.++||.|++..+.|+.+.. .+...|.++..++..|+++
T Consensus 50 ~~pt~~~le~~la~l~g~~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~ 128 (366)
T PRK08247 50 GNPTRGVLEQAIADLEGGDQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLKA 128 (366)
T ss_pred CCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHHH
Confidence 45678999999999999999999999999998766 577899999999888776433 3455788999999889999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.+++ ++++|++|+++||+|.+.++++|.++|++||+++|+||+|+.+.... .+ ..+
T Consensus 129 l~~~i~~-----------~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~---------p~-~~g 187 (366)
T PRK08247 129 IEQAITP-----------NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQR---------PL-EEG 187 (366)
T ss_pred HHHhccc-----------CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC---------ch-hcC
Confidence 9888753 45799999999999999999999999999999999999986543321 11 134
Q ss_pred ccEEEecCcccccC----cccEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGS----VGGFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 279 ~Di~~~s~sK~lg~----~gG~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~ 353 (457)
.||+++|++|.+++ .+|+++++ +++.+.++... ...+..++|+.++.++..++.+. .++++.+++++.+.
T Consensus 188 ~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~--~~~g~~~s~~~a~l~~~~l~tl~---~r~~~~~~~a~~l~ 262 (366)
T PRK08247 188 ADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQ--NAAGAVLSPFDSWLLIRGMKTLA---LRMRQHEENAKAIA 262 (366)
T ss_pred CcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHH--HhcCCCCChHHHHHHHhccCcHH---HHHHHHHHHHHHHH
Confidence 58999999999975 46888886 66666654322 12233457777777767665443 35677789999999
Q ss_pred HHhhcccccCCeEEe-ccCCCCeEEEEecC
Q psy15447 354 SLLSQHKVTQRFLVQ-GHRDTPLKYLYLQK 382 (457)
Q Consensus 354 ~~L~~~~~~~~~~~~-~~~~~~~~~i~~~~ 382 (457)
+.|++ .+++..+ .++.+.++.+.++.
T Consensus 263 ~~L~~---~p~v~~v~~P~~gg~~sf~~~~ 289 (366)
T PRK08247 263 AFLNE---QPGVTDVLYPGRGGMLSFRLQD 289 (366)
T ss_pred HHHHh---CCCeeEEecCCcCcEEEEEECC
Confidence 99998 4666532 34357777777753
No 264
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.91 E-value=1.5e-21 Score=195.52 Aligned_cols=345 Identities=12% Similarity=0.095 Sum_probs=207.0
Q ss_pred eeEEeecCCccCCCC-ChhhHHHHHHHHHhcCC--CCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccHHHH
Q psy15447 81 PCINFATHNYLSFVE-NPDIEKCAIDCIDKNGV--GSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGFSTS 153 (457)
Q Consensus 81 ~~id~~s~~~l~~~~-~p~i~~a~~~~l~~~~~--~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~ 153 (457)
..+||..+++..... .+.+.+++.+.+.+... ....+....|..++.+.+++.+.+..|. +.+++++++.+++
T Consensus 31 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al 110 (416)
T PRK09440 31 GAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSAF 110 (416)
T ss_pred CceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHH
Confidence 468888765432111 13456666655543111 0011222334445555555555544442 3445555556888
Q ss_pred HHHHHhhcC-----CCCEEEE-eCcccHHHHHHHHhcC------CeEEEecC------CCHHHHHHHHHhhchhcccCCC
Q psy15447 154 ASAIAAYVK-----RNDAVFV-DENINFAIQTGLIASR------CKVQYFKH------NNMQHLEELLRQQDERDTLNSK 215 (457)
Q Consensus 154 ~~ai~a~~~-----~gd~v~~-~~~~h~~~~~~~~~~g------~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~ 215 (457)
..++.++++ +||.|++ ..++|..+.......+ ..+...+. .|+++++ + .
T Consensus 111 ~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~---~-------- 177 (416)
T PRK09440 111 FYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--I---D-------- 177 (416)
T ss_pred HHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--c---C--------
Confidence 888888885 5889998 6888877655333222 12222211 2555654 1 1
Q ss_pred CccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC
Q psy15447 216 VTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS 292 (457)
Q Consensus 216 ~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~ 292 (457)
.+++++++.+++||||.+.+ +++|.++|++||+++|+||+|+............. .. .++ .|+++||||. +.
T Consensus 178 ~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~--~~-~~~-vI~~~SfSK~-~~ 252 (416)
T PRK09440 178 EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATP--LW-NPN-IILCMSLSKL-GL 252 (416)
T ss_pred CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCc--cc-cCC-eEEEeccccc-CC
Confidence 34578888888999999998 67888899999999999999863211100000000 01 123 4889999996 55
Q ss_pred cc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH---HhhCc-HHHHHHHHHHHHHHHHhhcccccCCe
Q psy15447 293 VG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHL---LKANP-SLLTKLREKCNTMHSLLSQHKVTQRF 365 (457)
Q Consensus 293 ~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~---~~~~~-~~~~~l~~~~~~l~~~L~~~~~~~~~ 365 (457)
+| ||+++++++++.+......+.. +.+.+...++.+.++. .+... .++..++++.+.+++.|.+.....++
T Consensus 253 pGlRiG~~i~~~~l~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~ 330 (416)
T PRK09440 253 PGVRCGIVIADEEIIEALSNMNGIISL--APGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPC 330 (416)
T ss_pred CcceEEEEeCCHHHHHHHHHHHHHhcc--CCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCe
Confidence 54 9999999999888654433222 2355555555555431 11111 13445566666777776552101245
Q ss_pred EEeccCCCCeEEEEecC-CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccC----CCCCeEEEEecCCCCHHHHHHH
Q psy15447 366 LVQGHRDTPLKYLYLQK-SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAK----KQKPSIRITCNISHTEQDMNSL 440 (457)
Q Consensus 366 ~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~----~~~~~lRi~~~~~~t~edi~~~ 440 (457)
.+..+.++.++|+.++. .. ...++.+.|.++||.+.++..+..... ...+++||+++. ++++++++
T Consensus 331 ~~~~p~gg~fiw~~~~~~~~-------~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~--~~~~l~~~ 401 (416)
T PRK09440 331 LIHKPEGAIFLWLWFKDLPI-------TTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ--DDEEIEKG 401 (416)
T ss_pred EEecCCCceEEEEECCCCCC-------CHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEecC--CHHHHHHH
Confidence 55445568888988865 22 345788888899999998764321000 013589999973 79999999
Q ss_pred HHHHHHHHHHhcCC
Q psy15447 441 IETLCKSHDIAVQP 454 (457)
Q Consensus 441 ~~~l~~~~~~~~~~ 454 (457)
+++|+++++...++
T Consensus 402 i~~l~~~~~~~~~~ 415 (416)
T PRK09440 402 IAILAEEVEKAYAE 415 (416)
T ss_pred HHHHHHHHHHHhhc
Confidence 99999998876653
No 265
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=7.4e-22 Score=194.58 Aligned_cols=211 Identities=17% Similarity=0.185 Sum_probs=164.3
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHh----cCCeEEEecCCCHHHH
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIA----SRCKVQYFKHNNMQHL 199 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~----~g~~~~~~~~~d~~~l 199 (457)
.+...+|++++|++.|.+.++.++||++|+..++.+++++||.|++..+.|+++...+.. .|.++..++..|++++
T Consensus 60 ~p~~~~Le~~lA~~~g~~~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e~l 139 (388)
T PRK07811 60 NPTRTALEEQLAALEGGAYGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLDAV 139 (388)
T ss_pred CccHHHHHHHHHHHhCCCceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHHHH
Confidence 456789999999999999999999999999999999999999999999998876544332 4677788888889999
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV 279 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~ 279 (457)
++.+.+ ++++|++|+++||+|.+.++++|.++|++||+++|+|++++.+..+. . .+ ..+
T Consensus 140 ~~~i~~-----------~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~---p----~~---~ga 198 (388)
T PRK07811 140 RAAITP-----------RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQ---P----LA---LGA 198 (388)
T ss_pred HHhcCc-----------CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCC---c----hh---hCC
Confidence 888743 46799999999999999999999999999999999999987654321 1 11 245
Q ss_pred cEEEecCcccccCc----ccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447 280 DMIIGSLEHALGSV----GGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS 354 (457)
Q Consensus 280 Di~~~s~sK~lg~~----gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~ 354 (457)
|+++.|++|++++. ||++++ ++++.+.++... ...+...+|..++.++..|+.+ +.++++..+++..+.+
T Consensus 199 Divv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~--~~~g~~~s~~~a~l~~~~L~tl---~~R~~~~~~na~~la~ 273 (388)
T PRK07811 199 DVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQ--NGAGAVPGPFDAYLTLRGLKTL---AVRMDRHSENAEAVAE 273 (388)
T ss_pred cEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHH--HhcCCCCCHHHHHHHHhccCcH---HHHHHHHHHHHHHHHH
Confidence 89999999999753 587766 466666554321 1223345777766666665544 3467888889999999
Q ss_pred Hhhccc
Q psy15447 355 LLSQHK 360 (457)
Q Consensus 355 ~L~~~~ 360 (457)
.|++++
T Consensus 274 ~L~~~p 279 (388)
T PRK07811 274 FLAGHP 279 (388)
T ss_pred HHHhCC
Confidence 998843
No 266
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.91 E-value=8.5e-22 Score=192.04 Aligned_cols=234 Identities=19% Similarity=0.222 Sum_probs=182.8
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~ 198 (457)
.++....||++||++.|.+.+++++||+.|+.+++.++.++||.|++....|+.+...+ +..|.++.+++..|+++
T Consensus 60 ~nPt~~~le~~la~LEg~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~ 139 (395)
T PRK08114 60 GTLTHFSLQEAMCELEGGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGAD 139 (395)
T ss_pred CChhHHHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence 46778999999999999999999999999999999999999999999888887766544 44688999999899999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcC--cEEEEEcCcccccccCCCCccccccCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQ--ARIFVDESVSFGTLGSTGHGVTEYFGVST 276 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g--~~li~DEa~~~g~~g~~g~~~~~~~~~~~ 276 (457)
+++.++. ++++|++|++.|++|.+.|+++|.++|+++| +++++|.+++.+.. +....
T Consensus 140 l~~~l~~-----------~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~----------~~pl~ 198 (395)
T PRK08114 140 IAKLIQP-----------NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL----------FKALD 198 (395)
T ss_pred HHHhcCC-----------CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc----------cCHHH
Confidence 9988853 5689999999999999999999999999984 99999999876532 11222
Q ss_pred CCccEEEecCcccccC----cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHH
Q psy15447 277 EEVDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTM 352 (457)
Q Consensus 277 ~~~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l 352 (457)
.++|+++.|.+|.+++ .+|+++.+++..+.++.. ....+..++|..|...+..|+-+. -++++..+++..+
T Consensus 199 ~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~--~~~~G~~~~p~~a~l~~rgl~TL~---lR~~~~~~na~~v 273 (395)
T PRK08114 199 FGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLREN--SYLMGQMVDADTAYMTSRGLRTLG---VRLRQHEESSLKV 273 (395)
T ss_pred cCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHH--HHhccCCCCHHHHHHHHcCCCcHH---HHHHHHHHHHHHH
Confidence 4569999999999964 347778787765655422 123455689999888777765543 4778899999999
Q ss_pred HHHhhcccccCCeEEec--------------cCCCCeEEEEecC
Q psy15447 353 HSLLSQHKVTQRFLVQG--------------HRDTPLKYLYLQK 382 (457)
Q Consensus 353 ~~~L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~ 382 (457)
.+.|++++.+..+..++ ...+.++.+.++.
T Consensus 274 a~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~ 317 (395)
T PRK08114 274 AEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKK 317 (395)
T ss_pred HHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecC
Confidence 99999854333232221 1235688888864
No 267
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=1.3e-21 Score=191.60 Aligned_cols=247 Identities=14% Similarity=0.136 Sum_probs=183.5
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~ 198 (457)
.++....|+++||++.|.+.+++++||++|+..++.+++++||.|++..+.|+.....+ ...|.++..++..|+++
T Consensus 51 ~npt~~~Le~~lA~leg~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~ 130 (388)
T PRK08861 51 GNPNRGLLEQTLSELESGKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAA 130 (388)
T ss_pred CCchHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHH
Confidence 35667899999999999999999999999999999999999999999998888654432 23467788888788999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.+.+ ++++|++++++||+|.+.|+++|.++|+++|+++|+||+|..+.+.. .++ .+
T Consensus 131 l~~~i~~-----------~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~---------pl~-~G 189 (388)
T PRK08861 131 LDAALAK-----------KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQK---------PLE-LG 189 (388)
T ss_pred HHHhcCc-----------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCC---------Ccc-cC
Confidence 8887743 46799999999999999999999999999999999999997654321 111 24
Q ss_pred ccEEEecCcccccCc----ccEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGSV----GGFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 279 ~Di~~~s~sK~lg~~----gG~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~ 353 (457)
+|+++.|++|.+++. ||+++++ +++.+.++... ...+..++|..+...+..|+-+. .++++..+++..+.
T Consensus 190 aDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~--~~~G~~~~p~~a~l~~rgl~Tl~---lR~~~~~~~a~~~a 264 (388)
T PRK08861 190 ADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWG--NCIGATGTPFDSYMTLRGIRTLG---ARMRVHEESAQQIL 264 (388)
T ss_pred CCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHH--hccCCCCChHHHHHHHhcCCCHH---HHHHHHHHHHHHHH
Confidence 689999999999642 6887764 55655554322 23455678998887777765543 47788899999999
Q ss_pred HHhhcccccCCeEEecc--------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHH
Q psy15447 354 SLLSQHKVTQRFLVQGH--------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCI 401 (457)
Q Consensus 354 ~~L~~~~~~~~~~~~~~--------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~ 401 (457)
+.|++++.+..+..++- ..+.++.+.++.+. ..+.++++.|.
T Consensus 265 ~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~------~~~~~f~~~l~ 320 (388)
T PRK08861 265 AYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSF------EQLKVFVKALA 320 (388)
T ss_pred HHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCH------HHHHHHHhcCC
Confidence 99998543322222211 12567888886432 13445665554
No 268
>KOG1368|consensus
Probab=99.91 E-value=1.8e-22 Score=179.36 Aligned_cols=333 Identities=18% Similarity=0.236 Sum_probs=231.5
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY 160 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~ 160 (457)
+.+|+-|... -- +..+.++++.++.-- ...||..+...+||++.|+++|.|..+|++||+.+|..+|...
T Consensus 22 ~~vDLRSDTv-T~-PTdeMr~am~eA~vg--------DdVyGeD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~H 91 (384)
T KOG1368|consen 22 RSVDLRSDTV-TV-PTDEMRRAMAEASVG--------DDVYGEDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVH 91 (384)
T ss_pred eccccccccc-cC-ChHHHHHHHhhcccC--------cccccCCccHHHHHHHHHHHhCccceeeecccccccHHHHHHH
Confidence 4566666322 11 346677777666432 2246677788999999999999999999999999999999987
Q ss_pred cC-CCCEEEEeCcccHHHHHH---HHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447 161 VK-RNDAVFVDENINFAIQTG---LIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA 231 (457)
Q Consensus 161 ~~-~gd~v~~~~~~h~~~~~~---~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G 231 (457)
|. ||..|++.+.+|...+.. ..+.|+.+.++.. .+++++|+.+.... .+.+. +.+++|.+|.-++++|
T Consensus 92 c~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~-GD~H~--p~T~LIclENT~~~~G 168 (384)
T KOG1368|consen 92 CHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPK-GDCHM--PPTKLICLENTHNNCG 168 (384)
T ss_pred hcCCCceEEeccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCC-CCccC--CCceEEEeeccccccC
Confidence 75 899999999998766543 3445655555432 26899999887432 12333 3678999998887755
Q ss_pred -CCCCh---HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC-cccEEEecHHHHHH
Q psy15447 232 -DICPL---KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS-VGGFCVGSSYIIEH 306 (457)
Q Consensus 232 -~i~~l---~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~-~gG~v~~~~~~~~~ 306 (457)
.+.|+ .++.+||++||+.|++|.+.-|-.--..|-+.-. +. ..+|-+-.+|||++|. .|..++|++++++.
T Consensus 169 g~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~-i~---~~fDSVsiCLSKglgAPVGSViVG~k~FI~k 244 (384)
T KOG1368|consen 169 GKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKK-IC---SAFDSVSICLSKGLGAPVGSVIVGSKDFIDK 244 (384)
T ss_pred ceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHH-HH---HhhhhhhhhhhccCCCCcccEEEccHHHHHH
Confidence 78885 5888999999999999998544322222222111 11 2235555589999985 57889999999988
Q ss_pred HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-CCCCeEEEEecCCcc
Q psy15447 307 HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-RDTPLKYLYLQKSDD 385 (457)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~ 385 (457)
.+.....+..+.....+.||+++-+|+.- .+ ...+-.+++..+.+.+.. ..++++..+ .+++++.+.+..+.
T Consensus 245 A~~~RKalGGGmRQsGvLaaaaLval~~~--~~-~L~~dHk~A~~lAe~~~~---~~~i~v~v~a~etNiv~~~l~q~~- 317 (384)
T KOG1368|consen 245 ARHFRKALGGGMRQSGVLAAAALVALDEN--VP-LLRADHKRAKELAEYINT---PEEIRVEVPAVETNIVNMVLCQAR- 317 (384)
T ss_pred HHHHHHHhcCchhHHHHHHHHHHHHhhcc--hH-HHHHHHHHHHHHHHHhcc---ccceeeecchhhcceeeeeccccc-
Confidence 76554333223234777888888776432 22 445555666667777766 344766544 56788877765443
Q ss_pred hHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHH-HHHHHHh
Q psy15447 386 EVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL-CKSHDIA 451 (457)
Q Consensus 386 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l-~~~~~~~ 451 (457)
..+..+++.+.++||.+-... ..++|+.++..+|+++++.+++++ +.++...
T Consensus 318 -----~~~~~l~~~~~k~gi~lm~~~---------s~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~q~ 370 (384)
T KOG1368|consen 318 -----LTAEELCKFLEKNGILLMGGA---------SRRIRIVLHHQVTDEDVEYVKSVLSKKFLKQL 370 (384)
T ss_pred -----CCHHHHHHHHHHCCeEEeecc---------ccceEEEEEEecCHHHHHHHHHHHHHHHHhhc
Confidence 156789999999999887543 357999999999999999999999 4444443
No 269
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.91 E-value=1.9e-21 Score=196.77 Aligned_cols=339 Identities=12% Similarity=0.088 Sum_probs=215.3
Q ss_pred eecCCccCCCCChhhHHHHHHHHHhcCCCCCCC-CCcccChHHHHHHHHHHHhhcCCCcEEEe-cccHHHHHHH---HH-
Q psy15447 85 FATHNYLSFVENPDIEKCAIDCIDKNGVGSCGP-RGFYGTNVVHLDLENDIASFMGLEETALY-SFGFSTSASA---IA- 158 (457)
Q Consensus 85 ~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~-~~~~g~~~~~~~l~~~la~~~g~~~~i~~-~sG~~a~~~a---i~- 158 (457)
|.+.++..+.-.|.+.+++.+.....+.++..+ ....|..+...++++.+++++|.+.+.++ ++|+.+...+ +.
T Consensus 72 ~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~ 151 (481)
T PRK04366 72 FYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRA 151 (481)
T ss_pred eecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHH
Confidence 443333333345778887776522223333322 24567889999999999999998766544 5666554432 22
Q ss_pred hhcCCCC----EEEEeCcccHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447 159 AYVKRND----AVFVDENINFAIQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN 229 (457)
Q Consensus 159 a~~~~gd----~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~ 229 (457)
...++|| .|++..+.|+++...+...|.+++.++. .|++++++.+.+ ++++|++..++ +
T Consensus 152 ~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~~-----------~t~~V~v~~Pn-~ 219 (481)
T PRK04366 152 YHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVGE-----------DTAALMLTNPN-T 219 (481)
T ss_pred HhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhccc-----------CCeEEEEeCCC-C
Confidence 2345555 8999999999999999999998887764 367888877742 45666677766 8
Q ss_pred CCCC-CChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc-------ccEEEecH
Q psy15447 230 SADI-CPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV-------GGFCVGSS 301 (457)
Q Consensus 230 ~G~i-~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~-------gG~v~~~~ 301 (457)
+|.+ .|+++|.++|+++|+++++|+++..+.+|... ....++|+++++.+|+||.+ +|+++.++
T Consensus 220 tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~--------~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~ 291 (481)
T PRK04366 220 LGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKAR--------PGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKE 291 (481)
T ss_pred ccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCC--------ccccCCCEEEEechhhcCCCCCCCCCCeeeeeehh
Confidence 8877 58999999999999999999999765444211 11135699999999998632 26788888
Q ss_pred HHHHHHHhh-----CCcceecC------------CCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhccccc
Q psy15447 302 YIIEHHRLS-----GSGYCFSA------------SLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVT 362 (457)
Q Consensus 302 ~~~~~~~~~-----~~~~~~~~------------~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~ 362 (457)
++.+.+... ...+.++. +.+...+.++...+..+..+ .+..++..++++++++.|++ +
T Consensus 292 ~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~---~ 368 (481)
T PRK04366 292 ELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKD---I 368 (481)
T ss_pred hhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh---h
Confidence 777665210 11121111 11222223333333333221 23346677789999999988 2
Q ss_pred CCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHH
Q psy15447 363 QRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIE 442 (457)
Q Consensus 363 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~ 442 (457)
+++... ...+..+.+.... .........++.++|.++||.+....+|. ...+.+|++++..+|++|||++++
T Consensus 369 --~~~~~~-~~~~~~~~~~~~~-~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~----~~~~~l~is~~e~~t~edid~l~~ 440 (481)
T PRK04366 369 --YDLPYD-RPCMHEFVLSGKK-LKETGVRTLDIAKRLLDYGFHPPTIYFPL----IVPEALMIEPTETESKETLDAFIA 440 (481)
T ss_pred --CcccCC-CCeeEEEEEECcc-ccccCCCHHHHHHHHHHCCccCCcccccc----ccCCeEEEcccCCCCHHHHHHHHH
Confidence 222211 1111112221100 00000035679999999999876444331 125689999999999999999999
Q ss_pred HHHHHHHHhcCC
Q psy15447 443 TLCKSHDIAVQP 454 (457)
Q Consensus 443 ~l~~~~~~~~~~ 454 (457)
+|+++.+++.+.
T Consensus 441 ~l~~i~~~~~~~ 452 (481)
T PRK04366 441 AMKQIAEEAKEN 452 (481)
T ss_pred HHHHHHHHHHhC
Confidence 999998887654
No 270
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.91 E-value=1e-21 Score=192.48 Aligned_cols=299 Identities=16% Similarity=0.188 Sum_probs=202.6
Q ss_pred ChhhHHHHHHHHHhcCCCCCCCCC-ccc--ChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhc----CCC-C
Q psy15447 96 NPDIEKCAIDCIDKNGVGSCGPRG-FYG--TNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYV----KRN-D 165 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~~~~~~-~~g--~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~----~~g-d 165 (457)
++.+.+++.+.+.... +..+.+. .++ ..+..+++++++++++|.+ .+++++++++++..++.++. ++| +
T Consensus 11 ~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~ 89 (353)
T TIGR03235 11 DPAVAEAMLPWLLEEF-GNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGKK 89 (353)
T ss_pred CHHHHHHHHHHHHhcC-CCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCC
Confidence 5789999998886522 1222211 111 2356788999999999965 45555666789888887765 355 7
Q ss_pred EEEEeCcccHHHHHHH---HhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChH
Q psy15447 166 AVFVDENINFAIQTGL---IASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLK 237 (457)
Q Consensus 166 ~v~~~~~~h~~~~~~~---~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~ 237 (457)
.|++....|++..... ...|.++..++. .|++++++.++ +++++|++++++|++|.+.|++
T Consensus 90 ~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~-----------~~~~lv~~~~~~n~tG~~~~~~ 158 (353)
T TIGR03235 90 HIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIR-----------PDTLLVSIMHVNNETGSIQPIR 158 (353)
T ss_pred eeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCC-----------CCCEEEEEEcccCCceeccCHH
Confidence 8999988888765543 345778877654 37788887764 2457899999999999999999
Q ss_pred HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhhC--C--
Q psy15447 238 DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLSG--S-- 312 (457)
Q Consensus 238 ~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~~--~-- 312 (457)
+|.++|++||+++|+|++|++|... .++...++|+++.|.+|++|+.| |+++.+++..+..+... .
T Consensus 159 ~I~~l~~~~~~~~ivD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~g~g~l~~~~~~~~~~~~~~~~~~~ 229 (353)
T TIGR03235 159 EIAEVLEAHEAFFHVDAAQVVGKIT---------VDLSADRIDLISCSGHKIYGPKGIGALVIRKRGKPKAPLKPIMFGG 229 (353)
T ss_pred HHHHHHHHcCCEEEEEchhhcCCcc---------ccccccCCCEEEeehhhcCCCCceEEEEEccCcccccccCceeeCC
Confidence 9999999999999999999877542 23333467999999999988655 78877776432211000 0
Q ss_pred c---ceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC---CCeEEEEecCCcc
Q psy15447 313 G---YCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD---TPLKYLYLQKSDD 385 (457)
Q Consensus 313 ~---~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~ 385 (457)
. ....++.++...++..++++++.+. +...++++++.+++++.|++ .|+++..++. ..++.+.++..
T Consensus 230 ~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~----~g~~~~~~~~~~~~~i~~~~~~~~-- 303 (353)
T TIGR03235 230 GQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQT----LGVKLNGDPAETIPHILNFSIDGV-- 303 (353)
T ss_pred CCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc----CCeEEeCCcccccCCEEEEEeCCc--
Confidence 0 0112345666666677788876543 45778999999999999988 7888764322 33555554432
Q ss_pred hHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEec
Q psy15447 386 EVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCN 429 (457)
Q Consensus 386 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~ 429 (457)
...++.+.|. +||.++++..|..... .+..+|.++.
T Consensus 304 ------~~~~v~~~L~-~~i~v~~g~~~~~~~~-~~~~~l~~~g 339 (353)
T TIGR03235 304 ------NSEALIVNLR-ADAAVSTGSACSSSKY-EPSHVLQAMG 339 (353)
T ss_pred ------CHHHHHHHHh-CCeEEEchhhcCCCCC-CCCHHHHHcC
Confidence 3456778885 4899988876643111 1234555554
No 271
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.91 E-value=1e-21 Score=192.11 Aligned_cols=291 Identities=14% Similarity=0.148 Sum_probs=202.9
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHHH
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQHL 199 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~l 199 (457)
++...+|++++|++.+.+.+++++||++|+..++.+++++||.|++..+.|+.+.. .+...|.++..++..+.+.+
T Consensus 60 npt~~~Le~~iA~le~~~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l 139 (394)
T PRK09028 60 TPTHFAFQAAIVELEGGAGTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGI 139 (394)
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHH
Confidence 45567999999999998889999999999999999999999999998888876653 23446778877877777888
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV 279 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~ 279 (457)
++.+. +++++|++|++.||+|.+.++++|.++|++||+++++|++|+.+..-. .+ ..++
T Consensus 140 ~~~l~-----------~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~~---------Pl-~~Ga 198 (394)
T PRK09028 140 RELIR-----------PNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPINSR---------PF-EMGV 198 (394)
T ss_pred HHhcC-----------cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccccccCC---------cc-ccCc
Confidence 77764 356899999999999999999999999999999999999997653210 11 1356
Q ss_pred cEEEecCcccccCc----ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Q psy15447 280 DMIIGSLEHALGSV----GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSL 355 (457)
Q Consensus 280 Di~~~s~sK~lg~~----gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~ 355 (457)
|+++.|.+|++++. +|+++.++++.+.++... ...+..++|..|...+..|+-+. .++++..+++..+.+.
T Consensus 199 Divv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~--~~~G~~~~p~~a~l~~rgl~TL~---lR~~~~~~na~~la~~ 273 (394)
T PRK09028 199 DISIQAATKYIVGHSDVMLGTATANEKHWDQLREHS--YLMGQCTSPDDVYLAMRGLRTLG---VRLAQHEKNALKVANW 273 (394)
T ss_pred eEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHH--HhcCCCCCHHHHHHHHcccCcHH---HHHHHHHHHHHHHHHH
Confidence 99999999999654 577777777666554321 23455689999888877776553 4788899999999999
Q ss_pred hhcccccCCeEEecc--------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecc------ccCcc
Q psy15447 356 LSQHKVTQRFLVQGH--------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCP------SHLDQ 415 (457)
Q Consensus 356 L~~~~~~~~~~~~~~--------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~------~~~~~ 415 (457)
|++++.+..+..++- ..+.++.+.++... .....++.+.|.=-.+.++.+ .+|..
T Consensus 274 L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~-----~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~ 348 (394)
T PRK09028 274 LATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGD-----PKAVTALVEGMQHFKMGFSWGGFESLILGVFG 348 (394)
T ss_pred HhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCC-----HHHHHHHHHhCCcceEecccCCCcceeECCCC
Confidence 998543333222210 12568888886321 013456666654111111111 11110
Q ss_pred --------ccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447 416 --------EAKKQKPSIRITCNISHTEQDMNSLIETLC 445 (457)
Q Consensus 416 --------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 445 (457)
.....++.+||++.+...++=++.+.++|+
T Consensus 349 ~~~~~~~~~~~~~~~liR~svGlEd~~dLi~Dl~~Al~ 386 (394)
T PRK09028 349 INKLRTATNWDFSKPLIRLHIGLEDVDDLIADLEAGFE 386 (394)
T ss_pred cCccCchhhhcCCCCeEEEEeCcCCHHHHHHHHHHHHH
Confidence 001223689999988654444444444444
No 272
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.91 E-value=5.4e-21 Score=182.48 Aligned_cols=309 Identities=17% Similarity=0.192 Sum_probs=221.9
Q ss_pred hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccH
Q psy15447 97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINF 175 (457)
Q Consensus 97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~ 175 (457)
.+..+++.+.++.-... ..+...++|+++++++|.+.++.++||+.|+..+++++ .++||.|+++..++.
T Consensus 15 ~~e~~~v~~vl~sg~i~---------~G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~Tfv 85 (374)
T COG0399 15 EEELAAVQEVLKSGWLT---------GGPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFV 85 (374)
T ss_pred hHHHHHHHHHHHcCCee---------cChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchH
Confidence 45677777777752222 24567899999999999999999999999999999965 599999999999999
Q ss_pred HHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcE
Q psy15447 176 AIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR 249 (457)
Q Consensus 176 ~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~ 249 (457)
++..++...|++++.++-+ |++.+|+.|.. ++++|+.-+.+ |..+++++|.+||++||++
T Consensus 86 ATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~-----------~tKAIipVhl~---G~~~dm~~i~~la~~~~l~ 151 (374)
T COG0399 86 ATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITP-----------RTKAIIPVHLA---GQPCDMDAIMALAKRHGLP 151 (374)
T ss_pred HHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHccc-----------CCeEEEEehhc---cCCCCHHHHHHHHHHcCCe
Confidence 9999999999998887643 88999999864 46788877766 7799999999999999999
Q ss_pred EEEEcCcccccccCCCCccccccCCCCCCccEEEecC--cccccC-cccEEEec-HHHHHHHH---hhCCc------c--
Q psy15447 250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSL--EHALGS-VGGFCVGS-SYIIEHHR---LSGSG------Y-- 314 (457)
Q Consensus 250 li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~--sK~lg~-~gG~v~~~-~~~~~~~~---~~~~~------~-- 314 (457)
+|.|.+|++|..-. |+.. ..+| |+.+.|| .|.++. -||+++++ +++.+.++ ..+.. |
T Consensus 152 vIEDaAqa~Ga~y~-gk~v-Gt~G------d~~~fSF~~~K~ittgEGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~ 223 (374)
T COG0399 152 VIEDAAQAHGATYK-GKKV-GSFG------DIGAFSFHATKNLTTGEGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLH 223 (374)
T ss_pred EEEEcchhccCeec-Cccc-cccc------ceEEEEecCCCCccccCceEEEeCCHHHHHHHHHHHHhCcCCCcccccee
Confidence 99999999886532 2211 1233 5666677 788854 58887776 45555543 33322 1
Q ss_pred ---eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC-----CCeEEEEecCC-cc
Q psy15447 315 ---CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD-----TPLKYLYLQKS-DD 385 (457)
Q Consensus 315 ---~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~-----~~~~~i~~~~~-~~ 385 (457)
.+...++.+.+|.++..|+.+++ +.++-+++.+++.+.|++ .+++.+..... ..+..+.+... .
T Consensus 224 ~~~G~N~rm~~iqAAigl~QL~~l~~---~~~~R~~~a~~Y~~~l~~---~~~~~~p~~~~~~~~~~~~~~i~~~~~~~- 296 (374)
T COG0399 224 EELGYNYRLTEIQAAIGLAQLERLDE---INERRREIAQIYAEALKG---LPGITLPPEPDGAVHAWHLYTILVDEEGI- 296 (374)
T ss_pred eecccccCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhhc---CCCccccCCCCCceeeeeeeEEEecCCCC-
Confidence 22334788888888888887765 556666778888888887 33444332222 23344455543 2
Q ss_pred hHHHHHHHHHHHHHHHHcCee----EeccccCcc--cc--------CC----CCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 386 EVASKKLLQTICDMCIQAGFA----ITCPSHLDQ--EA--------KK----QKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 386 ~~~~~~~~~~~~~~l~~~Gi~----v~~~~~~~~--~~--------~~----~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
....+.+.|.++||. .+|...+.. .. +. ....+++.....+|++|+++++++|+++
T Consensus 297 ------~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~ 370 (374)
T COG0399 297 ------SRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEV 370 (374)
T ss_pred ------CHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 456789999999665 233211100 00 00 1456889888999999999999999988
Q ss_pred HH
Q psy15447 448 HD 449 (457)
Q Consensus 448 ~~ 449 (457)
+.
T Consensus 371 ~~ 372 (374)
T COG0399 371 LG 372 (374)
T ss_pred hc
Confidence 75
No 273
>PLN02397 aspartate transaminase
Probab=99.90 E-value=2.1e-21 Score=193.98 Aligned_cols=334 Identities=11% Similarity=0.019 Sum_probs=205.2
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhc--CCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcE----EEecc
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKN--GVGSCGPRGFYGTNVVHLDLENDIASFMGL----EET----ALYSF 148 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~--~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~----i~~~s 148 (457)
+...+|++.+.+.....+|.+.+++.+..... ......+....|..++++.+++.+.+..+. +.+ ++.++
T Consensus 47 ~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~ 126 (423)
T PLN02397 47 SPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGT 126 (423)
T ss_pred CcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccch
Confidence 34568887766545545565566666654322 111112223345545444444444332221 112 22233
Q ss_pred cHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447 149 GFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFI 221 (457)
Q Consensus 149 G~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~v 221 (457)
|+.++..++.+++.+||.|+++.++|..+...++..|.+++.++. .|++.+++.+++.. ++++++
T Consensus 127 Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~--------~~~~~i 198 (423)
T PLN02397 127 GSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAP--------DGSFVL 198 (423)
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCC--------CCCEEE
Confidence 444455555555679999999999999999999999999887753 26778877776432 356888
Q ss_pred EEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCc--cccccCCCCCCccEEEecCcccccCcc--
Q psy15447 222 IVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHG--VTEYFGVSTEEVDMIIGSLEHALGSVG-- 294 (457)
Q Consensus 222 i~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~--~~~~~~~~~~~~Di~~~s~sK~lg~~g-- 294 (457)
++.+++||||.+.+ +++|.++|++||+++|+||+|....++..... ....+....++ .|+++||||+++++|
T Consensus 199 ~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~-vI~~~SfSK~~~~~G~R 277 (423)
T PLN02397 199 LHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHE-ILVAQSYAKNMGLYGER 277 (423)
T ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCc-EEEEEECcccCCCcccc
Confidence 89999999999988 66888899999999999999976554321000 11111111122 488999999998765
Q ss_pred -cEEE---ecHHHHHHHH----hhCCcceecCCCcHHHHHHHHHHHHHH-------hhCcHHHHHHHHHHHHHHHHhhcc
Q psy15447 295 -GFCV---GSSYIIEHHR----LSGSGYCFSASLPPFLAVAANKALHLL-------KANPSLLTKLREKCNTMHSLLSQH 359 (457)
Q Consensus 295 -G~v~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~aaa~a~l~~~-------~~~~~~~~~l~~~~~~l~~~L~~~ 359 (457)
||++ +++++++.+. .... ..+. +.+.+.++++.+.|+.- +...+.+++++++.+.+.+.|+++
T Consensus 278 vG~~v~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~ 355 (423)
T PLN02397 278 VGALSVVCKSADVAVRVKSQLKLIAR-PMYS-NPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEAR 355 (423)
T ss_pred ceEEEEEeCCHHHHHHHHHHHHHHHh-cccC-CCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9973 4555544332 2111 1121 22444445554444221 111345678889999999999882
Q ss_pred cccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHH
Q psy15447 360 KVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMN 438 (457)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~ 438 (457)
....++++..+.++.++|+.+. .+++++|+++ ||++.+ .+ |+++.. .++++++
T Consensus 356 ~~~~~~~~~~p~gg~fl~~~l~------------~~~~~~Ll~~~~V~v~~-----------~~--Ri~~~~-~~~~~i~ 409 (423)
T PLN02397 356 GSPGDWSHITKQIGMFSFTGLN------------KEQVDRMTKEYHIYMTR-----------DG--RISMAG-LSSKNVP 409 (423)
T ss_pred CCCCCCCcccCCceEEEecCCC------------HHHHHHHHHhCCEEECC-----------CC--eEEEee-CCHHHHH
Confidence 1001255544556667776552 1477777654 999852 12 888853 6899999
Q ss_pred HHHHHHHHHHH
Q psy15447 439 SLIETLCKSHD 449 (457)
Q Consensus 439 ~~~~~l~~~~~ 449 (457)
+++++|++++.
T Consensus 410 ~~~~~i~~~~~ 420 (423)
T PLN02397 410 YLADAIHAVVT 420 (423)
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 274
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.90 E-value=6.3e-21 Score=188.31 Aligned_cols=344 Identities=13% Similarity=0.093 Sum_probs=221.5
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIA 158 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~ 158 (457)
|..+|||-+-. +...+.++..+++..-..+ |+...-..+|++.+++++|.+.++.+++|+.|+..++.
T Consensus 19 ~~v~iDlltds-----~t~ams~~~~~a~~~gd~~-------Y~~~~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~~ 86 (431)
T cd00617 19 EDVYIDLLTDS-----GTGAMSDYQWAAMMLGDEA-------YAGSKSFYDLEDAVQDLFGFKHIIPTHQGRGAENILFS 86 (431)
T ss_pred CCcCCCCCCCC-----CcHHHHHHHHHHHHhCCCc-------cCCCCCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHH
Confidence 45566665421 1245666656666531112 22333457999999999999999999999999999999
Q ss_pred hhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC---------------CCHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447 159 AYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH---------------NNMQHLEELLRQQDERDTLNSKVTKKFIIV 223 (457)
Q Consensus 159 a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~---------------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~ 223 (457)
+++++||.| ...+.+.++...+...|++++.++. .|+++|++.+.+.. ..++++|++
T Consensus 87 al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~-------~~~~~~I~v 158 (431)
T cd00617 87 ILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVG-------AENIPYIVL 158 (431)
T ss_pred HhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCccc-------CCCccEEEE
Confidence 999999987 4666666677778888877665432 37889999986531 134678888
Q ss_pred ecCCCCC-CCCCC---hHHHHHHHHHcCcEEEEEcCcccc-cc-------cCCCCcccc----ccCCCCCCccEEEecCc
Q psy15447 224 EGVYMNS-ADICP---LKDILSLRSKYQARIFVDESVSFG-TL-------GSTGHGVTE----YFGVSTEEVDMIIGSLE 287 (457)
Q Consensus 224 e~v~~~~-G~i~~---l~~i~~l~~~~g~~li~DEa~~~g-~~-------g~~g~~~~~----~~~~~~~~~Di~~~s~s 287 (457)
+.++|++ |.+.+ +++|+++|++||++||.|+++..+ .+ |..+..+.+ .+. -.|.+..|+.
T Consensus 159 ~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s----~sd~~~mS~~ 234 (431)
T cd00617 159 TITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFS----YADGCTMSAK 234 (431)
T ss_pred ECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhc----cCCEEEEEee
Confidence 8888886 88876 568899999999999999997543 11 111111111 111 1256666777
Q ss_pred ccccC-cccEEEecH-HHHHHHHhhC---CcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccccc
Q psy15447 288 HALGS-VGGFCVGSS-YIIEHHRLSG---SGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVT 362 (457)
Q Consensus 288 K~lg~-~gG~v~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~ 362 (457)
|..+. .||++++++ ++++.++... .++...+++++-..++...+|+...+ .+..++..++.+++.+.|++
T Consensus 235 K~~~~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~-~~~l~~~~~~r~~l~~~L~~---- 309 (431)
T cd00617 235 KDGLVNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE-EDYLRHRVEQVRYLGDRLDE---- 309 (431)
T ss_pred cCCCCccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHH----
Confidence 86643 488999986 5888876432 22222233455544443334433211 22334444466899999998
Q ss_pred CCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHH-cCeeEecccc------Ccc-c-cCCCCCeEEEEecC-C
Q psy15447 363 QRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQ-AGFAITCPSH------LDQ-E-AKKQKPSIRITCNI-S 431 (457)
Q Consensus 363 ~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~-~Gi~v~~~~~------~~~-~-~~~~~~~lRi~~~~-~ 431 (457)
.|+++..+.+++.+++.+..-.+. ...+....+++.+|.+ .||.+...+- |.. + ....-+.+|+.+|- .
T Consensus 310 ~G~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~ 389 (431)
T cd00617 310 AGVPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRV 389 (431)
T ss_pred CCCCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccc
Confidence 688888777788888876531000 0001135678866665 4888653221 111 0 01124789999875 6
Q ss_pred CCHHHHHHHHHHHHHHHHHh
Q psy15447 432 HTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 432 ~t~edi~~~~~~l~~~~~~~ 451 (457)
.|.+++|.++++|..+.+..
T Consensus 390 ~t~~~~~~~~~~~~~~~~~~ 409 (431)
T cd00617 390 YTQDHMDYVAAAVIALYERR 409 (431)
T ss_pred cCHHHHHHHHHHHHHHHhhH
Confidence 79999999999999988754
No 275
>PLN02509 cystathionine beta-lyase
Probab=99.90 E-value=1.7e-21 Score=193.91 Aligned_cols=288 Identities=14% Similarity=0.171 Sum_probs=200.5
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHH----HHHHhcCCeEEEecCCCHHHH
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQ----TGLIASRCKVQYFKHNNMQHL 199 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~----~~~~~~g~~~~~~~~~d~~~l 199 (457)
++...+++++++++.|.+.++++++|..|+..++ .++++||.|++..+.|+.+. ..+...|.++..++..|++++
T Consensus 132 npt~~aLE~~lA~leg~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e~l 210 (464)
T PLN02509 132 NPTRDALESLLAKLDKADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLDEV 210 (464)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHHHH
Confidence 4678999999999999999999999998875444 67899999999999988765 334567888889988899888
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV 279 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~ 279 (457)
++.+. +++++|++|+++||+|.+.++++|.++|++||+++|+|++++.+..+. . .+ .++
T Consensus 211 ~~ai~-----------~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~---p----l~---~ga 269 (464)
T PLN02509 211 AAAIG-----------PQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSR---P----LE---LGA 269 (464)
T ss_pred HHhCC-----------cCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCC---h----hh---cCC
Confidence 88774 356899999999999999999999999999999999999987765432 1 11 245
Q ss_pred cEEEecCcccccC----cccEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447 280 DMIIGSLEHALGS----VGGFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS 354 (457)
Q Consensus 280 Di~~~s~sK~lg~----~gG~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~ 354 (457)
|+++.|++|++++ .||+++++ +.+.+.++... ...+..++|..|+.++..|+.+. .++++.++++.++.+
T Consensus 270 Divv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~--~~~g~~l~p~~A~l~lr~L~tL~---~R~~r~~~nA~~la~ 344 (464)
T PLN02509 270 DIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQ--NSEGSGLAPFDCWLCLRGIKTMA---LRIEKQQENARKIAM 344 (464)
T ss_pred cEEEecCcccccCCCccceeEEEeccHHHHHHHHHHH--HhcCCCcCHHHHHHHHhhhhhHH---HHHHHHHHHHHHHHH
Confidence 8999999999964 25777764 43433332111 11233478999999988888774 378899999999999
Q ss_pred HhhcccccCCeEEecc--------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecc------ccCc
Q psy15447 355 LLSQHKVTQRFLVQGH--------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCP------SHLD 414 (457)
Q Consensus 355 ~L~~~~~~~~~~~~~~--------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~------~~~~ 414 (457)
.|++++.+..+..++- ..+.++.+.+++.. .+.++.+.|.=-.+.+..+ .+|.
T Consensus 345 ~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~~~-------~~~~f~~~l~l~~~a~slG~~~SLi~~p~ 417 (464)
T PLN02509 345 YLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVA-------LSKHLVETTKYFSIAVSFGSVKSLISMPC 417 (464)
T ss_pred HHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeCCHH-------HHHHHHHcCCcceEcccCCCCCceeeCCc
Confidence 9998543333322221 12557777774221 4455666554111111111 1111
Q ss_pred c------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 415 Q------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 415 ~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
. .....++.+|+++.+. +.|.+++-|+++++
T Consensus 418 ~~sh~~~~~~~~~~~Gi~~~liRlSvGlE----~~~DLi~Dl~~Al~ 460 (464)
T PLN02509 418 FMSHASIPAEVREARGLTEDLVRISAGIE----DVDDLISDLDIAFR 460 (464)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHc
Confidence 1 0112357899999864 45555555555554
No 276
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=5.5e-21 Score=188.86 Aligned_cols=293 Identities=16% Similarity=0.156 Sum_probs=201.6
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~ 198 (457)
..+...+|++++|++.|.+.+++++||++|+..++.+++++||.|++..+.|+..... ....|.++..++..|+++
T Consensus 58 ~~p~~~~Le~~lA~l~g~~~~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~ 137 (405)
T PRK08776 58 GNPTRDLLGEALAELEGGAGGVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRS 137 (405)
T ss_pred CChHHHHHHHHHHHHhCCCceEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence 4566788999999999998999999999999999999999999999998888764432 344577888888888999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.+++ ++++|++++++||+|.+.++++|.++|++||+++|+||+|..+..- . .+. .+
T Consensus 138 l~~~i~~-----------~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~---~------pl~-~g 196 (405)
T PRK08776 138 LADALAQ-----------SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQ---K------PLE-FG 196 (405)
T ss_pred HHHhcCc-----------CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccC---C------ccc-cc
Confidence 8887743 4578899999999999999999999999999999999998654211 1 111 24
Q ss_pred ccEEEecCcccccCc----ccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGSV----GGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 279 ~Di~~~s~sK~lg~~----gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~ 353 (457)
+|+++.|.+|.+++. ||++++ ++++.+.++.... ..+..++|+.++..+..++.++ .++++..+|...+.
T Consensus 197 aDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~--~~g~~~s~~~a~l~~~gl~tl~---~r~~~~~~na~~la 271 (405)
T PRK08776 197 ADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWAN--ALGLTGSPFDAFLTLRGLRTLD---ARLRVHQENADAIA 271 (405)
T ss_pred CCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHH--hcCCCCCHHHHHHHHhhhCcHH---HHHHHHHHHHHHHH
Confidence 589999999999643 476655 5677666643221 1233468888888877766553 47889999999999
Q ss_pred HHhhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecc------ccC
Q psy15447 354 SLLSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCP------SHL 413 (457)
Q Consensus 354 ~~L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~------~~~ 413 (457)
+.|++++.+..+..++ ...+.++.+.++.+. ....++.+.|.=-.+..+.+ .+|
T Consensus 272 ~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~------~~~~~f~~~l~l~~~~~s~G~~~sl~~~p 345 (405)
T PRK08776 272 ALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGE------AAVRAFVDGLRYFTLAESLGGVESLIAHP 345 (405)
T ss_pred HHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCH------HHHHHHHHhCCcceEccCCCCCceEEECC
Confidence 9998844332222211 112557888886432 13455666554211111111 111
Q ss_pred cc----c--------cCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 414 DQ----E--------AKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 414 ~~----~--------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
.. . ....++.+|+++.+...++=++.+-++|+++
T Consensus 346 ~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~~~ 391 (405)
T PRK08776 346 ASMTHAAMTAEARAAAGISDGLLRLSVGIESAEDLLIDLRAGLARA 391 (405)
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 11 0 0122568999999876555445555555443
No 277
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=2.2e-21 Score=191.34 Aligned_cols=295 Identities=11% Similarity=0.076 Sum_probs=203.1
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~ 198 (457)
.++...+|+++++++.|.+.+++++||++|+..++.+++++||.|++..+.|+.+.. .....|.++..++..+.++
T Consensus 63 ~~pt~~~Le~~lA~l~g~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~ 142 (394)
T PRK07050 63 ATPTSLALAQRLAEIEGGRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAG 142 (394)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHH
Confidence 356678999999999999999999999999999999999999999999999887553 3456688888888767777
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.++ +++++|++|++.|++|.+.++++|.++|+++|+++|+|++|+.|..- + +.. .+
T Consensus 143 l~~~i~-----------~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~---~------~l~-~G 201 (394)
T PRK07050 143 IADLIQ-----------PNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAF---K------PFE-HG 201 (394)
T ss_pred HHHhcC-----------CCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccccccc---C------HHH-cC
Confidence 877764 35689999999999999999999999999999999999999876432 1 111 24
Q ss_pred ccEEEecCcccccC----cccEE-EecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGS----VGGFC-VGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 279 ~Di~~~s~sK~lg~----~gG~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~ 353 (457)
+|+++.|++|.+++ .||++ ++++++++.++... ...+.+.+|..+..++..++.+ ..++++..+++.++.
T Consensus 202 aDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~--~~~G~~~~~~~a~l~lr~l~tl---~~Rl~~~~~~a~~la 276 (394)
T PRK07050 202 VDISVQALTKYQSGGSDVLMGATITADAELHAKLKLAR--MRLGIGVSADDCSLVLRGLPSL---QVRLAAHDRSALEVA 276 (394)
T ss_pred CeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHH--HhcCCCCCHHHHHHHHcCCCcH---HHHHHHHHHHHHHHH
Confidence 58999999999953 25654 45677777775432 2234566777766555444333 346777778888888
Q ss_pred HHhhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc----
Q psy15447 354 SLLSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ---- 415 (457)
Q Consensus 354 ~~L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~---- 415 (457)
+.|++.+.+..+..++ ...+.++.+.+..... .....++.+.|...++.++.+..-+.
T Consensus 277 ~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~----~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~ 352 (394)
T PRK07050 277 EWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYS----PAQVDAFVEALELFAIGWSWGGACSLAMPY 352 (394)
T ss_pred HHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCC----HHHHHHHHHcCCCCeeccccCCccceEeeC
Confidence 8888743222211111 0124567777754210 11456777777766654443322110
Q ss_pred --------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 416 --------EAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 416 --------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
+....++.+|+++.+...++=++.+.++|+.+
T Consensus 353 ~~~~~~~~~~~~~~~~iR~svGlE~~~dl~~dl~~al~~~ 392 (394)
T PRK07050 353 DVASMRTAKWPHRGTLVRLYIGLEDEADLIADLEQALEAA 392 (394)
T ss_pred cccccchhhcCCCCCEEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 11123468999998765444455555555543
No 278
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.90 E-value=1.4e-21 Score=194.27 Aligned_cols=327 Identities=11% Similarity=0.037 Sum_probs=204.4
Q ss_pred eeEEeecCCcc--CCC-C-ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcE--EEecccH
Q psy15447 81 PCINFATHNYL--SFV-E-NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEET--ALYSFGF 150 (457)
Q Consensus 81 ~~id~~s~~~l--~~~-~-~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~--i~~~sG~ 150 (457)
..|||+.+.+. +.. . .+.+.+++.+.++.... ..+....|..++.+.+++.+.+..+ .++. +++++++
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~--~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~ 104 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETT--KNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGT 104 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhcccccC--CCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCcc
Confidence 46888876431 111 1 25677777766543211 1222334565555555555544332 2233 4555666
Q ss_pred HHHHHHHHhh--cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447 151 STSASAIAAY--VKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFI 221 (457)
Q Consensus 151 ~a~~~ai~a~--~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~v 221 (457)
+|+..++.++ +++||.|+++.++|..+...++..|.+++.++. .|++++++.+++.. .+++++
T Consensus 105 ~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~--------~~~~~~ 176 (396)
T PRK09257 105 GALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAP--------AGDVVL 176 (396)
T ss_pred HHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCC--------CCCEEE
Confidence 8988888665 489999999999999999999999999887763 26788888876532 335788
Q ss_pred EEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCC--CCccccccCCCCCCccEEEecCcccccCcc--
Q psy15447 222 IVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGST--GHGVTEYFGVSTEEVDMIIGSLEHALGSVG-- 294 (457)
Q Consensus 222 i~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~--g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-- 294 (457)
++.+++||||.+.+ +++|.++|++||+++|+||+|+...++.. -..+....+. .++ .|+++||||.++.+|
T Consensus 177 i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~-~~~-vi~i~SfSK~~~~~GlR 254 (396)
T PRK09257 177 LHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAA-GLE-LLVASSFSKNFGLYGER 254 (396)
T ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhc-CCc-EEEEEEcCCcCcccccc
Confidence 88999999999988 67889999999999999999875333200 0111111111 123 488999999998655
Q ss_pred -cEEEe---cHHH----HHHHHhhCCcceecCCCcHHHHHHHHHHHHH-------HhhCcHHHHHHHHHHHHHHHHhhcc
Q psy15447 295 -GFCVG---SSYI----IEHHRLSGSGYCFSASLPPFLAVAANKALHL-------LKANPSLLTKLREKCNTMHSLLSQH 359 (457)
Q Consensus 295 -G~v~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~-------~~~~~~~~~~l~~~~~~l~~~L~~~ 359 (457)
||+++ +++. +..+..... ..+. +.+++...++.+.+.. .+..++.+++++++.+.+.+.|++.
T Consensus 255 iG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~ 332 (396)
T PRK09257 255 VGALSVVAEDAEEADRVLSQLKATIR-TNYS-NPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAK 332 (396)
T ss_pred ceeEEEEeCCHHHHHHHHHHHHHHhh-hhcC-CCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99862 4333 333322111 1122 1244444444433321 1112346778888999999999883
Q ss_pred cccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHH-HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHH
Q psy15447 360 KVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMC-IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMN 438 (457)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~ 438 (457)
....++.+..+.++.++|+.+.. +++..+ .++||++.+ .+ ||+++. .++++|+
T Consensus 333 ~~~~~~~~~~p~gg~~~w~~l~~------------~~~~~l~~~~~V~~~p-----------~~--ri~~~~-~~~~~i~ 386 (396)
T PRK09257 333 GPSRDFDFIARQRGMFSYSGLTP------------EQVDRLREEFGVYAVG-----------SG--RINVAG-LNESNID 386 (396)
T ss_pred CCCCCcccccccceEEEecCCCH------------HHHHHHHHcCCEEEcC-----------CC--eEEEee-CCHHHHH
Confidence 10013555545567777776531 233444 566998753 12 888854 7899999
Q ss_pred HHHHHHHHH
Q psy15447 439 SLIETLCKS 447 (457)
Q Consensus 439 ~~~~~l~~~ 447 (457)
++++.|+++
T Consensus 387 ~~~~~i~~~ 395 (396)
T PRK09257 387 YVAEAIAAV 395 (396)
T ss_pred HHHHHHHhh
Confidence 999999875
No 279
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.90 E-value=2.1e-21 Score=190.75 Aligned_cols=289 Identities=14% Similarity=0.144 Sum_probs=201.7
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHHH
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQHL 199 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~l 199 (457)
.+...+|++++++++|.+.++++++|+.|+..++. ++++||.|++..+.|+++... +...|.++..++..|++++
T Consensus 46 ~p~~~~le~~la~l~g~~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~~l 124 (378)
T TIGR01329 46 NPTRTALESLLAKLDKADRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLDKV 124 (378)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHHHH
Confidence 45678999999999999999999999998887665 789999999998888776543 3456899999998899999
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV 279 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~ 279 (457)
++.++ +++++|++|++.|++|.+.|+++|.++|++||+++|+|++++.+... ..+ + .++
T Consensus 125 e~~i~-----------~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~---~~l----~---~g~ 183 (378)
T TIGR01329 125 KAALG-----------PKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLC---NPL----E---LGA 183 (378)
T ss_pred HHhcC-----------cCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccC---Chh----h---cCC
Confidence 88874 35689999999999999999999999999999999999998654321 111 1 245
Q ss_pred cEEEecCcccccCc----ccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447 280 DMIIGSLEHALGSV----GGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS 354 (457)
Q Consensus 280 Di~~~s~sK~lg~~----gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~ 354 (457)
|+++.|++|.+++. ||++++ ++.+.+.++... ...+..++|..++.++..++. .+.++++..+++..+.+
T Consensus 184 Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~--~~~G~~~~~~~a~l~~~~l~t---l~~R~e~~~~na~~la~ 258 (378)
T TIGR01329 184 DIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQ--NSTGSGLAPFDCWLLLRGIKT---LAIRIEKQQENARAIAM 258 (378)
T ss_pred cEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHH--HhcCCcCCHHHHHHHHccCCC---HHHHHHHHHHHHHHHHH
Confidence 89999999999642 688766 455555554322 113445677776655554433 34577888888888888
Q ss_pred HhhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc------Cc
Q psy15447 355 LLSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH------LD 414 (457)
Q Consensus 355 ~L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------~~ 414 (457)
.|+++..+..+...+ ...+.++.+.+++.. .+.++++.|...++.++.+.. |.
T Consensus 259 ~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~-------~~~~~~~~L~~~~i~~s~G~~~sl~~~p~ 331 (378)
T TIGR01329 259 FLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVA-------LSKRLVEATKLFSITVSFGSVNSLISMPC 331 (378)
T ss_pred HHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHH-------HHHHHHHhCcCcccccCCCCCCceeeCCC
Confidence 888743221111111 122568888884321 466888888655666655433 21
Q ss_pred c----c--------cCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 415 Q----E--------AKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 415 ~----~--------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
. . ....++.+|+++.+. |.+.+++-|+++++.
T Consensus 332 ~~~~~~~~~~~~~~~gi~~~liR~svGlE----~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 332 FMSHASIPAEVREERGLPEDLVRLSVGIE----DVDDLISDLDIAFVT 375 (378)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHHh
Confidence 1 0 011256899999864 455555555555543
No 280
>PRK07049 methionine gamma-lyase; Validated
Probab=99.90 E-value=3.6e-21 Score=191.45 Aligned_cols=295 Identities=15% Similarity=0.180 Sum_probs=203.6
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEec-CCCHHH
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFK-HNNMQH 198 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~-~~d~~~ 198 (457)
++....|++.||++.|.+.+++++||++|+..++.+++++||.|+++.+.|+.+... +...|.+++.++ ..|+++
T Consensus 82 ~Pt~~~Le~~lA~leg~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~ 161 (427)
T PRK07049 82 HPNSEIVEDRLAVYEGAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAA 161 (427)
T ss_pred CcCHHHHHHHHHHHhCCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHH
Confidence 455789999999999999999999999999999999999999999999988776544 345677755544 567888
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHH------cCcEEEEEcCcccccccCCCCcccccc
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSK------YQARIFVDESVSFGTLGSTGHGVTEYF 272 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~------~g~~li~DEa~~~g~~g~~g~~~~~~~ 272 (457)
+++.+.+... .+++++|++|+++||+|.+.++++|.+++++ +++++|+||++..... . .
T Consensus 162 l~~~l~~~~~------~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~-~--~------ 226 (427)
T PRK07049 162 IGAAAEAAAA------KGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVF-Q--K------ 226 (427)
T ss_pred HHHHHHhhcc------CCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcccccc-C--C------
Confidence 8887764321 1356899999999999999999999999988 8999999999643211 0 0
Q ss_pred CCCCCCccEEEecCcccccC----cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHH
Q psy15447 273 GVSTEEVDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREK 348 (457)
Q Consensus 273 ~~~~~~~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~ 348 (457)
.+. .+.||++.|+||.+|+ .+||+++++++++.++... ..++..++|..+.+++..++.+. .++++..++
T Consensus 227 pl~-~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~--~~~g~~ls~~~a~l~~r~L~tl~---~R~~~~~~~ 300 (427)
T PRK07049 227 PLE-HGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALR--SAIGTQLDPHSCWMLGRSLETLV---LRMERANRN 300 (427)
T ss_pred ccc-cCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHH--HhcCCCCCHHHHHHHHcCCChHH---HHHHHHHHH
Confidence 111 2348999999999974 3599999999888876533 23455678988888887776543 356777889
Q ss_pred HHHHHHHhhcccccCCeEEecc----------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecc--
Q psy15447 349 CNTMHSLLSQHKVTQRFLVQGH----------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCP-- 410 (457)
Q Consensus 349 ~~~l~~~L~~~~~~~~~~~~~~----------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~-- 410 (457)
+..+.+.|++++.+..+..++- ..+.++.+.++++. ..+.++++.|.=-.+.++.+
T Consensus 301 a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~~------~~~~~f~~~l~l~~~~~slG~~ 374 (427)
T PRK07049 301 ARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGGQ------AAAFRFLNALQIFKLAVSLGGT 374 (427)
T ss_pred HHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCCH------HHHHHHHHcCcccEEcccCCCC
Confidence 9999999998543332222210 12557888876432 13455666554212111111
Q ss_pred ----ccCcc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 411 ----SHLDQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 411 ----~~~~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
.+|.. .....++.+||++.+. |.|.+++-|+++++
T Consensus 375 ~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE----~~~dl~~dl~~al~ 425 (427)
T PRK07049 375 ESLASHPASMTHSGVPADVRERIGVLESTIRLSIGIE----HPDDLIADLAQALD 425 (427)
T ss_pred CceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCcC----CHHHHHHHHHHHHh
Confidence 11111 0112256899999864 45555555555543
No 281
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.90 E-value=1.2e-20 Score=185.10 Aligned_cols=308 Identities=16% Similarity=0.179 Sum_probs=213.5
Q ss_pred hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccH
Q psy15447 97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINF 175 (457)
Q Consensus 97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~ 175 (457)
.+..+++.+.++.-..+ ...+...++|+++++++|.+.++.++||+.|+..++.++ .++||.|+++...+.
T Consensus 5 ~e~~~~v~~~l~s~~~~--------~~g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~ 76 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLS--------TYGPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFP 76 (363)
T ss_dssp HHHHHHHHHHHHHTCCS--------SSSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-T
T ss_pred HHHHHHHHHHHHhCCcc--------CCCHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcch
Confidence 45567777777762211 115778999999999999999999999999999999987 479999999999999
Q ss_pred HHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcE
Q psy15447 176 AIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR 249 (457)
Q Consensus 176 ~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~ 249 (457)
++..++...|.+++.++.+ |++++++.+.+ ++++|++.+.+ |..+++++|.++|++||++
T Consensus 77 ~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~-----------~t~ai~~~h~~---G~~~d~~~i~~~~~~~~i~ 142 (363)
T PF01041_consen 77 ATASAILWAGAEPVFVDIDPETLNIDPEALEKAITP-----------KTKAILVVHLF---GNPADMDAIRAIARKHGIP 142 (363)
T ss_dssp HHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHT-----------TEEEEEEE-GG---GB---HHHHHHHHHHTT-E
T ss_pred HHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhcc-----------CccEEEEecCC---CCcccHHHHHHHHHHcCCc
Confidence 9999999999999887643 79999999874 44788777766 6788999999999999999
Q ss_pred EEEEcCcccccccCCCCccccccCCCCCCccEEEecC--ccccc-CcccEEEec-HHHHHHHHhh---CC------c---
Q psy15447 250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSL--EHALG-SVGGFCVGS-SYIIEHHRLS---GS------G--- 313 (457)
Q Consensus 250 li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~--sK~lg-~~gG~v~~~-~~~~~~~~~~---~~------~--- 313 (457)
||.|.+|++|..-. |+.. ..+| |+.+.|| +|.+. +.||+++.+ +++.+.++.. +. .
T Consensus 143 lIeD~a~a~g~~~~-g~~~-G~~g------d~~~fSf~~~K~i~~geGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 214 (363)
T PF01041_consen 143 LIEDAAQAFGARYK-GRPV-GSFG------DIAIFSFHPTKIITTGEGGAVVTNDPELAERARALRNHGRSRDAFRRYRH 214 (363)
T ss_dssp EEEE-TTTTT-EET-TEET-TSSS------SEEEEESSTTSSS-SSS-EEEEESTHHHHHHHHHHTBTTEETSECSTTEE
T ss_pred EEEccccccCceeC-CEec-cCCC------CceEecCCCCCCCcCCCCeeEEecHHHHHHHhhhhhccCcCccccccccc
Confidence 99999999876421 2211 1122 6888898 58884 457887775 5555555431 11 1
Q ss_pred ---ceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC------CCeEEEEecCCc
Q psy15447 314 ---YCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD------TPLKYLYLQKSD 384 (457)
Q Consensus 314 ---~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~------~~~~~i~~~~~~ 384 (457)
..+...++++.++.++..|+.+++ ..++-+++.+++.+.|++ .+++....... ...+++.+++..
T Consensus 215 ~~~~g~n~rm~~~~AAigl~QL~~L~~---~~~~R~~~a~~y~~~L~~---~~~~~~~~~~~~~~~~~~~~f~i~~~~~~ 288 (363)
T PF01041_consen 215 ELPPGYNFRMSELQAAIGLAQLKRLDE---IIARRRENAQRYREALAG---IPGIKPPPIPDGAERSSYYRFPIRLPDEA 288 (363)
T ss_dssp SSSS--B-B-BHHHHHHHHHHHHTHHH---HHHHHHHHHHHHHHHHTT---GTTEEEEGCGTTTEEBCESSEEEEETCCG
T ss_pred cccCCcccccHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHhc---CCCcccccccccccccccccccccccccc
Confidence 122334799998988888877754 567777889999999988 56664433222 234566666541
Q ss_pred chHHHHHHHHHHHHHHHHcCeeEecccc-CccccC---------C-C--------CCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447 385 DEVASKKLLQTICDMCIQAGFAITCPSH-LDQEAK---------K-Q--------KPSIRITCNISHTEQDMNSLIETLC 445 (457)
Q Consensus 385 ~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-~~~~~~---------~-~--------~~~lRi~~~~~~t~edi~~~~~~l~ 445 (457)
.. ...++.+.|.++||...+... |....+ . . ...+.+..+...|++|+++++++|+
T Consensus 289 ~~-----~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 289 LA-----DRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp CS-----THHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred cc-----hHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 00 346799999999999887552 221000 0 0 3358888889999999999999885
No 282
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.90 E-value=2.3e-20 Score=183.10 Aligned_cols=312 Identities=13% Similarity=0.113 Sum_probs=210.6
Q ss_pred hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccH
Q psy15447 97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINF 175 (457)
Q Consensus 97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~ 175 (457)
++..+++.+.+.. +. .+|..+...++++.+++++|.+.+++++||++|+..++.++ .++||.|+++.+.|.
T Consensus 11 ~~e~~a~~~~~~~-~~-------~~~~g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~ 82 (376)
T TIGR02379 11 GQELEYIAEAISE-GK-------LSGDGPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFV 82 (376)
T ss_pred HHHHHHHHHHHHc-CC-------ccCCcHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcH
Confidence 4557777777764 21 12345678999999999999999999999999999888887 799999999999999
Q ss_pred HHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcE
Q psy15447 176 AIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR 249 (457)
Q Consensus 176 ~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~ 249 (457)
++...+...|.+++.++.+ |++++++.+.. ++++|+. .+++|...++++|.++|++||++
T Consensus 83 ~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-----------~tk~Iip---~~~~G~~~d~~~I~~la~~~~i~ 148 (376)
T TIGR02379 83 STANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-----------RTKAIVP---VHYAGVACDMDTIMALANKHQLF 148 (376)
T ss_pred HHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-----------CceEEEE---eCCCCCccCHHHHHHHHHHCCCE
Confidence 9998888889998887643 67778777642 3456653 34679999999999999999999
Q ss_pred EEEEcCcccccccCCCCccccccCCCCCCccEEEecCc--cccc--CcccEEEec-HHHHHHHHhh---CCc--------
Q psy15447 250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE--HALG--SVGGFCVGS-SYIIEHHRLS---GSG-------- 313 (457)
Q Consensus 250 li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s--K~lg--~~gG~v~~~-~~~~~~~~~~---~~~-------- 313 (457)
+|+|++|++|.. ..|+. .|. -.|+.+.||+ |.+. +.||+++.+ +++.+.++.. +..
T Consensus 149 vIeDaa~~~g~~-~~~~~----~g~---~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 220 (376)
T TIGR02379 149 VIEDAAQGVMST-YKGRA----LGS---IGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGE 220 (376)
T ss_pred EEEECccccCCc-cCCcc----cCC---CCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCccccccC
Confidence 999999998752 11211 111 1145555553 6563 367876665 7777776532 100
Q ss_pred --------ceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec--cCC---CCeEEEEe
Q psy15447 314 --------YCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG--HRD---TPLKYLYL 380 (457)
Q Consensus 314 --------~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~--~~~---~~~~~i~~ 380 (457)
..+...++.+.++.+++.|+.+++ ..++-+++.++..+.|+.+.......+.. +.. ..++++.+
T Consensus 221 ~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~---~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (376)
T TIGR02379 221 VDKYTWRDIGSSYLPSELQAAYLWAQLEQADR---INQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKL 297 (376)
T ss_pred CCcceeeeecccCCccHHHHHHHHHHHHHhHH---HHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEE
Confidence 112223567777777777777655 45566666777777776521001122211 111 12445555
Q ss_pred cCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccC--------C---------CCCeEEEEecCCCCHHHHHHHHHH
Q psy15447 381 QKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAK--------K---------QKPSIRITCNISHTEQDMNSLIET 443 (457)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~--------~---------~~~~lRi~~~~~~t~edi~~~~~~ 443 (457)
.... ...++.+.|.++||..+....|....+ . ....+.+.++..+|++|+++++++
T Consensus 298 ~~~~-------~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~ 370 (376)
T TIGR02379 298 KDED-------DRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQT 370 (376)
T ss_pred CCcC-------CHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHH
Confidence 4322 346899999999998764332322111 0 034688888888999999999999
Q ss_pred HHHHH
Q psy15447 444 LCKSH 448 (457)
Q Consensus 444 l~~~~ 448 (457)
|++++
T Consensus 371 i~~~~ 375 (376)
T TIGR02379 371 ICDYL 375 (376)
T ss_pred HHHHh
Confidence 98864
No 283
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.90 E-value=1.1e-20 Score=186.83 Aligned_cols=316 Identities=17% Similarity=0.151 Sum_probs=216.6
Q ss_pred hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccH
Q psy15447 97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINF 175 (457)
Q Consensus 97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~ 175 (457)
++-.+++.+.++.... ...+...++++.+++++|.+.+++++||++|+..++.++ .++||.|+++.+.|.
T Consensus 10 ~~~~~~v~~~~~~~~~---------~~g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~ 80 (380)
T TIGR03588 10 QDDIDAVVEVLKSDFL---------TQGPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALGVGPGDRVWTTPITFV 80 (380)
T ss_pred HHHHHHHHHHHhcCCc---------cCChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchH
Confidence 4456777777765211 123456889999999999999999999999999999988 789999999999999
Q ss_pred HHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcE
Q psy15447 176 AIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR 249 (457)
Q Consensus 176 ~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~ 249 (457)
++...+...|.+++.++. .|++++++.+++.. .+++++|+.. +++|...++++|.++|++||++
T Consensus 81 ~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~-------~~~t~~v~~~---~~~G~~~~~~~i~~l~~~~~~~ 150 (380)
T TIGR03588 81 ATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAK-------GKLPKAIVPV---DFAGKSVDMQAIAALAKKHGLK 150 (380)
T ss_pred HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhccc-------CCCceEEEEe---CCCCccCCHHHHHHHHHHcCCE
Confidence 998888889998887754 37889998886421 1234566543 3568899999999999999999
Q ss_pred EEEEcCcccccccCCCCccccccCCCCCCccEEEecCc--cccc-CcccEEEe-cHHHHHHHHhh---CCc---------
Q psy15447 250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE--HALG-SVGGFCVG-SSYIIEHHRLS---GSG--------- 313 (457)
Q Consensus 250 li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s--K~lg-~~gG~v~~-~~~~~~~~~~~---~~~--------- 313 (457)
+|+|++|++|.. -.+. ..|.. ...|+.+.|++ |.++ +.||+++. ++++.+.++.. +..
T Consensus 151 lI~D~a~a~g~~-~~~~----~~g~~-~~~d~~~~S~~~~K~~~~~~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 224 (380)
T TIGR03588 151 IIEDASHALGAE-YGGK----PVGNC-RYADATVFSFHPVKIITTAEGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQ 224 (380)
T ss_pred EEEECCCcccCc-cCCE----eCCCc-cccceEEEecCCCCcccccCceEEEECCHHHHHHHHHHHHCCCCCCccccccc
Confidence 999999998743 1111 11210 12378888987 8885 45776665 46666655421 100
Q ss_pred ----c-------eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-C----CCeEE
Q psy15447 314 ----Y-------CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR-D----TPLKY 377 (457)
Q Consensus 314 ----~-------~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~-~----~~~~~ 377 (457)
+ .+...++.+.++.+++.|+.+ ++..++-+++.+++.+.|+. ++++.+..+. . .....
T Consensus 225 ~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l---~~~~~~r~~~~~~~~~~L~~---~~~~~~~~~~~~~~~~~~~~~ 298 (380)
T TIGR03588 225 DEGPWYYEQQELGFNYRMTDIQAALGLSQLKKL---DRFVAKRREIAARYDRLLKD---LPYFTPLTIPLGSKSAWHLYP 298 (380)
T ss_pred ccCcceeeeeccccccCccHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhcC---CCCccCCCCCCCCEeEEEEEE
Confidence 0 112235777777777766655 34678888899999999988 4444432221 1 12333
Q ss_pred EEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc-------CC---------CCCeEEEEecCCCCHHHHHHHH
Q psy15447 378 LYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA-------KK---------QKPSIRITCNISHTEQDMNSLI 441 (457)
Q Consensus 378 i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~-------~~---------~~~~lRi~~~~~~t~edi~~~~ 441 (457)
+.+..... ....++.+.|.++||.++....|.... .. ....+++.++...|++|+++++
T Consensus 299 i~~~~~~~-----~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~ 373 (380)
T TIGR03588 299 ILLDQEFG-----CTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVV 373 (380)
T ss_pred EEECCcCC-----CCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHH
Confidence 44432100 035678999999999887543332100 00 0256899899999999999999
Q ss_pred HHHHHHH
Q psy15447 442 ETLCKSH 448 (457)
Q Consensus 442 ~~l~~~~ 448 (457)
++|++++
T Consensus 374 ~~l~~~~ 380 (380)
T TIGR03588 374 ETLRKVL 380 (380)
T ss_pred HHHHHhC
Confidence 9998763
No 284
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.90 E-value=2e-20 Score=184.32 Aligned_cols=312 Identities=11% Similarity=0.088 Sum_probs=212.1
Q ss_pred hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccH
Q psy15447 97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINF 175 (457)
Q Consensus 97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~ 175 (457)
++-.+++.+.+.. +. .+|..+...++++++++++|.+.+++++||++|+..++.++ .++||.|+++.++|.
T Consensus 11 ~~~~~~~~~~l~~-~~-------~~g~~~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~ 82 (375)
T PRK11706 11 GTELDYIQQAMSS-GK-------LCGDGGFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFV 82 (375)
T ss_pred HHHHHHHHHHHHc-CC-------ccCCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcH
Confidence 3446667766654 21 23456778999999999999999999999999998877655 689999999999999
Q ss_pred HHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcE
Q psy15447 176 AIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR 249 (457)
Q Consensus 176 ~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~ 249 (457)
++...+...|.+++.++. .|++++++.+.+ ++++|++. +++|...++++|.++|++||++
T Consensus 83 ~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-----------~tk~i~~~---~~~G~~~~~~~i~~la~~~~i~ 148 (375)
T PRK11706 83 STANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-----------KTRAIVPV---HYAGVACEMDTIMALAKKHNLF 148 (375)
T ss_pred HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-----------CCeEEEEe---CCCCCccCHHHHHHHHHHcCCE
Confidence 999999999999888763 368888887743 34555543 3579899999999999999999
Q ss_pred EEEEcCcccccccCCCCccccccCCCCCCccEEEecCc--ccccC--cccEEEecHHHHHHHHhh---CCc---------
Q psy15447 250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE--HALGS--VGGFCVGSSYIIEHHRLS---GSG--------- 313 (457)
Q Consensus 250 li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s--K~lg~--~gG~v~~~~~~~~~~~~~---~~~--------- 313 (457)
+|+|++|++|... .|+... .+ .|+.+.||+ |.++. +|++++.++++.+.++.. +..
