Query psy15447
Match_columns 457
No_of_seqs 281 out of 3031
Neff 9.6
Searched_HMMs 29240
Date Fri Aug 16 21:19:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15447.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15447hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2w8t_A SPT, serine palmitoyltr 100.0 3.7E-50 1.3E-54 402.7 38.6 389 36-454 27-418 (427)
2 3tqx_A 2-amino-3-ketobutyrate 100.0 9.6E-47 3.3E-51 374.2 39.6 386 38-452 10-397 (399)
3 3kki_A CAI-1 autoinducer synth 100.0 1.2E-47 4E-52 382.4 30.7 358 68-451 46-404 (409)
4 1fc4_A 2-amino-3-ketobutyrate 100.0 3.6E-45 1.2E-49 363.4 38.2 370 63-452 27-398 (401)
5 1bs0_A Protein (8-amino-7-oxon 100.0 1E-44 3.5E-49 358.1 39.3 360 63-447 22-383 (384)
6 4ao9_A Beta-phenylalanine amin 100.0 2.7E-46 9.4E-51 371.6 26.1 384 29-452 37-447 (454)
7 3a2b_A Serine palmitoyltransfe 100.0 2.9E-44 9.9E-49 356.6 38.0 369 63-453 26-394 (398)
8 4atq_A 4-aminobutyrate transam 100.0 3.9E-44 1.3E-48 357.8 36.0 382 36-450 27-454 (456)
9 4e3q_A Pyruvate transaminase; 100.0 1E-43 3.4E-48 356.1 37.0 362 62-453 48-470 (473)
10 3hmu_A Aminotransferase, class 100.0 8.8E-43 3E-47 352.7 34.5 360 63-452 37-453 (472)
11 3i5t_A Aminotransferase; pyrid 100.0 1.4E-42 4.8E-47 351.7 34.7 360 63-453 36-456 (476)
12 2bwn_A 5-aminolevulinate synth 100.0 5.5E-42 1.9E-46 340.5 34.6 352 78-451 44-400 (401)
13 2oat_A Ornithine aminotransfer 100.0 7.2E-42 2.4E-46 343.4 35.3 345 63-450 58-438 (439)
14 1z7d_A Ornithine aminotransfer 100.0 7.1E-42 2.4E-46 342.9 35.1 348 63-452 47-430 (433)
15 3tfu_A Adenosylmethionine-8-am 100.0 4.5E-42 1.5E-46 346.2 33.1 352 62-452 53-454 (457)
16 3gju_A Putative aminotransfera 100.0 6.2E-41 2.1E-45 338.9 35.2 363 63-453 33-458 (460)
17 4a6r_A Omega transaminase; tra 100.0 8.4E-41 2.9E-45 337.8 33.9 375 49-453 16-451 (459)
18 3dod_A Adenosylmethionine-8-am 100.0 1.1E-40 3.9E-45 335.9 31.6 361 62-455 25-447 (448)
19 3dxv_A Alpha-amino-epsilon-cap 100.0 2.1E-40 7.3E-45 333.1 30.9 378 36-452 6-426 (439)
20 3n5m_A Adenosylmethionine-8-am 100.0 2.3E-39 7.7E-44 326.8 34.9 362 63-450 31-451 (452)
21 4ffc_A 4-aminobutyrate aminotr 100.0 1.7E-39 6E-44 327.3 34.0 384 36-453 27-451 (453)
22 3oks_A 4-aminobutyrate transam 100.0 2.8E-39 9.5E-44 325.8 34.0 378 36-450 24-450 (451)
23 3nx3_A Acoat, acetylornithine 100.0 2.2E-39 7.6E-44 321.1 31.4 344 63-450 18-394 (395)
24 3i4j_A Aminotransferase, class 100.0 2E-38 6.8E-43 317.9 35.6 366 63-451 11-428 (430)
25 3l44_A Glutamate-1-semialdehyd 100.0 7E-39 2.4E-43 321.6 31.4 382 36-453 8-432 (434)
26 2epj_A Glutamate-1-semialdehyd 100.0 7E-39 2.4E-43 321.6 31.2 381 36-452 12-432 (434)
27 2yky_A Beta-transaminase; tran 100.0 3.6E-43 1.2E-47 351.6 0.0 379 35-453 56-462 (465)
28 2pb2_A Acetylornithine/succiny 100.0 6.4E-39 2.2E-43 320.3 30.2 347 63-451 39-418 (420)
29 4e77_A Glutamate-1-semialdehyd 100.0 1.2E-38 4E-43 319.5 32.1 381 35-450 6-428 (429)
30 3k28_A Glutamate-1-semialdehyd 100.0 9.2E-39 3.1E-43 320.2 28.9 380 36-452 7-428 (429)
31 4a0g_A Adenosylmethionine-8-am 100.0 1.5E-40 5.1E-45 354.0 16.0 374 50-452 341-829 (831)
32 3a8u_X Omega-amino acid--pyruv 100.0 6.9E-38 2.4E-42 315.7 32.7 356 63-451 32-447 (449)
33 1ohv_A 4-aminobutyrate aminotr 100.0 7.1E-39 2.4E-43 324.2 24.1 355 63-451 45-471 (472)
34 2e7u_A Glutamate-1-semialdehyd 100.0 3.1E-38 1.1E-42 315.8 28.4 377 36-447 6-423 (424)
35 3fq8_A Glutamate-1-semialdehyd 100.0 6.2E-38 2.1E-42 314.0 30.0 380 36-450 6-426 (427)
36 3ruy_A Ornithine aminotransfer 100.0 9.9E-38 3.4E-42 308.9 31.1 339 63-448 18-391 (392)
37 1sff_A 4-aminobutyrate aminotr 100.0 1.7E-36 5.7E-41 303.4 34.7 361 63-453 23-426 (426)
38 2cy8_A D-phgat, D-phenylglycin 100.0 4.2E-37 1.4E-41 310.3 29.6 378 35-452 13-436 (453)
39 1zod_A DGD, 2,2-dialkylglycine 100.0 1.5E-36 5E-41 304.5 33.3 362 63-451 25-432 (433)
40 1s0a_A Adenosylmethionine-8-am 100.0 4.6E-36 1.6E-40 300.6 35.6 349 64-451 25-424 (429)
41 2ord_A Acoat, acetylornithine 100.0 7.3E-37 2.5E-41 303.2 29.4 344 62-450 21-396 (397)
42 2cjg_A L-lysine-epsilon aminot 100.0 3.8E-37 1.3E-41 310.0 27.6 344 67-451 39-448 (449)
43 4adb_A Succinylornithine trans 100.0 1.1E-36 3.7E-41 302.8 29.8 348 63-453 21-402 (406)
44 3nra_A Aspartate aminotransfer 100.0 6.3E-37 2.2E-41 304.5 26.6 357 66-452 21-406 (407)
45 2eo5_A 419AA long hypothetical 100.0 5.9E-36 2E-40 298.9 32.9 343 63-451 24-418 (419)
46 3l8a_A METC, putative aminotra 100.0 3.4E-35 1.2E-39 293.5 31.6 353 63-449 41-420 (421)
47 3dzz_A Putative pyridoxal 5'-p 100.0 4.6E-35 1.6E-39 289.4 31.3 357 65-452 11-390 (391)
48 1vef_A Acetylornithine/acetyl- 100.0 5.2E-35 1.8E-39 289.7 30.5 339 63-448 27-394 (395)
49 3kax_A Aminotransferase, class 100.0 1.9E-33 6.5E-38 277.0 33.5 351 64-448 6-382 (383)
50 2eh6_A Acoat, acetylornithine 100.0 8.5E-34 2.9E-38 278.9 29.3 334 63-447 10-374 (375)
51 3fdb_A Beta C-S lyase, putativ 100.0 5.7E-34 2E-38 280.2 26.7 350 66-450 8-375 (377)
52 3ly1_A Putative histidinol-pho 100.0 6.7E-33 2.3E-37 270.3 33.5 333 71-450 6-351 (354)
53 4dq6_A Putative pyridoxal phos 100.0 1.7E-33 5.8E-38 278.1 28.0 349 65-448 11-390 (391)
54 2dou_A Probable N-succinyldiam 100.0 8.2E-33 2.8E-37 272.0 30.7 332 78-448 23-375 (376)
55 1j32_A Aspartate aminotransfer 100.0 1.8E-32 6.2E-37 270.7 31.6 338 78-451 28-387 (388)
56 1t3i_A Probable cysteine desul 100.0 3.3E-32 1.1E-36 271.3 33.2 345 77-454 24-416 (420)
57 2zc0_A Alanine glyoxylate tran 100.0 5.3E-32 1.8E-36 269.0 34.3 349 79-452 33-405 (407)
58 1c7n_A Cystalysin; transferase 100.0 1.3E-32 4.3E-37 272.8 29.1 355 66-453 9-395 (399)
59 1d2f_A MALY protein; aminotran 100.0 1.2E-31 4.2E-36 265.0 35.4 352 66-451 8-389 (390)
60 1kmj_A Selenocysteine lyase; p 100.0 5.2E-32 1.8E-36 268.6 32.6 341 78-451 20-405 (406)
61 2z61_A Probable aspartate amin 100.0 4.8E-32 1.7E-36 265.9 31.9 329 78-449 27-369 (370)
62 3dyd_A Tyrosine aminotransfera 100.0 1.2E-31 4.1E-36 268.3 34.1 342 78-453 52-426 (427)
63 3ffh_A Histidinol-phosphate am 100.0 1.4E-31 4.6E-36 262.0 33.8 320 79-447 31-362 (363)
64 3aow_A Putative uncharacterize 100.0 6.5E-32 2.2E-36 271.7 31.8 349 79-452 75-446 (448)
65 3hdo_A Histidinol-phosphate am 100.0 3.8E-32 1.3E-36 265.7 28.6 325 78-449 24-353 (360)
66 1gd9_A Aspartate aminotransfer 100.0 1.4E-31 4.9E-36 264.3 32.7 338 80-452 26-387 (389)
67 1o4s_A Aspartate aminotransfer 100.0 1.1E-31 3.7E-36 265.3 31.2 331 78-449 39-387 (389)
68 3h14_A Aminotransferase, class 100.0 1.3E-31 4.6E-36 264.8 31.4 335 78-452 29-383 (391)
69 1yiz_A Kynurenine aminotransfe 100.0 2.7E-31 9.4E-36 265.8 34.0 347 80-448 37-426 (429)
70 3g0t_A Putative aminotransfera 100.0 2.5E-31 8.4E-36 266.8 33.1 335 78-450 42-436 (437)
71 1v2d_A Glutamine aminotransfer 100.0 9.5E-32 3.3E-36 264.9 28.5 330 81-454 26-374 (381)
72 1xi9_A Putative transaminase; 100.0 3.2E-31 1.1E-35 263.4 32.2 339 78-452 36-404 (406)
73 2gb3_A Aspartate aminotransfer 100.0 2.5E-31 8.5E-36 264.5 31.1 339 78-453 41-404 (409)
74 2dr1_A PH1308 protein, 386AA l 100.0 7.3E-31 2.5E-35 258.7 33.0 315 96-452 32-380 (386)
75 1vp4_A Aminotransferase, putat 100.0 2E-31 6.8E-36 266.6 29.2 353 79-453 42-420 (425)
76 2o1b_A Aminotransferase, class 100.0 1.3E-31 4.3E-36 266.2 27.1 335 78-450 45-402 (404)
77 2x5d_A Probable aminotransfera 100.0 8.5E-31 2.9E-35 260.9 33.0 340 78-452 35-399 (412)
78 3lws_A Aromatic amino acid bet 100.0 2.6E-32 9E-37 266.4 21.6 335 80-448 3-356 (357)
79 3get_A Histidinol-phosphate am 100.0 3.9E-31 1.3E-35 258.9 30.0 321 79-448 29-364 (365)
80 3cq5_A Histidinol-phosphate am 100.0 3.5E-30 1.2E-34 252.6 36.3 317 83-449 33-366 (369)
81 1eg5_A Aminotransferase; PLP-d 100.0 1E-30 3.5E-35 257.3 32.4 338 81-454 3-379 (384)
82 3piu_A 1-aminocyclopropane-1-c 100.0 4.2E-31 1.4E-35 265.0 30.1 308 127-453 88-434 (435)
83 3ftb_A Histidinol-phosphate am 100.0 1.2E-30 4E-35 255.0 32.2 334 66-450 10-360 (361)
84 3jtx_A Aminotransferase; NP_28 100.0 1E-30 3.6E-35 258.7 31.9 346 69-448 18-395 (396)
85 3qgu_A LL-diaminopimelate amin 100.0 8.8E-32 3E-36 271.1 24.6 342 77-451 66-440 (449)
86 3euc_A Histidinol-phosphate am 100.0 6.3E-31 2.2E-35 257.6 29.4 321 79-448 29-365 (367)
87 2zyj_A Alpha-aminodipate amino 100.0 2.9E-31 9.9E-36 262.9 27.1 343 79-452 31-394 (397)
88 3fvs_A Kynurenine--oxoglutarat 100.0 1E-30 3.4E-35 261.1 30.6 350 79-450 27-421 (422)
89 3op7_A Aminotransferase class 100.0 3.4E-31 1.2E-35 260.3 26.6 328 81-453 28-373 (375)
90 1u08_A Hypothetical aminotrans 100.0 1.6E-30 5.6E-35 256.5 31.5 334 80-446 30-385 (386)
91 3ele_A Amino transferase; RER0 100.0 1.1E-30 3.7E-35 258.8 30.1 334 79-452 34-397 (398)
92 1bw0_A TAT, protein (tyrosine 100.0 1.5E-30 5E-35 259.5 30.8 340 80-453 33-415 (416)
93 1lc5_A COBD, L-threonine-O-3-p 100.0 2.7E-30 9.3E-35 252.9 32.1 328 78-452 22-361 (364)
94 3ezs_A Aminotransferase ASPB; 100.0 7.5E-31 2.6E-35 257.9 28.3 333 78-450 22-374 (376)
95 2o0r_A RV0858C (N-succinyldiam 100.0 2E-30 7E-35 258.1 31.1 339 81-453 26-398 (411)
96 1b5p_A Protein (aspartate amin 100.0 4.2E-30 1.4E-34 253.6 33.0 332 79-449 30-383 (385)
97 3b46_A Aminotransferase BNA3; 100.0 9.2E-31 3.2E-35 263.4 28.5 346 78-447 55-443 (447)
98 3ei9_A LL-diaminopimelate amin 100.0 4.9E-31 1.7E-35 264.2 26.2 338 77-448 53-425 (432)
99 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 1.5E-31 5.1E-36 262.3 20.9 325 95-451 21-370 (371)
100 3cai_A Possible aminotransfera 100.0 1.9E-30 6.7E-35 257.6 28.8 332 79-446 26-404 (406)