T Consensus 149 vIeD~a~a~g~~~-~~~~~g-~~------~~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 220 (375)
T PRK11706 149 VVEDAAQGVMSTY-KGRALG-TI------GHIGCFSFHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQV 220 (375)
T ss_pred EEEECcccccccc-CCeeee-cC------cCEEEEeCCCCccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCC
Confidence 9999999987531 122111 11 155555665 99953 344566667777654321 100
Q ss_pred -------ceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec-cC----CCCeEEEEec
Q psy15447 314 -------YCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG-HR----DTPLKYLYLQ 381 (457)
Q Consensus 314 -------~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~-~~----~~~~~~i~~~ 381 (457)
..++..++.+.++.+++.++.+++ ..++-+++.+++.+.|+.+....++.+.. +. ..+++++.+.
T Consensus 221 ~~~~~~~~g~~~~~~~~~aa~~~~ql~~l~~---~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (375)
T PRK11706 221 DKYTWVDIGSSYLPSELQAAYLWAQLEAADR---INQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLR 297 (375)
T ss_pred CcceeeecccccCcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEEC
Confidence 012222467777777787777654 55667777888888887621101233221 11 1335666665
Q ss_pred CCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc------cc--C-C--------CCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447 382 KSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ------EA--K-K--------QKPSIRITCNISHTEQDMNSLIETL 444 (457)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~------~~--~-~--------~~~~lRi~~~~~~t~edi~~~~~~l 444 (457)
... ...++.+.|.++||.++....|.. .. . . ....+.+.++...|++|+++++++|
T Consensus 298 ~~~-------~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i 370 (375)
T PRK11706 298 DLE-------DRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTI 370 (375)
T ss_pred CcC-------CHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHH
Confidence 433 456899999999998764322211 00 0 0 1345777778889999999999999
Q ss_pred HHHH
Q psy15447 445 CKSH 448 (457)
Q Consensus 445 ~~~~ 448 (457)
++++
T Consensus 371 ~~~~ 374 (375)
T PRK11706 371 LEFF 374 (375)
T ss_pred HHHh
Confidence 8864
No 285
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=3.2e-21 Score=191.52 Aligned_cols=293 Identities=18% Similarity=0.212 Sum_probs=198.7
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHH----hcCCeEEEecCCCHHHH
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLI----ASRCKVQYFKHNNMQHL 199 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~----~~g~~~~~~~~~d~~~l 199 (457)
++...+|+++||++.|.+.+++++||++|+..++.+++++||.|++..+.|+.+...+. ..|.++.+++.+|++++
T Consensus 57 ~pt~~~Le~~lA~l~g~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~l 136 (425)
T PRK06084 57 NPTNDVLEQRVAALEGGVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAAL 136 (425)
T ss_pred CchHHHHHHHHHHHhCCCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHH
Confidence 45678999999999999999999999999999999999999999998887765554432 24667777888899999
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV 279 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~ 279 (457)
++.+++ ++++|++|+++||+|.+.++++|.++|++||+++|+|++++.+.... . + ..++
T Consensus 137 e~ai~~-----------~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~~---p------~-~~ga 195 (425)
T PRK06084 137 EALIDE-----------RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLCR---P------F-EHGA 195 (425)
T ss_pred HHHhcc-----------CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCC---h------h-hcCC
Confidence 998853 45788899999999999999999999999999999999998654321 1 1 1245
Q ss_pred cEEEecCcccccCc----ccEEEecHHH--HHH----------------------------H-H-hhCCcceecCCCcHH
Q psy15447 280 DMIIGSLEHALGSV----GGFCVGSSYI--IEH----------------------------H-R-LSGSGYCFSASLPPF 323 (457)
Q Consensus 280 Di~~~s~sK~lg~~----gG~v~~~~~~--~~~----------------------------~-~-~~~~~~~~~~~~~~~ 323 (457)
|+++.|++|.+|+. ||+++.+... .+. . . .......++..++|.
T Consensus 196 Divv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~ 275 (425)
T PRK06084 196 DIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPF 275 (425)
T ss_pred CEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHH
Confidence 89999999999753 5777654321 000 0 0 000011345568999
Q ss_pred HHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec--------------cC-CCCeEEEEecCCcchHH
Q psy15447 324 LAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG--------------HR-DTPLKYLYLQKSDDEVA 388 (457)
Q Consensus 324 ~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~--------------~~-~~~~~~i~~~~~~~~~~ 388 (457)
.|+.++..|+.+. .++++..+++..+.+.|++++.+..+..++ .. .+.++.+.++++.
T Consensus 276 ~a~l~lrgl~tl~---~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~~~---- 348 (425)
T PRK06084 276 NAFLILQGLETLA---LRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIKGGQ---- 348 (425)
T ss_pred HHHHHHcCcCcHH---HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEecCCH----
Confidence 8888877776554 478888999999999999854332222211 01 2557788876442
Q ss_pred HHHHHHHHHHHHHHcCeeEecc------ccCcc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 389 SKKLLQTICDMCIQAGFAITCP------SHLDQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 389 ~~~~~~~~~~~l~~~Gi~v~~~------~~~~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
....++.+.|.=-.+.++.+ .+|.. .....++.+||++.+. |.+.+++-|+++++.
T Consensus 349 --~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svGlE----d~~dLi~dl~~Al~~ 422 (425)
T PRK06084 349 --AAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIGIE----HIDDIIADLAQALDA 422 (425)
T ss_pred --HHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHHh
Confidence 13445666654111111111 11111 0112257899999864 455555555555544
No 286
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=9.6e-21 Score=186.10 Aligned_cols=292 Identities=14% Similarity=0.129 Sum_probs=199.4
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~ 198 (457)
..+...+|+++||++.|.+.+++++||++|+..++.+++++||.|++..+.|+.....+ ...+.++..++..|+++
T Consensus 50 ~~pt~~~L~~~lA~l~g~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~ 129 (386)
T PRK08045 50 GNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQA 129 (386)
T ss_pred CCccHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHH
Confidence 35667899999999999888999999999999999999999999999999887644322 22344666677678888
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.+++ ++++|++++++||+|.+.|+++|.++|+++|+++|+||+|..+.... . .. ..
T Consensus 130 l~~~l~~-----------~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~~---p----l~---~g 188 (386)
T PRK08045 130 LRAALAE-----------KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQN---P----LA---LG 188 (386)
T ss_pred HHHhccc-----------CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCC---c----hh---hC
Confidence 8887743 45789999999999999999999999999999999999987553211 1 11 24
Q ss_pred ccEEEecCcccccC----cccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGS----VGGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 279 ~Di~~~s~sK~lg~----~gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~ 353 (457)
+|+++.|++|.+++ .+|++++ ++++++.++... ...+..++|+.+..++..|+.+. .++++..+++..+.
T Consensus 189 aDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~--~~~g~~~~p~~~~l~~rgl~tl~---~R~~~~~~na~~la 263 (386)
T PRK08045 189 ADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWA--NNIGVTGGAFDSYLLLRGLRTLV---PRMELAQRNAQAIV 263 (386)
T ss_pred CCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHH--HhcCCCCCHHHHHHHHhhhccHH---HHHHHHHHHHHHHH
Confidence 58999999999963 2466655 577776665322 23344578888888888876553 37788999999999
Q ss_pred HHhhcccccCCeEEecc--------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccc------cC
Q psy15447 354 SLLSQHKVTQRFLVQGH--------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPS------HL 413 (457)
Q Consensus 354 ~~L~~~~~~~~~~~~~~--------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~ 413 (457)
+.|++++.+..+..++- ..+.++.+.++++. ....++.+.|.=-.+.++.+. +|
T Consensus 264 ~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~------~~~~~f~~~l~~~~~~~s~G~~~sl~~~~ 337 (386)
T PRK08045 264 KYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDE------QTLRRFLGGLSLFTLAESLGGVESLISHA 337 (386)
T ss_pred HHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcH------HHHHHHHHhccceeEeccCCCCceeEeCC
Confidence 99998443222222111 12567888886432 134566666542121111111 11
Q ss_pred cc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 414 DQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 414 ~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
.. .....++.+|+++.+...++-++.+.++|++
T Consensus 338 ~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 382 (386)
T PRK08045 338 ATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRA 382 (386)
T ss_pred CCcccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHH
Confidence 11 0112257899999875544444444444443
No 287
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=4.7e-21 Score=189.04 Aligned_cols=288 Identities=15% Similarity=0.184 Sum_probs=200.1
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~ 198 (457)
..+...+|++++|++.|.+.+++++||+.|+..++. +.++||.|++..+.|+++.. .+...|.++..++..|+++
T Consensus 52 ~~p~~~~le~~lA~l~g~~~~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~ 130 (390)
T PRK08064 52 GNPTREALEDIIAELEGGTKGFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLEE 130 (390)
T ss_pred CChhHHHHHHHHHHHhCCCCeEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCHHH
Confidence 356778999999999999889999999999988886 77899999999888875442 3455788999998888888
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.+. +++++|+++++.||+|.+.|+++|.++|+++|+++|+|++|+.+.... .+. .+
T Consensus 131 l~~~l~-----------~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~---------~~~-~g 189 (390)
T PRK08064 131 VAQNIK-----------PNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQK---------PLD-LG 189 (390)
T ss_pred HHHhcC-----------CCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccC---------chh-hC
Confidence 887774 346899999999999999999999999999999999999987543211 111 24
Q ss_pred ccEEEecCcccccCc----ccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGSV----GGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 279 ~Di~~~s~sK~lg~~----gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~ 353 (457)
+|+++.|++|.+++. +|+++. ++++++.++.... .++...+|..++..+..++.+ +.++++..++...+.
T Consensus 190 ~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~--~~g~~~~~~~a~l~~~gl~tl---~~R~~~~~~~a~~la 264 (390)
T PRK08064 190 ADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQN--SFGAVLGVQDCWLVLRGLKTL---HVRLEHSSETANKIA 264 (390)
T ss_pred CcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHH--hcCCCCCHHHHHHHHcccCcH---HHHHHHHHHHHHHHH
Confidence 589999999999632 476555 4677777764432 244455777666655444333 347788888888898
Q ss_pred HHhhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCe---eEeccc-----
Q psy15447 354 SLLSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGF---AITCPS----- 411 (457)
Q Consensus 354 ~~L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi---~v~~~~----- 411 (457)
+.|++++.+..+...+ ...+.++.+.+++.. ...++.+. .++ .++.+.
T Consensus 265 ~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~-------~~~~f~~~---l~l~~~~~s~G~~~sl~ 334 (390)
T PRK08064 265 LYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSEE-------AVRQFVSH---VKLPVFAVSLGAVESIL 334 (390)
T ss_pred HHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECCHH-------HHHHHHHh---CCcceEcccCCCCccee
Confidence 8888754322111111 123567888875321 33334333 344 222221
Q ss_pred -cC------cc------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 412 -HL------DQ------EAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 412 -~~------~~------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
+| .. .....++.+|+++.+..+++.++.+.++|+++
T Consensus 335 ~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 335 SYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred ECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 11 00 00122578999999988888888888888763
No 288
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=6.9e-21 Score=188.97 Aligned_cols=294 Identities=14% Similarity=0.147 Sum_probs=197.0
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEec-CCCHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFK-HNNMQ 197 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~-~~d~~ 197 (457)
.++...+|+++++++.|.+.+++++||+.|+..++.+++++||.|++....|+.+... +...|.++..++ ..|++
T Consensus 67 ~~p~~~~Le~~lA~l~g~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e 146 (436)
T PRK07812 67 MNPTQDVVEQRIAALEGGVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLD 146 (436)
T ss_pred CCchHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHH
Confidence 3567889999999999999999999999999999999999999999998888776543 233567777774 45677
Q ss_pred HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCC
Q psy15447 198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTE 277 (457)
Q Consensus 198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~ 277 (457)
++++.++ +++++|++|++.||+|.+.|+++|.++|++||+++|+|++++.+.... .+ ..
T Consensus 147 ~l~~ai~-----------~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~---------pl-~~ 205 (436)
T PRK07812 147 AWRAAVR-----------PNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLIR---------PL-EH 205 (436)
T ss_pred HHHHhCC-----------CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCC---------ch-hc
Confidence 7777664 356899999999999999999999999999999999999987653321 11 13
Q ss_pred CccEEEecCcccccCcc----cEEEecHH------------------------------HHHHHHhhCCcceecCCCcHH
Q psy15447 278 EVDMIIGSLEHALGSVG----GFCVGSSY------------------------------IIEHHRLSGSGYCFSASLPPF 323 (457)
Q Consensus 278 ~~Di~~~s~sK~lg~~g----G~v~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~ 323 (457)
++|+++.|++|.+|+.| |.++.+.. ++...+... ....+..++|.
T Consensus 206 GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~l~p~ 284 (436)
T PRK07812 206 GADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQL-LRDLGSAISPF 284 (436)
T ss_pred CCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHH-HHhcCCCCCHH
Confidence 56899999999997654 44554321 000111000 11234567888
Q ss_pred HHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec---------------cCCCCeEEEEecCCcchHH
Q psy15447 324 LAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG---------------HRDTPLKYLYLQKSDDEVA 388 (457)
Q Consensus 324 ~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~---------------~~~~~~~~i~~~~~~~~~~ 388 (457)
.|+..+..|+-+. .++++..+++..+.+.|++++.+..+..++ ...+.++.+.++++.
T Consensus 285 ~a~l~~rgl~tL~---~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~---- 357 (436)
T PRK07812 285 NAFLIAQGLETLS---LRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAGGV---- 357 (436)
T ss_pred HHHHHhcCcCcHH---HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCH----
Confidence 8887777765553 478889999999999999854333232211 112567888876432
Q ss_pred HHHHHHHHHHHHHHcCeeEecc------ccCcc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 389 SKKLLQTICDMCIQAGFAITCP------SHLDQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 389 ~~~~~~~~~~~l~~~Gi~v~~~------~~~~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
..+.++.+.|.=-.+....+ .+|.. .....++.+||++.+.. .+.+++-|+++++.
T Consensus 358 --~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvGlEd----~~dli~dl~~Al~~ 431 (436)
T PRK07812 358 --EAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVGIEG----IDDILADLEAGFAA 431 (436)
T ss_pred --HHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEeccCC----HHHHHHHHHHHHHh
Confidence 13556666654212211111 11111 01123568999998743 44445555555544
Q ss_pred h
Q psy15447 451 A 451 (457)
Q Consensus 451 ~ 451 (457)
+
T Consensus 432 ~ 432 (436)
T PRK07812 432 A 432 (436)
T ss_pred h
Confidence 3
No 289
>PRK05939 hypothetical protein; Provisional
Probab=99.89 E-value=6.7e-21 Score=187.75 Aligned_cols=247 Identities=16% Similarity=0.155 Sum_probs=178.6
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHH---HHHHHHhcCCeEEEecCCCHHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFA---IQTGLIASRCKVQYFKHNNMQHL 199 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~---~~~~~~~~g~~~~~~~~~d~~~l 199 (457)
.++...+||++++++.|.+.++.++||+.|+..++.+++++||.|++....|++ .+..+...|.++..++..|++++
T Consensus 45 g~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~d~e~l 124 (397)
T PRK05939 45 GTPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDATDVQNV 124 (397)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCCCHHHH
Confidence 357789999999999999999999999999999999999999999999887754 33456667899999998899999
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV 279 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~ 279 (457)
++.+. +++++|++++++|++|.+.|+++|.++|++||+++|+|++++.+.. ++....++
T Consensus 125 ~~~l~-----------~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~----------~~~~~~ga 183 (397)
T PRK05939 125 AAAIR-----------PNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWL----------FRPKDVGA 183 (397)
T ss_pred HHhCC-----------CCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccc----------cCccccCC
Confidence 98874 3567999999999999999999999999999999999999864321 11111356
Q ss_pred cEEEecCcccccCcc----cEEEecHH--------H-------------HHHHHhhCCcceecCCCcHHHHHHHHHHHHH
Q psy15447 280 DMIIGSLEHALGSVG----GFCVGSSY--------I-------------IEHHRLSGSGYCFSASLPPFLAVAANKALHL 334 (457)
Q Consensus 280 Di~~~s~sK~lg~~g----G~v~~~~~--------~-------------~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~ 334 (457)
|+++.|++|.+++.| |+++.+.. + +..++... ...++..++|..+...+..++-
T Consensus 184 Divv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~~~p~~a~l~~rgl~t 262 (397)
T PRK05939 184 SLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKG-LRDMGATLSSEAAHRIAIGAET 262 (397)
T ss_pred EEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHH-HHhcCCCCCHHHHHHHHcCcCc
Confidence 999999999997544 44442221 1 11111111 1134556788888777766655
Q ss_pred HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHH
Q psy15447 335 LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMC 400 (457)
Q Consensus 335 ~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 400 (457)
+. .++++..+++..+.+.|++++.+..+..++ ...+.++.+.+++.. ...++.+.|
T Consensus 263 l~---~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~~-------~~~~f~~~l 332 (397)
T PRK05939 263 LA---LRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADGI-------DCFDFLNRL 332 (397)
T ss_pred HH---HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCHH-------HHHHHHHhC
Confidence 53 367888889999999998855433332222 122567778776432 344566555
Q ss_pred H
Q psy15447 401 I 401 (457)
Q Consensus 401 ~ 401 (457)
.
T Consensus 333 ~ 333 (397)
T PRK05939 333 K 333 (397)
T ss_pred C
Confidence 3
No 290
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.89 E-value=8.5e-21 Score=185.29 Aligned_cols=295 Identities=13% Similarity=0.109 Sum_probs=203.8
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~ 198 (457)
.++....|++.++.+.+.+.+++++||++|+..++.++.++||.|++..+.|+++.. .+...|.++..++..+.+.
T Consensus 62 gnPt~~~Le~~la~le~~~~~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~ 141 (395)
T PRK05967 62 GTPTTDALCKAIDALEGSAGTILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAG 141 (395)
T ss_pred CChHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHH
Confidence 467889999999999988889999999999999999999999999999998887653 3466788888887777777
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.++ +++++|++|++.||++.+.|+++|+++|+++|+++|+|++++.+.+-+ .+ ..+
T Consensus 142 l~~al~-----------~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~---------pl-~~G 200 (395)
T PRK05967 142 IAKLMR-----------PNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYFR---------PL-DFG 200 (395)
T ss_pred HHHhcC-----------cCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceecC---------hh-HcC
Confidence 887774 356899999999999999999999999999999999999987543211 11 135
Q ss_pred ccEEEecCcccccC----cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS 354 (457)
Q Consensus 279 ~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~ 354 (457)
+||++.|++|.+++ .+|+++++++..+.+.... ...+..++|..|...+..++-+. .++++..+++..+.+
T Consensus 201 aDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~--~~~G~~~~p~da~l~~rgl~Tl~---lR~~~~~~na~~lA~ 275 (395)
T PRK05967 201 VDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAH--GTLGLCAGPDDTYQILRGLRTMG---IRLEHHRKSALEIAR 275 (395)
T ss_pred CCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHH--HHcCCCCCHHHHHHHHcCcccHH---HHHHHHHHHHHHHHH
Confidence 68999999999964 2477777877666554221 23456689998888877766553 377888899999999
Q ss_pred HhhcccccCCeEEecc--------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc------Cc
Q psy15447 355 LLSQHKVTQRFLVQGH--------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH------LD 414 (457)
Q Consensus 355 ~L~~~~~~~~~~~~~~--------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------~~ 414 (457)
.|++++.+..+..++- ..+.++.+.++.+... ....+.++.+.|.=-.+.++.+.. +.
T Consensus 276 ~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~--~~~~~~~f~~~l~l~~~~~slG~~~sLi~~~~ 353 (395)
T PRK05967 276 WLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEK--GKAKAHAFLDALEIFGLGYSWGGYESLALHVK 353 (395)
T ss_pred HHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcc--cHHHHHHHHHhCCcceEccCCCCcceeeeeCC
Confidence 9988544333322210 1256788888633000 001445666665421111111111 00
Q ss_pred c------ccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447 415 Q------EAKKQKPSIRITCNISHTEQDMNSLIETLC 445 (457)
Q Consensus 415 ~------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 445 (457)
. .....++.+||++.+...++=++.+.++|+
T Consensus 354 ~~~~~~~~~~~~~~liRlSvGlEd~~dLi~Dl~~Al~ 390 (395)
T PRK05967 354 LGDRTVAKAPYAGPVIRLQIGLEDVPDLKADLERGFA 390 (395)
T ss_pred CChhHhhhccCCCCeEEEEeccCCHHHHHHHHHHHHH
Confidence 0 001224689999987554444444444443
No 291
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.89 E-value=1.1e-20 Score=185.68 Aligned_cols=291 Identities=14% Similarity=0.155 Sum_probs=199.7
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~ 198 (457)
..+...+|++.++++.|.+.+++++||++|+..++.+++++||.|++..+.|+.+...+ ...+.++..++..|+++
T Consensus 49 ~~p~~~~le~~lA~l~g~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~ 128 (382)
T TIGR02080 49 GNPTRDLLQQALAELEGGAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQA 128 (382)
T ss_pred CCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHH
Confidence 35668899999999999888999999999999999999999999999999988654322 23346666666678888
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.+++ ++++|++++++||+|.+.|+++|.++|+++|+++|+||+|..+.... .+. .+
T Consensus 129 l~~ai~~-----------~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~---------pl~-~g 187 (382)
T TIGR02080 129 LRAALAQ-----------KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQN---------PLA-LG 187 (382)
T ss_pred HHHhcCc-----------CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCC---------chh-hC
Confidence 8887743 45799999999999999999999999999999999999987553211 111 23
Q ss_pred ccEEEecCcccccC----cccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGS----VGGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 279 ~Di~~~s~sK~lg~----~gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~ 353 (457)
+|++++|++|.+++ .+|+++. ++++.+.++... ...+..++|+.++.++..++.+. .++++..+++..+.
T Consensus 188 aDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~--~~~g~~~sp~~a~l~lr~l~tl~---~R~~~~~~na~~~a 262 (382)
T TIGR02080 188 ADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWA--NNLGVTGGAFDSYLTLRGLRTLV---ARMRLQQRNAQAIV 262 (382)
T ss_pred CCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHH--HccCCCCCHHHHHHHHcccchHH---HHHHHHHHHHHHHH
Confidence 48999999999964 3577655 677777665332 23355679999888877776554 35778889999999
Q ss_pred HHhhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccc------cC
Q psy15447 354 SLLSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPS------HL 413 (457)
Q Consensus 354 ~~L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~ 413 (457)
+.|++++.+..+..++ ...+.++.+.++++. ....++.+.|.=-++.++.++ +|
T Consensus 263 ~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~------~~~~~f~~~l~~~~~~~s~G~~~sl~~~p 336 (382)
T TIGR02080 263 EYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGE------QTVRRFLGGLSLFTLAESLGGVESLIAHP 336 (382)
T ss_pred HHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcH------HHHHHHHHcCCcceEeccCCCCcceeECC
Confidence 9998744322222211 012568888886432 133456655542122222111 11
Q ss_pred cc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 414 DQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 414 ~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
.. .....++.+||++.+. |.+.+++-|+++++
T Consensus 337 ~~~~~~~~~~~~~~~~gi~~~liRlsvGlE----~~~dl~~dl~~al~ 380 (382)
T TIGR02080 337 ATMTHAAMGPEARAEAGISDTLLRLSVGLE----DADDLIADLEQGLR 380 (382)
T ss_pred CccCcccCCHHHHHhcCCCcCeEEEEeccC----CHHHHHHHHHHHHh
Confidence 11 0111256899999864 45555555555554
No 292
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.89 E-value=3.8e-20 Score=182.39 Aligned_cols=312 Identities=13% Similarity=0.094 Sum_probs=209.1
Q ss_pred hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccH
Q psy15447 97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINF 175 (457)
Q Consensus 97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~ 175 (457)
++-.+++.+.+.. +... ..+...+||+++++++|.+.+++++||++|+..++.++ .++||.|++..+.|.
T Consensus 14 ~~e~~~~~~~l~~-~~~~--------~g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~ 84 (379)
T PRK11658 14 DEELAAVKEVLRS-GWIT--------TGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWV 84 (379)
T ss_pred HHHHHHHHHHHHc-CCcc--------CCHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHH
Confidence 4556777777754 2111 23457899999999999999999999999999999998 799999999999999
Q ss_pred HHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcE
Q psy15447 176 AIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR 249 (457)
Q Consensus 176 ~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~ 249 (457)
++...+...|.+++.++. .|++++++.+.+ ++++|+.. +++|...++++|.++|++||++
T Consensus 85 ~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-----------~tkav~~~---~~~G~~~d~~~i~~~a~~~gi~ 150 (379)
T PRK11658 85 STLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-----------RTKAIIPV---HYAGAPADLDAIRAIGERYGIP 150 (379)
T ss_pred HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-----------CCeEEEEe---CCCCCcCCHHHHHHHHHHcCCe
Confidence 998888889999887763 267888887743 34566532 3579999999999999999999
Q ss_pred EEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-CcccEEEec-HHHHHHHHhhC-Ccc------------
Q psy15447 250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVGS-SYIIEHHRLSG-SGY------------ 314 (457)
Q Consensus 250 li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~-~~~~~~~~~~~-~~~------------ 314 (457)
+|+|++|++|..- .|... + ....++...+-+|.+. +.||+++++ +++.+.++... ++.
T Consensus 151 vi~D~a~a~g~~~-~~~~~----g--~~g~~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~ 223 (379)
T PRK11658 151 VIEDAAHAVGTYY-KGRHI----G--ARGTAIFSFHAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGR 223 (379)
T ss_pred EEEECCCccCCeE-CCeec----C--CCCCEEEeCCCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccC
Confidence 9999999977532 12111 1 1122444334457773 467877764 67766654311 010
Q ss_pred ---------eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC-----CCeEEEEe
Q psy15447 315 ---------CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD-----TPLKYLYL 380 (457)
Q Consensus 315 ---------~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~-----~~~~~i~~ 380 (457)
.+...++.+.+|.++..++.++ +..++-+++.+++.+.|++ ++...+..+.. ..++.+.+
T Consensus 224 ~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~---~~~~~r~~~a~~~~~~L~~---~~~~~~~~~~~~~~~~~~~~~~~~ 297 (379)
T PRK11658 224 APQAEVLTPGYKYNLADINAAIALVQLAKLE---ALNARRREIAARYLQALAD---LPFQPLSLPAWPHQHAWHLFIIRV 297 (379)
T ss_pred CCcceeeccccccCcCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcC---CCCccCcCCCCCCceeEEEEEEEE
Confidence 0112356677777777766554 3667788888889899887 22222211111 12344444
Q ss_pred cCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc------------CC----CCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447 381 QKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA------------KK----QKPSIRITCNISHTEQDMNSLIETL 444 (457)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~------------~~----~~~~lRi~~~~~~t~edi~~~~~~l 444 (457)
..... .....++.+.|.++||.++....|.... +. ....+.+..+...|++|+++++++|
T Consensus 298 ~~~~~----~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i 373 (379)
T PRK11658 298 DEERC----GISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITAL 373 (379)
T ss_pred CCccc----cCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHH
Confidence 32100 0034579999999998866432222100 00 1345777778889999999999999
Q ss_pred HHHH
Q psy15447 445 CKSH 448 (457)
Q Consensus 445 ~~~~ 448 (457)
+++.
T Consensus 374 ~~~~ 377 (379)
T PRK11658 374 QQIA 377 (379)
T ss_pred HHHH
Confidence 9875
No 293
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.1e-20 Score=189.95 Aligned_cols=339 Identities=13% Similarity=0.040 Sum_probs=204.4
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHh-hc-C---C--C-cEEEecccHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIAS-FM-G---L--E-ETALYSFGFS 151 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~-~~-g---~--~-~~i~~~sG~~ 151 (457)
+.++|++-+.+ ++..++.+.+ +.+.+. +.. +....|..+..+++.+.+.+ .. + . + ++++++++++
T Consensus 100 ~~~i~l~~g~p-~~~~~~~v~e-~~~~~~--~~~---Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~ 172 (527)
T PRK09275 100 RDAVSYVRDQL-GFDADEFVYE-LVDGII--GDN---YPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTA 172 (527)
T ss_pred HHHHhhcCCCC-CCCCCHHHHH-HHHHHh--cCC---CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHH
Confidence 45667766544 7766666777 445553 222 22334556666666553332 21 2 1 2 4555666678
Q ss_pred HHHHHHHh-----hcCCCCEEEEeCcccHHHHHHHHhcC--CeEEEecC-------CCHHHHHHHHHhhchhcccCCCCc
Q psy15447 152 TSASAIAA-----YVKRNDAVFVDENINFAIQTGLIASR--CKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVT 217 (457)
Q Consensus 152 a~~~ai~a-----~~~~gd~v~~~~~~h~~~~~~~~~~g--~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~ 217 (457)
|+..++.+ ++++||.|++..++|..+...+.+.+ ..++.++. .|++++++++. ++
T Consensus 173 al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~-----------~~ 241 (527)
T PRK09275 173 AMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRD-----------PS 241 (527)
T ss_pred HHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC-----------CC
Confidence 88888775 68999999999999999888877765 44444431 25677776543 35
Q ss_pred cEEEEEecCCCCCCCCCC---hHHHHHHHHH--cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC
Q psy15447 218 KKFIIVEGVYMNSADICP---LKDILSLRSK--YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS 292 (457)
Q Consensus 218 ~~~vi~e~v~~~~G~i~~---l~~i~~l~~~--~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~ 292 (457)
+++|++.+++||+|.+.+ +++|+++|++ +++++|.||+|+.... . ...+.. ..|++ .|++.||||.+|+
T Consensus 242 tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~-~-~~s~~~---~~~~~-~I~v~SfSK~f~m 315 (527)
T PRK09275 242 IKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD-D-FRSLFA---VLPYN-TILVYSFSKYFGA 315 (527)
T ss_pred CCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc-c-ccCHHH---hCCCC-EEEEeehhhhccC
Confidence 677777789999999998 7788889964 5999999999975332 1 111111 12333 4889999999987
Q ss_pred cc---cEEEecHH-----HHHHH--------------------------------HhhCCcceecCCCcHHHHHHHHHH-
Q psy15447 293 VG---GFCVGSSY-----IIEHH--------------------------------RLSGSGYCFSASLPPFLAVAANKA- 331 (457)
Q Consensus 293 ~g---G~v~~~~~-----~~~~~--------------------------------~~~~~~~~~~~~~~~~~~aaa~a~- 331 (457)
+| ||++++++ +++.+ +.... +...+...|...+.++.+
T Consensus 316 tG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~-~~t~~~s~p~Q~a~al~~~ 394 (527)
T PRK09275 316 TGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVAL-NHTAGLSTPQQVQMALFSL 394 (527)
T ss_pred cHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHH-hhccCCCCHHHHHHHHHHH
Confidence 76 99998875 33222 11111 111222234433323211
Q ss_pred HHHHhhC----cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCc----chHHH-----HHHHHHHHH
Q psy15447 332 LHLLKAN----PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD----DEVAS-----KKLLQTICD 398 (457)
Q Consensus 332 l~~~~~~----~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~-----~~~~~~~~~ 398 (457)
...++.. ++.++.++++.+.+.+.|.. ++....+.++..+++.+..-. ..+.. .....+++.
T Consensus 395 ~all~~~~~~~~~~~~~~~~Rr~~l~~~Lg~-----~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~ 469 (527)
T PRK09275 395 FALLDEEDAYKKAMKDIIRRRYKALYEGLGL-----PEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLF 469 (527)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHcCC-----CCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHH
Confidence 1112222 23566777777777666621 222222334455555543210 00000 002456777
Q ss_pred HHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 399 MCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 399 ~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
+|+++ ||.+.|+..+. ...+++|+++.. .+++++.++.+.|++++++...
T Consensus 470 ~Ll~e~gV~v~PG~~Fg----~~~~~vRis~a~-~~~~~~~~~~~rl~~~l~~y~~ 520 (527)
T PRK09275 470 RLAEETGVVLLPGGGFG----GPEWSVRVSLAN-LNEEDYAKIGKAIRKLLDEYYE 520 (527)
T ss_pred HHHhcCCEEEeCchhhC----CCCCeEEEEEec-CCHHHHHHHHHHHHHHHHHHHH
Confidence 87765 99999887542 235689999953 5889999999999999876643
No 294
>PRK08637 hypothetical protein; Provisional
Probab=99.89 E-value=4.6e-20 Score=182.85 Aligned_cols=328 Identities=11% Similarity=0.024 Sum_probs=202.7
Q ss_pred hhhHHHHHHHHHhcC-CCCCCCCCcccChHHHHHHHHHHHhhcC---C---CcEEEecccHHHHHHHHHhhcCCCCEEEE
Q psy15447 97 PDIEKCAIDCIDKNG-VGSCGPRGFYGTNVVHLDLENDIASFMG---L---EETALYSFGFSTSASAIAAYVKRNDAVFV 169 (457)
Q Consensus 97 p~i~~a~~~~l~~~~-~~~~~~~~~~g~~~~~~~l~~~la~~~g---~---~~~i~~~sG~~a~~~ai~a~~~~gd~v~~ 169 (457)
|-+.+++.+.+++.. ....++....|..++...+.+.+.+..+ . +.+++++++++++..++.+++++||.|++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv 98 (388)
T PRK08637 19 PMYLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLL 98 (388)
T ss_pred cchHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEE
Confidence 345555555555421 1111223345555566555555544322 1 23355556668999999999999999999
Q ss_pred eCcccHHHHHHHH-hcCCeEEEecC--C----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHH
Q psy15447 170 DENINFAIQTGLI-ASRCKVQYFKH--N----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDI 239 (457)
Q Consensus 170 ~~~~h~~~~~~~~-~~g~~~~~~~~--~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i 239 (457)
+.++|..+...+. ..|.+++.++. . |++++++.++... .+.++++++.+++||||.+.+ +++|
T Consensus 99 ~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~-------~~~~~~~~~~~P~NPTG~~~s~~~~~~l 171 (388)
T PRK08637 99 PDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAY-------NKGKVIVILNFPNNPTGYTPTEKEATAI 171 (388)
T ss_pred cCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhc-------cCCCEEEEEeCCCCCCCCCCCHHHHHHH
Confidence 9999988877654 57888887654 2 5788888776211 134567888889999999988 5677
Q ss_pred HHHHHH-----cCcEEEEEcCcccccccCCCC-ccc-cccCCCCCCc-cEEEecCcccccCcc---cEEEe------cHH
Q psy15447 240 LSLRSK-----YQARIFVDESVSFGTLGSTGH-GVT-EYFGVSTEEV-DMIIGSLEHALGSVG---GFCVG------SSY 302 (457)
Q Consensus 240 ~~l~~~-----~g~~li~DEa~~~g~~g~~g~-~~~-~~~~~~~~~~-Di~~~s~sK~lg~~g---G~v~~------~~~ 302 (457)
+++|++ |++++|+||+|....+..... .+. ...+.. +++ -+.++|+||.++.+| ||++. +++
T Consensus 172 ~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~-~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~ 250 (388)
T PRK08637 172 VEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLH-SNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQT 250 (388)
T ss_pred HHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhccc-ccceEEEeccccccCCCcccceEEEEEccccCCcHH
Confidence 777765 999999999987544432111 111 111211 222 234569999987655 99874 367
Q ss_pred HHHHHHhhC---CcceecCCCcHHHHHHHHHHHHH---HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeE
Q psy15447 303 IIEHHRLSG---SGYCFSASLPPFLAVAANKALHL---LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLK 376 (457)
Q Consensus 303 ~~~~~~~~~---~~~~~~~~~~~~~~aaa~a~l~~---~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 376 (457)
+++.+.... ..... .+.+.+..+++.+.++. .+...+.+..++++.+.+.+.|+......++.+..+..+.++
T Consensus 251 l~~~~~~~~~~~~~~~~-~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~ 329 (388)
T PRK08637 251 VKEALEKKVKGLIRSNI-SNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFM 329 (388)
T ss_pred HHHHHHHHHHHHhhccc-CCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEE
Confidence 776664321 00111 13356666666555521 111122344566666677777765211124555544556777
Q ss_pred EEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 377 YLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 377 ~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
|+.++. . ...++++.|+ ++||.+... ..+++|++++. .++++++++++.|.++++.+
T Consensus 330 ~~~l~~-~-------~~~~l~~~l~~~~gv~~~~~---------~~~~iRi~~~~-~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 330 CLKLKG-V-------DAEELRVHLLEKYGIGTIAL---------NETDLRIAFSC-VEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred EecCCh-H-------HHHHHHHHHhhhcceEEEec---------cCCceEEEeec-CCHHHHHHHHHHHHHHHHhc
Confidence 877752 2 4567888886 569987632 24689999976 78999999999999888754
No 295
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.89 E-value=5.8e-20 Score=181.90 Aligned_cols=329 Identities=12% Similarity=0.051 Sum_probs=222.2
Q ss_pred CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC----cEEE--ecccHHHHHHHHHhhcC------
Q psy15447 95 ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE----ETAL--YSFGFSTSASAIAAYVK------ 162 (457)
Q Consensus 95 ~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~----~~i~--~~sG~~a~~~ai~a~~~------ 162 (457)
.+|++.+++.+.+.+....+... ....+..++..+.+++++|.+ +..+ +++|++||..++.+...
T Consensus 53 ~~p~~~~~~~~~l~~~~~np~s~---~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~ 129 (431)
T TIGR01788 53 MEPEARKLMDETINKNMIDKDEY---PQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRM 129 (431)
T ss_pred CCHHHHHHHHHHHhcCCCCcccC---ccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHH
Confidence 47888898888887532222111 223477788889999999965 3444 58899999988865431
Q ss_pred --C-----CCEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447 163 --R-----NDAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN 229 (457)
Q Consensus 163 --~-----gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~ 229 (457)
. +..|+++...|.+..++++..|.++..++.+ |+++|++.|.+ .+.+|++..+++.
T Consensus 130 ~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~-----------~t~lV~~t~g~t~ 198 (431)
T TIGR01788 130 EAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYVIDPEQVVEAVDE-----------NTIGVVCILGTTY 198 (431)
T ss_pred HhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCCceeeCHHHHHHHHhh-----------CCeEEEEEeCCCC
Confidence 1 2378999999999999998888777665532 68888888864 3578888899999
Q ss_pred CCCCCChHHHHHHHHHc------CcEEEEEcCcccccc----cCCCCccccccCCCCCCccEEEecCcccc-cCcc-cEE
Q psy15447 230 SADICPLKDILSLRSKY------QARIFVDESVSFGTL----GSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVG-GFC 297 (457)
Q Consensus 230 ~G~i~~l~~i~~l~~~~------g~~li~DEa~~~g~~----g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~g-G~v 297 (457)
+|.+.|+++|.++|++| |+++++|.+|+.+.. ++.. +.....++|.+..|.||.+ |+.| |++
T Consensus 199 tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~------~~~~~~~~DSis~s~HK~~~~P~g~G~l 272 (431)
T TIGR01788 199 TGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLE------WDFRLPRVKSINVSGHKYGLVYPGVGWV 272 (431)
T ss_pred CcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCch------hhcCCCCceEEEECchhccCCCCCcEEE
Confidence 99999999999999999 999999999985442 2211 1112346789999999987 6655 776
Q ss_pred EecHH--HHHHHHhh----C---CcceecCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcccccCCeE
Q psy15447 298 VGSSY--IIEHHRLS----G---SGYCFSASLPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQRFL 366 (457)
Q Consensus 298 ~~~~~--~~~~~~~~----~---~~~~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~ 366 (457)
+.++. +.+.+... . ..++...+-+...+...-..+..+.. ..+..++..++++++.+.|++ .++++
T Consensus 273 ~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~---~~~~e 349 (431)
T TIGR01788 273 IWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAK---LGPFE 349 (431)
T ss_pred EEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHh---CCCEE
Confidence 65543 22322110 0 00111111111111222233333322 245678888999999999988 57788
Q ss_pred Eecc-CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447 367 VQGH-RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLC 445 (457)
Q Consensus 367 ~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 445 (457)
+..+ +..+++.+.+....+. .....++.+.|.++|+.+....-|.. ..+.-.+|+++...++++.++++++.|+
T Consensus 350 l~~~~~~~~iV~Fr~~~~~~~---~~~~~~l~~~L~~~G~~~~~~~~p~~--~~~~~~lR~~~~~~~~~~~~~~~~~~~~ 424 (431)
T TIGR01788 350 IISDGSGIPLVAFKLKDDADP---GYTLYDLSHRLRERGWIVPAYTLPKN--AEDIVVMRIVVREGFSRDLAELLIEDIE 424 (431)
T ss_pred EeeCCCCceEEEEEeCCCCCC---CcCHHHHHHHHHHCCCcccCCCCCCc--cCCeEEEEEEecCCCCHHHHHHHHHHHH
Confidence 8765 5678888887642100 01456789999999987644332211 1223468999988899999999999999
Q ss_pred HHHHHh
Q psy15447 446 KSHDIA 451 (457)
Q Consensus 446 ~~~~~~ 451 (457)
+++..+
T Consensus 425 ~~~~~~ 430 (431)
T TIGR01788 425 AALAYL 430 (431)
T ss_pred HHHHhh
Confidence 988765
No 296
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.89 E-value=1e-20 Score=188.42 Aligned_cols=214 Identities=14% Similarity=0.185 Sum_probs=164.5
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHHH
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQHL 199 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~l 199 (457)
++...+|+++++++.|.+.+++++||++|+..++.+++++||.|++....|++.... +...|.++.+++.+|++++
T Consensus 62 ~p~~~~le~~lA~l~g~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l 141 (427)
T PRK05994 62 NPTNAVLEERVAALEGGTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPASF 141 (427)
T ss_pred CccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHHH
Confidence 456788999999999999999999999999999999999999999998888765433 4567889999988899999
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV 279 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~ 279 (457)
++.+.+ ++++|++|+++||+|.+.|+++|.++|++||+++|+|++++.+.... .+ ..++
T Consensus 142 ~~ai~~-----------~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~~---------pl-~~ga 200 (427)
T PRK05994 142 ERAITP-----------RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLIR---------PI-EHGA 200 (427)
T ss_pred HHhcCc-----------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccCC---------cc-ccCC
Confidence 888742 46799999999999999999999999999999999999987543211 11 1356
Q ss_pred cEEEecCcccccCc----ccEEEecHH-----------------------HHHHHH-------h-hCCcceecCCCcHHH
Q psy15447 280 DMIIGSLEHALGSV----GGFCVGSSY-----------------------IIEHHR-------L-SGSGYCFSASLPPFL 324 (457)
Q Consensus 280 Di~~~s~sK~lg~~----gG~v~~~~~-----------------------~~~~~~-------~-~~~~~~~~~~~~~~~ 324 (457)
|+++.|++|.+|+. ||+++.... +.+.+. . .......+..++|+.
T Consensus 201 Divv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 280 (427)
T PRK05994 201 DIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFN 280 (427)
T ss_pred cEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHH
Confidence 89999999999753 465553211 111100 0 000113455689999
Q ss_pred HHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccc
Q psy15447 325 AVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKV 361 (457)
Q Consensus 325 ~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~ 361 (457)
|+.++..|+.+. .++++.++++.++.+.|++++.
T Consensus 281 A~l~~~~l~tL~---~r~~~~~~~a~~la~~L~~~p~ 314 (427)
T PRK05994 281 AFLILTGIETLP---LRMQRHSDNALAVAEWLKGHPK 314 (427)
T ss_pred HHHHHcCcccHH---HHHHHHHHHHHHHHHHHHhCCC
Confidence 888888776664 3778888999999999988543
No 297
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.89 E-value=9.2e-21 Score=184.77 Aligned_cols=229 Identities=13% Similarity=0.107 Sum_probs=169.5
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcC--CeEEEecCCCHHHHHH
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASR--CKVQYFKHNNMQHLEE 201 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g--~~~~~~~~~d~~~le~ 201 (457)
++...+||+++|++.|.+.++.++||++|+..++. ++++||.|++....|+.....+.... ..+...-..|++++++
T Consensus 53 ~p~~~~le~~lA~leg~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 131 (364)
T PRK07269 53 NPTRAKLEETLAAIESADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYANTEEELIA 131 (364)
T ss_pred CccHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEecCCHHHHHH
Confidence 45678999999999999999999999999998884 67999999998887776554332211 1121111257888888
Q ss_pred HHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccE
Q psy15447 202 LLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDM 281 (457)
Q Consensus 202 ~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di 281 (457)
.++. ++++|++|++.||+|.+.++++|+++|+++|+++|+|++++.+.... .+ ...+|+
T Consensus 132 ~i~~-----------~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~~---------pl-~~gaDi 190 (364)
T PRK07269 132 AIEE-----------DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQR---------PI-ELGADI 190 (364)
T ss_pred hcCc-----------CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCC---------ch-hhCCcE
Confidence 7753 56799999999999999999999999999999999999975433211 11 135689
Q ss_pred EEecCcccccC----cccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHh
Q psy15447 282 IIGSLEHALGS----VGGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLL 356 (457)
Q Consensus 282 ~~~s~sK~lg~----~gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L 356 (457)
++.|++|.+++ .||++++ ++++.+.++... ...+..++|+.++.++..|+.+. .++++.++++..+.+.|
T Consensus 191 vv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~--~~~G~~~s~~~a~l~~~~L~tL~---~r~~~~~~na~~~a~~L 265 (364)
T PRK07269 191 VLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNL--NTTGAVLSPFDSYLLMRGLKTLS---LRMERSTANAQEVVAFL 265 (364)
T ss_pred EEecCceeccCCCcccceEEEeCcHHHHHHHHHHH--HHhCCCCCHHHHHHHHcCCCcHH---HHHHHHHHHHHHHHHHH
Confidence 99999999974 3688776 566766665321 12345579999998888876654 47788899999999999
Q ss_pred hcccccCCeE-EeccCCCCeEEEEecC
Q psy15447 357 SQHKVTQRFL-VQGHRDTPLKYLYLQK 382 (457)
Q Consensus 357 ~~~~~~~~~~-~~~~~~~~~~~i~~~~ 382 (457)
++ .+++. +..++.+.++.+.+.+
T Consensus 266 ~~---~p~v~~v~ypg~gg~~sf~~~~ 289 (364)
T PRK07269 266 KK---SPAVKEVLYTGKGGMISFKVAD 289 (364)
T ss_pred Hh---CCCccEEeCCCcCcEEEEEECC
Confidence 88 34443 3325567788888763
No 298
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.89 E-value=2.5e-20 Score=188.36 Aligned_cols=290 Identities=16% Similarity=0.155 Sum_probs=189.3
Q ss_pred cccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhc-CCCCEEEEeCcccHHHHHHHHh----cCCeEEEec
Q psy15447 120 FYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYV-KRNDAVFVDENINFAIQTGLIA----SRCKVQYFK 192 (457)
Q Consensus 120 ~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~-~~gd~v~~~~~~h~~~~~~~~~----~g~~~~~~~ 192 (457)
..|..+...++.+.+++++|.+ .++++++|++++..++.++. .+||.|++.++.|+++...+.. .|.+++.++
T Consensus 107 ~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~ 186 (447)
T PRK00451 107 SQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVP 186 (447)
T ss_pred chHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEec
Confidence 4455566666778889999975 34567777778777777764 7899999999999988776654 578888877
Q ss_pred CC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEE--EcCcccccccCCCC
Q psy15447 193 HN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFV--DESVSFGTLGSTGH 266 (457)
Q Consensus 193 ~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~--DEa~~~g~~g~~g~ 266 (457)
.+ |++++++.+. +++++|+++++ |++|.+.|+++|.++|+++|+++++ |.+ +.|.+..
T Consensus 187 ~~~~~~d~~~l~~~i~-----------~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~~--- 250 (447)
T PRK00451 187 YEDGVTDLEALEAAVD-----------DDTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLLKP--- 250 (447)
T ss_pred CCCCCCCHHHHHHhcC-----------CCeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccCCC---
Confidence 64 6778877774 24577777777 7899999999999999999999998 433 3332211
Q ss_pred ccccccCCCCCCccEEEec---Ccccc--c-CcccEEEecHHHHHHHHhh----------CC-------------cceec
Q psy15447 267 GVTEYFGVSTEEVDMIIGS---LEHAL--G-SVGGFCVGSSYIIEHHRLS----------GS-------------GYCFS 317 (457)
Q Consensus 267 ~~~~~~~~~~~~~Di~~~s---~sK~l--g-~~gG~v~~~~~~~~~~~~~----------~~-------------~~~~~ 317 (457)
.+ ..++|++++| ++|.+ | ...|+++.++++++.+... .. .+...
T Consensus 251 -----~~--~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (447)
T PRK00451 251 -----PG--EYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKA 323 (447)
T ss_pred -----cc--cCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccc
Confidence 11 1355888884 44443 3 3348888888887764110 00 00000
Q ss_pred C-C--C-cHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCe--EEEEecCCcchHHH
Q psy15447 318 A-S--L-PPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPL--KYLYLQKSDDEVAS 389 (457)
Q Consensus 318 ~-~--~-~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~ 389 (457)
+ + . .++...++..+++.+.+ .++..+++.++++++.+.|++ ++++++. . ...+ +.+.++ .
T Consensus 324 ~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~---~~g~~~~-~-~~~~~~~~v~~~--~----- 391 (447)
T PRK00451 324 TSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAE---IGGVELF-D-GPFFNEFVVRLP--K----- 391 (447)
T ss_pred cccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhh---cCCEEec-C-CCeEEEEEEecC--C-----
Confidence 0 1 1 11221222223443322 245678889999999999988 4677764 2 2212 223332 1
Q ss_pred HHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 390 KKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 390 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
...+++++|.++||.+.....+.. +...+.+|++++..+|++|+++++++|++++
T Consensus 392 --~~~~~~~~L~~~gi~~~~~~~~~~--~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 392 --PAEEVNEALLEKGILGGYDLGRYY--PELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred --CHHHHHHHHHhcCCCCCccccccc--CCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 235799999999887432111110 1224689999998899999999999998764
No 299
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=2.1e-20 Score=184.41 Aligned_cols=295 Identities=15% Similarity=0.182 Sum_probs=202.7
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCC-CHHH
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHN-NMQH 198 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~-d~~~ 198 (457)
++...+||+.++++.|.+.++.++||+.|+..++.++.++||.|++....|+++... +...|.++.+++.+ |+++
T Consensus 60 nPtv~~lE~~la~leg~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~ 139 (432)
T PRK06702 60 NPTLAAFEQKLAELEGGVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADE 139 (432)
T ss_pred CcHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHH
Confidence 567899999999999999999999999999999999999999999999999877665 56679999988875 8999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++++++ ++++|++|++.||++.+.++++|+++|++||+++|+|++++...+ +. .+ ..+
T Consensus 140 l~~~I~~-----------~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~-------~~--pl-~~G 198 (432)
T PRK06702 140 IVALAND-----------KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYL-------CQ--AF-EHG 198 (432)
T ss_pred HHHhCCc-----------CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchhh-------CC--hh-hcC
Confidence 9998853 567888999999999999999999999999999999999753211 11 11 135
Q ss_pred ccEEEecCcccccC----cccEEEecH----------HHH---------------------HHHHhhCCcceecCCCcHH
Q psy15447 279 VDMIIGSLEHALGS----VGGFCVGSS----------YII---------------------EHHRLSGSGYCFSASLPPF 323 (457)
Q Consensus 279 ~Di~~~s~sK~lg~----~gG~v~~~~----------~~~---------------------~~~~~~~~~~~~~~~~~~~ 323 (457)
+||++.|++|.+|+ .||.++... .+. ...+.. ....++..++|+
T Consensus 199 ADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~sp~ 277 (432)
T PRK06702 199 ANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQ-LLRDYGNCMSPF 277 (432)
T ss_pred CCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHH-HHHHccCCCCHH
Confidence 68999999998864 346555321 111 111100 111345578999
Q ss_pred HHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec---------------cCCCCeEEEEecCCcchHH
Q psy15447 324 LAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG---------------HRDTPLKYLYLQKSDDEVA 388 (457)
Q Consensus 324 ~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~---------------~~~~~~~~i~~~~~~~~~~ 388 (457)
.++.++..|+.+. .++++..+|+..+.+.|++++.+..+..++ ...+.++.+.++...
T Consensus 278 ~a~l~~rgL~Tl~---lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~~~---- 350 (432)
T PRK06702 278 NAYISNIGLETLH---LRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGGL---- 350 (432)
T ss_pred HHHHHHhccCcHH---HHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCH----
Confidence 9988888876554 477888899999999999844322222111 012457788876432
Q ss_pred HHHHHHHHHHHHHHcCeeEecc------ccCcc----c--------cCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 389 SKKLLQTICDMCIQAGFAITCP------SHLDQ----E--------AKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 389 ~~~~~~~~~~~l~~~Gi~v~~~------~~~~~----~--------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
..+.++++.|.=-.+.+..+ .+|.. . ....++.+|+++.+ ||.|.+++-|+++++-
T Consensus 351 --~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGl----Ed~eDLi~Dl~~Al~~ 424 (432)
T PRK06702 351 --EAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGI----EDVSDIIADLEAALVG 424 (432)
T ss_pred --HHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhc
Confidence 13445666553212111111 11111 0 11225689999986 4566666666666654
Q ss_pred hcC
Q psy15447 451 AVQ 453 (457)
Q Consensus 451 ~~~ 453 (457)
-++
T Consensus 425 ~~~ 427 (432)
T PRK06702 425 GKQ 427 (432)
T ss_pred Ccc
Confidence 444
No 300
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.88 E-value=2.4e-19 Score=170.88 Aligned_cols=296 Identities=17% Similarity=0.131 Sum_probs=217.4
Q ss_pred hHHHHHHHHHHHhhcCCC--cE-EEecccHHHHHHHHHhhcCCCCEEEE-eCcccHHHH-HHHHhcCCeEEEecC-----
Q psy15447 124 NVVHLDLENDIASFMGLE--ET-ALYSFGFSTSASAIAAYVKRNDAVFV-DENINFAIQ-TGLIASRCKVQYFKH----- 193 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~--~~-i~~~sG~~a~~~ai~a~~~~gd~v~~-~~~~h~~~~-~~~~~~g~~~~~~~~----- 193 (457)
.+...++.+.|...++.+ .+ ++.+||+.+.++++..+.+|||.|++ ..+.++.-+ .-+...|.++..+..
T Consensus 37 ~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~wg~~ 116 (383)
T COG0075 37 VGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGERFAEIAERYGAEVVVLEVEWGEA 116 (383)
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHHHHHHHHHHHhCCceEEEeCCCCCC
Confidence 466778888888999976 44 45578999999999999999997665 555565544 345667777765543
Q ss_pred CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccC
Q psy15447 194 NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFG 273 (457)
Q Consensus 194 ~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~ 273 (457)
-|++++++.|++. +...+|.+.+.-..||.+.|+++|.++|++||+++|+|.+.++|... +.
T Consensus 117 v~p~~v~~~L~~~---------~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~---------~~ 178 (383)
T COG0075 117 VDPEEVEEALDKD---------PDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEP---------LK 178 (383)
T ss_pred CCHHHHHHHHhcC---------CCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCCcc---------cc
Confidence 3899999999853 35567777777778999999999999999999999999998876432 34
Q ss_pred CCCCCccEEEecCcccccC-cc-cEEEecHHHHHHHHhhCCc-ce---------------ecCCCcHHHHHHHHHHHHHH
Q psy15447 274 VSTEEVDMIIGSLEHALGS-VG-GFCVGSSYIIEHHRLSGSG-YC---------------FSASLPPFLAVAANKALHLL 335 (457)
Q Consensus 274 ~~~~~~Di~~~s~sK~lg~-~g-G~v~~~~~~~~~~~~~~~~-~~---------------~~~~~~~~~~aaa~a~l~~~ 335 (457)
++..++|+++++-.|+++. +| |++..+++..+.+....++ |. +-.++|.....+..++|+.+
T Consensus 179 vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i 258 (383)
T COG0075 179 VDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLI 258 (383)
T ss_pred hhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 4445679999999999974 45 7888888887777543322 11 11234555556677888888
Q ss_pred hhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC--CCCeE-EEEecCCcchHHHHHHHHHHHHHHHHc-CeeEec
Q psy15447 336 KAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR--DTPLK-YLYLQKSDDEVASKKLLQTICDMCIQA-GFAITC 409 (457)
Q Consensus 336 ~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~--~~~~~-~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~ 409 (457)
.++ +.+.++.+++++++++.+++ .|+++..+. .++.+ .+.++.+. ...++...++++ |+.+..
T Consensus 259 ~~EGle~r~~RH~~~~~a~r~~~~a----lGl~~~~~~~~~s~tvta~~~P~g~-------~~~~~~~~~~~~~g~~i~g 327 (383)
T COG0075 259 LEEGLEARIARHRRLAEALRAGLEA----LGLELFADPERRSPTVTAIKVPEGV-------DDKKVRRALLKEYGVEIAG 327 (383)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHH----cCCccccCcccCCCceEEEECCCCC-------CcHHHHHHHHHhCCEEecc
Confidence 766 67889999999999999999 788776522 24333 34444433 222333355555 888877
Q ss_pred cccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 410 PSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 410 ~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
+..+ ..+..+||...-..+.+++...+++|+.++.++..
T Consensus 328 g~~~-----l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~ 366 (383)
T COG0075 328 GQGP-----LKGKIFRIGHMGNVRPEDVLAALAALEAALRELGV 366 (383)
T ss_pred cccc-----cCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCC
Confidence 6542 33579999988889999999999999999988754
No 301
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=2.3e-20 Score=185.53 Aligned_cols=293 Identities=14% Similarity=0.166 Sum_probs=199.3
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~ 198 (457)
.++....|++.+|++.|.+.+++++||++|+..++.+++++||.|++..+.|+.+.. .+...|.++..++..|+++
T Consensus 62 ~~p~~~~Le~~lA~leg~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~ 141 (431)
T PRK08248 62 MNPTTDVFEKRIAALEGGIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPEN 141 (431)
T ss_pred CCchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHH
Confidence 356678899999999999999999999999999999999999999999988876443 3456789999999889999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.+++ ++++|+++++.||+|.+.|+++|.++|+++|+++|+|++++.+... . .+ ..+
T Consensus 142 l~~ai~~-----------~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~---~------pl-~~g 200 (431)
T PRK08248 142 FEAAITD-----------KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLL---R------PI-EHG 200 (431)
T ss_pred HHHhcCC-----------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccccC---C------hh-HcC
Confidence 9888753 4578889999999999999999999999999999999997643211 1 11 135
Q ss_pred ccEEEecCcccccCc----ccEEEecHHHH-----------------------H---------HHHhhCCcceecCCCcH
Q psy15447 279 VDMIIGSLEHALGSV----GGFCVGSSYII-----------------------E---------HHRLSGSGYCFSASLPP 322 (457)
Q Consensus 279 ~Di~~~s~sK~lg~~----gG~v~~~~~~~-----------------------~---------~~~~~~~~~~~~~~~~~ 322 (457)
+|+++.|++|.+|+. ||+++.+.+.. + ..+. ......+..++|
T Consensus 201 aDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~G~~l~p 279 (431)
T PRK08248 201 ADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARV-QLLRDLGAALSP 279 (431)
T ss_pred CCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHH-HHHHhcCCCCCH
Confidence 689999999999754 46666433210 0 0000 011234566889
Q ss_pred HHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec---------------cCCCCeEEEEecCCcchH
Q psy15447 323 FLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG---------------HRDTPLKYLYLQKSDDEV 387 (457)
Q Consensus 323 ~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~---------------~~~~~~~~i~~~~~~~~~ 387 (457)
..|+..+..|+-+. .++++..+++..+.+.|++++.+..+..++ ...+.++.+.+++..
T Consensus 280 ~~a~l~~rgl~tl~---~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~--- 353 (431)
T PRK08248 280 FNSFLLLQGLETLH---LRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAKKYLPKGQGAILTFGIKGGV--- 353 (431)
T ss_pred HHHHHHhcCcCcHH---HHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCH---
Confidence 88888877765543 477888999999999999854332222211 012557888876432
Q ss_pred HHHHHHHHHHHHHHHcCeeEecc------ccCcc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 388 ASKKLLQTICDMCIQAGFAITCP------SHLDQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 388 ~~~~~~~~~~~~l~~~Gi~v~~~------~~~~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
..+.++.+.|.=-.+.++.+ .+|.. .....++.+||++.+. |.+.+++-|+++++
T Consensus 354 ---~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE----d~~dL~~Dl~~Al~ 426 (431)
T PRK08248 354 ---EAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLVRLSVGTE----AIDDILDDLRQAIR 426 (431)
T ss_pred ---HHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHH
Confidence 13455666554111111111 11211 0112357899999864 34445555555554
Q ss_pred H
Q psy15447 450 I 450 (457)
Q Consensus 450 ~ 450 (457)
.
T Consensus 427 ~ 427 (431)
T PRK08248 427 Q 427 (431)
T ss_pred h
Confidence 3
No 302
>KOG0259|consensus
Probab=99.88 E-value=2e-19 Score=165.42 Aligned_cols=335 Identities=14% Similarity=0.142 Sum_probs=226.0
Q ss_pred eeeEEeecCCccCCC---CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC--------CCcEEEecc
Q psy15447 80 IPCINFATHNYLSFV---ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG--------LEETALYSF 148 (457)
Q Consensus 80 ~~~id~~s~~~l~~~---~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~~~i~~~s 148 (457)
|++|-+..+++.-++ ..++..+|+.++++. |.+.+ |+...-....++++|+++. .++++++++
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~S-gk~N~-----Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsG 134 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRS-GKGNG-----YAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSG 134 (447)
T ss_pred ceeccCCCCCCCccccccCCHHHHHHHHHHHhc-CCCCC-----cCCccccHHHHHHHHHHhhcCCCCccCcCceEEecc
Confidence 577777776554443 467888999988875 33221 2222333455566666632 456788888
Q ss_pred cHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447 149 GFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFI 221 (457)
Q Consensus 149 G~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~v 221 (457)
.++|++.++.++.+||.-|+++++.+..+..-...++.+++.|+.- |++.+|.++++ +++++
T Consensus 135 C~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DE-----------NT~Ai 203 (447)
T KOG0259|consen 135 CSQAIELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADE-----------NTVAI 203 (447)
T ss_pred chHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhcc-----------CeeEE
Confidence 8999999999999999999999999888777778888888887632 78888888864 55777
Q ss_pred EEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCc-cccccCCCCCCccEEEecCcccccCc---c
Q psy15447 222 IVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGSV---G 294 (457)
Q Consensus 222 i~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~~---g 294 (457)
++.++.||.|.+.. |++|+++|+++|+.+|.||+|+..++|..-.- ....-.+.| .|.++++||.+=.+ -
T Consensus 204 vviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVP---VitlggisKrW~VPGWRl 280 (447)
T KOG0259|consen 204 VVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVP---VITLGGISKRWIVPGWRL 280 (447)
T ss_pred EEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCc---eEeecccccccccCCcee
Confidence 77778889999987 89999999999999999999998888753211 112222334 68899999988444 4
Q ss_pred cEEEecH--------HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCc-----HHHHHHHHHHHHHHHHhhcccc
Q psy15447 295 GFCVGSS--------YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANP-----SLLTKLREKCNTMHSLLSQHKV 361 (457)
Q Consensus 295 G~v~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~-----~~~~~l~~~~~~l~~~L~~~~~ 361 (457)
||++..+ .+++.+.+... -. ..|+....+|+- +++++.+ ....-++.+++.-.+.|++
T Consensus 281 GWi~~hD~~gvf~~~~~~q~~~~~~~---~~-~~p~TiiQ~AlP--~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~--- 351 (447)
T KOG0259|consen 281 GWIALHDPRGVFRDTKVVQGIKNFLD---II-PGPATIIQGALP--DILEKTPEEFFDKKLSFLKSNADLCYSRLKD--- 351 (447)
T ss_pred eeEEEecccccccchHHHHHHHHHHh---cc-CCccHhHHHHhH--HHHHhChHHHHHHHHHHHHhhHHHHHHHHhc---
Confidence 8876542 23333332211 11 123333333322 2233332 3456677888888999999
Q ss_pred cCCeEEeccCCCCe-EEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHH
Q psy15447 362 TQRFLVQGHRDTPL-KYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNS 439 (457)
Q Consensus 362 ~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~ 439 (457)
++++.+...+.+.+ .++.+.... -.+-.+-.+++++|. |+.+.+-|+.. +..+|++|+++. ...+.+++
T Consensus 352 IP~l~cp~kPeg~mylmv~l~~s~--~~~~~dD~dFc~kL~~Eesv~~LPG~a-----f~~~nw~Ri~i~--~~~~~lee 422 (447)
T KOG0259|consen 352 IPCLTCPVKPEGCMYLMVKLNLSL--FPDIEDDVDFCQKLAREESVICLPGQA-----FGLKNWLRIVIT--VEEEMLEE 422 (447)
T ss_pred CCCcccCcCCCcceEEEeccchhh--hccccccHHHHHHHhhhcceEEecccc-----ccCCCeEEEEEc--cChHHHHH
Confidence 78888654455444 344333210 000013346777775 56888888765 455899999986 47889999
Q ss_pred HHHHHHHHHHHhc
Q psy15447 440 LIETLCKSHDIAV 452 (457)
Q Consensus 440 ~~~~l~~~~~~~~ 452 (457)
+++.|+++..+-.
T Consensus 423 a~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 423 AFSRIKEFCDRHS 435 (447)
T ss_pred HHHHHHHHHHhhh
Confidence 9999999887654
No 303
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.88 E-value=5.4e-20 Score=180.58 Aligned_cols=210 Identities=13% Similarity=0.165 Sum_probs=156.8
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~ 198 (457)
.++...+|+++++++.|.+.+++++||+.|+..++ .++++||.|++..+.|+.... .+...|.++..++..|+++
T Consensus 48 ~~p~~~~Le~~la~l~g~~~al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e~ 126 (380)
T PRK06176 48 GNPTRFALEELIADLEGGVKGFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLSQ 126 (380)
T ss_pred CChhHHHHHHHHHHHhCCCCEEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHHH
Confidence 35668899999999999999999999999988666 567999999998887776543 2455678888888888999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.++ +++++|++|++.||+|.+.|+++|.++|++||+++|+|++++.+..+. . +. .+
T Consensus 127 l~~ai~-----------~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~---p------~~-~g 185 (380)
T PRK06176 127 IKKAIK-----------PNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQN---P------LL-LG 185 (380)
T ss_pred HHHhcC-----------cCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCC---c------cc-cC
Confidence 988774 346899999999999999999999999999999999999987553321 1 11 24
Q ss_pred ccEEEecCcccccC----cccEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGS----VGGFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 279 ~Di~~~s~sK~lg~----~gG~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~ 353 (457)
+|+++.|++|.+++ .||+++++ +++.+.++... ...+..++|..+......++.+ +.++++..++...+.
T Consensus 186 aDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~--~~~G~~~~~~~~~l~~~gl~tl---~~R~~~~~~~a~~la 260 (380)
T PRK06176 186 ADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQ--NAIGGVLGPQDSWLLQRGIKTL---GLRMEAHQKNALCVA 260 (380)
T ss_pred CCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHH--HHhcCCCCHHHHHHHHhccCcH---HHHHHHHHHHHHHHH
Confidence 58999999999964 36777764 55655554322 1123335666655554444333 336677778888888
Q ss_pred HHhhcc
Q psy15447 354 SLLSQH 359 (457)
Q Consensus 354 ~~L~~~ 359 (457)
+.|++.
T Consensus 261 ~~L~~~ 266 (380)
T PRK06176 261 EFLEKH 266 (380)
T ss_pred HHHHhC
Confidence 888874
No 304
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.88 E-value=4.8e-20 Score=180.86 Aligned_cols=211 Identities=18% Similarity=0.193 Sum_probs=162.8
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~ 198 (457)
..+...+|+++++++.|.+.+++++||+.++..++ .++++||.|++..+.|++... .+...|.++..++..|+++
T Consensus 48 ~~p~~~~Le~~lA~l~g~~~~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~ 126 (377)
T PRK07671 48 GNPTRAALEELIAVLEGGHAGFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLEE 126 (377)
T ss_pred CChHHHHHHHHHHHHhCCCceEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHHH
Confidence 45678999999999999999999999998877665 577899999999998875543 2344688888888889999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.+++ ++++|++|+++||+|.+.++++|.++|+++|+++|+||+++.+..+. . .. .+
T Consensus 127 l~~ai~~-----------~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~---p----~~---~g 185 (377)
T PRK07671 127 VEEAIRP-----------NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQS---P----IS---LG 185 (377)
T ss_pred HHHhcCC-----------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCC---h----hh---hC
Confidence 9888753 46799999999999999999999999999999999999986543321 1 11 24
Q ss_pred ccEEEecCcccccC----cccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGS----VGGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 279 ~Di~~~s~sK~lg~----~gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~ 353 (457)
+|+++.|++|++|+ .+|+++. ++++++.++... ...+..++|..+..++..++.+. .++++..++...+.
T Consensus 186 ~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~--~~~g~~~~~~~a~l~~~~l~tl~---~R~~~~~~na~~la 260 (377)
T PRK07671 186 ADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQ--NSTGGILGPQDSWLLLRGLKTLG---IRMEEHETNSRAIA 260 (377)
T ss_pred CeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHH--HhhcCCCCHHHHHHHHcCcChHH---HHHHHHHHHHHHHH
Confidence 58999999999974 3576555 566776665322 12244578888887776665554 36788889999999
Q ss_pred HHhhccc
Q psy15447 354 SLLSQHK 360 (457)
Q Consensus 354 ~~L~~~~ 360 (457)
+.|++.+
T Consensus 261 ~~L~~~~ 267 (377)
T PRK07671 261 EFLNNHP 267 (377)
T ss_pred HHHHcCC
Confidence 9998843
No 305
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.88 E-value=6.7e-20 Score=176.00 Aligned_cols=292 Identities=19% Similarity=0.226 Sum_probs=207.5
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~ 198 (457)
.++....||+.++.+-|.+.++.++||..|+..++.++.++||+|+.....|+.+..- ++..|.++..++..+.+.
T Consensus 61 ~nPT~~~lE~~~a~LEg~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~~ 140 (396)
T COG0626 61 GNPTRDALEEALAELEGGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDEA 140 (396)
T ss_pred CCccHHHHHHHHHHhhCCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChHH
Confidence 3677899999999999999999999999999999999999999999988877765542 345688888888777777
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.+.+ +++++|++|++.||+-.+.++++|+++|+++|+++|+|+.++.+.+- ..+ +.+
T Consensus 141 ~~~~~~~----------~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q---------~PL-~~G 200 (396)
T COG0626 141 LEAAIKE----------PNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQ---------RPL-ELG 200 (396)
T ss_pred HHHHhcc----------cCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCccccccc---------Chh-hcC
Confidence 7777653 36789999999999999999999999999999999999997755431 112 135
Q ss_pred ccEEEecCcccccC----cccEEEecH-HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGS----VGGFCVGSS-YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 279 ~Di~~~s~sK~lg~----~gG~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~ 353 (457)
+||++.|.+|.+|+ .||+++++. ++.+.+..... ...+..+.|.-+...+..++-+. .++++..+|+..+.
T Consensus 201 aDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~-~~~G~~l~p~dA~l~lRGlkTL~---~Rm~~~~~nA~~IA 276 (396)
T COG0626 201 ADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQR-ANTGAVLSPFDAWLLLRGLRTLA---LRMERHNENALKIA 276 (396)
T ss_pred CCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHH-hhcCCCCCHHHHHHHHhccchHH---HHHHHHHHHHHHHH
Confidence 69999999999974 467777654 45444422221 13556689999888888876664 37888999999999
Q ss_pred HHhhcccccCCeEEecc--------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecc------ccC
Q psy15447 354 SLLSQHKVTQRFLVQGH--------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCP------SHL 413 (457)
Q Consensus 354 ~~L~~~~~~~~~~~~~~--------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~------~~~ 413 (457)
+.|++++.+..+..++. ..+.++.+.+.+.. .+.++.+.|.--.+..+.+ .+|
T Consensus 277 ~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~-------~~~~f~~~L~l~~~a~SlGgveSLi~~p 349 (396)
T COG0626 277 EFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEE-------AAKKFLDSLKLFKLAESLGGVESLISHP 349 (396)
T ss_pred HHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChH-------HHHHHHHhCCccEEeccCCCcccccccc
Confidence 99988443322222210 14678888888742 4556666654322222211 222
Q ss_pred cc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 414 DQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 414 ~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
.. .....++.+|+++.... ++.+++-|+++++
T Consensus 350 a~~th~~~~~~~r~~~Gi~~~LvRlSVGlEd----~eDLi~Dl~~Al~ 393 (396)
T COG0626 350 ATMTHASIPLEERAKAGITDGLVRLSVGLED----VEDLIADLEQALA 393 (396)
T ss_pred cccCcccCCHhHHHhcCCCCCeEEEEecCCC----HHHHHHHHHHHHH
Confidence 11 12233678999998654 4444444444443
No 306
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.88 E-value=5.8e-20 Score=184.46 Aligned_cols=338 Identities=12% Similarity=-0.009 Sum_probs=198.1
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHH-HHHHhhcC----CC---cEEEecccHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLE-NDIASFMG----LE---ETALYSFGFS 151 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~-~~la~~~g----~~---~~i~~~sG~~ 151 (457)
+.+++++-+.+ ++.. |++..++.+.+. +..+ ....|..+..+++. +.+.+..+ .+ ++++++++++
T Consensus 94 ~~~i~l~~g~p-~~~~-~~~~~~~~~~~~--~~~Y---~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~ 166 (521)
T TIGR03801 94 RDIISYVIDQL-GFDP-DAFLYEMCDGII--GDNY---PVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTA 166 (521)
T ss_pred HHHHhhcCCCC-CCCC-CHHHHHHHHHhh--cCCC---CCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHH
Confidence 34566666544 5653 455566666653 2221 11223444444444 33333322 22 4556667778
Q ss_pred HHHHHHHh-----hcCCCCEEEEeCcccHHHHHHHHhc--CCeEEEecC------------CCHHHHHHHHHhhchhccc
Q psy15447 152 TSASAIAA-----YVKRNDAVFVDENINFAIQTGLIAS--RCKVQYFKH------------NNMQHLEELLRQQDERDTL 212 (457)
Q Consensus 152 a~~~ai~a-----~~~~gd~v~~~~~~h~~~~~~~~~~--g~~~~~~~~------------~d~~~le~~l~~~~~~~~~ 212 (457)
|+..++.+ ++.+||.|++..++|..+...+.+. +.+++.++. .|++++++++.
T Consensus 167 al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~-------- 238 (521)
T TIGR03801 167 AMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD-------- 238 (521)
T ss_pred HHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcC--------
Confidence 88887776 6899999999999999888877765 556555442 14566665432
Q ss_pred CCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHc--CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCc
Q psy15447 213 NSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKY--QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE 287 (457)
Q Consensus 213 ~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s 287 (457)
++++++++.+++||+|.+.+ +++|.++|++| ++++|.||+|+.... ....+.. ..+++ .|++.|||
T Consensus 239 ---~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~~~sl~~---~~~~~-vI~v~SfS 309 (521)
T TIGR03801 239 ---PSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD--DFRSLFA---ELPYN-TIGVYSFS 309 (521)
T ss_pred ---CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc--cccchhh---hCCCC-EEEEEcch
Confidence 35677777788999999998 67888889987 999999999975332 1112212 22333 48899999
Q ss_pred ccccCcc---cEEEecHH-----HHH--------HH------------------------HhhCCcceecCCCcHHHH--
Q psy15447 288 HALGSVG---GFCVGSSY-----IIE--------HH------------------------RLSGSGYCFSASLPPFLA-- 325 (457)
Q Consensus 288 K~lg~~g---G~v~~~~~-----~~~--------~~------------------------~~~~~~~~~~~~~~~~~~-- 325 (457)
|.+|++| ||++++++ ++. .+ +.....++.+.+ .|...
T Consensus 310 K~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s-~p~Q~q~ 388 (521)
T TIGR03801 310 KYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLS-TPQQVQM 388 (521)
T ss_pred hhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCC-cHHHHHH
Confidence 9998776 99988754 221 11 111111122222 22222
Q ss_pred H--HHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc---h-HHH-----HHHH
Q psy15447 326 V--AANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD---E-VAS-----KKLL 393 (457)
Q Consensus 326 a--aa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~-~~~-----~~~~ 393 (457)
+ ++.+.++.-+. .++.++.++++.+.+.+.| . ..+....+..+..+++.+..-.. . +.. ....