101 4hvk_A Probable cysteine desul 100.0 3.6E-30 1.2E-34 253.0 28.9 334 82-453 3-375 (382)
102 1m32_A 2-aminoethylphosphonate 100.0 2.1E-30 7.1E-35 253.3 26.6 324 81-450 4-364 (366)
103 3lvm_A Cysteine desulfurase; s 100.0 2.2E-30 7.7E-35 258.6 27.2 337 80-453 23-401 (423)
104 1vjo_A Alanine--glyoxylate ami 100.0 4.4E-30 1.5E-34 253.9 28.7 323 79-448 33-392 (393)
105 3f9t_A TDC, L-tyrosine decarbo 100.0 2.8E-30 9.5E-35 255.1 27.2 317 95-449 42-396 (397)
106 1elu_A L-cysteine/L-cystine C- 100.0 4.7E-30 1.6E-34 253.3 28.0 312 96-447 29-388 (390)
107 3e2y_A Kynurenine-oxoglutarate 100.0 1E-29 3.6E-34 252.7 29.9 345 79-446 22-408 (410)
108 3fkd_A L-threonine-O-3-phospha 100.0 3.9E-29 1.3E-33 243.3 33.2 330 69-450 3-341 (350)
109 4eb5_A Probable cysteine desul 100.0 5.4E-30 1.8E-34 252.1 27.4 333 82-452 3-374 (382)
110 3t18_A Aminotransferase class 100.0 6.5E-30 2.2E-34 254.5 28.3 337 79-452 36-411 (413)
111 3nnk_A Ureidoglycine-glyoxylat 100.0 2.3E-29 7.8E-34 250.2 31.8 316 96-454 25-393 (411)
112 2x5f_A Aspartate_tyrosine_phen 100.0 4E-30 1.4E-34 257.5 25.4 340 80-451 47-429 (430)
113 1jg8_A L-ALLO-threonine aldola 100.0 5.5E-30 1.9E-34 248.9 25.5 329 80-451 3-346 (347)
114 3isl_A Purine catabolism prote 100.0 2.7E-29 9.1E-34 250.1 30.9 318 98-454 21-393 (416)
115 3rq1_A Aminotransferase class 100.0 1.7E-29 6E-34 251.9 29.2 338 79-452 37-416 (418)
116 3zrp_A Serine-pyruvate aminotr 100.0 3.2E-29 1.1E-33 246.7 30.7 312 96-454 14-366 (384)
117 3kgw_A Alanine-glyoxylate amin 100.0 5.6E-29 1.9E-33 245.6 31.0 317 95-454 34-391 (393)
118 2z9v_A Aspartate aminotransfer 100.0 4.3E-29 1.5E-33 246.6 30.2 329 80-454 9-374 (392)
119 2vi8_A Serine hydroxymethyltra 100.0 5.7E-30 2E-34 254.1 23.8 338 80-452 24-388 (405)
120 3b1d_A Betac-S lyase; HET: PLP 99.9 3E-33 1E-37 276.8 0.0 348 65-449 13-391 (392)
121 2huf_A Alanine glyoxylate amin 100.0 6.5E-29 2.2E-33 245.4 30.0 331 78-455 17-387 (393)
122 1qz9_A Kynureninase; kynurenin 100.0 2.8E-29 9.4E-34 250.1 27.1 328 78-452 27-403 (416)
123 1iay_A ACC synthase 2, 1-amino 100.0 2.7E-28 9.1E-33 244.1 33.5 305 128-451 86-427 (428)
124 3p1t_A Putative histidinol-pho 100.0 3E-28 1E-32 235.6 32.1 310 78-448 14-334 (337)
125 2rfv_A Methionine gamma-lyase; 100.0 1.9E-28 6.4E-33 242.8 30.8 293 123-447 62-396 (398)
126 1iug_A Putative aspartate amin 100.0 1.2E-28 4.2E-33 239.6 28.2 310 95-452 12-349 (352)
127 2r2n_A Kynurenine/alpha-aminoa 100.0 5.1E-28 1.7E-32 241.8 33.3 316 121-451 78-424 (425)
128 1v72_A Aldolase; PLP-dependent 100.0 5.3E-29 1.8E-33 242.6 25.2 330 80-451 7-353 (356)
129 3asa_A LL-diaminopimelate amin 100.0 1E-28 3.6E-33 244.8 27.4 340 79-451 32-393 (400)
130 3tcm_A Alanine aminotransferas 100.0 1.1E-27 3.6E-32 244.1 34.4 343 96-453 108-496 (500)
131 3gbx_A Serine hydroxymethyltra 100.0 1.2E-28 4.2E-33 245.6 26.7 330 95-452 42-397 (420)
132 2dkj_A Serine hydroxymethyltra 100.0 8E-29 2.7E-33 246.0 24.8 336 80-450 23-387 (407)
133 2yrr_A Aminotransferase, class 100.0 1.2E-28 4.1E-33 239.6 24.5 311 95-450 11-352 (353)
134 1ax4_A Tryptophanase; tryptoph 100.0 6.4E-28 2.2E-32 244.0 30.8 343 78-452 41-442 (467)
135 1fg7_A Histidinol phosphate am 100.0 1.3E-27 4.6E-32 233.1 31.8 278 127-447 60-354 (356)
136 3ecd_A Serine hydroxymethyltra 100.0 1.3E-27 4.3E-32 238.7 32.1 339 81-451 33-397 (425)
137 3vax_A Putative uncharacterize 100.0 3.7E-29 1.3E-33 247.8 20.4 335 78-450 19-399 (400)
138 3f0h_A Aminotransferase; RER07 100.0 5.3E-28 1.8E-32 237.5 28.5 311 96-450 31-373 (376)
139 3e9k_A Kynureninase; kynurenin 100.0 2.3E-28 8E-33 247.2 25.1 336 79-451 65-461 (465)
140 1gc0_A Methionine gamma-lyase; 100.0 3.1E-27 1E-31 234.1 31.4 291 123-447 63-397 (398)
141 1svv_A Threonine aldolase; str 100.0 4.5E-28 1.5E-32 236.2 24.1 328 81-451 14-358 (359)
142 1e5e_A MGL, methionine gamma-l 100.0 1.5E-26 5.1E-31 229.4 35.4 292 124-453 61-397 (404)
143 1b9h_A AHBA synthase, protein 100.0 3.3E-27 1.1E-31 232.9 30.4 315 96-450 16-387 (388)
144 2oga_A Transaminase; PLP-depen 100.0 9.2E-28 3.1E-32 238.0 26.4 326 80-453 30-398 (399)
145 1cs1_A CGS, protein (cystathio 100.0 9.6E-27 3.3E-31 229.6 33.6 287 123-447 50-383 (386)
146 3qhx_A Cystathionine gamma-syn 100.0 6.3E-27 2.2E-31 231.2 31.9 287 123-444 64-391 (392)
147 1qgn_A Protein (cystathionine 100.0 1.1E-26 3.6E-31 232.0 33.5 290 123-450 112-444 (445)
148 3mad_A Sphingosine-1-phosphate 100.0 1.3E-27 4.5E-32 244.6 27.3 338 83-452 94-470 (514)
149 3n0l_A Serine hydroxymethyltra 100.0 5.1E-27 1.7E-31 233.7 30.6 338 81-452 26-390 (417)
150 3h7f_A Serine hydroxymethyltra 100.0 2E-27 6.9E-32 238.9 27.6 343 81-452 46-415 (447)
151 3ihj_A Alanine aminotransferas 100.0 1.5E-26 5.2E-31 235.3 33.5 341 97-453 104-495 (498)
152 3if2_A Aminotransferase; YP_26 100.0 1E-27 3.5E-32 240.9 24.4 347 80-453 31-442 (444)
153 2ch1_A 3-hydroxykynurenine tra 100.0 1E-26 3.4E-31 230.0 31.2 294 125-453 51-385 (396)
154 2bkw_A Alanine-glyoxylate amin 100.0 8.7E-27 3E-31 229.4 29.5 288 126-450 39-383 (385)
155 2ay1_A Aroat, aromatic amino a 100.0 2.9E-28 1E-32 241.0 18.5 328 79-447 25-392 (394)
156 3ez1_A Aminotransferase MOCR f 100.0 3.6E-27 1.2E-31 235.5 26.3 346 82-452 27-416 (423)
157 2c81_A Glutamine-2-deoxy-scyll 100.0 4.1E-26 1.4E-30 227.5 33.6 318 96-451 15-414 (418)
158 1uu1_A Histidinol-phosphate am 100.0 5.5E-27 1.9E-31 226.8 26.0 303 80-447 19-334 (335)
159 3uwc_A Nucleotide-sugar aminot 100.0 8.3E-27 2.8E-31 228.8 27.3 306 99-451 21-371 (374)
160 2ez2_A Beta-tyrosinase, tyrosi 100.0 2.4E-26 8.3E-31 231.7 31.4 343 78-452 40-432 (456)
161 1mdo_A ARNB aminotransferase; 100.0 2.6E-26 8.7E-31 226.9 30.8 319 82-451 10-386 (393)
162 3ffr_A Phosphoserine aminotran 100.0 3.9E-26 1.3E-30 222.7 31.6 309 96-448 16-361 (362)
163 3frk_A QDTB; aminotransferase, 100.0 5.8E-27 2E-31 230.0 25.7 306 97-450 17-367 (373)
164 3ndn_A O-succinylhomoserine su 100.0 1.9E-26 6.3E-31 229.0 29.4 291 123-448 79-413 (414)
165 1pff_A Methionine gamma-lyase; 100.0 2.2E-26 7.4E-31 222.1 29.1 284 129-447 2-330 (331)
166 2a7v_A Serine hydroxymethyltra 100.0 2.9E-27 1E-31 237.8 23.8 336 82-451 56-441 (490)
167 2fnu_A Aminotransferase; prote 100.0 3.2E-26 1.1E-30 224.6 30.6 316 95-452 11-373 (375)
168 3ppl_A Aspartate aminotransfer 100.0 3.4E-27 1.2E-31 236.0 23.3 308 124-452 77-421 (427)
169 1ajs_A Aspartate aminotransfer 100.0 3E-27 1E-31 235.1 22.6 331 78-451 28-411 (412)
170 3mc6_A Sphingosine-1-phosphate 100.0 1.2E-26 3.9E-31 236.7 27.4 338 86-453 65-439 (497)
171 2q7w_A Aspartate aminotransfer 100.0 3E-27 1E-31 233.9 22.2 327 78-447 24-395 (396)
172 3d6k_A Putative aminotransfera 100.0 6.9E-27 2.4E-31 233.4 24.6 346 82-453 34-420 (422)
173 3ke3_A Putative serine-pyruvat 100.0 1.7E-26 5.8E-31 227.2 26.5 296 124-452 34-377 (379)
174 4f4e_A Aromatic-amino-acid ami 100.0 1.3E-26 4.3E-31 231.4 25.4 332 79-448 48-419 (420)
175 3acz_A Methionine gamma-lyase; 100.0 1.4E-25 4.8E-30 221.4 32.4 287 123-445 57-387 (389)
176 3g7q_A Valine-pyruvate aminotr 100.0 2.1E-26 7.3E-31 229.3 26.4 340 79-452 30-414 (417)
177 3hbx_A GAD 1, glutamate decarb 100.0 1.6E-26 5.4E-31 235.4 25.7 345 78-453 53-446 (502)
178 4eu1_A Mitochondrial aspartate 100.0 8.9E-27 3.1E-31 231.6 23.3 324 80-448 41-408 (409)
179 2oqx_A Tryptophanase; lyase, p 100.0 2.1E-26 7.1E-31 232.9 26.4 346 78-452 39-443 (467)
180 2fq6_A Cystathionine beta-lyas 99.9 3.9E-26 1.3E-30 226.5 27.4 289 123-446 80-413 (415)
181 1yaa_A Aspartate aminotransfer 99.9 1E-26 3.6E-31 231.3 23.4 331 78-450 27-410 (412)
182 2po3_A 4-dehydrase; external a 99.9 2.3E-25 8E-30 222.4 32.7 323 84-452 20-387 (424)
183 3dr4_A Putative perosamine syn 99.9 5.5E-26 1.9E-30 224.5 27.7 309 96-448 35-390 (391)
184 2cb1_A O-acetyl homoserine sul 99.9 3.4E-25 1.2E-29 220.3 32.9 285 123-446 54-411 (412)
185 3ri6_A O-acetylhomoserine sulf 99.9 8.8E-26 3E-30 224.7 28.1 287 123-448 80-429 (430)
186 3a9z_A Selenocysteine lyase; P 99.9 2.9E-26 9.8E-31 229.5 24.4 340 78-454 17-431 (432)
187 3fsl_A Aromatic-amino-acid ami 99.9 1.7E-26 5.7E-31 228.6 22.1 330 80-447 26-396 (397)
188 3pj0_A LMO0305 protein; struct 99.9 2.4E-26 8.1E-31 224.3 22.5 313 96-447 28-358 (359)
189 1n8p_A Cystathionine gamma-lya 99.9 1.2E-25 4.1E-30 222.0 27.6 288 123-447 53-391 (393)
190 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 4.1E-25 1.4E-29 221.5 31.5 323 78-449 29-434 (437)
191 3nyt_A Aminotransferase WBPE; 99.9 9.2E-26 3.2E-30 221.0 25.8 303 97-447 16-360 (367)
192 2qma_A Diaminobutyrate-pyruvat 99.9 1.4E-25 4.8E-30 228.6 27.9 348 82-451 95-496 (497)
193 1o69_A Aminotransferase; struc 99.9 1.3E-24 4.4E-29 214.9 33.6 321 96-449 11-385 (394)
194 2aeu_A Hypothetical protein MJ 99.9 9.1E-26 3.1E-30 221.5 24.7 328 79-453 26-373 (374)
195 1rv3_A Serine hydroxymethyltra 99.9 7.5E-26 2.6E-30 229.4 24.3 332 81-450 45-430 (483)
196 3nmy_A Xometc, cystathionine g 99.9 3.1E-25 1.1E-29 219.1 27.6 287 123-445 65-397 (400)
197 7aat_A Aspartate aminotransfer 99.9 7.8E-26 2.7E-30 224.1 23.3 329 81-448 29-400 (401)
198 1wyu_B Glycine dehydrogenase s 99.9 1.8E-25 6.2E-30 226.3 26.1 318 96-450 79-440 (474)
199 3cog_A Cystathionine gamma-lya 99.9 6.6E-25 2.3E-29 217.4 29.4 289 124-448 66-399 (403)
200 1w23_A Phosphoserine aminotran 99.9 4.9E-26 1.7E-30 222.1 20.6 321 80-450 2-359 (360)
201 3f6t_A Aspartate aminotransfer 99.9 1.4E-25 4.7E-30 230.0 24.6 338 81-452 104-526 (533)
202 3meb_A Aspartate aminotransfer 99.9 1.8E-25 6.1E-30 224.8 24.1 333 78-452 46-445 (448)
203 2ctz_A O-acetyl-L-homoserine s 99.9 5.7E-25 2E-29 219.2 27.3 289 123-448 56-420 (421)