T Consensus 389 al~a~~all~~~~~y~~~~~~~~~~R~~~l~~~L-g----~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~ 463 (521)
T TIGR03801 389 ALFSLFALMDKENAYKAETKDICRRREKLLFRGL-G----LPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSP 463 (521)
T ss_pred HHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhc-C----CCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCH
Confidence 2 22223221111 1234566777777776665 2 11212223334555565542100 0 000 0023
Q ss_pred HHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 394 QTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 394 ~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
.+++.+|.++ ||.+.|+..+. ...+++|+++.. .++++++++.+.|++++++..
T Consensus 464 ~~~~~~L~~e~gV~v~PG~~Fg----~~~~~vRisla~-l~~~~~~~~~~rl~~~~~~~~ 518 (521)
T TIGR03801 464 VDVLFRLAEETGIVLLPGGGFG----GPEWSVRVSLAN-LNEYDYAEIGRAIRKILDEYY 518 (521)
T ss_pred HHHHHHHHHhCCEEEeCchhcC----CCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHH
Confidence 5677777765 99999887542 224689999953 689999999999999987654
No 307
>PLN02368 alanine transaminase
Probab=99.88 E-value=3.8e-20 Score=183.03 Aligned_cols=252 Identities=11% Similarity=0.090 Sum_probs=172.1
Q ss_pred ccChHHHHHHHHHHHhhcCC----CcEEEecccHHHHHHHHHhhc-CCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--
Q psy15447 121 YGTNVVHLDLENDIASFMGL----EETALYSFGFSTSASAIAAYV-KRNDAVFVDENINFAIQTGLIASRCKVQYFKH-- 193 (457)
Q Consensus 121 ~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~~~ai~a~~-~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-- 193 (457)
.|..++.+.+++.+.+..|. +++++++++++++..++.+++ ++||.|++..++|..+...+...|.+++.++.
T Consensus 107 ~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~ 186 (407)
T PLN02368 107 RGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLLGGTLVPYYLEE 186 (407)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeccc
Confidence 34555555566555554452 344555556689998999887 79999999999999999999999988877653
Q ss_pred -----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCC
Q psy15447 194 -----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTG 265 (457)
Q Consensus 194 -----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g 265 (457)
.|++++++.++..... ..+++++++.+++||||.+.+ +++|.++|++||+++|.||+|+...++...
T Consensus 187 ~~~~~~d~~~le~~i~~~~~~-----~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~ 261 (407)
T PLN02368 187 SENWGLDVNNLRQSVAQARSK-----GITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDER 261 (407)
T ss_pred ccCCCCCHHHHHHHHHHHhhc-----CCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC
Confidence 3688898888642210 124677777778999999998 678888999999999999999876553211
Q ss_pred C--cccccc-CCCC----CCccEEEecCcccc-cCcc---cEEE---ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHH
Q psy15447 266 H--GVTEYF-GVST----EEVDMIIGSLEHAL-GSVG---GFCV---GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKA 331 (457)
Q Consensus 266 ~--~~~~~~-~~~~----~~~Di~~~s~sK~l-g~~g---G~v~---~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~ 331 (457)
. .+.... ++.+ ....|+++||||++ |.+| ||++ +++++++.+.... ...+ +.+.++..++.++
T Consensus 262 ~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~-~~~~--~~~~~~Q~aa~~~ 338 (407)
T PLN02368 262 PFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVA-SIAL--SPNVSGQIFMGLM 338 (407)
T ss_pred CcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHh-cccC--CCCcHHHHHHHHH
Confidence 1 111110 1111 12358899999998 6555 9988 4888888876642 2222 3455666666666
Q ss_pred HHH-----------HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCC
Q psy15447 332 LHL-----------LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKS 383 (457)
Q Consensus 332 l~~-----------~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~ 383 (457)
++. .++..++++.++++++.+.+.|++ ++|+.+..+.++..+|..+.-+
T Consensus 339 l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~---~~g~~~~~P~Gafy~~~~i~lp 398 (407)
T PLN02368 339 VNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNS---CKNVVCNFTEGAMYSFPQIKLP 398 (407)
T ss_pred hCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCeEeCCCCeeeEeccCCCCC
Confidence 631 111123567888999999999998 5788887555566666555544
No 308
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.88 E-value=8.1e-20 Score=160.51 Aligned_cols=328 Identities=12% Similarity=0.096 Sum_probs=224.2
Q ss_pred hhHHHHHHHHHhcCCCCCC------CCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeC
Q psy15447 98 DIEKCAIDCIDKNGVGSCG------PRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDE 171 (457)
Q Consensus 98 ~i~~a~~~~l~~~~~~~~~------~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~ 171 (457)
-+.+++++++-.||-+++- -++-.-+.++...+-+.|++|+|.+.+.++++.-+|-.+++.+++++||.|++|.
T Consensus 28 iLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D~~R~t~GARe~KfavMhal~~~gd~vV~D~ 107 (382)
T COG1103 28 ILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMDEVRVTAGAREAKFAVMHALCKEGDWVVVDS 107 (382)
T ss_pred cCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCCceeeecccchhhHHHHHHHhccCCCEEEEcC
Confidence 3556777777777755432 2222334667778888899999999999999988999999999999999999999
Q ss_pred cccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHH
Q psy15447 172 NINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS 244 (457)
Q Consensus 172 ~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~ 244 (457)
.+|.++.-++...|.++..+|+. +++...+.|++..++ ..+.+++.++.++-+.-|.+.+.+++.++|+
T Consensus 108 ~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~----~g~~~~lallTh~Dg~YGNl~Dakkva~ic~ 183 (382)
T COG1103 108 LAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDE----GGDPPALALLTHVDGEYGNLADAKKVAKICR 183 (382)
T ss_pred cchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhc----cCCCceEEEEeccCCCcCCchhhHHHHHHHH
Confidence 99999999999999999988854 577777777765432 1245678888889999999999999999999
Q ss_pred HcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhC-Ccc------e
Q psy15447 245 KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSG-SGY------C 315 (457)
Q Consensus 245 ~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~-~~~------~ 315 (457)
+||+.+++..+|+.|++.-+++ . -++|++++|-+|+++. +.|.+..+.++.+.....+ ..+ .
T Consensus 184 e~gvPlllN~AYt~Grmpvs~k------e---~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvel 254 (382)
T COG1103 184 EYGVPLLLNCAYTVGRMPVSGK------E---IGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVEL 254 (382)
T ss_pred HcCCceEeecceeecccccccc------c---cCCCEEEecCccchhccCCeeEEeehhHHHHHHHhhcccccccceeee
Confidence 9999999999999888754332 1 2458999999999964 4599999998888764333 211 1
Q ss_pred ecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc--CCCCeEEEEecCCcch-HHHHHH
Q psy15447 316 FSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH--RDTPLKYLYLQKSDDE-VASKKL 392 (457)
Q Consensus 316 ~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~-~~~~~~ 392 (457)
++.+.-.......++++-...+.-.++..--+++++|.+.|++ +.|+...+. ...-++.+..+.-.+. ......
T Consensus 255 lGCT~rGapivTlmASfP~V~eRVkrWdeEv~kaR~fv~elEk---igg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~ 331 (382)
T COG1103 255 LGCTVRGAPIVTLMASFPHVVERVKRWDEEVEKARWFVAELEK---IGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRK 331 (382)
T ss_pred ecccccCchHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH---hhhHHHhCCCCcccceeeecCchHHHHHHhCcCC
Confidence 2222111112333444433333212333444678889888888 344443332 2222333322210000 000012
Q ss_pred HHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 393 LQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 393 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
..-+.+.|.++||.-.. +....++.+++ +..+.|+++..+++++++++.
T Consensus 332 gyFlY~ELK~RgI~GI~--------~G~Tk~~K~sv-yGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 332 GYFLYEELKKRGIHGIQ--------PGQTKYFKLSV-YGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred ceeeHHHHHhcCccccc--------cCceeEEEEEe-ecCCHHHHHHHHHHHHHHHHh
Confidence 23467888888875322 12245788887 558999999999999998764
No 309
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.88 E-value=6.9e-20 Score=179.32 Aligned_cols=283 Identities=17% Similarity=0.203 Sum_probs=194.8
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHHH
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQHL 199 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~l 199 (457)
.+...+|++++|++. .+.++++++|++|+..++.+++++||.|++..+.|+.+... +...|.++..++.++...
T Consensus 50 ~p~~~~Le~~lA~l~-~~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~- 127 (366)
T PRK07582 50 NPTWRALEAALGELE-GAEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE- 127 (366)
T ss_pred CccHHHHHHHHHHHc-CCCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH-
Confidence 456789999999999 67889999999999999999999999999988877665443 234688888888765432
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV 279 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~ 279 (457)
... +++++|++|+++||+|.+.++++|.++|+++|+++++|++|..+ .|. .. .. .++
T Consensus 128 -~~~------------~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~-~~~---~p---~~---~g~ 184 (366)
T PRK07582 128 -AAL------------AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATP-LGQ---RP---LE---LGA 184 (366)
T ss_pred -Hhc------------cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCc-ccc---Cc---hh---cCC
Confidence 111 35678889999999999999999999999999999999998532 121 11 11 234
Q ss_pred cEEEecCcccccC-c---ccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447 280 DMIIGSLEHALGS-V---GGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS 354 (457)
Q Consensus 280 Di~~~s~sK~lg~-~---gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~ 354 (457)
|++++|++|++++ . +||+++ ++++++.++.... ..+..++|+.++.++..++.+. .++++..+++..+.+
T Consensus 185 Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~--~~g~~~~~~~a~l~~r~l~tl~---~R~~~~~~na~~la~ 259 (366)
T PRK07582 185 DLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRL--LAGAIPGPFEAWLAHRSLGTLG---LRFARQCANALAVAE 259 (366)
T ss_pred cEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHH--HhCCCCCHHHHHHHHhccccHH---HHHHHHHHHHHHHHH
Confidence 8999999999954 2 488876 4677776653221 2234568888887777766443 467888899999999
Q ss_pred HhhcccccCCeEEec---cC-----------CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc---Ccc--
Q psy15447 355 LLSQHKVTQRFLVQG---HR-----------DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH---LDQ-- 415 (457)
Q Consensus 355 ~L~~~~~~~~~~~~~---~~-----------~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~---~~~-- 415 (457)
.|++++.+..+..++ .+ .+.++.+.+++.. . +.+.+...++....... -+.
T Consensus 260 ~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~~~-------~---~~~~~~~l~~~~~~~s~G~~~sl~~ 329 (366)
T PRK07582 260 LLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELADAA-------A---AERFVAASRLVVAATSFGGVHTSAD 329 (366)
T ss_pred HHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCCHH-------H---HHHHHHhCCcceecccCCCccchhh
Confidence 999855444443322 11 3567888886321 2 33333344554321111 000
Q ss_pred -----ccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 416 -----EAKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 416 -----~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
.....++.+|+++++...++.++.+.++|++
T Consensus 330 ~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~~ 365 (366)
T PRK07582 330 RRARWGDAVPEGFVRLSCGIEDTDDLVADLERALDA 365 (366)
T ss_pred hHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 0012246899999998887778877777753
No 310
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.88 E-value=4.6e-20 Score=183.65 Aligned_cols=213 Identities=17% Similarity=0.184 Sum_probs=154.7
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~ 198 (457)
.++...+|+++||++.|.+.+++++||++|+..++.+++++||.|++..+.|+.+.. .+...|.++..++.+|+++
T Consensus 55 ~~p~~~~le~~lA~l~g~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~ 134 (418)
T TIGR01326 55 MNPTTDVLEQRIAALEGGVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEE 134 (418)
T ss_pred CChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHH
Confidence 356678999999999999999999999999999999999999999998887765433 3456788999998889999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.+++ ++++|++|+++||+|.+.|+++|+++|++||+++|+|++++.+.... . . ..+
T Consensus 135 l~~~l~~-----------~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~~~-------~--l-~~g 193 (418)
T TIGR01326 135 FEKAIDE-----------NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYLCR-------P--I-DHG 193 (418)
T ss_pred HHHhcCc-----------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhcCC-------c--h-hcC
Confidence 9888753 45788899999999999999999999999999999999987542211 1 1 124
Q ss_pred ccEEEecCcccccCcc----cEEEecHHHHHH-------------------------------HHhhCCcceecCCCcHH
Q psy15447 279 VDMIIGSLEHALGSVG----GFCVGSSYIIEH-------------------------------HRLSGSGYCFSASLPPF 323 (457)
Q Consensus 279 ~Di~~~s~sK~lg~~g----G~v~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~ 323 (457)
+|+++.|++|++|+.| |+++.++.+... .+.... ...+..++|.
T Consensus 194 ~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~-~~~G~~~~p~ 272 (418)
T TIGR01326 194 ADIVVHSATKYIGGHGTAIGGVIVDGGKFDWANGRFPLFTTPDPSYHGLVFTETFGNPAFIVKARVQLL-RDLGAALSPF 272 (418)
T ss_pred CeEEEECccccccCCccceEEEEEecccccccccccccccCCCCccccchhhhhhchhhHHHHHHHHHH-HhcCCCCCHH
Confidence 5999999999997643 444433221100 000000 0112344666
Q ss_pred HHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccc
Q psy15447 324 LAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHK 360 (457)
Q Consensus 324 ~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~ 360 (457)
.+..++..++-+ ..++++..+++..+.+.|.+.+
T Consensus 273 ~a~~~~~~l~tl---~~R~~~~~~~a~~la~~L~~~~ 306 (418)
T TIGR01326 273 NAFLLLQGLETL---SLRMERHVENALKVAEFLEAHP 306 (418)
T ss_pred HHHHHHCCcccH---HHHHHHHHHHHHHHHHHHHhCC
Confidence 666555444333 2355666678888888888743
No 311
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.87 E-value=9.2e-20 Score=177.50 Aligned_cols=290 Identities=20% Similarity=0.249 Sum_probs=196.6
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~ 198 (457)
.++....||+.|+++.|.+.+++++||..|+..++.+++++||.|++....|+.+..-+ ...|.++..++..|+++
T Consensus 53 gnPt~~~le~~la~Le~g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~ 132 (386)
T PF01053_consen 53 GNPTVRALEQRLAALEGGEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEA 132 (386)
T ss_dssp C-HHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHH
T ss_pred ccccHHHHHHHHHHhhcccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHH
Confidence 47888999999999999999999999999999999999999999999998888776544 44689999999999999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcC-cEEEEEcCcccccccCCCCccccccCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQ-ARIFVDESVSFGTLGSTGHGVTEYFGVSTE 277 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g-~~li~DEa~~~g~~g~~g~~~~~~~~~~~~ 277 (457)
+++.+++ ++++|++|++.||+..+.++++|+++|+++| +++++|..++.+..- . .+. .
T Consensus 133 l~~~l~~-----------~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~-------~--pL~-~ 191 (386)
T PF01053_consen 133 LEAALRP-----------NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYNQ-------N--PLE-L 191 (386)
T ss_dssp HHHHHCT-----------TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTTC----------GGG-G
T ss_pred HHhhccc-----------cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceeee-------c--cCc-C
Confidence 9999964 6789999999999999999999999999998 999999987543211 0 011 2
Q ss_pred CccEEEecCcccccC----cccEEEec--HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q psy15447 278 EVDMIIGSLEHALGS----VGGFCVGS--SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNT 351 (457)
Q Consensus 278 ~~Di~~~s~sK~lg~----~gG~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~ 351 (457)
++||++.|++|.+++ .||+++.+ +++.+.++... ..++..++|..|...+..++-+. .++++..+++..
T Consensus 192 GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~--~~~G~~~~p~da~ll~rgl~Tl~---~R~~~~~~nA~~ 266 (386)
T PF01053_consen 192 GADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFR--RLLGATLSPFDAWLLLRGLRTLP---LRMERQNENAEA 266 (386)
T ss_dssp T-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHH--HHHT-B--HHHHHHHHHHHTTHH---HHHHHHHHHHHH
T ss_pred CceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchh--hhcCccchHHHHHHHhcCCCcHH---HHHHHHHHHHHH
Confidence 459999999999964 35777755 46766665332 34556678888887777765553 478899999999
Q ss_pred HHHHhhcccccCCeEEecc--------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccc------
Q psy15447 352 MHSLLSQHKVTQRFLVQGH--------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPS------ 411 (457)
Q Consensus 352 l~~~L~~~~~~~~~~~~~~--------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------ 411 (457)
+.+.|++++.+..+..++- ..+.++.+.+++.. ..+.++.+.|.=-++..+.+.
T Consensus 267 lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~------~~~~~f~~~l~l~~~~~SlGg~~SLi~ 340 (386)
T PF01053_consen 267 LAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGE------EAARRFLDALKLFSIAPSLGGVESLIS 340 (386)
T ss_dssp HHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHH------HHHHHHHHH-SSSEESSS-SSSS-EEE
T ss_pred HHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccch------hhhHhHHhhhhhHhhhhhcCCcccccc
Confidence 9999998543333333211 22468888888752 145566666641111111111
Q ss_pred cCcc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 412 HLDQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 412 ~~~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
+|.. .....++.+|+++.+. |.+.+++-|++++
T Consensus 341 ~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGlE----d~~dLi~Dl~~AL 385 (386)
T PF01053_consen 341 HPASTSHRSLSPEERAEAGISDGLIRLSVGLE----DPDDLIADLEQAL 385 (386)
T ss_dssp ETTCTTTTTSCHHHHHHTTS-TTEEEEE--SS-----HHHHHHHHHHHH
T ss_pred cccchhhccCChhhhhccCCCCCeeEEEeccC----CHHHHHHHHHHhc
Confidence 1111 0122357899999864 4555566665554
No 312
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.87 E-value=6.8e-20 Score=182.10 Aligned_cols=248 Identities=14% Similarity=0.143 Sum_probs=179.8
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~ 198 (457)
.++...++|+++|++.|.+.+++++||++|+..++.++.++||.|++....|+++...+ ...|.++.+++.+|+++
T Consensus 62 ~~p~~~~le~~lA~l~g~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~~ 141 (433)
T PRK08134 62 SNPTVAVLEERVAALEGGVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDIDG 141 (433)
T ss_pred cChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHHH
Confidence 45778999999999999999999999999999999988999999999999888765543 33688899998889999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.|.. ++++|+++++.|++|.+.|+++|.++|++||+++|+|.+++.+.... .+ ..+
T Consensus 142 l~~~i~~-----------~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~~---------pl-~~G 200 (433)
T PRK08134 142 WRAAIRP-----------NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLR---------PF-EHG 200 (433)
T ss_pred HHHhcCC-----------CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccCC---------ch-hcC
Confidence 9988853 56889999999999999999999999999999999999987654311 11 135
Q ss_pred ccEEEecCcccccCcc----cEEEecHH--------------------------------HHHHHHhhCCcceecCCCcH
Q psy15447 279 VDMIIGSLEHALGSVG----GFCVGSSY--------------------------------IIEHHRLSGSGYCFSASLPP 322 (457)
Q Consensus 279 ~Di~~~s~sK~lg~~g----G~v~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~ 322 (457)
+|+++.|.+|.+|+.| |+++.... .....+... ...++..++|
T Consensus 201 aD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~G~~ls~ 279 (433)
T PRK08134 201 ADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREG-LRDFGACLSP 279 (433)
T ss_pred CCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHH-HHhcCCCCCH
Confidence 6899999999997543 55543210 000011000 1133455788
Q ss_pred HHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec---------------cCCCCeEEEEecCCcchH
Q psy15447 323 FLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG---------------HRDTPLKYLYLQKSDDEV 387 (457)
Q Consensus 323 ~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~---------------~~~~~~~~i~~~~~~~~~ 387 (457)
..|+..+..|+.+. .++++..+++..+.+.|++++.+..+..++ ...+.++.+.++.+.
T Consensus 280 ~~A~l~~~gL~tl~---~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg~~s~~l~~~~--- 353 (433)
T PRK08134 280 MNAWQLLQGIETLP---LRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAKRLLPRGAGSVFSFDLKGGR--- 353 (433)
T ss_pred HHHHHHhcCCCcHH---HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEecCCH---
Confidence 88887777765543 478888999999999998854332222111 123567788876432
Q ss_pred HHHHHHHHHHHHHH
Q psy15447 388 ASKKLLQTICDMCI 401 (457)
Q Consensus 388 ~~~~~~~~~~~~l~ 401 (457)
..+.+|.+.|.
T Consensus 354 ---~~~~~f~~~l~ 364 (433)
T PRK08134 354 ---AAGRKFIESLK 364 (433)
T ss_pred ---HHHHHHHHhCC
Confidence 14456666654
No 313
>PRK02769 histidine decarboxylase; Provisional
Probab=99.87 E-value=2.8e-19 Score=174.74 Aligned_cols=289 Identities=13% Similarity=0.084 Sum_probs=206.6
Q ss_pred cChHHHHHHHHHHHhhcCCC--c--EEEecccHHHHHHHHHhhc--CCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--
Q psy15447 122 GTNVVHLDLENDIASFMGLE--E--TALYSFGFSTSASAIAAYV--KRNDAVFVDENINFAIQTGLIASRCKVQYFKH-- 193 (457)
Q Consensus 122 g~~~~~~~l~~~la~~~g~~--~--~i~~~sG~~a~~~ai~a~~--~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-- 193 (457)
.+.+...++.+.+++++|.+ . .+++++|+++|..++.+.. .+++.|+++...|.+..++++..|.+...++.
T Consensus 62 ~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~ 141 (380)
T PRK02769 62 NSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSLP 141 (380)
T ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccCC
Confidence 35567778888999999864 3 3677888999988876543 56789999999999999998888866555443
Q ss_pred ---CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcC---cEEEEEcCcccccccCCCCc
Q psy15447 194 ---NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQ---ARIFVDESVSFGTLGSTGHG 267 (457)
Q Consensus 194 ---~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g---~~li~DEa~~~g~~g~~g~~ 267 (457)
.|+++|++.+.+.+ .++.+|++..+++++|.+.|+++|.++|++|| +++++|.+++.+.+.... .
T Consensus 142 ~g~id~~~L~~~i~~~~--------~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~-~ 212 (380)
T PRK02769 142 NGEIDYDDLISKIKENK--------NQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVN-N 212 (380)
T ss_pred CCcCcHHHHHHHHHhCC--------CCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccC-c
Confidence 38899999987632 35678889999999999999999999999998 699999999876653110 0
Q ss_pred cccccCCCCCCccEEEecCccccc-Cc-ccEEEecHHHHHHHHhhC-----CcceecCCCcHHHHHHHHHHHHHHhhC--
Q psy15447 268 VTEYFGVSTEEVDMIIGSLEHALG-SV-GGFCVGSSYIIEHHRLSG-----SGYCFSASLPPFLAVAANKALHLLKAN-- 338 (457)
Q Consensus 268 ~~~~~~~~~~~~Di~~~s~sK~lg-~~-gG~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~aaa~a~l~~~~~~-- 338 (457)
. ..++.. .++|.++.|.||.+| +. .|++..+++..+.+.... ...+..++.+...+++.-++|+.+...
T Consensus 213 ~-~~~d~~-~~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~ 290 (380)
T PRK02769 213 P-PPFSFA-DGIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGL 290 (380)
T ss_pred c-ccCCcc-CCCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHH
Confidence 0 013332 267999999999987 33 377777776655542211 112233444444555555666666443
Q ss_pred cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccC
Q psy15447 339 PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAK 418 (457)
Q Consensus 339 ~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~ 418 (457)
.+..++..++++++.+.|++ .|+++...+...++.+..+.+ .+. +|..+.+.
T Consensus 291 ~~~~~~~~~la~~l~~~L~~----~g~~~~~~p~~~~v~f~~~~~-----------~~~-----~~w~l~~~-------- 342 (380)
T PRK02769 291 RQRVQHCLDMAQYAVDRLQA----NGIPAWRNPNSITVVFPCPSE-----------RIW-----KKWHLATS-------- 342 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHh----CCCEEEcCCCceEEEEcCCCH-----------HHH-----hCeeEccc--------
Confidence 45678888999999999988 688887777777776643321 221 46544432
Q ss_pred CCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 419 KQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 419 ~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
.+.+|+++...+|++.+|++++-|.+.....
T Consensus 343 --~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~~ 373 (380)
T PRK02769 343 --GNQAHIITMPHHNKQQIDSLIDELIFDLKNP 373 (380)
T ss_pred --CCEEEEEECCCCCHHHHHHHHHHHHHHHhcc
Confidence 2589999999999999999999998877633
No 314
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.87 E-value=4.9e-19 Score=176.62 Aligned_cols=292 Identities=14% Similarity=0.121 Sum_probs=201.8
Q ss_pred HHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh---------cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-
Q psy15447 125 VVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY---------VKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN- 194 (457)
Q Consensus 125 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~---------~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~- 194 (457)
+...++++++++++|.+.+++++||++|+..++.++ .++||.|++..+.|.++...+...|.+++.++.+
T Consensus 63 ~~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~ 142 (438)
T PRK15407 63 RFNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVEL 142 (438)
T ss_pred hhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCC
Confidence 447899999999999999999999999999998876 4789999999999999999999999888776532
Q ss_pred -----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccc
Q psy15447 195 -----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVT 269 (457)
Q Consensus 195 -----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~ 269 (457)
|++++++.+. +++++|+++++ .|...++++|+++|++||+++|+|++|++|..-. |+..
T Consensus 143 ~~~~id~~~le~~i~-----------~~tkaVi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~-g~~~- 206 (438)
T PRK15407 143 PTYNIDASLLEAAVS-----------PKTKAIMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYD-GRMT- 206 (438)
T ss_pred CcCCcCHHHHHHHcC-----------cCCeEEEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhcC-Ceee-
Confidence 6778887764 24577777765 4667899999999999999999999999876421 2211
Q ss_pred cccCCCCCCccEEEecCc--cccc-CcccEEEecH-HHHHHH---HhhCCc-----------------------------
Q psy15447 270 EYFGVSTEEVDMIIGSLE--HALG-SVGGFCVGSS-YIIEHH---RLSGSG----------------------------- 313 (457)
Q Consensus 270 ~~~~~~~~~~Di~~~s~s--K~lg-~~gG~v~~~~-~~~~~~---~~~~~~----------------------------- 313 (457)
..+| |+.+.||+ |.+. +.||+++.++ ++.+.+ +..+..
T Consensus 207 G~~g------d~~~fSf~~~k~~~~geGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (438)
T PRK15407 207 GTFG------DIATLSFYPAHHITMGEGGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHK 280 (438)
T ss_pred eccC------ceEEEeCCCCCCccccCceEEEECCHHHHHHHHHHHHhCccccccccccccccccccccccccccccccc
Confidence 1122 56677774 6563 4578887764 343333 221110
Q ss_pred -----ceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCC-eEEecc-CC-C---CeEEEEecC
Q psy15447 314 -----YCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQR-FLVQGH-RD-T---PLKYLYLQK 382 (457)
Q Consensus 314 -----~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~-~~~~~~-~~-~---~~~~i~~~~ 382 (457)
..+...++.+.+|.++..|+.+++ ..++-+++.+++.+.|+. +++ +.+... .. . ..+.+.+..
T Consensus 281 ~~~~~~G~n~rmsel~AAig~~qL~~l~~---~~~~R~~~a~~y~~~L~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~ 354 (438)
T PRK15407 281 YTYSHLGYNLKITDMQAAIGLAQLEKLPG---FIEARKANFAYLKEGLAS---LEDFLILPEATPNSDPSWFGFPITVKE 354 (438)
T ss_pred ccccccccccCccHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhcc---CCCccccCcCCCCCeeEEEEEEEEECC
Confidence 112234788888999888887754 667777888888888877 333 222111 11 1 234455543
Q ss_pred CcchHHHHHHHHHHHHHHHHcCeeEecccc-Ccccc--------C-C---------CCCeEEEEecCCCCHHHHHHHHHH
Q psy15447 383 SDDEVASKKLLQTICDMCIQAGFAITCPSH-LDQEA--------K-K---------QKPSIRITCNISHTEQDMNSLIET 443 (457)
Q Consensus 383 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-~~~~~--------~-~---------~~~~lRi~~~~~~t~edi~~~~~~ 443 (457)
... ....++.+.|.++||..+.... |.... . . ....+-+.++..+|++|+++++++
T Consensus 355 ~~~-----~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~ 429 (438)
T PRK15407 355 DAG-----FTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEK 429 (438)
T ss_pred cCC-----CCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHH
Confidence 210 0346899999999997654321 11100 0 0 133477777777899999999999
Q ss_pred HHHHHH
Q psy15447 444 LCKSHD 449 (457)
Q Consensus 444 l~~~~~ 449 (457)
|+++++
T Consensus 430 i~~~~~ 435 (438)
T PRK15407 430 IEEFFG 435 (438)
T ss_pred HHHHHh
Confidence 998875
No 315
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.87 E-value=1.6e-19 Score=179.28 Aligned_cols=292 Identities=17% Similarity=0.191 Sum_probs=199.4
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHH----HHHHhcCCeEEEec-CCCHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQ----TGLIASRCKVQYFK-HNNMQ 197 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~----~~~~~~g~~~~~~~-~~d~~ 197 (457)
.++...++|+.++++.|.+.+++++||++|+..++.++.++||.|++....|+++. ..+...|.++.+++ .+|++
T Consensus 67 ~~pt~~~le~~la~l~g~~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~e 146 (437)
T PRK05613 67 TNPTVEALENRIASLEGGVHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDPE 146 (437)
T ss_pred cChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCHH
Confidence 46778999999999999999999999999999999988999999999988888764 33456688888886 55788
Q ss_pred HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCC
Q psy15447 198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTE 277 (457)
Q Consensus 198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~ 277 (457)
++++.+.+ ++++|++|++.|++|.+.|+++|.++|+++|+++|+|.+++.|..- . .+ ..
T Consensus 147 ~l~~~l~~-----------~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~~---~------p~-~~ 205 (437)
T PRK05613 147 SWQAAVQP-----------NTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAALV---R------PL-EL 205 (437)
T ss_pred HHHHhCCc-----------cCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCcccccc---C------hH-Hh
Confidence 88887753 4578889999999999999999999999999999999998765431 1 11 13
Q ss_pred CccEEEecCcccccCc----ccEEEecHHH-----------------------------------HHHHHhhCCcceecC
Q psy15447 278 EVDMIIGSLEHALGSV----GGFCVGSSYI-----------------------------------IEHHRLSGSGYCFSA 318 (457)
Q Consensus 278 ~~Di~~~s~sK~lg~~----gG~v~~~~~~-----------------------------------~~~~~~~~~~~~~~~ 318 (457)
++|+++.|++|.+++. ||+++.+... ....+.. .....+.
T Consensus 206 GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~G~ 284 (437)
T PRK05613 206 GADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAG-LLRDTGA 284 (437)
T ss_pred CCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHH-HHHhcCC
Confidence 4599999999999753 5777653220 0000000 1113455
Q ss_pred CCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc---------------CCCCeEEEEecCC
Q psy15447 319 SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH---------------RDTPLKYLYLQKS 383 (457)
Q Consensus 319 ~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~---------------~~~~~~~i~~~~~ 383 (457)
.++|..|+..+..|+-+. .++++..+++..+.+.|++++.+..+..++. ..+.++.+.++.+
T Consensus 285 ~~~p~~a~l~~rgl~TL~---lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~~g~gg~~sf~l~~~ 361 (437)
T PRK05613 285 TLSPFNAWVTAQGLDTLS---LRLERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPWYATKEKLGLKYTGSVLSFDIKGG 361 (437)
T ss_pred CCCHHHHHHHHcccCcHH---HHHHHHHHHHHHHHHHHHcCCCcceEECCCCCCCccHHHHHHhcCCCCceEEEEEecCC
Confidence 689999888877766553 4778889999999999998553332222111 1245778887643
Q ss_pred cchHHHHHHHHHHHHHHHHcCeeEecc------ccCcc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447 384 DDEVASKKLLQTICDMCIQAGFAITCP------SHLDQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLC 445 (457)
Q Consensus 384 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~------~~~~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 445 (457)
. ..+.++++.|.=-.+....+ .+|.. .....++.+|+++.+. +.+.+++-|+
T Consensus 362 ~------~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGlE----~~~dLi~Dl~ 431 (437)
T PRK05613 362 K------DEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQATVRLSVGIE----DIDDIIADLE 431 (437)
T ss_pred H------HHHHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHH
Confidence 2 14556666654211111111 11211 0112256899999864 4555555555
Q ss_pred HHHH
Q psy15447 446 KSHD 449 (457)
Q Consensus 446 ~~~~ 449 (457)
++++
T Consensus 432 ~Al~ 435 (437)
T PRK05613 432 GGFA 435 (437)
T ss_pred HHHh
Confidence 5544
No 316
>KOG1405|consensus
Probab=99.86 E-value=3e-20 Score=168.85 Aligned_cols=349 Identities=14% Similarity=0.155 Sum_probs=225.4
Q ss_pred eecCCCcEEE-ECCeeeEEee---cCCccCCCCChhhHHHHHH-HHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc--C
Q psy15447 67 VDQKSGYIVN-INGIPCINFA---THNYLSFVENPDIEKCAID-CIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM--G 139 (457)
Q Consensus 67 i~~~~g~~~~-~~G~~~id~~---s~~~l~~~~~p~i~~a~~~-~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~--g 139 (457)
-++.-|.|+. +|||.++|.- |.-++|+. ||.+.+++.+ +..+.-+.-..-.. +-..+..+.+.+.|-.+. |
T Consensus 62 YEkS~GNYlvDvDGN~lLDvYsQIsSvplGYn-~P~LvK~a~~p~~~~~lvnRPALg~-fP~kd~~~~l~~~ll~~APKG 139 (484)
T KOG1405|consen 62 YEKSIGNYLVDVDGNRLLDVYSQISSVPLGYN-NPALVKAAQQPQNATMLVNRPALGN-FPPKDFAEKLRQSLLSIAPKG 139 (484)
T ss_pred hhhhcCceEEecCCCeeehhhhhhcccccCCC-CHHHHHHhcChHHHHHHhccccccC-CChhhHHHHHHHHHHhhCcch
Confidence 3467899999 6999999963 45678886 8888777643 22221111100001 112455555666555554 3
Q ss_pred CCcEEEecccHHHHHHHHHhhc------C-------------------CCC----EEEEeCcccHHHHHHHHhcCCeEE-
Q psy15447 140 LEETALYSFGFSTSASAIAAYV------K-------------------RND----AVFVDENINFAIQTGLIASRCKVQ- 189 (457)
Q Consensus 140 ~~~~i~~~sG~~a~~~ai~a~~------~-------------------~gd----~v~~~~~~h~~~~~~~~~~g~~~~- 189 (457)
.+.+...-+|+.||+.|+++.. + ||. ++......|+.++..++....+.+
T Consensus 140 ~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm~n~aPg~P~lsvlsF~gaFHGR~~g~lstT~SKpIH 219 (484)
T KOG1405|consen 140 QKQVITMLCGSCANENAYKTAFIWYRAKERGQAGFSAEELESCMINQAPGAPDLSVLSFKGAFHGRTFGSLSTTHSKPIH 219 (484)
T ss_pred HHHHHHHhccccccHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCCCCceeeeeeccccccccccccccccCcccc
Confidence 5566777899999999987531 1 221 233455567777766554432211
Q ss_pred E-----------------ec------CC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----h
Q psy15447 190 Y-----------------FK------HN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----L 236 (457)
Q Consensus 190 ~-----------------~~------~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l 236 (457)
. +| +| .++++|++|.+.... ..+++++|+||+++.+|.-.. +
T Consensus 220 KldiPaFdWPiA~fP~ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k-----~~pVaaiIvEPIQsEGGDnhaSp~Ff 294 (484)
T KOG1405|consen 220 KLDIPAFDWPIAPFPRYKYPLDENVAENKKEDQGCLAEVEDLIVKYRKK-----KKPVAAIIVEPIQSEGGDNHASPDFF 294 (484)
T ss_pred ccCCCCCCCCCCCCccccCChhhhhhhhhhhhhhHHHHHHHHHHHHhhc-----CCCeEEEEeechhccCCCccCCHHHH
Confidence 1 11 11 366788888776521 246889999999999887632 8
Q ss_pred HHHHHHHHHcCcEEEEEcCcccccccCCCC-ccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcce
Q psy15447 237 KDILSLRSKYQARIFVDESVSFGTLGSTGH-GVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYC 315 (457)
Q Consensus 237 ~~i~~l~~~~g~~li~DEa~~~g~~g~~g~-~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~ 315 (457)
+.|+++|+|||+.+|+||+|..| |.+|. |..++|+++ .-+|++ ||||-|-. |||.-..+ ++.......
T Consensus 295 ~kLrdi~~Kh~v~fivDEVQTGg--GaTGk~WaHehw~l~-~PpD~v--TFSKK~q~-gGffh~~~-----frpn~pYri 363 (484)
T KOG1405|consen 295 RKLRDITKKHGVAFIVDEVQTGG--GATGKFWAHEHWNLD-SPPDVV--TFSKKFQT-GGFFHDEE-----FRPNEPYRI 363 (484)
T ss_pred HHHHHHHHhcCeEEEeeeeecCC--CccCceeeehhcCCC-CCccce--ehhhhhhc-CccccCcc-----cCCCchHHH
Confidence 99999999999999999998643 55565 456999986 456887 89998843 55654332 221111011
Q ss_pred e-cCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccccc-CCeEEeccCCCCeEEEEecCCcchHHHHHHH
Q psy15447 316 F-SASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVT-QRFLVQGHRDTPLKYLYLQKSDDEVASKKLL 393 (457)
Q Consensus 316 ~-~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 393 (457)
| +....|.-.....+.++.++++ .+.++...-++.|.++|.+++.. ++.--..++.+.++.+.++++. ..
T Consensus 364 fNTWmGdP~k~lll~~vv~~I~~~-~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps~~-------~R 435 (484)
T KOG1405|consen 364 FNTWMGDPSKNLLLEEVVQEIKRE-DLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPSGS-------IR 435 (484)
T ss_pred hhhhcCChHHHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCChH-------HH
Confidence 1 1122454444444556666544 58899999999999998775422 2221112345667777777665 66
Q ss_pred HHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 394 QTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 394 ~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
..++..++-+|+-+...+ .-.+|+-|++..++...+-+++.++++++.
T Consensus 436 dk~i~~~~~nGv~~GGCg---------~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 436 DKLILIARLNGVNLGGCG---------DKSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred HHHHHHHHHcCceecccc---------cceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 788999999999775433 357999999999999999999999998764
No 317
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.86 E-value=1.4e-19 Score=192.38 Aligned_cols=306 Identities=12% Similarity=0.094 Sum_probs=214.4
Q ss_pred cccChHHHHHHHHHHHhhcCCCcEEEecccH----HHHHHHHHhhcCC-CC----EEEEeCcccHHHHHHHHhcCCeEEE
Q psy15447 120 FYGTNVVHLDLENDIASFMGLEETALYSFGF----STSASAIAAYVKR-ND----AVFVDENINFAIQTGLIASRCKVQY 190 (457)
Q Consensus 120 ~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~----~a~~~ai~a~~~~-gd----~v~~~~~~h~~~~~~~~~~g~~~~~ 190 (457)
..|..+...++++.|++++|.+.+.|..+++ +|+..+++++.++ || +|+++...|++........|.++..
T Consensus 563 ~~g~~~~~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~ 642 (993)
T PLN02414 563 AQGYQEMFEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVV 642 (993)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEE
Confidence 4566788899999999999998888776655 6888899988765 77 8999999999999888889999988
Q ss_pred ecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCC
Q psy15447 191 FKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTG 265 (457)
Q Consensus 191 ~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g 265 (457)
++.+ |+++|++.++... +++++|++..+++.+|...|+++|.++|+++|+++++|.++..+..+..-
T Consensus 643 v~~d~~G~vDle~L~~~i~~~~--------~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~ 714 (993)
T PLN02414 643 VGTDAKGNINIEELRKAAEAHK--------DNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTS 714 (993)
T ss_pred eccCCCCCcCHHHHHHHHhccC--------CCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCC
Confidence 8763 8999999997533 36789999999999999999999999999999999999999765433211
Q ss_pred CccccccCCCCCCccEEEecCcccccC------cc-cEEEecHHHHHHHHhhC----Ccc----eec--CCCc--HH-HH
Q psy15447 266 HGVTEYFGVSTEEVDMIIGSLEHALGS------VG-GFCVGSSYIIEHHRLSG----SGY----CFS--ASLP--PF-LA 325 (457)
Q Consensus 266 ~~~~~~~~~~~~~~Di~~~s~sK~lg~------~g-G~v~~~~~~~~~~~~~~----~~~----~~~--~~~~--~~-~~ 325 (457)
....++|++++|.+|+|++ +| |+++.++.+...+.... .++ ..+ ++.+ +. .+
T Consensus 715 --------p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~a 786 (993)
T PLN02414 715 --------PGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSA 786 (993)
T ss_pred --------ccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhH
Confidence 1113569999999998852 22 77888887666553110 000 000 1111 22 11
Q ss_pred HHHHHHHHHHhh---C--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCe---EEEEecCCcchHHHHHHHHHHH
Q psy15447 326 VAANKALHLLKA---N--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPL---KYLYLQKSDDEVASKKLLQTIC 397 (457)
Q Consensus 326 aaa~a~l~~~~~---~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~ 397 (457)
..+..++.++.. + .+..++...++.|+++.|++ ..++.+.++ .+++ +.+.+..-.. .......++.
T Consensus 787 l~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~---~~~~~~~~~-~~~~~hEfv~~~~~l~~--~~g~~~~di~ 860 (993)
T PLN02414 787 LILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEG---HYPVLFRGK-NGTCAHEFIIDLRPFKN--TAGIEPEDVA 860 (993)
T ss_pred HHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHh---hCCccccCC-CCCeeeeEEEecccccc--ccCCCHHHHH
Confidence 233344444332 1 23366777899999999977 344444322 2232 1222221000 0001346799
Q ss_pred HHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 398 DMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 398 ~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
++|++.||......+ +..+.+|++|+...|++|||++++++..+.+++.+
T Consensus 861 krL~d~Gihapt~~~------pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 861 KRLMDYGFHAPTMSW------PVPGTLMIEPTESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred HHHHHcCcEEeeecc------ccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999998755443 23689999999999999999999999999988864
No 318
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.86 E-value=4.2e-19 Score=163.29 Aligned_cols=299 Identities=17% Similarity=0.201 Sum_probs=200.9
Q ss_pred CCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeE
Q psy15447 113 GSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKV 188 (457)
Q Consensus 113 ~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~ 188 (457)
++..+|. .++....||+++|.+-|--.++.++||..|+..+|..+.+.||.|+....-|+.+.. .++..|.++
T Consensus 53 G~iYsRi---~NPT~~vlE~RiAaLEGG~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v 129 (426)
T COG2873 53 GNIYTRI---MNPTTDVLEERIAALEGGVAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEV 129 (426)
T ss_pred Cceeeec---cCchHHHHHHHHHHhhcchhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEE
Confidence 3334454 467778999999999998888999999999999999999999999988877766543 356679999
Q ss_pred EEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcc
Q psy15447 189 QYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGV 268 (457)
Q Consensus 189 ~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~ 268 (457)
.+++.+|++.+++.+++ ++++|++|++-||.+.+.++++|.++|+++|+.||+|...+...+-+
T Consensus 130 ~fvd~~d~~~~~~aI~~-----------nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl~r----- 193 (426)
T COG2873 130 RFVDPDDPENFEAAIDE-----------NTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYLCR----- 193 (426)
T ss_pred EEeCCCCHHHHHHHhCc-----------ccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCcceecc-----
Confidence 99999999999999964 67899999999999999999999999999999999999865443321
Q ss_pred ccccCCCCCCccEEEecCcccccC----cccEEEecH--HHH---------------------H---------HHHhhCC
Q psy15447 269 TEYFGVSTEEVDMIIGSLEHALGS----VGGFCVGSS--YII---------------------E---------HHRLSGS 312 (457)
Q Consensus 269 ~~~~~~~~~~~Di~~~s~sK~lg~----~gG~v~~~~--~~~---------------------~---------~~~~~~~ 312 (457)
.++ .++||++.|++|.+|+ .||.++-.. ++. + +.|...
T Consensus 194 ----P~~-hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~- 267 (426)
T COG2873 194 ----PIE-HGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQL- 267 (426)
T ss_pred ----hhh-cCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHH-
Confidence 111 4569999999999974 356654221 111 0 000000
Q ss_pred cceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC---------------CCCeEE
Q psy15447 313 GYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR---------------DTPLKY 377 (457)
Q Consensus 313 ~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~---------------~~~~~~ 377 (457)
-..++.+++|..+...+..++-+ .-+++|..+|+..+.+.|+.++...++...+-. .+.++.
T Consensus 268 lRDlGa~lsPfnAfl~lqGlETL---~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vlt 344 (426)
T COG2873 268 LRDLGATLSPFNAFLLLQGLETL---SLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLT 344 (426)
T ss_pred HHhcccccCcHHHHHHHhchhhh---HHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEE
Confidence 01123445666555554444433 236788889999999999985544444332211 144677
Q ss_pred EEecCCcchHHHHHHHHHHHHHHH------HcC----eeEeccccCcc--------ccCCCCCeEEEEecCCCCHHHHHH
Q psy15447 378 LYLQKSDDEVASKKLLQTICDMCI------QAG----FAITCPSHLDQ--------EAKKQKPSIRITCNISHTEQDMNS 439 (457)
Q Consensus 378 i~~~~~~~~~~~~~~~~~~~~~l~------~~G----i~v~~~~~~~~--------~~~~~~~~lRi~~~~~~t~edi~~ 439 (457)
+.+++..+ ...++++.|. .-| +.+.|..--.. .....++.+|+++.. ||++.
T Consensus 345 F~~kgg~e------a~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI----Ed~~D 414 (426)
T COG2873 345 FGVKGGYE------AGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI----EDIDD 414 (426)
T ss_pred EEecChHH------HHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc----CCHHH
Confidence 77776632 2334444332 112 33333211000 112337789999964 55666
Q ss_pred HHHHHHHHHH
Q psy15447 440 LIETLCKSHD 449 (457)
Q Consensus 440 ~~~~l~~~~~ 449 (457)
++.-|+++++
T Consensus 415 iiaDl~qAl~ 424 (426)
T COG2873 415 IIADLEQALE 424 (426)
T ss_pred HHHHHHHHHh
Confidence 6666666554
No 319
>PLN02271 serine hydroxymethyltransferase
Probab=99.86 E-value=5.6e-19 Score=174.54 Aligned_cols=324 Identities=13% Similarity=0.105 Sum_probs=210.4
Q ss_pred ChhhHHHHHHHH-HhcCCCCCCCCCcccChHHHHHH---H-HHHHhhcCCCc----E-EEecccHHHHHHHHHhhcCCCC
Q psy15447 96 NPDIEKCAIDCI-DKNGVGSCGPRGFYGTNVVHLDL---E-NDIASFMGLEE----T-ALYSFGFSTSASAIAAYVKRND 165 (457)
Q Consensus 96 ~p~i~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l---~-~~la~~~g~~~----~-i~~~sG~~a~~~ai~a~~~~gd 165 (457)
.|.+.++.-..+ .+|..++.+.|.+.|. +...++ + ++..++||.+. + +-.-||+.||.+++.++++|||
T Consensus 161 S~av~~algS~ltnkYaEG~pG~Ryy~G~-~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD 239 (586)
T PLN02271 161 CRAVMEALGSHLTNKYSEGMPGARYYTGN-QYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGD 239 (586)
T ss_pred CHHHHHHhcCcccccCCCCCCCCcCCCCC-hhHHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhcCCCC
Confidence 355666555444 3466677777765554 333333 3 33444778554 2 4456999999999999999999
Q ss_pred EEEEeCcccHHHHHH---------HHhcCCe--EEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447 166 AVFVDENINFAIQTG---------LIASRCK--VQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM 228 (457)
Q Consensus 166 ~v~~~~~~h~~~~~~---------~~~~g~~--~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~ 228 (457)
.|+.-+..|+..... +...|.. ..+|+.+ |.+++++.... .++++|++.+..+
T Consensus 240 ~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~----------~rPKLII~g~Say 309 (586)
T PLN02271 240 RIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALD----------FRPKILICGGSSY 309 (586)
T ss_pred EEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhh----------cCCeEEEECchhc
Confidence 999866665543321 1223432 3343333 78889886544 4567888866554
Q ss_pred CCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEecHH-----
Q psy15447 229 NSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGSSY----- 302 (457)
Q Consensus 229 ~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~~~----- 302 (457)
+ ...|+++++++|+++|++|++|.+|..|.+.. +. +..+-+.+|++++|.+|+| |+.||++..+++
T Consensus 310 p--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~---g~---~~sP~~~aDvvt~TTHKtLrGPrGG~I~~r~~~~~~~ 381 (586)
T PLN02271 310 P--REWDYARFRQIADKCGAVLMCDMAHISGLVAA---KE---CVNPFDYCDIVTSTTHKSLRGPRGGIIFYRKGPKLRK 381 (586)
T ss_pred c--CcCCHHHHHHHHHHcCCEEEEECccccccccc---Cc---CCCCCcCCcEEEeCCcccCCCCCceEEEecccccccc
Confidence 4 56789999999999999999999999887642 11 1111135799999999999 778888877653
Q ss_pred ---------------HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh--hCcHHHHHHHHHHHHHHHHhhcccccCCe
Q psy15447 303 ---------------IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK--ANPSLLTKLREKCNTMHSLLSQHKVTQRF 365 (457)
Q Consensus 303 ---------------~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~--~~~~~~~~l~~~~~~l~~~L~~~~~~~~~ 365 (457)
+.+.+...-.+ .+.++.+....|+...+++... +..+..+++.+|++.|.+.|.+ .|+
T Consensus 382 ~g~~gs~s~~~~~~d~~~kI~~aVfP-glqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~----~G~ 456 (586)
T PLN02271 382 QGMLLSHGDDNSHYDFEEKINFAVFP-SLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLR----RKC 456 (586)
T ss_pred cCCccccccccccHHHHHHhhcccCC-ccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH----CCC
Confidence 33444333333 2222323333344444555432 2245788899999999999998 788
Q ss_pred EEecc-CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecC----CCCHHHHHHH
Q psy15447 366 LVQGH-RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNI----SHTEQDMNSL 440 (457)
Q Consensus 366 ~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~----~~t~edi~~~ 440 (457)
+++.. .+++++++.+.... .....+.+.|.+.||.+....-|....+..++.+||..+. ...++|++++
T Consensus 457 ~vv~ggTdnHlvLvDl~~~g------~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~i 530 (586)
T PLN02271 457 RLVTGGTDNHLLLWDLTTLG------LTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETI 530 (586)
T ss_pred eEeeCCCCcceeeecCcccC------CCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHH
Confidence 87643 45677877764321 0233455566667999876555533333346789998654 3567999999
Q ss_pred HHHHHHHHH
Q psy15447 441 IETLCKSHD 449 (457)
Q Consensus 441 ~~~l~~~~~ 449 (457)
.+.|.++++
T Consensus 531 A~~i~~~~~ 539 (586)
T PLN02271 531 ADFLLRAAQ 539 (586)
T ss_pred HHHHHHHHh
Confidence 999988876
No 320
>KOG0634|consensus
Probab=99.85 E-value=1.9e-18 Score=161.85 Aligned_cols=306 Identities=13% Similarity=0.114 Sum_probs=206.6
Q ss_pred EEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCcc
Q psy15447 143 TALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTK 218 (457)
Q Consensus 143 ~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~ 218 (457)
.+++++.+.+...+++.++.+||.|+++.+.+.+.+..++..|+++++++.+ ++|.|++.+..-.....+.| .+.
T Consensus 127 iiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~k~~-~p~ 205 (472)
T KOG0634|consen 127 IIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKIIPVKMDQDGIDPESLEEILSNWKPGSYKKP-KPH 205 (472)
T ss_pred EEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEEeccccCCCCCHHHHHHHHhcCCcccccCC-CCe
Confidence 3444455589999999999999999999999999999999999999988754 79999999987665433333 345
Q ss_pred EEEEEecCCCCCCCCCCh---HHHHHHHHHcCcEEEEEcCcccccccCC--------C--C--c-----cccccCCCCCC
Q psy15447 219 KFIIVEGVYMNSADICPL---KDILSLRSKYQARIFVDESVSFGTLGST--------G--H--G-----VTEYFGVSTEE 278 (457)
Q Consensus 219 ~~vi~e~v~~~~G~i~~l---~~i~~l~~~~g~~li~DEa~~~g~~g~~--------g--~--~-----~~~~~~~~~~~ 278 (457)
.+..+.+.+||||...++ ++|.+||+||++++|.||.|.+.-++.. . . . .....+.+-++
T Consensus 206 vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdG 285 (472)
T KOG0634|consen 206 VLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDG 285 (472)
T ss_pred EEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccc
Confidence 567788899999999886 5999999999999999999987665520 0 0 0 11223344566
Q ss_pred ccEEEecCccccc--CcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh------CcHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALG--SVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA------NPSLLTKLREKCN 350 (457)
Q Consensus 279 ~Di~~~s~sK~lg--~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~------~~~~~~~l~~~~~ 350 (457)
..|-+.||||-++ .+-||+.+++..++.+-..+...+-+ ++.+......+.++...+ ..+++..+.++..
T Consensus 286 rVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~~ae~~t~~--pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn 363 (472)
T KOG0634|consen 286 RVIRNDSFSKIIAPGLRLGWITGNSLFLKRILDLAEVATSG--PSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRN 363 (472)
T ss_pred cEEeccchhhhhcCcceeEEeecCHHHHHHHhhhcceeecC--cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788999999995 45599999998887765433222222 222322333333332221 1234455556666
Q ss_pred HHHHHhhcccccCCeEEeccCCCCeEEEEecCCc-ch-HHHHHHHHHHHHHHHHcCeeEeccccCccc-cCCCC-CeEEE
Q psy15447 351 TMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD-DE-VASKKLLQTICDMCIQAGFAITCPSHLDQE-AKKQK-PSIRI 426 (457)
Q Consensus 351 ~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~-~~~~~-~~lRi 426 (457)
.+...|.+.-...-+++..+..|.++|+.++-.. +. ..-......+...+.++||.+.++..+.+. ..... -++|+
T Consensus 364 ~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRl 443 (472)
T KOG0634|consen 364 ALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRL 443 (472)
T ss_pred HHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEE
Confidence 6666665521111256666778999999986110 00 000012234566677889999998877663 11212 38999
Q ss_pred EecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 427 TCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 427 ~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+++. ...+++++.++.+..++++--
T Consensus 444 s~a~-a~~e~l~~g~~rf~~~ike~f 468 (472)
T KOG0634|consen 444 SIAF-AEPEKLDEGIERFGSVIKEHF 468 (472)
T ss_pred Eeec-CCHHHHHHHHHHHHHHHHHHh
Confidence 9976 467899999999988887653
No 321
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=1.2e-18 Score=162.20 Aligned_cols=339 Identities=16% Similarity=0.146 Sum_probs=226.2
Q ss_pred eeEEee-cCCccCCCCChhhHHHHHHHH-HhcCCCCCCCCCcccC--hHHHHHHHH-HHHhhcCCCcE-EEecccHHHHH
Q psy15447 81 PCINFA-THNYLSFVENPDIEKCAIDCI-DKNGVGSCGPRGFYGT--NVVHLDLEN-DIASFMGLEET-ALYSFGFSTSA 154 (457)
Q Consensus 81 ~~id~~-s~~~l~~~~~p~i~~a~~~~l-~~~~~~~~~~~~~~g~--~~~~~~l~~-~la~~~g~~~~-i~~~sG~~a~~ 154 (457)
+.|++. |=|+ -+|.+.+|.-..+ .+|.-++.+-|.+.|. -+..+.|+. +..++||.+.+ +--.||+.||.
T Consensus 27 ~~ieLIASEN~----~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~AN~ 102 (413)
T COG0112 27 EHIELIASENF----TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQ 102 (413)
T ss_pred hceeeeecccc----CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchHHHH
Confidence 445553 4343 2588998887777 4688888877775553 233334433 34447898866 55679999999
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHHH---HHHhcCCe--EEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQT---GLIASRCK--VQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIV 223 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~~---~~~~~g~~--~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~ 223 (457)
+++.++.+|||.|+--+..|+..+. .+..+|.. .+.++.+ |.|++++..++.+ +++||.
T Consensus 103 av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~k----------PK~ii~ 172 (413)
T COG0112 103 AVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVK----------PKLIIA 172 (413)
T ss_pred HHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHhC----------CCEEEE
Confidence 9999999999999887766655332 23344432 3333322 7899999988753 356665
Q ss_pred ecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEecH-
Q psy15447 224 EGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGSS- 301 (457)
Q Consensus 224 e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~~- 301 (457)
-. +.--...|+++++++|++.|++|++|-+|-.|..- .| . +.+--| ..|++++|.||+| |+.||.+.+++
T Consensus 173 G~--SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA-~G--~--~p~P~~-~AdvVTtTTHKTlrGPrGG~Il~~~e 244 (413)
T COG0112 173 GG--SAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIA-GG--V--HPNPLP-HADVVTTTTHKTLRGPRGGIILTNDE 244 (413)
T ss_pred Cc--cccccccCHHHHHHHHHHhCceEEehHHHHHHHHh-cc--c--CCCCCC-ccceEeCCcccCCCCCCceEEEeccH
Confidence 31 12234678999999999999999999999766542 11 1 111112 3799999999999 78899999985
Q ss_pred HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEecc-CCCCeEEEE
Q psy15447 302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-RDTPLKYLY 379 (457)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~i~ 379 (457)
++...+...-.+...++...-..++.+.+.-+.++.. .+..+++.+|++.|.+.|.+ .|+.+.+. .+++++.+.
T Consensus 245 el~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~----~G~~vvsGgTdnHl~lVD 320 (413)
T COG0112 245 ELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKE----RGFKVVSGGTDNHLVLVD 320 (413)
T ss_pred HHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHH----cCCeEecCCccceEEEEE
Confidence 7877776544443344333333334444444444433 56788899999999999998 88888643 446778777
Q ss_pred ecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc-ccCCCCCeEEEEecCC----CCHHHHHHHHHHHHHHHHHh
Q psy15447 380 LQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCNIS----HTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-~~~~~~~~lRi~~~~~----~t~edi~~~~~~l~~~~~~~ 451 (457)
+.... . ...+..+.|.+.||.+....-|.. ..+.....+||..+.. ..++|++++.+.|.+++...
T Consensus 321 l~~~~-~-----~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~ 391 (413)
T COG0112 321 LRSKG-L-----TGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGL 391 (413)
T ss_pred cccCC-C-----CHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhcc
Confidence 76321 0 234455566667999876665544 2234467899987644 46789999999998888653
No 322
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.85 E-value=6.9e-19 Score=173.39 Aligned_cols=291 Identities=9% Similarity=0.047 Sum_probs=197.8
Q ss_pred hHHHHHHHHHHHhhcCCC---cEEEec-ccHHHHHHHHHhhcCC-CCEEEEeCcccHHHHHH-H-HhcCC-eEEEecCCC
Q psy15447 124 NVVHLDLENDIASFMGLE---ETALYS-FGFSTSASAIAAYVKR-NDAVFVDENINFAIQTG-L-IASRC-KVQYFKHNN 195 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~---~~i~~~-sG~~a~~~ai~a~~~~-gd~v~~~~~~h~~~~~~-~-~~~g~-~~~~~~~~d 195 (457)
.+...+.++.++++++.+ ++++++ ||+.++..++..+.++ ++.++. ...|++.+.. + +..|. ++..++..+
T Consensus 47 ~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~~ 125 (378)
T PRK03080 47 KALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEADY 125 (378)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccCC
Confidence 577788999999999963 467675 8999999999888774 445555 5677776553 2 34566 666554321
Q ss_pred --HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccC
Q psy15447 196 --MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFG 273 (457)
Q Consensus 196 --~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~ 273 (457)
.-++++ ++ . ++.|.+.++.+.+|.+.|+++|.+ ++||+++++|.++++|... .+
T Consensus 126 g~~~d~~~-i~-----------~-~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~p---------id 181 (378)
T PRK03080 126 GSLPDLSA-VD-----------F-DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALP---------LD 181 (378)
T ss_pred CCCCCHhh-cC-----------C-CCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCC---------CC
Confidence 111222 11 1 235788888899999999999999 8899999999999987542 23
Q ss_pred CCCCCccEEEecCcccccC-cc-cEEEecHHHHHHHHhhCCcc-----------------ee---cCC-CcHHHHHHHHH
Q psy15447 274 VSTEEVDMIIGSLEHALGS-VG-GFCVGSSYIIEHHRLSGSGY-----------------CF---SAS-LPPFLAVAANK 330 (457)
Q Consensus 274 ~~~~~~Di~~~s~sK~lg~-~g-G~v~~~~~~~~~~~~~~~~~-----------------~~---~~~-~~~~~~aaa~a 330 (457)
+ +++|++++|.+|++++ .| |+++.+++.++.+.....++ .+ +.+ .+.....+..+
T Consensus 182 v--~~iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~ 259 (378)
T PRK03080 182 W--SKLDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLD 259 (378)
T ss_pred H--HHCcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHH
Confidence 3 3479999999999964 55 88999998887764321100 01 111 23333344467
Q ss_pred HHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEecc---CCC-CeEEEEecCCcchHHHHHHHHHHHHHHHHc
Q psy15447 331 ALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH---RDT-PLKYLYLQKSDDEVASKKLLQTICDMCIQA 403 (457)
Q Consensus 331 ~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~---~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~ 403 (457)
+++++.+. +.+.++.+++.+++++.|++ ..++.+... ..+ .++.+.+++.. .....++...|.++
T Consensus 260 al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~---~~~~~~~~~~~~~~s~~i~~~~~~~~~-----~~~~~~~~~~l~~~ 331 (378)
T PRK03080 260 QLDWANSIGGLDALIARTAANASVLYDWAEK---TPWATPLVADPATRSNTSVTLDFVDAQ-----AAVDAAAVAKLLRE 331 (378)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh---CCCcccccCCccccCccEEEEEcCCch-----HHHHHHHHHHHHHc
Confidence 88888653 45678888899999999988 344444321 123 46666665410 00223466777788
Q ss_pred CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447 404 GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQP 454 (457)
Q Consensus 404 Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~ 454 (457)
|+.++.+.+. ...+.+|++++..+|++||++++++|+++++.++..
T Consensus 332 ~i~v~~g~~~-----~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~~~ 377 (378)
T PRK03080 332 NGAVDIEPYR-----DAPNGLRIWCGPTVEPADVEALTPWLDWAFERLKAA 377 (378)
T ss_pred CCeecccccc-----CCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 9888765432 124789999999999999999999999998877643
No 323
>PLN03032 serine decarboxylase; Provisional
Probab=99.85 E-value=2.4e-18 Score=166.94 Aligned_cols=310 Identities=9% Similarity=0.014 Sum_probs=207.4
Q ss_pred hhhHHHHHHHHHh-cCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cE--EEecccHHHHHHHHHhhc--CCCCEEEE
Q psy15447 97 PDIEKCAIDCIDK-NGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ET--ALYSFGFSTSASAIAAYV--KRNDAVFV 169 (457)
Q Consensus 97 p~i~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~--i~~~sG~~a~~~ai~a~~--~~gd~v~~ 169 (457)
+...+++.+.+.+ +|.....+.......+...++.+.+++++|.+ .. +|+++|++||..++.+.. .++.+|++
T Consensus 37 ~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~ 116 (374)
T PLN03032 37 YGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYA 116 (374)
T ss_pred hHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEe
Confidence 3455666555542 33322222222245677788889999999864 33 888899999999887654 24568999
Q ss_pred eCcccHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHH
Q psy15447 170 DENINFAIQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS 244 (457)
Q Consensus 170 ~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~ 244 (457)
+...|.+..++++..+..+..++. .|+++|++.+.+.. ..+.+|++...++++|.+.|+++|.++|+
T Consensus 117 s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~~~~--------~~~~lvv~tagtt~tG~idpi~eI~~i~~ 188 (374)
T PLN03032 117 SRESHYSVFKAARMYRMEAVKVPTLPSGEIDYDDLERALAKNR--------DKPAILNVNIGTTVKGAVDDLDRILRILK 188 (374)
T ss_pred CCCceeHHHHHHHHcCCCCeEeeeCCCCcCcHHHHHHHHHHcC--------CCCEEEEEEecCcCCccCCCHHHHHHHHH
Confidence 999999999999988876655543 28999999997532 24567777778889999999999999999
Q ss_pred HcC-----cEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-Ccc-cEEEecHHHHHHHHhhC-----C
Q psy15447 245 KYQ-----ARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVG-GFCVGSSYIIEHHRLSG-----S 312 (457)
Q Consensus 245 ~~g-----~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~g-G~v~~~~~~~~~~~~~~-----~ 312 (457)
+|| +++++|.+++++...-... ...++.. ..+|.+..|.||.+| +.| |+++.++...+.+.... .
T Consensus 189 ~~g~~~~~~~lHvDaA~gg~~~p~~~~--~~~~~~~-~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~~~~~Yl~~~ 265 (374)
T PLN03032 189 ELGYTEDRFYIHCDGALFGLMMPFVSR--APEVTFR-KPIGSVSVSGHKFLGCPMPCGVALTRKKHVKALSQNVEYLNSR 265 (374)
T ss_pred HhCCCCCCeeEEEEccchhhhhhccCC--CcccCCC-cCCcEEEECcccccCCCcCeEEEEEEchhhHhhccCCcccCCC
Confidence 996 5999999998765421100 0112222 357899999999998 444 77777776665442211 1
Q ss_pred cceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHH
Q psy15447 313 GYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASK 390 (457)
Q Consensus 313 ~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 390 (457)
.++..++-+...++..-++|+.+..+ .++.++..++++++.+.|++ .++.+...+...++.+..+...
T Consensus 266 d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~----~~~~~~~~p~~~~V~f~~~~~~------ 335 (374)
T PLN03032 266 DATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTE----AGLTCRLNELSSTVVFERPMDE------ 335 (374)
T ss_pred CCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh----CCCcEEECCCceEEEEcCCCcH------
Confidence 12233333333334444455554332 45678888899999999998 5777766666666655433211
Q ss_pred HHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 391 KLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 391 ~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
. ..+|-.+.+. .+.+++++...+|++.+|++++-|++
T Consensus 336 ----~-----~~~~w~l~~~----------~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 336 ----A-----FIKKWQLACE----------GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred ----h-----Hhheeeeccc----------CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 1 2245444432 25899999888999999999998865
No 324
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.85 E-value=2.2e-18 Score=184.47 Aligned_cols=352 Identities=10% Similarity=0.084 Sum_probs=225.9
Q ss_pred CeeeEEeecCCccCCCCCh-hhHHHHHHHHHhcCCCCC-CCCCcccChHHHHHHHHHHHhhcCCC--c--EEEecccHHH
Q psy15447 79 GIPCINFATHNYLSFVENP-DIEKCAIDCIDKNGVGSC-GPRGFYGTNVVHLDLENDIASFMGLE--E--TALYSFGFST 152 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p-~i~~a~~~~l~~~~~~~~-~~~~~~g~~~~~~~l~~~la~~~g~~--~--~i~~~sG~~a 152 (457)
+.-|+|.++..+ . .| .+.+++.+.+..+...+. .+....-..+..++.++.+++++|.+ + ++|++++++|
T Consensus 34 ~~iYLD~Aatt~---~-~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~a 109 (805)
T PLN02724 34 GVVYLDHAGATL---Y-SESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAA 109 (805)
T ss_pred CCEeEeCCCCCC---C-CHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHH
Confidence 356888776432 1 23 455555455554322222 11111224567889999999999963 3 3566677788
Q ss_pred HHHHHHhh-cCCCCEEEEeCcccHHHHHHHH---hcCCeEEEecCC-----------CH----HHHHHHHHh-hchhccc
Q psy15447 153 SASAIAAY-VKRNDAVFVDENINFAIQTGLI---ASRCKVQYFKHN-----------NM----QHLEELLRQ-QDERDTL 212 (457)
Q Consensus 153 ~~~ai~a~-~~~gd~v~~~~~~h~~~~~~~~---~~g~~~~~~~~~-----------d~----~~le~~l~~-~~~~~~~ 212 (457)
+..+...+ .++||.|++....|.+...... ..|.++.+++.+ ++ +++++.++. ... ..
T Consensus 110 lnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~--~~ 187 (805)
T PLN02724 110 LKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQK--RE 187 (805)
T ss_pred HHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhcc--cc
Confidence 88777776 5789999998888887664432 347777776543 11 334443210 000 00
Q ss_pred CCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc--------CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEe
Q psy15447 213 NSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY--------QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIG 284 (457)
Q Consensus 213 ~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~--------g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~ 284 (457)
...+++++|++.++.|.+|.+.|++.|.++++.. ++++++|.+|+.|... .++...++|+++.
T Consensus 188 ~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~p---------iDv~~~~~Dfl~~ 258 (805)
T PLN02724 188 DDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSP---------PDLSRYPADFVVV 258 (805)
T ss_pred ccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCC---------CChhhcCCCEEEE
Confidence 0124557999999999999999999876665532 3689999999876542 2333346799999
Q ss_pred cCccccc-Ccc-cEEEecHHHHHHHHhhCCcc---------------------ee-cCCCcHHHHHHHHHHHHHHhhC--
Q psy15447 285 SLEHALG-SVG-GFCVGSSYIIEHHRLSGSGY---------------------CF-SASLPPFLAVAANKALHLLKAN-- 338 (457)
Q Consensus 285 s~sK~lg-~~g-G~v~~~~~~~~~~~~~~~~~---------------------~~-~~~~~~~~~aaa~a~l~~~~~~-- 338 (457)
|++|.+| +.| |+++.++++.+.+.....+. .| .++.+....++..++++++.+.
T Consensus 259 S~HK~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~ 338 (805)
T PLN02724 259 SFYKIFGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTI 338 (805)
T ss_pred ecceeccCCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhCh
Confidence 9999998 444 88888887776654321100 01 2345666666777888888763
Q ss_pred cHHHHHHHHHHHHHHHHhhcccc---cCCeEEeccC--------CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeE
Q psy15447 339 PSLLTKLREKCNTMHSLLSQHKV---TQRFLVQGHR--------DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAI 407 (457)
Q Consensus 339 ~~~~~~l~~~~~~l~~~L~~~~~---~~~~~~~~~~--------~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v 407 (457)
+...++.+++.+++.+.|+++.. .+++.+.++. .++++.+.+.+..... .....+...+.++||.+
T Consensus 339 ~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~---v~~~~v~~l~~~~gI~v 415 (805)
T PLN02724 339 SAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSW---VGHREVEKLASLSGIQL 415 (805)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCE---eCHHHHHHHHHhcCcEE
Confidence 45678899999999999988321 1146665432 4678888776532100 01223444445679999
Q ss_pred eccccCccc---c---------------------------CCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 408 TCPSHLDQE---A---------------------------KKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 408 ~~~~~~~~~---~---------------------------~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
+.+.+|... . ....+.+|+|+...+|.+|||+++++|++..
T Consensus 416 R~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 416 RTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred eeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHh
Confidence 998887641 0 0123789999999999999999999999865
No 325
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.84 E-value=1.5e-19 Score=172.22 Aligned_cols=219 Identities=14% Similarity=0.119 Sum_probs=156.1
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEec-ccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEec---------
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYS-FGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFK--------- 192 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~-sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~--------- 192 (457)
......++++.+|+++|.+.+++++ ++++++..++.+++++||.|++++++|.+...++...|.++.+++
T Consensus 57 ~~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~~~ 136 (294)
T cd00615 57 PTGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNPYYGI 136 (294)
T ss_pred CChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCcccCc
Confidence 4566789999999999998888755 456889999999999999999999999999999999998877653
Q ss_pred --CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCccccc-ccCCCCccc
Q psy15447 193 --HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGT-LGSTGHGVT 269 (457)
Q Consensus 193 --~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~-~g~~g~~~~ 269 (457)
..|++++++.+++. ++++++++.++ +++|.+.|+++|.++|++||+++|+||+|+... ++......
T Consensus 137 ~~~i~~~~l~~~l~~~---------~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~- 205 (294)
T cd00615 137 AGGIPPETFKKALIEH---------PDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSS- 205 (294)
T ss_pred CCCCCHHHHHHHHHhC---------CCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcc-
Confidence 24789999988652 23455555555 578999999999999999999999999987432 21111110
Q ss_pred cccCCCCCCccEEEecCcccccC-c-ccEEEecHHHH--HHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHH
Q psy15447 270 EYFGVSTEEVDMIIGSLEHALGS-V-GGFCVGSSYII--EHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTK 344 (457)
Q Consensus 270 ~~~~~~~~~~Di~~~s~sK~lg~-~-gG~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~ 344 (457)
....++|+++.|++|++++ . ||++..+++.. +.+.... ....+++++....++..++++++.+ ..+++++
T Consensus 206 ----~~~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~-~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~ 280 (294)
T cd00615 206 ----AAMAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEAL-NLHQSTSPSYLILASLDVARAMMALEGKELVEE 280 (294)
T ss_pred ----hhhcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHH-HHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 1113569999999999964 2 45554443321 2222111 1122344555666666677776643 3567888
Q ss_pred HHHHHHHHHHHhh
Q psy15447 345 LREKCNTMHSLLS 357 (457)
Q Consensus 345 l~~~~~~l~~~L~ 357 (457)
+.++.+++++.|+
T Consensus 281 ~~~~~~~~r~~l~ 293 (294)
T cd00615 281 LIELALYARQEIN 293 (294)
T ss_pred HHHHHHHHHHHHh
Confidence 8899999988775
No 326
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.83 E-value=2.2e-18 Score=168.33 Aligned_cols=243 Identities=14% Similarity=0.140 Sum_probs=175.8
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHH----HHHHhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQ----TGLIASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~----~~~~~~g~~~~~~~~~d~~~ 198 (457)
.++...+||++++++.|.+.++.++||+.|+..++.++.++||.|++....|+.+. ..+...|.++..++.++.+.
T Consensus 62 ~~P~~~~lE~~la~leg~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~~ 141 (384)
T PRK06434 62 GNPTVQAFEEKYAVLENAEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLNS 141 (384)
T ss_pred CChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChhh
Confidence 46778999999999999999999999999999999999999999998776555444 44556788888887765555
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
++ +.. +++++|++|.+.|+++.+.|+++|.++|++++ +++|.+++.+..++ . .+ ..
T Consensus 142 ~~--l~~----------~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~~~---p----l~---~g 197 (384)
T PRK06434 142 LD--FDP----------SNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYNQN---P----LD---LG 197 (384)
T ss_pred ee--ecC----------CCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcccCC---c----hh---cC
Confidence 54 221 35789999999999999999999999999999 46699975433221 1 11 24
Q ss_pred ccEEEecCcccccC----cccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGS----VGGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 279 ~Di~~~s~sK~lg~----~gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~ 353 (457)
.|+++.|.+|.+++ .||++++ ++++.+.++... ..++..++|+.++.++..|+.+. .++++.++++..+.
T Consensus 198 aDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~--~~~G~~~~~~~A~l~~~gL~tL~---~R~~r~~~~a~~~a 272 (384)
T PRK06434 198 ADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERR--KTLGSNPDPIQAYLALRGLKTLG---LRMEKHNKNGMELA 272 (384)
T ss_pred CCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHH--HhcCCCCCHHHHHHHHhCCCcHH---HHHHHHHHHHHHHH
Confidence 58999999999964 2677766 455656554321 13455678888887777766553 47888899999999
Q ss_pred HHhhcccccCCeEEec--------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHH
Q psy15447 354 SLLSQHKVTQRFLVQG--------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCI 401 (457)
Q Consensus 354 ~~L~~~~~~~~~~~~~--------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~ 401 (457)
+.|++++.+..+..++ ...+.++.+.+++.. .+.++.+.|.
T Consensus 273 ~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~~~-------~~~~f~~~l~ 321 (384)
T PRK06434 273 RFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRSME-------DVHKFIRNLE 321 (384)
T ss_pred HHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECCHH-------HHHHHHHhCC
Confidence 9999854332222211 123678888886422 4455666554
No 327
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.82 E-value=1.1e-17 Score=166.18 Aligned_cols=313 Identities=14% Similarity=0.115 Sum_probs=198.2
Q ss_pred ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccH
Q psy15447 96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINF 175 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~ 175 (457)
++++.+++.+.++.|+....... .....+.+..+++.+++++|.+.+++++||+.|+..++.+ ..+||.|++.+..|.
T Consensus 94 ~~~vieAv~~~~~~y~~l~~~l~-~g~~g~r~~~le~~lA~l~gae~alvv~sg~aAi~l~l~~-l~~GdeVIvs~~e~v 171 (454)
T TIGR00474 94 AEEAIEAVTDAARGYSNLEYDLE-TGKRGSRYSHVEGLLCELTGAEDALVVNNNAAAVLLALNT-LAKGKEVIVSRGELV 171 (454)
T ss_pred CHHHHHHHHHHHhcccchhcccc-ccccchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHH-hCCcCEEEECCChhh
Confidence 68899999999987652111000 0112355789999999999999999999999999888854 688999999887653
Q ss_pred ------HHHHHHHhcCCeEEEecC---CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC--CC--CCCChHHHHHH
Q psy15447 176 ------AIQTGLIASRCKVQYFKH---NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN--SA--DICPLKDILSL 242 (457)
Q Consensus 176 ------~~~~~~~~~g~~~~~~~~---~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~--~G--~i~~l~~i~~l 242 (457)
.+...++..|.++..+++ .+++++++++. +++++|++++..|+ .| .+.|+++|.++
T Consensus 172 ~~ggs~~i~~~~~~~G~~~~~v~~~~~~~l~dle~aI~-----------~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~l 240 (454)
T TIGR00474 172 EIGGSFRIPDVMEQSGAKLVEVGTTNRTHLKDYEDAIT-----------ENTALLLKVHTSNYRIVGFTEEVSIAELVAL 240 (454)
T ss_pred hhcchhhHHHHHHHcCCEEEEeCCCCCCCHHHHHHhcC-----------cCCEEEEEEccCcccccCCCCCCCHHHHHHH
Confidence 233456778999999876 46777777764 35678888887775 46 57899999999
Q ss_pred HHHcCcEEEEEcCcccccccCCCC-cccc---ccCCCCCCccEEEecCcccccC-cccEEEecHHHHHHHHhhCCccee-
Q psy15447 243 RSKYQARIFVDESVSFGTLGSTGH-GVTE---YFGVSTEEVDMIIGSLEHALGS-VGGFCVGSSYIIEHHRLSGSGYCF- 316 (457)
Q Consensus 243 ~~~~g~~li~DEa~~~g~~g~~g~-~~~~---~~~~~~~~~Di~~~s~sK~lg~-~gG~v~~~~~~~~~~~~~~~~~~~- 316 (457)
|++||+++++|.+ .|.++..+. ++.. .......++|+++.|.+|++|+ .+|+++++++.++.++.....-..
T Consensus 241 a~~~g~~vivD~~--sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~~~~i~~l~~~~l~r~lr 318 (454)
T TIGR00474 241 GREHGLPVMEDLG--SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGKKELIERLKKNPLTRALR 318 (454)
T ss_pred HHHcCCeEEEECC--CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEECHHHHHhhhhchhHHHHh
Confidence 9999999999974 455544321 1110 0111124679999999999964 579999999888766432210000
Q ss_pred -------------cCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCe--EEeccC----C-----
Q psy15447 317 -------------SASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRF--LVQGHR----D----- 372 (457)
Q Consensus 317 -------------~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~--~~~~~~----~----- 372 (457)
...+.|..+...+..++.+. ...+++++++..+.+.|++... +++ ++.... +
T Consensus 319 ~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~---~~~~~~~~~A~~la~~L~~~~~-~~~~~~~~~~~~~~ggg~~p~ 394 (454)
T TIGR00474 319 VDKLTLAALEATLRLYLDPEKALEKIPTLRMLT---QSPEELRARAERLAKRLKAALG-PGFELEIVPGLSQVGGGSLPD 394 (454)
T ss_pred hChHHHHHHHHHHHHHhCchhhhhhchHHHHhc---cCHHHHHHHHHHHHHHHHhhcc-CCceEEEEEcCCcccCCCCcC
Confidence 00112222222222222222 1345677788888888866200 222 332211 0
Q ss_pred --CCeEEEEecCCcchHHHHHHHHHHHHHHHHcC--eeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447 373 --TPLKYLYLQKSDDEVASKKLLQTICDMCIQAG--FAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL 444 (457)
Q Consensus 373 --~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~G--i~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l 444 (457)
-+-+.+.+.... ..+.++.+.|++.. |+.+.. .+.+.+-+ -++.++|++.+++++
T Consensus 395 ~~l~~~~v~~~~~~------~~~~~l~~~lr~~~~~ii~r~~----------~~~~~ld~-r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 395 ERLPSYAVTLTPDG------LSAEKLEARLRELPPPIIGRIE----------DDRFLLDL-RTLLEDEEELLIEAL 453 (454)
T ss_pred CCCCeEEEEEecCC------CCHHHHHHHHhcCCCCEEEEEE----------CCEEEEEe-CcCCHHHHHHHHHHh
Confidence 133444443221 14567888888654 555421 35677766 346889999988876
No 328
>PRK15029 arginine decarboxylase; Provisional
Probab=99.82 E-value=1.1e-17 Score=173.37 Aligned_cols=311 Identities=14% Similarity=0.139 Sum_probs=199.3
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccH-HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC--------
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGF-STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------- 194 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------- 194 (457)
.....+.++..|+++|.++++|.++|+ .+|.+++.+++++||.|++++.+|-+...++.++|+..+++...
T Consensus 204 ~G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi~~ 283 (755)
T PRK15029 204 TGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGIIG 283 (755)
T ss_pred CcHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCcc
Confidence 456678889999999999999988887 57888999999999999999999999999999999988876421
Q ss_pred --C-----HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCccc-ccccCCCC
Q psy15447 195 --N-----MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSF-GTLGSTGH 266 (457)
Q Consensus 195 --d-----~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~-g~~g~~g~ 266 (457)
+ ++.+++.++++........+...+++++.|-+ .|.+.++++|.++|+++|+.|++||||+. ..+.+
T Consensus 284 ~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY--~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~--- 358 (755)
T PRK15029 284 PIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY--DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNP--- 358 (755)
T ss_pred CCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC--cceeeCHHHHHHHHHhcCCeEEEECccccccccCc---
Confidence 3 88999999875421100111112455555544 59999999999999999999999999963 22222
Q ss_pred ccccccCC-----CCCCcc-EEEecCcccccC--cccEEEecHH--HH--HHHHhhCCcceecCCCcHHHHHHHHHHHHH
Q psy15447 267 GVTEYFGV-----STEEVD-MIIGSLEHALGS--VGGFCVGSSY--II--EHHRLSGSGYCFSASLPPFLAVAANKALHL 334 (457)
Q Consensus 267 ~~~~~~~~-----~~~~~D-i~~~s~sK~lg~--~gG~v~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~ 334 (457)
.+..+..+ ...++| +++.|.||.+++ .++++-.+.. .+ +.++.. .....|+|++.+.+|..-.+.++
T Consensus 359 ~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~-l~~~qSTSPSY~LmASLD~ar~~ 437 (755)
T PRK15029 359 IYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQA-YMMHATTSPLYAICASNDVAVSM 437 (755)
T ss_pred cccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHH-HHHHcCCCcHHHHHHHHHHHHHH
Confidence 11111222 114567 999999999964 2344432211 11 222211 11223445555555555566666
Q ss_pred Hhh--CcHHHHHHHHHHHHHHHHhhcccccC---C------------------------------------eEEecc--C
Q psy15447 335 LKA--NPSLLTKLREKCNTMHSLLSQHKVTQ---R------------------------------------FLVQGH--R 371 (457)
Q Consensus 335 ~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~---~------------------------------------~~~~~~--~ 371 (457)
++. ..++.++..+....+++.++++.... + +.+..+ .
T Consensus 438 m~~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (755)
T PRK15029 438 MDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGES 517 (755)
T ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccccccchhhhccccceeeeccccc
Confidence 764 45677788888888988887632100 0 111110 0
Q ss_pred --C-----------CCe-EEEEecC-Ccch--HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCH
Q psy15447 372 --D-----------TPL-KYLYLQK-SDDE--VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTE 434 (457)
Q Consensus 372 --~-----------~~~-~~i~~~~-~~~~--~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ 434 (457)
+ -|+ +.+.... +... ...+.-+..+.+.|.++||.+-... ...+-+.++...|+
T Consensus 518 ~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~~---------~~~vL~l~s~g~t~ 588 (755)
T PRK15029 518 WHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTT---------DFQIMFLFSMGVTR 588 (755)
T ss_pred ccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEecC---------CCeEEEEeCCCCCH
Confidence 0 011 1111111 1100 0011123468888888899987544 35677788888999
Q ss_pred HHHHHHHHHHHHHHH
Q psy15447 435 QDMNSLIETLCKSHD 449 (457)
Q Consensus 435 edi~~~~~~l~~~~~ 449 (457)
+++++++++|.++.+
T Consensus 589 ~~~~~L~~aL~~~~~ 603 (755)
T PRK15029 589 GKWGTLVNTLCSFKR 603 (755)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998754
No 329
>KOG1549|consensus
Probab=99.82 E-value=6.7e-18 Score=160.29 Aligned_cols=337 Identities=16% Similarity=0.208 Sum_probs=205.8
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccC--hHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGT--NVVHLDLENDIASFMGLE--ETALYSFGFSTSASA 156 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~--~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~a 156 (457)
-|+|..+..+ -+|+|.+|+.+.+..+- +...++ .||. .+..++.++.+|++.+.+ +++|++++++++..+
T Consensus 45 vyld~~at~p----~~~~Vldam~~~~~~~~-~nPh~~-~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlv 118 (428)
T KOG1549|consen 45 VYLDNQATGP----MDPRVLDAMLPYLLEYL-GNPHSR-SYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLV 118 (428)
T ss_pred EEEecCcCCC----CCHHHHHHHHHHHHHhh-cCCCcc-ccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHH
Confidence 4566555433 36899999999887743 222233 2443 344788899999999955 467777888999999
Q ss_pred HHhhc-CCCC----EEEEeCcccHHHHHHHH---hcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447 157 IAAYV-KRND----AVFVDENINFAIQTGLI---ASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIV 223 (457)
Q Consensus 157 i~a~~-~~gd----~v~~~~~~h~~~~~~~~---~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~ 223 (457)
++.+. ..+| +|+.-...|.+...+++ -.|..+..+|.+ |.+.+++.|+ +++++|.+
T Consensus 119 l~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~-----------~~T~lv~I 187 (428)
T KOG1549|consen 119 LKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIR-----------SKTRLVSI 187 (428)
T ss_pred HHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcC-----------CCceEEEE
Confidence 88753 2344 89999999998776654 446777766654 4566666664 47799999
Q ss_pred ecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHH
Q psy15447 224 EGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSY 302 (457)
Q Consensus 224 e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~ 302 (457)
.+++|+.|.+.|+++|.++|+++|+.+++|.+|+.|... .++...++|++..+.||++|++| |++..++.
T Consensus 188 ~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~---------vDV~eln~D~~s~s~HK~ygp~~iGaLYvr~~ 258 (428)
T KOG1549|consen 188 MHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIP---------VDVQELNADFLSISAHKIYGPPGIGALYVRRK 258 (428)
T ss_pred EecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCcc---------ccHHHcCchheeeecccccCCCcceEEEEccC
Confidence 999999999999999999999999999999999976542 34444567999999999999875 88777751
Q ss_pred HHHHHHh----hCCc---ceecCCCcHHHHHHHHHHHHHHhhCcHH-HHHHHHHHHHHHHHhhcccccCCeEEeccCCC-
Q psy15447 303 IIEHHRL----SGSG---YCFSASLPPFLAVAANKALHLLKANPSL-LTKLREKCNTMHSLLSQHKVTQRFLVQGHRDT- 373 (457)
Q Consensus 303 ~~~~~~~----~~~~---~~~~~~~~~~~~aaa~a~l~~~~~~~~~-~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~- 373 (457)
...++. .+.+ -..+++.....+...-++.++..+.... ...+.++...+...+... .+.+.+.+++..
T Consensus 259 -~~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~~~~~ll~~i~~~--~~~~~~~G~~~~~ 335 (428)
T KOG1549|consen 259 -RPRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKRLSEKLLMGIGQS--LPEVTLNGSGKSR 335 (428)
T ss_pred -CCcccccCcccCCccccccccCCcCchhhhhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHhhh--CchhhccCCcccc
Confidence 111110 0000 0112333344434444555555443212 233334455554444220 123323222211
Q ss_pred --CeEEEEec--CCcchHHHHHHHHHHHHHHHHcCeeEeccc-cCcc-------ccCCCCCeEEEEecCCCCHHHHHHHH
Q psy15447 374 --PLKYLYLQ--KSDDEVASKKLLQTICDMCIQAGFAITCPS-HLDQ-------EAKKQKPSIRITCNISHTEQDMNSLI 441 (457)
Q Consensus 374 --~~~~i~~~--~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-~~~~-------~~~~~~~~lRi~~~~~~t~edi~~~~ 441 (457)
.+..+-+. .+.. ...+..+..+..|..+.... .|.. .......++||++...+|++|+++++
T Consensus 336 ~~~~~~~~~~~~~g~~------~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~ 409 (428)
T KOG1549|consen 336 YPGLVSLSFPYVEGES------LLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLV 409 (428)
T ss_pred cccceeeecccccCcc------hhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHH
Confidence 11222222 1110 11122222222333332221 0100 01123578999999999999999999
Q ss_pred HHHHHHHHHhc
Q psy15447 442 ETLCKSHDIAV 452 (457)
Q Consensus 442 ~~l~~~~~~~~ 452 (457)
+.+.+..+...
T Consensus 410 ~~i~~~v~~~~ 420 (428)
T KOG1549|consen 410 DAIKKLVSLLR 420 (428)
T ss_pred HHHHHHHHhcc
Confidence 99998877654
No 330
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.82 E-value=7.6e-18 Score=162.58 Aligned_cols=319 Identities=15% Similarity=0.122 Sum_probs=189.0
Q ss_pred ChhhHHHHHHHHH-hcCCCCCCCCCcccChHHHHH---H-HHHHHhhcCCC----cE-EEecccHHHHHHHHHhhcCCCC
Q psy15447 96 NPDIEKCAIDCID-KNGVGSCGPRGFYGTNVVHLD---L-ENDIASFMGLE----ET-ALYSFGFSTSASAIAAYVKRND 165 (457)
Q Consensus 96 ~p~i~~a~~~~l~-~~~~~~~~~~~~~g~~~~~~~---l-~~~la~~~g~~----~~-i~~~sG~~a~~~ai~a~~~~gd 165 (457)
+|.+.++....+. +|..++.+.|.+.| .+...+ | .+++.++|+.+ .+ +-..||+.|+..++.+++++||
T Consensus 33 Sp~v~~al~S~l~nkyaeg~pg~ryy~G-~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~pGD 111 (399)
T PF00464_consen 33 SPAVREALGSDLTNKYAEGYPGKRYYGG-CEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALLKPGD 111 (399)
T ss_dssp -HHHHHHHTSGGGGS-TTEETTEESSSS-THHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT-TT-
T ss_pred CHHHHHHhCCcceeeccccCCCcccccC-cchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHHhhcC
Confidence 4777776655553 45445555555444 344444 3 34455588887 55 4557999999999999999999
Q ss_pred EEEEeCcccHHHHH-HH---------HhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447 166 AVFVDENINFAIQT-GL---------IASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN 229 (457)
Q Consensus 166 ~v~~~~~~h~~~~~-~~---------~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~ 229 (457)
.|+.-...|+.... +. .....+...++.+ |.+++++.+++.. +++|++.....
T Consensus 112 ~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~k----------PklIi~G~S~y- 180 (399)
T PF00464_consen 112 TIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHK----------PKLIICGASSY- 180 (399)
T ss_dssp EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH------------SEEEEE-SST-
T ss_pred cEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcC----------CCEEEECchhc-
Confidence 99887666554331 11 1111234444322 8999999998754 35777754332
Q ss_pred CCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEec--------
Q psy15447 230 SADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGS-------- 300 (457)
Q Consensus 230 ~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~-------- 300 (457)
-...|+++++++|++.|++|++|-+|-.|..-. |. +..- + ..+|++++|.+|+| |+.||++.++
T Consensus 181 -~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~-g~-~~~P--~--~~ADvvt~sThKtl~GPrggiI~~~~~~~~~~~ 253 (399)
T PF00464_consen 181 -PRPIDFKRFREIADEVGAYLMADISHIAGLIAG-GL-FPNP--F--PYADVVTGSTHKTLRGPRGGIILTNKGSKNVDK 253 (399)
T ss_dssp -SS---HHHHHHHHHHTT-EEEEE-TTTHHHHHT-TS-S--G--C--CTSSEEEEESSGGG-SSS-EEEEES-SEEEE-T
T ss_pred -cCccCHHHHHHHHHhcCcEEEecccccccceeh-he-ecCc--c--ccceEEEeeccccccccCceEEEEcCCccccCC
Confidence 234678999999999999999999997775521 11 1111 2 23699999999999 7889999988
Q ss_pred ------HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH-hh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-C
Q psy15447 301 ------SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL-KA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-R 371 (457)
Q Consensus 301 ------~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~-~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~ 371 (457)
+++.+.+...-.+...++ .+....|+...++... .. ..+..+++.+|++.|.+.|.+ .|+++... .
T Consensus 254 ~~~~~~~~l~~~I~~avfP~~qg~-~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~----~G~~v~~ggT 328 (399)
T PF00464_consen 254 KGKEIDEELAEKIDSAVFPGLQGG-PHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQE----RGFKVVTGGT 328 (399)
T ss_dssp TS-EEEHHHHHHHHHHHTTTT-SS---HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH----TT-EEGGGS-
T ss_pred cccccHHHHHHHhccccCCCcccC-cchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhh----CCcEEEECCC
Confidence 788888876544433333 2333333333334333 21 246788999999999999999 89988643 5
Q ss_pred CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEec----CCCCHHHHHHHHHHH
Q psy15447 372 DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCN----ISHTEQDMNSLIETL 444 (457)
Q Consensus 372 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~----~~~t~edi~~~~~~l 444 (457)
+++++++.+.... .......+.|.+.||.+.....|....+.....+||..+ ....++|++++.+.|
T Consensus 329 d~H~vlvd~~~~~------~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~I 399 (399)
T PF00464_consen 329 DNHQVLVDLRSFG------IDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAELI 399 (399)
T ss_dssp SSSEEEEEGGGGT------S-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHHH
T ss_pred CCCeEEEEecccc------cchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhhC
Confidence 6788888876421 034566777888899997655543322333578999875 345778888876643
No 331
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.82 E-value=5.3e-18 Score=165.75 Aligned_cols=307 Identities=11% Similarity=0.047 Sum_probs=199.2
Q ss_pred ChhhHHHHHHHHHhcCCCCCCCCCccc-----ChHHHHHHHHHHHhhcCCC---cEEEecc-cHHHHHHHHHhhcC---C
Q psy15447 96 NPDIEKCAIDCIDKNGVGSCGPRGFYG-----TNVVHLDLENDIASFMGLE---ETALYSF-GFSTSASAIAAYVK---R 163 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g-----~~~~~~~l~~~la~~~g~~---~~i~~~s-G~~a~~~ai~a~~~---~ 163 (457)
++.|.+|+.+.+..++ .........+ ..+...+.++.++++++.+ .++|+++ |++++..++..+.. +
T Consensus 11 p~~V~~a~~~~~~~~~-~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~ 89 (355)
T cd00611 11 PEEVLEQAQKELLDFN-GLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDKGT 89 (355)
T ss_pred CHHHHHHHHHHHhhcc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCe
Confidence 5789999999887765 2221111111 1267788999999999952 4666655 89999999988876 5
Q ss_pred CCEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChH
Q psy15447 164 NDAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLK 237 (457)
Q Consensus 164 gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~ 237 (457)
++.|+.-...|.+ ..-.+..|.++..++.+ +..++++.. .. +++++|.+.+..+.+|.+.+
T Consensus 90 ~~~i~~g~~~~~~-~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~--~~--------~~~~lV~~~h~~t~tG~~~~-- 156 (355)
T cd00611 90 ADYVVTGAWSAKA-AKEAKRYGGVVVIVAAKEEGKYTKIPDVETWD--LA--------PDAAYVHYCSNETIHGVEFD-- 156 (355)
T ss_pred EEEEECCHHHHHH-HHHHHhcCCCcEEEecccccCCCCCCCHhhcC--CC--------CCCCEEEEeCCcccccEEcc--
Confidence 5666553333333 23335557776666542 212222111 11 35678889898888999733
Q ss_pred HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhhCCcc--
Q psy15447 238 DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLSGSGY-- 314 (457)
Q Consensus 238 ~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~~~~~-- 314 (457)
++++.||+++++|.++++|.. .++.+..|+.+.|.+|++|+.| |+++.++++.+.+......+
T Consensus 157 ---~i~~~~g~~~~VDa~qs~g~~-----------~idv~~~~~~~ss~~K~lGP~G~g~l~~~~~~~~~~~~~~~~~~~ 222 (355)
T cd00611 157 ---EVPDTGGVPLVADMSSNILSR-----------PIDVSKFGVIYAGAQKNLGPAGVTVVIVRKDLLGKARKITPSMLN 222 (355)
T ss_pred ---eecccCCCeEEEEccccccCC-----------CCCHHHhCEEEeecccccCCCceEEEEECHHHHhhcccCCCCccc
Confidence 566679999999999998754 2323334566667899999876 88899988877653311100
Q ss_pred --------eecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCeE-Eecc--CCC-CeEEEE
Q psy15447 315 --------CFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRFL-VQGH--RDT-PLKYLY 379 (457)
Q Consensus 315 --------~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~-~~~~--~~~-~~~~i~ 379 (457)
...+++|....++..++++++.+. +.+.++.+++.+++++.|++ ++|+. ...+ ..+ .++.+.
T Consensus 223 ~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~---~~gl~~~~~~~~~rs~~vvsf~ 299 (355)
T cd00611 223 YKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDN---SNGFYRGPVDKRARSRMNVPFR 299 (355)
T ss_pred HHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh---CccccccCCCHHHcCceEEEEE
Confidence 001234555566667889988653 45678888999999999998 44642 1111 123 346666
Q ss_pred ecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 380 LQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
+++.. ...++.+.+.++|+.+.+.. ...+.+|+++...+|++|||+++++|+++
T Consensus 300 ~~~~~-------l~~~~~~~~~r~G~~~~~~~-------~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 300 LGKEE-------LEKEFLKEAEAAGMIGLKGH-------RSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred cCChh-------hhHHHHHHHHHCCCcccCCC-------cccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 55421 22455567778999743332 12368999999999999999999999985
No 332
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.82 E-value=2e-17 Score=163.00 Aligned_cols=305 Identities=13% Similarity=0.133 Sum_probs=196.8
Q ss_pred hHHHHHHHHHHHhhcCCC---cEEEecccH-HHHHHHHHhhcC---CCCEEEEeCcccHHHHHHHHhcCCeEEEecC---
Q psy15447 124 NVVHLDLENDIASFMGLE---ETALYSFGF-STSASAIAAYVK---RNDAVFVDENINFAIQTGLIASRCKVQYFKH--- 193 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~---~~i~~~sG~-~a~~~ai~a~~~---~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--- 193 (457)
..+..++++.+++++|.+ .++++++|+ .++..++.++.. ++|.|+++...|.+..+++...|.+++.++.
T Consensus 104 ~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d 183 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLD 183 (444)
T ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeec
Confidence 566788999999999987 688899999 688878777653 5899999999999999999999998887762
Q ss_pred -----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcc
Q psy15447 194 -----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGV 268 (457)
Q Consensus 194 -----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~ 268 (457)
.|++++++.|.+.. +..+.+|+..+.+...|...|+++|.++|++||+++|+|++|+.+..- ....
T Consensus 184 ~~~~~iD~e~Le~aIt~~~-------~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~--~~~~ 254 (444)
T TIGR03531 184 GDELTTDVEDIERAIEEIG-------PDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNK--YMEL 254 (444)
T ss_pred CcCCCcCHHHHHHHHHhcc-------CCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChh--hhhh
Confidence 27999999997532 134455666655555678899999999999999999999999853211 0000
Q ss_pred ccccCCCCCCccEEEecCcccccCc--ccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH-hhCcHHHHH
Q psy15447 269 TEYFGVSTEEVDMIIGSLEHALGSV--GGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL-KANPSLLTK 344 (457)
Q Consensus 269 ~~~~~~~~~~~Di~~~s~sK~lg~~--gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~-~~~~~~~~~ 344 (457)
. ..+.....+|+++.|++|.+..+ ||+++. ++++++.++..... .....+ ...+....+.+- +...+++++
T Consensus 255 ~-~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~y~g---~~~~s~-~~~~~~~ll~~G~~g~~~li~~ 329 (444)
T TIGR03531 255 I-NKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISKSYPG---RASASP-SLDVLITLLSLGSKGYLELLKE 329 (444)
T ss_pred h-hccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHHhccC---CCCChH-HHHHHHHHHHhCHHHHHHHHHH
Confidence 0 01221113589999999999753 455545 67777777643211 111122 222222222211 222457777
Q ss_pred HHHHHHHHHHHhhcccccCCeEEeccCCCCeE-EEEecCCcchHHHHHHHHHHHHHHHHcCeeE----eccc--------
Q psy15447 345 LREKCNTMHSLLSQHKVTQRFLVQGHRDTPLK-YLYLQKSDDEVASKKLLQTICDMCIQAGFAI----TCPS-------- 411 (457)
Q Consensus 345 l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v----~~~~-------- 411 (457)
..++.+++.+.|+++....|..+...+..++- .+.+..-. ..+...+...|..++|-- .+..
T Consensus 330 ~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~-----~~~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~~~ 404 (444)
T TIGR03531 330 RKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK-----GKDPTMLGSMLYSRRVTGPRVVTNGDSKTVGGCE 404 (444)
T ss_pred HHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc-----ccCHHHHHHHHHhCCCCCceeecCCCceEECCEE
Confidence 88888899888887543455555533344432 22232110 013556777887776532 1111
Q ss_pred ---cCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 412 ---HLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 412 ---~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
|.+.....+.+++-+.....+|++|||.+++.|+++
T Consensus 405 ~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 405 FKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred eecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 000000112346777777889999999999999875
No 333
>PRK04311 selenocysteine synthase; Provisional
Probab=99.81 E-value=2.7e-17 Score=163.86 Aligned_cols=318 Identities=12% Similarity=0.097 Sum_probs=202.4
Q ss_pred ChhhHHHHHHHHHhcCCCCCCCCCc-ccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCccc
Q psy15447 96 NPDIEKCAIDCIDKNGVGSCGPRGF-YGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENIN 174 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~~~~~~~-~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h 174 (457)
++++.+++.+.+..|.... +... ....+.+..+++.+++++|.+.+++++||+.|+..++.+ ..+||.|++.+..|
T Consensus 99 ~~~v~eav~~~~~~~~~le--~~l~~g~~g~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~-l~~GdeVIvs~~e~ 175 (464)
T PRK04311 99 SEAAIEAVTEAARGYSNLE--YDLATGKRGSRDRALAALLCALTGAEDALVVNNNAAAVLLALNA-LAAGKEVIVSRGEL 175 (464)
T ss_pred CHHHHHHHHHHHhcccccc--cchhhcccchHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHH-hCCCCEEEEcchhh
Confidence 5788999988887654211 0110 012355678999999999999999999999999988865 47899999887654
Q ss_pred HH------HHHHHHhcCCeEEEecCC---CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC--CC--CCCChHHHHH
Q psy15447 175 FA------IQTGLIASRCKVQYFKHN---NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN--SA--DICPLKDILS 241 (457)
Q Consensus 175 ~~------~~~~~~~~g~~~~~~~~~---d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~--~G--~i~~l~~i~~ 241 (457)
.. ....+...|+++..++.+ +++++++++. +++++|+++++.|+ +| ...|+++|.+
T Consensus 176 ~~~ggs~~i~~~~~~~G~~l~~v~~~~~t~~~dle~aI~-----------~~TklV~~vh~sN~~i~G~~~~~dl~eI~~ 244 (464)
T PRK04311 176 VEIGGAFRIPDVMRQAGARLVEVGTTNRTHLRDYEQAIN-----------ENTALLLKVHTSNYRIEGFTKEVSLAELAA 244 (464)
T ss_pred hhcCcchhhHHHHHHCCcEEEEECCCCCCCHHHHHHhcC-----------ccCeEEEEEcCCCccccccCCcCCHHHHHH
Confidence 42 233466789998888763 5777777774 34678888888875 34 5789999999
Q ss_pred HHHHcCcEEEEEcCcccccccCCCC-ccccc---cCCCCCCccEEEecCccccc-CcccEEEecHHHHHHHHhhCCccee
Q psy15447 242 LRSKYQARIFVDESVSFGTLGSTGH-GVTEY---FGVSTEEVDMIIGSLEHALG-SVGGFCVGSSYIIEHHRLSGSGYCF 316 (457)
Q Consensus 242 l~~~~g~~li~DEa~~~g~~g~~g~-~~~~~---~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~~~~~~~~~~~~~~~~~ 316 (457)
+|++||+++|+|.+. |.++..+. ++... ......++|+++.|.+|++| +.+|++++++++++.++.....-..
T Consensus 245 lak~~gi~vivD~gs--G~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~~~li~~l~~~~~~r~l 322 (464)
T PRK04311 245 LGKEHGLPVVYDLGS--GSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGKKELIARLKKHPLKRAL 322 (464)
T ss_pred HHHHcCCeEEEECCC--cccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEcHHHHHHHhhchhHHHH
Confidence 999999999999953 33432211 00000 11011467999999999996 4579999999998877632211111
Q ss_pred cCCCcHHHHHHHHHHHHHHh-h------------CcHHHHHHHHHHHHHHHHhhcccccCC--eEEecc----C------
Q psy15447 317 SASLPPFLAVAANKALHLLK-A------------NPSLLTKLREKCNTMHSLLSQHKVTQR--FLVQGH----R------ 371 (457)
Q Consensus 317 ~~~~~~~~~aaa~a~l~~~~-~------------~~~~~~~l~~~~~~l~~~L~~~~~~~~--~~~~~~----~------ 371 (457)
...-...++..+++.... . .....++++++++.+.+.|+.... .+ +++... +
T Consensus 323 --r~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~-~~~~~~~~~~~~~~gggs~p~ 399 (464)
T PRK04311 323 --RVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALG-AAFAVEVVPSFSQVGGGSLPV 399 (464)
T ss_pred --hcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccC-CCeeEEEEEccCccCCCCCcC
Confidence 112222233333333111 0 112346777888888888876210 12 233321 0
Q ss_pred -CCCeEEEEecCCcchHHHHHHHHHHHHHHHHc--CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 372 -DTPLKYLYLQKSDDEVASKKLLQTICDMCIQA--GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 372 -~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~--Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
.-|-+.+.+.... ....++.+.|++- .|+.+.. .+.+.+-+ -+..++|++.+++++++++
T Consensus 400 ~~~~~~~v~~~~~~------~~~~~l~~~lr~~~~~i~~r~~----------~~~~~ld~-r~~~~~~~~~~~~~~~~~~ 462 (464)
T PRK04311 400 DRLPSAAVTLTPKD------RSLEALAARLRLLPPPVIGRIE----------DGRLLLDL-RTLEEEDEERLAAALLEAL 462 (464)
T ss_pred CCCCeEEEEEeCCC------CCHHHHHHHHhcCCCCEEEEEE----------CCEEEEEe-CcCCHHHHHHHHHHHHHHh
Confidence 0134444444321 1456788888864 4655421 36677766 4478999999999998875
Q ss_pred H
Q psy15447 449 D 449 (457)
Q Consensus 449 ~ 449 (457)
.
T Consensus 463 ~ 463 (464)
T PRK04311 463 N 463 (464)
T ss_pred h
Confidence 3
No 334
>KOG0256|consensus
Probab=99.81 E-value=2.3e-17 Score=153.30 Aligned_cols=299 Identities=13% Similarity=0.114 Sum_probs=205.0
Q ss_pred CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHh-cCCeEEEecCC-------CHHHHHHHHHhhchhcc
Q psy15447 140 LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIA-SRCKVQYFKHN-------NMQHLEELLRQQDERDT 211 (457)
Q Consensus 140 ~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~-~g~~~~~~~~~-------d~~~le~~l~~~~~~~~ 211 (457)
.++.+++++++.|++.....++.|||..+++.|+|++...-++. .|.+++++... +.+++|.++.+....
T Consensus 146 P~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~-- 223 (471)
T KOG0256|consen 146 PERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKL-- 223 (471)
T ss_pred ccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHh--
Confidence 45778888899999999999999999999999999887655443 36677665432 578899888776532
Q ss_pred cCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCC-cccccc---CCCCCCccEEEe
Q psy15447 212 LNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGH-GVTEYF---GVSTEEVDMIIG 284 (457)
Q Consensus 212 ~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~-~~~~~~---~~~~~~~Di~~~ 284 (457)
..+++-+++.+++||-|++.+ |..+.+.+.++++-+|+||+|+..+++..+. ...+.. ...++.+ -++.
T Consensus 224 ---~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rv-Hivy 299 (471)
T KOG0256|consen 224 ---GLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRV-HIVY 299 (471)
T ss_pred ---CCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcE-EEEE
Confidence 356777888889999999987 6677788889999999999999888876532 122221 1245555 3467
Q ss_pred cCcccccCcc---cEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcc
Q psy15447 285 SLEHALGSVG---GFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQH 359 (457)
Q Consensus 285 s~sK~lg~~g---G~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~ 359 (457)
|+||-||.+| |.+.. +++++...+... .+..-.+.....++..+---+..++ .++..+|++++.+++.++|++
T Consensus 300 slSKD~GlpGfRvGviYS~ne~VvsaA~kms-sf~~vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~- 377 (471)
T KOG0256|consen 300 SLSKDFGLPGFRVGVIYSNNEDVVSAATKMS-SFGLVSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKA- 377 (471)
T ss_pred EeccccCCCceEEEEEEecChHHHHHHHHHh-hccCCcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHh-
Confidence 9999999888 77765 566666665432 1211111122222222222122221 145678899999999999999
Q ss_pred cccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHH
Q psy15447 360 KVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMN 438 (457)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~ 438 (457)
.|+++.....|.++|+.+..-..... ...-.++.+++.++ ++.++|+..+.. ..++++|+++.. +.++.++
T Consensus 378 ---lgI~cl~s~AGlF~wvDlr~lL~s~t-fe~El~Lw~~i~~~vklnlSpG~s~~C---~EpGWFRvcFAn-~~~~t~~ 449 (471)
T KOG0256|consen 378 ---LGIPCLKSNAGLFCWVDLRKLLTSLT-FEGELELWERILDNVKLNLSPGSSCHC---HEPGWFRVCFAN-MSEETLE 449 (471)
T ss_pred ---cCCceeecCCeeEEEEEhHHhcCcCC-hHHHHHHHHHHHHhhccccCCCCccee---cCCCeEEEEecc-CCHHHHH
Confidence 88998877778888887654221100 01223577777777 999998876543 346899999854 5666666
Q ss_pred HHHHHHHHHHHHhcCC
Q psy15447 439 SLIETLCKSHDIAVQP 454 (457)
Q Consensus 439 ~~~~~l~~~~~~~~~~ 454 (457)
-+++.|+..+..-.++
T Consensus 450 ~am~Ri~~~~~~~~~~ 465 (471)
T KOG0256|consen 450 VAMRRLKQFLDSQVQP 465 (471)
T ss_pred HHHHHHHHHHHhhhcc
Confidence 6899998887754444
No 335
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.81 E-value=2.6e-17 Score=159.78 Aligned_cols=308 Identities=8% Similarity=0.038 Sum_probs=203.7
Q ss_pred hhhHHHHHHHHHhcCCCCCCCCC-cccCh---HHHHHHHHHHHhhcCCC---cEEEec-ccHHHHHHHHHhhcCCCCEEE
Q psy15447 97 PDIEKCAIDCIDKNGVGSCGPRG-FYGTN---VVHLDLENDIASFMGLE---ETALYS-FGFSTSASAIAAYVKRNDAVF 168 (457)
Q Consensus 97 p~i~~a~~~~l~~~~~~~~~~~~-~~g~~---~~~~~l~~~la~~~g~~---~~i~~~-sG~~a~~~ai~a~~~~gd~v~ 168 (457)
..+.+++.+.+..+.....+... ..-.. +...++++.|.++++.+ .+++++ ||+.|+++++..+.+++|.++
T Consensus 5 ~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l 84 (349)
T TIGR01364 5 EEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVAD 84 (349)
T ss_pred HHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEE
Confidence 47888998888866521111111 11123 67788899999999852 466664 599999999999988887544
Q ss_pred E-eCcccHH-HHHHHHhcCCeEEEec------CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHH
Q psy15447 169 V-DENINFA-IQTGLIASRCKVQYFK------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDIL 240 (457)
Q Consensus 169 ~-~~~~h~~-~~~~~~~~g~~~~~~~------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~ 240 (457)
+ ..+.++. ...-++..|. +..+. ..++.++++.... ++.++|.+.+.-+.+|...|
T Consensus 85 ~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~v~~th~ETstGv~~~----- 148 (349)
T TIGR01364 85 YIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEIS----------EDAAYVHYCANETIHGVEFR----- 148 (349)
T ss_pred EEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcCCC----------CCCCEEEEcCCCCcccEecc-----
Confidence 3 3443333 2333445565 43322 3333333322211 24568888888888999876
Q ss_pred HHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhhCC-------
Q psy15447 241 SLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLSGS------- 312 (457)
Q Consensus 241 ~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~~~------- 312 (457)
++++.+++++++|.++++|.. .++.++.|+++.|.+|++|++| |+++.++++++.+.....
T Consensus 149 ~l~~~~~~l~iVDavss~g~~-----------~id~~~~d~~~~ssqK~lgP~Glg~l~~s~~~~~~~~~~~~~~~~~~~ 217 (349)
T TIGR01364 149 ELPDVKNAPLVADMSSNILSR-----------PIDVSKFGLIYAGAQKNIGPAGLTVVIVRKDLLGRASRITPSMLNYKI 217 (349)
T ss_pred eecccCCCeEEEEccccccCc-----------cCCHHHccEEEEecccccCCCceEEEEECHHHHhhcccCCCCcchHHH
Confidence 777889999999999987643 2333455799999999999876 889999988876532111
Q ss_pred ----cceecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEecc---CCC-CeEEEEec
Q psy15447 313 ----GYCFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH---RDT-PLKYLYLQ 381 (457)
Q Consensus 313 ----~~~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~---~~~-~~~~i~~~ 381 (457)
...+ +++|-....+..++|+++.+. +.+.++.+++.+++++.|++ ++|+..... ..+ .++.+.++
T Consensus 218 ~~~~~~~~-~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~---~~gl~~~~~~~~~rs~~v~sf~~~ 293 (349)
T TIGR01364 218 HAENDSMY-NTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDN---SNGFYRNPVDPRNRSRMNVVFTLG 293 (349)
T ss_pred HHhcCCCC-CCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh---CCCeeccCCCHHHcCCeEEEEecC
Confidence 1111 234555556666889887653 46778888999999999999 445533311 123 44666655
Q ss_pred CCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 382 KSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
+.. ...++.+.+.++|+++.+... ..+.+|+++...+|++|||+++++|+++.+
T Consensus 294 ~~~-------~~~~~~~~~~~~Gi~~~~~~~-------~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 294 NEE-------LEKRFLKEAEERGLVSLKGHR-------SVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred Chh-------HhHHHHHHHHHCCCcccCCcc-------ccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 431 234676788889995554432 136899999999999999999999998764
No 336
>PLN02880 tyrosine decarboxylase
Probab=99.81 E-value=4.1e-17 Score=164.64 Aligned_cols=310 Identities=15% Similarity=0.111 Sum_probs=198.6
Q ss_pred ChHHHHHHHHHHHhhcCCCc---------EEEecccHHHHHHHHHhhcC-----------CCCEEEEeCcccHHHHHHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEE---------TALYSFGFSTSASAIAAYVK-----------RNDAVFVDENINFAIQTGLI 182 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~---------~i~~~sG~~a~~~ai~a~~~-----------~gd~v~~~~~~h~~~~~~~~ 182 (457)
..+...++-+.+++++|.+. .+++++|++||..++.+... +.-.|++++..|.++.+++.
T Consensus 120 ~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~ 199 (490)
T PLN02880 120 ATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQ 199 (490)
T ss_pred cHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHH
Confidence 45666677777888888653 47788899999988865432 12256678889999999999
Q ss_pred hcCCe---EEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEE
Q psy15447 183 ASRCK---VQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFV 252 (457)
Q Consensus 183 ~~g~~---~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~ 252 (457)
+.|.. ++.++. .|+++|++.|++.... ...+.+|+..-...++|.+.|+++|.++|++||+|+++
T Consensus 200 ~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~-----g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHV 274 (490)
T PLN02880 200 IAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSS-----GLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHV 274 (490)
T ss_pred HcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHC-----CCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEE
Confidence 99863 344332 3789999999765421 13345666666667899999999999999999999999
Q ss_pred EcCcccccccC-CCCccccccCCCCCCccEEEecCcccccCc--ccEEEecH--HHHHHHHhhCCcceec------CCCc
Q psy15447 253 DESVSFGTLGS-TGHGVTEYFGVSTEEVDMIIGSLEHALGSV--GGFCVGSS--YIIEHHRLSGSGYCFS------ASLP 321 (457)
Q Consensus 253 DEa~~~g~~g~-~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~--gG~v~~~~--~~~~~~~~~~~~~~~~------~~~~ 321 (457)
|.+|+.+.+-. ..+. ...|+ ..+|.++.++||+++.+ .|++..++ .+.+.+.. ...|... ...+
T Consensus 275 DaA~gg~~~~~~~~~~--~l~gi--e~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~-~~~Yl~~~~~~~~~~~~ 349 (490)
T PLN02880 275 DAAYAGSACICPEYRH--YIDGV--EEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLST-NPEFLKNKASQANSVVD 349 (490)
T ss_pred ehhhHHHHHhCHHHHH--HhcCc--hhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHcc-CHHHhcCccccccCCCC
Confidence 99998764321 0000 11333 35699999999999643 36655543 22222211 1111100 0000
Q ss_pred H----------HHHHHHHHHHHHHhhCcHHHHHHH---HHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-H
Q psy15447 322 P----------FLAVAANKALHLLKANPSLLTKLR---EKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-V 387 (457)
Q Consensus 322 ~----------~~~aaa~a~l~~~~~~~~~~~~l~---~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~ 387 (457)
+ ..+...-.+++.+.. +...++++ ++++++.+.|++ .+++++..++...++.+.+...... +
T Consensus 350 ~~~~~i~~~rr~~alklw~~l~~~G~-~g~~~~i~~~~~lA~~~~~~l~~---~~~~el~~~~~~~iv~Fr~~~~~~~~~ 425 (490)
T PLN02880 350 YKDWQIPLGRRFRSLKLWMVLRLYGV-ENLQSYIRNHIKLAKEFEQLVAQ---DSRFEVVTPRIFSLVCFRLVPPKNNED 425 (490)
T ss_pred hhccCcCCCCcccHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHHHHHhc---CCCEEEecCCceEEEEEEEeCCCCChh
Confidence 0 001111122443322 23444454 899999999987 5789988777788888887642111 1
Q ss_pred HHHHHHHHHHHHHHHcC-eeEeccccCccccCCCCCeEEEEecCCCC-HHHHHHHHHHHHHHHHHhc
Q psy15447 388 ASKKLLQTICDMCIQAG-FAITCPSHLDQEAKKQKPSIRITCNISHT-EQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 388 ~~~~~~~~~~~~l~~~G-i~v~~~~~~~~~~~~~~~~lRi~~~~~~t-~edi~~~~~~l~~~~~~~~ 452 (457)
.......++.++|.+.| +++.... ..+..++|+++....| ++|++.+++.|.++.+++.
T Consensus 426 ~~~~~n~~l~~~l~~~g~~~v~~t~------~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~ 486 (490)
T PLN02880 426 NGNKLNHDLLDAVNSSGKIFISHTV------LSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLL 486 (490)
T ss_pred hHHHHHHHHHHHHHhCCCEEEEEEE------ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11224456778888775 4444433 2345689999866655 5999999999999887764
No 337
>PLN02590 probable tyrosine decarboxylase
Probab=99.81 E-value=1.3e-16 Score=161.15 Aligned_cols=310 Identities=13% Similarity=0.106 Sum_probs=203.1
Q ss_pred ChHHHHHHHHHHHhhcCCCc---------EEEecccHHHHHHHHHhhcC-----------CCCEEEEeCcccHHHHHHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEE---------TALYSFGFSTSASAIAAYVK-----------RNDAVFVDENINFAIQTGLI 182 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~---------~i~~~sG~~a~~~ai~a~~~-----------~gd~v~~~~~~h~~~~~~~~ 182 (457)
..+...++-+.|++++|.+. .+++++|++||..++.+... +.-+|.+++..|.++.++++
T Consensus 168 ~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ 247 (539)
T PLN02590 168 ATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACL 247 (539)
T ss_pred hHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHH
Confidence 35566666777777787553 47788999999988866432 12255668889999999999
Q ss_pred hcCC---eEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEE
Q psy15447 183 ASRC---KVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFV 252 (457)
Q Consensus 183 ~~g~---~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~ 252 (457)
+.|. .++.++. .|+++|++.|++.... ...+.+|+..-...++|.+.|+++|.++|++||+||++
T Consensus 248 ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~-----g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHV 322 (539)
T PLN02590 248 IGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAK-----GFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHV 322 (539)
T ss_pred HcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhc-----CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEE
Confidence 9886 3444432 3799999999764321 13345666666666799999999999999999999999
Q ss_pred EcCcccccc-cCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecH--HHHHHHH-------hhC---------
Q psy15447 253 DESVSFGTL-GSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSS--YIIEHHR-------LSG--------- 311 (457)
Q Consensus 253 DEa~~~g~~-g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~--~~~~~~~-------~~~--------- 311 (457)
|.|++...+ .+..+.+ ..|+ +.+|.+....||++.. ..|+++.++ .+.+.+. ...
T Consensus 323 DaA~GG~al~~~~~r~~--~~Gi--e~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~ 398 (539)
T PLN02590 323 DAAYAGNACICPEYRKF--IDGI--ENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNY 398 (539)
T ss_pred ecchhhhhhcChhhHHH--hcCC--ccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCc
Confidence 999975542 2111111 2354 4679999999999964 335555543 2222221 100
Q ss_pred CcceecCC--CcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-
Q psy15447 312 SGYCFSAS--LPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE- 386 (457)
Q Consensus 312 ~~~~~~~~--~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~- 386 (457)
..+....+ ...+... .+|+.+.. ..+..++..+++++|.+.|++ .+++++..++..+++.+.+......
T Consensus 399 ~d~~i~lsRr~raLklW---~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~---~~~fel~~~~~l~iVcFr~~~~~~~~ 472 (539)
T PLN02590 399 KDWQISLSRRFRSLKLW---MVLRLYGSENLRNFIRDHVNLAKHFEDYVAQ---DPSFEVVTTRYFSLVCFRLAPVDGDE 472 (539)
T ss_pred cccCCCCCCchHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCeEEecCCceEEEEEEecCCCCCH
Confidence 00011111 1222223 33443322 235677777899999999988 5789998777788888887643211
Q ss_pred HHHHHHHHHHHHHHHHcCee-EeccccCccccCCCCCeEEEEe-cCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 387 VASKKLLQTICDMCIQAGFA-ITCPSHLDQEAKKQKPSIRITC-NISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 387 ~~~~~~~~~~~~~l~~~Gi~-v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
+.......++.+++.+.|.. +.+.. ..+..++|+++ +..+|++||+.+++.|.+...++..
T Consensus 473 ~~~~~ln~~l~~~l~~~G~~~vs~t~------~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~~ 535 (539)
T PLN02590 473 DQCNERNRELLAAVNSTGKIFISHTA------LSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFTR 535 (539)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeeE------ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 11223566788888888754 44332 23356899998 5556789999999999998777654
No 338
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.81 E-value=5.7e-18 Score=164.13 Aligned_cols=289 Identities=17% Similarity=0.143 Sum_probs=178.3
Q ss_pred cChHHHHHHHHHHHhhcCCCcEEEecccH-HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC------
Q psy15447 122 GTNVVHLDLENDIASFMGLEETALYSFGF-STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN------ 194 (457)
Q Consensus 122 g~~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------ 194 (457)
-......+.++.+|+.+|.++++|.++|+ .+|.+++.+++++||.|++++.+|-++..++.++|+.+++++..
T Consensus 63 ~p~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi 142 (417)
T PF01276_consen 63 DPEGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGI 142 (417)
T ss_dssp TTBTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-
T ss_pred CCccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccccCC
Confidence 35667889999999999999999998888 68999999999999999999999999999999999988765432
Q ss_pred ----CH-----HHHHHHHHhhchhcccCCCCccE---EEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCccccccc
Q psy15447 195 ----NM-----QHLEELLRQQDERDTLNSKVTKK---FIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLG 262 (457)
Q Consensus 195 ----d~-----~~le~~l~~~~~~~~~~~~~~~~---~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g 262 (457)
++ +.+++.|++.. ..++ ++++.|-+ .|.+.++++|.++|+++++.|++||||+.- ++
T Consensus 143 ~~~i~~~~~~~~~i~~~l~~~p--------~~k~~~~vvlt~PTY--~Gv~~di~~I~~~~h~~~~~llvDEAhGah-~~ 211 (417)
T PF01276_consen 143 IGGISPDEFNEEDIEEALKEHP--------DAKAPRLVVLTSPTY--YGVCYDIKEIAEICHKHGIPLLVDEAHGAH-FG 211 (417)
T ss_dssp BEEB-GGGGSHHHHHHHHHHCT--------TCHCESEEEEESS-T--TSEEE-HHHHHHHHCCTECEEEEE-TT-TT-GG
T ss_pred ccCCChhhhhHHHHHHHHHhCc--------cccCceEEEEeCCCC--CeEEECHHHHHHHhcccCCEEEEEcccccc-cc
Confidence 34 88999998754 2233 55555544 599999999999999999999999998632 11
Q ss_pred CCCCccccccCCCCCCcc-------EEEecCcccccC--cccEEEecHHH---HHHHHhhCCcceecCCCcHHHHHHHHH
Q psy15447 263 STGHGVTEYFGVSTEEVD-------MIIGSLEHALGS--VGGFCVGSSYI---IEHHRLSGSGYCFSASLPPFLAVAANK 330 (457)
Q Consensus 263 ~~g~~~~~~~~~~~~~~D-------i~~~s~sK~lg~--~gG~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~aaa~a 330 (457)
-. .+.. +....+.| +++.|.||.+++ .++++-.+..- .+.++.. .....|+|++.+.+|..-.
T Consensus 212 F~--~lp~--~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~-l~~~~TTSPSY~lmASlD~ 286 (417)
T PF01276_consen 212 FH--PLPR--SALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEA-LSMHQTTSPSYPLMASLDV 286 (417)
T ss_dssp CS--GGGT--TCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHH-HHHHS-SS--HHHHHHHHH
T ss_pred CC--CCcc--chhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHH-HHHHcCCChHHHHHHHHHH
Confidence 11 1110 01113445 999999999974 34555443321 2333221 1122345556666566656
Q ss_pred HHHHH-h-hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC----C------------------------Ce-EEEE
Q psy15447 331 ALHLL-K-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD----T------------------------PL-KYLY 379 (457)
Q Consensus 331 ~l~~~-~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~----~------------------------~~-~~i~ 379 (457)
+.+++ . +..++.++..+++..+++.|+++..+.++.+..+.. . |+ +.+.
T Consensus 287 a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~K~ti~ 366 (417)
T PF01276_consen 287 ARAQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYMLDPTKLTIN 366 (417)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE-TTEEEEE
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhcccCccccCCcEEEEE
Confidence 67777 2 235678888889999999994333255555543210 0 11 1222
Q ss_pred ecCC-cc--hHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447 380 LQKS-DD--EVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQ 435 (457)
Q Consensus 380 ~~~~-~~--~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e 435 (457)
++.- .. .......+..+.+.|+++||.+.... .+.+-+.++...|++
T Consensus 367 ~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~d---------~~~vL~l~t~G~t~~ 416 (417)
T PF01276_consen 367 TPGIDADGELSELGIPGYIVEKYLREHGIQVEKTD---------LYNVLFLFTIGDTKE 416 (417)
T ss_dssp -STBETTSSB-SS---HHHHHHHHHHTTEE-SEEE---------SSEEEEE--TTS-HH
T ss_pred ccCcCcCCcccccCCCHHHHHHHHHHcCCEEEecc---------CccEEEEecCCCCCC
Confidence 2100 00 01122356678899999999886543 245666666666654
No 339
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.81 E-value=7.8e-18 Score=164.56 Aligned_cols=287 Identities=11% Similarity=0.047 Sum_probs=186.8
Q ss_pred hHHHHHHHHHHHhhcCCC---cEEEe-cccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhc---CCeEEEecCCCH
Q psy15447 124 NVVHLDLENDIASFMGLE---ETALY-SFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIAS---RCKVQYFKHNNM 196 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~---~~i~~-~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~---g~~~~~~~~~d~ 196 (457)
.+...+.++.++++++.+ .++|+ +||+.++..++..+..+ +.+.+..+.|+..+...... ..++..++...-
T Consensus 40 ~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~ 118 (361)
T TIGR01366 40 KNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPG 118 (361)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEEecCHHHHHHHHHHHhhhccCCceEEecCCC
Confidence 577788999999999963 35565 56899999999887643 33344445555433322211 123444432211
Q ss_pred HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC
Q psy15447 197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST 276 (457)
Q Consensus 197 ~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~ 276 (457)
+.++..+ .+++++|.+.+..+.+|.+.|+++| ++++|+++++|.++++|.. .++.
T Consensus 119 ~~~~~~~-----------~~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~-----------~idv 173 (361)
T TIGR01366 119 SAPEPQA-----------DPGVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDATSGAGGL-----------PVDI 173 (361)
T ss_pred CCCCCcc-----------CCCCCEEEEcccCCccceecccccc---cccCCCeEEEEcCccccCC-----------CCCH
Confidence 2222111 1467899999999999999999887 5899999999999997643 2223
Q ss_pred CCccEEEecCcccccCcccE--EEecHHHHHHHHhhCCc------ce------------ecCC-CcHHHHHHHHHHHHHH
Q psy15447 277 EEVDMIIGSLEHALGSVGGF--CVGSSYIIEHHRLSGSG------YC------------FSAS-LPPFLAVAANKALHLL 335 (457)
Q Consensus 277 ~~~Di~~~s~sK~lg~~gG~--v~~~~~~~~~~~~~~~~------~~------------~~~~-~~~~~~aaa~a~l~~~ 335 (457)
+++|+++.|.+|++|+++|. ++.++++++.+.....+ +. .+.+ ++.....+..++++++
T Consensus 174 ~~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l 253 (361)
T TIGR01366 174 AETDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWM 253 (361)
T ss_pred HHCCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHH
Confidence 34799999999999877653 45578777665421100 10 1112 2333344566788888
Q ss_pred hhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEecc-C--CCCeE-EEEecCCcchHHHHHHHHHHHHHHHHcCeeEe
Q psy15447 336 KAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-R--DTPLK-YLYLQKSDDEVASKKLLQTICDMCIQAGFAIT 408 (457)
Q Consensus 336 ~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~--~~~~~-~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~ 408 (457)
.+. +...++.+++.+++++.|++. .++..... . .++.+ .+.+.++. ...++.+.|.++||.+.
T Consensus 254 ~~~gg~e~~~~r~~~l~~~l~~~l~~~---~~~~~~~~~~~~~s~~v~~v~~~~g~-------~~~~v~~~L~~~gI~i~ 323 (361)
T TIGR01366 254 NGNGGLDWAVARTADSSSRLYSWAQER---PYATPFVTDPGKRSQVVGTIDFVDDI-------DAATVAKILRANGIVDT 323 (361)
T ss_pred HHccCHHHHHHHHHHHHHHHHHHHHhC---CCcccCCCChhhcccceEEEECCCcc-------CHHHHHHHHHHCCCeec
Confidence 654 345688889999999999882 33333211 1 13332 23333333 45678899999999886
Q ss_pred ccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 409 CPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 409 ~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+... ....+.+|++....+|++|+++++++|+++++++
T Consensus 324 ~~~~-----~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 324 EPYR-----KLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred cCcc-----ccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 5422 1224689999999999999999999999987653
No 340
>KOG0053|consensus
Probab=99.80 E-value=4e-17 Score=154.79 Aligned_cols=210 Identities=16% Similarity=0.190 Sum_probs=158.5
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHHH
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQHL 199 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~l 199 (457)
++....|++.++++.|.+.++.++||..|+..++..++..|+.|+.....|+.+..-+ ...|.....++..|++.+
T Consensus 76 nPt~~~le~~iaal~ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~~ 155 (409)
T KOG0053|consen 76 NPTRDVLESGIAALEGAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKKI 155 (409)
T ss_pred CCchHHHHHHHHHHhCCceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHHH
Confidence 5667889999999999999999999999999999999999998888777776655433 345667777766666666
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV 279 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~ 279 (457)
++.++ +++.+|++|++.||...+.++++|+++|+++|+++++|+..+.+.. . ..+ +-++
T Consensus 156 ~~~i~-----------~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~-------~--~pL-~lGA 214 (409)
T KOG0053|consen 156 LKAIK-----------ENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYN-------Q--DPL-PLGA 214 (409)
T ss_pred HHhhc-----------cCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcccc-------c--Chh-hcCC
Confidence 66664 3578999999999999999999999999999999999998654321 1 111 2456
Q ss_pred cEEEecCcccccC----cccEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447 280 DMIIGSLEHALGS----VGGFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS 354 (457)
Q Consensus 280 Di~~~s~sK~lg~----~gG~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~ 354 (457)
||++.|.+|.+|+ .||.++.+ +++...++... -..++.++|..|...+..++.+. -++++..+++-.+.+
T Consensus 215 DIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~--~~lg~~~~p~~~~ll~Rglktl~---lRi~~~~ena~~~A~ 289 (409)
T KOG0053|consen 215 DIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQ--EDLGWCEDPFDLFLLSRGLKTLH---LRINKHSENALKIAL 289 (409)
T ss_pred CEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHH--HHhcCCCCHHHHHHHhcCcchhh---hhHHHHHHHHHHHHH
Confidence 9999999999974 46777775 77777765433 22344578888887766655442 245566666666666
Q ss_pred Hhhcc
Q psy15447 355 LLSQH 359 (457)
Q Consensus 355 ~L~~~ 359 (457)
.|.+.
T Consensus 290 ~Le~~ 294 (409)
T KOG0053|consen 290 LLEAH 294 (409)
T ss_pred HhhhC
Confidence 66663
No 341
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.79 E-value=3.8e-17 Score=174.77 Aligned_cols=304 Identities=13% Similarity=0.100 Sum_probs=195.2
Q ss_pred cccChHHHHHHHHHHHhhcCCCcEEEec-ccHHHHHHHHHhhc----CCCC----EEEEeCcccHHHHHHHHhcCCeEEE
Q psy15447 120 FYGTNVVHLDLENDIASFMGLEETALYS-FGFSTSASAIAAYV----KRND----AVFVDENINFAIQTGLIASRCKVQY 190 (457)
Q Consensus 120 ~~g~~~~~~~l~~~la~~~g~~~~i~~~-sG~~a~~~ai~a~~----~~gd----~v~~~~~~h~~~~~~~~~~g~~~~~ 190 (457)
..|..+...++++.+++++|.+.+-+.. +|+.++.+++.+.. ++|+ .|+++...|++....+...|.++++
T Consensus 537 ~qG~l~~i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~ 616 (954)
T PRK05367 537 AAGYRELIDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVV 616 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEE
Confidence 4566788899999999999998776655 55566544443332 3444 6999999999999999999999988
Q ss_pred ecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCC
Q psy15447 191 FKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTG 265 (457)
Q Consensus 191 ~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g 265 (457)
++.+ |+++|++.+++.. .+.++|++..+...++...|+++|.++|+++|+++++|.++..+..+-.-
T Consensus 617 v~~d~~G~iD~~~L~~~i~~~~--------~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~ 688 (954)
T PRK05367 617 VACDENGNIDLDDLRAKAEEHA--------DNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLAR 688 (954)
T ss_pred ECCCCCCCcCHHHHHHHHhccC--------CCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCC
Confidence 7753 7889988886532 34566666665544333478999999999999999999999755443210
Q ss_pred CccccccCCCCCCccEEEecCcccccC------cc-cEEEecHHHHHHHHhhCC---cce--ecC-CCcHH-HHHHHHHH
Q psy15447 266 HGVTEYFGVSTEEVDMIIGSLEHALGS------VG-GFCVGSSYIIEHHRLSGS---GYC--FSA-SLPPF-LAVAANKA 331 (457)
Q Consensus 266 ~~~~~~~~~~~~~~Di~~~s~sK~lg~------~g-G~v~~~~~~~~~~~~~~~---~~~--~~~-~~~~~-~~aaa~a~ 331 (457)
. .. .++|++++++||+||. +| |++..++.+...+..... ... .+. ...+. .+..+..+
T Consensus 689 p---g~-----~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a 760 (954)
T PRK05367 689 P---GD-----IGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPIS 760 (954)
T ss_pred h---hh-----cCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHH
Confidence 0 01 3468999999999853 12 577777655544421110 000 010 01122 11222233
Q ss_pred HHHHhhC--cHHHHHHH---HHHHHHHHHhhcccccCCeEEeccCC--CCeEEEEe---cCCcchHHHHHHHHHHHHHHH
Q psy15447 332 LHLLKAN--PSLLTKLR---EKCNTMHSLLSQHKVTQRFLVQGHRD--TPLKYLYL---QKSDDEVASKKLLQTICDMCI 401 (457)
Q Consensus 332 l~~~~~~--~~~~~~l~---~~~~~l~~~L~~~~~~~~~~~~~~~~--~~~~~i~~---~~~~~~~~~~~~~~~~~~~l~ 401 (457)
..++... +.+++..+ .+++|+.+.|++ ...+.+.++.. .+-+.+.+ +.... ....++.++|.
T Consensus 761 ~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~---~~~~~~~~~~~~~~~e~i~~~~~~~~~~g-----~~~~di~krL~ 832 (954)
T PRK05367 761 WMYIRMMGAEGLRQATEVAILNANYIAKRLKD---HYPVLYTGANGRVAHECILDLRPLKESTG-----ITVDDIAKRLI 832 (954)
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh---hcCccccCCCCCcccceEEEeecccccCC-----CCHHHHHHHHH
Confidence 3333221 23444444 789999999977 23333322111 11122222 11100 13468999999
Q ss_pred HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 402 QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 402 ~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
+.|+......+| ..+.++|+++...|++|||+++++++.+.+++.+
T Consensus 833 d~G~~~~t~~~p------v~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 833 DYGFHAPTMSFP------VAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred HCCCeEeecCCc------cCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 999987654442 3578999999999999999999999999888765
No 342
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.79 E-value=1.5e-16 Score=154.80 Aligned_cols=311 Identities=11% Similarity=0.060 Sum_probs=196.5
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH-HHhcCCeEEEec---------
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG-LIASRCKVQYFK--------- 192 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~-~~~~g~~~~~~~--------- 192 (457)
-.+...+||+.+++++|.+.++.++||+.|...+....+++||.| ..++|..+..+ +...|....-++
T Consensus 69 g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~ 146 (450)
T TIGR02618 69 GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQL 146 (450)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHHhCCeEEEeeeccccccccc
Confidence 344467999999999999999999999999776667778999977 55777666655 677776444331
Q ss_pred ------CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC-CCCCCC---hHHHHHHHHHcCcEEEEEcCccccc--
Q psy15447 193 ------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN-SADICP---LKDILSLRSKYQARIFVDESVSFGT-- 260 (457)
Q Consensus 193 ------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~-~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~-- 260 (457)
..|++.+++.|++... ..+++|.++...|. +|...| +++|+++|++||+.||+|.++.+|-
T Consensus 147 ~~p~~GniD~~~Le~aI~~~~~-------~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~ 219 (450)
T TIGR02618 147 NIPFKGNVDLKKLQKLIDEVGA-------DKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAY 219 (450)
T ss_pred CCCCCCCcCHHHHHHHhccccC-------cccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChh
Confidence 1279999999975321 23445555555554 577754 7899999999999999999988742
Q ss_pred c------cCCCCccc----cccCCCCCCccEEEecCcccccC-cccEEE-ecHHHHHHHHhhCCcc---eecCCCcHHHH
Q psy15447 261 L------GSTGHGVT----EYFGVSTEEVDMIIGSLEHALGS-VGGFCV-GSSYIIEHHRLSGSGY---CFSASLPPFLA 325 (457)
Q Consensus 261 ~------g~~g~~~~----~~~~~~~~~~Di~~~s~sK~lg~-~gG~v~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 325 (457)
+ |..+.... +.+ ...|.++.|..|..+. .||+++ +++++++..+.....+ ...+.+..-..
T Consensus 220 ~I~~re~g~~~~~i~ei~~e~~----~~aD~~~~S~~Kd~~~~~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~ 295 (450)
T TIGR02618 220 FIKEREQGYEDKSIAEILKEMM----SYADGCTMSGKKDCLVNIGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDM 295 (450)
T ss_pred hhhcccccccCCCHHHHHHHHh----ccCcEEEEeeccCCCCCCceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhH
Confidence 1 11111110 111 2358889999999865 488887 7788888876543222 11111111111
Q ss_pred HHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHH-Hc
Q psy15447 326 VAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCI-QA 403 (457)
Q Consensus 326 aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~-~~ 403 (457)
.+...+|+...+ .....+-.++.++|.+.|.+ .|++++.+.+++.+.+....-... +..+.-++.++.+|- +.
T Consensus 296 ~ala~gL~e~~~-~~y~~~r~~~a~~La~~L~~----~Gvpv~~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~ 370 (450)
T TIGR02618 296 EAMAIGIREAVD-YEYIEHRVKQVRYLGDKLKA----AGVPIVEPVGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVET 370 (450)
T ss_pred HHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHH----CCCcccCCCCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHh
Confidence 111112322211 13445555678999999999 689887778888888865531111 112224556666664 34
Q ss_pred CeeEecc------ccCcc-ccC-CCCCeEEEEec-CCCCHHHHHHHHHHHHHHHHHh
Q psy15447 404 GFAITCP------SHLDQ-EAK-KQKPSIRITCN-ISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 404 Gi~v~~~------~~~~~-~~~-~~~~~lRi~~~-~~~t~edi~~~~~~l~~~~~~~ 451 (457)
||-..-. ..|.. +.. ..-..+|+++| -..|.+++|.+.+++..+.+..
T Consensus 371 gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~ 427 (450)
T TIGR02618 371 GVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHR 427 (450)
T ss_pred CccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhH
Confidence 6654321 11211 111 11357999875 4569999999999999887654
No 343
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.79 E-value=2e-16 Score=154.35 Aligned_cols=309 Identities=12% Similarity=0.080 Sum_probs=193.0
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH-HHhcCCeEEEe-----------
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG-LIASRCKVQYF----------- 191 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~-~~~~g~~~~~~----------- 191 (457)
.+...+||+.+++++|.+.++.++||+.|+..+....+++||.| ...+|..+..+ +...|+...-+
T Consensus 77 d~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~ 154 (460)
T PRK13237 77 SRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSD 154 (460)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEeeecccccccccC
Confidence 34467899999999999999999999999888777778999965 66666666555 66667543322
Q ss_pred ---cC-CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC-CCCC---ChHHHHHHHHHcCcEEEEEcCcccccc--
Q psy15447 192 ---KH-NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS-ADIC---PLKDILSLRSKYQARIFVDESVSFGTL-- 261 (457)
Q Consensus 192 ---~~-~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~-G~i~---~l~~i~~l~~~~g~~li~DEa~~~g~~-- 261 (457)
.. .|++.+++.|++.. ..+++++.++-..|.. |... ++++|+++|++||+.||+|.++.+|..
T Consensus 155 ~p~tgnlD~d~Le~~I~~~~-------~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~f 227 (460)
T PRK13237 155 HPFKGNVDLDKLQALIDEVG-------AENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYF 227 (460)
T ss_pred CCCCCCcCHHHHHHHhcccc-------CCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhh
Confidence 21 28999999997532 1334444444444444 5555 479999999999999999999987621
Q ss_pred ------cCCCCccc----cccCCCCCCccEEEecCcccccC-cccEEEe-cHHHHHHHHhhCCcc-eec--CCCcH-HHH
Q psy15447 262 ------GSTGHGVT----EYFGVSTEEVDMIIGSLEHALGS-VGGFCVG-SSYIIEHHRLSGSGY-CFS--ASLPP-FLA 325 (457)
Q Consensus 262 ------g~~g~~~~----~~~~~~~~~~Di~~~s~sK~lg~-~gG~v~~-~~~~~~~~~~~~~~~-~~~--~~~~~-~~~ 325 (457)
|..+.... +.+ .-.|+++.|++|.++. .||+++. ++++.+.++.....+ .|. +.+.. -..
T Consensus 228 I~~re~~y~~~~i~ei~~e~~----s~aD~~t~S~~K~~~~~~GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~ 303 (460)
T PRK13237 228 IKEREEGYQDKSIKEIVHEMF----SYADGCTMSGKKDCLVNIGGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDME 303 (460)
T ss_pred hcccccccCCCcHhHHhhhcc----CcCcEEEEeCCCCCCCCCceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHH
Confidence 11111110 111 2348899999999964 4787655 567777776543222 111 11211 111
Q ss_pred HHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHH-Hc
Q psy15447 326 VAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCI-QA 403 (457)
Q Consensus 326 aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~-~~ 403 (457)
|.+....+.++. +..++.-++.++|.+.|.+ .|+++..+.+++.+++....-... +..+.-++.++.+|- +.
T Consensus 304 alAvgl~E~~~~--~y~~~ri~~~~~l~~~L~~----~Gvpv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~ 377 (460)
T PRK13237 304 AMAIGIEESVQY--EYIEHRVGQVRYLGEKLLA----AGVPIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIES 377 (460)
T ss_pred HHHhHHHhhchH--HHHHHHHHHHHHHHHHHHH----CCCceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHHh
Confidence 222222222222 3555666688999999998 899998777788777754321100 111123456666654 34
Q ss_pred CeeEecc------ccCcc-ccC-CCCCeEEEEec-CCCCHHHHHHHHHHHHHHHHHh
Q psy15447 404 GFAITCP------SHLDQ-EAK-KQKPSIRITCN-ISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 404 Gi~v~~~------~~~~~-~~~-~~~~~lRi~~~-~~~t~edi~~~~~~l~~~~~~~ 451 (457)
||-..-. ..|.. +.. ..-..+|+++| -..|.+++|.+.+++..+.+..
T Consensus 378 GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~ 434 (460)
T PRK13237 378 GVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHR 434 (460)
T ss_pred CcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHhH
Confidence 6654311 12211 111 11367999875 4569999999999999887654
No 344
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.79 E-value=7.5e-17 Score=157.36 Aligned_cols=306 Identities=11% Similarity=0.048 Sum_probs=201.6
Q ss_pred ChhhHHHHHHHHHhcC-----CCCCCCCCcccChHHHHHHHHHHHhhcCC-C--cEEEe-cccHHHHHHHHHhhcCCCCE
Q psy15447 96 NPDIEKCAIDCIDKNG-----VGSCGPRGFYGTNVVHLDLENDIASFMGL-E--ETALY-SFGFSTSASAIAAYVKRNDA 166 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~-----~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~--~~i~~-~sG~~a~~~ai~a~~~~gd~ 166 (457)
+++|++|+.+.+..+. ...-+.|.. --.+...+..++|+++++. + .++++ +||+.++++++..+..+|+.
T Consensus 15 p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~-~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~~ 93 (360)
T PRK05355 15 PEEVLEQAQQELLDWNGSGMSVMEISHRSK-EFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGGGKK 93 (360)
T ss_pred CHHHHHHHHHHhhccccCCccccccCCCCH-HHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCCCCe
Confidence 5789999888876542 111111110 0137788899999999995 2 35444 67888999999998888765
Q ss_pred EEE-eCcccHHH-HHHHHhcCCeEE-Eec----CCCHHHHHH-HHHhhchhcccCCCCccEEEEEecCCCCCCCCC-ChH
Q psy15447 167 VFV-DENINFAI-QTGLIASRCKVQ-YFK----HNNMQHLEE-LLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC-PLK 237 (457)
Q Consensus 167 v~~-~~~~h~~~-~~~~~~~g~~~~-~~~----~~d~~~le~-~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~-~l~ 237 (457)
+.+ ..+.++.. ..-++..|.... ..+ ..+..++++ .++ ++.++|.+.+.-+.+|.+. |++
T Consensus 94 ~l~i~~G~fg~r~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~l~-----------~~~~~V~~th~eTstGv~~~~i~ 162 (360)
T PRK05355 94 ADYVDTGSWSKKAIKEAKKYGEVNVAASSEDDGFTYIPPLDEWQLS-----------DDAAYVHYTSNETIDGTEFHELP 162 (360)
T ss_pred EEEEECCHHHHHHHHHHHHhCCceEEecccccCCCCCCChhhccCC-----------CCCCEEEEccCCCcceEecCccc
Confidence 433 33333332 333444454321 111 112233333 332 2346888888888899997 677
Q ss_pred HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhh-C----
Q psy15447 238 DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLS-G---- 311 (457)
Q Consensus 238 ~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~-~---- 311 (457)
+| ||+++++|.++++|.. .++.++.|+++.|.+|++|++| |+++.++++++.+... .
T Consensus 163 ~i------~g~l~vVDavss~g~~-----------~idv~~~d~~~~ssqK~lgP~Glg~l~~s~~~l~~~~~~~~~~~~ 225 (360)
T PRK05355 163 DT------GDVPLVADMSSDILSR-----------PIDVSKFGLIYAGAQKNIGPAGLTIVIVREDLLGRALPSIPSMLD 225 (360)
T ss_pred cc------CCCcEEEEcCccccCc-----------cCCHHHccEEEEeccccccCCceEEEEECHHHHhhcccCCChHHH
Confidence 66 8999999999987643 2333445799999999999776 8899999888775431 1
Q ss_pred ------CcceecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCe-EEecc--CCC-CeEEE
Q psy15447 312 ------SGYCFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRF-LVQGH--RDT-PLKYL 378 (457)
Q Consensus 312 ------~~~~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~-~~~~~--~~~-~~~~i 378 (457)
..... +++|-....+..++|+++.+. +.+.++.+++.+++++.|+++ ++ ....+ ..+ .++.+
T Consensus 226 ~~~~~~~~~~~-~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~----~~~~~~~~~~~rs~~v~sf 300 (360)
T PRK05355 226 YKTHADNDSMY-NTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSS----DFYRNPVAPEDRSRMNVPF 300 (360)
T ss_pred HHHHHhcCCcc-CCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhC----CCcccCCChhhcCCcEEEE
Confidence 01111 234555666667889888654 467788899999999999993 32 11111 223 45666
Q ss_pred EecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 379 YLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
.+++.. ...++.+.+.++|+.+.+... ..+.+|+++...+|++|||+++++|++++.
T Consensus 301 ~~~~~~-------~~~~~~~~~~~~Gi~~~~~~~-------~~g~vRiS~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 301 TLADEE-------LDKKFLAEAKAAGLVGLKGHR-------SVGGMRASIYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred EcCChH-------HHHHHHHHHHHCCCcccCCCC-------ccCcEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 665532 335677788889998743321 236899999999999999999999999765
No 345
>PLN02263 serine decarboxylase
Probab=99.79 E-value=6.2e-16 Score=152.24 Aligned_cols=288 Identities=8% Similarity=0.011 Sum_probs=193.1
Q ss_pred ChHHHHHHHHHHHhhcCCCc----EEEecccHHHHHHHHHhhcC--CCCEEEEeCcccHHHHHHHHhcCCeEEEecCC--
Q psy15447 123 TNVVHLDLENDIASFMGLEE----TALYSFGFSTSASAIAAYVK--RNDAVFVDENINFAIQTGLIASRCKVQYFKHN-- 194 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~----~i~~~sG~~a~~~ai~a~~~--~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-- 194 (457)
+.+...++-+.+++++|.+. ..++++|+++|..++.+..+ +..+++++...|.++.+++++.|.+++.++.+
T Consensus 131 s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~ 210 (470)
T PLN02263 131 SRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTLVS 210 (470)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccCCC
Confidence 45566667777777787532 57889999999999987654 33478889999999999999999888877643
Q ss_pred ---CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCc-----EEEEEcCcccccccCCCC
Q psy15447 195 ---NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQA-----RIFVDESVSFGTLGSTGH 266 (457)
Q Consensus 195 ---d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~-----~li~DEa~~~g~~g~~g~ 266 (457)
|+++|++.|.+.. ..+.+|+..-...++|.+.|+++|.++|++||+ ||++|.+++...+.. .+
T Consensus 211 g~mD~~aL~~aI~~d~--------~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf-~~ 281 (470)
T PLN02263 211 GEIDCADFKAKLLANK--------DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPF-VK 281 (470)
T ss_pred CcCcHHHHHHHHHhCC--------CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhh-cc
Confidence 7999999887632 234566666666689999999999999999997 999999997554421 11
Q ss_pred ccccccCCCCCCccEEEecCcccccCc--ccEEEecHHHHHHHHhh-----CCcceecCCCcHHHHHHHHHHHHHHhh--
Q psy15447 267 GVTEYFGVSTEEVDMIIGSLEHALGSV--GGFCVGSSYIIEHHRLS-----GSGYCFSASLPPFLAVAANKALHLLKA-- 337 (457)
Q Consensus 267 ~~~~~~~~~~~~~Di~~~s~sK~lg~~--gG~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~aaa~a~l~~~~~-- 337 (457)
.. +.+... ..+|.+..+.||.++.+ .|+++.++...+.+... ....+..++-+.......-.+|+.+..