204 3b8x_A WBDK, pyridoxamine 5-ph 99.9 4.7E-24 1.6E-28 210.6 33.2 305 96-444 14-389 (390)
205 3vp6_A Glutamate decarboxylase 99.9 2.5E-24 8.7E-29 219.5 31.5 312 123-451 133-505 (511)
206 2c0r_A PSAT, phosphoserine ami 99.9 3.3E-25 1.1E-29 216.5 24.0 307 95-451 15-361 (362)
207 2dgk_A GAD-beta, GADB, glutama 99.9 2E-24 6.9E-29 217.4 28.4 329 95-452 54-435 (452)
208 1ibj_A CBL, cystathionine beta 99.9 1.5E-24 5E-29 218.1 25.4 289 124-450 132-461 (464)
209 4e1o_A HDC, histidine decarbox 99.9 1.3E-23 4.4E-28 212.9 32.1 305 123-452 116-479 (481)
210 3jzl_A Putative cystathionine 99.9 1.7E-24 5.7E-29 213.8 24.7 250 126-410 60-348 (409)
211 3i16_A Aluminum resistance pro 99.9 3.5E-24 1.2E-28 212.2 25.3 255 126-413 74-368 (427)
212 3ju7_A Putative PLP-dependent 99.9 1.9E-23 6.3E-28 205.1 29.3 319 92-450 11-374 (377)
213 3k40_A Aromatic-L-amino-acid d 99.9 2.8E-23 9.4E-28 210.0 31.1 304 124-453 112-473 (475)
214 2okj_A Glutamate decarboxylase 99.9 3.3E-23 1.1E-27 211.4 31.9 311 124-451 131-502 (504)
215 3hvy_A Cystathionine beta-lyas 99.9 6E-24 2E-28 210.5 25.4 245 126-403 75-355 (427)
216 1c4k_A Protein (ornithine deca 99.9 1.3E-23 4.6E-28 220.3 26.4 316 122-452 170-567 (730)
217 2jis_A Cysteine sulfinic acid 99.9 2.5E-22 8.4E-27 205.4 33.8 313 122-450 145-514 (515)
218 3n75_A LDC, lysine decarboxyla 99.9 2.3E-23 7.9E-28 216.7 26.3 306 124-450 194-559 (715)
219 1js3_A DDC;, DOPA decarboxylas 99.9 9.4E-22 3.2E-26 199.8 33.9 305 124-454 112-477 (486)
220 2x3l_A ORN/Lys/Arg decarboxyla 99.9 2.7E-23 9.2E-28 208.5 21.9 281 123-451 55-353 (446)
221 3k7y_A Aspartate aminotransfer 99.9 7.1E-23 2.4E-27 202.3 23.3 329 80-450 29-404 (405)
222 3bwn_A AT1G70560, L-tryptophan 99.9 4.8E-24 1.7E-28 210.5 14.4 274 128-450 71-386 (391)
223 2fyf_A PSAT, phosphoserine ami 99.9 5.3E-23 1.8E-27 203.6 21.9 285 124-450 77-397 (398)
224 2vyc_A Biodegradative arginine 99.9 1.5E-22 5.2E-27 214.2 26.1 313 124-451 204-605 (755)
225 3ht4_A Aluminum resistance pro 99.9 5.1E-23 1.8E-27 204.8 20.3 254 124-412 64-356 (431)
226 2z67_A O-phosphoseryl-tRNA(SEC 99.9 5.3E-22 1.8E-26 199.8 26.3 294 124-448 132-455 (456)
227 2zy4_A L-aspartate beta-decarb 99.9 4.1E-21 1.4E-25 196.9 27.7 337 82-452 106-523 (546)
228 1wyu_A Glycine dehydrogenase ( 99.9 9.7E-21 3.3E-25 189.7 27.1 322 82-448 65-437 (438)
229 2hox_A ALLIIN lyase 1; cystein 99.9 2.9E-21 9.9E-26 192.7 20.7 322 78-449 54-423 (427)
230 4h51_A Aspartate aminotransfer 99.9 2.8E-20 9.5E-25 183.9 23.6 338 78-453 42-419 (420)
231 3e77_A Phosphoserine aminotran 99.9 9.3E-21 3.2E-25 184.2 19.3 315 95-450 24-374 (377)
232 3m5u_A Phosphoserine aminotran 99.8 3.7E-19 1.3E-23 172.4 26.1 303 96-450 17-359 (361)
233 3qm2_A Phosphoserine aminotran 99.8 6E-20 2.1E-24 179.5 15.2 307 96-450 39-384 (386)
234 3ou5_A Serine hydroxymethyltra 99.8 2.9E-18 1E-22 165.4 24.7 326 96-449 67-439 (490)
235 3hl2_A O-phosphoseryl-tRNA(SEC 99.8 1.3E-16 4.5E-21 154.6 24.8 300 138-454 129-464 (501)
236 3bc8_A O-phosphoseryl-tRNA(SEC 99.8 5.2E-16 1.8E-20 152.5 27.8 309 125-453 98-445 (450)
237 1tks_A 3,4-dihydroxy-2-butanon 52.3 13 0.00044 31.7 3.9 37 216-252 158-194 (204)
238 2gjh_A Designed protein; oblig 48.1 41 0.0014 21.0 4.6 30 422-452 2-31 (62)
239 3mio_A DHBP synthase, 3,4-dihy 46.5 25 0.00087 30.0 4.8 37 216-252 157-194 (206)
240 1g57_A DHBP synthase, 3,4-dihy 42.2 31 0.0011 29.7 4.8 36 216-252 166-201 (217)
241 1gcy_A Glucan 1,4-alpha-maltot 41.5 28 0.00096 34.6 5.2 26 231-256 90-115 (527)
242 1snn_A DHBP synthase, 3,4-dihy 37.4 31 0.0011 29.8 4.1 36 216-252 177-212 (227)
243 1qys_A TOP7; alpha-beta, novel 37.0 1E+02 0.0035 21.3 6.8 30 422-452 46-75 (106)
244 3edf_A FSPCMD, cyclomaltodextr 33.8 31 0.001 35.0 4.1 26 231-256 196-221 (601)
245 1vhx_A Putative holliday junct 30.2 1.1E+02 0.0038 24.4 6.1 54 194-257 42-101 (150)
246 3ghf_A Septum site-determining 29.1 1.7E+02 0.006 22.3 6.8 59 186-251 17-78 (120)
247 2dh2_A 4F2 cell-surface antige 28.3 36 0.0012 32.7 3.4 27 231-257 79-105 (424)
248 1vb5_A Translation initiation 27.5 3.3E+02 0.011 24.2 10.8 120 127-259 96-224 (276)
249 1uta_A FTSN, MSGA, cell divisi 26.6 1.2E+02 0.0041 21.0 5.2 47 392-446 22-68 (81)
250 3nvt_A 3-deoxy-D-arabino-heptu 25.1 3.4E+02 0.012 25.5 9.4 89 165-259 227-323 (385)
251 1k4i_A 3,4-dihydroxy-2-butanon 24.6 69 0.0023 27.8 4.0 36 216-252 166-212 (233)
252 1nxi_A Conserved hypothetical 23.5 2.6E+02 0.0089 21.7 7.6 60 392-453 52-113 (132)
253 1x60_A Sporulation-specific N- 23.2 1.8E+02 0.0061 19.8 5.6 47 392-446 22-68 (79)
254 4aee_A Alpha amylase, catalyti 23.1 39 0.0013 34.9 2.7 55 195-256 263-334 (696)
255 3bzy_B ESCU; auto cleavage pro 23.0 42 0.0014 24.0 2.0 20 236-255 29-48 (83)
256 3twe_A Alpha4H; unknown functi 22.3 54 0.0018 17.0 1.7 14 340-353 12-25 (27)
257 4gqr_A Pancreatic alpha-amylas 21.6 40 0.0014 32.7 2.3 26 231-256 74-99 (496)
258 3ecs_A Translation initiation 20.9 4.7E+02 0.016 23.7 10.2 113 128-253 109-229 (315)
259 3vup_A Beta-1,4-mannanase; TIM 20.9 56 0.0019 29.4 3.1 21 235-255 91-111 (351)
No 1
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=3.7e-50 Score=402.70 Aligned_cols=389 Identities=23% Similarity=0.385 Sum_probs=334.4
Q ss_pred hhhHHHHHcccCCCC-CCCccccccccCCceeee-cCCCcEEEECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCC
Q psy15447 36 TINVDALINNWTPEP-IVSKAEKFKDVSSKYVVD-QKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVG 113 (457)
Q Consensus 36 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~-~~~g~~~~~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~ 113 (457)
++++.+.+++..+.+ .+. .+..+. +++|+++++||+++|||++++|+|+..+|++.+++.+++.+++.+
T Consensus 27 ~~~~~~~~~~~~~~g~~~r---------~~~~~~~~~~g~~~~~~g~~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~~ 97 (427)
T 2w8t_A 27 FDGLIAERQKLLDSGVTDP---------FAIVMEQVKSPTEAVIRGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSG 97 (427)
T ss_dssp GHHHHHHHHHHHHTTCCCT---------TCCCCSEEEETTEEEETTEEEEECSCCCTTCGGGCHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHHcCCcce---------eeeeccccCCCceEeeCCceEEEEECcccccCCCCHHHHHHHHHHHHHhCCC
Confidence 345555566666665 433 245677 999999999999999999999889877999999999999998877
Q ss_pred CCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC
Q psy15447 114 SCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH 193 (457)
Q Consensus 114 ~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~ 193 (457)
+++++..+|..+.+.+|+++|++++|.+.+++++||++|+..++++++++||.|+++.++|.++..+++..|.+++.+++
T Consensus 98 ~~~~~~~~G~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~ 177 (427)
T 2w8t_A 98 TCGSRMLNGTFHDHMEVEQALRDFYGTTGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH 177 (427)
T ss_dssp CCSCTTTTCCCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT
T ss_pred CcccccccCCcHHHHHHHHHHHHHhCCCceEEecCcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC
Confidence 77778888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccC
Q psy15447 194 NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFG 273 (457)
Q Consensus 194 ~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~ 273 (457)
+|+++|++.+++.. +.++++|++++++|++|.+.|+++|+++|++||++||+||+|+.|.++++|.++.++++
T Consensus 178 ~d~~~le~~l~~~~-------~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~ 250 (427)
T 2w8t_A 178 NSVEDLDKRLGRLP-------KEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQG 250 (427)
T ss_dssp TCHHHHHHHHHTSC-------SSSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTT
T ss_pred CCHHHHHHHHHhcc-------CCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcC
Confidence 99999999997632 12578999999999999999999999999999999999999999988887888877788
Q ss_pred CCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447 274 VSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 274 ~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~ 353 (457)
+.+ ++|++++|+||++|+.|||+++++++++.+......+.++++.++..++++.++++.+++.++++++++++.+++.
T Consensus 251 ~~~-~~di~~~s~sK~~g~~gG~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~ 329 (427)
T 2w8t_A 251 LEG-QIDFVVGTFSKSVGTVGGFVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALH 329 (427)
T ss_dssp CTT-CCSEEEEESSSTTCSCCEEEEECCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred CCc-CCcEEEecchhhhccCCCEEEeCHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 864 6799999999999999999999999888876654456667778999999999999988755678999999999999
Q ss_pred HHhhcccccCCeEEeccC-CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCC
Q psy15447 354 SLLSQHKVTQRFLVQGHR-DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISH 432 (457)
Q Consensus 354 ~~L~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~ 432 (457)
+.|++ .|+++..++ .++++++.+++.. ...++.+.|+++||++.++.+|.. +.+.+++|++++..+
T Consensus 330 ~~L~~----~g~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L~~~Gi~v~~~~~~~~--~~~~~~lRi~~~~~~ 396 (427)
T 2w8t_A 330 GGLKA----MGFRLGTETCDSAIVAVMLEDQE-------QAAMMWQALLDGGLYVNMARPPAT--PAGTFLLRCSICAEH 396 (427)
T ss_dssp HHHHH----HTCEESCSSCCSSEEEEEESSHH-------HHHHHHHHHHHTTEECEEECTTTS--CTTCEEEEEECCTTC
T ss_pred HHHHH----cCCcccCCCCCCCEEEEEECCHH-------HHHHHHHHHHHCCeEEeeeCCCCC--CCCCeEEEEEeCCCC
Confidence 99998 377775344 6788888886533 567899999999999998776543 233578999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhcCC
Q psy15447 433 TEQDMNSLIETLCKSHDIAVQP 454 (457)
Q Consensus 433 t~edi~~~~~~l~~~~~~~~~~ 454 (457)
|++|+++++++|+++++++...