T Consensus 282 ~~-~~~df~-~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G 359 (470)
T PLN02263 282 RA-PKVTFK-KPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRG 359 (470)
T ss_pred cc-cccCCC-cCccEEEECCccccCCCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHH
Confidence 11 112211 23789999999999743 46666665544333111 011122222222112222233443322
Q ss_pred CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc
Q psy15447 338 NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA 417 (457)
Q Consensus 338 ~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~ 417 (457)
..+..++..++++++.+.|++ .|+.....+...++.+..+.+. ...+|-.+.+.
T Consensus 360 ~~~~i~~~~~~A~~l~~~l~~----~g~~~~~~p~s~~V~f~~p~~~---------------~~~~gW~L~~~------- 413 (470)
T PLN02263 360 FQKEVQKCLRNAHYLKDRLRE----AGISAMLNELSSTVVFERPKDE---------------EFVRRWQLACQ------- 413 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHHh----CCCeEEeCCCceEEEEecCchH---------------HhhcceEEccC-------
Confidence 234667777889999999998 5777666666777666533211 12456655442
Q ss_pred CCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 418 KKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 418 ~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
++.+++++...++++.+|++++-|++..+.
T Consensus 414 ---~~~~Hivvmphv~~~~id~fi~DL~~~~~~ 443 (470)
T PLN02263 414 ---GNIAHVVVMPSVTIEKLDYFLKELVEKRST 443 (470)
T ss_pred ---CCcEEEEEcCCCCHHHHHHHHHHHHHHHhh
Confidence 246889888878999999999999887763
No 346
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.79 E-value=5.8e-16 Score=156.65 Aligned_cols=288 Identities=15% Similarity=0.160 Sum_probs=181.4
Q ss_pred EEEecccHHHHHHHHHhhcC--------------------------CCCEEEEeCcccHHHHHHHHhcCC---eEEEecC
Q psy15447 143 TALYSFGFSTSASAIAAYVK--------------------------RNDAVFVDENINFAIQTGLIASRC---KVQYFKH 193 (457)
Q Consensus 143 ~i~~~sG~~a~~~ai~a~~~--------------------------~gd~v~~~~~~h~~~~~~~~~~g~---~~~~~~~ 193 (457)
.+++++|++||..|+.+... ++..|+++...|.++.+++.+.|. +++.++.
T Consensus 162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~ 241 (522)
T TIGR03799 162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKT 241 (522)
T ss_pred eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEe
Confidence 47788999999988754321 234788899999999999988886 5665553
Q ss_pred C-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCccccccc-CCCCc
Q psy15447 194 N-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLG-STGHG 267 (457)
Q Consensus 194 ~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g-~~g~~ 267 (457)
+ |+++|++.|++.... .....+|+.....+.+|.+.|+++|.++|++||+++++|.+|+.+.+- ...+.
T Consensus 242 d~~g~~d~~~L~~~i~~~~~~-----g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~ 316 (522)
T TIGR03799 242 DANNRIDVDALRDKCAELAEQ-----NIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRH 316 (522)
T ss_pred CCCCcCCHHHHHHHHHHHHHC-----CCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHH
Confidence 2 799999999754321 122334444445557999999999999999999999999998754321 10000
Q ss_pred cccccCCCCCCccEEEecCccccc-Ccc-cEEEe-cHHHHHHHHhhC-----------CcceecCCCcHHHHHHHHHHHH
Q psy15447 268 VTEYFGVSTEEVDMIIGSLEHALG-SVG-GFCVG-SSYIIEHHRLSG-----------SGYCFSASLPPFLAVAANKALH 333 (457)
Q Consensus 268 ~~~~~~~~~~~~Di~~~s~sK~lg-~~g-G~v~~-~~~~~~~~~~~~-----------~~~~~~~~~~~~~~aaa~a~l~ 333 (457)
. ..++ .++|.++.+.||+++ +.| |+++. ++...+.+.... ..+.+.++-+..+ ...-++++
T Consensus 317 ~--l~gl--e~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~ 391 (522)
T TIGR03799 317 L--LKGI--ERADSVTIDAHKQLYVPMGAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLH 391 (522)
T ss_pred H--hcCc--hhCCEEEEChhhcCCcCcccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHH-HHHHHHHH
Confidence 0 1233 356999999999774 333 66554 455545443210 0122333323322 22345566
Q ss_pred HHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc---------------hHHHHHHHHHH
Q psy15447 334 LLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD---------------EVASKKLLQTI 396 (457)
Q Consensus 334 ~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------------~~~~~~~~~~~ 396 (457)
.+... ..+.++..+++++|.+.|++ .+++++..++...++.+.+....- .+........+
T Consensus 392 ~lG~~G~~~ii~~~~~la~~l~~~L~~---~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i 468 (522)
T TIGR03799 392 IIGRKGYELLIDQSIEKAKYFADLIQQ---QPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFI 468 (522)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhh---CCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHH
Confidence 65432 46778888999999999988 679999877777788877643210 01112234577
Q ss_pred HHHHHHcCeeEec-ccc-CccccCCCCCeEEEEe-cCCCCHHHHHHHHHH
Q psy15447 397 CDMCIQAGFAITC-PSH-LDQEAKKQKPSIRITC-NISHTEQDMNSLIET 443 (457)
Q Consensus 397 ~~~l~~~Gi~v~~-~~~-~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~ 443 (457)
.+++.+.|..... ... +......+...+|+++ +..+|+++|+.+++-
T Consensus 469 ~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 469 QKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred HHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence 8888888855432 211 1000011225699998 556778899887653
No 347
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.78 E-value=1.3e-16 Score=166.87 Aligned_cols=306 Identities=10% Similarity=0.062 Sum_probs=195.9
Q ss_pred CcccChHHHHHHHHHHHhhcCCCcEEEec-ccHHHHHHHHHhhc--------CCCCEEEEeCcccHHHHHHHHhcCCeEE
Q psy15447 119 GFYGTNVVHLDLENDIASFMGLEETALYS-FGFSTSASAIAAYV--------KRNDAVFVDENINFAIQTGLIASRCKVQ 189 (457)
Q Consensus 119 ~~~g~~~~~~~l~~~la~~~g~~~~i~~~-sG~~a~~~ai~a~~--------~~gd~v~~~~~~h~~~~~~~~~~g~~~~ 189 (457)
...|+.....++++.+++++|.+.+-+.. +|+.+..+++.+.. ..++.|+++...|++....+...|.+++
T Consensus 537 ~sQG~lq~i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv 616 (954)
T PRK12566 537 QAEGYRAMIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVV 616 (954)
T ss_pred hhcCHHHHHHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEE
Confidence 35678889999999999999999875554 77766655554432 2346888999999777666778899998
Q ss_pred EecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCC
Q psy15447 190 YFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGST 264 (457)
Q Consensus 190 ~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~ 264 (457)
.++.+ |+++|++.+.+.. +++++|++..+.+.++...|+++|.++|+++|+++++|.++..+..+-
T Consensus 617 ~Vp~D~~G~iDle~L~a~I~~~~--------~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l- 687 (954)
T PRK12566 617 IVECDPDGNVDLDDLKAKAAAAG--------DRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGL- 687 (954)
T ss_pred EeccCCCCCcCHHHHHHHhhccC--------CCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCC-
Confidence 88763 7899999997543 467777777777555555679999999999999999999986543221
Q ss_pred CCccccccCCCCCCccEEEecCcccccC---cc----cEEEecHHHHHHHHhhC-------CcceecCC-CcHHHHHHHH
Q psy15447 265 GHGVTEYFGVSTEEVDMIIGSLEHALGS---VG----GFCVGSSYIIEHHRLSG-------SGYCFSAS-LPPFLAVAAN 329 (457)
Q Consensus 265 g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~g----G~v~~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~aaa~ 329 (457)
. .....++|+++++++|+||. .| |.+..++.+...++... .+..-+.+ .+...+..+.
T Consensus 688 ----~---~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~ 760 (954)
T PRK12566 688 ----A---RPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILP 760 (954)
T ss_pred ----C---ChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHH
Confidence 0 00113569999999999963 22 34444555544444211 00000111 1111112233
Q ss_pred HHHHHHhh-CcHH---HHHHHHHHHHHHHHhhcccccCCeEEeccCCCCe---EEEEecCCcchHHHHHHHHHHHHHHHH
Q psy15447 330 KALHLLKA-NPSL---LTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPL---KYLYLQKSDDEVASKKLLQTICDMCIQ 402 (457)
Q Consensus 330 a~l~~~~~-~~~~---~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~l~~ 402 (457)
+++.++.. ..++ .+....++.|+.+.|.+ ..++.+. ...+++ +.+.+..-.. .......++.++|++
T Consensus 761 ~A~~Yi~~lG~eLk~aa~~ailnAnYla~rL~~---~~~v~~~-~~~~~~~hEfii~~~~l~~--~~g~~~~dvakRL~d 834 (954)
T PRK12566 761 ISWMYIAMMGPQLADASEVAILSANYLANQLGG---AFPVLYR-GRNERVAHECILDLRPLKA--QTGISEEDVAKRLMD 834 (954)
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHhHh---hCCCCcC-CCCCCeeeEEEEEcccccc--ccCCCHHHHHHHHHH
Confidence 34444332 1222 12224588899999976 2343332 222221 2222221000 000134679999999
Q ss_pred cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 403 AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 403 ~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
.||......+ +..+.+|++++...|++|||+++++++.+.+++.
T Consensus 835 ~Gihapt~~f------Pv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~ 878 (954)
T PRK12566 835 YGFHAPTMSF------PVPGTLMVEPTESESKAELDRFVEAMLSIRAEIG 878 (954)
T ss_pred CCcEEeEEee------ccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 9998765443 2368999999999999999999999999988864
No 348
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.77 E-value=3.1e-16 Score=164.98 Aligned_cols=305 Identities=10% Similarity=0.058 Sum_probs=200.6
Q ss_pred CcccChHHHHHHHHHHHhhcCCCcE-EEecccHHHHHHHHHhhc--------CCCCEEEEeCcccHHHHHHHHhcCCeEE
Q psy15447 119 GFYGTNVVHLDLENDIASFMGLEET-ALYSFGFSTSASAIAAYV--------KRNDAVFVDENINFAIQTGLIASRCKVQ 189 (457)
Q Consensus 119 ~~~g~~~~~~~l~~~la~~~g~~~~-i~~~sG~~a~~~ai~a~~--------~~gd~v~~~~~~h~~~~~~~~~~g~~~~ 189 (457)
...|......++++.|++++|.+.+ +..++|+.+..+++.+.. .+.+.|+++...|++....+...|.+++
T Consensus 524 ~sqG~lq~i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv 603 (939)
T TIGR00461 524 QVEGYQELIAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVV 603 (939)
T ss_pred HhHHHHHHHHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEE
Confidence 4567788999999999999999865 455667766554443332 2346899999999888888889999988
Q ss_pred EecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC-hHHHHHHHHHcCcEEEEEcCcccccccC
Q psy15447 190 YFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP-LKDILSLRSKYQARIFVDESVSFGTLGS 263 (457)
Q Consensus 190 ~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~-l~~i~~l~~~~g~~li~DEa~~~g~~g~ 263 (457)
.++.+ |+++|++.++++. +++++|++..+++ .|.+.| +++|.++|+++|.++++|.++..+..+.
T Consensus 604 ~V~~d~~G~iDle~L~~~i~~~~--------~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l 674 (939)
T TIGR00461 604 PVNCDQDGNIDLVDLKNKAEQHG--------DELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGL 674 (939)
T ss_pred EeccCCCCCcCHHHHHHHHhhcC--------CceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCC
Confidence 88763 8999999997532 4567888877776 688877 9999999999999999999986432221
Q ss_pred CCCccccccCCCCCCccEEEecCcccccC------cc-cEEEecHHHHHHHHhhCC-------------cceec-CCCcH
Q psy15447 264 TGHGVTEYFGVSTEEVDMIIGSLEHALGS------VG-GFCVGSSYIIEHHRLSGS-------------GYCFS-ASLPP 322 (457)
Q Consensus 264 ~g~~~~~~~~~~~~~~Di~~~s~sK~lg~------~g-G~v~~~~~~~~~~~~~~~-------------~~~~~-~~~~~ 322 (457)
. .....++|++++|.+|+|+. +| |+++.++.+..++..... +.+.+ ...+.
T Consensus 675 ~--------~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a 746 (939)
T TIGR00461 675 T--------SPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSA 746 (939)
T ss_pred C--------CccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcH
Confidence 1 00113569999999998852 22 788888776655421100 00001 01122
Q ss_pred HHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-CCCe---EEEEecCCcchHHHHHHHHHH
Q psy15447 323 FLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR-DTPL---KYLYLQKSDDEVASKKLLQTI 396 (457)
Q Consensus 323 ~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~-~~~~---~~i~~~~~~~~~~~~~~~~~~ 396 (457)
..+-.+..-+..+..+ .+..+..-.+++|+.+.|++ ++++..+. .+++ +.+.+.... +.......++
T Consensus 747 ~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~-----~~~~l~~~~~~~~~hEfv~~~~~~~--~~~g~~~~dI 819 (939)
T TIGR00461 747 SILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD-----HYPILFVGTLKHVAHECILDLRPLK--AKTGIEAIDV 819 (939)
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc-----cCcccccCCCCceeEEEEEeccchh--hhcCCCHHHH
Confidence 2222222223434322 23445566688999999977 23333222 2232 223332110 0001146789
Q ss_pred HHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 397 CDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 397 ~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
.++|++.|+......|| ..+.+.|.|+-..|++|||++++++.++.+++.+
T Consensus 820 akrL~d~G~hapt~~~p------v~g~lmiepTE~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 820 AKRLQDYGFHAPTLSFP------VPGTLMVEPTESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred HHHHHhCCeeccccCCc------cCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999976544332 2458889999999999999999999999888765
No 349
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.77 E-value=2.7e-16 Score=161.47 Aligned_cols=305 Identities=12% Similarity=0.078 Sum_probs=196.3
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccH-HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGF-STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN------- 194 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------- 194 (457)
......+.++..|+.+|.+++.|+++|+ .+|..++.+++++||.|++++.+|-++..++.++|+..+++...
T Consensus 193 ~~G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~ 272 (714)
T PRK15400 193 HSGPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGIL 272 (714)
T ss_pred CChHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCc
Confidence 3556788999999999999999998886 67899999999999999999999999999999999988876421
Q ss_pred ---C-----HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccc-cccCCC
Q psy15447 195 ---N-----MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFG-TLGSTG 265 (457)
Q Consensus 195 ---d-----~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g-~~g~~g 265 (457)
+ ++.+++.+++.... ..+..+|++.|-+ .|.+.++++|.++|+.++ +++||||+.- .+.+.-
T Consensus 273 g~I~~~~~~~e~i~~~i~~~p~a-----k~p~~~vit~pTY--dG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~ 343 (714)
T PRK15400 273 GGIPQSEFQHATIAKRVKETPNA-----TWPVHAVITNSTY--DGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIY 343 (714)
T ss_pred cCCCccccCHHHHHHHHHhCccc-----cCccEEEEECCCC--ccEecCHHHHHHHhCCCC--EEEEccchhhhccCccc
Confidence 3 78899988765310 0112466666544 599999999999999888 6899998632 122211
Q ss_pred Ccccc-ccCCCCCCccEEEecCcccccCc--ccEEEecHHHH-HHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh--Cc
Q psy15447 266 HGVTE-YFGVSTEEVDMIIGSLEHALGSV--GGFCVGSSYII-EHHRLSGSGYCFSASLPPFLAVAANKALHLLKA--NP 339 (457)
Q Consensus 266 ~~~~~-~~~~~~~~~Di~~~s~sK~lg~~--gG~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~--~~ 339 (457)
++... ..|-++++..+++.|.||.+++. ++++-.+..+- +.+.. ......|+|++.+.+|..-.+..+++. ..
T Consensus 344 ~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd~~~~n~-a~~m~~STSPsY~l~ASLD~a~~~m~~~~G~ 422 (714)
T PRK15400 344 EGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNE-AYMMHTTTSPHYGIVASTETAAAMMKGNAGK 422 (714)
T ss_pred CCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCCCHHHHHH-HHHHHcCCCcHHHHHHHHHHHHHHHHhhhhH
Confidence 10010 12222232238999999999642 22221111111 11211 111223344455555555566666653 35
Q ss_pred HHHHHHHHHHHHHHHHhhcccccCC------eEEeccCC----------------------------CCe-EEEEecC-C
Q psy15447 340 SLLTKLREKCNTMHSLLSQHKVTQR------FLVQGHRD----------------------------TPL-KYLYLQK-S 383 (457)
Q Consensus 340 ~~~~~l~~~~~~l~~~L~~~~~~~~------~~~~~~~~----------------------------~~~-~~i~~~~-~ 383 (457)
++.+...+.+..+++.|.+ +.+ +.+..+.. -|+ +.+..+. +
T Consensus 423 ~l~~~~i~~a~~~R~~l~~---~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~ 499 (714)
T PRK15400 423 RLINGSIERAIKFRKEIKR---LRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMK 499 (714)
T ss_pred HHHHHHHHHHHHHHHHHHh---CCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEEEeCCCC
Confidence 6778888889999998877 334 44432110 011 1111111 0
Q ss_pred cch--HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 384 DDE--VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 384 ~~~--~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
... +.....+..+.+.|.++||.+.... .+.+-+.++...|+++++.++++|.++-+
T Consensus 500 ~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d---------~~~iLfl~s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 500 KDGTMSDFGIPASIVAKYLDEHGIVVEKTG---------PYNLLFLFSIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred CCccccccCCCHHHHHHHHHHcCCEEEecC---------CCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 000 0011235578889999999886543 46788888889999999999999988744
No 350
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.77 E-value=4.2e-16 Score=160.15 Aligned_cols=308 Identities=12% Similarity=0.062 Sum_probs=192.3
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccH-HHHHHHHHhhcCCCCEEEEeCcccHHHHHH-HHhcCCeEEEecCC------
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGF-STSASAIAAYVKRNDAVFVDENINFAIQTG-LIASRCKVQYFKHN------ 194 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~-~~~~g~~~~~~~~~------ 194 (457)
......+.++..|+.+|.+++.|+.+|+ .+|.+++.+.+++||.|++++.+|-++..+ +.++|+..+++...
T Consensus 172 ~eG~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~Gi 251 (720)
T PRK13578 172 HEGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGF 251 (720)
T ss_pred CChHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccccCC
Confidence 4566788899999999999999888887 579999999999999999999999999986 99999888775421
Q ss_pred ----C-----HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHH-HHHcCcEEEEEcCcccc-cccC
Q psy15447 195 ----N-----MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSL-RSKYQARIFVDESVSFG-TLGS 263 (457)
Q Consensus 195 ----d-----~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l-~~~~g~~li~DEa~~~g-~~g~ 263 (457)
+ .+.+++.|++...+.....++.+.+|++.|-+ .|.+.++++|.++ |+.++ .|++||||+.- .+.+
T Consensus 252 ~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY--dG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~p 328 (720)
T PRK13578 252 IGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY--DGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFIP 328 (720)
T ss_pred cCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC--cceeecHHHHHHHhhccCC-cEEEeCcchhhhccCc
Confidence 3 45588888775211001111123455555544 5999999999998 68888 99999998632 2222
Q ss_pred CCCccccccCCCCCCcc----EEEecCcccccCc--ccEEEecHHHH---------HHHHhhCCccee-cCCCcHHHHHH
Q psy15447 264 TGHGVTEYFGVSTEEVD----MIIGSLEHALGSV--GGFCVGSSYII---------EHHRLSGSGYCF-SASLPPFLAVA 327 (457)
Q Consensus 264 ~g~~~~~~~~~~~~~~D----i~~~s~sK~lg~~--gG~v~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~~aa 327 (457)
..+++... .+. .+.| +++.|.||.+++. ++++-.+...+ +.++... ..+ |+|++.+.+|.
T Consensus 329 ~~~~~p~~-al~-~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al--~m~qSTSPsY~LmAS 404 (720)
T PRK13578 329 MMADCSPL-LLE-LNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAF--MLHASTSPFYPLFAA 404 (720)
T ss_pred ccccCChh-hhh-cCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHH--HHHcCCChHHHHHHH
Confidence 11111111 111 2345 9999999999642 34442222111 1222111 123 33434444343
Q ss_pred HHHHHHHHhh--CcHHHHHHHHHHHHHHHHh-hcccccCCeEEeccC--------------------------C------
Q psy15447 328 ANKALHLLKA--NPSLLTKLREKCNTMHSLL-SQHKVTQRFLVQGHR--------------------------D------ 372 (457)
Q Consensus 328 a~a~l~~~~~--~~~~~~~l~~~~~~l~~~L-~~~~~~~~~~~~~~~--------------------------~------ 372 (457)
.-.+-++++. ..++.+...+.+..+++.| +. ..++.+..+. +
T Consensus 405 LDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~---~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~~whgf 481 (720)
T PRK13578 405 LDVNAKMHEGESGRRLWMECVKLGIEARKLILAR---CKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGF 481 (720)
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHh---CCCeeecccccccccccccCchhhhcccccccccccCcccccc
Confidence 3344555543 3567788888888888887 44 3444443110 0
Q ss_pred ----------CCe-EEEEecCCc--ch--HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHH
Q psy15447 373 ----------TPL-KYLYLQKSD--DE--VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDM 437 (457)
Q Consensus 373 ----------~~~-~~i~~~~~~--~~--~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi 437 (457)
-|+ +.+...+-. .. +..+.-+..+.+.|+++||.+-... .+.+-+.++...|++++
T Consensus 482 ~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d---------~~~vL~l~s~g~t~~~~ 552 (720)
T PRK13578 482 EGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCD---------LNSILFLLTPAEDMAKL 552 (720)
T ss_pred ccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecC---------CCeEEEEeCCCCCHHHH
Confidence 011 111111100 00 0001125678889989999886543 35777888888999999
Q ss_pred HHHHHHHHHHHH
Q psy15447 438 NSLIETLCKSHD 449 (457)
Q Consensus 438 ~~~~~~l~~~~~ 449 (457)
++++++|.++.+
T Consensus 553 ~~Lv~aL~~f~~ 564 (720)
T PRK13578 553 QQLVAMLARFEK 564 (720)
T ss_pred HHHHHHHHHHHH
Confidence 999999998754
No 351
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.75 E-value=1.7e-15 Score=155.59 Aligned_cols=303 Identities=12% Similarity=0.086 Sum_probs=192.5
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccH-HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC--------
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGF-STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------- 194 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------- 194 (457)
.....+.++..|+.+|.+++.|+.+|+ .+|..++.+.+.+||.|++++.+|-++..++.++|+..+++...
T Consensus 194 ~G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi~g 273 (713)
T PRK15399 194 TGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGILG 273 (713)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccCCcC
Confidence 456778889999999999999998886 67999999999999999999999999999999999988876421
Q ss_pred --CH-----HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEE-EEEcCcccc-cccCCC
Q psy15447 195 --NM-----QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARI-FVDESVSFG-TLGSTG 265 (457)
Q Consensus 195 --d~-----~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~l-i~DEa~~~g-~~g~~g 265 (457)
++ +.+++.+++.... +.++++|++.|-+ .|.+.++++|.++| |+.+ ++||||+.- .+.+..
T Consensus 274 ~I~~~~~~~e~I~~~i~~~p~~-----~~p~~vvit~pTY--dGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~ 343 (713)
T PRK15399 274 GIPRREFTRDSIEEKVAATTQA-----QWPVHAVITNSTY--DGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIY 343 (713)
T ss_pred CCChhhccHHHHHHHHHhCCCc-----CCceEEEEECCCC--CceeeCHHHHHHHh---CCCEEEEeccchhhhhcCccc
Confidence 23 8888888775310 0113556665544 59999999999999 5666 699998631 122211
Q ss_pred CccccccCC-CCCCccEEEecCcccccC--cccEEEecHHHH-HHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh--Cc
Q psy15447 266 HGVTEYFGV-STEEVDMIIGSLEHALGS--VGGFCVGSSYII-EHHRLSGSGYCFSASLPPFLAVAANKALHLLKA--NP 339 (457)
Q Consensus 266 ~~~~~~~~~-~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~--~~ 339 (457)
.+.....+. .+|-+.+++.|.||.+++ .++++-.+..+- +.+.. ......|+|++.+.+|..-.+.++++. ..
T Consensus 344 ~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~-a~~m~~STSPsY~LmASLD~a~~~m~~~~G~ 422 (713)
T PRK15399 344 QGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNE-AFMMHTSTSPSYPIVASVETAAAMLRGNPGK 422 (713)
T ss_pred CCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHH-HHHHHcCCCcHHHHHHHHHHHHHHHHhhhhH
Confidence 111111111 122223449999999964 234543332221 12221 111223344455555555556666653 35
Q ss_pred HHHHHHHHHHHHHHHHhhcccccCC------eEEeccC--------------C--------------CCe-EEEEecCC-
Q psy15447 340 SLLTKLREKCNTMHSLLSQHKVTQR------FLVQGHR--------------D--------------TPL-KYLYLQKS- 383 (457)
Q Consensus 340 ~~~~~l~~~~~~l~~~L~~~~~~~~------~~~~~~~--------------~--------------~~~-~~i~~~~~- 383 (457)
++.+...+.+..+++.|.++ .+ +.+..+. . -|+ +.+..+.-
T Consensus 423 ~l~~~~i~~a~~fR~~l~~~---~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~ 499 (713)
T PRK15399 423 RLINRSVERALHFRKEVQRL---REESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMD 499 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhc---cccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEecCcc
Confidence 67788888888899888763 22 2332110 0 011 11111110
Q ss_pred cch--HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 384 DDE--VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 384 ~~~--~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
... +.....+..+.+.|.++||.+.... .+.+-+.++...|++++++++++|.++-+
T Consensus 500 ~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d---------~~~vL~l~s~g~t~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 500 EQGNMSEEGIPAALVAKFLDERGIVVEKTG---------PYNLLFLFSIGIDKTKAMGLLRGLTEFKR 558 (713)
T ss_pred cccccccCCCCHHHHHHHHHHcCCEEEecC---------CCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 000 0112245678889999999886544 36788888889999999999999987744
No 352
>KOG0633|consensus
Probab=99.71 E-value=1.7e-15 Score=132.71 Aligned_cols=285 Identities=17% Similarity=0.167 Sum_probs=189.1
Q ss_pred HHHHHHHhhcCCC-cEEEecccH-HHHHHHHHhhcCCC-CEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHH
Q psy15447 129 DLENDIASFMGLE-ETALYSFGF-STSASAIAAYVKRN-DAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLE 200 (457)
Q Consensus 129 ~l~~~la~~~g~~-~~i~~~sG~-~a~~~ai~a~~~~g-d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le 200 (457)
++...++.--+.. +-+...-|+ +.+.+.|++.|.|| +.|+.-.+.|.-+.-.+.+.++.++.++.+ +.+++.
T Consensus 73 ~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~ 152 (375)
T KOG0633|consen 73 RLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIA 152 (375)
T ss_pred hhhhhcccCCCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHH
Confidence 3444444433322 446666666 77888999999999 678777777766555667788888888765 577777
Q ss_pred HHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc-CcEEEEEcCcc-cccccCCCCccccccCCCCCC
Q psy15447 201 ELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY-QARIFVDESVS-FGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~-g~~li~DEa~~-~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+.++.. ..+++++..++.||+|.+...+.|.++.+.- +.++++||+|- |...+.+-.+..++-+
T Consensus 153 evl~~d---------s~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpN----- 218 (375)
T KOG0633|consen 153 EVLELD---------SKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPN----- 218 (375)
T ss_pred HHHhcc---------ccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCc-----
Confidence 777642 3678899999999999999988888888754 78999999984 3222221122222222
Q ss_pred ccEEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHH--HHhhCcHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALH--LLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 279 ~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~--~~~~~~~~~~~l~~~~~~l~ 353 (457)
-+++.|+||.+|..| ||.+.+..+++.+.....+|..+.. ...+|++++. -.+..+..+..+.+...++.
T Consensus 219 -LivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~KaPYNiS~~----~s~~AL~Als~~n~kkme~~rdaiv~er~RL~ 293 (375)
T KOG0633|consen 219 -LIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRAKAPYNISVA----GSVAALAALSDSNGKKMEDVRDAIVRERERLF 293 (375)
T ss_pred -eeehhhhhhhcCcceeEeecccccHHHHHHHHhccCCccccch----hHHHHHHhcCcccchHHHHHHHHHHHHHHHHH
Confidence 267889999999776 9999999999988766666655432 2233444432 11122335666667777787
Q ss_pred HHhhcccccCCeE-EeccCCCCeEEEEecCCcchHHHHHHHHHHH-HHHHHcCeeEeccccCccccCCCCCeEEEEecCC
Q psy15447 354 SLLSQHKVTQRFL-VQGHRDTPLKYLYLQKSDDEVASKKLLQTIC-DMCIQAGFAITCPSHLDQEAKKQKPSIRITCNIS 431 (457)
Q Consensus 354 ~~L~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~ 431 (457)
+.|.+ ++++. +++....+++.+++.+.... .+..+. +.+.+.||.++-.+- ...-.+++||+..
T Consensus 294 keLt~---v~~~~~~~gg~daNFiLi~v~~~~n~-----~akkly~q~at~~gVvVRfrgs----e~~c~G~lRitvG-- 359 (375)
T KOG0633|consen 294 KELTE---VPFLNDYPGGSDANFILIEVTGGDNG-----MAKKLYKQDATKMGVVVRFRGS----EEGCKGYLRITVG-- 359 (375)
T ss_pred HHhhc---CccccCCCCcccccEEEEEEcCCCcH-----HHHHHHHHHHHhcceEEEEcCC----ccccceeEEEEcC--
Confidence 88888 44443 34455677888877654311 333444 444566999875431 0123679999996
Q ss_pred CCHHHHHHHHHHHHHH
Q psy15447 432 HTEQDMNSLIETLCKS 447 (457)
Q Consensus 432 ~t~edi~~~~~~l~~~ 447 (457)
|+|+-+-+++.++++
T Consensus 360 -t~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 360 -TPEENTVLMKCLKQF 374 (375)
T ss_pred -CcccchHHHHHHHhh
Confidence 788888888888765
No 353
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.71 E-value=3.3e-16 Score=136.38 Aligned_cols=160 Identities=20% Similarity=0.261 Sum_probs=123.5
Q ss_pred HHHHHHHHHhhc--CCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHH-HHHHhcCCeEEEecCCCH----HHH
Q psy15447 127 HLDLENDIASFM--GLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQ-TGLIASRCKVQYFKHNNM----QHL 199 (457)
Q Consensus 127 ~~~l~~~la~~~--g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~-~~~~~~g~~~~~~~~~d~----~~l 199 (457)
+.++++.+++++ +.+.++++++|++|+..++.++.++++.|++..+.|.+.. ......|.++..++.++- .++
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~ 81 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDV 81 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCccchhh
Confidence 467899999999 8888999999999999999999888999999988887777 777888988888775421 111
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV 279 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~ 279 (457)
+...+... ..++++++++++++++|...|+++|+++|+++|+++|+|++++.+..+..+ .+....++
T Consensus 82 ~~~~~~~~-------~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~------~~~~~~~~ 148 (170)
T cd01494 82 AILEELKA-------KPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPG------VLIPEGGA 148 (170)
T ss_pred hhhhhccc-------cCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccc------cccccccC
Confidence 12111111 256789999999999999999999999999999999999999876554211 11222356
Q ss_pred cEEEecCcccccCc-ccEEEe
Q psy15447 280 DMIIGSLEHALGSV-GGFCVG 299 (457)
Q Consensus 280 Di~~~s~sK~lg~~-gG~v~~ 299 (457)
|+++.|++|++|+. +|+++.
T Consensus 149 d~~~~s~~K~~~~~~~G~l~~ 169 (170)
T cd01494 149 DVVTFSLHKNLGGEGGGVVIV 169 (170)
T ss_pred CEEEEEcccccCCCceEEEEe
Confidence 99999999999854 477765
No 354
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.71 E-value=5e-17 Score=152.57 Aligned_cols=259 Identities=15% Similarity=0.146 Sum_probs=172.2
Q ss_pred EeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCC
Q psy15447 84 NFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKR 163 (457)
Q Consensus 84 d~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~ 163 (457)
||.|-+ ++|++.+++.+... | .. .||..+...+|++++++++|.+.++|+.||+.||..+++++++|
T Consensus 1 Df~SD~-----~~~~m~~a~~~a~~--g-----d~-~Yg~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~~~ 67 (290)
T PF01212_consen 1 DFRSDT-----PTPAMLEAMAAANV--G-----DD-AYGEDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHLRP 67 (290)
T ss_dssp EES-SS-----S-HHEEHHHHHTTS--B------C-CTTSSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHHHT
T ss_pred CCCccC-----CCHHHHHHHHcccc--C-----Cc-ccCCChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHhc
Confidence 666644 58999999844332 1 22 47889999999999999999999999999999999999999999
Q ss_pred CCEEEEeCcccHHHHH--HH-HhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC-CCCCC
Q psy15447 164 NDAVFVDENINFAIQT--GL-IASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN-SADIC 234 (457)
Q Consensus 164 gd~v~~~~~~h~~~~~--~~-~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~-~G~i~ 234 (457)
++.|+.....|..... +. .++|.++..++. .++++|++.+..... +. .++++|.+|...+. +|.+.
T Consensus 68 ~~~vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~---h~--~~~~~v~le~t~~~~GG~~~ 142 (290)
T PF01212_consen 68 GESVICADTAHIHFDETGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGA---HH--PQPAVVSLENTTELAGGTVY 142 (290)
T ss_dssp TEEEEEETTEHHHHSSTTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTG---TS--GGEEEEEEESSBTTTTSB--
T ss_pred CCceeccccceeeeeccchhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccc---cC--CCccEEEEEecCcCCCCeeC
Confidence 9999999999876542 33 568888877653 369999999987542 11 46788899988875 47777
Q ss_pred C---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC-cccEEEecHHHHHHHHhh
Q psy15447 235 P---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS-VGGFCVGSSYIIEHHRLS 310 (457)
Q Consensus 235 ~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~-~gG~v~~~~~~~~~~~~~ 310 (457)
+ +++|.++|++||+.|++|.+.-+-.....+..+.+.. ..+|++..|++|.+|. .|+++++++++++..+..
T Consensus 143 s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~----~~~D~v~~~~tK~~g~~~Gavl~~~~~~i~~~~~~ 218 (290)
T PF01212_consen 143 SLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIA----AGADSVSFGGTKNGGAPGGAVLAGNKEFIAKARRQ 218 (290)
T ss_dssp -HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH----TTSSEEEEETTSTT-SSSEEEEEESHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHh----hhCCEEEEEEEcccccccceEEEechHHHHHHHHH
Confidence 7 6788889999999999999853221111111122222 3568999999999986 467889999876654322
Q ss_pred CC---cceecCCCcHHHHH--HH-HHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC
Q psy15447 311 GS---GYCFSASLPPFLAV--AA-NKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR 371 (457)
Q Consensus 311 ~~---~~~~~~~~~~~~~a--aa-~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~ 371 (457)
.. +-.... . +.++ .- ..++..++....+..+..++++++.+.|+. .+..+..+.
T Consensus 219 ~k~~gg~~~~~-G--~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~----~~~~~~~~~ 278 (290)
T PF01212_consen 219 RKRLGGGMRQA-G--VLAAAELYQFAALRALELWLERARHANAMAKRLAAGLEA----LGGVLPRPV 278 (290)
T ss_dssp HHHHTHHHHHT-T--HHHHHHHHHHHHHCHEECSHHHHHCHHHHHHCHHHCHHE----ECEEEETTS
T ss_pred HHHhccCeeec-c--eeeeechhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH----CCCcccCCC
Confidence 11 111111 1 2222 01 123333343334566777889999999988 555554443
No 355
>KOG2862|consensus
Probab=99.70 E-value=7.7e-14 Score=125.60 Aligned_cols=290 Identities=15% Similarity=0.073 Sum_probs=196.1
Q ss_pred HHHHHHHHHhhcCCC---cEEEecccHHHHHHHHHhhcCCCCEEEEe-CcccHH-HHHHHHhcCCeEEEecCC-----CH
Q psy15447 127 HLDLENDIASFMGLE---ETALYSFGFSTSASAIAAYVKRNDAVFVD-ENINFA-IQTGLIASRCKVQYFKHN-----NM 196 (457)
Q Consensus 127 ~~~l~~~la~~~g~~---~~i~~~sG~~a~~~ai~a~~~~gd~v~~~-~~~h~~-~~~~~~~~g~~~~~~~~~-----d~ 196 (457)
..++.+-+...|... ..++..+|..+.++|+-.+..|||.|++- .+.++. ..+-.+..|+++..++.. .+
T Consensus 52 m~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~l 131 (385)
T KOG2862|consen 52 MDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAVPL 131 (385)
T ss_pred HHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecCcccCccH
Confidence 344444555555433 23566789999999999999999977653 334433 334566778888777532 68
Q ss_pred HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC-hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCC
Q psy15447 197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP-LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVS 275 (457)
Q Consensus 197 ~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~-l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~ 275 (457)
+.+++.+.++ +..+|.+.+.-+.||...| +...-++|++|+++|++|.+.|.|... ...+.
T Consensus 132 e~i~~~lsqh----------~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~----F~mDe---- 193 (385)
T KOG2862|consen 132 EEITEKLSQH----------KPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTE----FEMDE---- 193 (385)
T ss_pred HHHHHHHHhc----------CCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCcc----ceehh----
Confidence 8999999874 3467777788888999999 778889999999999999998876432 22333
Q ss_pred CCCccEEEecCcccccCcc--cEEEecHHHHHHHHhhCCc---c------------------eecCCCcHHHHHHHHHHH
Q psy15447 276 TEEVDMIIGSLEHALGSVG--GFCVGSSYIIEHHRLSGSG---Y------------------CFSASLPPFLAVAANKAL 332 (457)
Q Consensus 276 ~~~~Di~~~s~sK~lg~~g--G~v~~~~~~~~~~~~~~~~---~------------------~~~~~~~~~~~aaa~a~l 332 (457)
.++|+....-.|++|.+. +.+..++...+.++..... + .|..+.|........++|
T Consensus 194 -wgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL 272 (385)
T KOG2862|consen 194 -WGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAAL 272 (385)
T ss_pred -hcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHH
Confidence 455888878899998654 4577788888887643321 1 112234555556667788
Q ss_pred HHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC---CCCe-EEEEecCCcchHHHHHHHHHHHHHHHHc-Ce
Q psy15447 333 HLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR---DTPL-KYLYLQKSDDEVASKKLLQTICDMCIQA-GF 405 (457)
Q Consensus 333 ~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~---~~~~-~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi 405 (457)
+.+-++ ++..++.++++++++..|++ .|++..... ..|. -.+.++... +-.+++.+++++ ++
T Consensus 273 ~~I~eeGL~~~~~rH~e~s~~l~~~l~~----~GLq~fv~~e~~rlptvttv~vp~gv-------Dw~dVv~~~~~~~~v 341 (385)
T KOG2862|consen 273 ALIAEEGLENSWRRHREMSKWLKLSLEA----LGLQLFVVDEELRLPTVTTVKVPYGV-------DWKDVVAYAMSHYVV 341 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH----hCccceecChhhccCcceeeecCCCC-------CHHHHHHHHHHhcCE
Confidence 776554 56788999999999999998 565442211 1222 223333322 446889999998 55
Q ss_pred eEeccccCccccCCCCCeEEEEecCC-CCHHHHHHHHHHHHHHHHHh
Q psy15447 406 AITCPSHLDQEAKKQKPSIRITCNIS-HTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 406 ~v~~~~~~~~~~~~~~~~lRi~~~~~-~t~edi~~~~~~l~~~~~~~ 451 (457)
.+..+.. +..+-++||....+ -+.+-|+..++.|+.++.+.
T Consensus 342 ei~gglg-----~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~ 383 (385)
T KOG2862|consen 342 EIGGGLG-----PTVGKVFRIGLLGCNANVEYIDNVVELLKLALQRK 383 (385)
T ss_pred EeccccC-----CCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhhc
Confidence 5544433 33467899986433 46788999999998887654
No 356
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.70 E-value=7.2e-15 Score=156.77 Aligned_cols=320 Identities=10% Similarity=0.059 Sum_probs=207.5
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcC-CCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNG-VGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSAS 155 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~-~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ 155 (457)
++-+.+|.+.++.++--++.+.+++.+-..-|. .++.-+...+|..+...+++..+++++|.+ .+-++.+++.+.+.
T Consensus 101 N~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea 180 (993)
T PLN02414 101 NKVFKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEA 180 (993)
T ss_pred CCccccccCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHH
Confidence 344677777766666444556577776554332 223223334677778889999999999976 46777788877666
Q ss_pred HHHhh-cC--CCCEEEEeCcccHHHHHHHH----hcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447 156 AIAAY-VK--RNDAVFVDENINFAIQTGLI----ASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM 228 (457)
Q Consensus 156 ai~a~-~~--~gd~v~~~~~~h~~~~~~~~----~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~ 228 (457)
++.+. .+ +++.|++++..|+++...++ ..|.++..++..+.+ ... +.+..++ .+.-+
T Consensus 181 ~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~-------~~~--------~~v~~vl-vq~P~ 244 (993)
T PLN02414 181 MAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFD-------YSS--------GDVCGVL-VQYPA 244 (993)
T ss_pred HHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhc-------ccc--------CceEEEE-EecCC
Confidence 65544 23 44789999999999776553 357788877653311 111 2233443 33444
Q ss_pred CCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc------cEEEecHH
Q psy15447 229 NSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG------GFCVGSSY 302 (457)
Q Consensus 229 ~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g------G~v~~~~~ 302 (457)
.+|.+.|+++|.++||++|+++++ .++..+..+-. .....++||++++.+|+.++.| ||++.+++
T Consensus 245 ~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~--------~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~ 315 (993)
T PLN02414 245 TDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLK--------PPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQE 315 (993)
T ss_pred CCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCC--------CHhhccCcEEEECCCccccCCCCCCCCeeEEEECHH
Confidence 689999999999999999999999 66655432210 1111356999999999983322 88999888
Q ss_pred HHHHHHhh--C--------Ccce-----------e-cCCCcHHHHHHHHHHHH-----HH--hhCcHHHHHHHHHHHHHH
Q psy15447 303 IIEHHRLS--G--------SGYC-----------F-SASLPPFLAVAANKALH-----LL--KANPSLLTKLREKCNTMH 353 (457)
Q Consensus 303 ~~~~~~~~--~--------~~~~-----------~-~~~~~~~~~aaa~a~l~-----~~--~~~~~~~~~l~~~~~~l~ 353 (457)
+.+.+... + ..+. + .++.|.....+..+++. ++ ....+..+++.+++.+++
T Consensus 316 ~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~ 395 (993)
T PLN02414 316 YKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFA 395 (993)
T ss_pred HHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH
Confidence 76644210 0 1110 0 11234433333333332 11 112356788889999999
Q ss_pred HHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCC
Q psy15447 354 SLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHT 433 (457)
Q Consensus 354 ~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t 433 (457)
+.|++ .|+++..++....+.+.+++ ..++.++|.++||.++... .+.+|+|++..+|
T Consensus 396 ~~L~~----~G~~~~~~~~f~~vt~~~~~----------~~~v~~~L~~~gI~l~~~~---------~~~lrvs~~e~~T 452 (993)
T PLN02414 396 AGLKK----LGFQVQSLPFFDTVKVKCSD----------ADAIADAAAKVGINLRVVD---------ANTVTVSFDETTT 452 (993)
T ss_pred HHHhh----cCCccCCCCCcCeEEEecCC----------HHHHHHHHHHCCCeeEEec---------CCeEEEEeeccCC
Confidence 99987 67777544434455555432 2578999999999876542 3679999999999
Q ss_pred HHHHHHHHHHHHH
Q psy15447 434 EQDMNSLIETLCK 446 (457)
Q Consensus 434 ~edi~~~~~~l~~ 446 (457)
++|||+++++|..
T Consensus 453 ~edId~L~~~l~~ 465 (993)
T PLN02414 453 LEDVDKLFKVFAG 465 (993)
T ss_pred HHHHHHHHHHHcc
Confidence 9999999999963
No 357
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.69 E-value=2.6e-14 Score=129.48 Aligned_cols=323 Identities=15% Similarity=0.078 Sum_probs=204.6
Q ss_pred cCCCCChhhHHHHHHHHHhcCCCCCCCCC--cccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhc--CCC
Q psy15447 91 LSFVENPDIEKCAIDCIDKNGVGSCGPRG--FYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYV--KRN 164 (457)
Q Consensus 91 l~~~~~p~i~~a~~~~l~~~~~~~~~~~~--~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~--~~g 164 (457)
+|..++....+..+...++|+...-.+-+ -....+.-+.|-.+||-+.|.. +++++.+-+--+...+.+.. .+|
T Consensus 40 LGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~ 119 (407)
T COG3844 40 LGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEG 119 (407)
T ss_pred cccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCC
Confidence 45544444555555556666543222222 2234567788999999999954 44444444433344444443 347
Q ss_pred CEEEEeCcccHHHH-----HHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHH
Q psy15447 165 DAVFVDENINFAIQ-----TGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDI 239 (457)
Q Consensus 165 d~v~~~~~~h~~~~-----~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i 239 (457)
+.|++.+...+.+- .-+.+.+......-...++++++.+. +.+++|++.+++--||...++.+|
T Consensus 120 r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P~~~~~~~~-----------dd~AvV~L~~V~y~TGql~dm~ai 188 (407)
T COG3844 120 RRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAPRALEEAIT-----------DDVAVVLLSHVNYKTGQLLDMRAI 188 (407)
T ss_pred ceEEeecCCCCCcchhhhcchhhhhcccccceeeeChHHHHHhhc-----------cceEEEEeccccccccceeeHHHH
Confidence 77777665433211 11223232111111235777877775 467899999999899999999999
Q ss_pred HHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcc--cEEEecHHHHHHH---------
Q psy15447 240 LSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVG--GFCVGSSYIIEHH--------- 307 (457)
Q Consensus 240 ~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~g--G~v~~~~~~~~~~--------- 307 (457)
-+++++||++++-|=+|+.|.+.- .+...++|+-++|-.|.+ |++| +++...++..+..
T Consensus 189 T~~AH~~galv~wDLAHsaGavp~---------~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~g 259 (407)
T COG3844 189 TALAHQHGALVGWDLAHSAGAVPV---------DLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWG 259 (407)
T ss_pred HHHHHhcCceEEeehhcccCCcce---------eecccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccC
Confidence 999999999999999999887642 122356689999999999 4455 3444333222221
Q ss_pred -----------HhhCCcceecCC-CcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC-
Q psy15447 308 -----------RLSGSGYCFSAS-LPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD- 372 (457)
Q Consensus 308 -----------~~~~~~~~~~~~-~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~- 372 (457)
........|-.+ .+-+.+++...+|++.... .+++++.-.+.++|.+.++......++++..+..
T Consensus 260 ha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~ 339 (407)
T COG3844 260 HARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAH 339 (407)
T ss_pred CCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchh
Confidence 000011112222 3444445555678887654 4677788888999999888754344677665432
Q ss_pred ---CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe-cCCCCHHHHHHHHHHHHHHH
Q psy15447 373 ---TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC-NISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 373 ---~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~ 448 (457)
+..+.+..+ ...++.+.|.++||+..- ..++.+||.+ |++.+-.|+=..+++|.+++
T Consensus 340 ~~rGsqvS~~hp----------~~~~V~qaLi~rGVigD~---------R~P~vlRfgftPlY~~~~DVw~AV~~L~evL 400 (407)
T COG3844 340 EERGSQVSLYHP----------HGYQVMQALIDRGVIGDF---------REPDVLRFGFTPLYVSFVDVWDAVDALEEVL 400 (407)
T ss_pred hhccceeeEecC----------cHHHHHHHHHHcCccccc---------cCCCeeeecCccceechhHHHHHHHHHHHHH
Confidence 445555444 345899999999997542 2358999998 68889999999999999999
Q ss_pred HHhc
Q psy15447 449 DIAV 452 (457)
Q Consensus 449 ~~~~ 452 (457)
+...
T Consensus 401 ~t~a 404 (407)
T COG3844 401 DTLA 404 (407)
T ss_pred Hhhc
Confidence 8764
No 358
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.67 E-value=9.5e-14 Score=124.34 Aligned_cols=340 Identities=13% Similarity=0.125 Sum_probs=203.1
Q ss_pred eEEeecCCccCCCCChhhHHHHHHHHHhc------CCCCCCCCCcccChHHHHHHHHHHHhhcCC---CcEEEecccHH-
Q psy15447 82 CINFATHNYLSFVENPDIEKCAIDCIDKN------GVGSCGPRGFYGTNVVHLDLENDIASFMGL---EETALYSFGFS- 151 (457)
Q Consensus 82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~------~~~~~~~~~~~g~~~~~~~l~~~la~~~g~---~~~i~~~sG~~- 151 (457)
.+.+.++|+.- -|++.+..++...+. +-.-|.+...+|...+...|...|.+-+|. ++.+..++|++
T Consensus 32 ~imLggGNPa~---iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs 108 (417)
T COG3977 32 AIMLGGGNPAR---IPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQS 108 (417)
T ss_pred ceeeCCCCccc---ChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccc
Confidence 55566655432 367776666554432 222344555677788888888888888884 35677777774
Q ss_pred HHHHHHHhhcCC---C--CEEEE-eCcccHHHHHHHHhcCCeEEEec-------------CCCHHHHHHHHHhhchhccc
Q psy15447 152 TSASAIAAYVKR---N--DAVFV-DENINFAIQTGLIASRCKVQYFK-------------HNNMQHLEELLRQQDERDTL 212 (457)
Q Consensus 152 a~~~ai~a~~~~---g--d~v~~-~~~~h~~~~~~~~~~g~~~~~~~-------------~~d~~~le~~l~~~~~~~~~ 212 (457)
+...+...+.++ | +.|+. -.+.|..+.+.. +.+--.+.++ +.|.++|+-
T Consensus 109 ~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~-l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i----------- 176 (417)
T COG3977 109 AFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAG-LEEDLFVSAKPNIELLPAGQFKYHVDFEHLHI----------- 176 (417)
T ss_pred hHHHHHHHhcCccCCCcceeEeeccChhhccccccc-cCccceeeccCCcccccccceeeccCHHHccc-----------
Confidence 555555554332 2 23333 233332222111 1110011111 235555532
Q ss_pred CCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccc
Q psy15447 213 NSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHA 289 (457)
Q Consensus 213 ~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~ 289 (457)
.+.+.+|++.-+.||||.+.. +.+|-+++++||+.||+|.+|+...-+-...-....|+ ++ -|.+.|+||.
T Consensus 177 --~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~---~N-iilC~SLSK~ 250 (417)
T COG3977 177 --GESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWN---EN-IILCMSLSKL 250 (417)
T ss_pred --ccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccCC---CC-EEEEeehhhc
Confidence 145679999999999999865 77888899999999999999875432211111222333 22 3677899996
Q ss_pred c--cCcccEEEecHHHHHHHHhhCCcc-eecCCCcHHHHHHHHHH--HHHHhhC---cHHHHHHHHHHHHHHHHhhcccc
Q psy15447 290 L--GSVGGFCVGSSYIIEHHRLSGSGY-CFSASLPPFLAVAANKA--LHLLKAN---PSLLTKLREKCNTMHSLLSQHKV 361 (457)
Q Consensus 290 l--g~~gG~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~aaa~a~--l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~ 361 (457)
= |.+.|.++++++++..+.+...-. ...+.+-|..++-.+.. |..+.++ +-.+++.+.....+++.|-+
T Consensus 251 GLPG~R~GIiIane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~--- 327 (417)
T COG3977 251 GLPGSRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPE--- 327 (417)
T ss_pred CCCCcceeEEEccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCc---
Confidence 2 344599999999999886543221 12223344333434333 2222221 22345556666666666665
Q ss_pred cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc----ccCCCCCeEEEEecCCCCHHHH
Q psy15447 362 TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ----EAKKQKPSIRITCNISHTEQDM 437 (457)
Q Consensus 362 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~----~~~~~~~~lRi~~~~~~t~edi 437 (457)
..+.+..+.+.-+.|+.+++-. .....+.++|.++|+++.|+.++-+ +++-...++|++.. -+++.|
T Consensus 328 -~~~~iHkpEGAIFlWLWf~dLP------Itt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~--~~~~~i 398 (417)
T COG3977 328 -YRCLIHKPEGAIFLWLWFKDLP------ITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYV--PEPEKI 398 (417)
T ss_pred -cceeeecCCcceeehhhhccCC------CCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecC--CCHHHH
Confidence 4555654444444566665432 1567899999999999999887544 23333678999875 489999
Q ss_pred HHHHHHHHHHHHHhcCC
Q psy15447 438 NSLIETLCKSHDIAVQP 454 (457)
Q Consensus 438 ~~~~~~l~~~~~~~~~~ 454 (457)
++.+.+|.+..+.+.+.
T Consensus 399 e~Gva~lae~ve~~yq~ 415 (417)
T COG3977 399 EKGVAILAEEVERAYQE 415 (417)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999888877654
No 359
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.67 E-value=7.6e-14 Score=135.59 Aligned_cols=288 Identities=11% Similarity=0.075 Sum_probs=185.7
Q ss_pred hHHHHHHHHHHHhhcCCC---cE-EEecccHHHHHHHHHhhc-CCCCEEEEeCcccHHH-H-HHHHhcCC-eEEEe--cC
Q psy15447 124 NVVHLDLENDIASFMGLE---ET-ALYSFGFSTSASAIAAYV-KRNDAVFVDENINFAI-Q-TGLIASRC-KVQYF--KH 193 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~---~~-i~~~sG~~a~~~ai~a~~-~~gd~v~~~~~~h~~~-~-~~~~~~g~-~~~~~--~~ 193 (457)
.+...+..+.|.++++.+ .+ ++..||+.+.++++..+. ++|+.+++.. .++.- . ..++..|. ++..+ +.
T Consensus 38 ~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~~~ 116 (374)
T TIGR01365 38 KEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWVTDVTKQLKLPDVRVLEAEY 116 (374)
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHHHHHHHhcCCCCcEEEcCCC
Confidence 567778889999999853 24 445789999999999988 5887777765 44443 3 44555666 34433 32
Q ss_pred ---CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcccc
Q psy15447 194 ---NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTE 270 (457)
Q Consensus 194 ---~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~ 270 (457)
.|+++++. + .. |.+.+.-..+|...|++++...+ +++++|+|.+.++|..
T Consensus 117 g~~~~~~~ve~---~----------~~---v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~--------- 169 (374)
T TIGR01365 117 GKLPDLKKVDF---K----------ND---VVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQ--------- 169 (374)
T ss_pred CCCCCHHHcCC---C----------CC---EEEecCCCchheecccccccccc--CCCcEEEEccchhcCC---------
Confidence 25666651 1 11 33444445689999987555322 5899999999887643
Q ss_pred ccCCCCCCccEEEecCcccccCcc--cEEEecHHHHHHHHhhCC-----c--------------ce-ecC-CCcHHHHHH
Q psy15447 271 YFGVSTEEVDMIIGSLEHALGSVG--GFCVGSSYIIEHHRLSGS-----G--------------YC-FSA-SLPPFLAVA 327 (457)
Q Consensus 271 ~~~~~~~~~Di~~~s~sK~lg~~g--G~v~~~~~~~~~~~~~~~-----~--------------~~-~~~-~~~~~~~aa 327 (457)
.++.+++|+++.+-.|++|+++ ++++.+++.++....... . .. .+. +++.....+
T Consensus 170 --~l~~d~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a 247 (374)
T TIGR01365 170 --DLDYHKLDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVED 247 (374)
T ss_pred --CCChhHCcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHH
Confidence 2233468999999999998655 467888877766442110 0 00 111 123333444
Q ss_pred HHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCC-eEEecc---CCCCe-EEEEecCCcc----hHHHHHHHHH
Q psy15447 328 ANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQR-FLVQGH---RDTPL-KYLYLQKSDD----EVASKKLLQT 395 (457)
Q Consensus 328 a~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~-~~~~~~---~~~~~-~~i~~~~~~~----~~~~~~~~~~ 395 (457)
+..+++.++++ +.+.++.+++++.+++.+++ .| +.+... ..++. ..+.+..+.. .........+
T Consensus 248 ~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~----lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~ 323 (374)
T TIGR01365 248 WLDALKWAESIGGLKPLIARADDNLAVLEAFVAK----NNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKE 323 (374)
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHH
Confidence 55666655442 56788999999999999999 55 555432 23443 3344433210 0000101467
Q ss_pred HHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 396 ICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 396 ~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
+.+.|.++||.+.++.+. ..+..+||..-..++++|++.++++|+=+.++
T Consensus 324 ~~~~l~~~gi~i~~G~~~-----~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~~ 373 (374)
T TIGR01365 324 LISTLEKEGVAYDIGSYR-----DAPSGLRIWCGATVEKSDLECLCPWLDWAFAL 373 (374)
T ss_pred HHHHHHHCCEEEeccccc-----cCCCceEEecCCcCCHHHHHHHHHHHHHHHhc
Confidence 899999999988876642 22478999998889999999999999876654
No 360
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.66 E-value=7.6e-14 Score=138.82 Aligned_cols=291 Identities=15% Similarity=0.159 Sum_probs=187.0
Q ss_pred ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-Cc--EEEecccHHHHHHHHHhhcC-----C----
Q psy15447 96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-EE--TALYSFGFSTSASAIAAYVK-----R---- 163 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~~--~i~~~sG~~a~~~ai~a~~~-----~---- 163 (457)
++...+++...+.+.... ...+.++.....++-..++++++. +. ..++++|++||..++.+... .
T Consensus 75 ~~~a~~~~~~~~~~nl~d---~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~ 151 (460)
T COG0076 75 PPVAAELLVSALNKNLGD---PDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAES 151 (460)
T ss_pred HHHHHHHHHHHHhhcCCC---cccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcc
Confidence 455666666666552111 111224555566666667777775 33 47889999999988765321 1
Q ss_pred -----CCEEEEeCcccHHHHHHHHhcCCeEEEec------CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCC
Q psy15447 164 -----NDAVFVDENINFAIQTGLIASRCKVQYFK------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD 232 (457)
Q Consensus 164 -----gd~v~~~~~~h~~~~~~~~~~g~~~~~~~------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~ 232 (457)
...|+++..+|.+..+++.+.|.....++ ..|++++++.+.+... .. +|+....+.++|.
T Consensus 152 ~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~-------~g--~vV~~aGtT~~G~ 222 (460)
T COG0076 152 GKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTI-------GG--VVVGTAGTTDTGS 222 (460)
T ss_pred cccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCccccCHHHHHHHHHhhcc-------Cc--eEEEEecCCCCCc
Confidence 11689999999999999999986654433 2389999999987552 11 4666666678999
Q ss_pred CCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcccc-ccCCCCCCccEEEecCcccccC--cccEE-EecH-HHHHHH
Q psy15447 233 ICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTE-YFGVSTEEVDMIIGSLEHALGS--VGGFC-VGSS-YIIEHH 307 (457)
Q Consensus 233 i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~-~~~~~~~~~Di~~~s~sK~lg~--~gG~v-~~~~-~~~~~~ 307 (457)
+.|+++|.++|++||+++++|.|++...+.-. ..... .+++ +.+|.++.++||.+.. ..|++ +-++ .+.+.+
T Consensus 223 iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~-~~~~~~~f~l--~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~ 299 (460)
T COG0076 223 IDDIEELADIAEEYGIWLHVDAAFGGFLLPFL-EPDGRWDFGL--EGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRIL 299 (460)
T ss_pred cCCHHHHHHHHHHcCCcEEEEccccceeeccc-CccchhhcCC--CCceEEEECcccccCCCCCceEEEEECHHHhhhhh
Confidence 99999999999999999999999876544211 11111 2344 5779999999999852 23555 4444 344443
Q ss_pred HhhC---C-----cceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEE
Q psy15447 308 RLSG---S-----GYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKY 377 (457)
Q Consensus 308 ~~~~---~-----~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 377 (457)
.... . .++..++-+.-..++..++++.+..+ .++.++..++++++.+.|++ ...+++..++..+++.
T Consensus 300 ~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~---~~~~e~~~~p~l~~V~ 376 (460)
T COG0076 300 IFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEK---LGDFELVNEPELPIVA 376 (460)
T ss_pred hcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHh---CCCcEeecCCccceEE
Confidence 3111 1 11111222333445555667666322 45677777999999999999 4458988888899999
Q ss_pred EEecCCcchHHHHHHHHHHHHHHHHcCeeEecc
Q psy15447 378 LYLQKSDDEVASKKLLQTICDMCIQAGFAITCP 410 (457)
Q Consensus 378 i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~ 410 (457)
+++++..+ ...+..+++.+.|-.+...
T Consensus 377 fr~~~~~~------~~~~~~~~~~~~gw~v~~~ 403 (460)
T COG0076 377 FRLKDDED------TLADLSERLDRRGWQVPAQ 403 (460)
T ss_pred EEcCCccc------chhchHHHHHhcCceeecc
Confidence 98855320 1234455565667665543
No 361
>PLN02452 phosphoserine transaminase
Probab=99.64 E-value=2e-13 Score=132.59 Aligned_cols=321 Identities=13% Similarity=0.076 Sum_probs=203.5
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhcCC---CC--CCCCCcccChHHHHHHHHHHHhhcCCC---cEEEe-cccHH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGV---GS--CGPRGFYGTNVVHLDLENDIASFMGLE---ETALY-SFGFS 151 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~---~~--~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~-~sG~~ 151 (457)
+.++|+.+ +..+ +++|.+++.+.+-.|.- +. .+.|... -.+...+.++.|.++++.+ +++++ .||+.
T Consensus 7 ~~~~f~pG-P~~l--p~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~-f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~ 82 (365)
T PLN02452 7 RVFNFSAG-PATL--PANVLAKAQAELYNWEGSGMSVMEMSHRGKE-FLSIIQKAEADLRELLDIPDNYEVLFLQGGAST 82 (365)
T ss_pred ceEeeeCC-CCCC--CHHHHHHHHHHHhcccccCccccccCCCchH-HHHHHHHHHHHHHHHhCCCCCceEEEEeCccHH
Confidence 35566542 2222 58899988887765431 10 1112111 1467788899999999864 35555 57778
Q ss_pred HHHHHHHhhcCCCCEE-EEeCcccHHHH-HHHHhcCCeEEEe--cCCC---HHHHHHHHHhhchhcccCCCCccEEEEEe
Q psy15447 152 TSASAIAAYVKRNDAV-FVDENINFAIQ-TGLIASRCKVQYF--KHNN---MQHLEELLRQQDERDTLNSKVTKKFIIVE 224 (457)
Q Consensus 152 a~~~ai~a~~~~gd~v-~~~~~~h~~~~-~~~~~~g~~~~~~--~~~d---~~~le~~l~~~~~~~~~~~~~~~~~vi~e 224 (457)
+.++++..+..+|+.+ ++..+.++.-+ +-++..|...... +..+ +-++++ ++. .+....|.+.
T Consensus 83 ~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~-~~~---------~~~~~~v~~~ 152 (365)
T PLN02452 83 QFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSE-WEL---------TPDAKFVHIC 152 (365)
T ss_pred HHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHH-cCC---------CCCCcEEEEC
Confidence 8999988888887754 44555554422 2333334322222 1111 222222 221 1245667776
Q ss_pred cCCCCCCCC-CChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHH
Q psy15447 225 GVYMNSADI-CPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSY 302 (457)
Q Consensus 225 ~v~~~~G~i-~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~ 302 (457)
+....+|.. .|++++. ++++|+|.++++|... .++ ++.++...|..|++|++| |+++.+++
T Consensus 153 hnETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~p---------idv--~~~~v~~~saqK~lGP~Gl~~v~vr~~ 215 (365)
T PLN02452 153 ANETIHGVEFKDYPDVG------NVPLVADMSSNFLSKP---------VDV--SKYGVIYAGAQKNVGPSGVTIVIIRKD 215 (365)
T ss_pred CCCCCCcEecCcccccC------CCeEEEECCccccCcc---------cCH--HHcCEEEEecccccCCCCeEEEEEcHH
Confidence 666678884 7787764 2899999999876421 222 333445569999999877 88899998
Q ss_pred HHHHHHhhCCcc-----------eecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEe
Q psy15447 303 IIEHHRLSGSGY-----------CFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQ 368 (457)
Q Consensus 303 ~~~~~~~~~~~~-----------~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~ 368 (457)
+++........+ .+ .++|.....+..++++.+++. +.+.++.+++++++++.|++ .+|+...
T Consensus 216 ~l~~~~~~~~~~~~~~~~~~~~s~~-~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~---~~G~y~~ 291 (365)
T PLN02452 216 LIGNARPITPGMLDYKIHAENDSLY-NTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDE---SNGFYVC 291 (365)
T ss_pred HHhhcccCCCchhhHHHHHhcCCcc-CChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh---CCCcccC
Confidence 887653221111 11 234556667777889888653 46778899999999999988 3455111
Q ss_pred -cc---CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447 369 -GH---RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL 444 (457)
Q Consensus 369 -~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l 444 (457)
.+ ....++.+.+++.. ...+|.+.+.++|+...++.. .. +.+|+++-..++.++++++++.+
T Consensus 292 ~~~~~~rs~~~vsF~~~~~~-------~~~~f~~~~~~~g~~~~~G~r------~~-gg~R~s~yna~~~~~v~~L~~~m 357 (365)
T PLN02452 292 PVEKSVRSLMNVPFTLGGSE-------LEAEFVKEAAKAGMVQLKGHR------SV-GGMRASIYNAMPLAGVEKLVAFM 357 (365)
T ss_pred CCChHHhCCeEEEEEcCCch-------hHHHHHHHHHHCCCcccCCcc------cc-CceEEECcCCCCHHHHHHHHHHH
Confidence 11 12346667766543 567899999999998876653 22 23999999999999999999999
Q ss_pred HHHHHH
Q psy15447 445 CKSHDI 450 (457)
Q Consensus 445 ~~~~~~ 450 (457)
++..+.
T Consensus 358 ~~f~~~ 363 (365)
T PLN02452 358 KDFQAK 363 (365)
T ss_pred HHHHHh
Confidence 987654
No 362
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.64 E-value=1.1e-13 Score=148.44 Aligned_cols=280 Identities=12% Similarity=0.081 Sum_probs=187.1
Q ss_pred CCcccChHHHHHHHHHHHhhcCCCc--EEEecccHHHHHHHHHhh-cCC--CCEEEEeCcccHHHHHHH----HhcCCeE
Q psy15447 118 RGFYGTNVVHLDLENDIASFMGLEE--TALYSFGFSTSASAIAAY-VKR--NDAVFVDENINFAIQTGL----IASRCKV 188 (457)
Q Consensus 118 ~~~~g~~~~~~~l~~~la~~~g~~~--~i~~~sG~~a~~~ai~a~-~~~--gd~v~~~~~~h~~~~~~~----~~~g~~~ 188 (457)
-..+|..+...++++.+++++|.+. +-++.+++.+.+.++.++ .++ ++.|++++..|+++...+ +..|.++
T Consensus 114 EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev 193 (954)
T PRK05367 114 EISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEV 193 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEE
Confidence 3456788888999999999999874 467777777666555554 233 489999999999977553 4568888
Q ss_pred EEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcc
Q psy15447 189 QYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGV 268 (457)
Q Consensus 189 ~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~ 268 (457)
+.++..+ +++ . +.+..+++.. -+.+|.+.|+++|.++||++|+++++|..+.......
T Consensus 194 ~~~~~~~--d~~------~--------~~~~~vlvq~-p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~----- 251 (954)
T PRK05367 194 VVGDAAK--ALD------H--------DDVFGVLLQY-PGTSGEVRDYTALIAAAHARGALVAVAADLLALTLLT----- 251 (954)
T ss_pred EEecCcc--CCC------c--------ccEEEEEEec-CCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCC-----
Confidence 8887643 111 1 2344444443 4578999999999999999999999998652221221
Q ss_pred ccccCCCCCCccEEEecCccc-----ccCcc-cEEEecHHHHHHHHhhC----------Cccee------------cCCC
Q psy15447 269 TEYFGVSTEEVDMIIGSLEHA-----LGSVG-GFCVGSSYIIEHHRLSG----------SGYCF------------SASL 320 (457)
Q Consensus 269 ~~~~~~~~~~~Di~~~s~sK~-----lg~~g-G~v~~~~~~~~~~~~~~----------~~~~~------------~~~~ 320 (457)
.....++||++++.+|+ +|+++ ||++.++++.+.+.... ..+.+ .++.
T Consensus 252 ----~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTs 327 (954)
T PRK05367 252 ----PPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATS 327 (954)
T ss_pred ----ChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCccccccccccccccccccccc
Confidence 01123569999999998 55554 88999988777663110 11111 0111
Q ss_pred cHH---HHHHHHHHH--HHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHH
Q psy15447 321 PPF---LAVAANKAL--HLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLL 393 (457)
Q Consensus 321 ~~~---~~aaa~a~l--~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 393 (457)
|.. +..++.+++ .++... .+..+++..++.++.+.|++ .|+++..+.....+.+.++ . ..
T Consensus 328 Nict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~----~G~~~~~~~~f~~~~~~~~--~-------~~ 394 (954)
T PRK05367 328 NICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRA----LGLEVVHDSFFDTLTVEVG--G-------DA 394 (954)
T ss_pred ccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh----cCcccCCCCCCCeEEEeCC--C-------CH
Confidence 222 122222221 223221 35677888899999999977 6777653333344444443 2 35
Q ss_pred HHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447 394 QTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLC 445 (457)
Q Consensus 394 ~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 445 (457)
.++.++|.++||.++... .+.+|++++..+|++||++++++|.
T Consensus 395 ~~i~~~l~~~gi~~~~~~---------~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 395 AAVLARALAAGINLRRVD---------DDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred HHHHHHHHHCCceecccc---------CCEEEEEecccCCHHHHHHHHHHHc
Confidence 689999999999885432 4689999999999999999999996
No 363
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.64 E-value=1.2e-13 Score=133.28 Aligned_cols=345 Identities=14% Similarity=0.102 Sum_probs=205.0
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHh
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA 159 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a 159 (457)
--+||+-|-...+. ..++..+|+.. |- -.|+-.+...+|++..++++|.+.++++.+|..+...+++.
T Consensus 41 dV~IDLrSDTgT~a-pS~~m~aAM~~-----GD------D~Y~gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~ 108 (467)
T TIGR02617 41 DVFIDLLTDSGTGA-VTQSMQAAMMR-----GD------EAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPV 108 (467)
T ss_pred CeEEECccCCCCCC-CCHHHHHHHHc-----CC------cccccCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHh
Confidence 45789987654332 25667766664 21 12334555689999999999999999999999999999999
Q ss_pred hcC-CCCEEEEeC-------cccHHH-HHHHHhcCCeEEEe--------------c-CCCHHHHHHHHHhhchhcccCCC
Q psy15447 160 YVK-RNDAVFVDE-------NINFAI-QTGLIASRCKVQYF--------------K-HNNMQHLEELLRQQDERDTLNSK 215 (457)
Q Consensus 160 ~~~-~gd~v~~~~-------~~h~~~-~~~~~~~g~~~~~~--------------~-~~d~~~le~~l~~~~~~~~~~~~ 215 (457)
+++ +|+.+.++. .+|..+ .....++|+....+ + ..|++.+++.|++...
T Consensus 109 ~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~------- 181 (467)
T TIGR02617 109 LIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGP------- 181 (467)
T ss_pred hcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCC-------
Confidence 988 677666433 234443 34566777664432 1 2289999999986432
Q ss_pred CccEEEEEecCCCC-CCCCCC---hHHHHHHHHHcCcEEEEEcCcccc-cc-------cCCCCcccccc-CCCCCCccEE
Q psy15447 216 VTKKFIIVEGVYMN-SADICP---LKDILSLRSKYQARIFVDESVSFG-TL-------GSTGHGVTEYF-GVSTEEVDMI 282 (457)
Q Consensus 216 ~~~~~vi~e~v~~~-~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g-~~-------g~~g~~~~~~~-~~~~~~~Di~ 282 (457)
+++.++.++-.+|. +|...| +++++++|++||+.+++|.+.-+- .+ +..+....+.. .+ -+.+|.+
T Consensus 182 ~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~-~~~aDsv 260 (467)
T TIGR02617 182 NNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRET-YKYADML 260 (467)
T ss_pred CCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHh-hccCCEE
Confidence 23344444433343 566777 679999999999999999875321 11 22222221110 00 1345888
Q ss_pred EecCcccccCc-ccEEEecHH----HHHHHHhhCC---cc-eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447 283 IGSLEHALGSV-GGFCVGSSY----IIEHHRLSGS---GY-CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 283 ~~s~sK~lg~~-gG~v~~~~~----~~~~~~~~~~---~~-~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~ 353 (457)
..|++|.+|.+ ||+++++++ +.+..+.... ++ +|+ +++.--..+....|+..- +++....--+..+||.
T Consensus 261 t~slsKglgApvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYG-Glagrd~ea~a~Gl~e~~-~~~yl~~ri~qv~yl~ 338 (467)
T TIGR02617 261 AMSAKKDAMVPMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYG-GLEGGAMERLAVGLYDGM-NLDWLAYRINQVQYLV 338 (467)
T ss_pred EEEcCCCCCCcccceEEecchhHHHHHHHHHhhcccccCCcCcC-chhHHHHHHHHhhhhhcc-cHHHHHHHHHHHHHHH
Confidence 99999999865 899988865 2233332211 22 232 222222222212232221 1234444445678999
Q ss_pred HHhhcccccCCeEEeccCCCCeEEEEecCCcc-hHHHHHHHHHHHHHHH-HcCeeEeccc------cCcc-ccC-CCCCe
Q psy15447 354 SLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD-EVASKKLLQTICDMCI-QAGFAITCPS------HLDQ-EAK-KQKPS 423 (457)
Q Consensus 354 ~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~l~-~~Gi~v~~~~------~~~~-~~~-~~~~~ 423 (457)
+.|.+ .|++++. .+++-+.+....-.. .+..+.-++.++.+|- +.||-..-.+ .|.. +.. ..-+.
T Consensus 339 ~~L~~----~Gvpi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el 413 (467)
T TIGR02617 339 NGLEE----IGVVCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAEL 413 (467)
T ss_pred HHHHh----CCCcEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccce
Confidence 99998 8998886 777777664322100 0111124556666664 4466532211 1211 111 11367
Q ss_pred EEEEec-CCCCHHHHHHHHHHHHHHHHHh
Q psy15447 424 IRITCN-ISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 424 lRi~~~-~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+|+++| -..|.+++|.+++++..+.+..
T Consensus 414 ~RlaipRrvyt~~h~d~v~~~~~~~~~~~ 442 (467)
T TIGR02617 414 LRLTIPRATYTQTHMDFIIEAFKHVKENA 442 (467)
T ss_pred eeeccccccccHhHHHHHHHHHHHHHhhh
Confidence 999875 4569999999999999887654
No 364
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.62 E-value=1.3e-13 Score=136.29 Aligned_cols=287 Identities=16% Similarity=0.170 Sum_probs=180.8
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccH-HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC---------
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGF-STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--------- 193 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------- 193 (457)
.....+.++..|+.+|.++..|..+|+ .||..++.+++++||.|++++.+|-+...++-++|+..++...
T Consensus 69 ~G~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~ 148 (557)
T COG1982 69 EGPIKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGII 148 (557)
T ss_pred CccHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCcccccc
Confidence 445788899999999999998888777 6899999999999999999999999999999999988766532
Q ss_pred --CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccc
Q psy15447 194 --NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEY 271 (457)
Q Consensus 194 --~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~ 271 (457)
-+.+.+++.+.++.. ..+.+|++.|-+ .|.+..+++|+++++++++|+.+||+|+.-. +.++.. .+
T Consensus 149 ggI~~~~~~~~l~~~~~-------~~k~~vitnpTY--dGv~~n~~~i~~~~~~~~a~v~~deah~~~~-~~~~~l-~~- 216 (557)
T COG1982 149 GGIPLETFKEALLAHPD-------AEKLAVITNPTY--DGVCYNLRKIVELLHHYGAWVLYDEAHPAHF-DFSPML-PE- 216 (557)
T ss_pred CCCCHHHHHHHHHhChh-------hheeEEEecCcc--ceEeecHHHHHHHHhhcCceEEhhhcCcccc-cccccC-cc-
Confidence 267888888776542 114566666544 5899999999999999999999999987432 221111 11
Q ss_pred cCCCCCCccEEEecCcccccCc--ccEEEec-------HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC--cH
Q psy15447 272 FGVSTEEVDMIIGSLEHALGSV--GGFCVGS-------SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN--PS 340 (457)
Q Consensus 272 ~~~~~~~~Di~~~s~sK~lg~~--gG~v~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~ 340 (457)
... ....|+++.|.||.+++. +.++-.+ +.+.+.+. .++++.|.+...|.+.+-+.+... .+
T Consensus 217 ~~~-~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~------~h~STSPsY~l~ASlD~Ar~~~~~~G~~ 289 (557)
T COG1982 217 SAL-NGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALM------MHQSTSPSYPLMASLDVARMQEGNAGRE 289 (557)
T ss_pred hhh-hcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHH------HHccCCchHHHHHHHHHHHHhhhhhhHH
Confidence 111 145689999999999632 2333222 23333332 222233444444444433333322 22
Q ss_pred H----HHHHHHHHHHHHHHhhcccccCCeEEeccCC--------------------CCeEE-EEecCCcchHHHHHHHHH
Q psy15447 341 L----LTKLREKCNTMHSLLSQHKVTQRFLVQGHRD--------------------TPLKY-LYLQKSDDEVASKKLLQT 395 (457)
Q Consensus 341 ~----~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~--------------------~~~~~-i~~~~~~~~~~~~~~~~~ 395 (457)
+ .+..-+.++.+++...+ +.++.++.+.. -|+-. +..+ . .+..+..
T Consensus 290 l~~~~~~~~i~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp-~-----~Gipg~~ 360 (557)
T COG1982 290 LWQEVIDEAIDFRKALRRLINE---IGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTP-E-----FGIPGAI 360 (557)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh---cCCeeeccccccCCcccccccccccccceeccccEEEEecC-C-----CCCcHHH
Confidence 2 33444555566665555 34566554432 01111 1111 1 1125668
Q ss_pred HHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447 396 ICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLC 445 (457)
Q Consensus 396 ~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 445 (457)
+.++|+++|+....... ....+-|++....+..+++.+++..+
T Consensus 361 v~~~L~e~gii~e~~~d-------~~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 361 VAKYLREHGIIPEETGD-------YSNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred HHHHHHHcCCeeeecCC-------ceeeEEeeeccchHHHHHHHHHHHHH
Confidence 89999999987654321 12334444443556677777777766
No 365
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.59 E-value=3.7e-13 Score=131.57 Aligned_cols=245 Identities=18% Similarity=0.204 Sum_probs=156.0
Q ss_pred hHHHHHHHHHHHhhcCCC---------cEEEecccHHHHHHHHHhhcC--------------CCCEEEEeCcccHHHHHH
Q psy15447 124 NVVHLDLENDIASFMGLE---------ETALYSFGFSTSASAIAAYVK--------------RNDAVFVDENINFAIQTG 180 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~---------~~i~~~sG~~a~~~ai~a~~~--------------~gd~v~~~~~~h~~~~~~ 180 (457)
.+...++-+.+++++|.+ ..+++++|+++|..++.+..+ +.-.|++++..|.+..++
T Consensus 78 ~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Ka 157 (373)
T PF00282_consen 78 TEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKA 157 (373)
T ss_dssp HHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHH
T ss_pred ccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHh
Confidence 344455556667777755 358889999999988755421 123677888899999999
Q ss_pred HHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcC
Q psy15447 181 LIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDES 255 (457)
Q Consensus 181 ~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa 255 (457)
+.+.|..++.++.+ |+++|++.|++..+. +..+.+|+..-....+|.+.|+++|+++|++|++||++|.+
T Consensus 158 a~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~-----g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA 232 (373)
T PF00282_consen 158 ARILGLGVRKIPTDEDGRMDIEALEKALEKDIAN-----GKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAA 232 (373)
T ss_dssp HHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHT-----TEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEET
T ss_pred cceeeeEEEEecCCcchhhhHHHhhhhhcccccc-----cccceeeeccCCCcccccccCHHHHhhhccccceeeeeccc
Confidence 99999888877644 789999999875531 12233566666666799999999999999999999999999
Q ss_pred ccccc-ccCCCCccccccCCCCCCccEEEecCcccccCc--ccEEEec-HHHHHHHHhhCCcce----------------
Q psy15447 256 VSFGT-LGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV--GGFCVGS-SYIIEHHRLSGSGYC---------------- 315 (457)
Q Consensus 256 ~~~g~-~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~--gG~v~~~-~~~~~~~~~~~~~~~---------------- 315 (457)
++... +.+..+. -..++ +.+|-+..+.||.++.+ .|+++.+ +............|.
T Consensus 233 ~gg~~~~~~~~~~--~~~gi--~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~ 308 (373)
T PF00282_consen 233 YGGSALLSPEYRH--LLFGI--ERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDY 308 (373)
T ss_dssp TGGGGGGHCTTGG--GGTTG--GGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEG
T ss_pred ccccccccccccc--ccccc--ccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccccccccccc
Confidence 87532 2222221 12344 56799999999999743 3555554 333322110000111
Q ss_pred -ecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEec
Q psy15447 316 -FSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ 381 (457)
Q Consensus 316 -~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~ 381 (457)
...+ -...+...-.+++.+..+ .++.++..+++++|.+.|++ .+++++..++..+++.++++
T Consensus 309 tl~~S-R~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~---~~~~el~~~~~~~~vcFr~k 373 (373)
T PF00282_consen 309 TLQGS-RRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRK---DPRFELVNEPDLNIVCFRYK 373 (373)
T ss_dssp SSSSS-GHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---STTEEESSTTSSSEEEEEES
T ss_pred ccccc-ccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh---CCCEEEEcCCCceEEEEEeC
Confidence 1111 122222222334433322 35677788899999999998 57799987788888888753
No 366
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.57 E-value=9.4e-13 Score=124.03 Aligned_cols=306 Identities=11% Similarity=0.112 Sum_probs=196.6
Q ss_pred cccChHHHHHHHHHHHhhcCCCcEEE-ecccHH---HHHHHHHhhcC-----CCCEEEEeCcccHHHHHHHHhcCCeEEE
Q psy15447 120 FYGTNVVHLDLENDIASFMGLEETAL-YSFGFS---TSASAIAAYVK-----RNDAVFVDENINFAIQTGLIASRCKVQY 190 (457)
Q Consensus 120 ~~g~~~~~~~l~~~la~~~g~~~~i~-~~sG~~---a~~~ai~a~~~-----~gd~v~~~~~~h~~~~~~~~~~g~~~~~ 190 (457)
..|..+...+|++.|.++.|.+.+-+ -++|++ +-..+|+++.. ..+++++++..|+.....+.+.|.+++.
T Consensus 104 vqG~l~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~ 183 (496)
T COG1003 104 VQGYLELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVV 183 (496)
T ss_pred HHHHHHHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEE
Confidence 45677888999999999999997754 456664 45566777632 3468999999999999999999999999
Q ss_pred ecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC-ChHHHHHHHHHcCcEEEEEcCcccccccCC
Q psy15447 191 FKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC-PLKDILSLRSKYQARIFVDESVSFGTLGST 264 (457)
Q Consensus 191 ~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~-~l~~i~~l~~~~g~~li~DEa~~~g~~g~~ 264 (457)
++.+ |+++|++++.+ +++++++..++ .-|... .+.+|+++.+++|..|.+|.+.--..+|..
T Consensus 184 V~~~~~G~VDlddLk~k~~~-----------~~AalMiTnPs-T~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~ 251 (496)
T COG1003 184 VKCDENGNVDLDDLRAKAED-----------NLAALMITNPS-TLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLA 251 (496)
T ss_pred EecCCCCCccHHHHHHHhcc-----------ceeEEEeccCc-ccccchhhHHHHHHHHHHcCCEEEecCcchhhhhccc
Confidence 8865 79999988863 45666665544 335553 489999999999999999998654445532
Q ss_pred CCccccccCCCCCCccEEEecCcccccC------cc-cEEEecHHHHHHHHh----hC-Ccceec--------CCCcHHH
Q psy15447 265 GHGVTEYFGVSTEEVDMIIGSLEHALGS------VG-GFCVGSSYIIEHHRL----SG-SGYCFS--------ASLPPFL 324 (457)
Q Consensus 265 g~~~~~~~~~~~~~~Di~~~s~sK~lg~------~g-G~v~~~~~~~~~~~~----~~-~~~~~~--------~~~~~~~ 324 (457)
..| .+ +.|++-..+||+|+. +| |-|..++.++.++.. .. ..|... -+..++.
T Consensus 252 rPG---d~-----G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~G 323 (496)
T COG1003 252 RPG---DM-----GFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYG 323 (496)
T ss_pred ccc---cc-----ccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccC
Confidence 222 12 448888899999942 22 456666666665532 01 111100 0011111
Q ss_pred HHH-HHHHHHH---HhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHH
Q psy15447 325 AVA-ANKALHL---LKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTIC 397 (457)
Q Consensus 325 ~aa-a~a~l~~---~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~ 397 (457)
.+. ...+..+ +..+ .+.-+..--|++|+.++|+. .+++.-.+..+...-.+-+.... +.......+++
T Consensus 324 s~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~-----~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvA 398 (496)
T COG1003 324 SASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG-----YYPVPYTGENRVAHECILDARPLKKETGVRALDVA 398 (496)
T ss_pred cchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh-----cCccccCCCCcceeEEEeechHhHhhcCCcHHHHH
Confidence 111 1122222 2221 12234444578999999986 23332222222221111111100 11122567899
Q ss_pred HHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447 398 DMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQP 454 (457)
Q Consensus 398 ~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~ 454 (457)
++|++.|+......+| ....+.+.|-|+-+-|++++|++++++.++.+++...
T Consensus 399 KrLlD~GfHaPT~~FP----liV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~~ 451 (496)
T COG1003 399 KRLLDYGFHAPTMYFP----LIVAGTLMIEPTESESKEELDRFIDAMIAIREEADAV 451 (496)
T ss_pred HHHHhcCCCCCcccCc----cccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999987766654 1246889999999999999999999999998887643
No 367
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.49 E-value=3.3e-11 Score=115.98 Aligned_cols=307 Identities=11% Similarity=0.051 Sum_probs=193.5
Q ss_pred ChhhHHHHHHHHHhcCC---CC--CCCCCcccChHHHHHHHHHHHhhcCCC---cEEEec-ccHHHHHHHHHhhcCCCC-
Q psy15447 96 NPDIEKCAIDCIDKNGV---GS--CGPRGFYGTNVVHLDLENDIASFMGLE---ETALYS-FGFSTSASAIAAYVKRND- 165 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~---~~--~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~-sG~~a~~~ai~a~~~~gd- 165 (457)
+++|.+++++.+..|.. +. .+.|.. --.+...+.++.|.++++.+ ++++++ +|+.+.+++...+.++||
T Consensus 16 p~~Vl~~~~~~~~~~~~~g~si~eisHRs~-~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~~g~~ 94 (364)
T PRK12462 16 PDTVLEQVRQAVVELPETGLSVLGMSHRSS-WFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSRPGAA 94 (364)
T ss_pred CHHHHHHHHHHHhcccccCccccccccccH-HHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCCCCCc
Confidence 46888888887776532 11 111111 01567788889999999863 455555 567788888888888888
Q ss_pred EE-EEeCcccHHHH-HHHHhcC-CeEEEec-------CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC
Q psy15447 166 AV-FVDENINFAIQ-TGLIASR-CKVQYFK-------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP 235 (457)
Q Consensus 166 ~v-~~~~~~h~~~~-~~~~~~g-~~~~~~~-------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~ 235 (457)
.+ .+..+.++.-+ .-++..| .++.... ..+++.+ +. . +....|.+.+....+|...|
T Consensus 95 ~~~~~~tG~fg~r~~~ea~~~g~v~~~~~~~~~~~~~~p~~~~~----~~-~--------~d~~~v~~t~NETstGv~~~ 161 (364)
T PRK12462 95 APEYVTTGYWSRKAIGEASRVAAMRVVWDGAASGYRTLPSLAEL----DW-D--------ARAPFRHYVSNETVEGLQFP 161 (364)
T ss_pred EEEEEeCCHHHHHHHHHHHhcCCceEecCcCCCCCCcCCCHHHh----cc-C--------CCCcEEEEccCCCCceEecC
Confidence 44 45565554433 2222323 2222211 1123332 11 1 23456666666666788876
Q ss_pred hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhhCCc-
Q psy15447 236 LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLSGSG- 313 (457)
Q Consensus 236 l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~~~~- 313 (457)
++.+.++.++|+|-+.++|.. .++.++.|++..+..|++|++| ++++.+++.++........
T Consensus 162 -----~~~~~~~~llvvD~sS~~~s~-----------pid~~~~dvi~agsQKnlgP~Gltvvivs~~al~~~~~~~p~~ 225 (364)
T PRK12462 162 -----DAAGLPDSPLIADMSSDFMSR-----------PFDVEAYGMVYAHAQKNLGPAGVTVAIIRRALLERVPDTLPPM 225 (364)
T ss_pred -----cccccCCCeEEEEcCchhhCC-----------CCChHHccEEEeeccccCCCCceEEEEECHHHHhhccccCCch
Confidence 333447999999998776421 1223455899999999999766 6678888887665321111
Q ss_pred ----------ceecCCCcHHHHHHHHHHHHHHhhC----cHHHHHHHHHHHHHHHHhhcccccCCeEEe---ccCCC-Ce
Q psy15447 314 ----------YCFSASLPPFLAVAANKALHLLKAN----PSLLTKLREKCNTMHSLLSQHKVTQRFLVQ---GHRDT-PL 375 (457)
Q Consensus 314 ----------~~~~~~~~~~~~aaa~a~l~~~~~~----~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~---~~~~~-~~ 375 (457)
..+. ++|.....+...+++.+.++ +.+.++.+++++.+++.+++ ..++... ....+ ..
T Consensus 226 ldy~~~~~~~s~~n-TPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~---~~~~~~~~~~~~~RS~mn 301 (364)
T PRK12462 226 LDFRTHVEHRSNYN-TPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDA---LNEVIDCHAHRAARSTMN 301 (364)
T ss_pred hhHHHHHhcCCCCC-CchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHh---CCCcccCCCChhhcCcce
Confidence 1121 34555666667788887543 46778888999999999988 3333221 11223 34
Q ss_pred EEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 376 KYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 376 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
+.+.+.++. ...+|.+.+.++|+.-..+.. .-+.+|+++-..++.|+++++++.++++-++
T Consensus 302 v~f~~~~~~-------l~~~f~~~a~~~gl~~lkGhr-------~vgg~Ras~yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 302 VAFRFRQPR-------LDTLFKEQSTEAGFCGLSGHR-------SIGGIRASLYNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred EEEEcCCHH-------HHHHHHHHHHHCCCccccCCc-------ccCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 555666543 567899999999987654431 1356999999999999999999999987653
No 368
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.46 E-value=2.4e-11 Score=128.52 Aligned_cols=313 Identities=10% Similarity=0.138 Sum_probs=194.3
Q ss_pred eEEeecCCccCCCCChhhHHHHHHH---HHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc--EEEecccHHHHHHH
Q psy15447 82 CINFATHNYLSFVENPDIEKCAIDC---IDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE--TALYSFGFSTSASA 156 (457)
Q Consensus 82 ~id~~s~~~l~~~~~p~i~~a~~~~---l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~--~i~~~sG~~a~~~a 156 (457)
+..|.+.+|.++--+|.|.+.+.+- ...| .+.-+-..+|..+...+++..+++++|.+. +-++..++.+.+++
T Consensus 65 ~~~fig~G~y~~~~p~~i~r~v~~~p~~~Tay--tPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~ 142 (939)
T TIGR00461 65 FKSYIGMGYYGTILPPVIQRNLLENPGWYTAY--TPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAM 142 (939)
T ss_pred ccccCCCCcCCCcCChHHHHHHHhCchhhhcC--CCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHH
Confidence 4456555555544345555444321 1122 333333457888889999999999999884 46777777666655
Q ss_pred HHhhc---CCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447 157 IAAYV---KRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN 229 (457)
Q Consensus 157 i~a~~---~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~ 229 (457)
+.+.. ++++.|++++..|+.+...+ ...|.+++.+ |+++|++.+ .++.+++..++ .
T Consensus 143 ~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~---~~~~l~~~~-------------~~~~v~~q~Pn-~ 205 (939)
T TIGR00461 143 ALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVV---DCSDIKKAV-------------DVFGCLLQYPA-T 205 (939)
T ss_pred HHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEE---cHHHHhhcC-------------CEEEEEEECCC-C
Confidence 54532 33478999999999877544 3667777776 445544333 23556565444 5
Q ss_pred CCCCCChHHHHHHHHHcCcEEEEEcCc-ccccccCCCCccccccCCCCCCccEEEecCcccccC------c-ccEEEecH
Q psy15447 230 SADICPLKDILSLRSKYQARIFVDESV-SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS------V-GGFCVGSS 301 (457)
Q Consensus 230 ~G~i~~l~~i~~l~~~~g~~li~DEa~-~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~------~-gG~v~~~~ 301 (457)
.|.+.++++|.+++|++|++++++.-. +.+.+-+.| .+ ++||+++ .+|.||. + +|+++.++
T Consensus 206 ~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pg-----e~-----GaDi~vg-~~q~fg~p~g~GGP~aG~~a~~~ 274 (939)
T TIGR00461 206 DGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPG-----HY-----GADIVLG-SSQRFGVPMGYGGPHAAFFAVKD 274 (939)
T ss_pred CeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHH-----Hc-----CCcEEee-CCCccCCCCCCCCCceeeeeecH
Confidence 799999999999999999999996532 332222111 22 4589865 5665542 2 37888888
Q ss_pred HHHHHHHh----------hCCcceec------------CCCcHHHH---HHHHHH--HHHHhhC--cHHHHHHHHHHHHH
Q psy15447 302 YIIEHHRL----------SGSGYCFS------------ASLPPFLA---VAANKA--LHLLKAN--PSLLTKLREKCNTM 352 (457)
Q Consensus 302 ~~~~~~~~----------~~~~~~~~------------~~~~~~~~---aaa~a~--l~~~~~~--~~~~~~l~~~~~~l 352 (457)
++...+.- ....+..+ ++.|-... .+..++ +.++... .++.++...++.++
T Consensus 275 ~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l 354 (939)
T TIGR00461 275 EYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSIL 354 (939)
T ss_pred hhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Confidence 87776521 00112110 11111111 111122 2222211 24556677788899
Q ss_pred HHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCC
Q psy15447 353 HSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISH 432 (457)
Q Consensus 353 ~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~ 432 (457)
.+.|++ .|+++..++-...+.+.++. . .+.++.+++.++||.++... .+.+++++...+
T Consensus 355 ~~~L~~----~G~~~~~~~fF~~~~v~~~~-~-------~~~~i~~~~~~~gi~l~~~~---------~~~i~~s~~E~~ 413 (939)
T TIGR00461 355 ANGLEN----DPHELINKTWFDTLTVKVGN-G-------ISSELLKAAEEFNINLRAVD---------TTTVGIALDETT 413 (939)
T ss_pred HHHHHh----CCCcccCCCccceEEEEeCC-C-------CHHHHHHHHHHCCCeeeecC---------CCEEEEEeecCC
Confidence 999988 78887644223344444432 1 34579999999999976532 468999999999
Q ss_pred CHHHHHHHHHHHH
Q psy15447 433 TEQDMNSLIETLC 445 (457)
Q Consensus 433 t~edi~~~~~~l~ 445 (457)
|++||+.+++++.
T Consensus 414 t~~di~~l~~~~~ 426 (939)
T TIGR00461 414 TKADVENLLKVFD 426 (939)
T ss_pred CHHHHHHHHHHhc
Confidence 9999999999994
No 369
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.46 E-value=3.5e-10 Score=115.90 Aligned_cols=323 Identities=11% Similarity=0.114 Sum_probs=190.7
Q ss_pred cChHHHHHHHHHHHhhcCCCc--EEEecccHHHHHHHHHhhcCCC-----------------------------------
Q psy15447 122 GTNVVHLDLENDIASFMGLEE--TALYSFGFSTSASAIAAYVKRN----------------------------------- 164 (457)
Q Consensus 122 g~~~~~~~l~~~la~~~g~~~--~i~~~sG~~a~~~ai~a~~~~g----------------------------------- 164 (457)
.+.....++-+.|++++|.+. ..++++||.||..++-+.....
T Consensus 120 ~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~ 199 (608)
T TIGR03811 120 ATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLE 199 (608)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhccccccccccccc
Confidence 456777778888899888653 5789999999987764432110
Q ss_pred -----------------------CEEEEeCcccHHHHHHHHhcCC---eEEEecCC-----CHHHHHHHHHhhchhcccC
Q psy15447 165 -----------------------DAVFVDENINFAIQTGLIASRC---KVQYFKHN-----NMQHLEELLRQQDERDTLN 213 (457)
Q Consensus 165 -----------------------d~v~~~~~~h~~~~~~~~~~g~---~~~~~~~~-----d~~~le~~l~~~~~~~~~~ 213 (457)
-.++++...|.+..+++.+.|. .++.++.+ |+++|++.|++..++
T Consensus 200 ~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~---- 275 (608)
T TIGR03811 200 SAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAE---- 275 (608)
T ss_pred ccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhc----
Confidence 0477788889999999999986 36665532 799999999765321
Q ss_pred CCCccEEEEEecCCCCCCCCCChHHHHHHH---HHcCc--EEEEEcCccccc---c-cCCCCc-----------------
Q psy15447 214 SKVTKKFIIVEGVYMNSADICPLKDILSLR---SKYQA--RIFVDESVSFGT---L-GSTGHG----------------- 267 (457)
Q Consensus 214 ~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~---~~~g~--~li~DEa~~~g~---~-g~~g~~----------------- 267 (457)
...+.+|+..-....+|.+.|+++|.++| +++|+ ++++|.|++... + .+.+..
T Consensus 276 -g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~ 354 (608)
T TIGR03811 276 -KTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFT 354 (608)
T ss_pred -CCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccc
Confidence 12344566555566789999999999999 67887 699999997532 1 110000
Q ss_pred -----cc-----cccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcce---------------ecCC
Q psy15447 268 -----VT-----EYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGYC---------------FSAS 319 (457)
Q Consensus 268 -----~~-----~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~~---------------~~~~ 319 (457)
+. ...++ ..+|-++..+||.+.. .|++++-++.+.+.+... ..|. ..++
T Consensus 355 ~~~~~l~~~~~~~l~gl--e~ADSItvDpHK~g~~Py~~G~ll~Rd~~~~~~~~~~-a~Yl~~~~~~~p~~~g~~~legS 431 (608)
T TIGR03811 355 EKKEYISREVYNAYKAI--SEAESVTIDPHKMGYIPYSAGGIVIQDIRMRDVISYF-ATYVFEKGADIPALLGAYILEGS 431 (608)
T ss_pred cccccccHhHHHHHhcC--cCceEEEeCcccccccCCCeEEEEEeCHHHHHHHhcC-cchhccccccCcccccccceecC
Confidence 00 11133 4679999999999863 344566666655544321 1221 1122
Q ss_pred CcHHHHHHHHHHHHHH--h--hCcHHHHHHHHHHHHHHHHhhcccc---cCCeEE--eccCCCCeEEEEecCCcch--HH
Q psy15447 320 LPPFLAVAANKALHLL--K--ANPSLLTKLREKCNTMHSLLSQHKV---TQRFLV--QGHRDTPLKYLYLQKSDDE--VA 388 (457)
Q Consensus 320 ~~~~~~aaa~a~l~~~--~--~~~~~~~~l~~~~~~l~~~L~~~~~---~~~~~~--~~~~~~~~~~i~~~~~~~~--~~ 388 (457)
-+...+++.-.+++.+ . ...++..+..++++++.+.|++... .+.+++ ..++..+++.+.+...... +.
T Consensus 432 R~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~pdlniV~Fr~~~~g~~~l~~ 511 (608)
T TIGR03811 432 KAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTKPDFNMVDYVFNEKGNDDLVK 511 (608)
T ss_pred CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCCCCcceEEEEEecCCCccHHH
Confidence 1222233333455555 2 1245777888889999999877311 133454 4456777777776532211 22
Q ss_pred HHHHHHHHHHHHH-------HcCeeEeccccCcc-------------ccC-----C--CCCeEEEEe--cCCCCHHHHHH
Q psy15447 389 SKKLLQTICDMCI-------QAGFAITCPSHLDQ-------------EAK-----K--QKPSIRITC--NISHTEQDMNS 439 (457)
Q Consensus 389 ~~~~~~~~~~~l~-------~~Gi~v~~~~~~~~-------------~~~-----~--~~~~lRi~~--~~~~t~edi~~ 439 (457)
......++.+++. +.-++++...+... +.. . .-..+|-++ |....++.++.
T Consensus 512 ~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~~~~~~yg~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~m~p~~~~~~~~~~ 591 (608)
T TIGR03811 512 MNKLNHAFYDYASYVKGSIYNNEFITSHTDFAIPDYGDSPFAFVNSLGFSDEEWQRAGKVTILRASVMTPYMNDKENFDE 591 (608)
T ss_pred HHHHHHHHHHhhccccCCCCCcceEeeecccccchhhhhHHHHHHHcCCChhhhccCCceEEEEEEecCcccCChhhHHH
Confidence 2223444555544 11233322111100 000 0 012467665 44455678888
Q ss_pred HHHHHHHHHHHhc
Q psy15447 440 LIETLCKSHDIAV 452 (457)
Q Consensus 440 ~~~~l~~~~~~~~ 452 (457)
+.+.|++++.+..
T Consensus 592 ~~~~~~~~~~~~~ 604 (608)
T TIGR03811 592 YAPKIKAAMQEKL 604 (608)
T ss_pred HHHHHHHHHHHHH
Confidence 8888888776543
No 370
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.41 E-value=3.8e-10 Score=105.80 Aligned_cols=300 Identities=13% Similarity=0.075 Sum_probs=160.4
Q ss_pred cChHHHHHHHHHHHhhcCCC--cEEEecccHHHHH-HHH-Hh----h-------cCC-CCEEEEeCcccHHHHHHHHhcC
Q psy15447 122 GTNVVHLDLENDIASFMGLE--ETALYSFGFSTSA-SAI-AA----Y-------VKR-NDAVFVDENINFAIQTGLIASR 185 (457)
Q Consensus 122 g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~-~ai-~a----~-------~~~-gd~v~~~~~~h~~~~~~~~~~g 185 (457)
|..+-..++++.+|+++|.+ ++++..+.+-.++ -++ .+ . ++. .-..+.+.+.|-..+.-....|
T Consensus 66 G~l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~G 145 (425)
T PF12897_consen 66 GGLDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFG 145 (425)
T ss_dssp S-SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT
T ss_pred CccCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhC
Confidence 55566788888999999865 4555554443222 122 11 1 111 1245667777777777777889
Q ss_pred CeEEEecC----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCC-CCCCCCCChHHHHHHH----HHcCcEEEEEcCc
Q psy15447 186 CKVQYFKH----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY-MNSADICPLKDILSLR----SKYQARIFVDESV 256 (457)
Q Consensus 186 ~~~~~~~~----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~-~~~G~i~~l~~i~~l~----~~~g~~li~DEa~ 256 (457)
.+.+.+|. +|++.+|+++++. +.++-+++-|.+ ||+|.+..-+.+++++ ...++.++-|.+|
T Consensus 146 iemi~VpM~~dGPDmD~Ve~LV~~D---------~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY 216 (425)
T PF12897_consen 146 IEMIPVPMTEDGPDMDMVEELVAED---------PSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAY 216 (425)
T ss_dssp -EEEEEEEETTEE-HHHHHHHTHTS---------TTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TT
T ss_pred cEEEecCCCCCCCCHHHHHHHHhcC---------CccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCc
Confidence 88887764 4899999998752 567888888877 5699999877666666 3679999999998
Q ss_pred ccccc-cCCCCc-------cccccCCCCCCccEEEecCcccc--cCcccEEEecHHHHHHHHhhCCcceecCC-CcHHHH
Q psy15447 257 SFGTL-GSTGHG-------VTEYFGVSTEEVDMIIGSLEHAL--GSVGGFCVGSSYIIEHHRLSGSGYCFSAS-LPPFLA 325 (457)
Q Consensus 257 ~~g~~-g~~g~~-------~~~~~~~~~~~~Di~~~s~sK~l--g~~gG~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 325 (457)
.+-.+ +....- .++..|- |+.+ ++..|.||.- |++-+|+++++..++.++......+.+.. .|.+--
T Consensus 217 ~vHhL~~~~~~~~~~nil~~~~~AGn-pdrv-~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRH 294 (425)
T PF12897_consen 217 AVHHLYDEEPRDALLNILDACAKAGN-PDRV-YVFASTSKITFPGAGVAFFAASEANLAWIKKHLSVQTIGPDKVNQLRH 294 (425)
T ss_dssp TT-BSSSSSS------HHHHHHHTT--TTSE-EEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHH-S---HHHHHHH
T ss_pred eEeeccccccchhhhHHHHHHHHcCC-CCeE-EEEecccccccCCcceeeeecCHHHHHHHHHHhcCceeCccHHHHHHH
Confidence 86555 321111 1122332 4555 8889999965 33337899998888877643321111110 122221
Q ss_pred HHHHHHHHHHhhCc-HHHHHHHHH-----------HHHHHHHhh-cccccCCeEEeccCCCCeEEEEecCCcchHHHHHH
Q psy15447 326 VAANKALHLLKANP-SLLTKLREK-----------CNTMHSLLS-QHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKL 392 (457)
Q Consensus 326 aaa~a~l~~~~~~~-~~~~~l~~~-----------~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 392 (457)
+ ++++..+ .+.+++++- .+.|.+.|. . ....+...+.++.++++...+. .
T Consensus 295 v------rff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~---~~ia~Wt~P~GGYFIsld~~~G--------~ 357 (425)
T PF12897_consen 295 V------RFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDG---LGIASWTKPKGGYFISLDVLDG--------T 357 (425)
T ss_dssp H------HHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTG---GTSEEE---SBSS-EEEEESTT---------
T ss_pred H------HHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCC---CCeeEecCCCCceEEEEecCCC--------h
Confidence 2 2222211 223333322 233344444 2 1123455566788888887765 6
Q ss_pred HHHHHHHHHHcCeeEecccc--CccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 393 LQTICDMCIQAGFAITCPSH--LDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 393 ~~~~~~~l~~~Gi~v~~~~~--~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+.++++.+.+.||.+++.+. |.. ..+.+..|||+|+. -+.+|++.+++.+..+.+.+
T Consensus 358 AkrvV~lakeAGV~LT~AGAtfPyg-~DP~D~nIRiAPS~-P~leel~~Am~~~~~cv~la 416 (425)
T PF12897_consen 358 AKRVVELAKEAGVALTPAGATFPYG-KDPRDSNIRIAPSY-PSLEELETAMDVFATCVKLA 416 (425)
T ss_dssp HHHHHHHHHHTTEE---TTTTSGGG---TTS-EEEE--SS-S-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCceeCCCCCCCCCC-CCCCCCcEEecCCC-CCHHHHHHHHHHHHHHHHHH
Confidence 78899999999999988553 322 12235689999977 58999999999988777654
No 371
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.41 E-value=1.4e-10 Score=109.66 Aligned_cols=324 Identities=11% Similarity=0.149 Sum_probs=201.3
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCC----CCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGV----GSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFST 152 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~----~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a 152 (457)
++.+..|.+.+|.+.-- |.++. +..+.+.++ .+.-+-..+|..+..-++...+++++|.+ .+=++-.++.+
T Consensus 73 N~~~~sfiG~GyY~~~~-P~vI~--rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAa 149 (450)
T COG0403 73 NKVFTSFIGAGYYDTYT-PPVIL--RNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAA 149 (450)
T ss_pred CchhhhhccCcccCCcC-cHHHH--HHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHH
Confidence 45556677777666643 44443 123344332 22223334566777788889999999977 44566677766
Q ss_pred HHHHHHhhc---CCCCEEEEeCcccHHHHHHHH----hcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEec
Q psy15447 153 SASAIAAYV---KRNDAVFVDENINFAIQTGLI----ASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEG 225 (457)
Q Consensus 153 ~~~ai~a~~---~~gd~v~~~~~~h~~~~~~~~----~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~ 225 (457)
-++++.+.. ++.+.+++++.+|+.+...++ -.|.++...+.+|.++|+.. .. ..+..++++.
T Consensus 150 AEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l~~~-~~----------~~~~gv~vQy 218 (450)
T COG0403 150 AEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDDLESA-DD----------GDVFGVLVQY 218 (450)
T ss_pred HHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhhhhhc-cc----------cCeEEEEEec
Confidence 665555442 345789999999999887654 33577888888888888877 33 3567888887
Q ss_pred CCCCCC-CCCChHHHHHHHHHcCcEEEEEc-CcccccccCCCCccccccCCCCCCccEEEecCcc-----cccCc-ccEE
Q psy15447 226 VYMNSA-DICPLKDILSLRSKYQARIFVDE-SVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEH-----ALGSV-GGFC 297 (457)
Q Consensus 226 v~~~~G-~i~~l~~i~~l~~~~g~~li~DE-a~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK-----~lg~~-gG~v 297 (457)
+. ..| ...++.+|.+.+|++|+++++=- --+.+.+-+.| .+ +.||++|+..- +||++ .||+
T Consensus 219 P~-~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPG-----e~-----GADIvvG~~QrfGvPmgfGGPhag~f 287 (450)
T COG0403 219 PN-TFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPPG-----EF-----GADIVVGSAQRFGVPMGFGGPHAGYF 287 (450)
T ss_pred CC-CCCccchhHHHHHHHHhhcCCEEEEEechhHhhccCCcc-----cc-----CCceEEecCcccCCCcCCCCcceeee
Confidence 77 456 66669999999999998877653 44555554433 23 34898887533 22222 2788
Q ss_pred EecHHHHHHHHh----------hCCccee--------------cCC-C-cHHHHHHHHHHHHH--Hh--hCcHHHHHHHH
Q psy15447 298 VGSSYIIEHHRL----------SGSGYCF--------------SAS-L-PPFLAVAANKALHL--LK--ANPSLLTKLRE 347 (457)
Q Consensus 298 ~~~~~~~~~~~~----------~~~~~~~--------------~~~-~-~~~~~aaa~a~l~~--~~--~~~~~~~~l~~ 347 (457)
+.++++...+.- ....|.. +++ . +...+| ..+++-. +. ...++.++..+
T Consensus 288 A~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA-~~As~y~~~hGp~GLk~iA~r~~~ 366 (450)
T COG0403 288 AVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLA-LAASMYAVYHGPQGLKEIAERIHR 366 (450)
T ss_pred eEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHH-HHHHHHHHHhChHHHHHHHHHHHH
Confidence 888877655410 0000100 111 1 111111 1122211 11 11346677888
Q ss_pred HHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEE
Q psy15447 348 KCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRIT 427 (457)
Q Consensus 348 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~ 427 (457)
+..++.++|++.. .|+++....-...+.+.++. . ....+.++....|+-++... ...+-++
T Consensus 367 ~a~~la~~L~~~~--~g~~~~~~~fFdt~~v~~~~-~-------~~~~l~~~~~~~G~~L~~~~---------~~~~~ia 427 (450)
T COG0403 367 LAAYLAAGLKEIG--AGVELVFDHFFDTFTVRVPE-E-------VAEALLAAAIAGGINLRRVD---------ADTVLIA 427 (450)
T ss_pred HHHHHHHHHhhcC--CceEeccccceeeEEEecch-h-------HHHHHHHHHHhcCCceeeec---------CCceEEE
Confidence 8999999999621 45776533222233444432 2 45667777778898887654 3578899
Q ss_pred ecCCCCHHHHHHHHHHHHHH
Q psy15447 428 CNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 428 ~~~~~t~edi~~~~~~l~~~ 447 (457)
+.-.+|+++|+.+++++...
T Consensus 428 ~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 428 LTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred eecccCHHHHHHHHHHHhhh
Confidence 99999999999999998764
No 372
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.40 E-value=4.5e-11 Score=116.25 Aligned_cols=281 Identities=14% Similarity=0.219 Sum_probs=153.9
Q ss_pred CCCcccChHHHHHHHHHHHhhcCCCcE--EEecccHH---HHHHHHHhhcCCCCEEEEeCcccHHHHHHHH----hcCCe
Q psy15447 117 PRGFYGTNVVHLDLENDIASFMGLEET--ALYSFGFS---TSASAIAAYVKRNDAVFVDENINFAIQTGLI----ASRCK 187 (457)
Q Consensus 117 ~~~~~g~~~~~~~l~~~la~~~g~~~~--i~~~sG~~---a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~----~~g~~ 187 (457)
+-..+|+....-+++..+++++|.+.+ =++..++. |...+++...++++.|+++...|+.+...++ ..|.+
T Consensus 102 pEisQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~ 181 (429)
T PF02347_consen 102 PEISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIE 181 (429)
T ss_dssp GGGBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEE
T ss_pred cHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeE
Confidence 334578888899999999999999854 34445553 4444444444445689999999998877544 34677
Q ss_pred EEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCc--ccccccCCC
Q psy15447 188 VQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESV--SFGTLGSTG 265 (457)
Q Consensus 188 ~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~--~~g~~g~~g 265 (457)
++.++..+-.... . +.+++|+++.++ ..|.+.++++|.+++|++|.++++ .+- +.+.+-+.
T Consensus 182 iv~~~~~~~~~~d------~--------~~~a~v~vq~Pn-~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l~~P- 244 (429)
T PF02347_consen 182 IVEVPLDEDGTTD------D--------DDTAAVMVQNPN-TFGVFEDIKEIADIAHAAGALVIV-GADPNALGGLKSP- 244 (429)
T ss_dssp EEEE-BBTTCSB-------S--------TTEEEEEEESS--TTSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC--G-
T ss_pred EEEecccccCCcc------c--------cCeEEEEeecCC-CCceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCcCCh-
Confidence 7777643211111 1 567888888777 569999999999999999999988 543 33322221
Q ss_pred CccccccCCCCCCccEEEecCcccccCc----c---cEEEecHHHHHHHHh----------hCCccee------------
Q psy15447 266 HGVTEYFGVSTEEVDMIIGSLEHALGSV----G---GFCVGSSYIIEHHRL----------SGSGYCF------------ 316 (457)
Q Consensus 266 ~~~~~~~~~~~~~~Di~~~s~sK~lg~~----g---G~v~~~~~~~~~~~~----------~~~~~~~------------ 316 (457)
..+| +||+++. +|.||.+ | |+++.+++++.++.- ...+|..
T Consensus 245 ----ge~G-----ADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrRe 314 (429)
T PF02347_consen 245 ----GEYG-----ADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRRE 314 (429)
T ss_dssp ----GGGT------SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGC
T ss_pred ----hhcC-----ccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeecccccccccccc
Confidence 1233 4898775 9999631 2 788888887766520 1111111
Q ss_pred --cCC--CcHHHHHHHHHH-HHHHh--hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHH
Q psy15447 317 --SAS--LPPFLAVAANKA-LHLLK--ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVAS 389 (457)
Q Consensus 317 --~~~--~~~~~~aaa~a~-l~~~~--~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 389 (457)
+.+ .+...+|..... +.++. ...++.++...++.|+.+.|++ ..++.+....-.-.+....+. .
T Consensus 315 KAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~---~~~~~~~~~~f~e~v~~~~~~-~----- 385 (429)
T PF02347_consen 315 KATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKK---IYGLPFDNPFFFEFVVVFSKD-K----- 385 (429)
T ss_dssp CSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---TTBECSSSSSBSSEEEEESS--H-----
T ss_pred chhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH---hcCcccCCCCceeeeeecCCc-H-----
Confidence 001 123332222111 22222 1245677888899999999998 334433221112222222221 2
Q ss_pred HHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447 390 KKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL 444 (457)
Q Consensus 390 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l 444 (457)
...++.+++...|+.... ...+.+-+++.-.+|++|||+++++|
T Consensus 386 --~~~~l~~~~~~~gl~~~~---------~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 386 --EVEELLKRGIEGGLNLRY---------PDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp --HHHHHHHTT----EEEGG---------G-SSEEEEE--TT--HHHHHHHHH--
T ss_pred --HHHHHHHHHHhcCCCccc---------cCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 334466666666744422 12458999999999999999999875
No 373
>KOG2467|consensus
Probab=99.40 E-value=1.2e-10 Score=107.36 Aligned_cols=325 Identities=14% Similarity=0.140 Sum_probs=188.2
Q ss_pred ChhhHHHHHHHHH-hcCCCCCCCCCcccChHHHHHHH---H-HHHhhcCCCc---E--EEecccHHHHHHHHHhhcCCCC
Q psy15447 96 NPDIEKCAIDCID-KNGVGSCGPRGFYGTNVVHLDLE---N-DIASFMGLEE---T--ALYSFGFSTSASAIAAYVKRND 165 (457)
Q Consensus 96 ~p~i~~a~~~~l~-~~~~~~~~~~~~~g~~~~~~~l~---~-~la~~~g~~~---~--i~~~sG~~a~~~ai~a~~~~gd 165 (457)
+..+.+|+-..+. +|.-++.|.|.+.| ++...++| + +--+.++.+. . +-.-||+-||..+..++++|++
T Consensus 53 s~aVmeAlGS~ltNKYSEGyPG~RYYGG-ne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~ 131 (477)
T KOG2467|consen 53 SRAVMEALGSCLTNKYSEGYPGARYYGG-NEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHE 131 (477)
T ss_pred HHHHHHHHhHHhhcccccCCCcccccCc-chHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCC
Confidence 4667788777664 57777777776544 45555443 2 2223456542 2 3345999999999999999999
Q ss_pred EEEEeCcccHHH-HHHH-----HhcCCeEE------Eec----CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447 166 AVFVDENINFAI-QTGL-----IASRCKVQ------YFK----HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN 229 (457)
Q Consensus 166 ~v~~~~~~h~~~-~~~~-----~~~g~~~~------~~~----~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~ 229 (457)
.|+--+.-|+.. -.|. +++...++ .++ ..|.+.||+..... +.+++|.-.. .
T Consensus 132 RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~f----------rPk~iiaG~S--a 199 (477)
T KOG2467|consen 132 RIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLF----------RPKLIIAGTS--A 199 (477)
T ss_pred eeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhc----------CCcEEEeccc--c
Confidence 987643332221 1222 22222221 111 12788888776653 3356655221 1
Q ss_pred CCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEecHH------
Q psy15447 230 SADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGSSY------ 302 (457)
Q Consensus 230 ~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~~~------ 302 (457)
-....+..++++||++.|++|++|-+|--|..-. |- ...-| +-.||++.|.+|++ |++||.+.-++-
T Consensus 200 Y~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA-~v-ipsPF----ey~DiVTTTTHKsLRGPRg~mIFyRkGvk~~~~ 273 (477)
T KOG2467|consen 200 YSRLIDYARFRKIADKVGAYLMADMAHISGLVAA-GV-IPSPF----EYCDIVTTTTHKSLRGPRGAMIFYRKGVKSIKP 273 (477)
T ss_pred chhhccHHHHHHHHHhcCceeehhhhhHHHHHhc-cc-CCCcc----cccceeeccccccccCCcceeEEEeccCCcCCC
Confidence 1234568999999999999999999986554321 11 11112 34589999999999 888888765431
Q ss_pred ---------HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-
Q psy15447 303 ---------IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH- 370 (457)
Q Consensus 303 ---------~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~- 370 (457)
+-+.+...-.+. ..++++....++...+|+.... -.+..+++.+|++.|.+.|.+ .|+.++..
T Consensus 274 k~g~~i~ydlE~kINfaVFP~-lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~----~Gy~lvtgG 348 (477)
T KOG2467|consen 274 KQGKEILYDLEDKINFAVFPG-LQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALIS----RGYKLVTGG 348 (477)
T ss_pred CCCCcceechhhhhhhhcccc-ccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH----cCceEecCC
Confidence 222222111121 2223333333443344543322 135677888999999999988 88888643
Q ss_pred CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCC----CHHHHHHHHHHHHH
Q psy15447 371 RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISH----TEQDMNSLIETLCK 446 (457)
Q Consensus 371 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~----t~edi~~~~~~l~~ 446 (457)
.+.+++.+.+....-. ......+++. -+|.+....-|.......++.+|+..+.-+ .++|++++.+-|.+
T Consensus 349 TDnHlvLvDLr~~G~d---GarvE~vle~---~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~ 422 (477)
T KOG2467|consen 349 TDNHLVLVDLRPKGVD---GARVEKVLEL---CHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDR 422 (477)
T ss_pred ccceEEEEeccccCCc---hHHHHHHHHH---hhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHH
Confidence 3467777766543200 1122233322 244443333222222234678999876654 46899999998887
Q ss_pred HHHH
Q psy15447 447 SHDI 450 (457)
Q Consensus 447 ~~~~ 450 (457)
+.+.
T Consensus 423 av~i 426 (477)
T KOG2467|consen 423 AVKI 426 (477)
T ss_pred HHHH
Confidence 7654
No 374
>KOG0258|consensus
Probab=99.33 E-value=1.5e-09 Score=101.03 Aligned_cols=336 Identities=13% Similarity=0.130 Sum_probs=187.6
Q ss_pred hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccHHHHHHHHHhhc-CCCCEEEEeC
Q psy15447 97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGFSTSASAIAAYV-KRNDAVFVDE 171 (457)
Q Consensus 97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~~~ai~a~~-~~gd~v~~~~ 171 (457)
.++++.+...|...|-+.+.+....|..-.+..+++.+.+.-|. +.++++++.+.|+...++.++ ++++-|+++-
T Consensus 89 ~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPi 168 (475)
T KOG0258|consen 89 TDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPI 168 (475)
T ss_pred HHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeec
Confidence 34566666666654433333334445555555555555555552 234444555678888887765 5667889988
Q ss_pred cccHHHHHHHHhcCCeEEEec-------CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHH
Q psy15447 172 NINFAIQTGLIASRCKVQYFK-------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILS 241 (457)
Q Consensus 172 ~~h~~~~~~~~~~g~~~~~~~-------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~ 241 (457)
+-|+-+-..+.+.|...+.+- ..|.++|++.+++...+ -..++++|++ +-||||.+.. +++|..
T Consensus 169 PQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~-----i~~r~lvvIN-PGNPTGqvls~e~ie~i~~ 242 (475)
T KOG0258|consen 169 PQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKG-----INPRALVVIN-PGNPTGQVLSEENIEGIIC 242 (475)
T ss_pred CCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhcc-----CCceEEEEEC-CCCccchhhcHHHHHHHHH
Confidence 888777777777776554332 12789999999876532 1234455555 5569998865 889999
Q ss_pred HHHHcCcEEEEEcCcccccccCCCC--cc---ccccC-CCCCCcc-EEEecCcccc----cCcccEE--Ee-cHHHHHHH
Q psy15447 242 LRSKYQARIFVDESVSFGTLGSTGH--GV---TEYFG-VSTEEVD-MIIGSLEHAL----GSVGGFC--VG-SSYIIEHH 307 (457)
Q Consensus 242 l~~~~g~~li~DEa~~~g~~g~~g~--~~---~~~~~-~~~~~~D-i~~~s~sK~l----g~~gG~v--~~-~~~~~~~~ 307 (457)
.|.++|++|+.||+|---++....+ .+ .-+.| .-++++- +-.+|.||++ |..|||+ +. .+++.+.+
T Consensus 243 fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi 322 (475)
T KOG0258|consen 243 FAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQI 322 (475)
T ss_pred HHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHH
Confidence 9999999999999976554432111 11 01111 1122222 3356778988 3568885 22 23333333
Q ss_pred HhhCCcceecC---------CCcHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEE
Q psy15447 308 RLSGSGYCFSA---------SLPPFLAVAANKALHLL-KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKY 377 (457)
Q Consensus 308 ~~~~~~~~~~~---------~~~~~~~aaa~a~l~~~-~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 377 (457)
........+.. -.+|.. -+-.+.+.. .+.+...+.++++++.+.+.++. +.|+.+. +.++.|..
T Consensus 323 ~Kl~si~lc~~V~GQ~~vdl~VnPP~--Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns---~~gi~cn-~~qGAMY~ 396 (475)
T KOG0258|consen 323 KKLASIKLCPQVSGQKLVDLVVNPPK--PGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNS---LEGISCN-PVQGAMYL 396 (475)
T ss_pred HHHHhhhhcCCccchhhhceecCCCC--CCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhh---cCceeec-cCccceee
Confidence 22111100000 000000 011112111 12345778888999999999988 7899987 55666554
Q ss_pred EE-ecCCcch-HHHH---HHH-HHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 378 LY-LQKSDDE-VASK---KLL-QTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 378 i~-~~~~~~~-~~~~---~~~-~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
+. +.-+... +.+. ... .-.|.+|++. ||.+.|+..+.. .++.-++|.++-... + ..++.++++.++
T Consensus 397 fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ--~~GtyH~R~TiLp~~----~-~~i~~~~~fH~~ 469 (475)
T KOG0258|consen 397 FPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQ--KEGTYHFRTTILPPG----L-EIIEKFKKFHAE 469 (475)
T ss_pred cccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCC--CCceeEEEEeecCch----h-HHHHHHHHHHHH
Confidence 42 2222111 1110 011 1256777776 999999876533 333447888763222 3 555555555444
Q ss_pred h
Q psy15447 451 A 451 (457)
Q Consensus 451 ~ 451 (457)
+
T Consensus 470 f 470 (475)
T KOG0258|consen 470 F 470 (475)
T ss_pred H
Confidence 3
No 375
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.33 E-value=5.6e-10 Score=104.45 Aligned_cols=326 Identities=10% Similarity=0.019 Sum_probs=184.6
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhcCC--CCCCCCCcccChHHHHHHHHHHHh-hcCCC-------c--EEEecc
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGV--GSCGPRGFYGTNVVHLDLENDIAS-FMGLE-------E--TALYSF 148 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~--~~~~~~~~~g~~~~~~~l~~~la~-~~g~~-------~--~i~~~s 148 (457)
.-+|+.-+.|.+-.+.+.+..+++++-++.-. .+..+-...|. ..+.+.+++ ++|.+ + .+-+.+
T Consensus 27 ~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~----~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~G 102 (396)
T COG1448 27 NKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGL----PEFLEAVQKLLFGADSPALAEDRVATVQTLG 102 (396)
T ss_pred CeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCc----HHHHHHHHHHhcCCCcHHHHhhhHhheecCC
Confidence 45677666665555444444444443333211 11122223343 344444444 35533 1 355678
Q ss_pred cHHHHHHHHHhh--cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccE
Q psy15447 149 GFSTSASAIAAY--VKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKK 219 (457)
Q Consensus 149 G~~a~~~ai~a~--~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~ 219 (457)
|+.|+..+-.-+ ..+...|.++++.++....-+...|.++..|++- |.+.+-..|++.. .+..
T Consensus 103 GTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~--------~~~v 174 (396)
T COG1448 103 GTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAP--------EGSV 174 (396)
T ss_pred cchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhCC--------CCCE
Confidence 998877765443 3456679999999888888888889999888754 3445544554432 3334
Q ss_pred EEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCc-ccccccCCCCccccc-cCCCCCCccEEEecCcccccCc-
Q psy15447 220 FIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESV-SFGTLGSTGHGVTEY-FGVSTEEVDMIIGSLEHALGSV- 293 (457)
Q Consensus 220 ~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~-~~g~~g~~g~~~~~~-~~~~~~~~Di~~~s~sK~lg~~- 293 (457)
++.=...+||||.-+. +++|.++.++.|.+-++|=|| +|+.-...-...... ....+. -++..|+||.||.-
T Consensus 175 vLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~--~lva~S~SKnfgLYg 252 (396)
T COG1448 175 VLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPE--LLVASSFSKNFGLYG 252 (396)
T ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCc--EEEEehhhhhhhhhh
Confidence 4555567789998776 679999999999999999986 443210000000000 011111 47889999999853
Q ss_pred ---ccE--EEecHHHHHHHHhhC---CcceecCCCcHHHHHHHHHHH-----HHH--hhCcHHHHHHHHHHHHHHHHhhc
Q psy15447 294 ---GGF--CVGSSYIIEHHRLSG---SGYCFSASLPPFLAVAANKAL-----HLL--KANPSLLTKLREKCNTMHSLLSQ 358 (457)
Q Consensus 294 ---gG~--v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~aaa~a~l-----~~~--~~~~~~~~~l~~~~~~l~~~L~~ 358 (457)
|++ ++.+++..+.+...- -+..||. +|...++.....| +.. .+..++++++.+++..|.+.|++
T Consensus 253 ERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySn-PP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~ 331 (396)
T COG1448 253 ERVGALSVVAEDAEEADRVLSQLKAIIRTNYSN-PPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKA 331 (396)
T ss_pred hccceeEEEeCCHHHHHHHHHHHHHHHHhccCC-CchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 343 344444444432211 1123443 3333333332222 111 12246788999999999999987
Q ss_pred ccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHH
Q psy15447 359 HKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDM 437 (457)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi 437 (457)
...-..+.+.....+ |+... +- .. +=+++|++ .|||+...+ ||++.. +++..|
T Consensus 332 ~~~~~~f~~i~~Q~G-MFsy~-Gl---------s~-~QV~rLree~~IY~v~sG-------------Ri~vaG-l~~~ni 385 (396)
T COG1448 332 LGAPRNFDFIISQRG-MFSYT-GL---------SP-EQVDRLREEFGIYLVASG-------------RINVAG-LNTSNI 385 (396)
T ss_pred hCCCcccchHhhcCc-eeecC-CC---------CH-HHHHHHHHhccEEEecCC-------------eeeecc-CChhhH
Confidence 332233555433333 33322 11 11 23345554 599987532 788754 799999
Q ss_pred HHHHHHHHHH
Q psy15447 438 NSLIETLCKS 447 (457)
Q Consensus 438 ~~~~~~l~~~ 447 (457)
+.+.++|.++
T Consensus 386 ~~va~ai~~v 395 (396)
T COG1448 386 DYVAKAIAAV 395 (396)
T ss_pred HHHHHHHHhh
Confidence 9999998765
No 376
>KOG1383|consensus
Probab=99.31 E-value=6.5e-10 Score=106.06 Aligned_cols=343 Identities=14% Similarity=0.179 Sum_probs=216.0
Q ss_pred EECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcE---EEecccHHH
Q psy15447 76 NINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEET---ALYSFGFST 152 (457)
Q Consensus 76 ~~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~---i~~~sG~~a 152 (457)
..||+.-++.+|+. .+..+++..+-+.+.+.++ .++.+..+.+......+.-..++.+++.+.. ..+++|+++
T Consensus 75 ~ld~~~~~~~vS~~--v~~~~~~~~~l~~~~~~k~--N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses 150 (491)
T KOG1383|consen 75 MLDGNPRLGLASGV--VYWGEPELDKLIMEAYNKF--NPLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSES 150 (491)
T ss_pred ccCCCcccCeeeEE--EecCCcchhhHHHHHHhhc--CccCccccchhHHHHHHHHHHHHHHhcCCccccCccccccchH
Confidence 34677556666542 2223677777777777775 5555666667777777777788888875432 456778888
Q ss_pred HHHHHHhhcC-----CC---CEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCcc
Q psy15447 153 SASAIAAYVK-----RN---DAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTK 218 (457)
Q Consensus 153 ~~~ai~a~~~-----~g---d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~ 218 (457)
+..+.+.+.. ++ ..++.....|.+..+..+..+.++..++.. |+..+.+.+. +++
T Consensus 151 ~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~-----------eNt 219 (491)
T KOG1383|consen 151 GLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLDEGDYRVDPGKVVRMID-----------ENT 219 (491)
T ss_pred HHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeeccccceEecHHHHHHHhc-----------cce
Confidence 7766655421 11 356777888999999988888777776654 6677777665 467
Q ss_pred EEEEEecCCCCCCCCCChHHHHHHHHH-cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccc-ccCcc-c
Q psy15447 219 KFIIVEGVYMNSADICPLKDILSLRSK-YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHA-LGSVG-G 295 (457)
Q Consensus 219 ~~vi~e~v~~~~G~i~~l~~i~~l~~~-~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~-lg~~g-G 295 (457)
++++.+-++-|.|.+.++++|.++.-+ +++.+++|.+-|..+.. .+-.....||..-..+.-+..+-||. |.+.| +
T Consensus 220 i~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p-~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~ 298 (491)
T KOG1383|consen 220 IMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINP-AGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSS 298 (491)
T ss_pred EEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCcccccc-ccccCccccccCCCCceeEeeccceeeeeecCcE
Confidence 889999888899999999999999988 99999999987654441 11111123443322333445566673 22333 4
Q ss_pred E-EEecHHHHHHHHhhC--------CcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCC
Q psy15447 296 F-CVGSSYIIEHHRLSG--------SGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQR 364 (457)
Q Consensus 296 ~-v~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~ 364 (457)
+ +..++++..+.-... ..++..++-+....++.-+++-.+.++ .+..+++.++...+++.+++ +.+
T Consensus 299 ~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~---i~~ 375 (491)
T KOG1383|consen 299 WVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIEN---IKG 375 (491)
T ss_pred EEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhc---ccc
Confidence 4 444444433321100 011111221222223333343333222 35667888999999999999 788
Q ss_pred eEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHH-HHHHHH
Q psy15447 365 FLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDM-NSLIET 443 (457)
Q Consensus 365 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi-~~~~~~ 443 (457)
+.+.+. |.+.+.+.+.... .-.++.+.|.++|-.+.....| ..+-+++...+.++++ |+++.-
T Consensus 376 i~i~gk---p~vs~~~~~s~~~-----~i~elsd~l~~~GW~lnalq~P--------~a~Hi~vt~~~~~~~~A~~~v~D 439 (491)
T KOG1383|consen 376 IKIVGK---PLVSFILFGSNDV-----NIFELSDLLRKKGWILNALQFP--------AAIHICVTRVHAREDVADRFVAD 439 (491)
T ss_pred ceecCC---CcEEEEEccCCcc-----chhhhhHHHHhcCcCccccCCC--------CceEEEEEeeeccHHHHHHHHHH
Confidence 888754 4454444333211 4457889999999766554432 4677888777777774 678888
Q ss_pred HHHHHHHhcC
Q psy15447 444 LCKSHDIAVQ 453 (457)
Q Consensus 444 l~~~~~~~~~ 453 (457)
|++++.++..
T Consensus 440 i~~~~~el~~ 449 (491)
T KOG1383|consen 440 IRKVVEELKS 449 (491)
T ss_pred HHHHHHHHHh
Confidence 8888877753
No 377
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.27 E-value=3.2e-09 Score=100.97 Aligned_cols=301 Identities=12% Similarity=0.092 Sum_probs=157.6
Q ss_pred HHHHHhhcCCC---cEEEecccH-HHHHHHHHhh--cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--------CCH
Q psy15447 131 ENDIASFMGLE---ETALYSFGF-STSASAIAAY--VKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--------NNM 196 (457)
Q Consensus 131 ~~~la~~~g~~---~~i~~~sG~-~a~~~ai~a~--~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~ 196 (457)
...+-+..|.. .++++.-.+ .++...+.++ ...++.|+.+...|.+-+.++...|.+++.++. .|.
T Consensus 62 ~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~ 141 (389)
T PF05889_consen 62 VLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDL 141 (389)
T ss_dssp HHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHH
T ss_pred HHHHHHHcCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccH
Confidence 33444455643 466665433 2333334343 356789999999999999999999988776653 257
Q ss_pred HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC-hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCC
Q psy15447 197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP-LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVS 275 (457)
Q Consensus 197 ~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~-l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~ 275 (457)
+.+|+.+++.. ....+.++.+.....|..++ +.+|.++|++||+..++-.||+.-.- ..-+-+...+.
T Consensus 142 ~~ie~~i~~~G--------~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~-~~~~~i~~a~~-- 210 (389)
T PF05889_consen 142 EAIEAKIEELG--------ADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSS-KCMHLIQQAWR-- 210 (389)
T ss_dssp HHHHHHHHHHC--------GGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-H-HHHHHHHHHHH--
T ss_pred HHHHHHHHHhC--------CCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHH-HHHHHHHHHHh--
Confidence 88999997765 23455556666666788887 99999999999999999999876100 00000000000
Q ss_pred CCCccEEEecCccccc-Cccc-EEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHH
Q psy15447 276 TEEVDMIIGSLEHALG-SVGG-FCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCN 350 (457)
Q Consensus 276 ~~~~Di~~~s~sK~lg-~~gG-~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~ 350 (457)
--++|..+.|..|-|= +.|| .+++. +..+..+...-.+- .+..|..- ...+|..+... ..++....+.-.
T Consensus 211 ~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~vs~~YpGR---as~sp~ld--~~itLl~LG~~g~~~ll~~r~~~f~ 285 (389)
T PF05889_consen 211 VGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAVSKEYPGR---ASASPSLD--LFITLLSLGCTGYGALLKERKASFP 285 (389)
T ss_dssp HSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHHHHHTSHSH---BTSHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcceeeeecCCCEEecCCCcEEEecCHHHHHHHHHHhhhh---hhcccchH--HHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 0133677889999882 3344 44444 45666554322111 12222211 12222222111 123344444555
Q ss_pred HHHHHhhcccccCCeEEeccCCCCe-EEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCc---c---ccCCCCCe
Q psy15447 351 TMHSLLSQHKVTQRFLVQGHRDTPL-KYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLD---Q---EAKKQKPS 423 (457)
Q Consensus 351 ~l~~~L~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~---~---~~~~~~~~ 423 (457)
++.+.|++.....+-.+...+..++ +.+.+..-.... ......+...|..+||--..+.-+. . ....+.++
T Consensus 286 ~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~--~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Y 363 (389)
T PF05889_consen 286 YLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEIS--QKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPY 363 (389)
T ss_dssp HHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCC--SSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSE
T ss_pred HHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhhc--cchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHH
Confidence 5555554432223433322233333 333333211000 0145678899999976432211110 0 00112478
Q ss_pred EEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 424 IRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 424 lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
+-++....+++||+|.+++.|+++++
T Consensus 364 lt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 364 LTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp EEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 99988899999999999999999874
No 378
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.27 E-value=7.1e-10 Score=105.42 Aligned_cols=223 Identities=12% Similarity=0.091 Sum_probs=151.4
Q ss_pred ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEE-----e
Q psy15447 96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFV-----D 170 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~-----~ 170 (457)
+|+..+++.+.+..+-.-- .........+-...+.+.++..+|.+.+.++++.+.|+..++.++..++..|+- +
T Consensus 40 ~~e~iea~~~~~~~~v~Le-~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~lV~ 118 (395)
T COG1921 40 SPEAIEAMKEAMRAPVELE-TDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGELVE 118 (395)
T ss_pred CHHHHHHHHHHhcccceee-eecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhccCCeEEEEcccccc
Confidence 6889999888887643211 111111122333467777777888899999999999999888888875555542 3
Q ss_pred CcccHHHHHHHHhcCCeEEEecCC---CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcC
Q psy15447 171 ENINFAIQTGLIASRCKVQYFKHN---NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQ 247 (457)
Q Consensus 171 ~~~h~~~~~~~~~~g~~~~~~~~~---d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g 247 (457)
+.|+.+...+++.|++++.+... ...+.+.+|.+.. ...+-+..+-+..+ ...+++++.++|++||
T Consensus 119 -gg~~~v~d~~~~aG~~l~EvG~tn~t~~~d~~~AIne~t---------a~llkV~s~~~~f~-~~l~~~~l~~ia~~~~ 187 (395)
T COG1921 119 -GGAFRVPDIIRLAGAKLVEVGTTNRTHLKDYELAINENT---------ALLLKVHSSNYGFT-GMLSEEELVEIAHEKG 187 (395)
T ss_pred -CCCCChhHHHHHcCCEEEEecccCcCCHHHHHHHhccCC---------eeEEEEeecccccc-ccccHHHHHHHHHHcC
Confidence 57888999999999999887643 5778888886532 11233333322112 2346889999999999
Q ss_pred cEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-CcccEEEecHHHHHHHHhhCCcceecCCCcHHHHH
Q psy15447 248 ARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAV 326 (457)
Q Consensus 248 ~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 326 (457)
+.+|+|.+-+.-+-- -....+.. ..++|+++.|-.|.|| +.+|.++|++++++.+++.... +..-......+
T Consensus 188 lpvivD~aSg~~v~~--e~~l~~~l---a~GaDLV~~SgdKllgGPqaGii~GkKelI~~lq~~~l~--Ralrv~K~tla 260 (395)
T COG1921 188 LPVIVDLASGALVDK--EPDLREAL---ALGADLVSFSGDKLLGGPQAGIIVGKKELIEKLQSHPLK--RALRVDKETLA 260 (395)
T ss_pred CCEEEecCCcccccc--ccchhHHH---hcCCCEEEEecchhcCCCccceEechHHHHHHHHhhhhh--hhhhcCcHhHH
Confidence 999999985432110 01111111 2456999999999996 5689999999999998765533 33334667778
Q ss_pred HHHHHHHHHhh
Q psy15447 327 AANKALHLLKA 337 (457)
Q Consensus 327 aa~a~l~~~~~ 337 (457)
+..++|+....
T Consensus 261 ~l~~aLe~y~~ 271 (395)
T COG1921 261 ALEAALELYLQ 271 (395)
T ss_pred HHHHHHHHHcC
Confidence 88888887654
No 379
>KOG0629|consensus
Probab=99.22 E-value=2.5e-09 Score=100.75 Aligned_cols=305 Identities=12% Similarity=0.090 Sum_probs=175.2
Q ss_pred HHHHHHHhhcCCC---cEEEecccHHHHHHHHHhhcC--------------CCCEEEEeCcccHHHHHHHHhcC---CeE
Q psy15447 129 DLENDIASFMGLE---ETALYSFGFSTSASAIAAYVK--------------RNDAVFVDENINFAIQTGLIASR---CKV 188 (457)
Q Consensus 129 ~l~~~la~~~g~~---~~i~~~sG~~a~~~ai~a~~~--------------~gd~v~~~~~~h~~~~~~~~~~g---~~~ 188 (457)
++-.++-++.|.+ +.+|..+|+-+|..++.+..- |.-+++.++.+|.++.++....| -.+
T Consensus 145 ~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c 224 (510)
T KOG0629|consen 145 EVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHC 224 (510)
T ss_pred HHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCcee
Confidence 3334444445533 569999999988888754321 22356778889999999998887 344
Q ss_pred EEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccC
Q psy15447 189 QYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGS 263 (457)
Q Consensus 189 ~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~ 263 (457)
+.++.+ ++++||+.|.+..++ +..+.+|-.......-|...||..|+++|++|++|+++|.|++.|.+=.
T Consensus 225 ~~v~t~e~Gkm~~~dLe~kile~k~k-----g~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS 299 (510)
T KOG0629|consen 225 IKVKTDERGKMIPDDLEKKILEAKAK-----GGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMS 299 (510)
T ss_pred EEecccccCccchHHHHHHHHHHHhc-----CCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccC
Confidence 555433 799999998775531 1223344444444446889999999999999999999999998766422
Q ss_pred -CCCccccccCCCCCCccEEEecCcccccCc--ccEEEecHH-HHHHHHhhCCccee----------cCCCcHHHHHHHH
Q psy15447 264 -TGHGVTEYFGVSTEEVDMIIGSLEHALGSV--GGFCVGSSY-IIEHHRLSGSGYCF----------SASLPPFLAVAAN 329 (457)
Q Consensus 264 -~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~--gG~v~~~~~-~~~~~~~~~~~~~~----------~~~~~~~~~aaa~ 329 (457)
.-+. ..-|++ ++|.+..+.||.+|.+ .+++..+.+ +.+.-......|.| -++--.+.|..-.
T Consensus 300 ~k~R~--kl~Gie--ra~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~ 375 (510)
T KOG0629|consen 300 RKHRH--KLTGIE--RANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHV 375 (510)
T ss_pred hhhHh--hccCcc--ccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccc
Confidence 1121 334564 4578888999999853 244333332 11111111111111 1111222221110
Q ss_pred HH--HHHHh------hCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc--CCCCeEEEEecCC----cch-----HHHH
Q psy15447 330 KA--LHLLK------ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH--RDTPLKYLYLQKS----DDE-----VASK 390 (457)
Q Consensus 330 a~--l~~~~------~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~--~~~~~~~i~~~~~----~~~-----~~~~ 390 (457)
-. +-++. .-+..++++-++++||.+.|++ ..+....-. +....+.+....+ .+. ..-.
T Consensus 376 D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lre---r~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~ 452 (510)
T KOG0629|consen 376 DVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLRE---REGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDSRLV 452 (510)
T ss_pred cHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHh---cccceehhcCCCceEEEeeccCchHhccCcccchhhhHHH
Confidence 11 11111 1135678888999999999998 445443322 2222222221111 000 1111
Q ss_pred HHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe-cCCCCHHHHHHHHHHHHHHHH
Q psy15447 391 KLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC-NISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 391 ~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~~ 449 (457)
..+-.+...++++|-...... |. ..-++.+|..+ +...+.+|+|.+++.|..+.+
T Consensus 453 kVaPkIK~~Mm~~Gt~Mi~Yq-Pl---~~~~nffr~v~sn~a~~~ad~dflldEIerlgq 508 (510)
T KOG0629|consen 453 KVAPKIKERMMKKGTTMIGYQ-PL---GDKPNFFRMVISNPALTEADLDFLLDEIERLGQ 508 (510)
T ss_pred hhCcHHHHHHHhccceeeEec-cc---ccccchhheecccchhhhhhHHHHHHHHHHhcc
Confidence 233457778888987654322 11 11246777765 345799999999999987643
No 380
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.16 E-value=4.3e-08 Score=91.61 Aligned_cols=246 Identities=17% Similarity=0.190 Sum_probs=130.4
Q ss_pred ccChH-HHHHHHHHHHhhcCCCcEEE---ecccHHHHHHHHHhhcCCCCEEEEeCcc-cHHHHHHHHhc----------C
Q psy15447 121 YGTNV-VHLDLENDIASFMGLEETAL---YSFGFSTSASAIAAYVKRNDAVFVDENI-NFAIQTGLIAS----------R 185 (457)
Q Consensus 121 ~g~~~-~~~~l~~~la~~~g~~~~i~---~~sG~~a~~~ai~a~~~~gd~v~~~~~~-h~~~~~~~~~~----------g 185 (457)
||..+ -++.|++-.|+.+|.|.+++ +.||++|+..++.++.+|||.++.-.+. |-.....+-+. |
T Consensus 49 YGY~D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~G 128 (403)
T PF06838_consen 49 YGYDDIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFG 128 (403)
T ss_dssp T-TT-HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT
T ss_pred CCCCCccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhC
Confidence 44444 46679999999999999987 5799999999999999999998864433 33333333222 2
Q ss_pred CeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC--ChHHHHHHH---HH--cCcEEEEE
Q psy15447 186 CKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC--PLKDILSLR---SK--YQARIFVD 253 (457)
Q Consensus 186 ~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~--~l~~i~~l~---~~--~g~~li~D 253 (457)
.....++. .|.+.+++.++. ++++|.+.-..+-+ ... .+++|.++| |+ -++++++|
T Consensus 129 i~Y~~v~L~~dg~~D~~~i~~~~~~-----------~tk~v~IQRSrGYs-~R~sl~i~~I~~~i~~vk~~~p~~iifVD 196 (403)
T PF06838_consen 129 IKYREVPLTEDGTIDWEAIKKALKP-----------NTKMVLIQRSRGYS-WRPSLTIEEIKEIIKFVKEINPDVIIFVD 196 (403)
T ss_dssp -EEEE--B-TTSSB-HHHHHHHHHT-----------TEEEEEEE-S-TTS-SS----HHHHHHHHHHHHHH-TTSEEEEE
T ss_pred ceeEEEeecCCCCcCHHHHHHhhcc-----------CceEEEEecCCCCC-CCCCCCHHHHHHHHHHHHhhCCCeEEEEe
Confidence 33333332 278888888863 45777775322110 111 244555554 44 38999999
Q ss_pred cCcccccccCCCCccccccCCCCCCccEEEecCcccccC----cccEEEecHHHHHHHHhhC--Ccc--eecCCCcHHHH
Q psy15447 254 ESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSG--SGY--CFSASLPPFLA 325 (457)
Q Consensus 254 Ea~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~ 325 (457)
.+|+..+- ...-..-++|++.||+=|..|+ .|||++|++++++...... .+. ..+.++. ..
T Consensus 197 NCYGEFvE---------~~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e~G~t~~--~~ 265 (403)
T PF06838_consen 197 NCYGEFVE---------TQEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGKEVGATLG--TN 265 (403)
T ss_dssp -TTTTTTS---------SS-GGGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGGGSS--TT--TH
T ss_pred CCcceecc---------ccCccccchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCccccccccCcc--hH
Confidence 99875321 1111113559999999999963 5899999999999874332 111 1111110 00
Q ss_pred HHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC---C-CeEEEEecCCcchHHHHHHHHHHHHHHH
Q psy15447 326 VAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD---T-PLKYLYLQKSDDEVASKKLLQTICDMCI 401 (457)
Q Consensus 326 aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~---~-~~~~i~~~~~~~~~~~~~~~~~~~~~l~ 401 (457)
-.....|-+ -+.......+-+......+++ .|+++..... + -+..+.++++. ...++|+..+
T Consensus 266 R~~~QGlFl---AP~vV~eAlKgaif~A~~fe~----lG~~v~P~~~~~R~DiIQai~l~~~e-------~l~~FC~~iQ 331 (403)
T PF06838_consen 266 RLMFQGLFL---APHVVGEALKGAIFAAALFEK----LGFEVSPKPDDPRSDIIQAIELGSPE-------KLIAFCQGIQ 331 (403)
T ss_dssp HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH----TT-EEES-TTS--SSS-EEEE-SSHH-------HHHHHHHHHH
T ss_pred HHHHhHHhh---chHHHHHHHHHHHHHHHHHHH----cCCcCCCCCCCCCCceEEEEECCCHH-------HHHHHHHHHH
Confidence 111111110 122222232333333444555 7888753322 2 35567777765 7778888887
Q ss_pred Hc
Q psy15447 402 QA 403 (457)
Q Consensus 402 ~~ 403 (457)
+.
T Consensus 332 ~~ 333 (403)
T PF06838_consen 332 AA 333 (403)
T ss_dssp HT
T ss_pred hc
Confidence 65
No 381
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.11 E-value=2.4e-08 Score=105.55 Aligned_cols=310 Identities=11% Similarity=0.114 Sum_probs=184.1
Q ss_pred eeeEEeecCCccCCCCChhhH-HHHHHHHHhcC----CCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIE-KCAIDCIDKNG----VGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFST 152 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~-~a~~~~l~~~~----~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a 152 (457)
+.+..|.+.+|.++- -|.++ +.+ +.+-+ ..+.-+-..+|..+...+++..+++++|.+ .+=++..++.+
T Consensus 78 ~~~~~fiG~G~y~~~-~P~vi~~~i---~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~ 153 (954)
T PRK12566 78 QVWTSLIGMGYHGTV-TPTVILRNV---LENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAA 153 (954)
T ss_pred CCccccccccccCCc-CcHHHHHHH---HhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHH
Confidence 335556665555543 24433 333 33322 123333345678888899999999999988 44566666654
Q ss_pred HHHHHHhh---cCCCCEEEEeCcccHHHHHHHH----hcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEec
Q psy15447 153 SASAIAAY---VKRNDAVFVDENINFAIQTGLI----ASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEG 225 (457)
Q Consensus 153 ~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~----~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~ 225 (457)
-++++.+. .++...+++++..|+.+...++ ..|.+++. +++++.+. +.+..|++..