T Consensus 397 t~e~i~~~~~~l~~~l~~~~~~ 418 (427)
T 2w8t_A 397 TPAQIQTVLGMFQAAGRAVGVI 418 (427)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHHHHHhCcc
Confidence 9999999999999999887654
No 2
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=9.6e-47 Score=374.24 Aligned_cols=386 Identities=27% Similarity=0.454 Sum_probs=329.4
Q ss_pred hHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCC
Q psy15447 38 NVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGP 117 (457)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~ 117 (457)
.+.+.+++....+++. .+..+++++|.+++++|++||||++++++++..+|++.+++.+++.+++.+++.+
T Consensus 10 ~~~~~~~~~~~~~~~~---------~~~~~~~~~g~~v~~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~ 80 (399)
T 3tqx_A 10 QLNKEIEGLKKAGLYK---------SERIITSPQNAEIKVGEKEVLNFCANNYLGLADHPALIKTAQTVVEQYGFGMASV 80 (399)
T ss_dssp HHHHHHHHHHTTTCCC---------CCCCBCSCSSSEEEETTEEEEECSSCCTTSCTTCHHHHHHHHHHHHHHCSCCCSC
T ss_pred HHHHHHHHHHHcCCcc---------ccccccCCCCceEeeCCeeEEEeeccCcccccCCHHHHHHHHHHHHHhCCCCCCc
Confidence 3444555555566655 4678899999999999999999999999897778999999999999988777777
Q ss_pred CCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHH
Q psy15447 118 RGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQ 197 (457)
Q Consensus 118 ~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~ 197 (457)
+..+|..+...++++.+++++|.+..+++++|++|+..++.+++++||.|+++.++|+++..+++..|.++..++.+|++
T Consensus 81 ~~~~g~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~ 160 (399)
T 3tqx_A 81 RFICGTQTIHKELEKDISEFLGTDDTILYSSCFDANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKNNAMG 160 (399)
T ss_dssp CCCCCCBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECTTCTT
T ss_pred CccccCchHHHHHHHHHHHHHCCCcEEEECchHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCCCCHH
Confidence 77788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCC
Q psy15447 198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTE 277 (457)
Q Consensus 198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~ 277 (457)
++++.+++.... ..++++|++++++|++|.+.|+++|+++|++||+++|+||+|+.|.++..+.+..+.+++. .
T Consensus 161 ~l~~~l~~~~~~-----~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~ 234 (399)
T 3tqx_A 161 DLEAKLKEADEK-----GARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVA-D 234 (399)
T ss_dssp HHHHHHHHHHTT-----TCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCT-T
T ss_pred HHHHHHHhhhcc-----CCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCC-C
Confidence 999999875410 1267899999999999999999999999999999999999998887787777766777763 3
Q ss_pred CccEEEecCccccc-CcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHH
Q psy15447 278 EVDMIIGSLEHALG-SVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL-KANPSLLTKLREKCNTMHSL 355 (457)
Q Consensus 278 ~~Di~~~s~sK~lg-~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~-~~~~~~~~~l~~~~~~l~~~ 355 (457)
++|++++|+||++| ++|||+++++++++.+......+.++++.++..++++.++++.+ +..++.+++++++.+++.+.
T Consensus 235 ~~di~~~s~sK~~~g~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 314 (399)
T 3tqx_A 235 RVDILTGTLGKALGGASGGYTSGHKEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAG 314 (399)
T ss_dssp CCSEEEEESSSSSCSSCCEEEEECHHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEecchHhcccCceEEEEcCHHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 45899999999998 88999999999999988766566667778999999999999887 43456889999999999999
Q ss_pred hhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447 356 LSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQ 435 (457)
Q Consensus 356 L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e 435 (457)
|++ .|+++. ++.++++++.++... ...++++.|.++||.+.+..++.. +.+.+++|++++..+|++
T Consensus 315 L~~----~g~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~l~~~gi~v~~~~~~~~--~~~~~~iRi~~~~~~~~~ 380 (399)
T 3tqx_A 315 MEK----LGFQLV-PGNHPIIPVMLGDAQ-------LATNMADHLLQEGIYVVGFSYPVV--PMGKARIRVQMSAVHTQQ 380 (399)
T ss_dssp HHH----HTCCBC-CCSSSEEEEEEECHH-------HHHHHHHHHHHTTEECCEECTTTS--CTTCEEEEEECCTTCCHH
T ss_pred HHH----cCCCcC-CCCCCEEEEEeCCHH-------HHHHHHHHHHHCCCEEeeeCCCCC--CCCCceEEEEeecCCCHH
Confidence 998 466665 567888888877543 567899999999999987665422 234579999999899999
Q ss_pred HHHHHHHHHHHHHHHhc
Q psy15447 436 DMNSLIETLCKSHDIAV 452 (457)
Q Consensus 436 di~~~~~~l~~~~~~~~ 452 (457)
|+++++++|+++++++.
T Consensus 381 ~i~~~~~~l~~~~~~~~ 397 (399)
T 3tqx_A 381 QLDRAIEAFGQVGKKLG 397 (399)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999988753
No 3
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=1.2e-47 Score=382.43 Aligned_cols=358 Identities=18% Similarity=0.294 Sum_probs=313.4
Q ss_pred ecCCCcEEE-ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEe
Q psy15447 68 DQKSGYIVN-INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALY 146 (457)
Q Consensus 68 ~~~~g~~~~-~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~ 146 (457)
.++.+.+++ .+|++||||++++|+++.+||++.+++.+++++++.+..+++..+|+.+...++++++++++|.+..+++
T Consensus 46 ~~~~~~~~~~~~g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~ 125 (409)
T 3kki_A 46 KNGKHLVLGKQASPDDIILQSNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFDECLLS 125 (409)
T ss_dssp TTSSCTTCCCCCCTTSEECCCSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTCSEEEEE
T ss_pred cCCCeeeeCCCCCCceEEeeccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCCCeEEEe
Confidence 355566666 4899999999999999999999999999999998877777777888888999999999999999999999
Q ss_pred cccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447 147 SFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV 226 (457)
Q Consensus 147 ~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v 226 (457)
++|++|+..++++++++||.|+++.++|.++..++...|.++..++.+|++++++.+++. ++++|+++++
T Consensus 126 ~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~----------~~~~vi~~~~ 195 (409)
T 3kki_A 126 QSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMHNNCDHLRMLIQRH----------GPGIIVVDSI 195 (409)
T ss_dssp SCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECTTCHHHHHHHHHHH----------CSCEEEEESB
T ss_pred cchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecCCCHHHHHHHHHhc----------CCeEEEECCC
Confidence 999999999999999999999999999999999999999999999999999999999762 2479999999
Q ss_pred CCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHH
Q psy15447 227 YMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEH 306 (457)
Q Consensus 227 ~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~ 306 (457)
+|++|.+.|+++|+++|++||++||+||+|+.|.+|++|.++...+++. .++||++.|+||++|+.||++++++++++.
T Consensus 196 ~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~-~~~di~~~s~sK~~~~~gg~v~~~~~~~~~ 274 (409)
T 3kki_A 196 YSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLT-REVHFMTASLAKTFAYRAGAIWCNNEVNRC 274 (409)
T ss_dssp CTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCG-GGCSEEEEESSSTTCSSCEEEEESSSGGGT
T ss_pred CCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCC-CCCCEEEeecchhhCCCceEEEECHHHHHH
Confidence 9999999999999999999999999999999988888887777777774 467899999999999889999999998888
Q ss_pred HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch
Q psy15447 307 HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE 386 (457)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 386 (457)
++.....+.++++.++..++++.++++.+++.++++++++++.+++.+.|++ .++++. +.++++++.++...
T Consensus 275 ~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~--~~~~~~~~~~~~~~-- 346 (409)
T 3kki_A 275 VPFISYPAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQ----LGLTIR--SESQIIGLETGDER-- 346 (409)
T ss_dssp HHHHCHHHHHSBCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHT----TTCCCC--CSSSEEEEEEESHH--
T ss_pred HHHhCcCccccCCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH----cCCccC--CCCCEEEEEeCCHH--
Confidence 8776666677777899999999999998877777889999999999999998 466654 46888888887543
Q ss_pred HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 387 VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 387 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
...++++.|+++||++.+..+|.. +.+.+++||+++..+|++|+++++++|+++++..
T Consensus 347 -----~~~~~~~~L~~~Gv~v~~~~~~~~--~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 404 (409)
T 3kki_A 347 -----NTEKVRDYLESNGVFGSVFCRPAT--SKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNYG 404 (409)
T ss_dssp -----HHHHHHHHHHHTTEECEEECTTSS--CTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred -----HHHHHHHHHHHCCceEeeeCCCCc--CCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhcC
Confidence 456799999999999988665432 3446799999999999999999999999998764
No 4
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=3.6e-45 Score=363.43 Aligned_cols=370 Identities=26% Similarity=0.414 Sum_probs=309.9
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE 141 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~ 141 (457)
.|..+++++|+++++ +|++||||++++++++..+|++.+++.+++++++.++++++..+|..+...++++++++++|.+
T Consensus 27 ~~~~~~~~~g~~~~~~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~ 106 (401)
T 1fc4_A 27 EERIITSAQQADITVADGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGME 106 (401)
T ss_dssp CCCCBCSCSSSEEEBTTSCEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHTCS
T ss_pred eeeeeccCCCceEEeeCCccEEEeeccCcccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhCCC
Confidence 477889999999996 9999999999988886568999999999999887655444555566788899999999999998
Q ss_pred cEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447 142 ETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFI 221 (457)
Q Consensus 142 ~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~v 221 (457)
..+++++|++|+..++++++++||.|+++.++|+++..+++..|.++..++.+|++++++.+++...+ ..++++|
T Consensus 107 ~~i~~~sGs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~-----~~~~~~v 181 (401)
T 1fc4_A 107 DAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQELEARLKEAREA-----GARHVLI 181 (401)
T ss_dssp EEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECTTCHHHHHHHHHHHHHT-----TCSSEEE
T ss_pred cEEEeCChHHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECCCCHHHHHHHHHHhhcc-----CCCceEE
Confidence 88999999999999999999999999999999999999999999999999999999999999764310 0156799
Q ss_pred EEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEec
Q psy15447 222 IVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGS 300 (457)
Q Consensus 222 i~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~ 300 (457)
++++++|++|.+.|+++|+++|++||+++|+||+|+.|..+++|.++.+.+++.+ +.|+++.|+||++ |+.||+++++
T Consensus 182 ~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~di~~~s~sK~~~~~~gG~~~~~ 260 (401)
T 1fc4_A 182 ATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RVDIITGTLGKALGGASGGYTAAR 260 (401)
T ss_dssp EEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEEEEESSSTTCSSSCEEEEEC
T ss_pred EEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCc-CCcEEEecchhhccCCCCEEEEcC
Confidence 9999999999999999999999999999999999986766555655555567654 6789999999999 7778999999
Q ss_pred HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447 301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL 380 (457)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~ 380 (457)
+++++.+......+.++.+.+++.++++.++++.+++.++++++++++.+++.+.|++ .|+++. ++.++++++.+
T Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~~~~~~~ 335 (401)
T 1fc4_A 261 KEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSA----AGFTLA-GADHAIIPVML 335 (401)
T ss_dssp HHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH----TTCCBC-CSSSSEEEEEE
T ss_pred HHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH----cCCccc-CCCCCEEEEEc
Confidence 9999988765434545667799999999999998865567889999999999999998 366665 46788888887
Q ss_pred cCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 381 QKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+... ...++.+.|.++||.+.+..++.. +...+++|++++..+|++|+++++++|+++++++.
T Consensus 336 ~~~~-------~~~~l~~~l~~~gi~v~~~~~~~~--~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 398 (401)
T 1fc4_A 336 GDAV-------VAQKFARELQKEGIYVTGFFYPVV--PKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLG 398 (401)
T ss_dssp ECHH-------HHHHHHHHHHHTTEECCEECTTSS--CTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred CChH-------HHHHHHHHHHHCCcEEeeecCCCC--CCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 6432 456799999999999987765422 22346899999998999999999999999988764
No 5
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=1e-44 Score=358.08 Aligned_cols=360 Identities=22% Similarity=0.358 Sum_probs=302.3
Q ss_pred CceeeecCCCcEEEECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc
Q psy15447 63 SKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE 142 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~ 142 (457)
.|..+++++|.+++.+|++|+||+++.++++..+|++.+++.+++++++.+++.++..+|..+...++++.+++++|.+.
T Consensus 22 ~~~~~~~~~g~~~~~~g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~ 101 (384)
T 1bs0_A 22 RRYPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYSR 101 (384)
T ss_dssp CCCCCSBCSSSEEEETTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCSE
T ss_pred ccccccCCCCceEEECCceEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCCc
Confidence 47788999999999999999999998777766689999999999998776544455555777889999999999999998
Q ss_pred EEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447 143 TALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFII 222 (457)
Q Consensus 143 ~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi 222 (457)
.+++++|++|+..++++++++||.|+++.++|+.+...++..|.+++.++.+|++++++.+++.. +.+++|+
T Consensus 102 ~i~~~sGt~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~--------~~~~~v~ 173 (384)
T 1bs0_A 102 ALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARLLASPC--------PGQQMVV 173 (384)
T ss_dssp EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECTTCHHHHHHHHHSCC--------SSCEEEE
T ss_pred EEEeCCcHHHHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHhcC--------CCCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999987532 2368999
Q ss_pred EecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHH
Q psy15447 223 VEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSY 302 (457)
Q Consensus 223 ~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~ 302 (457)
+++++||+|.+.|+++|+++|++||+++|+||+|+.|.++++|.++...++. .+|++++|+||++|+.||+++++++
T Consensus 174 ~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~---~~di~~~s~sK~~~~~GG~~~~~~~ 250 (384)
T 1bs0_A 174 TEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKV---KPELLVVTFGKGFGVSGAAVLCSST 250 (384)
T ss_dssp EESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTC---CCSEEEEESSSTTSSCCEEEEECHH
T ss_pred EeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCC---CCcEEEeeccchhhccCcEEEeCHH
Confidence 9999999999999999999999999999999999988766555554445553 3479999999999988999999999
Q ss_pred HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh--hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447 303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK--ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL 380 (457)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~--~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~ 380 (457)
+++.++.....+.++++.+++.++++.++++.++ ..++.+++++++++++.+.|++ .++++. ++.++++++.+
T Consensus 251 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~~~~~~~ 325 (384)
T 1bs0_A 251 VADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQD----LPFTLA-DSCSAIQPLIV 325 (384)
T ss_dssp HHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT----SSCEEC-SCCSSBCCEEE
T ss_pred HHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHh----cCCccc-CCCCCEEEEEe
Confidence 9988876544455555679999999999998876 3346788999999999999998 467765 35677777777
Q ss_pred cCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 381 QKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
+... ...++.+.|.++||.+.+..++.. +...+++|++++..+|++|+++++++|+++
T Consensus 326 ~~~~-------~~~~l~~~l~~~gi~v~~~~~~~~--~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 326 GDNS-------RALQLAEKLRQQGCWVTAIRPPTV--PAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp ESHH-------HHHHHHHHHHHTTEECCEECTTSS--CTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred CCHH-------HHHHHHHHHHHCCcEEEeecCCCC--CCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 5432 466899999999999988765421 223478999999989999999999999865
No 6
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=100.00 E-value=2.7e-46 Score=371.56 Aligned_cols=384 Identities=13% Similarity=0.115 Sum_probs=293.7
Q ss_pred cccCCCChhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHH
Q psy15447 29 LSKHKKHTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAI 104 (457)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~ 104 (457)
|.+....++++.+...++.|.+..++.....+ .|+++++++|+|||+ |||+||||.++ ..+|+ +||+|.+|+.