T Consensus 154 aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~------~~~~~~~~-----------~~~~~v~vq~ 216 (954)
T PRK12566 154 AEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV------DAVDNLAA-----------HAVFGALLQY 216 (954)
T ss_pred HHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE------cchhhcCC-----------CCEEEEEEEC
Confidence 44333222 2235679999999998776443 34555553 33433321 3466777766
Q ss_pred CCCCCCCCCChHHHHHHHHHcCcEEEEEc-CcccccccCCCCccccccCCCCCCccEEEecCccccc------Cc-ccEE
Q psy15447 226 VYMNSADICPLKDILSLRSKYQARIFVDE-SVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG------SV-GGFC 297 (457)
Q Consensus 226 v~~~~G~i~~l~~i~~l~~~~g~~li~DE-a~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg------~~-gG~v 297 (457)
++ ..|.+.++++|.+++|+.|+++|+-- --+.+.+-+.| .+ ++||+++ -++.|| ++ .||+
T Consensus 217 P~-~~G~i~d~~~i~~~~h~~gal~~~~~d~laL~ll~~Pg-----e~-----GADI~vG-~~Q~fGvp~~~GGP~ag~~ 284 (954)
T PRK12566 217 PD-THGEIRDLRPLIDQLHGQQALACVAADLLSLLVLTPPG-----EL-----GADVVLG-STQRFGVPMGYGGPHAAYF 284 (954)
T ss_pred CC-CceEEccHHHHHHHHHHcCCEEEEEeCHHHHhCCCChh-----hc-----CCcEEee-CCCcCCCCCCCCCCCeeee
Confidence 65 56999999999999999999876432 23444443222 23 4589876 355444 22 2788
Q ss_pred EecHHHHHHHHh----------hCCccee--------------cCC-C-cHHHHHHHHHHHH-HHhh---CcHHHHHHHH
Q psy15447 298 VGSSYIIEHHRL----------SGSGYCF--------------SAS-L-PPFLAVAANKALH-LLKA---NPSLLTKLRE 347 (457)
Q Consensus 298 ~~~~~~~~~~~~----------~~~~~~~--------------~~~-~-~~~~~aaa~a~l~-~~~~---~~~~~~~l~~ 347 (457)
++++++...+.- ....|.. +.+ . +...+|. .+++- .+.. ..++.++...
T Consensus 285 a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~-~a~~Y~~~~Gp~Gl~~ia~~~~~ 363 (954)
T PRK12566 285 ACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLAN-IAGFYAVYHGPEGLKRIAQRVHR 363 (954)
T ss_pred eehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHH-HHHHHHHHhChHHHHHHHHHHHH
Confidence 988887766510 0011110 111 1 2222222 22221 1211 1234556777
Q ss_pred HHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEE
Q psy15447 348 KCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRIT 427 (457)
Q Consensus 348 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~ 427 (457)
++.++.+.|.+ .|+++....-...+.+.+ .. .+.++.++..++|+-++... .+.+.++
T Consensus 364 ~a~~l~~~l~~----~g~~~~~~~fF~~~~v~~--~~-------~~~~~~~~a~~~~~n~r~~~---------~~~~~~s 421 (954)
T PRK12566 364 LTAILAAGLEA----KGIKRLNRHFFDTLTLEV--GG-------AQAAIIESAEAARINLRILG---------RGRLGVS 421 (954)
T ss_pred HHHHHHHHHHh----cCCccccCCccceEEEEc--cC-------CHHHHHHHHHHCCCeeEEeC---------CCeEEEE
Confidence 88899999988 788775332222333344 21 24468888889999887643 4689999
Q ss_pred ecCCCCHHHHHHHHHHHH
Q psy15447 428 CNISHTEQDMNSLIETLC 445 (457)
Q Consensus 428 ~~~~~t~edi~~~~~~l~ 445 (457)
+.-++|++|++.+++++.
T Consensus 422 ~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 422 LDETCDEATVARLFDIFL 439 (954)
T ss_pred eCCCCCHHHHHHHHHHhc
Confidence 999999999999999984
No 382
>KOG2040|consensus
Probab=99.09 E-value=8e-09 Score=101.88 Aligned_cols=303 Identities=13% Similarity=0.121 Sum_probs=187.7
Q ss_pred ccChHHHHHHHHHHHhhcCCCcEEE-ecccHH---HHHHHHHhhc-CCC----CEEEEeCcccHHHHHHHHhcCCeEEEe
Q psy15447 121 YGTNVVHLDLENDIASFMGLEETAL-YSFGFS---TSASAIAAYV-KRN----DAVFVDENINFAIQTGLIASRCKVQYF 191 (457)
Q Consensus 121 ~g~~~~~~~l~~~la~~~g~~~~i~-~~sG~~---a~~~ai~a~~-~~g----d~v~~~~~~h~~~~~~~~~~g~~~~~~ 191 (457)
.|......+|++.|+++.|.+..-+ -+||.. |-..+|+++. .+| .+-+++...|+.....+.+.|-+++++
T Consensus 578 qGY~~lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV 657 (1001)
T KOG2040|consen 578 QGYQQLFTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPV 657 (1001)
T ss_pred hhHHHHHHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEe
Confidence 3557788999999999999987654 467764 4556777764 233 367889999999888999999998887
Q ss_pred cCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC-hHHHHHHHHHcCcEEEEEcCcccccccCCC
Q psy15447 192 KHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP-LKDILSLRSKYQARIFVDESVSFGTLGSTG 265 (457)
Q Consensus 192 ~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~-l~~i~~l~~~~g~~li~DEa~~~g~~g~~g 265 (457)
... |+.+|+...+++. ++.+++++.-+. ..|...+ ++++.++.++||--+.+|.+..--..|-..
T Consensus 658 ~~~~~G~id~~dLk~kaekh~--------~~Laa~MvTYPS-T~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~ 728 (1001)
T KOG2040|consen 658 GCDANGNIDMVDLKAKAEKHK--------DNLAALMVTYPS-THGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCR 728 (1001)
T ss_pred eccCCCCccHHHHHHHHHHhh--------hhhheeEEeccc-ccccccccHHHHHHHHHhcCCEEEecCCCccceecccC
Confidence 643 7889988887765 456677666554 3466655 999999999999999999974311122111
Q ss_pred CccccccCCCCCCccEEEecCcccccC---cc----cEEEecHHHHHHHHhhC---------CcceecCCCcHHHHHHH-
Q psy15447 266 HGVTEYFGVSTEEVDMIIGSLEHALGS---VG----GFCVGSSYIIEHHRLSG---------SGYCFSASLPPFLAVAA- 328 (457)
Q Consensus 266 ~~~~~~~~~~~~~~Di~~~s~sK~lg~---~g----G~v~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~aaa- 328 (457)
.| .+| .|+.--.++|+|+. .| |-+..++.++.++.... .....+.+..|...+..
T Consensus 729 pG---d~G-----aDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~IL 800 (1001)
T KOG2040|consen 729 PG---DIG-----ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALIL 800 (1001)
T ss_pred Cc---ccc-----ccceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceee
Confidence 11 123 25666689999952 12 33444555554442110 00011111122221111
Q ss_pred ---HHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCe---EEEEecCCcchHHHHHHHHHHHHHH
Q psy15447 329 ---NKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPL---KYLYLQKSDDEVASKKLLQTICDMC 400 (457)
Q Consensus 329 ---~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~l 400 (457)
-+=++++... .+.-+-..-|+.|+.++|+. .-.+-+. ...+.+ +.+.+..-+ ..+...+.+++++|
T Consensus 801 pISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~---hYkil~~-~~~~~vaHEFIlD~r~fK--~~agieavDvAKRL 874 (1001)
T KOG2040|consen 801 PISWAYIKMMGSGGLKDASKIAILNANYMAKRLES---HYKILFR-GENGLVAHEFILDLRPFK--KTAGIEAVDVAKRL 874 (1001)
T ss_pred hhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhh---ccceeEe-cCCcceeeeeeeechhhc--cccCCcHHHHHHHH
Confidence 1224444332 22223344578899999987 2333333 222322 222221111 11112567899999
Q ss_pred HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 401 IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 401 ~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
++.|+......+| ..+.+.|-|+-.-+.+|+|++++++-.+.+++.
T Consensus 875 ~DYgFHaPTmswP------V~gtLMIEPTESE~k~ElDRfcdAliSIreEI~ 920 (1001)
T KOG2040|consen 875 MDYGFHAPTMSWP------VAGTLMIEPTESEDKAELDRFCDALISIREEIA 920 (1001)
T ss_pred HhccCCCCccccc------cCCceEeccCccccHHHHHHHHHHHHHHHHHHH
Confidence 9999987666654 358999999998999999999999877766553
No 383
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.06 E-value=1.5e-07 Score=87.13 Aligned_cols=311 Identities=15% Similarity=0.143 Sum_probs=172.8
Q ss_pred HHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcC-----CCCEEEEeCcccHHH-HHHHHhcCCeEEE----------
Q psy15447 127 HLDLENDIASFMGLEETALYSFGFSTSASAIAAYVK-----RNDAVFVDENINFAI-QTGLIASRCKVQY---------- 190 (457)
Q Consensus 127 ~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~-----~gd~v~~~~~~h~~~-~~~~~~~g~~~~~---------- 190 (457)
...|++...+.+|.+..+-+..|-.|-...+..+.+ +|...++...+|..+ .......|+..+-
T Consensus 81 ~~~L~~avkdifGfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~ 160 (471)
T COG3033 81 YYALADAVKDIFGFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTE 160 (471)
T ss_pred HHHHHHHHHHhcCceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcCCcccccccccccccc
Confidence 367888999999998888888887765555555544 444445555566554 4445566654332
Q ss_pred ----ecCC-CHHHHHHHHHhhchhcccCCCCccEEEEEe-cCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCc-cccc
Q psy15447 191 ----FKHN-NMQHLEELLRQQDERDTLNSKVTKKFIIVE-GVYMNSADICP---LKDILSLRSKYQARIFVDESV-SFGT 260 (457)
Q Consensus 191 ----~~~~-d~~~le~~l~~~~~~~~~~~~~~~~~vi~e-~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~-~~g~ 260 (457)
|..| |++.|++.|++... +++..|++. +.++.+|.... ++++++||++|++.++.|.+. ..-.
T Consensus 161 ~~~pFKGd~D~~kLe~lidevG~-------~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENa 233 (471)
T COG3033 161 VKYPFKGNFDLEKLERLIDEVGA-------DNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENA 233 (471)
T ss_pred ccCCCCCccCHHHHHHHHHHhCc-------ccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhh
Confidence 1122 78999999998763 445554443 33334565444 789999999999999999863 1111
Q ss_pred c--cCCCCccccccCCC------CCCccEEEecCcc-cccCcccEEEecHH----HHHHHHhhC---Ccc-eecCCCcHH
Q psy15447 261 L--GSTGHGVTEYFGVS------TEEVDMIIGSLEH-ALGSVGGFCVGSSY----IIEHHRLSG---SGY-CFSASLPPF 323 (457)
Q Consensus 261 ~--g~~g~~~~~~~~~~------~~~~Di~~~s~sK-~lg~~gG~v~~~~~----~~~~~~~~~---~~~-~~~~~~~~~ 323 (457)
+ -....+. ..+-+. ..-.|-.+.|.-| ++-..||+++.+++ +.+..+... .++ +|+ ++..-
T Consensus 234 YFIk~rE~gY-rd~sI~~IarEm~sYaD~~~mS~KKD~lvnmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYG-gl~Gr 311 (471)
T COG3033 234 YFIKQREPGY-RDWSIEEIAREMYSYADGCTMSAKKDGLVNMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYG-GLAGR 311 (471)
T ss_pred hhhhhcCccc-ccccHHHHHHHHHhhhhhheeeccccceeccccEEEecCccHHHHHHHHHhheEeeccccccC-cccch
Confidence 1 0000000 001110 0011333444444 23346899888765 444443221 111 122 12211
Q ss_pred HHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHH-
Q psy15447 324 LAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCI- 401 (457)
Q Consensus 324 ~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~- 401 (457)
.+.+....|..--+.+ ..++--+..+||.+.|.+ .|+++..+.+++-+.+....-.+. +.+.-.++.++-+|-
T Consensus 312 dmealAvGL~e~~~~~-yl~~Rv~Qv~YL~~~l~~----~GVpi~~paGGHavfvda~~~lphip~eqFpaqala~ely~ 386 (471)
T COG3033 312 DMEALAVGLREGVNFD-YLAHRVAQVQYLADGLEE----AGVPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYK 386 (471)
T ss_pred hHHHHHHHHHHhcCcH-HHHHHHHHHHHHHHHHHh----cCCeeEecCCCceEEeehhhhcCCCChhhCcHHHHHHHHHH
Confidence 1111111222211222 333344567899999999 899888777888777654432111 222223455655554
Q ss_pred HcCeeEeccccCcc--------ccCCCCCeEEEEec-CCCCHHHHHHHHHHHHHHHHHh
Q psy15447 402 QAGFAITCPSHLDQ--------EAKKQKPSIRITCN-ISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 402 ~~Gi~v~~~~~~~~--------~~~~~~~~lRi~~~-~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+.||-..-.+.... ..+..-+.+|+.++ .+.|.+.+|.++++++++.+..
T Consensus 387 e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~~ 445 (471)
T COG3033 387 EAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKENA 445 (471)
T ss_pred HhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhcc
Confidence 44776643322111 11223467999975 5569999999999999887654
No 384
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.01 E-value=7.4e-10 Score=104.44 Aligned_cols=242 Identities=16% Similarity=0.190 Sum_probs=56.0
Q ss_pred ChhhHHHHHHHHHhcCCCC----CCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeC
Q psy15447 96 NPDIEKCAIDCIDKNGVGS----CGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDE 171 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~----~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~ 171 (457)
++++.+++.+.+..|..-- .|.| ..-+..+++.+++++|.+.++++++...|+..++.++.. +..|++++
T Consensus 19 ~~~a~~a~~~~a~~Y~nLE~dl~~G~R-----g~R~~~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la~-~~EvIvsR 92 (367)
T PF03841_consen 19 SEEAIEAVAEVASGYSNLEYDLETGKR-----GSRYAHVEELLCELTGAEAALVVNNNAAAVLLALNTLAK-GKEVIVSR 92 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccc-----ccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 4667777777766553211 1111 122456788899999999999999999999988887764 45566655
Q ss_pred ccc------HHHHHHHHhcCCeEEEecCCC---HHHHHHHHHhhchhcccCCCCccEEEE-Ee-cCCCCCC--CCCChHH
Q psy15447 172 NIN------FAIQTGLIASRCKVQYFKHNN---MQHLEELLRQQDERDTLNSKVTKKFII-VE-GVYMNSA--DICPLKD 238 (457)
Q Consensus 172 ~~h------~~~~~~~~~~g~~~~~~~~~d---~~~le~~l~~~~~~~~~~~~~~~~~vi-~e-~v~~~~G--~i~~l~~ 238 (457)
+.- +.+..-++.+|++++.+...+ +++.+++|.+ ++++++ +. +-+...| ...++++
T Consensus 93 GelVeiGgsFRip~vm~~sGa~lvEVGttN~t~~~Dye~AI~e-----------~Ta~ll~Vh~Sn~~i~GFt~~~~~~e 161 (367)
T PF03841_consen 93 GELVEIGGSFRIPDVMRQSGARLVEVGTTNRTHLSDYEKAITE-----------NTAALLKVHTSNFRIQGFTGEVSLEE 161 (367)
T ss_dssp -------------------------------------------------------------------------------H
T ss_pred ccccccccccccccccccccccccccccccccccccccccccc-----------cccccccccccccccccccccccHHH
Confidence 532 224456777888887776543 5666666654 344443 33 2222333 2357999
Q ss_pred HHHHHHHcCcEEEEEcCccccc----ccCCCCccccccCCCCCCccEEEecCcccccC-cccEEEecHHHHHHHHhhCCc
Q psy15447 239 ILSLRSKYQARIFVDESVSFGT----LGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS-VGGFCVGSSYIIEHHRLSGSG 313 (457)
Q Consensus 239 i~~l~~~~g~~li~DEa~~~g~----~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~-~gG~v~~~~~~~~~~~~~~~~ 313 (457)
+.+++++|++.+|+|-.-+... +|-..... .+..-..++|+++.|-.|.+|+ ..|.++|++++++.++.....
T Consensus 162 l~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~--v~~~~~~GaDlV~fSGdKlLGGPQaGiI~Gkk~lI~~lk~~pl~ 239 (367)
T PF03841_consen 162 LAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPT--VQEYLAAGADLVTFSGDKLLGGPQAGIIVGKKELIEKLKKHPLG 239 (367)
T ss_dssp HHHHHHHHT--EEEE-TTHHHHHHHTT------------CCCCT-SEEEEETTSSSSS-S-EEEEEEHHHHHHHHHHHHT
T ss_pred HHHHHhhcCCcEEEECCCCCCcCcccccCccccH--HHHHhhcCCCEEEEECCCcCCCCCeEEEEeCHHHHHHHhhCCCc
Confidence 9999999999999997642110 11111110 1112235789999999999975 569999999999998764322
Q ss_pred ceecCCCcHHHHHHHHHHHHHHhhC-------c------HHHHHHHHHHHHHHHHhhc
Q psy15447 314 YCFSASLPPFLAVAANKALHLLKAN-------P------SLLTKLREKCNTMHSLLSQ 358 (457)
Q Consensus 314 ~~~~~~~~~~~~aaa~a~l~~~~~~-------~------~~~~~l~~~~~~l~~~L~~ 358 (457)
. ..-..-...++..++|+..... + .-.+.++++++.+...|+.
T Consensus 240 R--alrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~ 295 (367)
T PF03841_consen 240 R--ALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKA 295 (367)
T ss_dssp T--T-B--HHHHHHHHHHHHH-------------------------------------
T ss_pred c--eEeeCHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccc
Confidence 1 1123667777777887765421 1 1224455566666666655
No 385
>KOG3846|consensus
Probab=98.93 E-value=6.4e-07 Score=81.29 Aligned_cols=337 Identities=15% Similarity=0.126 Sum_probs=195.8
Q ss_pred ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCC----C-CCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEeccc
Q psy15447 77 INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGV----G-SCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFG 149 (457)
Q Consensus 77 ~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~----~-~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG 149 (457)
.+.+..+-+++|+ +|+. .....+.+.+.+++|.- + ..|-+.+.... +-.-..++.+.|.. ++-+.++=
T Consensus 63 ~~d~~~iYlcGNS-LGLm-PK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~D---e~il~l~~~iVGA~e~EvavmNsL 137 (465)
T KOG3846|consen 63 SDDKPVIYLCGNS-LGLM-PKSTRNSINAELDKWAKCAVEGHFKGKVPWVSID---EPILPLLAPIVGAQENEVAVMNSL 137 (465)
T ss_pred CCCCCeEEEeccc-cccC-chhhHhHHHHHHHHHHhhhhhcccccccceeecc---hhhhhhhhhhccCCchhhhhHhhh
Confidence 3567788888764 4775 45666777777777531 1 11111111112 22344566777754 33444554
Q ss_pred HHHHHHHHHhhcCCCC---EEEEeCc----ccHHHHHHHHhcCCeEE----EecCC------CHHHHHHHHHhhchhccc
Q psy15447 150 FSTSASAIAAYVKRND---AVFVDEN----INFAIQTGLIASRCKVQ----YFKHN------NMQHLEELLRQQDERDTL 212 (457)
Q Consensus 150 ~~a~~~ai~a~~~~gd---~v~~~~~----~h~~~~~~~~~~g~~~~----~~~~~------d~~~le~~l~~~~~~~~~ 212 (457)
+.-+...+-.+.+|.. .|+.... .|.++...+++.|..+. .+... ..+++-+.|+...
T Consensus 138 TvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkng----- 212 (465)
T KOG3846|consen 138 TVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNG----- 212 (465)
T ss_pred hhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcC-----
Confidence 4444444555655442 3444433 36777777788775431 11111 2344445555433
Q ss_pred CCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-
Q psy15447 213 NSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG- 291 (457)
Q Consensus 213 ~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg- 291 (457)
+.+++|...+++--||..-++.+|-+.-+..|+++=.|=+|++|-..- .... +++|+.+.+--|.+.
T Consensus 213 ---DeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL----~LHd-----WgVDFACWCSYKYlna 280 (465)
T KOG3846|consen 213 ---DEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPL----QLHD-----WGVDFACWCSYKYLNA 280 (465)
T ss_pred ---CeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCce----EEee-----cCCceEEEeeeccccc
Confidence 678899999999999999999999977788899999999998875431 1112 455888888888772
Q ss_pred ---CcccEEEecHHHHHHHHh---------------------hCCcceecCCCcHHHH-HHHHHHHHHHhhC--cHHHHH
Q psy15447 292 ---SVGGFCVGSSYIIEHHRL---------------------SGSGYCFSASLPPFLA-VAANKALHLLKAN--PSLLTK 344 (457)
Q Consensus 292 ---~~gG~v~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~-aaa~a~l~~~~~~--~~~~~~ 344 (457)
+.||..+-.+..-+.... ......|..+.||+.. ++...+|+++.+- ++++++
T Consensus 281 GaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkr 360 (465)
T KOG3846|consen 281 GAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKR 360 (465)
T ss_pred CCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhh
Confidence 334555544322222110 0011123333355544 4445678887654 233333
Q ss_pred HHHHHHHHHHHhhccccc--------CCeEEecc----CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc
Q psy15447 345 LREKCNTMHSLLSQHKVT--------QRFLVQGH----RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH 412 (457)
Q Consensus 345 l~~~~~~l~~~L~~~~~~--------~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~ 412 (457)
..-+..|+...++..... +-+.+..+ ..+....+.+..+ ...+.++|-++|+.+....
T Consensus 361 S~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp---------~~~vfqeL~krGv~~DkR~- 430 (465)
T KOG3846|consen 361 SLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSP---------TPKVFQELHKRGVIGDKRR- 430 (465)
T ss_pred hhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCCC---------chHHHHHHHHcCeeccccC-
Confidence 333344444444331100 11223222 1244455555443 2478999999999875433
Q ss_pred CccccCCCCCeEEEEe-cCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 413 LDQEAKKQKPSIRITC-NISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 413 ~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
+|.+|++| ++.+|--|+-.++++|.+++..+.+
T Consensus 431 --------PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~es 464 (465)
T KOG3846|consen 431 --------PNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLES 464 (465)
T ss_pred --------CCceEeecchhhccHHHHHHHHHHHHHHHHHhhc
Confidence 58999997 8889999999999999999887764
No 386
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.80 E-value=2.5e-06 Score=79.96 Aligned_cols=309 Identities=15% Similarity=0.154 Sum_probs=173.7
Q ss_pred ChhhHHHHHHHHHhc-CCCC----CCCCCcccChHHHHHHHHHHHhhcCCC---cEEEecccHH-HHHHHHHhhcCCCCE
Q psy15447 96 NPDIEKCAIDCIDKN-GVGS----CGPRGFYGTNVVHLDLENDIASFMGLE---ETALYSFGFS-TSASAIAAYVKRNDA 166 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~-~~~~----~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~-a~~~ai~a~~~~gd~ 166 (457)
+|++.+.+.+.+..+ |.+. ...|.-. -...+.+.++.+.++++.+ +++|+.+|.. +..++...+...+..
T Consensus 17 p~~vL~~a~~e~~~~~g~g~svme~SHRsk~-~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~~~~ 95 (365)
T COG1932 17 PPEVLQQAQKELLDWNGLGMSVMEISHRSKE-FKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGKRGT 95 (365)
T ss_pred CHHHHHHHHHHHhhhccCCcceeeeccccHH-HHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhhcccCc
Confidence 477777777776654 2111 1122211 1456677888899999866 4566665554 444444444444332
Q ss_pred EEEeCcccH--HHHHHHHhcC-CeE-----EEecCC---CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC
Q psy15447 167 VFVDENINF--AIQTGLIASR-CKV-----QYFKHN---NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP 235 (457)
Q Consensus 167 v~~~~~~h~--~~~~~~~~~g-~~~-----~~~~~~---d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~ 235 (457)
-.++..++. +.-.+-.+.. ..+ ...++. +++.++ +. ++.+.|...+-...+|...|
T Consensus 96 ~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~-----------~~~ayv~~~~NeTi~Gv~v~ 162 (365)
T COG1932 96 DYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FS-----------DNDAYVHFCWNETISGVEVP 162 (365)
T ss_pred eeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cC-----------CCccEEEEecCCcccceEcc
Confidence 022222222 2222222222 111 111111 222221 11 22344555554444566554
Q ss_pred -hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhhC--
Q psy15447 236 -LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLSG-- 311 (457)
Q Consensus 236 -l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~~-- 311 (457)
.+.+ .. +.++++|-+-.++ ++ .++-.+.|++..+..|.+|+.| +.++.++++++......
T Consensus 163 ~~p~~---~~--~~~~v~D~SS~il--sr---------~iDvsk~dviyagaQKnlGpaGltvvIvr~~~l~r~~~~~~P 226 (365)
T COG1932 163 ELPDI---GS--DGLLVADASSAIL--SR---------PIDVSKYDVIYAGAQKNLGPAGLTVVIVRPDLLERAESYTLP 226 (365)
T ss_pred CCCCC---CC--CceEEEecccHHh--cC---------CCChhHcceEEEehhhccCccceEEEEEcHHHHhcccccCCc
Confidence 2221 11 1789999875442 21 2333566889999999999877 67888998888774421
Q ss_pred ----------CcceecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC-CCeEE
Q psy15447 312 ----------SGYCFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD-TPLKY 377 (457)
Q Consensus 312 ----------~~~~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~-~~~~~ 377 (457)
...+|.+ +|.++......+++.+++. +.+.++-+++.+.|.+.+++.....+. +..... ...++
T Consensus 227 ~if~y~~~~~~~s~yNT-Pptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~-v~~~~RS~mnV~ 304 (365)
T COG1932 227 SIFDYLTHADNGSMYNT-PPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNL-VAKANRSRMNVT 304 (365)
T ss_pred hHhhchhhhccCCccCC-cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccc-cchhhccceeEE
Confidence 1112221 2334444555667777765 567788889999999999882211111 111112 23455
Q ss_pred EEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 378 LYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 378 i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
+.+.++. ....+.+++.++|+..-.++ ...+.+|+++..++.-++++.+++.++.+.++
T Consensus 305 f~~~~~~-------ld~~fv~eae~~gl~~lkGh-------r~vgGmRasiynA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 305 FTLVDAE-------LDKGFVAEAEAAGLIYLKGH-------RSVGGLRASIYNAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred EEcCcHH-------HHHHHHHHHHHcCCceeccc-------cCCCceeeeeecCCCHHHHHHHHHHHHHHHHh
Confidence 6666543 55678888888887665543 12345999999999999999999999988664
No 387
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.72 E-value=1.6e-06 Score=78.57 Aligned_cols=169 Identities=18% Similarity=0.200 Sum_probs=107.4
Q ss_pred CcccChHH-HHHHHHHHHhhcCCCcEEE---ecccHHHHHHHHHhhcCCCCEEEEeCcc-cHHHHHHHHhcC--------
Q psy15447 119 GFYGTNVV-HLDLENDIASFMGLEETAL---YSFGFSTSASAIAAYVKRNDAVFVDENI-NFAIQTGLIASR-------- 185 (457)
Q Consensus 119 ~~~g~~~~-~~~l~~~la~~~g~~~~i~---~~sG~~a~~~ai~a~~~~gd~v~~~~~~-h~~~~~~~~~~g-------- 185 (457)
..||..+. +.-|++-.|+.+|.+.+++ +-||++|+..|+-...+|||.++.--+. |.....-+-+.|
T Consensus 58 tGYGydD~GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~d 137 (416)
T COG4100 58 TGYGYDDLGRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKD 137 (416)
T ss_pred CCCCccccchhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHH
Confidence 34555554 4558899999999998754 5799999999999999999987654333 333222221111
Q ss_pred --CeEEEec-----CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCC----CCCCCCChHHHHHHHHHc--CcEEEE
Q psy15447 186 --CKVQYFK-----HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM----NSADICPLKDILSLRSKY--QARIFV 252 (457)
Q Consensus 186 --~~~~~~~-----~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~----~~G~i~~l~~i~~l~~~~--g~~li~ 252 (457)
..-..++ ..|.+.+...+. +++++|.+.-..+ |+=.+..++++.++.++- ++++.+
T Consensus 138 fgi~Y~~v~Lt~~gkiD~~~v~~~i~-----------~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFV 206 (416)
T COG4100 138 FGIKYKAVPLTADGKIDIQAVKTAIS-----------DRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFV 206 (416)
T ss_pred hCcceeecccccCCcccHHHHHHhcC-----------ccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEE
Confidence 1111222 126677777664 3567776653221 111122355666666654 789999
Q ss_pred EcCcccccccCCCCccccccCCCCCCccEEEecCcccccC----cccEEEecHHHHHHH
Q psy15447 253 DESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS----VGGFCVGSSYIIEHH 307 (457)
Q Consensus 253 DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~ 307 (457)
|.+|+..+- ...-..-++|++.+|+-|.-|+ .|||++|++++++.-
T Consensus 207 DNCYGEFvE---------~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~ 256 (416)
T COG4100 207 DNCYGEFVE---------EKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAA 256 (416)
T ss_pred eccchhhhh---------ccCccccchhhhccceeeCCCCceeeccceeechHHHHHhh
Confidence 999875431 1111113568999999999864 589999999998865
No 388
>KOG0628|consensus
Probab=98.71 E-value=3.4e-05 Score=74.20 Aligned_cols=280 Identities=12% Similarity=0.111 Sum_probs=163.1
Q ss_pred EEEecccHHHHHHHHHhhc-------CCC-----------C-EEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHH
Q psy15447 143 TALYSFGFSTSASAIAAYV-------KRN-----------D-AVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQH 198 (457)
Q Consensus 143 ~i~~~sG~~a~~~ai~a~~-------~~g-----------d-~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~ 198 (457)
.++..|+++++..++.+.. +.+ + ++..++..|.++.++..+.+.+.+.++.. +.+.
T Consensus 142 GviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i~~VklR~l~td~n~~mr~~~ 221 (511)
T KOG0628|consen 142 GVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACLIAGVKLRALPTDENFGMRGDT 221 (511)
T ss_pred ceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHhHhhcceeEEEeecccCcCCCHHH
Confidence 4677788888776664321 111 2 34457778999999999999887766643 5788
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCC-CCCCCCChHHHHHHHHHcCcEEEEEcCccccccc-CCCCccccccCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYM-NSADICPLKDILSLRSKYQARIFVDESVSFGTLG-STGHGVTEYFGVST 276 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~-~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g-~~g~~~~~~~~~~~ 276 (457)
|+++|++..+. +-+-++++-++-. .+-...++.+|..+|+++|+||++|.+|+...+. +-.+++ .-|+
T Consensus 222 L~~AIe~D~ar------GlIPf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l--~rGi-- 291 (511)
T KOG0628|consen 222 LRKAIEEDIAR------GLIPFFVCATLGTTSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYL--MRGI-- 291 (511)
T ss_pred HHHHHHHHHhC------CCccEEEEEeecCccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHH--hhcc--
Confidence 99888875431 2333444443332 2234467999999999999999999999754332 111111 1234
Q ss_pred CCccEEEecCcccccC----cc-----c-----EEEecHHHHHHHHhh-CCcceecC-----CCcHHHHHHHHHHHHHHh
Q psy15447 277 EEVDMIIGSLEHALGS----VG-----G-----FCVGSSYIIEHHRLS-GSGYCFSA-----SLPPFLAVAANKALHLLK 336 (457)
Q Consensus 277 ~~~Di~~~s~sK~lg~----~g-----G-----~v~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~aaa~a~l~~~~ 336 (457)
+.+|-+-...||++-. .. | +.-.++...++-... ...|.+-. ..-.+-.+.. ++.+.
T Consensus 292 e~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv---~R~~G 368 (511)
T KOG0628|consen 292 EYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFV---LRSYG 368 (511)
T ss_pred hhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhhccCCCccccccccccchhhHHHHHH---HHHHh
Confidence 3456666677888731 11 2 111222222222111 11111100 0111111111 22222
Q ss_pred hCcHHHHHHH---HHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcC-eeEecccc
Q psy15447 337 ANPSLLTKLR---EKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAG-FAITCPSH 412 (457)
Q Consensus 337 ~~~~~~~~l~---~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~G-i~v~~~~~ 412 (457)
- +.++++++ ++++.|.+.+.+ .+.+++..+..-.++.+++++.. ....++.+++...| |.+.+..
T Consensus 369 v-e~lq~~iR~h~~La~~fe~lv~~---d~~FE~~~~~~lgLvcFRlk~~N------~~ne~Ll~~in~~g~i~l~~~~- 437 (511)
T KOG0628|consen 369 V-ENLQNYIREHVRLAKEFETLVRA---DPRFEIVNKRILGLVCFRLKGDN------EINEALLNRLNSSGRIHLVPAS- 437 (511)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHhhc---CCcceeecccccceeEEeecCCc------HHHHHHHHHHHhcCcEEEEEee-
Confidence 1 22334433 456677776666 57788876655667778877653 25667888888774 6666554
Q ss_pred CccccCCCCCeEEEEecCCC-CHHHHHHHHHHHHHHHHHh
Q psy15447 413 LDQEAKKQKPSIRITCNISH-TEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 413 ~~~~~~~~~~~lRi~~~~~~-t~edi~~~~~~l~~~~~~~ 451 (457)
..+.-.+|++++... +++|+++.-+.|.+..+.+
T Consensus 438 -----l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l 472 (511)
T KOG0628|consen 438 -----LHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADEL 472 (511)
T ss_pred -----ecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Confidence 234557999986554 5688999999998887764
No 389
>KOG1412|consensus
Probab=98.25 E-value=9.1e-05 Score=67.77 Aligned_cols=271 Identities=13% Similarity=0.063 Sum_probs=144.3
Q ss_pred EecccHHHHHHHH---HhhcCCCCEEEEeCcccHHHHHHHHhcC-CeEEEecCC-------CHHHHHHHHHhhchhcccC
Q psy15447 145 LYSFGFSTSASAI---AAYVKRNDAVFVDENINFAIQTGLIASR-CKVQYFKHN-------NMQHLEELLRQQDERDTLN 213 (457)
Q Consensus 145 ~~~sG~~a~~~ai---~a~~~~gd~v~~~~~~h~~~~~~~~~~g-~~~~~~~~~-------d~~~le~~l~~~~~~~~~~ 213 (457)
-.-||+.|+..+- ..++. ...|.++.+.+.....-+.-.| .++..+++- |.+.+-..|+..
T Consensus 104 QslsGTGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~A------- 175 (410)
T KOG1412|consen 104 QSLSGTGALRIAADFLATFYN-KNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESA------- 175 (410)
T ss_pred eeccccchhhhhHHHHHHhcc-cceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhC-------
Confidence 3457777766553 23344 4458888888776666666666 344444432 445444444432
Q ss_pred CCCccEEEEEec-CCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccccCCCCCCccEEEecCcc
Q psy15447 214 SKVTKKFIIVEG-VYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYFGVSTEEVDMIIGSLEH 288 (457)
Q Consensus 214 ~~~~~~~vi~e~-v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~~~~~~~~Di~~~s~sK 288 (457)
+...++++.. -+||||.-+. ..+|.+..++.+.+-++|-+|-...-|...+-. +-.+.++....-++..||+|
T Consensus 176 --Pe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaK 253 (410)
T KOG1412|consen 176 --PEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAK 253 (410)
T ss_pred --CCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhh
Confidence 2233444444 4788886544 668888889999999999987554455433211 11111221111377899999
Q ss_pred cccCcc---c---EEEecHHHHHHHHhhC---CcceecCCCcHHHHHHHHHHHH---HHhhC----cHHHHHHHHHHHHH
Q psy15447 289 ALGSVG---G---FCVGSSYIIEHHRLSG---SGYCFSASLPPFLAVAANKALH---LLKAN----PSLLTKLREKCNTM 352 (457)
Q Consensus 289 ~lg~~g---G---~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~aaa~a~l~---~~~~~----~~~~~~l~~~~~~l 352 (457)
.+|.-+ | +++.++..+..+.... ....++ ++|.+.+-...+.|. +.++. ..+-.|+.+.+..|
T Consensus 254 NfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~S-NPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aL 332 (410)
T KOG1412|consen 254 NFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWS-NPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTAL 332 (410)
T ss_pred hcccccccccceEEEecChhHHHHHHHHHHHHHhhccC-CCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998643 3 4555555544432211 111233 234444333333332 11111 12234556666677
Q ss_pred HHHhhcccccCC-eEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecC
Q psy15447 353 HSLLSQHKVTQR-FLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNI 430 (457)
Q Consensus 353 ~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~ 430 (457)
++.|.+++ -+| ++-. ..+..++... + ....-++.|.++ .|++...+ ||+++.
T Consensus 333 rd~L~aL~-TPGtWDHI-~~QiGMFSyT--G---------Ltp~qV~~li~~h~vyLl~~G-------------RInisG 386 (410)
T KOG1412|consen 333 RDHLVALK-TPGTWDHI-TQQIGMFSYT--G---------LTPAQVDHLIENHKVYLLSDG-------------RINISG 386 (410)
T ss_pred HHHHHhcC-CCCcHHHH-Hhhccceeec--C---------CCHHHHHHHHHhceEEEecCC-------------cEeeec
Confidence 77766632 122 1111 0122333322 1 112345566654 78776533 455543
Q ss_pred CCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 431 SHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 431 ~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
.+...+|.+..+|+++.+.+..
T Consensus 387 -LN~~NveyVAkAIde~Vr~~~~ 408 (410)
T KOG1412|consen 387 -LNMKNVEYVAKAIDETVRAIKS 408 (410)
T ss_pred -cccccHHHHHHHHHHHHHhhcc
Confidence 5778899999999999887654
No 390
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.17 E-value=0.00013 Score=68.32 Aligned_cols=276 Identities=12% Similarity=0.183 Sum_probs=138.8
Q ss_pred HHHHHHHHHHhh---cC----CCcEEEecccH-HHHHHHHHhhcCC------CCEEEEeCcccHHHHHHHHhcCCeEEEe
Q psy15447 126 VHLDLENDIASF---MG----LEETALYSFGF-STSASAIAAYVKR------NDAVFVDENINFAIQTGLIASRCKVQYF 191 (457)
Q Consensus 126 ~~~~l~~~la~~---~g----~~~~i~~~sG~-~a~~~ai~a~~~~------gd~v~~~~~~h~~~~~~~~~~g~~~~~~ 191 (457)
...+|++.+.++ .| .++-|++.+|+ +-+.+|+-++... --.|+...|+|..+.............+
T Consensus 44 ~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w 123 (363)
T PF04864_consen 44 ISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKW 123 (363)
T ss_dssp S-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEE
T ss_pred ccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccc
Confidence 345555555554 34 23567777776 5556666665422 2368888888888776544443333333
Q ss_pred cCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccc
Q psy15447 192 KHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEY 271 (457)
Q Consensus 192 ~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~ 271 (457)
..+ ..... ... ....-+=++.+++||.|.+-. .+++.-+..+|.|=||-+.-+-+ +..
T Consensus 124 ~Gd-a~~~~---~~~--------~~~~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AYYWPhyTp----I~~- 181 (363)
T PF04864_consen 124 AGD-ASNFK---NSD--------NPSPYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAYYWPHYTP----ITA- 181 (363)
T ss_dssp EEE-CCCGT---T-S---------CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS-------S-
T ss_pred ccc-HHhhc---cCC--------CCCCeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeeeecccccc----cCC-
Confidence 221 11111 110 123345456778889887621 12344566789999976543321 111
Q ss_pred cCCCCCCccEEEecCcccccCcc---cEEE-ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-Cc------H
Q psy15447 272 FGVSTEEVDMIIGSLEHALGSVG---GFCV-GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NP------S 340 (457)
Q Consensus 272 ~~~~~~~~Di~~~s~sK~lg~~g---G~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~------~ 340 (457)
|.+-||++.|+||.-|..| ||.+ -.+++...+...-.-.+.+ .+-=..-.++..|+.+-+ .. .
T Consensus 182 ----~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiG--vS~dsQLRa~kiLk~v~~~~~~~~~~~~ 255 (363)
T PF04864_consen 182 ----PADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIG--VSRDSQLRALKILKVVLDGYGTEKGTED 255 (363)
T ss_dssp -----B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS----HHHHHHHHHHHHHHHHHCCHHTTTTS
T ss_pred ----CCCCceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhccc--CcHHHHHHHHHHHHHHHhcccCCCCccc
Confidence 3445899999999998666 7754 4555655554321111111 122222222222322211 10 1
Q ss_pred H----HHHHHHHHHHHHHHhhcccccCCeEEec-------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc
Q psy15447 341 L----LTKLREKCNTMHSLLSQHKVTQRFLVQG-------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA 403 (457)
Q Consensus 341 ~----~~~l~~~~~~l~~~L~~~~~~~~~~~~~-------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~ 403 (457)
+ ++.++++-+.|++.++.. .-+.+.. .+...+.|+++..+.+ .+....|++.
T Consensus 256 ~F~f~~~~M~~RW~~L~~~~~~S---~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed--------~DC~~~l~~~ 324 (363)
T PF04864_consen 256 IFHFGYSTMRERWEKLRAAVSAS---KRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREED--------EDCYAVLREA 324 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCS---SSEEE---SCEEETTTTCEEE---SEEEEEESSCGG--------SSHHHHHHCT
T ss_pred hHHHHHHHHHHHHHHHHHHHHhc---CceecCcCCchhccccccccCCCCCeEEEecCCccc--------ccHHHHHHhC
Confidence 2 346777778888887762 2233321 1235678888876531 2455667778
Q ss_pred CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 404 GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 404 Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
||+-+.+..+ .....++|++.- .++++.|.+++.|..
T Consensus 325 ~I~tr~G~~f----ga~~ryVRlSml--~~~d~Fd~l~~rL~~ 361 (363)
T PF04864_consen 325 KIITRSGVLF----GADSRYVRLSML--KRDDDFDQLLERLSK 361 (363)
T ss_dssp TEEEEEGGGG----TS-TTEEEEESS--S-HHHHHHHHHHHHC
T ss_pred CcccCCCCcc----CCCCCeEEEecc--CCHHHHHHHHHHHHh
Confidence 9998877653 334679999864 689999999999865
No 391
>KOG2040|consensus
Probab=97.96 E-value=0.002 Score=64.75 Aligned_cols=312 Identities=13% Similarity=0.113 Sum_probs=167.8
Q ss_pred EeecCCccCCCCChhhHHHHHHHHHhcCCC----CCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHH
Q psy15447 84 NFATHNYLSFVENPDIEKCAIDCIDKNGVG----SCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAI 157 (457)
Q Consensus 84 d~~s~~~l~~~~~p~i~~a~~~~l~~~~~~----~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai 157 (457)
.|.+-+|.+..-.+.|. ++.++..++. +.-+...+|..+........++++.|.+ .+-+..-|+.|.++..
T Consensus 121 sfIGmGYyn~~vP~~I~---RNilenp~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaaEAm~ 197 (1001)
T KOG2040|consen 121 SFIGMGYYNTHVPAVIL---RNILENPGWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMANASLLDEGTAAAEAMA 197 (1001)
T ss_pred HhhccccccccCcHHHH---HHhhhCCcceeccCCCchhhhhhhHHHHhhhHHhhhhccCCcccchhhhccchhHHHHHH
Confidence 35555565554223332 3344443432 2222233455555566677788888855 4556667776655443
Q ss_pred Hhh-cCCCCEEEEeCcccHHHHHHHHhc--CCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC
Q psy15447 158 AAY-VKRNDAVFVDENINFAIQTGLIAS--RCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC 234 (457)
Q Consensus 158 ~a~-~~~gd~v~~~~~~h~~~~~~~~~~--g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~ 234 (457)
.+. ..+++.++++..+|+.+...++-. +..+. +...|+++..... +.+.-+++.-+. ..|.+.
T Consensus 198 l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~-v~~~~~~~~~~s~------------~~v~gvlvQYP~-t~G~i~ 263 (1001)
T KOG2040|consen 198 LCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIK-VVVSDIKEADYSS------------KDVSGVLVQYPD-TEGSVL 263 (1001)
T ss_pred HHHhhcccceEEecCCCCcchhhhhhcccccccee-EEecCHHHhhccc------------cceeEEEEEcCC-CCCccc
Confidence 332 344555889999999988765422 22222 2223444332211 344556665544 469999
Q ss_pred ChHHHHHHHHHcCcEEEEEc-CcccccccCCCCccccccCCCCCCccEEEecCccccc----Ccc---cEEEecHHHHHH
Q psy15447 235 PLKDILSLRSKYQARIFVDE-SVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG----SVG---GFCVGSSYIIEH 306 (457)
Q Consensus 235 ~l~~i~~l~~~~g~~li~DE-a~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg----~~g---G~v~~~~~~~~~ 306 (457)
+..++.+++++.|.++++-- -.+.-.+-+.| .|| +||.+||- .-|| ..| ||.+.++.+...
T Consensus 264 d~~el~~~a~~~~s~vv~atDLLaLtiLrpPg-----efG-----aDIavGSs-QRFGVPlGYGGPHAaFfAv~~~l~R~ 332 (1001)
T KOG2040|consen 264 DFDELVELAHANGSLVVMATDLLALTILRPPG-----EFG-----ADIAVGSS-QRFGVPLGYGGPHAAFFAVSESLVRM 332 (1001)
T ss_pred CHHHHHHHhhccCceEEEeehhhHHHccCChh-----hcC-----ceeeeccc-cccCccccCCCchHHHHHHHHHHHhh
Confidence 99999999999998766542 22222232211 344 37888764 3333 222 444444443332
Q ss_pred HHhh----------------------CCcceecCCCcHHHHHHHHHHHHHH---hhCc----HHHHHHHHHHHHHHHHhh
Q psy15447 307 HRLS----------------------GSGYCFSASLPPFLAVAANKALHLL---KANP----SLLTKLREKCNTMHSLLS 357 (457)
Q Consensus 307 ~~~~----------------------~~~~~~~~~~~~~~~aaa~a~l~~~---~~~~----~~~~~l~~~~~~l~~~L~ 357 (457)
+.-. .+--.--.+.|-..+.|.++.+.-+ =..+ ++..++......|...|+
T Consensus 333 mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~ 412 (1001)
T KOG2040|consen 333 MPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLK 412 (1001)
T ss_pred CCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 2000 0000001122333334444433222 1122 334455555667777777
Q ss_pred cccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHH
Q psy15447 358 QHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDM 437 (457)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi 437 (457)
. .|.++....-.-.+.+.++. ...++.++..+++|-++-.. .+.+-+++--+.+++|+
T Consensus 413 ~----aghel~~k~fFDTLkI~~~~---------s~~~~l~rA~~~~iNlr~~e---------d~tigvslDETv~~~Dv 470 (1001)
T KOG2040|consen 413 N----AGHELQHKPFFDTLKIRCGC---------SAEEVLDRAAKRQINLRLVE---------DGTIGVSLDETVTEKDV 470 (1001)
T ss_pred h----cchhhccccccceEEEEecC---------cHHHHHHHHHhhcCceEEee---------cCceEEeecccccHHHH
Confidence 6 56655432222334455554 24567778888887766433 57888999999999999
Q ss_pred HHHHHHHH
Q psy15447 438 NSLIETLC 445 (457)
Q Consensus 438 ~~~~~~l~ 445 (457)
|.++..+.
T Consensus 471 ddLl~vf~ 478 (1001)
T KOG2040|consen 471 DDLLWVFN 478 (1001)
T ss_pred HHHHHHHc
Confidence 99999885
No 392
>KOG3843|consensus
Probab=97.77 E-value=0.00083 Score=60.20 Aligned_cols=300 Identities=13% Similarity=0.181 Sum_probs=150.7
Q ss_pred HHHHHHHHhhcC---CCcEEEec--ccHHHHHHHHHhhcC---CCCEEEEeCcccHHHHHHHHhcCCeEEEecC------
Q psy15447 128 LDLENDIASFMG---LEETALYS--FGFSTSASAIAAYVK---RNDAVFVDENINFAIQTGLIASRCKVQYFKH------ 193 (457)
Q Consensus 128 ~~l~~~la~~~g---~~~~i~~~--sG~~a~~~ai~a~~~---~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------ 193 (457)
.++......+.| +..++++. +|.+- ...+..+.+ +-+.|+..+-..-+-++.+-..|.+.+.+..
T Consensus 60 ne~a~~~i~l~glhav~nc~vvpl~tgmsl-slc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~ 138 (432)
T KOG3843|consen 60 NEFAKDAIHLAGLHAVANCFVVPLATGMSL-SLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDE 138 (432)
T ss_pred HHHHHHHHHHhhhhhhhceeEEeccccccH-HHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchH
Confidence 344444444555 44566554 44432 233333432 2346666666666666666666766554432
Q ss_pred --CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC-----hHHHHHHHHHcCcEEEEEcCcccccccCCCC
Q psy15447 194 --NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP-----LKDILSLRSKYQARIFVDESVSFGTLGSTGH 266 (457)
Q Consensus 194 --~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~-----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~ 266 (457)
.|++.+++.+++..+ +-+.+|.. .+.+..| +++|..+|..|++.-|+..+|+.-.- +.-+
T Consensus 139 l~tdleav~~~iee~g~-------dcilci~s-----ttscfapr~pd~leaiaaica~~diphivnnayglqse-e~i~ 205 (432)
T KOG3843|consen 139 LITDLEAVEAIIEELGE-------DCILCIHS-----TTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSE-ECIH 205 (432)
T ss_pred HHHhHHHHHHHHHHhCC-------ceEEEEee-----cccccCCCCCchHHHHHHHHHccCchhhhccccccchH-HHHH
Confidence 268888888887652 22222222 2222322 89999999999999999999764210 0000
Q ss_pred ccccccCCCCCCccEEEecCccccc-CcccEEEe--cHHHHHHHHhhCCcceecCCCcHHHHH-----HHHHH-HHHHhh
Q psy15447 267 GVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVG--SSYIIEHHRLSGSGYCFSASLPPFLAV-----AANKA-LHLLKA 337 (457)
Q Consensus 267 ~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~a-----aa~a~-l~~~~~ 337 (457)
-... +..-.++|.++.|+-|.|- +.||+++. ++..+..+.+.-.+. -+.+ |..-.. .+..+ .+.+.+
T Consensus 206 ~iaa--~~~~grida~vqsldknf~vpvggaiia~fk~n~iq~iak~ypgr-asa~-ps~dllitll~~gqn~f~e~~~e 281 (432)
T KOG3843|consen 206 KIAA--AAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQEIAKMYPGR-ASAS-PSLDLLITLLSLGQNAFKELFGE 281 (432)
T ss_pred HHHH--HhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHHHHHHhCCCc-cccC-ccHHHHHHHHHhchhHHHHHHHH
Confidence 1111 1112356778889999995 45666533 444555443322221 1111 221111 11111 233334
Q ss_pred CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCee---EeccccCc
Q psy15447 338 NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFA---ITCPSHLD 414 (457)
Q Consensus 338 ~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~---v~~~~~~~ 414 (457)
..+++-+++.+...|.+.+.+ .-++.+..+.+.-..+..-++ ...+....+...|..+||- +.+.+...
T Consensus 282 qkemf~~l~~ki~~~ae~~~e----~l~~~p~n~is~amtl~ti~~----~k~kavt~~gsilfak~isgarvv~~~q~k 353 (432)
T KOG3843|consen 282 QKEMFLKLRNKIIKFAEAIGE----CLLETPENEISLAMTLKTIDE----AKDKAVTLFGSILFAKGISGARVVPLGQMK 353 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhhh----hhhcCCCchhhhhhhhccCCh----HHhhHHHHHHHHHHhccccCceEeeccccc
Confidence 444555555555555555444 111221111111111111111 1111233455667777653 33322111
Q ss_pred c-------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 415 Q-------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 415 ~-------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
. .......++-+.....+++.|+|.+++.|...++.++.
T Consensus 354 ttieg~ef~~f~sht~e~~~~yln~a~aigm~~hdld~~~~rl~~~~a~~~k 405 (432)
T KOG3843|consen 354 TTIEGCEFIGFGSHTNEQHCAYLNAACAIGMKDHDLDEFFNRLDRCLAAFRK 405 (432)
T ss_pred eeeeceEEeccccccCcCchhHhhHHHhcCCcHhHHHHHHHHHHHHHHHHHH
Confidence 0 00112346777777888999999999999888776643
No 393
>KOG1411|consensus
Probab=97.55 E-value=0.002 Score=60.16 Aligned_cols=259 Identities=11% Similarity=0.066 Sum_probs=135.3
Q ss_pred ccHHHHH--HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHH----HHHHHHHhhchhcccCCCCccEEE
Q psy15447 148 FGFSTSA--SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQ----HLEELLRQQDERDTLNSKVTKKFI 221 (457)
Q Consensus 148 sG~~a~~--~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~----~le~~l~~~~~~~~~~~~~~~~~v 221 (457)
||+.|+- +.+.+-.-++..|.++.+.++.........|..+..+++-|++ +++..++.... .| +. .+|
T Consensus 128 SGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~----~p-~g-s~i 201 (427)
T KOG1411|consen 128 SGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGE----AP-EG-SII 201 (427)
T ss_pred cCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhc----CC-CC-cEE
Confidence 5665533 3333334457889999999888777788888888777655433 23333333321 11 22 233
Q ss_pred EEe-cCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-----ccccCCCCCCccEEEecCcccccC
Q psy15447 222 IVE-GVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-----TEYFGVSTEEVDMIIGSLEHALGS 292 (457)
Q Consensus 222 i~e-~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-----~~~~~~~~~~~Di~~~s~sK~lg~ 292 (457)
++- --+||||.-+. .++|+++-++.+.+-++|-+|-....|.--+-. +...|. + -.+..|++|.+|.
T Consensus 202 lLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~---~-~~laQSyAKNMGL 277 (427)
T KOG1411|consen 202 LLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGH---E-ILLAQSYAKNMGL 277 (427)
T ss_pred EeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCC---c-eEeehhhhhhcch
Confidence 333 35578886554 678999999999999999987544444322111 011122 1 2567899999986
Q ss_pred cc---cE---EEecHHHHHHH----HhhCCcceecCCCcHHHHHHHHHH-H---HHHh----hCcHHHHHHHHHHHHHHH
Q psy15447 293 VG---GF---CVGSSYIIEHH----RLSGSGYCFSASLPPFLAVAANKA-L---HLLK----ANPSLLTKLREKCNTMHS 354 (457)
Q Consensus 293 ~g---G~---v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~aaa~a~-l---~~~~----~~~~~~~~l~~~~~~l~~ 354 (457)
-| |. ++.+.+....+ +...++ .|+. ||+--|...+. | ++.. +...+.+++...+..+.+
T Consensus 278 YgERvGa~svvc~~ad~A~rV~SQlk~liRp-mYSn--PP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d 354 (427)
T KOG1411|consen 278 YGERVGALSVVCKDADEAKRVESQLKILIRP-MYSN--PPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFD 354 (427)
T ss_pred hhhccceeEEEecCHHHHHHHHHHHHHHhcc-cccC--CCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhH
Confidence 44 32 34444433322 222222 4543 44332222222 1 1111 112344555556666666
Q ss_pred HhhcccccCCeEEecc---CCCCeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecC
Q psy15447 355 LLSQHKVTQRFLVQGH---RDTPLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNI 430 (457)
Q Consensus 355 ~L~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~ 430 (457)
.|.+ .|-..... .+-.++++.--.+ +-.+.|. +.-|+++.. -||+...
T Consensus 355 ~L~~----~gs~~~W~hI~~QIGMF~fTgl~p-----------eQv~~l~ke~~iYmT~d-------------GRiS~aG 406 (427)
T KOG1411|consen 355 ALEK----EGSPGNWSHITKQIGMFCFTGLNP-----------EQVDWLTKEYHIYLTKD-------------GRISMAG 406 (427)
T ss_pred Hhhc----CCCCccHHHHHHhhheeeecCCCH-----------HHHHHHHhhheeeeccC-------------ceEeecc
Confidence 6665 33221000 1122333321111 2334444 457877632 3666643
Q ss_pred CCCHHHHHHHHHHHHHHH
Q psy15447 431 SHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 431 ~~t~edi~~~~~~l~~~~ 448 (457)
.+...++++.++|..+-
T Consensus 407 -~ss~nV~yLa~aih~vt 423 (427)
T KOG1411|consen 407 -LSSSNVPYLADAIHAVT 423 (427)
T ss_pred -ccccCCcccchhhHhHh
Confidence 56777888888877654
No 394
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=95.31 E-value=0.043 Score=46.46 Aligned_cols=55 Identities=15% Similarity=0.085 Sum_probs=43.2
Q ss_pred ccChHHHHHHHHHHHhhcC--C----CcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccH
Q psy15447 121 YGTNVVHLDLENDIASFMG--L----EETALYSFGFSTSASAIAAYVKRNDAVFVDENINF 175 (457)
Q Consensus 121 ~g~~~~~~~l~~~la~~~g--~----~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~ 175 (457)
.|..++++.+++.+.+..| . +++++++++++|+..++.+++++||.|++..++|.
T Consensus 92 ~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 92 HGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 4567777888888877666 2 34566666678999999999999999999999875
No 395
>KOG2790|consensus
Probab=95.28 E-value=2.4 Score=39.12 Aligned_cols=319 Identities=13% Similarity=0.086 Sum_probs=160.0
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCC----CCCCcccChHHHHHHHHHHHhhcCCC---cEEEecccHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSC----GPRGFYGTNVVHLDLENDIASFMGLE---ETALYSFGFST 152 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~----~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a 152 (457)
++++||+.+-. -+ +++-+.++-.+.+.-.|.+-+ ..|.-. -...+.+.+..+.+++..+ +++|..+|...
T Consensus 6 ~~vvnFaaGPA-kl-p~~VL~e~qkdl~n~~g~GisV~EmSHRsk~-f~kii~~tes~lreLlniPdn~~vlf~QGGGt~ 82 (370)
T KOG2790|consen 6 ERVVNFAAGPA-KL-PESVLLEAQKDLLNFNGSGISVMEMSHRSKD-FAKIINDTESLLRELLNIPDNYKVLFLQGGGTG 82 (370)
T ss_pred cceeecCCCcc-cC-CHHHHHHHHHHhhccCCCcceEEEecccchh-HHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcc
Confidence 57888876311 22 345555665555543332211 111111 1345566677777777755 35666554443
Q ss_pred HHHHHHh-hc--CCC---CEEEEeCcccHHHHHHHHhcCCeEEEec--------CCCHHHHHHHHHhhchhcccCCCCcc
Q psy15447 153 SASAIAA-YV--KRN---DAVFVDENINFAIQTGLIASRCKVQYFK--------HNNMQHLEELLRQQDERDTLNSKVTK 218 (457)
Q Consensus 153 ~~~ai~a-~~--~~g---d~v~~~~~~h~~~~~~~~~~g~~~~~~~--------~~d~~~le~~l~~~~~~~~~~~~~~~ 218 (457)
-.+|++. ++ +.| |.|+.-.-.--+.-.+-+......+..+ -+|++.++.-. +..
T Consensus 83 qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~~~------------da~ 150 (370)
T KOG2790|consen 83 QFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWELNP------------DAS 150 (370)
T ss_pred cccccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhcccCC------------Ccc
Confidence 3333322 22 334 3444322222223333333333222221 23555554321 112
Q ss_pred EEEEE--ecCCCCCCCCC-ChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-
Q psy15447 219 KFIIV--EGVYMNSADIC-PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG- 294 (457)
Q Consensus 219 ~~vi~--e~v~~~~G~i~-~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g- 294 (457)
-+.++ |+++ |.-- +++ +-.-+|..++.|-+.-| +.+ ..++ .+.+++.....|.+|+.|
T Consensus 151 yvyyCaNETVH---GVEf~~~P----~~~~~~~vlVaDmSSnf--lSr-------pvDv--sk~gvi~aGAQKN~G~aG~ 212 (370)
T KOG2790|consen 151 YVYYCANETVH---GVEFDFIP----VNDPKGAVLVADMSSNF--LSR-------PVDV--SKFGVIFAGAQKNVGPAGV 212 (370)
T ss_pred EEEEecCceee---ceecCCCC----CCCCCCceEEEecccch--hcC-------Cccc--hhcceEEeccccccCcccc
Confidence 23333 3343 3221 122 22346889999976443 221 2333 234566778899998766
Q ss_pred cEEEecHHHHHHHHhhCC-----------cceecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhccc
Q psy15447 295 GFCVGSSYIIEHHRLSGS-----------GYCFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHK 360 (457)
Q Consensus 295 G~v~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~ 360 (457)
-.++.+++++........ ...|. ++|.....+.--.++.+.+. ..+.+...++.+.+.+.+.+
T Consensus 213 Tvvivr~dllg~~~~~tP~v~dyk~~~~NnSlyN-TpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~-- 289 (370)
T KOG2790|consen 213 TVVIVRKDLLGNALDITPSVLDYKIMDKNNSLYN-TPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDN-- 289 (370)
T ss_pred EEEEEehhhhcccccCCccccceeeecccccccc-CCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh--
Confidence 234556666544321110 01111 22333333333456665544 23344555778889999987
Q ss_pred ccCCeEEe-ccC--C-CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHH
Q psy15447 361 VTQRFLVQ-GHR--D-TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQD 436 (457)
Q Consensus 361 ~~~~~~~~-~~~--~-~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ed 436 (457)
..|+-.. .++ . -..++++++++. .-.++.++..+++..-..+ + ..-+.+|-++-..+|-++
T Consensus 290 -s~gfy~cpVe~~~RS~MNV~Fri~~d~-------Le~eFLkeA~~~~mv~LKG-h------RSVGGiRASlYNAisv~~ 354 (370)
T KOG2790|consen 290 -SNGFYRCPVEPSVRSRMNVPFRIEKDE-------LEAEFLKEAAKEHMVQLKG-H------RSVGGIRASLYNAISVEE 354 (370)
T ss_pred -cCCeEEcccchhhhhhcccceeecchH-------HHHHHHHHHHHhhhhcccc-c------cccccchhhhhccccHHH
Confidence 3454332 111 1 234566777553 4445666666666432222 2 123679999999999999
Q ss_pred HHHHHHHHHHHHH
Q psy15447 437 MNSLIETLCKSHD 449 (457)
Q Consensus 437 i~~~~~~l~~~~~ 449 (457)
++++++-++++.+
T Consensus 355 ~q~L~~~m~~F~k 367 (370)
T KOG2790|consen 355 VQKLAAFMKEFQK 367 (370)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988765
No 396
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=78.84 E-value=36 Score=33.09 Aligned_cols=89 Identities=19% Similarity=0.137 Sum_probs=54.6
Q ss_pred CEEEEeCc--ccHHHHHHHHhcCCeEEEec-C-CCHHHHHHHHHhhchhcccCCCCccEEEEEecC---C--CCCCCCCC
Q psy15447 165 DAVFVDEN--INFAIQTGLIASRCKVQYFK-H-NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV---Y--MNSADICP 235 (457)
Q Consensus 165 d~v~~~~~--~h~~~~~~~~~~g~~~~~~~-~-~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v---~--~~~G~i~~ 235 (457)
|.+-+... .+...+..+.-.+.++..-. . .+++++..+++..... .+..++++|-- + +-+-...+
T Consensus 186 d~lqIga~~~~n~~LL~~va~t~kPVllk~G~~~t~ee~~~A~e~i~~~------Gn~~viL~erG~rtf~s~y~~~~~d 259 (352)
T PRK13396 186 DVIQVGARNMQNFSLLKKVGAQDKPVLLKRGMAATIDEWLMAAEYILAA------GNPNVILCERGIRTFDRQYTRNTLD 259 (352)
T ss_pred CeEEECcccccCHHHHHHHHccCCeEEEeCCCCCCHHHHHHHHHHHHHc------CCCeEEEEecCCccCcCCCCCCCcC
Confidence 55544333 35556666555554443222 2 2677777766665431 34457777751 1 11224567
Q ss_pred hHHHHHHHHHcCcEEEEEcCcccc
Q psy15447 236 LKDILSLRSKYQARIFVDESVSFG 259 (457)
Q Consensus 236 l~~i~~l~~~~g~~li~DEa~~~g 259 (457)
|..|..+.+.+++.+|+|-+|+.|
T Consensus 260 l~ai~~lk~~~~lPVi~DpsH~~G 283 (352)
T PRK13396 260 LSVIPVLRSLTHLPIMIDPSHGTG 283 (352)
T ss_pred HHHHHHHHHhhCCCEEECCcccCC
Confidence 899999988889999999999864
No 397
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=73.08 E-value=78 Score=29.18 Aligned_cols=60 Identities=20% Similarity=0.250 Sum_probs=40.0
Q ss_pred CCHHHHHHHHHhhchhcccCCCCccEEEEEe-cCCC---CCCCCCChHHHHHHHHHcCcEEEEEcCcccc
Q psy15447 194 NNMQHLEELLRQQDERDTLNSKVTKKFIIVE-GVYM---NSADICPLKDILSLRSKYQARIFVDESVSFG 259 (457)
Q Consensus 194 ~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e-~v~~---~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g 259 (457)
.++++++.+++..... .+..+++++ .+.+ +.-...++..|..+.+++++.+|+|-.|+.|
T Consensus 133 ~t~~e~~~A~e~i~~~------Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G 196 (250)
T PRK13397 133 ATIEEYLGALSYLQDT------GKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTG 196 (250)
T ss_pred CCHHHHHHHHHHHHHc------CCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCc
Confidence 4667776666554421 344678887 4332 1122566888888888899999999998855
No 398
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=72.74 E-value=61 Score=31.76 Aligned_cols=81 Identities=14% Similarity=0.150 Sum_probs=52.8
Q ss_pred ccHHHHHHHHhcCCeEEEecC--CCHHHHHHHHHhhchhcccCCCCccEEEEEe-cCCC-C--CCCCCChHHHHHHHHHc
Q psy15447 173 INFAIQTGLIASRCKVQYFKH--NNMQHLEELLRQQDERDTLNSKVTKKFIIVE-GVYM-N--SADICPLKDILSLRSKY 246 (457)
Q Consensus 173 ~h~~~~~~~~~~g~~~~~~~~--~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e-~v~~-~--~G~i~~l~~i~~l~~~~ 246 (457)
.+...+..+.-.|.++..-.. .++++++.+++..... ++..+++++ .+.+ | +-...+|..|..+.+++
T Consensus 213 ~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~------Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~ 286 (360)
T PRK12595 213 QNFELLKAAGRVNKPVLLKRGLSATIEEFIYAAEYIMSQ------GNGQIILCERGIRTYEKATRNTLDISAVPILKQET 286 (360)
T ss_pred cCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHHHHHC------CCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHh
Confidence 455666666666655544333 4788888777665431 334577777 4332 1 12234789999999999
Q ss_pred CcEEEEEcCcccc
Q psy15447 247 QARIFVDESVSFG 259 (457)
Q Consensus 247 g~~li~DEa~~~g 259 (457)
++.+++|-.|+.|
T Consensus 287 ~~PV~~d~~Hs~G 299 (360)
T PRK12595 287 HLPVMVDVTHSTG 299 (360)
T ss_pred CCCEEEeCCCCCc
Confidence 9999999988754
No 399
>smart00642 Aamy Alpha-amylase domain.
Probab=69.18 E-value=11 Score=32.45 Aligned_cols=22 Identities=9% Similarity=0.301 Sum_probs=19.3
Q ss_pred ChHHHHHHHHHcCcEEEEEcCc
Q psy15447 235 PLKDILSLRSKYQARIFVDESV 256 (457)
Q Consensus 235 ~l~~i~~l~~~~g~~li~DEa~ 256 (457)
.++++++-|+++|+.+|+|=+.
T Consensus 71 d~~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 71 DFKELVDAAHARGIKVILDVVI 92 (166)
T ss_pred HHHHHHHHHHHCCCEEEEEECC
Confidence 3789999999999999999873
No 400
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=66.75 E-value=1e+02 Score=28.58 Aligned_cols=89 Identities=15% Similarity=0.127 Sum_probs=54.7
Q ss_pred CEEEEeCc--ccHHHHHHHHhcCCeEEEecC-C-CHHHHHHHHHhhchhcccCCCCccEEEEEec-CCC--C-CCCCCCh
Q psy15447 165 DAVFVDEN--INFAIQTGLIASRCKVQYFKH-N-NMQHLEELLRQQDERDTLNSKVTKKFIIVEG-VYM--N-SADICPL 236 (457)
Q Consensus 165 d~v~~~~~--~h~~~~~~~~~~g~~~~~~~~-~-d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~-v~~--~-~G~i~~l 236 (457)
|.+-+... .+...+..+.-.|.++..-.. . ++++++.+++..... ....+++++- +.+ + .-...++
T Consensus 110 d~lkI~s~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~------Gn~~i~l~~rG~s~y~~~~~~~~dl 183 (260)
T TIGR01361 110 DILQIGARNMQNFELLKEVGKQGKPVLLKRGMGNTIEEWLYAAEYILSS------GNGNVILCERGIRTFEKATRNTLDL 183 (260)
T ss_pred CEEEECcccccCHHHHHHHhcCCCcEEEeCCCCCCHHHHHHHHHHHHHc------CCCcEEEEECCCCCCCCCCcCCcCH
Confidence 55444333 355566666555655443222 2 688887777665431 2334666664 321 2 1234668
Q ss_pred HHHHHHHHHcCcEEEEEcCcccc
Q psy15447 237 KDILSLRSKYQARIFVDESVSFG 259 (457)
Q Consensus 237 ~~i~~l~~~~g~~li~DEa~~~g 259 (457)
..|..+.+++++.+++|-.|+.|
T Consensus 184 ~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 184 SAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred HHHHHHHHhhCCCEEEcCCCCCC
Confidence 99999999899999999998855
No 401
>TIGR01732 tiny_TM_bacill conserved hypothetical tiny transmembrane protein. This model represents a family of hypothetical proteins, half of which are 40 residues or less in length. Members are found only in spore-forming species. A Gly-rich variable region is followed by a strongly conserved, highly hydrophobic region, predicted to form a transmembrane helix, ending with an invariant Gly. The consensus for this stretch is FALLVVFILLIIV.
Probab=62.31 E-value=6.8 Score=21.81 Aligned_cols=12 Identities=50% Similarity=0.841 Sum_probs=9.4
Q ss_pred hhHHHHHHHHHH
Q psy15447 14 GLFLPLTLFIVL 25 (457)
Q Consensus 14 ~~~~~~~~~~~~ 25 (457)
|.-++++|||+|
T Consensus 7 gf~livVLFILL 18 (26)
T TIGR01732 7 GFALIVVLFILL 18 (26)
T ss_pred chHHHHHHHHHH
Confidence 566788888887
No 402
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322
Probab=57.84 E-value=13 Score=24.46 Aligned_cols=27 Identities=19% Similarity=0.282 Sum_probs=19.7
Q ss_pred chhhhhhhHHHHHHHHHH-hhccccCCC
Q psy15447 8 DFYTSVGLFLPLTLFIVL-SLSLSKHKK 34 (457)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 34 (457)
.|.|+.||+++.++|+.. -+.|+++++
T Consensus 9 ~~a~~~~l~~~~~~Figiv~wa~~p~~k 36 (48)
T cd01324 9 GLADSWGLLYLALFFLGVVVWAFRPGRK 36 (48)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 578999998887777655 666776554
No 403
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=57.03 E-value=96 Score=27.82 Aligned_cols=76 Identities=13% Similarity=0.072 Sum_probs=45.8
Q ss_pred CEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHH
Q psy15447 165 DAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS 244 (457)
Q Consensus 165 d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~ 244 (457)
.+....+.........++-.|..++..+.+|.+.|.++++... +++++.+..+ .....-...+.+.|+
T Consensus 24 ~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d-----------~v~~~~~~~~-~~~~~~~~~li~Aa~ 91 (233)
T PF05368_consen 24 SVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVD-----------AVFSVTPPSH-PSELEQQKNLIDAAK 91 (233)
T ss_dssp CEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCS-----------EEEEESSCSC-CCHHHHHHHHHHHHH
T ss_pred CcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCc-----------eEEeecCcch-hhhhhhhhhHHHhhh
Confidence 4444455554445556677799999999999999999997532 3444433332 111222468889999
Q ss_pred HcCcEEEE
Q psy15447 245 KYQARIFV 252 (457)
Q Consensus 245 ~~g~~li~ 252 (457)
+.|+-.++
T Consensus 92 ~agVk~~v 99 (233)
T PF05368_consen 92 AAGVKHFV 99 (233)
T ss_dssp HHT-SEEE
T ss_pred ccccceEE
Confidence 98865443
No 404
>PF09680 Tiny_TM_bacill: Protein of unknown function (Tiny_TM_bacill); InterPro: IPR010070 This entry represents a family of hypothetical proteins, half of which are 40 residues or less in length. Members are found only in spore-forming species. A Gly-rich variable region is followed by a strongly conserved, highly hydrophobic region, predicted to form a transmembrane helix, ending with an invariant Gly. The consensus for this stretch is FALLVVFILLIIV.
Probab=56.65 E-value=8.7 Score=20.91 Aligned_cols=12 Identities=50% Similarity=0.841 Sum_probs=9.1
Q ss_pred hhHHHHHHHHHH
Q psy15447 14 GLFLPLTLFIVL 25 (457)
Q Consensus 14 ~~~~~~~~~~~~ 25 (457)
|.-|+++|||+|
T Consensus 5 ~FalivVLFILL 16 (24)
T PF09680_consen 5 GFALIVVLFILL 16 (24)
T ss_pred cchhHHHHHHHH
Confidence 556778888887
No 405
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=54.23 E-value=18 Score=31.82 Aligned_cols=36 Identities=8% Similarity=0.119 Sum_probs=29.0
Q ss_pred CccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEE
Q psy15447 216 VTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFV 252 (457)
Q Consensus 216 ~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~ 252 (457)
-..+.|++|= .+..|.+...+++.+++++||+.+|.
T Consensus 155 l~Pa~VicEi-~~~dG~mar~~~~~~fa~~h~l~~it 190 (203)
T COG0108 155 LKPAGVICEI-MNDDGTMARLPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCCcEEEEEE-eCCCccccChHHHHHHHHHcCCcEEE
Confidence 3446777774 44689999999999999999988764
No 406
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=48.84 E-value=2.6e+02 Score=27.97 Aligned_cols=84 Identities=11% Similarity=0.229 Sum_probs=52.0
Q ss_pred hhcCCCCEEEEeCcc--cHHHHHHHHhc--CCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC---C-
Q psy15447 159 AYVKRNDAVFVDENI--NFAIQTGLIAS--RCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN---S- 230 (457)
Q Consensus 159 a~~~~gd~v~~~~~~--h~~~~~~~~~~--g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~---~- 230 (457)
.+.++++.+.+..-. +..-..+-++. ..++..+...+++++.+.+++. +..++|+++++.. .
T Consensus 116 ~lA~~~~vLYVsGEES~~QiklRA~RL~~~~~~l~l~aEt~~e~I~~~l~~~----------~p~lvVIDSIQT~~s~~~ 185 (456)
T COG1066 116 RLAKRGKVLYVSGEESLQQIKLRADRLGLPTNNLYLLAETNLEDIIAELEQE----------KPDLVVIDSIQTLYSEEI 185 (456)
T ss_pred HHHhcCcEEEEeCCcCHHHHHHHHHHhCCCccceEEehhcCHHHHHHHHHhc----------CCCEEEEeccceeecccc
Confidence 344556555444333 33334444443 3566777788999998888763 4568888887743 2
Q ss_pred ----CCCCC----hHHHHHHHHHcCcEEEE
Q psy15447 231 ----ADICP----LKDILSLRSKYQARIFV 252 (457)
Q Consensus 231 ----G~i~~----l~~i~~l~~~~g~~li~ 252 (457)
|.+.- -.+|.++|+++|+.+++
T Consensus 186 ~SapGsVsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 186 TSAPGSVSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred cCCCCcHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 32222 34888899999986554
No 407
>PRK03892 ribonuclease P protein component 3; Provisional
Probab=47.00 E-value=2.1e+02 Score=25.55 Aligned_cols=108 Identities=9% Similarity=0.023 Sum_probs=51.8
Q ss_pred HHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhch
Q psy15447 134 IASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDE 208 (457)
Q Consensus 134 la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~ 208 (457)
+.+-+|.+.+-+.+.-..-+...++-+ +.+.|.+..+.-.-...++.. +..+..-|+. +++++-..+...