T Consensus 37 ~~~~~p~s~~~~~~a~~~~pgg~~~~~~~~~~--~P~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH-~hp~v~~Av~ 113 (454)
T 4ao9_A 37 FTDANPASQRQFEAQARYMPGANSRSVLFYAP--FPLTIARGEGAALWDADGHRYADFIAEYTAGVYGH-SAPEIRDAVI 113 (454)
T ss_dssp HHHHCHHHHHHHHHHTTTSGGGCSSGGGCCSS--CCCEEEEEETTEEEETTCCEEEESSGGGGTTTTCS-CCHHHHHHHH
T ss_pred HhhcCcHhHHHHHHHhhhCCCCCCCCccccCC--CCccEEEeecCEEEECCCCEEEEccccHHhhcccC-CCHHHHHHHH
Confidence 44444557888999999999888776554332 589999999999995 99999999765 23454 4899999999
Q ss_pred HHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc-CCCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHH
Q psy15447 105 DCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM-GLEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTG 180 (457)
Q Consensus 105 ~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~ 180 (457)
+|+++.. ..+ +.++...+|+++|++.+ +.+.++|++||++|++.||+.. +++.++|..+..+|+.+...
T Consensus 114 ~q~~~~~-~~~------~~~~~~~~lae~l~~~~p~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~ 186 (454)
T 4ao9_A 114 EAMQGGI-NLT------GHNLLEGRLARLICERFPQIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGF 186 (454)
T ss_dssp HHHHTCS-CCC------SEESSHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBB
T ss_pred HHHhcCC-Ccc------CCcHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccc
Confidence 9998732 221 23566788999999977 5778899999999999999764 57888889999999876543
Q ss_pred HHhcC-----CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEE
Q psy15447 181 LIASR-----CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIF 251 (457)
Q Consensus 181 ~~~~g-----~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li 251 (457)
....+ .....+++||.+++++.+++.. +.+++||+||+++++|.+.| |++|+++|++||++||
T Consensus 187 ~~~~~~~~~~~~~~~~p~nd~~~l~~~l~~~~--------~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI 258 (454)
T 4ao9_A 187 GARPSPTTVPFDFLVLPYNDAQTARAQIERHG--------PEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLV 258 (454)
T ss_dssp SSSBCTTSCCSEEEEECTTCHHHHHHHHHHTG--------GGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEE
T ss_pred cccccCccCCCCcccCCCchHHHHHHHHhhcC--------CceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEE
Confidence 22222 3466789999999999998765 46899999999999999987 9999999999999999
Q ss_pred EEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcce--ecCCCcHHHHHH
Q psy15447 252 VDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYC--FSASLPPFLAVA 327 (457)
Q Consensus 252 ~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~aa 327 (457)
+||+++ |++|. .+..+++|+.| ||+ |++|++|+ +.|++++++++++.+......+. .+.+.||++|++
T Consensus 259 ~DEV~t-GR~G~--~~a~e~~gv~P---Di~--t~gK~lggG~Piga~~~~~ei~~~~~~~~~~~~h~~T~~gnPla~AA 330 (454)
T 4ao9_A 259 FDEVMT-SRLAP--HGLANKLGIRS---DLT--TLGKYIGGGMSFGAFGGRADVMALFDPRTGPLAHSGTFNNNVMTMAA 330 (454)
T ss_dssp EECTTG-GGGST--TCHHHHHTCCC---SEE--EEEGGGGTTSSCEEEEECHHHHGGGCTTTCSCCCCCTTTTCHHHHHH
T ss_pred EECCCc-CCCcc--ccchhccCCCC---cEE--EeccccCCCCcceeeeeHHHHHHHHhhccCCccccCCCCCCHHHHHH
Confidence 999997 56654 34568999988 777 89999963 45889999999988754332222 233469999999
Q ss_pred HHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc-----h-HHHHHHHHHHHHHHH
Q psy15447 328 ANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD-----E-VASKKLLQTICDMCI 401 (457)
Q Consensus 328 a~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~-~~~~~~~~~~~~~l~ 401 (457)
++++|+++++ +++.+++++++++|++.|+++....++.......+.++.+.+..... . ..+......+...|+
T Consensus 331 ala~L~~l~~-~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll 409 (454)
T 4ao9_A 331 GYAGLTKLFT-PEAAGALAERGEALRARLNALCANEGVAMQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLL 409 (454)
T ss_dssp HHHHHHHTSC-HHHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhc-cChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHH
Confidence 9999999864 56889999999999999987432223221113457788887654211 0 112335567888999
Q ss_pred HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 402 QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 402 ~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
++||++.|.. ++.++..||++|||++++++++++++..
T Consensus 410 ~~Gv~~~p~~-------------~~~~s~~~T~~dId~~l~al~~~l~~~~ 447 (454)
T 4ao9_A 410 NEDIYSSPRG-------------FVVLSLPLTDADIDRYVAAIGSFIGGHG 447 (454)
T ss_dssp HTTEECCTTC-------------EEECCTTCCHHHHHHHHHHHHHHHHHSG
T ss_pred HCCEEEcCCC-------------CEEEeCCCCHHHHHHHHHHHHHHHHhcc
Confidence 9999986532 2456677999999999999999998764
No 7
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=2.9e-44 Score=356.58 Aligned_cols=369 Identities=26% Similarity=0.456 Sum_probs=308.8
Q ss_pred CceeeecCCCcEEEECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc
Q psy15447 63 SKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE 142 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~ 142 (457)
.|..+++++|++++.+|++++||++++++++..+|.+.+++.+++++++..+.+++...|..+...++++.+++++|.+.
T Consensus 26 ~~~~~~~~~g~~~~~~g~~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~ 105 (398)
T 3a2b_A 26 YFRPIQSKQDTEVKIDGRRVLMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGKEA 105 (398)
T ss_dssp SSCCBCSCSSSEEEETTEEEEECSCSCTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCSE
T ss_pred ceeeecCCCCceEEECCceEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCc
Confidence 57889999999999999999999998877776789999999999988765555555566788999999999999999999
Q ss_pred EEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447 143 TALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFII 222 (457)
Q Consensus 143 ~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi 222 (457)
++++++|++|+..++++++++||.|+++.++|+++...++..|.++..++..|++++++.+++.. ++++++|+
T Consensus 106 v~~~~ggt~a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~-------~~~~~~v~ 178 (398)
T 3a2b_A 106 AILFSTGFQSNLGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGHNNMEDLRAKLSRLP-------EDSAKLIC 178 (398)
T ss_dssp EEEESSHHHHHHHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECTTCHHHHHHHHHTSC-------SSSCEEEE
T ss_pred EEEECCHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCCCCHHHHHHHHHhhc-------cCCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999997632 01568999
Q ss_pred EecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHH
Q psy15447 223 VEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSY 302 (457)
Q Consensus 223 ~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~ 302 (457)
+++++||+|.+.|+++|+++|++||+++|+||+|+.|.+++.+..+.+.+++. +++|++++|+||++|+.|||++++++
T Consensus 179 ~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~di~~~s~sK~~~~~GG~~~~~~~ 257 (398)
T 3a2b_A 179 TDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLN-DDVDLIMGTFSKSLASLGGFVAGDAD 257 (398)
T ss_dssp EESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCG-GGCSEEEEESSSTTCSSCEEEEECHH
T ss_pred EeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCC-cCCeEEEecccccccCCCcEEEeCHH
Confidence 99999999999999999999999999999999999887765555555555653 35689999999999987899999999
Q ss_pred HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecC
Q psy15447 303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQK 382 (457)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~ 382 (457)
+++.+......+.++++.++..++++.++++.++..++.+++++++.+++.+.|++ .|+++. .+.++++++.++.
T Consensus 258 ~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~g~~~~~~~~~ 332 (398)
T 3a2b_A 258 VIDFLKHNARSVMFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLD----HGFDLG-ATESPILPIFIRS 332 (398)
T ss_dssp HHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHH----TTCCBC-SCCSSEEEEECCC
T ss_pred HHHHHHHhcccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHh----cCCCcC-CCCCCEEEEEcCC
Confidence 99888764433455556688877777788887765567889999999999999998 366664 3457888888764
Q ss_pred CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 383 SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 383 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
.. ...++.+.|.++||.+.++..+.. +...+++|++++..+|++|+++++++|+++++++.-
T Consensus 333 ~~-------~~~~l~~~l~~~gi~v~~~~~~~~--~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~~~ 394 (398)
T 3a2b_A 333 NE-------KTFWVTKMLQDDGVFVNPVVSPAV--PAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQAEV 394 (398)
T ss_dssp HH-------HHHHHHHHHHHTTEECEEECTTTS--CGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHCC-
T ss_pred HH-------HHHHHHHHHHHCCcEEEeeCCCCC--CCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHhCc
Confidence 32 456799999999999988765422 123578999999889999999999999999887653
No 8
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=100.00 E-value=3.9e-44 Score=357.78 Aligned_cols=382 Identities=13% Similarity=0.136 Sum_probs=288.3
Q ss_pred hhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcC
Q psy15447 36 TINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNG 111 (457)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~ 111 (457)
++++.+..++..+.++..+ .|+++++++|+|||+ |||+||||.++ ..+|++ ||+|.+|+.+|+.++.
T Consensus 27 s~~l~~r~~~~~~~~~~~~--------~P~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~q~~~~~ 97 (456)
T 4atq_A 27 SQALAERRSAVVAAGVASG--------VPVYVEDADGGIIRDVDGNSFIDLGSGIAVTSVGAS-DPAVVAAVQEAAAHFT 97 (456)
T ss_dssp HHHHHHHHHHHBCTTCCCS--------CSSCEEEEETTEEEETTSCEEEESSHHHHTCTTCTT-CHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHhCCCCCCCC--------CCCeEEeeecCEEEeCCCCEEEEccccHHHHhcCCC-CHHHHHHHHHHHhhcc
Confidence 6677777777766655432 588899999999995 99999999764 445664 8999999999999965
Q ss_pred CCCCCCCCcccChHHHHHHHHHHHhhcC---CCcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhcC
Q psy15447 112 VGSCGPRGFYGTNVVHLDLENDIASFMG---LEETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIASR 185 (457)
Q Consensus 112 ~~~~~~~~~~g~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~g 185 (457)
+.. .+..+++...+|+++|+++.+ .++++|++||++|++.|++. +.++.++|..+..+|+.+..++.+++
T Consensus 98 ~~~----~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~ 173 (456)
T 4atq_A 98 HTC----FMVTPYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTA 173 (456)
T ss_dssp CCT----TTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCC
T ss_pred Ccc----cCccCcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCcccccccccc
Confidence 422 223357888899999999885 45688999999999999975 46788888899999999887777654
Q ss_pred C-------------eEEEecCC-----------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hH
Q psy15447 186 C-------------KVQYFKHN-----------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LK 237 (457)
Q Consensus 186 ~-------------~~~~~~~~-----------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~ 237 (457)
. .+..+|.+ +.+.+++.++..... ..++++++|++||+++.+|.+.| ++
T Consensus 174 ~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~---~~~~~iAAvivEPiqg~gG~~~p~~~fl~ 250 (456)
T 4atq_A 174 KAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQ---IGGDQVAAIIIEPIQGEGGFIVPAEGFLP 250 (456)
T ss_dssp CCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHH---TCGGGEEEEEECSSBTTTTCBCCCTTHHH
T ss_pred CccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHh---hcCCceEEEEeccccCCCCccccchhhhH
Confidence 2 23333322 345555554432211 11257899999999999998876 89
Q ss_pred HHHHHHHHcCcEEEEEcCcc-cccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcc
Q psy15447 238 DILSLRSKYQARIFVDESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGY 314 (457)
Q Consensus 238 ~i~~l~~~~g~~li~DEa~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~ 314 (457)
+|+++|++||++||+||+++ +|++|. .+..+++|+.| ||+ +++|++|+ +.|++++++++++.+....++.
T Consensus 251 ~lr~lc~~~gillI~DEV~tG~GRtG~--~~a~e~~gv~P---Div--t~gK~lggg~P~~av~~~~~i~~~~~~~~~~~ 323 (456)
T 4atq_A 251 ALSEWAKEKGIVFIADEVQSGFCRTGE--WFAVDHEGVVP---DII--TMAKGIAGGLPLSAITGRADLLDAVHPGGLGG 323 (456)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGGGTTCCC---SEE--EECGGGGTTSSCEEEEEEHHHHTTSCTTSSCC
T ss_pred HHHHHHhhcCCceEecccccccCCccc--cccccccCCCC---chh--hhhhcccCcCCceeeEecHHHHhcccccCCCC
Confidence 99999999999999999985 455553 34568999988 787 79999963 4478899999988876665555
Q ss_pred eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccC---CeEEec--cCCCCeEEEEecCCcchHHH
Q psy15447 315 CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQ---RFLVQG--HRDTPLKYLYLQKSDDEVAS 389 (457)
Q Consensus 315 ~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~---~~~~~~--~~~~~~~~i~~~~~~~~~~~ 389 (457)
+|+ .+|++|++++++|+++++++ +.++++++.+++++.|+++.... ..++++ +..+.++.+.+..+...+..
T Consensus 324 Tf~--gnpla~aaala~L~~i~~~~-l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~ 400 (456)
T 4atq_A 324 TYG--GNPVACAAALAAIDTMEQHD-LNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAIELVQPGSKEPN 400 (456)
T ss_dssp SSS--SCHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEEEEEBCTTSCCBC
T ss_pred CCC--CChHHHHhhHHHHHHHhhcc-HHHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEEEEEecCCCCCcC
Confidence 555 49999999999999998764 88999999999999887743211 111111 34578888888654322222
Q ss_pred HHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 390 KKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 390 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
.....++.+.|+++|+++.+.+ ...+.+||.|++.+|++|+|+++++|+++++.
T Consensus 401 ~~~~~~v~~~~~~~Gvl~~~~g-------~~~~~irl~PpL~it~~~id~~l~~l~~al~a 454 (456)
T 4atq_A 401 AELTKAVAAACLKEGVIILTCG-------TYGNVIRLLPPLVISDELLIDGLEVLAAAIKA 454 (456)
T ss_dssp HHHHHHHHHHHHHTTEECEEEC-------TTSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEecC-------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 3356789999999999987543 22579999999999999999999999999874
No 9
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=100.00 E-value=1e-43 Score=356.07 Aligned_cols=362 Identities=15% Similarity=0.099 Sum_probs=274.7
Q ss_pred CCceeeecCCCcEEEE-CCeeeEEeecCC---ccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q psy15447 62 SSKYVVDQKSGYIVNI-NGIPCINFATHN---YLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASF 137 (457)
Q Consensus 62 ~~~~~i~~~~g~~~~~-~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~ 137 (457)
..|++|++++|+|||+ |||+||||.++. .+|+ +||+|.+|+.+|+++....+ ..+...++...+|+++|+++
T Consensus 48 ~~P~vi~rg~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~q~~~l~~~~---~~~~~~~~~~~~lAe~L~~~ 123 (473)
T 4e3q_A 48 RGTVVVTHGEGPYIVDVNGRRYLDANSGLWNMVAGF-DHKGLIDAAKAQYERFPGYH---AFFGRMSDQTVMLSEKLVEV 123 (473)
T ss_dssp HCCEEEEEEETTEEEETTCCEEEETTTTTTTCTTCS-CCHHHHHHHHHHHHHCCCCC---CCTTEEEHHHHHHHHHHHHH
T ss_pred CCCEEEEeeecCEEEeCCCCEEEEcccCHHHhhccC-CCHHHHHHHHHHHHhccccc---ccccccCHHHHHHHHHHHhh
Confidence 3589999999999995 999999997752 3455 48999999999999965321 12223578889999999999
Q ss_pred cC--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe-----------EEEecCCC
Q psy15447 138 MG--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK-----------VQYFKHNN 195 (457)
Q Consensus 138 ~g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~-----------~~~~~~~d 195 (457)
.+ .++++|++||++|++.|++... ++..+|.....||+.+..++.+++.. ...++.++
T Consensus 124 ~p~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~ 203 (473)
T 4e3q_A 124 SPFDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPH 203 (473)
T ss_dssp SSCSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCC
T ss_pred CCCCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCc
Confidence 85 5689999999999999998642 34457788899999988888777521 22222211
Q ss_pred ------------------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447 196 ------------------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVD 253 (457)
Q Consensus 196 ------------------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~D 253 (457)
.+++++.+.+.. ++++++|++||+++.+|.+.| +++|+++|++||++||+|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-------~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~D 276 (473)
T 4e3q_A 204 YWRYGEEGETEEQFVARLARELEETIQREG-------ADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISD 276 (473)
T ss_dssp HHHHSCTTCCHHHHHHHHHHHHHHHHHHHC-------GGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEE
T ss_pred ccccccccchhhHHHHHHHHHHHHHHHhhC-------CCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEecc
Confidence 234555555433 267899999999999998876 899999999999999999
Q ss_pred cCcccccccCCCCc-cccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhh-----CCcceecCCCcHHH
Q psy15447 254 ESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLS-----GSGYCFSASLPPFL 324 (457)
Q Consensus 254 Ea~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 324 (457)
|+++. +|++|.+ ..+++|+.| ||+ +++|++|+ +.|++++++++++.+... ...+.++.+.+|++
T Consensus 277 EV~tG--fGRtG~~fa~e~~gv~P---Di~--t~~K~l~gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla 349 (473)
T 4e3q_A 277 EVICG--FGRTGNTWGCVTYDFTP---DAI--ISSKNLTAGFFPMGAVILGPELSKRLETAIEAIEEFPHGFTASGHPVG 349 (473)
T ss_dssp CTTTS--SSTTSSSCHHHHTTCCC---SEE--EECGGGGTTSSCCEEEEECHHHHHHHHHHHHHHSCCCCCCTTTTCHHH
T ss_pred Ccccc--CCcccchhHHHhcCCCC---ChH--HhcccccCCCCCcccccccHHHHHHhccccccccccccCCCCCCCcch
Confidence 99852 3444554 468899988 787 79999953 457889999998877432 11123334459999
Q ss_pred HHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHHH
Q psy15447 325 AVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDMC 400 (457)
Q Consensus 325 ~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l 400 (457)
|++++++|+++++++ +.+++++++++|++.|+++...+.+.-+ +..+.++.+.+..+... ........++.+.|
T Consensus 350 ~Aaala~L~~i~~~~-l~~~~~~~g~~l~~~L~~l~~~~~v~~v-RG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~ 427 (473)
T 4e3q_A 350 CAIALKAIDVVMNEG-LAENVRRLAPRFEERLKHIAERPNIGEY-RGIGFMWALEAVKDKASKTPFDGNLSVSERIANTC 427 (473)
T ss_dssp HHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHTTSTTEEEE-EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHH
T ss_pred hhhhhhhhhhhcccc-HHHHHHHHHHHHHHHHHHHhcCCCeeEE-eecceEEEEEEecCccccccccccHHHHHHHHHHH
Confidence 999999999998764 8899999999999999886544554322 34578888887543211 11122456799999
Q ss_pred HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 401 IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 401 ~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
+++|+++++.+ +.+||+||+.+|++|+|+++++++++++++..
T Consensus 428 ~~~Gll~~~~g----------~~i~l~PPL~it~~eid~~~~~l~~al~~v~a 470 (473)
T 4e3q_A 428 TDLGLICRPLG----------QSVVLCPPFILTEAQMDEMFDKLEKALDKVFA 470 (473)
T ss_dssp HHTTEECEEET----------TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCcEEEecC----------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999987643 78999999999999999999999999987643
No 10
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=100.00 E-value=8.8e-43 Score=352.66 Aligned_cols=360 Identities=14% Similarity=0.129 Sum_probs=276.7
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|.++|+ ||++||||+++ +++|++ ||+|++|+.+++++....++ ...+.++...+|+++|++++
T Consensus 37 ~p~~~~~~~G~~l~d~~G~~ylD~~s~~~~~~lGh~-~p~v~~A~~~~~~~~~~~~~---~~~~~~~~~~~lae~l~~~~ 112 (472)
T 3hmu_A 37 GTRVITRARGVWLNDSEGEEILDAMAGLWCVNIGYG-RDELAEVAARQMRELPYYNT---FFKTTHVPAIALAQKLAELA 112 (472)
T ss_dssp CCEEEEEEEBTEEEETTCCEEECTTHHHHTCTTCBC-CHHHHHHHHHHHHHCSCCCS---SSSEECHHHHHHHHHHHHHS
T ss_pred CCeeEEEeecCEEEECCCCEEEECCCchhhccCCCC-CHHHHHHHHHHHHhcccccc---ccccCCHHHHHHHHHHHHhC
Confidence 588999999999995 99999999886 556765 89999999999998653322 22346789999999999998
Q ss_pred C--CCcEEEecccHHHHHHHHHhhcC---------CCCEEEEeCcccHHHHHHHHhcCCe-----------EEEec--C-
Q psy15447 139 G--LEETALYSFGFSTSASAIAAYVK---------RNDAVFVDENINFAIQTGLIASRCK-----------VQYFK--H- 193 (457)
Q Consensus 139 g--~~~~i~~~sG~~a~~~ai~a~~~---------~gd~v~~~~~~h~~~~~~~~~~g~~-----------~~~~~--~- 193 (457)
+ .+++++++||++|++.+++++.. +.++|+.+..+|+.+..+..+++.. +..++ .
T Consensus 113 ~~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~ 192 (472)
T 3hmu_A 113 PGDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNW 192 (472)
T ss_dssp CTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCH
T ss_pred CCCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCcc
Confidence 5 46789999999999999998763 4456677888898888777766532 22333 2
Q ss_pred ---CC-----------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcC
Q psy15447 194 ---NN-----------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDES 255 (457)
Q Consensus 194 ---~d-----------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa 255 (457)
++ +++|++.+++.. ++++++|++||+++++|.+.| |++|+++|++||++||+||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~le~~i~~~~-------~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv 265 (472)
T 3hmu_A 193 WAEGGDMDPEEFGLARARELEEAILELG-------ENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEV 265 (472)
T ss_dssp HHHCTTCCHHHHHHHHHHHHHHHHHHHC-------GGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECT
T ss_pred ccCCcccCHHHHHHHHHHHHHHHHHhcC-------CCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 22 778888887543 146789999999999999887 99999999999999999999
Q ss_pred cc-cccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHH
Q psy15447 256 VS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKA 331 (457)
Q Consensus 256 ~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~ 331 (457)
|+ +|+.|. .+..+++++.| |++ ||||++|+.| |++++++++++.+......+.++.+.+|++|++++++
T Consensus 266 ~~gfgr~G~--~~a~~~~~v~p---di~--t~sK~l~gg~~plG~v~~~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aa 338 (472)
T 3hmu_A 266 ICGFGRTGN--WFGTQTMGIRP---HIM--TIAKGLSSGYAPIGGSIVCDEVAHVIGKDEFNHGYTYSGHPVAAAVALEN 338 (472)
T ss_dssp TTTTTTTSS--SCHHHHHTCCC---SEE--EECGGGTTTSSCCEEEEEEHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHH
T ss_pred ccCCcccCc--cchhHHhCCCC---cee--eechhhhcCCcceEEEEECHHHHHhcccCCccccCCCCCCHHHHHHHHHH
Confidence 86 554443 34467888877 676 7999997543 8999999999988322112233445699999999999
Q ss_pred HHHHhhCcHHHHHHH-HHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HH---H-HHHHHHHHHHHHHcCe
Q psy15447 332 LHLLKANPSLLTKLR-EKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VA---S-KKLLQTICDMCIQAGF 405 (457)
Q Consensus 332 l~~~~~~~~~~~~l~-~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~---~-~~~~~~~~~~l~~~Gi 405 (457)
|+.+++. ++.++++ ++.+++++.|+++...+.+... ++.+.++.+.+..+... .. . .....++++.|+++||
T Consensus 339 L~~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-r~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 416 (472)
T 3hmu_A 339 LRILEEE-NILDHVRNVAAPYLKEKWEALTDHPLVGEA-KIVGMMASIALTPNKASRAKFASEPGTIGYICRERCFANNL 416 (472)
T ss_dssp HHHHHHT-THHHHHHHTHHHHHHHHHHGGGGSTTEEEE-EEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTB
T ss_pred HHHHHHh-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecCceEEEEEecCccccccccchhHHHHHHHHHHHHHCCc
Confidence 9988764 5889999 9999999999875434445443 45677888887643210 00 0 1135678999999999
Q ss_pred eEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 406 AITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 406 ~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
++++.+ +++||+|++.+|++|+++++++|+++++++.