T Consensus 54 l~~~yg~~gv~i~~~np~~l~~~V~k~--~~~vv~V~GGd~~vNR~AvE~-~VDVL~~P~~~Rkd~g~dHVLAKlAa~-- 128 (216)
T PRK03892 54 LKKEYGKVAILLVTPKPSLIREVKQRF--LNYLIYVQGGDLRVNRYAIER-GVDAIISPWVGRKDPGIDHVLARMAAK-- 128 (216)
T ss_pred HHHhcCcceEEEecCCHHHHHHHHHhc--cceEEEEECCcHHHHHHHHhc-ccceeecccccCcCCCccHHHHHHHHH--
Confidence 333444443333333333334444444 355555554443333333332 4444433322 355555544432
Q ss_pred hcccCCCCccEE-EEEecCCCCCC-CC----CChHHHHHHHHHcCcEEEEE
Q psy15447 209 RDTLNSKVTKKF-IIVEGVYMNSA-DI----CPLKDILSLRSKYQARIFVD 253 (457)
Q Consensus 209 ~~~~~~~~~~~~-vi~e~v~~~~G-~i----~~l~~i~~l~~~~g~~li~D 253 (457)
..+++ +-+.|+....| .. ..+.++.+|+++|++.+++=
T Consensus 129 -------n~VAIe~~L~plL~~~G~~Rar~L~~~r~~l~L~rKYd~P~VIS 172 (216)
T PRK03892 129 -------RGVAIGFSLSPLLRANPYERANILRFMMKAWQLVNKYKVPRFIT 172 (216)
T ss_pred -------cCeEEEEecHHHHhhCchhHHHHHHHHHHHHHHHHHcCCCEEEe
Confidence 23343 33444443333 22 23679999999999987764
No 408
>PF06153 DUF970: Protein of unknown function (DUF970); InterPro: IPR010375 This is a family of uncharacterised bacterial proteins.; PDB: 3M05_A.
Probab=41.00 E-value=27 Score=27.55 Aligned_cols=53 Identities=13% Similarity=0.250 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHcCeeEecc----ccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 392 LLQTICDMCIQAGFAITCP----SHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 392 ~~~~~~~~l~~~Gi~v~~~----~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
++..+.++|.++|+.+... ++. ..+...+-+.+ .+++++++++.|++..+...
T Consensus 12 Da~~l~~~L~~~g~~~TkLsstGGFL----r~GNtTlliGv----ede~v~~vl~iIk~~c~~R~ 68 (109)
T PF06153_consen 12 DADDLSDALNENGFRVTKLSSTGGFL----REGNTTLLIGV----EDEKVDEVLEIIKENCKKRE 68 (109)
T ss_dssp HHHHHHHHHHHTT--EEEEEEEETTT----TEEEEEEEEEE----EGGGHHHHHHHHHHHH--EE
T ss_pred hHHHHHHHHHHCCceEEEEeccccee----ccCCEEEEEEe----cHHHHHHHHHHHHHhhcCce
Confidence 6788999999999988643 221 11122344444 78999999999998876544
No 409
>KOG0630|consensus
Probab=38.95 E-value=1.5e+02 Score=30.02 Aligned_cols=54 Identities=9% Similarity=0.073 Sum_probs=34.9
Q ss_pred CHHHHHHHHHhhchhcccCCCCccEEEEEec-CCCCCCCCCChHHHHHHHHHcC-cEEEEEc
Q psy15447 195 NMQHLEELLRQQDERDTLNSKVTKKFIIVEG-VYMNSADICPLKDILSLRSKYQ-ARIFVDE 254 (457)
Q Consensus 195 d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~-v~~~~G~i~~l~~i~~l~~~~g-~~li~DE 254 (457)
|...+++.|++.-.. .++-++++-- ..+-.|...-+-+|+++|++|. .||+.-.
T Consensus 275 Dhh~feKiideDlaa------gkkPLilia~iGasi~GqnDmi~kildi~eahakfWLHasG 330 (838)
T KOG0630|consen 275 DHHLFEKIIDEDLAA------GKKPLILIADIGASICGQNDMILKILDICEAHAKFWLHASG 330 (838)
T ss_pred cHHHHHHHHHHHHhC------CCCCeEEEEeccchhhcchHHHHHHHHHHHHhhheeEeecc
Confidence 566788888764321 2333444332 2334577777999999999986 8887754
No 410
>PLN02672 methionine S-methyltransferase
Probab=38.94 E-value=4.3e+02 Score=30.17 Aligned_cols=115 Identities=17% Similarity=0.218 Sum_probs=61.5
Q ss_pred HHHHHHHHhhc----C----CCcEEEecccHHHHHHHHHhhcCCCCEEEEe----CcccHHHHHHHHhcC----------
Q psy15447 128 LDLENDIASFM----G----LEETALYSFGFSTSASAIAAYVKRNDAVFVD----ENINFAIQTGLIASR---------- 185 (457)
Q Consensus 128 ~~l~~~la~~~----g----~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~----~~~h~~~~~~~~~~g---------- 185 (457)
..++..+|.|+ + .+.++++.+-..|++.+++.+.-+= -++| +.-+.....++...+
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (1082)
T PLN02672 429 KRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRL--AIVDEHLTRWLPKKWLTSLAIENATSDSKSDDV 506 (1082)
T ss_pred hHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHH--HhhhhhhhccCCHHHHhHhhhhcccccCccCCe
Confidence 34455555544 3 3577899999999999887653211 1111 111222222222222
Q ss_pred CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcC
Q psy15447 186 CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDES 255 (457)
Q Consensus 186 ~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa 255 (457)
.++..-|+. .+.+.+++++.+ ..+|++.--....-+...++.|.+.+++-|++|++|+.
T Consensus 507 ~~~~~~~~~-~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1082)
T PLN02672 507 ITVIEAPRQ-SDLVIELIKKLK----------PQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDIS 565 (1082)
T ss_pred EEEEeCCCc-chHHHHHHHhCC----------CeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehh
Confidence 223333332 234556666543 34555532221111223478999999999999999986
No 411
>PRK13718 conjugal transfer protein TrbE; Provisional
Probab=38.20 E-value=26 Score=25.40 Aligned_cols=31 Identities=19% Similarity=0.315 Sum_probs=21.1
Q ss_pred hhhhhhhHHHHHHHHHHhhccccCCCChhhH
Q psy15447 9 FYTSVGLFLPLTLFIVLSLSLSKHKKHTINV 39 (457)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 (457)
+|..+-+|++..+|-+|+.++...+.+++|+
T Consensus 51 ~~~gv~~~~ly~ffs~Ltkl~~~d~~ks~~~ 81 (84)
T PRK13718 51 LYSGVLLFILYFFFSALTKLQKHDERKSDER 81 (84)
T ss_pred HHHhHHHHHHHHHHHHHHHHHhcccccchhh
Confidence 3455667777788888888776666555544
No 412
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=38.16 E-value=3.7e+02 Score=25.72 Aligned_cols=116 Identities=16% Similarity=0.123 Sum_probs=61.5
Q ss_pred HHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCC--CEEEEeCc--ccHH--HHHHHHhcCCeEEEecCCCHHHHHHHH
Q psy15447 130 LENDIASFMGLEETALYSFGFSTSASAIAAYVKRN--DAVFVDEN--INFA--IQTGLIASRCKVQYFKHNNMQHLEELL 203 (457)
Q Consensus 130 l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~g--d~v~~~~~--~h~~--~~~~~~~~g~~~~~~~~~d~~~le~~l 203 (457)
+.+.-++++.....+++.+.+..+...+....+.| -.|++.+. .... +...+.-.|.++..++-+ .+-..+
T Consensus 110 I~~~a~~~i~~g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G~~~a~~L~~~GI~vtlI~Ds---av~~~m 186 (310)
T PRK08535 110 IGEIGAKRIRDGDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQGHITAKELAEYGIPVTLIVDS---AVRYFM 186 (310)
T ss_pred HHHHHHHHcCCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhHHHHHHHHHHCCCCEEEEehh---HHHHHH
Confidence 33344445544556666665666666665544333 34454333 2222 334455567777766543 333344
Q ss_pred HhhchhcccCCCCccEEEEEecCCCCCCCCCCh--HHHHHHHHHcCcEEEEE-cCccc
Q psy15447 204 RQQDERDTLNSKVTKKFIIVEGVYMNSADICPL--KDILSLRSKYQARIFVD-ESVSF 258 (457)
Q Consensus 204 ~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l--~~i~~l~~~~g~~li~D-Ea~~~ 258 (457)
.+.+ ..++=.+.+..++|.+... -.++-+|+.|++.+++= +.+.+
T Consensus 187 ~~vd----------~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V~a~~~K~ 234 (310)
T PRK08535 187 KDVD----------KVVVGADAITANGAVINKIGTSQIALAAHEARVPFMVAAETYKF 234 (310)
T ss_pred HhCC----------EEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEEeccccee
Confidence 4322 2233366677665555543 47777889999877653 34443
No 413
>COG1911 RPL30 Ribosomal protein L30E [Translation, ribosomal structure and biogenesis]
Probab=37.28 E-value=67 Score=24.57 Aligned_cols=87 Identities=14% Similarity=0.102 Sum_probs=52.7
Q ss_pred HHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCC
Q psy15447 153 SASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD 232 (457)
Q Consensus 153 ~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~ 232 (457)
+...++...+.|+.|+-. -.+.+.++...++.+.+-.|.|.++++.|+....- ..+.++.-+ |.
T Consensus 7 v~~~L~~avkTGkvilG~----k~tiK~lk~gkaKliiiAsN~P~~~k~~ieyYAkL------s~ipV~~y~------Gt 70 (100)
T COG1911 7 VEKELKLAVKTGKVILGS----KRTIKSLKLGKAKLIIIASNCPKELKEDIEYYAKL------SDIPVYVYE------GT 70 (100)
T ss_pred HHHHHHHHHhcCCEEEeh----HHHHHHHHcCCCcEEEEecCCCHHHHHHHHHHHHH------cCCcEEEec------CC
Confidence 344566666788877643 46778888888888888888888888888765310 122233333 33
Q ss_pred CCChHHHHHHHHHcCcEEEEEcC
Q psy15447 233 ICPLKDILSLRSKYQARIFVDES 255 (457)
Q Consensus 233 i~~l~~i~~l~~~~g~~li~DEa 255 (457)
-.+|-.+..--..-+++.|.|+-
T Consensus 71 ~~eLG~~cgkpf~v~~laIiD~G 93 (100)
T COG1911 71 SVELGTVCGKPFRVAALAIIDEG 93 (100)
T ss_pred ceeHHhhhCCCceEEEEEEecCc
Confidence 33333322222334778888874
No 414
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=35.73 E-value=3.9e+02 Score=25.38 Aligned_cols=116 Identities=12% Similarity=0.112 Sum_probs=61.7
Q ss_pred HHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCC--EEEEeCc--ccHH--HHHHHHhcCCeEEEecCCCHHHHHHHH
Q psy15447 130 LENDIASFMGLEETALYSFGFSTSASAIAAYVKRND--AVFVDEN--INFA--IQTGLIASRCKVQYFKHNNMQHLEELL 203 (457)
Q Consensus 130 l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd--~v~~~~~--~h~~--~~~~~~~~g~~~~~~~~~d~~~le~~l 203 (457)
+.+.-+++......+++.+.+..+...+....+.|. .|++.+. .... +...+.-.|.++..++-+ .+-..+
T Consensus 105 I~~~a~~~i~~g~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G~~~a~~L~~~gI~vtlI~Ds---a~~~~m 181 (301)
T TIGR00511 105 IGEIGAKRIRDGDVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQGHITAKELRDYGIPVTLIVDS---AVRYFM 181 (301)
T ss_pred HHHHHHHHcCCCCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchHHHHHHHHHHCCCCEEEEehh---HHHHHH
Confidence 333344444445566666656565556554433332 4444332 2222 334455567777666433 333445
Q ss_pred HhhchhcccCCCCccEEEEEecCCCCCCCCCCh--HHHHHHHHHcCcEEEEE-cCccc
Q psy15447 204 RQQDERDTLNSKVTKKFIIVEGVYMNSADICPL--KDILSLRSKYQARIFVD-ESVSF 258 (457)
Q Consensus 204 ~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l--~~i~~l~~~~g~~li~D-Ea~~~ 258 (457)
.+.+ ..++=.+.+..++|.+... -.++-+|+.|++.+++= |.+-+
T Consensus 182 ~~vd----------~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V~a~~~K~ 229 (301)
T TIGR00511 182 KEVD----------HVVVGADAITANGALINKIGTSQLALAAREARVPFMVAAETYKF 229 (301)
T ss_pred HhCC----------EEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEEEccccee
Confidence 4422 2333366777666666553 47778889999877653 44443
No 415
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=35.16 E-value=40 Score=35.48 Aligned_cols=36 Identities=8% Similarity=0.089 Sum_probs=27.5
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcc
Q psy15447 231 ADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGV 268 (457)
Q Consensus 231 G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~ 268 (457)
|....++++++-|+++||-+|+|=|++. +++.+.++
T Consensus 211 GtPedfk~fVD~aH~~GIgViLD~V~~H--F~~d~~~L 246 (628)
T COG0296 211 GTPEDFKALVDAAHQAGIGVILDWVPNH--FPPDGNYL 246 (628)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEecCCc--CCCCcchh
Confidence 4445599999999999999999999864 44444443
No 416
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=35.13 E-value=1.5e+02 Score=26.07 Aligned_cols=52 Identities=15% Similarity=0.138 Sum_probs=33.0
Q ss_pred HHHHHHHHhhc-hhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEE
Q psy15447 197 QHLEELLRQQD-ERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFV 252 (457)
Q Consensus 197 ~~le~~l~~~~-~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~ 252 (457)
+++...++... . .+.+.+.+|++.--.++.|.+.|.+.-.++++++|+.++.
T Consensus 95 dAi~~av~rl~~~----~~a~~kvvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iyt 147 (191)
T cd01455 95 EATEFAIKELAAK----EDFDEAIVIVLSDANLERYGIQPKKLADALAREPNVNAFV 147 (191)
T ss_pred HHHHHHHHHHHhc----CcCCCcEEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEE
Confidence 56655555432 1 1123445555555565678888988778999999987653
No 417
>COG3870 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.48 E-value=2.2e+02 Score=22.01 Aligned_cols=52 Identities=13% Similarity=0.114 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHcCeeEec----cccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 392 LLQTICDMCIQAGFAITC----PSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 392 ~~~~~~~~l~~~Gi~v~~----~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
++.++.+.|.++|+-+.. +++. ..+.-.+.|. ..+++++.+.+.|++..+..
T Consensus 12 da~~l~~~L~d~~fraTkLAsTGGFl----kaGNTTfliG----ved~~vd~~~s~Ike~C~~r 67 (109)
T COG3870 12 DANELEDALTDKNFRATKLASTGGFL----KAGNTTFLIG----VEDDRVDALRSLIKENCKSR 67 (109)
T ss_pred cHHHHHHHHHhCCceeEEeeccCcee----ecCCeEEEEe----cccchhHHHHHHHHHHhhhH
Confidence 567899999999987653 2221 0111233333 37889999999999877644
No 418
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=34.37 E-value=28 Score=32.94 Aligned_cols=25 Identities=16% Similarity=0.258 Sum_probs=20.7
Q ss_pred ChHHHHHHH-HHcCcEEEEEcCcccc
Q psy15447 235 PLKDILSLR-SKYQARIFVDESVSFG 259 (457)
Q Consensus 235 ~l~~i~~l~-~~~g~~li~DEa~~~g 259 (457)
-+++|.++| +.++.++|+||+|...
T Consensus 160 Rl~ql~~W~g~dfdgvivfDEcH~ak 185 (303)
T PF13872_consen 160 RLDQLVDWCGEDFDGVIVFDECHKAK 185 (303)
T ss_pred hHHHHHHHHhcCCCceEEeccchhcC
Confidence 388999999 5578899999998643
No 419
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=34.07 E-value=3e+02 Score=23.57 Aligned_cols=105 Identities=12% Similarity=0.065 Sum_probs=56.4
Q ss_pred HHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEE--eCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhch
Q psy15447 131 ENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFV--DENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDE 208 (457)
Q Consensus 131 ~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~--~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~ 208 (457)
++.|.+.++.+-+-+-.|++.-+.+..+ +.+.+..|.+ ..........-..+.|.++..++..+.++++..+++...
T Consensus 45 a~~lr~~~~iPVV~I~~s~~Dil~al~~-a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~~~~ 123 (176)
T PF06506_consen 45 AELLRKHVSIPVVEIPISGFDILRALAK-AKKYGPKIAVVGYPNIIPGLESIEELLGVDIKIYPYDSEEEIEAAIKQAKA 123 (176)
T ss_dssp HHHHHCC-SS-EEEE---HHHHHHHHHH-CCCCTSEEEEEEESS-SCCHHHHHHHHT-EEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEECCCHhHHHHHHHH-HHhcCCcEEEEecccccHHHHHHHHHhCCceEEEEECCHHHHHHHHHHHHH
Confidence 3445555554444455666665554444 3344444332 222222234444566888999988999999999987653
Q ss_pred hcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcC
Q psy15447 209 RDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDES 255 (457)
Q Consensus 209 ~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa 255 (457)
....+|+-. .-..++|+++|+..+.-++
T Consensus 124 -------~G~~viVGg------------~~~~~~A~~~gl~~v~i~s 151 (176)
T PF06506_consen 124 -------EGVDVIVGG------------GVVCRLARKLGLPGVLIES 151 (176)
T ss_dssp -------TT--EEEES------------HHHHHHHHHTTSEEEESS-
T ss_pred -------cCCcEEECC------------HHHHHHHHHcCCcEEEEEe
Confidence 233454432 2347888999887666543
No 420
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=32.75 E-value=65 Score=29.12 Aligned_cols=34 Identities=6% Similarity=-0.081 Sum_probs=27.4
Q ss_pred cEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEE
Q psy15447 218 KKFIIVEGVYMNSADICPLKDILSLRSKYQARIFV 252 (457)
Q Consensus 218 ~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~ 252 (457)
...+++|= .+..|.+...+++.+++++||+.+|.
T Consensus 173 P~~vicEi-l~~dG~ma~~~~l~~fA~~~~l~iis 206 (230)
T PRK00014 173 PAGVLCEL-MNADGTMMRGASLERYAAKEGLVALA 206 (230)
T ss_pred ceEEEEEE-eCCCCCccCHHHHHHHHHHcCCcEEE
Confidence 35677774 45679999999999999999987753
No 421
>PRK10785 maltodextrin glucosidase; Provisional
Probab=32.44 E-value=1.1e+02 Score=32.34 Aligned_cols=56 Identities=9% Similarity=0.169 Sum_probs=39.2
Q ss_pred CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC-----------------CCCChHHHHHHHHHcCcEEEEEcCc
Q psy15447 194 NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA-----------------DICPLKDILSLRSKYQARIFVDESV 256 (457)
Q Consensus 194 ~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G-----------------~i~~l~~i~~l~~~~g~~li~DEa~ 256 (457)
.|+..+.+.|..+.+ -.+.+|.+.|++...+ ....++++++-||++|+.||+|-+.
T Consensus 176 GDl~GI~~kLdYL~~-------LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V~ 248 (598)
T PRK10785 176 GDLDGISEKLPYLKK-------LGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGVF 248 (598)
T ss_pred cCHHHHHHHHHHHHH-------cCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 477777777765542 4556788887774322 1122789999999999999999984
No 422
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=31.83 E-value=71 Score=28.68 Aligned_cols=34 Identities=6% Similarity=0.089 Sum_probs=27.5
Q ss_pred cEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEE
Q psy15447 218 KKFIIVEGVYMNSADICPLKDILSLRSKYQARIFV 252 (457)
Q Consensus 218 ~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~ 252 (457)
...+++|=+ +..|.+...+++.++|++||+.+|.
T Consensus 169 p~~vicEil-~~dG~ma~~~~l~~fA~~h~l~~is 202 (218)
T PRK00910 169 PAGVLCELT-NPDGTMAKTPEIIAFGKLHNMPVLT 202 (218)
T ss_pred ceEEEEEEe-cCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 467777754 4679999999999999999988753
No 423
>COG4294 Uve UV damage repair endonuclease [DNA replication, recombination, and repair]
Probab=31.55 E-value=4.6e+02 Score=24.87 Aligned_cols=95 Identities=14% Similarity=0.204 Sum_probs=57.1
Q ss_pred CCcEEEecccH-HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEE--Ee--cC----CCHHHHHHHHHhhchhc
Q psy15447 140 LEETALYSFGF-STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQ--YF--KH----NNMQHLEELLRQQDERD 210 (457)
Q Consensus 140 ~~~~i~~~sG~-~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~--~~--~~----~d~~~le~~l~~~~~~~ 210 (457)
.+.-++++|-. +-...+++.+. +|..+++++.+....+. .. .+ ...+++.+.+++..+
T Consensus 136 PdQf~vl~S~~~eV~~ssir~la-----------yH~r~l~~mgl~~Rs~~~lhlgg~~gGK~~~~eqf~kni~~LP~-- 202 (347)
T COG4294 136 PDQFTVLNSPREEVVDSSIRDLA-----------YHYRILDGMGLAERSVWNLHLGGTHGGKKERLEQFIKNIQRLPD-- 202 (347)
T ss_pred CCceEEecCCchHHHHHHHHHHH-----------HHHHHHhhcCCCcCCceEEEeccccCCchhHHHHHHHHHhhcCH--
Confidence 45666667666 45566776543 67777777766521111 11 01 134555555555432
Q ss_pred ccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCc
Q psy15447 211 TLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESV 256 (457)
Q Consensus 211 ~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~ 256 (457)
.-+.-+.+| +.-.....+++..+|++.++.+++|-=|
T Consensus 203 -----~vksRl~LE----NDd~sYs~eelL~lCek~~iPlVfD~HH 239 (347)
T COG4294 203 -----SVKSRLTLE----NDDKSYSTEELLPLCEKLNIPLVFDAHH 239 (347)
T ss_pred -----HHHHhheee----cccccccHHHHHHHHHHhCCCEEEechh
Confidence 222345565 3344566899999999999999999644
No 424
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=30.52 E-value=4e+02 Score=24.81 Aligned_cols=115 Identities=15% Similarity=0.148 Sum_probs=57.2
Q ss_pred HHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCC--EEEE-e-CcccHH--HHHHHHhcCCeEEEecCCCHHHHHHHH
Q psy15447 130 LENDIASFMGLEETALYSFGFSTSASAIAAYVKRND--AVFV-D-ENINFA--IQTGLIASRCKVQYFKHNNMQHLEELL 203 (457)
Q Consensus 130 l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd--~v~~-~-~~~h~~--~~~~~~~~g~~~~~~~~~d~~~le~~l 203 (457)
..+...+++.....+++-+-+..+..++....+.|. .|++ + ++.... +...+.-.|.++..++- .++-..+
T Consensus 97 I~~~~~~~I~~~~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG~~~a~~L~~~gi~v~~i~d---~~~~~~m 173 (282)
T PF01008_consen 97 IADHASELINDGDTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEGRLMAKELAEAGIPVTLIPD---SAVGYVM 173 (282)
T ss_dssp HHHHHHCCC-TTEEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHHHTHHHHHHHTT-EEEEE-G---GGHHHHH
T ss_pred HHHHHHHhccCCeEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhhhhHHHHhhhcceeEEEEec---hHHHHHH
Confidence 344444455455566666666666666655444442 3333 2 222222 33445556777777653 3444455
Q ss_pred Hh-hchhcccCCCCccEEEEEecCCCCCCCCCC--hHHHHHHHHHcCcEEEEE-cCcc
Q psy15447 204 RQ-QDERDTLNSKVTKKFIIVEGVYMNSADICP--LKDILSLRSKYQARIFVD-ESVS 257 (457)
Q Consensus 204 ~~-~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~--l~~i~~l~~~~g~~li~D-Ea~~ 257 (457)
.. . ...++=.+.+..++|.+.. -..++-+|+++++.+++= |.+-
T Consensus 174 ~~~v----------d~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~~~~~K 221 (282)
T PF01008_consen 174 PRDV----------DKVLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVLAESYK 221 (282)
T ss_dssp HCTE----------SEEEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE--GGG
T ss_pred HHhC----------CeeEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEEccccc
Confidence 44 2 2234446677766555544 457777899999877664 3443
No 425
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=29.96 E-value=1.8e+02 Score=20.43 Aligned_cols=53 Identities=9% Similarity=0.117 Sum_probs=34.7
Q ss_pred HHHHHHHHHHcCeeEeccccCccccC-CCCCeEEEEecCCCCH-HHHHHHHHHHH
Q psy15447 393 LQTICDMCIQAGFAITCPSHLDQEAK-KQKPSIRITCNISHTE-QDMNSLIETLC 445 (457)
Q Consensus 393 ~~~~~~~l~~~Gi~v~~~~~~~~~~~-~~~~~lRi~~~~~~t~-edi~~~~~~l~ 445 (457)
...+.+.|.++|+-+.....|..... .....+-+.+....++ ++++++.+-++
T Consensus 7 ~~a~~~~L~~~g~~v~~~~~~~~~l~~~~~tll~i~~~~~~~~~~~~~~l~~~v~ 61 (70)
T PF14258_consen 7 TYALYQLLEEQGVKVERWRKPYEALEADDGTLLVIGPDLRLSEPEEAEALLEWVE 61 (70)
T ss_pred HHHHHHHHHHCCCeeEEecccHHHhCCCCCEEEEEeCCCCCCchHHHHHHHHHHH
Confidence 45688888889999876544422111 2234677777767785 88887766554
No 426
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=29.45 E-value=2.1e+02 Score=22.90 Aligned_cols=47 Identities=13% Similarity=0.177 Sum_probs=29.7
Q ss_pred CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCCh-HHHHHHHHHcCcEEEE
Q psy15447 195 NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPL-KDILSLRSKYQARIFV 252 (457)
Q Consensus 195 d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l-~~i~~l~~~~g~~li~ 252 (457)
+.+.+.+.+++... ...+.+++.... ....+ +++.+.|+++++.||.
T Consensus 57 ~~~~~~~~i~~L~~-------~~~agL~i~~~~----~~~~iP~~~i~~A~~~~lPli~ 104 (123)
T PF07905_consen 57 DEEELREFIRELAE-------KGAAGLGIKTGR----YLDEIPEEIIELADELGLPLIE 104 (123)
T ss_pred CHHHHHHHHHHHHH-------CCCeEEEEeccC----ccccCCHHHHHHHHHcCCCEEE
Confidence 56667777776553 345666664321 12222 7999999999987664
No 427
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=29.37 E-value=5.3e+02 Score=24.97 Aligned_cols=81 Identities=12% Similarity=0.125 Sum_probs=49.3
Q ss_pred ccHHHHHHHHhcCCeEEEecC--CCHHHHHHHHHhhchhcccCCCCccEEEEEec-C--CCC-CCCCCChHHHHHHHHHc
Q psy15447 173 INFAIQTGLIASRCKVQYFKH--NNMQHLEELLRQQDERDTLNSKVTKKFIIVEG-V--YMN-SADICPLKDILSLRSKY 246 (457)
Q Consensus 173 ~h~~~~~~~~~~g~~~~~~~~--~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~-v--~~~-~G~i~~l~~i~~l~~~~ 246 (457)
.+...+..+.-.+.++..-.. .+++++..+.+..... .+..+++++- + +.+ +-...++..+..+.+.+
T Consensus 188 ~N~~LL~~va~~~kPViLk~G~~~ti~E~l~A~e~i~~~------GN~~viL~erG~~tf~~~~~~~ldl~ai~~lk~~~ 261 (335)
T PRK08673 188 QNFDLLKEVGKTNKPVLLKRGMSATIEEWLMAAEYILAE------GNPNVILCERGIRTFETATRNTLDLSAVPVIKKLT 261 (335)
T ss_pred cCHHHHHHHHcCCCcEEEeCCCCCCHHHHHHHHHHHHHc------CCCeEEEEECCCCCCCCcChhhhhHHHHHHHHHhc
Confidence 355566655555554443222 2677776666554321 3445777773 2 211 22345588888888888
Q ss_pred CcEEEEEcCcccc
Q psy15447 247 QARIFVDESVSFG 259 (457)
Q Consensus 247 g~~li~DEa~~~g 259 (457)
+..+|.|-.|+.|
T Consensus 262 ~lPVi~d~sH~~G 274 (335)
T PRK08673 262 HLPVIVDPSHATG 274 (335)
T ss_pred CCCEEEeCCCCCc
Confidence 9999999999855
No 428
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=28.63 E-value=5e+02 Score=24.37 Aligned_cols=112 Identities=6% Similarity=-0.016 Sum_probs=60.1
Q ss_pred HHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCC--EEEEeC--ccc-HH-HHHHHHhcCCeEEEecCCCHHHHHH
Q psy15447 128 LDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRND--AVFVDE--NIN-FA-IQTGLIASRCKVQYFKHNNMQHLEE 201 (457)
Q Consensus 128 ~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd--~v~~~~--~~h-~~-~~~~~~~~g~~~~~~~~~d~~~le~ 201 (457)
.++.+.-+++......+++.+.+.....+|....+.|. .|++.+ +.. +. +...+.-.|.++..+.-+....
T Consensus 97 ~~I~~~a~~~I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~la~eL~~~GI~vtlI~Dsa~~~--- 173 (275)
T PRK08335 97 REIGNIGSELIDDGDVIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGLALANELEFLGIEFEVITDAQLGL--- 173 (275)
T ss_pred HHHHHHHHHHcCCCCEEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHHHHHHHHHHCCCCEEEEeccHHHH---
Confidence 33444445555555566666555555556655544443 455543 332 22 3334555677777665443333
Q ss_pred HHHhhchhcccCCCCccEEEEEecCCCCCCCCCCh--HHHHHHHHHcCcEEEE
Q psy15447 202 LLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPL--KDILSLRSKYQARIFV 252 (457)
Q Consensus 202 ~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l--~~i~~l~~~~g~~li~ 252 (457)
.+++.+ ..++=.+.+..+++.+..+ -.+.-+|+.||+.+++
T Consensus 174 ~m~~vd----------~VivGAD~I~~nG~v~NKiGT~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 174 FAKEAT----------LALVGADNVTRDGYVVNKAGTYLLALACHDNGVPFYV 216 (275)
T ss_pred HHHhCC----------EEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 343321 1233356676665555543 4677788999997765
No 429
>PLN03059 beta-galactosidase; Provisional
Probab=28.53 E-value=7.9e+02 Score=27.16 Aligned_cols=39 Identities=13% Similarity=0.009 Sum_probs=25.5
Q ss_pred CccEEEEEecCCCCC-----C-CCCChHHHHHHHHHcCc---EEEEEc
Q psy15447 216 VTKKFIIVEGVYMNS-----A-DICPLKDILSLRSKYQA---RIFVDE 254 (457)
Q Consensus 216 ~~~~~vi~e~v~~~~-----G-~i~~l~~i~~l~~~~g~---~li~DE 254 (457)
.++.++=+|+-++.. | ....++.++++++++|+ ++-.|.
T Consensus 176 GPIImvQIENEYGs~~~~~~~~d~~Yl~~l~~~~~~~Gi~VPl~t~dg 223 (840)
T PLN03059 176 GPIILSQIENEYGPVEWEIGAPGKAYTKWAADMAVKLGTGVPWVMCKQ 223 (840)
T ss_pred CcEEEEEecccccceecccCcchHHHHHHHHHHHHHcCCCcceEECCC
Confidence 556677788777542 1 12348899999999986 344454
No 430
>TIGR02456 treS_nterm trehalose synthase. Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530).
Probab=28.04 E-value=1.5e+02 Score=30.95 Aligned_cols=56 Identities=13% Similarity=0.130 Sum_probs=36.6
Q ss_pred CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC------------------CCCChHHHHHHHHHcCcEEEEEcC
Q psy15447 194 NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA------------------DICPLKDILSLRSKYQARIFVDES 255 (457)
Q Consensus 194 ~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G------------------~i~~l~~i~~l~~~~g~~li~DEa 255 (457)
.|+..+.+.|....+ -.+..|.+.|++...+ ...+++++++-|+++|+.+|+|=+
T Consensus 25 Gdl~gi~~~Ldyl~~-------LGv~~i~L~Pi~~~~~~~~gY~~~dy~~vd~~~Gt~~df~~Lv~~ah~~Gi~vilD~V 97 (539)
T TIGR02456 25 GDFPGLTSKLDYLKW-------LGVDALWLLPFFQSPLRDDGYDVSDYRAILPEFGTIDDFKDFVDEAHARGMRVIIDLV 97 (539)
T ss_pred cCHHHHHHhHHHHHH-------CCCCEEEECCCcCCCCCCCCCCcccccccChhhCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 466666666655442 3455777777764321 112267888889999999999987
Q ss_pred c
Q psy15447 256 V 256 (457)
Q Consensus 256 ~ 256 (457)
.
T Consensus 98 ~ 98 (539)
T TIGR02456 98 L 98 (539)
T ss_pred c
Confidence 3
No 431
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=28.02 E-value=1.3e+02 Score=28.69 Aligned_cols=36 Identities=11% Similarity=0.286 Sum_probs=24.8
Q ss_pred EEEEEecCCCCCCCCCC-hHHHHHHHHHcCcEEEEEcC
Q psy15447 219 KFIIVEGVYMNSADICP-LKDILSLRSKYQARIFVDES 255 (457)
Q Consensus 219 ~~vi~e~v~~~~G~i~~-l~~i~~l~~~~g~~li~DEa 255 (457)
.+|++.+.. |.|.-.+ +.+|.++|++.|+.+++|-.
T Consensus 131 d~VvlsGSl-P~g~~~d~y~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 131 DIVVLSGSL-PPGVPPDAYAELIRILRQQGAKVILDTS 167 (310)
T ss_pred CEEEEeCCC-CCCCCHHHHHHHHHHHHhcCCeEEEECC
Confidence 356665322 2222222 78999999999999999976
No 432
>PRK09505 malS alpha-amylase; Reviewed
Probab=27.87 E-value=95 Score=33.33 Aligned_cols=21 Identities=19% Similarity=0.324 Sum_probs=19.2
Q ss_pred hHHHHHHHHHcCcEEEEEcCc
Q psy15447 236 LKDILSLRSKYQARIFVDESV 256 (457)
Q Consensus 236 l~~i~~l~~~~g~~li~DEa~ 256 (457)
++++++-||++|+.+|+|-+.
T Consensus 294 fk~Lv~~aH~~Gi~VilD~V~ 314 (683)
T PRK09505 294 LRTLVDEAHQRGIRILFDVVM 314 (683)
T ss_pred HHHHHHHHHHCCCEEEEEECc
Confidence 789999999999999999874
No 433
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=27.43 E-value=92 Score=27.90 Aligned_cols=34 Identities=12% Similarity=0.207 Sum_probs=27.6
Q ss_pred cEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEE
Q psy15447 218 KKFIIVEGVYMNSADICPLKDILSLRSKYQARIFV 252 (457)
Q Consensus 218 ~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~ 252 (457)
...+++|=+ +..|.+...+++.+++++||+.+|.
T Consensus 168 p~~vicEil-~~dG~ma~~~~~~~fA~~~~l~~is 201 (214)
T PRK01792 168 EAGVICEIT-NDDGTMARTPEIVEFAKKFGYAVVT 201 (214)
T ss_pred ceEEEEEEe-cCCCCccCHHHHHHHHHHcCCcEEE
Confidence 466777754 4679999999999999999998753
No 434
>PF03796 DnaB_C: DnaB-like helicase C terminal domain; InterPro: IPR007694 The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis. ; GO: 0003678 DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication; PDB: 1Q57_E 1E0K_D 1E0J_B 1CR2_A 1CR4_A 1CR1_A 1CR0_A 1MI8_A 2R6D_B 2R6C_C ....
Probab=27.29 E-value=3.1e+02 Score=25.17 Aligned_cols=56 Identities=5% Similarity=0.143 Sum_probs=37.1
Q ss_pred CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCC--CC-C-------hHHHHHHHHHcCcEEEEEc
Q psy15447 194 NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD--IC-P-------LKDILSLRSKYQARIFVDE 254 (457)
Q Consensus 194 ~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~--i~-~-------l~~i~~l~~~~g~~li~DE 254 (457)
.++++++..+.....+ .....+|+++.++-.... .. . ..+|.++|+++|+.+|+=-
T Consensus 112 ~~~~~i~~~i~~~~~~-----~~~~~~v~IDyl~ll~~~~~~~~~~~~~~~i~~~Lk~lA~~~~i~vi~~s 177 (259)
T PF03796_consen 112 LTIDDIESKIRRLKRE-----GKKVDVVFIDYLQLLKSEDSSDNRRQEIGEISRELKALAKELNIPVIALS 177 (259)
T ss_dssp -BHHHHHHHHHHHHHH-----STTEEEEEEEEGGGSBTSCSSSCCHHHHHHHHHHHHHHHHHHTSEEEEEE
T ss_pred CCHHHHHHHHHHHHhh-----ccCCCEEEechHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHcCCeEEEcc
Confidence 3678888877765432 135678999987743321 11 1 4589999999999988743
No 435
>PF10678 DUF2492: Protein of unknown function (DUF2492); InterPro: IPR019620 This entry describes a family of small cytosolic proteins, about 80 amino acids in length, in which the eight invariant residues include three His residues and two Cys residues. Two pairs of these invariant residues occur in motifs HxH (where x is A or G) and CxH, both of which suggest metal-binding activity. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulphatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulphur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulphatase/maturase systems.
Probab=26.53 E-value=1.3e+02 Score=22.09 Aligned_cols=47 Identities=13% Similarity=0.093 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhhcCCCcEEEecccHH-HHHHHHHhhcCCCCEEEEeCc
Q psy15447 126 VHLDLENDIASFMGLEETALYSFGFS-TSASAIAAYVKRNDAVFVDEN 172 (457)
Q Consensus 126 ~~~~l~~~la~~~g~~~~i~~~sG~~-a~~~ai~a~~~~gd~v~~~~~ 172 (457)
...+|.+.+.+-+|.+..+.+.|+.. .....+.-+.++|+++..++.
T Consensus 21 t~~~L~~ai~~~FG~~arFhTCSae~m~a~eLv~FL~~rgKfi~~~~g 68 (78)
T PF10678_consen 21 TKEELKAAIIEKFGEDARFHTCSAEGMTADELVDFLEERGKFIPSDDG 68 (78)
T ss_pred CHHHHHHHHHHHhCCCceEEecCCCCCCHHHHHHHHHHcCCEeecCCC
Confidence 35789999999999988777766653 233445566788888776554
No 436
>PRK11633 cell division protein DedD; Provisional
Probab=26.48 E-value=2.5e+02 Score=25.50 Aligned_cols=52 Identities=12% Similarity=0.106 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 392 LLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 392 ~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
.+..+.++|+..|+-......- ...+...|+.+....+++++++....|++.
T Consensus 162 ~A~~l~~kL~~~G~~Ay~~~~~----~~~G~~tRV~VGP~~sk~~ae~~~~~Lk~~ 213 (226)
T PRK11633 162 KVNEIVAKLRLSGYRVYTVPST----PVQGKITRIYVGPDASKDKLKGSLGELKQL 213 (226)
T ss_pred HHHHHHHHHHHCCCeeEEEeee----cCCCcEEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 6788999999999765432110 122346788888888999999999999875
No 437
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=26.41 E-value=1e+02 Score=27.29 Aligned_cols=34 Identities=9% Similarity=0.169 Sum_probs=27.8
Q ss_pred cEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEE
Q psy15447 218 KKFIIVEGVYMNSADICPLKDILSLRSKYQARIFV 252 (457)
Q Consensus 218 ~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~ 252 (457)
...+++|=+ +..|.+...+++.+++++||+.+|.
T Consensus 158 p~~vicEil-~~dG~m~~~~~~~~fA~~~~l~~is 191 (199)
T TIGR00506 158 PAGVICEMM-NDDGTMARKPELMEYAKKHNLKLIS 191 (199)
T ss_pred ceEEEEEEe-CCCCCccCHHHHHHHHHHcCCcEEE
Confidence 467777754 4589999999999999999998753
No 438
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=26.18 E-value=5.8e+02 Score=24.31 Aligned_cols=114 Identities=12% Similarity=0.115 Sum_probs=58.1
Q ss_pred HHhhcCCCcEEEecccH--------HHHHHHHHhhcCCC--CEEEEe--CcccHH---HHHHHHhcCCeEEEecCCCHHH
Q psy15447 134 IASFMGLEETALYSFGF--------STSASAIAAYVKRN--DAVFVD--ENINFA---IQTGLIASRCKVQYFKHNNMQH 198 (457)
Q Consensus 134 la~~~g~~~~i~~~sG~--------~a~~~ai~a~~~~g--d~v~~~--~~~h~~---~~~~~~~~g~~~~~~~~~d~~~ 198 (457)
-+++......+++.+.+ ......+....+.| -.|++. ++.+.. +...+.-.|.++..+.-+ .
T Consensus 112 a~~~I~~g~~ILT~~~Sg~lat~~~~tv~~~l~~A~~~g~~~~V~v~EsrP~~~G~~~~a~~L~~~gI~vtlI~Ds---a 188 (303)
T TIGR00524 112 GAKLIKDGDTVLTHCNAGALATSDYGTALGVIRSAWEDGKRIRVIACETRPRNQGSRLTAWELMQDGIDVTLITDS---M 188 (303)
T ss_pred HHHHccCCCEEEEecCCccccccCcchHHHHHHHHHHcCCceEEEECCCCCccchHHHHHHHHHHCCCCEEEEChh---H
Confidence 33444444455554333 33444554444333 344443 344322 334555667777666432 3
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCCh--HHHHHHHHHcCcEEEEE-cCccc
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPL--KDILSLRSKYQARIFVD-ESVSF 258 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l--~~i~~l~~~~g~~li~D-Ea~~~ 258 (457)
+...++... -...++=.+.+..++|.+... -.+.-+|+.|++.+++= |.+.+
T Consensus 189 ~~~~m~~~~--------vd~VlvGAd~v~~nG~v~nk~GT~~lA~~Ak~~~vPv~V~a~s~K~ 243 (303)
T TIGR00524 189 AAYFMQKGE--------IDAVIVGADRIARNGDVANKIGTYQLAVLAKEFRIPFFVAAPLSTF 243 (303)
T ss_pred HHHHccccC--------CCEEEEcccEEecCCCEeEhhhHHHHHHHHHHhCCCEEEecccccc
Confidence 334443100 112233367777666666553 47777889999877754 45554
No 439
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=26.04 E-value=55 Score=29.31 Aligned_cols=19 Identities=16% Similarity=0.443 Sum_probs=17.0
Q ss_pred hHHHHHHHHHcCcEEEEEc
Q psy15447 236 LKDILSLRSKYQARIFVDE 254 (457)
Q Consensus 236 l~~i~~l~~~~g~~li~DE 254 (457)
..+++++|++||+.||+++
T Consensus 54 a~~~~~lc~~~~v~liINd 72 (211)
T COG0352 54 AEKLRALCQKYGVPLIIND 72 (211)
T ss_pred HHHHHHHHHHhCCeEEecC
Confidence 4699999999999998887
No 440
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=26.04 E-value=90 Score=27.52 Aligned_cols=35 Identities=14% Similarity=0.151 Sum_probs=27.3
Q ss_pred ccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEE
Q psy15447 217 TKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFV 252 (457)
Q Consensus 217 ~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~ 252 (457)
....+++|=+ +..|.+...+++.+++++||+.+|.
T Consensus 152 ~p~avi~eil-~~dG~~~~~~~~~~fA~~~~l~~vs 186 (194)
T PF00926_consen 152 SPVAVICEIL-DDDGDMARRDELEEFAKKHGLPIVS 186 (194)
T ss_dssp -SBEEEEEBB-ETTSSBHCHHHHHHHHHHTT-EEEE
T ss_pred CCcEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 3467777755 4689999999999999999998764
No 441
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=25.87 E-value=74 Score=25.83 Aligned_cols=21 Identities=19% Similarity=0.415 Sum_probs=13.5
Q ss_pred CChHHHHHHHHHcCcEEEEEc
Q psy15447 234 CPLKDILSLRSKYQARIFVDE 254 (457)
Q Consensus 234 ~~l~~i~~l~~~~g~~li~DE 254 (457)
.|-+.+.++|++|++.|+.=.
T Consensus 92 ~~p~~l~e~a~~~~ipll~t~ 112 (127)
T PF02603_consen 92 EPPPELIELAEKYNIPLLRTP 112 (127)
T ss_dssp ---HHHHHHHHHCT--EEEES
T ss_pred CCCHHHHHHHHHhCCcEEEcC
Confidence 567999999999999776543
No 442
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=25.76 E-value=5.5e+02 Score=23.92 Aligned_cols=80 Identities=11% Similarity=0.106 Sum_probs=43.9
Q ss_pred cHHHHHHHHhcCCeEEEecC--CCHHHHHHHHHhhchhcccCCCCccEEEEEecCC----CCCCCCCChHHHHHHHHHcC
Q psy15447 174 NFAIQTGLIASRCKVQYFKH--NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY----MNSADICPLKDILSLRSKYQ 247 (457)
Q Consensus 174 h~~~~~~~~~~g~~~~~~~~--~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~----~~~G~i~~l~~i~~l~~~~g 247 (457)
+..++..+.-.+.++..-.. .+++++..+.+..... .+..+++++--. +-.-...++..+..+.+.++
T Consensus 123 n~~LL~~~a~~gkPV~lk~G~~~s~~e~~~A~e~i~~~------Gn~~i~L~~rG~~t~~~Y~~~~vdl~~i~~lk~~~~ 196 (266)
T PRK13398 123 NFELLKEVGKTKKPILLKRGMSATLEEWLYAAEYIMSE------GNENVVLCERGIRTFETYTRNTLDLAAVAVIKELSH 196 (266)
T ss_pred CHHHHHHHhcCCCcEEEeCCCCCCHHHHHHHHHHHHhc------CCCeEEEEECCCCCCCCCCHHHHHHHHHHHHHhccC
Confidence 44455555444544432222 2677776666554321 233455565321 11111224677777777789
Q ss_pred cEEEEEcCcccc
Q psy15447 248 ARIFVDESVSFG 259 (457)
Q Consensus 248 ~~li~DEa~~~g 259 (457)
..+++|-.|+.|
T Consensus 197 ~pV~~D~sHs~G 208 (266)
T PRK13398 197 LPIIVDPSHATG 208 (266)
T ss_pred CCEEEeCCCccc
Confidence 999999988864
No 443
>PF06877 RraB: Regulator of ribonuclease activity B; InterPro: IPR009671 This entry occurs in several hypothetical bacterial proteins of around 120 residues in length. The function of these proteins is unknown. The protein structure has been determined for one member of this group, the hypothetical protein VCO424 from Vibrio cholerae; it has an alpha+beta sandwich fold.; PDB: 1NXI_A.
Probab=25.58 E-value=2.6e+02 Score=21.47 Aligned_cols=59 Identities=8% Similarity=0.110 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHcCeeEeccccCccccCCCCC--eEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 392 LLQTICDMCIQAGFAITCPSHLDQEAKKQKP--SIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 392 ~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~--~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
.+.+++..+.+.|.-+.....- . ..+.. .+.++.....+.+.|......|.++.++...
T Consensus 37 ~~~~f~~~~~~~g~~v~~~~~~-~--~d~~~~~~~~~~~~~~~~~~~I~~~~~~l~~lA~~~~g 97 (104)
T PF06877_consen 37 DAEKFAEELEKLGYEVESAEED-E--EDGDGPYCLDISREMVLDYEDINAITQELEDLAKEFGG 97 (104)
T ss_dssp HHHHHHHHHHHHS---B----B----SS-SSBEEEEEEEEE-S-HHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHCCCEEEEeecc-c--CCCCceEEEEEEEecCCCHHHHHHHHHHHHHHHHHhCc
Confidence 7788999999999887653310 0 11122 4677777778899999999999888776654
No 444
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=24.79 E-value=1.9e+02 Score=26.03 Aligned_cols=53 Identities=8% Similarity=0.122 Sum_probs=34.4
Q ss_pred CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC-CC-CCC--------hHHHHHHHHHcCcEEEE
Q psy15447 194 NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS-AD-ICP--------LKDILSLRSKYQARIFV 252 (457)
Q Consensus 194 ~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~-G~-i~~--------l~~i~~l~~~~g~~li~ 252 (457)
.++++++..+.+...+ ....+|++.+++... +. -.. +..|+++|+++|+.+++
T Consensus 106 ~~~~~l~~~i~~~~~~------~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 106 LTVSDIRSRARRLKKE------HGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCHHHHHHHHHHHHHh------cCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 3677887777654321 355789999877532 21 111 46888999999987665
No 445
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=24.63 E-value=1.9e+02 Score=30.13 Aligned_cols=54 Identities=15% Similarity=0.327 Sum_probs=35.0
Q ss_pred CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC------------------CCCCChHHHHHHHHHcCcEEEEEcC
Q psy15447 195 NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS------------------ADICPLKDILSLRSKYQARIFVDES 255 (457)
Q Consensus 195 d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~------------------G~i~~l~~i~~l~~~~g~~li~DEa 255 (457)
|+..+.+.|..... -.+..|.+.|++... |....++++++-|+++|+.+|+|=+
T Consensus 25 ~~~gi~~~l~yl~~-------lG~~~i~l~Pi~~~~~~~~gY~~~d~~~id~~~Gt~~~~~~lv~~ah~~gi~vilD~v 96 (543)
T TIGR02403 25 DLRGIIEKLDYLKK-------LGVDYIWLNPFYVSPQKDNGYDVSDYYAINPLFGTMADFEELVSEAKKRNIKIMLDMV 96 (543)
T ss_pred CHHHHHHhHHHHHH-------cCCCEEEECCcccCCCCCCCCCccccCccCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 55566555544432 344567777665421 1222378999999999999999976
No 446
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=24.46 E-value=4.1e+02 Score=22.02 Aligned_cols=40 Identities=10% Similarity=0.090 Sum_probs=27.1
Q ss_pred CccEEEEEec-CCCCCCCCCChHHHHHHHHHcCcEEEEEcC
Q psy15447 216 VTKKFIIVEG-VYMNSADICPLKDILSLRSKYQARIFVDES 255 (457)
Q Consensus 216 ~~~~~vi~e~-v~~~~G~i~~l~~i~~l~~~~g~~li~DEa 255 (457)
+.+.+||.-+ +.+..+...+-..|++.|-+|++.++..-.
T Consensus 74 g~i~lVInt~dp~~~~~~~~D~~~IRR~Av~~~IP~~T~l~ 114 (142)
T PRK05234 74 GKIDMLIFFRDPLTAQPHDPDVKALLRLADVWNIPVATNRA 114 (142)
T ss_pred CceeEEEEecCCCCCCcccchHHHHHHHHHHcCCCEEcCHH
Confidence 4556666543 134444355678999999999999887753
No 447
>KOG3974|consensus
Probab=24.19 E-value=93 Score=28.69 Aligned_cols=49 Identities=16% Similarity=0.253 Sum_probs=32.5
Q ss_pred CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC-CChHHHHHHHHHcCcEEEEEc
Q psy15447 194 NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI-CPLKDILSLRSKYQARIFVDE 254 (457)
Q Consensus 194 ~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i-~~l~~i~~l~~~~g~~li~DE 254 (457)
|+.+.+++.+.+. -++++-|-.+-.-.+ ..+++|.+.+++.++.+++|.
T Consensus 90 ~av~~i~k~L~Rl------------havVIGPGLGRdp~~~k~i~~iley~~~~dvP~VIDa 139 (306)
T KOG3974|consen 90 NAVDIIEKLLQRL------------HAVVIGPGLGRDPAILKEIAKILEYLRGKDVPLVIDA 139 (306)
T ss_pred chHhHHHHHHhhe------------eEEEECCCCCCCHHHHHHHHHHHHHHhcCCCcEEEcC
Confidence 3556677777653 367775544321111 126799999999999999995
No 448
>TIGR03853 matur_matur probable metal-binding protein. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulfatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulfur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulfatase/maturase systems.
Probab=24.18 E-value=1.6e+02 Score=21.63 Aligned_cols=46 Identities=13% Similarity=0.084 Sum_probs=32.9
Q ss_pred HHHHHHHHHhhcCCCcEEEecccHH-HHHHHHHhhcCCCCEEEEeCc
Q psy15447 127 HLDLENDIASFMGLEETALYSFGFS-TSASAIAAYVKRNDAVFVDEN 172 (457)
Q Consensus 127 ~~~l~~~la~~~g~~~~i~~~sG~~-a~~~ai~a~~~~gd~v~~~~~ 172 (457)
..+|++.+.+-+|.+..+-+.|+.. .....+.-+.++|+++-.++.
T Consensus 20 ~~~L~~~i~~~FG~~arFhTCSa~~m~a~~Li~FL~~kgKfi~~~~g 66 (77)
T TIGR03853 20 RESLKAAIEQKFGEDARFHTCSAEGMTADELLQFLLKKGKFIESDGG 66 (77)
T ss_pred HHHHHHHHHHHhCCCceEeecccccCCHHHHHHHHHHCCCEeecCCc
Confidence 5789999999999887777766653 233455566788888776554
No 449
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=24.11 E-value=3.6e+02 Score=23.04 Aligned_cols=102 Identities=13% Similarity=0.151 Sum_probs=54.7
Q ss_pred HHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhc
Q psy15447 131 ENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERD 210 (457)
Q Consensus 131 ~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~ 210 (457)
.+.|.+.+|. ++++..+|.+-.+.|..+...... | .++--+..+...|.--.+.|.++.+....
T Consensus 75 ~~sle~iyGK-RvIiiGGGAqVsqVA~GAIsEADR--------H-----NiRGERISvDTiPlVGEE~laEAVkAV~r-- 138 (218)
T COG1707 75 HRSLEEIYGK-RVIIIGGGAQVSQVARGAISEADR--------H-----NIRGERISVDTIPLVGEEELAEAVKAVAR-- 138 (218)
T ss_pred cchHHHHhCc-EEEEECCchhHHHHHHhhcchhhh--------c-----ccccceeeeecccccChHHHHHHHHHHhc--
Confidence 3445556664 577788888776767666543211 1 01111122333444445666666655431
Q ss_pred ccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcC
Q psy15447 211 TLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDES 255 (457)
Q Consensus 211 ~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa 255 (457)
-++..++++-+.. ++|.+ -+++.++.++||+.+|.=..
T Consensus 139 ----LpRv~iLVLAGsl-MGGkI--teaVk~lr~~hgI~VISL~M 176 (218)
T COG1707 139 ----LPRVGILVLAGSL-MGGKI--TEAVKELREEHGIPVISLNM 176 (218)
T ss_pred ----cccceeEEEeccc-ccchH--HHHHHHHHHhcCCeEEEecc
Confidence 1334445554322 34444 36778888999999987543
No 450
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=23.52 E-value=42 Score=31.45 Aligned_cols=22 Identities=14% Similarity=0.282 Sum_probs=19.6
Q ss_pred ChHHHHHHHHHcCcEEEEEcCc
Q psy15447 235 PLKDILSLRSKYQARIFVDESV 256 (457)
Q Consensus 235 ~l~~i~~l~~~~g~~li~DEa~ 256 (457)
.++++++.|+++|+.+|+|=+.
T Consensus 53 d~~~Lv~~~h~~gi~VilD~V~ 74 (316)
T PF00128_consen 53 DFKELVDAAHKRGIKVILDVVP 74 (316)
T ss_dssp HHHHHHHHHHHTTCEEEEEEET
T ss_pred hhhhhhhccccccceEEEeeec
Confidence 3789999999999999999874
No 451
>PF15183 MRAP: Melanocortin-2 receptor accessory protein family
Probab=22.89 E-value=77 Score=23.41 Aligned_cols=21 Identities=24% Similarity=0.624 Sum_probs=16.4
Q ss_pred cchhhhhhhHHHHHHHHHHhh
Q psy15447 7 LDFYTSVGLFLPLTLFIVLSL 27 (457)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~ 27 (457)
+-|+.|...|..+++||++--
T Consensus 40 I~FWv~LA~FV~~lF~iL~~m 60 (90)
T PF15183_consen 40 IAFWVSLAAFVVFLFLILLYM 60 (90)
T ss_pred hhHHHHHHHHHHHHHHHHHHH
Confidence 358888888998888888743
No 452
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=22.78 E-value=1.6e+02 Score=29.07 Aligned_cols=34 Identities=12% Similarity=0.311 Sum_probs=26.8
Q ss_pred EEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEc
Q psy15447 219 KFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDE 254 (457)
Q Consensus 219 ~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DE 254 (457)
.++++. -| .-|.+.+.+++.++|++.|+.+++|-
T Consensus 145 ~~vVLS-DY-~KG~L~~~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 145 DALVLS-DY-AKGVLTNVQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred CEEEEe-cc-ccccchhHHHHHHHHHHcCCcEEECC
Confidence 355553 23 34888889999999999999999994
No 453
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=22.55 E-value=80 Score=20.66 Aligned_cols=27 Identities=22% Similarity=0.410 Sum_probs=17.6
Q ss_pred cchhhhhhhHHHHHHHH-HHhhccccCC
Q psy15447 7 LDFYTSVGLFLPLTLFI-VLSLSLSKHK 33 (457)
Q Consensus 7 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 33 (457)
..|+.++++.++.++|+ ++-..|++++
T Consensus 7 ~~~~~~~~~v~~~~~F~gi~~w~~~~~~ 34 (49)
T PF05545_consen 7 QGFARSIGTVLFFVFFIGIVIWAYRPRN 34 (49)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 35677777777777664 4466676654
No 454
>PRK00083 frr ribosome recycling factor; Reviewed
Probab=22.51 E-value=5.2e+02 Score=22.57 Aligned_cols=51 Identities=18% Similarity=0.226 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 392 LLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 392 ~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
....+.++..+.++-+.|.. .++.+|+.+|. .|+|-=.+++..+++.....
T Consensus 74 ~i~~I~kAI~~s~lgl~P~~--------dg~~Iri~iP~-lT~E~R~elvK~~k~~~E~a 124 (185)
T PRK00083 74 MLKAIEKAIRASDLGLNPSN--------DGTVIRLPIPP-LTEERRKELVKQVKKEAEEA 124 (185)
T ss_pred HHHHHHHHHHHCCCCCCccc--------CCCEEEecCCC-CCHHHHHHHHHHHHHHHHHH
Confidence 56678888888776555532 35789999874 68887777777777766544
No 455
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=21.94 E-value=2.4e+02 Score=29.55 Aligned_cols=55 Identities=11% Similarity=0.225 Sum_probs=35.8
Q ss_pred CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC-C-----------------CCCCChHHHHHHHHHcCcEEEEEcCc
Q psy15447 195 NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN-S-----------------ADICPLKDILSLRSKYQARIFVDESV 256 (457)
Q Consensus 195 d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~-~-----------------G~i~~l~~i~~l~~~~g~~li~DEa~ 256 (457)
|+..+.+.|....+ -.+..|.+.|++.. . |...+++++++.|+++|+.+|+|=+.
T Consensus 31 dl~gi~~~ldyl~~-------lGv~~i~l~P~~~~~~~~~gY~~~d~~~id~~~Gt~~d~~~lv~~~h~~gi~vilD~V~ 103 (551)
T PRK10933 31 DLRGVTQRLDYLQK-------LGVDAIWLTPFYVSPQVDNGYDVANYTAIDPTYGTLDDFDELVAQAKSRGIRIILDMVF 103 (551)
T ss_pred CHHHHHHhhHHHHh-------CCCCEEEECCCCCCCCCCCCCCcccCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 56666555554442 34556777776521 1 11223789999999999999999873
No 456
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=21.86 E-value=1.4e+02 Score=28.63 Aligned_cols=59 Identities=19% Similarity=0.260 Sum_probs=33.7
Q ss_pred CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCCh----HHHHHHHHHcCcEEEEEc-Cccccc
Q psy15447 195 NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPL----KDILSLRSKYQARIFVDE-SVSFGT 260 (457)
Q Consensus 195 d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l----~~i~~l~~~~g~~li~DE-a~~~g~ 260 (457)
+.+..++.+++.... +..+.|++- +++|+|.+..- ++|+++.++.-++++++. +.|.|.
T Consensus 81 ~~~~~~~~l~~~~~~------~~vk~vvL~-inSPGG~v~as~~i~~~l~~l~~~~PV~v~v~~~AASGGY 144 (317)
T COG0616 81 GGDDIEEILRAARAD------PSVKAVVLR-INSPGGSVVASELIARALKRLRAKKPVVVSVGGYAASGGY 144 (317)
T ss_pred cHHHHHHHHHHHhcC------CCCceEEEE-EECcCCchhHHHHHHHHHHHHhhcCCEEEEECCeecchhh
Confidence 566667767665431 233333332 44688888774 455555555557888888 445443
No 457
>PF11395 DUF2873: Protein of unknown function (DUF2873); InterPro: IPR021532 This entry is represented by the human SARS coronavirus, Orf7b; it is a family of uncharacterised viral proteins.
Probab=21.72 E-value=1.1e+02 Score=18.65 Aligned_cols=16 Identities=31% Similarity=0.357 Sum_probs=9.3
Q ss_pred ccccccchhhhhhhHH
Q psy15447 2 IVTEQLDFYTSVGLFL 17 (457)
Q Consensus 2 ~~~~~~~~~~~~~~~~ 17 (457)
+--.-.|||--+-.||
T Consensus 2 ~~ltl~dfylc~l~~l 17 (43)
T PF11395_consen 2 NHLTLFDFYLCFLSFL 17 (43)
T ss_pred CceehhHHHHHHHHHH
Confidence 3334579997654443
No 458
>PRK09319 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II/unknown domain fusion protein; Provisional
Probab=21.54 E-value=1.2e+02 Score=31.33 Aligned_cols=35 Identities=9% Similarity=0.114 Sum_probs=29.0
Q ss_pred cEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEE
Q psy15447 218 KKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVD 253 (457)
Q Consensus 218 ~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~D 253 (457)
.+++++| +.+..|.+..++++.++|++||+.+|.-
T Consensus 162 PaaVicE-i~~~dG~mar~~~l~~fA~~h~L~iisi 196 (555)
T PRK09319 162 PAGVICE-IQNPDGSMARLPELKEYAKQHGLKLISI 196 (555)
T ss_pred ceEEEEE-EecCCCCccCHHHHHHHHHHcCCcEEEh
Confidence 4677777 5667899999999999999999877543
No 459
>KOG1251|consensus
Probab=21.50 E-value=6.5e+02 Score=23.27 Aligned_cols=65 Identities=12% Similarity=0.083 Sum_probs=39.8
Q ss_pred CCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC--CHHHHHHHHH
Q psy15447 140 LEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN--NMQHLEELLR 204 (457)
Q Consensus 140 ~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~--d~~~le~~l~ 204 (457)
.+.++.++||.+|-..++.+- .+---.|+++...-.+-..+++-.|+.++++... |-|.+.+.+.
T Consensus 73 ~kgvithSSGNHaqAlalaAk~~giPa~IVvP~~AP~~Kv~a~~~Yga~ii~~e~~~~sRE~va~~lt 140 (323)
T KOG1251|consen 73 AKGVITHSSGNHAQALALAAKILGIPATIVVPKDAPICKVAATRGYGANIIFCEPTVESRESVAKDLT 140 (323)
T ss_pred cCceEeecCCcHHHHHHHHHHhcCCCeEEEecCCChHHHHHHHHhcCceEEEecCccchHHHHHHHHH
Confidence 334677788887655554432 2223456777777667777888888888887653 3444444443
No 460
>TIGR00496 frr ribosome recycling factor. This model finds only eubacterial proteins. Mitochondrial and/or chloroplast forms might be expected but are not currently known. This protein was previously called ribosome releasing factor. By releasing ribosomes from mRNA at the end of protein biosynthesis, it prevents inappropriate translation from 3-prime regions of the mRNA and frees the ribosome for new rounds of translation. EGAD|53116|YHR038W is part of the frr superfamily.
Probab=21.47 E-value=5.4e+02 Score=22.27 Aligned_cols=51 Identities=16% Similarity=0.160 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 392 LLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 392 ~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
....+.+++.+.++-+.|.. .++.+|+.+|. .|+|-=.+++..+++.....
T Consensus 65 ~~~~I~kAI~~s~lglnP~~--------dg~~Iri~iP~-lT~E~RkelvK~~k~~~E~a 115 (176)
T TIGR00496 65 NINAIEKAIQRSDLGLNPNN--------DGSVIRVNFPP-LTEERRKELVKHAKKIAEQA 115 (176)
T ss_pred hHHHHHHHHHHCCCCCCccc--------CCCEEEecCCC-CCHHHHHHHHHHHHHHHHHH
Confidence 56678888888877655532 35789999766 67777777777776665544
No 461
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=21.32 E-value=1.7e+02 Score=25.22 Aligned_cols=36 Identities=6% Similarity=0.250 Sum_probs=20.8
Q ss_pred ccEEEEEecCCCCCCC-CCC-------hHHHHHHHHHcCcEEEE
Q psy15447 217 TKKFIIVEGVYMNSAD-ICP-------LKDILSLRSKYQARIFV 252 (457)
Q Consensus 217 ~~~~vi~e~v~~~~G~-i~~-------l~~i~~l~~~~g~~li~ 252 (457)
...+||+++.....+. ... +..+.++|+++|+.+++
T Consensus 141 ~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~ 184 (193)
T PF13481_consen 141 GPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVIL 184 (193)
T ss_dssp --SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEEE
T ss_pred CCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 3569999998876443 221 56889999999876553
No 462
>PRK02289 4-oxalocrotonate tautomerase; Provisional
Probab=21.17 E-value=2.7e+02 Score=18.86 Aligned_cols=30 Identities=13% Similarity=0.140 Sum_probs=24.0
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 423 SIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 423 ~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
.+++......|+|+..++.+.+-+++.+.-
T Consensus 3 ~i~i~~~~Grs~EqK~~L~~~it~a~~~~~ 32 (60)
T PRK02289 3 FVRIDLFEGRSQEQKNALAREVTEVVSRIA 32 (60)
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHHHh
Confidence 567777666799999999999988876653
No 463
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=21.04 E-value=5e+02 Score=24.32 Aligned_cols=28 Identities=29% Similarity=0.409 Sum_probs=15.7
Q ss_pred cchhhhhh--hHHHHHHHHHHhhccccCCC
Q psy15447 7 LDFYTSVG--LFLPLTLFIVLSLSLSKHKK 34 (457)
Q Consensus 7 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 34 (457)
.|-++++. +|.+|++|.++.|...++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 32 (285)
T PF01972_consen 3 MDPFTSLFSLLFWLFFIFLFLQPVLQQRML 32 (285)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566643 23445555667777766553
No 464
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=20.96 E-value=4.5e+02 Score=24.57 Aligned_cols=148 Identities=9% Similarity=0.069 Sum_probs=65.7
Q ss_pred hhhHHHHHHHHHhcCCCCCCCCC-cccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEe--Ccc
Q psy15447 97 PDIEKCAIDCIDKNGVGSCGPRG-FYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVD--ENI 173 (457)
Q Consensus 97 p~i~~a~~~~l~~~~~~~~~~~~-~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~--~~~ 173 (457)
.++.+.+++.|++.|...-.... ......-...+.+.+.++...+-.++++.|+.|...+.+.....-.+|+.. ++.
T Consensus 14 ~~~~~gf~~~L~~~g~~~~~~~~~~~~a~~d~~~~~~~~~~l~~~~~DlIi~~gt~aa~~~~~~~~~~iPVVf~~V~dp~ 93 (294)
T PF04392_consen 14 DDIVRGFKDGLKELGYDEKNVEIEYKNAEGDPEKLRQIARKLKAQKPDLIIAIGTPAAQALAKHLKDDIPVVFCGVSDPV 93 (294)
T ss_dssp HHHHHHHHHHHHHTT--CCCEEEEEEE-TT-HHHHHHHHHHHCCTS-SEEEEESHHHHHHHHHH-SS-S-EEEECES-TT
T ss_pred HHHHHHHHHHHHHcCCccccEEEEEecCCCCHHHHHHHHHHHhcCCCCEEEEeCcHHHHHHHHhcCCCcEEEEEeccChh
Confidence 45778888888887754300010 011122234455555555555556888888887777766654433333321 222
Q ss_pred cHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEE
Q psy15447 174 NFAIQTGLIASRCKVQYF-KHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFV 252 (457)
Q Consensus 174 h~~~~~~~~~~g~~~~~~-~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~ 252 (457)
...........+.++.-+ ...+++.--+.+++.. |.-++..++.++-.. ......+.+.+.++++|+-++.
T Consensus 94 ~~~l~~~~~~~~~nvTGv~~~~~~~~~l~l~~~l~------P~~k~igvl~~~~~~--~~~~~~~~~~~~a~~~g~~l~~ 165 (294)
T PF04392_consen 94 GAGLVDSLDRPGKNVTGVSERPPIEKQLELIKKLF------PDAKRIGVLYDPSEP--NSVAQIEQLRKAAKKLGIELVE 165 (294)
T ss_dssp TTTS-S-SSS--SSEEEEEE---HHHHHHHHHHHS------TT--EEEEEEETT-H--HHHHHHHHHHHHHHHTT-EEEE
T ss_pred hhhccccccCCCCCEEEEECCcCHHHHHHHHHHhC------CCCCEEEEEecCCCc--cHHHHHHHHHHHHHHcCCEEEE
Confidence 222222222222233322 2234444334444443 212333355543221 1234477899999999987653
No 465
>PRK09802 DNA-binding transcriptional regulator AgaR; Provisional
Probab=20.47 E-value=6.9e+02 Score=23.18 Aligned_cols=120 Identities=11% Similarity=0.058 Sum_probs=62.1
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCC-EEEEeCcccHHHHHHHHhcCCeEEEec----CC----
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRND-AVFVDENINFAIQTGLIASRCKVQYFK----HN---- 194 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd-~v~~~~~~h~~~~~~~~~~g~~~~~~~----~~---- 194 (457)
.+...+++++.+++......+|+.+|+.....+ +.+....+ .|+.........+. ...+.+++-.. ++
T Consensus 90 ~~~K~~IA~~Aa~~I~dgd~Ifld~GtT~~~la-~~L~~~~~ltVvTnsl~ia~~l~--~~~~~~v~llGG~~~~~~~~~ 166 (269)
T PRK09802 90 TAMKRSVAKAAVELIQPGHRVILDSGTTTFEIA-RLMRKHTDVIAMTNGMNVANALL--EAEGVELLMTGGHLRRQSQSF 166 (269)
T ss_pred HHHHHHHHHHHHhhCCCCCEEEECCchHHHHHH-HhcCcCCCeEEEeCCHHHHHHHH--hCCCCEEEEECCEEecCCCce
Confidence 345577888888888888999999999875533 33333323 44444433332221 12233333221 11
Q ss_pred -CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChH---HHH-HHHH-HcCcEEEEEcC
Q psy15447 195 -NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLK---DIL-SLRS-KYQARIFVDES 255 (457)
Q Consensus 195 -d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~---~i~-~l~~-~~g~~li~DEa 255 (457)
.+.. .+.++... ...+++-+.++....|...+-. ++. .+++ ....+|++|-.
T Consensus 167 ~G~~a-~~~l~~~~--------~d~afig~~gi~~~~G~t~~~~~ea~~kr~~i~~s~~~ill~D~s 224 (269)
T PRK09802 167 YGDQA-EQSLQNYH--------FDMLFLGVDAIDLERGVSTHNEDEARLNRRMCEVAERIIVVTDSS 224 (269)
T ss_pred ECHHH-HHHHHhcc--------CCEEEEcCceecCCCCcCCCCHHHHHHHHHHHHHcCcEEEEEecc
Confidence 1222 34444443 3456666667765566554411 222 2222 23568888864
No 466
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=20.45 E-value=2.1e+02 Score=27.25 Aligned_cols=36 Identities=6% Similarity=0.035 Sum_probs=22.6
Q ss_pred ccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcC
Q psy15447 217 TKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDES 255 (457)
Q Consensus 217 ~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa 255 (457)
-+.+|++..-+...| -.+.+.++|+++|+.++==.+
T Consensus 94 vk~~vIisaGf~e~g---~~~~~~~~ar~~girviGPNc 129 (300)
T PLN00125 94 LDLVVCITEGIPQHD---MVRVKAALNRQSKTRLIGPNC 129 (300)
T ss_pred CCEEEEECCCCCccc---HHHHHHHHHhhcCCEEECCCC
Confidence 345666666665554 235666779999998764333
No 467
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=20.21 E-value=8.6e+02 Score=24.15 Aligned_cols=135 Identities=11% Similarity=0.041 Sum_probs=69.9
Q ss_pred CcEEEecccHHHHHHHHHhhcCC-CCEEEEeCcccHHHHHHHHh--cCCeEEEecCCCHHHHHHHHHhhchhcccCCCCc
Q psy15447 141 EETALYSFGFSTSASAIAAYVKR-NDAVFVDENINFAIQTGLIA--SRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVT 217 (457)
Q Consensus 141 ~~~i~~~sG~~a~~~ai~a~~~~-gd~v~~~~~~h~~~~~~~~~--~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~ 217 (457)
.++++..+|.-+...|-...... +++.++++..-.. .+.... .+.+...++..|.+++.++|++..
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~-~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d---------- 70 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKC-ARIAELIGGKVEALQVDAADVDALVALIKDFD---------- 70 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHH-HHHHhhccccceeEEecccChHHHHHHHhcCC----------
Confidence 35677777876655555533332 5677777753222 111111 246677788889999999998642
Q ss_pred cEEEEEecCCCC---------CCC--------CCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCcc
Q psy15447 218 KKFIIVEGVYMN---------SAD--------ICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVD 280 (457)
Q Consensus 218 ~~~vi~e~v~~~---------~G~--------i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~D 280 (457)
.+|.+-|.+-. +|. ..+.-++.+.|++.|+..|.+.=..-|+..---..+..++.-....+|
T Consensus 71 -~VIn~~p~~~~~~i~ka~i~~gv~yvDts~~~~~~~~~~~~a~~Agit~v~~~G~dPGi~nv~a~~a~~~~~~~i~si~ 149 (389)
T COG1748 71 -LVINAAPPFVDLTILKACIKTGVDYVDTSYYEEPPWKLDEEAKKAGITAVLGCGFDPGITNVLAAYAAKELFDEIESID 149 (389)
T ss_pred -EEEEeCCchhhHHHHHHHHHhCCCEEEcccCCchhhhhhHHHHHcCeEEEcccCcCcchHHHHHHHHHHHhhccccEEE
Confidence 22222222111 111 011356788888888888887532222211000112223332346778
Q ss_pred EEEecCc
Q psy15447 281 MIIGSLE 287 (457)
Q Consensus 281 i~~~s~s 287 (457)
|+++.+.
T Consensus 150 iy~g~~g 156 (389)
T COG1748 150 IYVGGLG 156 (389)
T ss_pred EEEecCC
Confidence 8877653
No 468
>PF03851 UvdE: UV-endonuclease UvdE; InterPro: IPR004601 Schizosaccharomyces pombe ultraviolet damage endonuclease (UVDE or Uve1p) performs the initial step in an alternative excision repair pathway for UV-induced DNA damage. This DNA repair pathway was originally thought to be specific for UV damage, however Uve1p also recognises UV-induced bipyrimidine photoadducts and other non-UV-induced DNA adducts []. The Deinococcus radiodurans UVSE protein has also shown to be a UV DNA damage endonuclease that catalyzes repair of UV-induced DNA damage by a similar mechanism [].; GO: 0004519 endonuclease activity, 0006289 nucleotide-excision repair, 0009411 response to UV; PDB: 3BZG_A 3BZJ_A 3C0L_A 3C0S_A 3C0Q_A.
Probab=20.14 E-value=72 Score=29.88 Aligned_cols=33 Identities=18% Similarity=0.273 Sum_probs=22.1
Q ss_pred EEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCc
Q psy15447 220 FIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESV 256 (457)
Q Consensus 220 ~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~ 256 (457)
-+++| +......++++..+|++.|+.+++|-=|
T Consensus 180 rL~lE----NDd~~yt~~d~L~ic~~~giP~VfD~hH 212 (275)
T PF03851_consen 180 RLTLE----NDDKTYTVEDVLPICEKLGIPMVFDYHH 212 (275)
T ss_dssp TEEEE------SSS--HHHHHHHHHHHT--EEEEHHH
T ss_pred cEEEe----cCCCccCHHHHHHHHHHhCCCEEEEhHH
Confidence 56666 3445677999999999999999999644
No 469
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=20.01 E-value=1.5e+02 Score=27.72 Aligned_cols=61 Identities=13% Similarity=0.135 Sum_probs=37.3
Q ss_pred ecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcC--cEEEE-EcCcccccc
Q psy15447 191 FKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQ--ARIFV-DESVSFGTL 261 (457)
Q Consensus 191 ~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g--~~li~-DEa~~~g~~ 261 (457)
++.+|.+.+.+.++.... .....+++ +.++|.+..-.+|+++.++|. +.+++ +.|.|.|.+
T Consensus 72 I~i~dse~v~raI~~~~~-------~~~IdLii---~TpGG~v~AA~~I~~~l~~~~~~v~v~VP~~A~SAGTl 135 (285)
T PF01972_consen 72 IDIDDSEFVLRAIREAPK-------DKPIDLII---HTPGGLVDAAEQIARALREHPAKVTVIVPHYAMSAGTL 135 (285)
T ss_pred EcHhhHHHHHHHHHhcCC-------CCceEEEE---ECCCCcHHHHHHHHHHHHhCCCCEEEEECcccccHHHH
Confidence 334456666666655331 22223333 468899988899999998874 44444 557776653
Done!