T Consensus 417 ~v~~~g----------~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~~ 453 (472)
T 3hmu_A 417 IMRHVG----------DRMIISPPLVITPAEIDEMFVRIRKSLDEAQ 453 (472)
T ss_dssp CCEEET----------TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecC----------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 987642 7999999999999999999999999987664
No 11
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=100.00 E-value=1.4e-42 Score=351.67 Aligned_cols=360 Identities=14% Similarity=0.151 Sum_probs=275.9
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|.++|+ ||++||||+++ +.+|+. ||+|++|+.++++++++++. +.+.++.+.+|+++|++++
T Consensus 36 ~p~~~~~~~G~~~~d~~G~~ylD~~s~~~~~~lGh~-~p~v~~A~~~~l~~~~~~~~----~~~~~~~~~~la~~l~~~~ 110 (476)
T 3i5t_A 36 AQPVLTHAEGIYVHTEDGRRLIDGPAGMWCAQVGYG-RREIVDAMAHQAMVLPYASP----WYMATSPAARLAEKIATLT 110 (476)
T ss_dssp CCCBEEEEEBTEEEETTCCEEEETTHHHHTCTTCBC-CHHHHHHHHHHHHHCCCCCT----TTCBCHHHHHHHHHHHTTS
T ss_pred CCeeEEEeecCEEEECCCCEEEECCCchhhccCCCC-CHHHHHHHHHHHHhccCccc----CccCCHHHHHHHHHHHhcC
Confidence 588999999999995 99999999886 446664 89999999999998654332 1347889999999999998
Q ss_pred C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEec--C
Q psy15447 139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFK--H 193 (457)
Q Consensus 139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~--~ 193 (457)
+ .+++++++||++|++.|+++++ ++.++|+.+..+|+.+..+..+++.. +..++ +
T Consensus 111 ~~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 190 (476)
T 3i5t_A 111 PGDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPN 190 (476)
T ss_dssp STTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCC
T ss_pred CCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCc
Confidence 4 6788999999999999999874 34456777888898888777766532 22222 2
Q ss_pred -----C-C--------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcC
Q psy15447 194 -----N-N--------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDES 255 (457)
Q Consensus 194 -----~-d--------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa 255 (457)
+ | +++|++.+++.. ++++++|++||+++++|.+.| |++|+++|++||++||+||+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~le~~i~~~~-------~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv 263 (476)
T 3i5t_A 191 PRHAGNRSQEAFLDDLVQEFEDRIESLG-------PDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEV 263 (476)
T ss_dssp GGGCTTSCHHHHHHHHHHHHHHHHHHHC-------GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECT
T ss_pred ccccCCCchHHHHHHHHHHHHHHHHhcC-------CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 2 1 788988887543 146789999999999998766 99999999999999999999
Q ss_pred cccccccCCCCc-ccc-ccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhC---C--cceecCCCcHHHH
Q psy15447 256 VSFGTLGSTGHG-VTE-YFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSG---S--GYCFSASLPPFLA 325 (457)
Q Consensus 256 ~~~g~~g~~g~~-~~~-~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~ 325 (457)
|+. +|++|.. ..+ ++++.| |++ |+||++|+ +.|++++++++++.+.... . .+.++.+.+|++|
T Consensus 264 ~~g--~gr~G~~~~~~~~~~v~p---di~--t~sK~l~~G~~plg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~ 336 (476)
T 3i5t_A 264 VTG--FGRCGEWFASEKVFGVVP---DII--TFAKGVTSGYVPLGGLAISEAVLARISGENAKGSWFTNGYTYSNQPVAC 336 (476)
T ss_dssp TTT--TTTTSSSCHHHHTTCCCC---SEE--EECGGGGTTSSCCEEEEECHHHHHTTSGGGCTTCEECCCCTTTTCHHHH
T ss_pred ccC--CccccCceeeecccCCCc---chh--hhhhhhcCCCcCeEEEEECHHHHHHHhcCCcccccccccCCCCcCHHHH
Confidence 862 3444443 346 888877 676 79999974 3388999999998886531 1 1223445699999
Q ss_pred HHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHHHH
Q psy15447 326 VAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDMCI 401 (457)
Q Consensus 326 aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l~ 401 (457)
++++++|+.++++ ++.++++++.+++++.|+++...+.+... ++.+.++++.+..+... ........++++.|+
T Consensus 337 aAa~aaL~~~~~~-~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 414 (476)
T 3i5t_A 337 AAALANIELMERE-GIVDQAREMADYFAAALASLRDLPGVAET-RSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCF 414 (476)
T ss_dssp HHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHTTTTSTTEEEE-EEETTEEEEEECCC-----CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecCceeEEEEecCccccccccchhHHHHHHHHHHH
Confidence 9999999988764 58899999999999999875434444443 45677888877654211 111123567899999
Q ss_pred HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 402 QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 402 ~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
++||++++.+ +++||+|++.+|++|+++++++|+++++++.+
T Consensus 415 ~~Gv~v~~~g----------~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~ 456 (476)
T 3i5t_A 415 ELGLIVRPLG----------DLCVISPPLIISRAQIDEMVAIMRQAITEVSA 456 (476)
T ss_dssp HTTEECEEET----------TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCEEEecC----------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999987632 78999999999999999999999999877643
No 12
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=100.00 E-value=5.5e-42 Score=340.51 Aligned_cols=352 Identities=21% Similarity=0.370 Sum_probs=289.5
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAI 157 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai 157 (457)
||++++||.+|++++++.+|++.+++.+++++++..+++++..++..+...++++++++++|.+..+++++|++++..++
T Consensus 44 ~g~~~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~i~~~sG~~a~~~~~ 123 (401)
T 2bwn_A 44 GKQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATL 123 (401)
T ss_dssp CEEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHH
T ss_pred CCCcEEEeeCCCcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCCCcEEEECCcHHHHHHHH
Confidence 68999999999888887789999999999998776655566667788899999999999999988899999999888888
Q ss_pred Hhhc--CCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC
Q psy15447 158 AAYV--KRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP 235 (457)
Q Consensus 158 ~a~~--~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~ 235 (457)
.++. .+||.|+++.++|.++..+++..|.++..++.+|++++++.+++... +++++|++++++|++|.+.|
T Consensus 124 ~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~le~~l~~~~~-------~~~~~v~~~~~~nptG~~~~ 196 (401)
T 2bwn_A 124 STLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHNDVAHLRELIAADDP-------AAPKLIAFESVYSMDGDFGP 196 (401)
T ss_dssp HHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTTCHHHHHHHHHHSCT-------TSCEEEEEESBCTTTCCBCC
T ss_pred HHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHhhcc-------CCceEEEEecCcCCCCCcCC
Confidence 7754 58999999999999999999999999999999999999999976431 35689999999999999999
Q ss_pred hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcce
Q psy15447 236 LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYC 315 (457)
Q Consensus 236 l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~ 315 (457)
+++|+++|++||+++|+||+|+.|.+|+.|.++...+++. ++.|++++|+||++|+.||++++++++++.++.....+.
T Consensus 197 l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~-~~~~i~~~s~sK~~~~~GG~~~~~~~~~~~l~~~~~~~~ 275 (401)
T 2bwn_A 197 IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLM-HRIDIFNGTLAKAYGVFGGYIAASARMVDAVRSYAPGFI 275 (401)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCG-GGCSEEEEESSSTTCSCCEEEEECHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCcc-ccCcEEEeechhhccCCCCEEecCHHHHHHHHHhCcCce
Confidence 9999999999999999999999888887777665555553 245899999999999889999999999888775444445
Q ss_pred ecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHH
Q psy15447 316 FSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLL 393 (457)
Q Consensus 316 ~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 393 (457)
++++.+++.++++.++++.+++. ++++++++++.+++.+.|++ .|+++.. +.++++++.++... ..
T Consensus 276 ~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~-~~~~~~~~~~~~~~-------~~ 343 (401)
T 2bwn_A 276 FSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKA----LGMPIID-HGSHIVPVVIGDPV-------HT 343 (401)
T ss_dssp TSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH----HTCCBCC-CSSSCEEEECCCHH-------HH
T ss_pred ecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH----CCCcccC-CCCCeEEEEeCChH-------HH
Confidence 55555778888888999888654 56788999999999999988 3666653 44568888775422 45
Q ss_pred HHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 394 QTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 394 ~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
.++.+.|+ ++||.+.+...+.. +.+.+++|++++..+|++|+++++++|+++++++
T Consensus 344 ~~~~~~L~~~~gi~v~~~~~~~~--~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~~ 400 (401)
T 2bwn_A 344 KAVSDMLLSDYGVYVQPINFPTV--PRGTERLRFTPSPVHDLKQIDGLVHAMDLLWARC 400 (401)
T ss_dssp HHHHHHHHHHHCEECCEECTTTS--CTTCCEEEECCCTTSCHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHhcCCEEEeecCCCCC--CCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Confidence 67889996 78999987664321 2233689999999999999999999999887543
No 13
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=100.00 E-value=7.2e-42 Score=343.39 Aligned_cols=345 Identities=17% Similarity=0.154 Sum_probs=273.1
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeecC-CccCCC-CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFATH-NYLSFV-ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG 139 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s~-~~l~~~-~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g 139 (457)
.|+++++++|+++|+ ||++||||+++ ++++++ .||++.+|+.+++++++..+ +. ...+...+++++|++++|
T Consensus 58 ~~~~~~~~~G~~~~d~~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~---~~--~~~~~~~~l~~~la~~~g 132 (439)
T 2oat_A 58 LPVALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTS---RA--FYNNVLGEYEEYITKLFN 132 (439)
T ss_dssp CSCEEEEEEBTEEEETTCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCC---TT--SEESSHHHHHHHHHHHHT
T ss_pred CCeeEEeeecCEEEECCCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCccc---Cc--cCCHHHHHHHHHHHHhcC
Confidence 477889999999995 99999999884 566666 78999999999998864321 21 146778999999999999
Q ss_pred CCcEEEecccHHHHHHHHHhhc---------CCC-C-EEEEeCcccHHHHHHHHhcC------------CeEEEecCCCH
Q psy15447 140 LEETALYSFGFSTSASAIAAYV---------KRN-D-AVFVDENINFAIQTGLIASR------------CKVQYFKHNNM 196 (457)
Q Consensus 140 ~~~~i~~~sG~~a~~~ai~a~~---------~~g-d-~v~~~~~~h~~~~~~~~~~g------------~~~~~~~~~d~ 196 (457)
.+.+++++||++|+..+++++. .+| | +|+.+..+|+.+..++..++ ..+..++++|+
T Consensus 133 ~~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~d~ 212 (439)
T 2oat_A 133 YHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDL 212 (439)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSSCH
T ss_pred CCEEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCCCCH
Confidence 9999999999999999998864 234 4 45556677887777777665 46788889999
Q ss_pred HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC----ChHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccc
Q psy15447 197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC----PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEY 271 (457)
Q Consensus 197 ~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~----~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~ 271 (457)
+++++.++. +++++|++||+++++|.+. ++++|+++|++||++||+||+|+ | +|++|.++ .++
T Consensus 213 ~~le~~l~~----------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~-g-~g~~g~~~~~~~ 280 (439)
T 2oat_A 213 PALERALQD----------PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQT-G-LARTGRWLAVDY 280 (439)
T ss_dssp HHHHHHTTS----------TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-T-TTTTSSSSGGGG
T ss_pred HHHHHHhCC----------CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-C-CccCCcchhHHH
Confidence 999998852 3568999999999999876 59999999999999999999994 3 55666654 377
Q ss_pred cCCCCCCccEEEecCcccccCc---ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHH
Q psy15447 272 FGVSTEEVDMIIGSLEHALGSV---GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREK 348 (457)
Q Consensus 272 ~~~~~~~~Di~~~s~sK~lg~~---gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~ 348 (457)
+++.| |++ |+||++|+. +|++++++++++.+....++.+| +.+|++++++.++++.+++. ++.++++++
T Consensus 281 ~~~~~---Di~--t~sK~l~~G~~~~G~v~~~~~~~~~l~~~~~~~t~--~~~~~~~aaa~aal~~~~~~-~~~~~~~~~ 352 (439)
T 2oat_A 281 ENVRP---DIV--LLGKALSGGLYPVSAVLCDDDIMLTIKPGEHGSTY--GGNPLGCRVAIAALEVLEEE-NLAENADKL 352 (439)
T ss_dssp GTCCC---SEE--EECGGGGTTSSCCEEEEECHHHHTTSCTTSSCCSS--TTCHHHHHHHHHHHHHHHHT-THHHHHHHH
T ss_pred hCCCC---cEE--EecccccCCCCCeEEEEECHHHHhccCCCCcccCC--CcCHHHHHHHHHHHHHHhhh-hHHHHHHHH
Confidence 78766 676 899999653 79999999988777544334444 45999999999999988764 588999999
Q ss_pred HHHHHHHhhcccccCCeEEeccCCCCeEEEEecCC--cchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEE
Q psy15447 349 CNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKS--DDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRI 426 (457)
Q Consensus 349 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi 426 (457)
++++++.|+++. .+.+... ++.+.++++.+... . ...++++.|+++||++.+.. .+++|+
T Consensus 353 ~~~l~~~L~~l~-~~~~~~~-~~~g~~~~v~l~~~~~~-------~~~~l~~~l~~~Gv~v~~~~---------~~~iRi 414 (439)
T 2oat_A 353 GIILRNELMKLP-SDVVTAV-RGKGLLNAIVIKETKDW-------DAWKVCLRLRDNGLLAKPTH---------GDIIRF 414 (439)
T ss_dssp HHHHHHHHTTSC-TTTEEEE-EEETTEEEEEECCCSSC-------CHHHHHHHHHHTTEECCBSS---------SSEEEE
T ss_pred HHHHHHHHHHhc-CCCcEEE-EeeeeEEEEEEecCccH-------HHHHHHHHHHHCCeEEecCC---------CCEEEE
Confidence 999999998842 1222111 34578888888654 2 34579999999999987632 478999
Q ss_pred EecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 427 TCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 427 ~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
+++..+|++|+++++++|++++++
T Consensus 415 ~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 415 APPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred ECccCCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998764
No 14
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=100.00 E-value=7.1e-42 Score=342.91 Aligned_cols=348 Identities=18% Similarity=0.180 Sum_probs=263.6
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeecC-CccCCC-CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFATH-NYLSFV-ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG 139 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s~-~~l~~~-~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g 139 (457)
.|+++++++|+++|+ ||++||||+++ ++++++ .||++.+|+.++++++...+ +. ...+...+++++|++++|
T Consensus 47 ~~~~~~~~~g~~~~d~~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~~~---~~--~~~~~~~~l~~~la~~~g 121 (433)
T 1z7d_A 47 IPVVLKRAKGVFVYDVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICS---RA--FFSVPLGICERYLTNLLG 121 (433)
T ss_dssp EEEEEEEEEBTEEEETTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCC---TT--SEEHHHHHHHHHHHHHHT
T ss_pred CCceEEeeecCEEEECCCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCCcc---CC--cCCHHHHHHHHHHHhhcC
Confidence 377889999999995 99999999884 456666 68999999999998854321 11 257889999999999999
Q ss_pred CCcEEEecccHHHHHHHHHhhc---------CCC-CEEEE-eCcccHHHHHHHHhcC------------CeEEEecCCCH
Q psy15447 140 LEETALYSFGFSTSASAIAAYV---------KRN-DAVFV-DENINFAIQTGLIASR------------CKVQYFKHNNM 196 (457)
Q Consensus 140 ~~~~i~~~sG~~a~~~ai~a~~---------~~g-d~v~~-~~~~h~~~~~~~~~~g------------~~~~~~~~~d~ 196 (457)
.+.+++++||++|+..+++++. .+| +.|++ +..+|+.+..++.+.+ ..+..++++|+
T Consensus 122 ~~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~d~ 201 (433)
T 1z7d_A 122 YDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYDDL 201 (433)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECTTCH
T ss_pred CCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCCCCH
Confidence 9999999999999999998753 245 65555 5567777666665554 35677888999
Q ss_pred HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC----ChHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccc
Q psy15447 197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC----PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEY 271 (457)
Q Consensus 197 ~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~----~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~ 271 (457)
+++++.++. +++++|++||+++++|.+. ++++|+++|++||++||+||+|+ | +|++|.++ .++
T Consensus 202 ~~le~~l~~----------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g-~g~~g~~~~~~~ 269 (433)
T 1z7d_A 202 EALEEELKD----------PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQT-G-LGRTGKLLCVHH 269 (433)
T ss_dssp HHHHHHHTS----------TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-T-TTTTSSSSGGGG
T ss_pred HHHHHHhCC----------CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCcc-C-CCcCCcchhhHh
Confidence 999999852 3568999999999999875 58999999999999999999996 3 55656554 367
Q ss_pred cCCCCCCccEEEecCcccccCc---ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHH
Q psy15447 272 FGVSTEEVDMIIGSLEHALGSV---GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREK 348 (457)
Q Consensus 272 ~~~~~~~~Di~~~s~sK~lg~~---gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~ 348 (457)
+++.| |++ |+||++|+. +|++++++++++.+....+..+| +.+|++++++.++++.+++. ++.++++++
T Consensus 270 ~~~~~---di~--t~sK~l~~G~~~~G~v~~~~~~~~~l~~~~~~~t~--~~~~~~~aaa~aal~~~~~~-~~~~~~~~~ 341 (433)
T 1z7d_A 270 YNVKP---DVI--LLGKALSGGHYPISAVLANDDIMLVIKPGEHGSTY--GGNPLAASICVEALNVLINE-KLCENAEKL 341 (433)
T ss_dssp GTCCC---SEE--EECGGGGTTSSCCEEEEECHHHHTTCCTTCCCCTT--TTCHHHHHHHHHHHHHHHHT-THHHHHHHH
T ss_pred cCCCC---CEE--EECccccCCCCCeEEEEECHHHHhhhccccccccC--CCCHHHHHHHHHHHHHHHhc-cHHHHHHHH
Confidence 77766 676 899999743 78999999988776543333333 46999999999999988764 578999999
Q ss_pred HHHHHHHhhccc-ccCCeEEeccCCCCeEEEEecCC-cchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEE
Q psy15447 349 CNTMHSLLSQHK-VTQRFLVQGHRDTPLKYLYLQKS-DDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRI 426 (457)
Q Consensus 349 ~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi 426 (457)
++++++.|+++. ..+.+... ++.+.++++.+... . ...++++.|+++||++.+.. .+++|+
T Consensus 342 ~~~l~~~L~~l~~~~~~~~~~-~~~g~~~~i~~~~~~~-------~~~~~~~~l~~~Gv~v~~~~---------~~~iRi 404 (433)
T 1z7d_A 342 GGPFLENLKRELKDSKIVRDV-RGKGLLCAIEFKNELV-------NVLDICLKLKENGLITRDVH---------DKTIRL 404 (433)
T ss_dssp HHHHHHHHHHHHTTCTTEEEE-EEETTEEEEEECTTTC-------CHHHHHHHHHHTTEECCEET---------TTEEEE
T ss_pred HHHHHHHHHHHHHhCCCeEEE-EeeeeEEEEEEccChh-------HHHHHHHHHHHCCeEEecCC---------CCEEEE
Confidence 999999998731 12222222 34578888888653 2 34579999999999987642 478999
Q ss_pred EecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 427 TCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 427 ~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+++..+|++|+++++++|+++++++.
T Consensus 405 ~~~~~~t~e~i~~~l~~l~~~l~~~~ 430 (433)
T 1z7d_A 405 TPPLCITKEQLDECTEIIVKTVKFFD 430 (433)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred ECCcCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988764
No 15
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=100.00 E-value=4.5e-42 Score=346.24 Aligned_cols=352 Identities=11% Similarity=0.058 Sum_probs=275.4
Q ss_pred CCceeeecCCCcEEE-E-CCe--eeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHH
Q psy15447 62 SSKYVVDQKSGYIVN-I-NGI--PCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDI 134 (457)
Q Consensus 62 ~~~~~i~~~~g~~~~-~-~G~--~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~l 134 (457)
..|+++++++|.++| . ||| +||||+++ +++|+ +||+|.+|+.++++++++.+ ...+..+...+|+++|
T Consensus 53 ~~~~~~~~~~G~~l~d~~dG~~~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~~~~~~~~~----~~~~~~~~~~~L~e~l 127 (457)
T 3tfu_A 53 VSPVVAVAAHGAWLTLIRDGQPIEVLDAMSSWWTAIHGH-GHPALDQALTTQLRVMNHVM----FGGLTHEPAARLAKLL 127 (457)
T ss_dssp SCCEEEEEEEBTEEEEEETTEEEEEEETTHHHHTCTTCB-TCHHHHHHHHHHHHHCSCCC----SSSEECHHHHHHHHHH
T ss_pred CCCceEEeeecCEEEEccCCCeeEEEECCCcHhhhccCC-CCHHHHHHHHHHHHhccCcc----ccccCCHHHHHHHHHH
Confidence 358899999999999 7 999 99999885 56676 58999999999999865432 1123578899999999
Q ss_pred HhhcC--CCcEEEecccHHHHHHHHHhhcC-------CC--CEEEEeCcccHHHHHHHHhcC-------------CeEEE
Q psy15447 135 ASFMG--LEETALYSFGFSTSASAIAAYVK-------RN--DAVFVDENINFAIQTGLIASR-------------CKVQY 190 (457)
Q Consensus 135 a~~~g--~~~~i~~~sG~~a~~~ai~a~~~-------~g--d~v~~~~~~h~~~~~~~~~~g-------------~~~~~ 190 (457)
+++++ .+++++++||++|++.|++++.. +| ++|..+..+|+.+..++.+++ ..+..
T Consensus 128 a~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (457)
T 3tfu_A 128 VDITPAGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVF 207 (457)
T ss_dssp HHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEE
T ss_pred HHhCCCCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceE
Confidence 99995 56789999999999999988753 33 456667888888777766632 11222
Q ss_pred ecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEec-CCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCccc
Q psy15447 191 FKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEG-VYMNSADICP----LKDILSLRSKYQARIFVDESVSF 258 (457)
Q Consensus 191 ~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~-v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~ 258 (457)
++. +|+++|++.+++.. +++++|++|| +++++|.+.| +++|+++|++||++||+||+|+.
T Consensus 208 ~~~p~~~~~~~d~~~le~~l~~~~--------~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g 279 (457)
T 3tfu_A 208 APQVPRDYDPAYSAAFEAQLAQHA--------GELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATG 279 (457)
T ss_dssp ECCCCSSCCHHHHHHHHHHHHHHG--------GGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred ecCCCcccCHHHHHHHHHHHHhCC--------CCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccC
Confidence 222 47889999997642 4678999999 9999998876 99999999999999999999862
Q ss_pred ccccCCCCc-cccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhh-CC--cceecCCCcHHHHHHHHHH
Q psy15447 259 GTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLS-GS--GYCFSASLPPFLAVAANKA 331 (457)
Q Consensus 259 g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~aaa~a~ 331 (457)
+|++|.+ ..+++++.| |++ ||||++++ +.|++++++++++.+... .. .+..+.+.+|++|++++++
T Consensus 280 --~gr~G~~~a~~~~~~~p---dii--t~sK~l~gG~~~lG~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aa 352 (457)
T 3tfu_A 280 --FGRTGALFAADHAGVSP---DIM--CVGKALTGGYLSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACAVSVAS 352 (457)
T ss_dssp --TTTTSSSSTHHHHTCCC---SEE--EECGGGGTTSSCCEEEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHH
T ss_pred --CccccchhHhHhcCCCc---eEE--EEChhhhCCCcceEEEEEcHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHH
Confidence 3444544 347788876 676 89999964 468999999999988532 11 1223445699999999999
Q ss_pred HHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccc
Q psy15447 332 LHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPS 411 (457)
Q Consensus 332 l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~ 411 (457)
|+.++++ ++.++++++.+++++.|+++...+++... ++.+.++++.+..+. ...++++.|+++||++++.
T Consensus 353 L~~~~~~-~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-r~~G~~~~i~l~~~~-------~~~~~~~~l~~~Gv~v~~~- 422 (457)
T 3tfu_A 353 VELLLGQ-DWRTRITELAAGLTAGLDTARALPAVTDV-RVCGAIGVIECDRPV-------DLAVATPAALDRGVWLRPF- 422 (457)
T ss_dssp HHHHHTS-CHHHHHHHHHHHHHHHHGGGGGSTTEEEE-EECSSCEEEEESSCC-------CHHHHHHHHHHTTEECCCB-
T ss_pred HHHHhhh-HHHHHHHHHHHHHHHHHHHHhcCCCeeee-ecCCeEEEEEECCcc-------cHHHHHHHHHHCCeEEEec-
Confidence 9988654 58899999999999999885434555443 456788888887654 3567999999999998764
Q ss_pred cCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 412 HLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 412 ~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
.+++||+|++.+|++|+++++++|+++++++.
T Consensus 423 ---------~~~lRi~p~~~~t~eei~~~l~~L~~~l~~~~ 454 (457)
T 3tfu_A 423 ---------RNLVYAMPPYICTPAEITQITSAMVEVARLVG 454 (457)
T ss_dssp ---------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred ---------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 37899999999999999999999999998764
No 16
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=100.00 E-value=6.2e-41 Score=338.87 Aligned_cols=363 Identities=14% Similarity=0.102 Sum_probs=272.2
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|.++++ ||++||||+++ +++|++ ||+|.+|+.+++++....+ ....+..+...+|+++|++++
T Consensus 33 ~p~~~~~~~G~~~~d~~G~~~lD~~~~~~~~~lG~~-~p~v~~A~~~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~ 108 (460)
T 3gju_A 33 PTRIMAGGEGVTVWDNNGRKSIDAFAGLYCVNVGYG-RQKIADAIATQAKNLAYYH---AYVGHGTEASITLAKMIIDRA 108 (460)
T ss_dssp CCCCEEEEEBTEEEETTCCEEEETTHHHHTCTTCBC-CHHHHHHHHHHHHHHSCCC---CCTTCCCHHHHHHHHHHHHHS
T ss_pred CceEEEEeeccEEEECCCCEEEECCcchhhccCCCC-CHHHHHHHHHHHHhccccc---cccccCCHHHHHHHHHHHhhC
Confidence 358999999999995 99999999886 556664 8999999999999865432 223457788999999999987
Q ss_pred C--CCcEEEecccHHHHHHHHHhhcC---------CCCEEEEeCcccHHHHHHHHhcCCe------------EEEec---
Q psy15447 139 G--LEETALYSFGFSTSASAIAAYVK---------RNDAVFVDENINFAIQTGLIASRCK------------VQYFK--- 192 (457)
Q Consensus 139 g--~~~~i~~~sG~~a~~~ai~a~~~---------~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~--- 192 (457)
+ .+++++++||++|++.++++++. +.++|+.+..+|+.+..+..+.+.. +..++
T Consensus 109 ~~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 188 (460)
T 3gju_A 109 PKGMSRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPY 188 (460)
T ss_dssp CTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCC
T ss_pred CCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCc
Confidence 4 56788999999999999998763 3345556777888887777765431 23222
Q ss_pred ---CCC------------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447 193 ---HNN------------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVD 253 (457)
Q Consensus 193 ---~~d------------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~D 253 (457)
++| +++|++.+++.. ++++++|++||+++++|.+.| +++|+++|++||++||+|
T Consensus 189 ~~~~~~~g~~~~~~~~~~~~~le~~i~~~~-------~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~D 261 (460)
T 3gju_A 189 YFRRTDRSMSEEQFSQHCADKLEEMILAEG-------PETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVAD 261 (460)
T ss_dssp GGGCSCTTCCHHHHHHHHHHHHHHHHHHHC-------GGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCccccChhHHHHHHHHHHHHHHHhcC-------CCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 243 688888887533 146789999999999998776 999999999999999999
Q ss_pred cCcc-cccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhh-----CCcceecCCCcHHH
Q psy15447 254 ESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLS-----GSGYCFSASLPPFL 324 (457)
Q Consensus 254 Ea~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 324 (457)
|+|+ +|+.|. .+..+++++.| |++ ||||++++ +.|++++++++++.+... ...+..+.+.+|++
T Consensus 262 Ev~~g~gr~g~--~~~~~~~~~~p---di~--t~sK~l~gG~~~lg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~ 334 (460)
T 3gju_A 262 EVVTGFGRLGT--MFGSDHYGIKP---DLI--TIAKGLTSAYAPLSGVIVADRVWQVLVQGSDKLGSLGHGWTYSAHPIC 334 (460)
T ss_dssp CTTTTTTTTSS--SCHHHHHTCCC---SEE--EECGGGTTTSSCCEEEEEEHHHHHHHHHHHHHHCSCSCCCTTTTCHHH
T ss_pred ccccCCCcccc--cchHhhcCCCC---Cee--eeehhhcCCCCCeEEEEECHHHHHHHhcccccccccccCCCCCCCHHH
Confidence 9987 544442 33457788876 666 79999965 348999999999988532 11223344569999
Q ss_pred HHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcc-cccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHH
Q psy15447 325 AVAANKALHLLKANPSLLTKLREKCNTMHSLLSQH-KVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDM 399 (457)
Q Consensus 325 ~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~ 399 (457)
+++++++|+.+++. ++.++++++.+++++.|.+. ...+.+... ++.+.++++.+..+... ........++++.
T Consensus 335 ~aaa~aal~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (460)
T 3gju_A 335 VAAGVANLELIDEM-DLVTNAGETGAYFRAELAKAVGGHKNVGEV-RGDGMLAAVEFVADKDDRVFFDASQKIGPQVATA 412 (460)
T ss_dssp HHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHHTTSTTEEEE-EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-eeeeEEEEEEEccCccccccccchHHHHHHHHHH
Confidence 99999999988664 47888888888888887432 223344433 44577888877643210 0011135678999
Q ss_pred HHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 400 CIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 400 l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
|+++||++++.. ..+++||+|++.+|++|+++++++|+++++++..
T Consensus 413 l~~~Gv~v~~~~--------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 458 (460)
T 3gju_A 413 LAASGVIGRAMP--------QGDILGFAPPLCLTREQADIVVSKTADAVKSVFA 458 (460)
T ss_dssp HHHTTEECEECS--------SSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHCCeEEecCC--------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999988754 1479999999999999999999999999987754
No 17
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=100.00 E-value=8.4e-41 Score=337.80 Aligned_cols=375 Identities=13% Similarity=0.098 Sum_probs=269.6
Q ss_pred CCCCCcccccc--ccCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCccc
Q psy15447 49 EPIVSKAEKFK--DVSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYG 122 (457)
Q Consensus 49 ~~~~~~~~~~~--~~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g 122 (457)
..+|++.+... ....|+++++++|.++++ ||++||||+++ +.+|++ ||+|.+|+.+++++...+++ ...+
T Consensus 16 ~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~~-~p~v~~A~~~~~~~~~~~~~---~~~~ 91 (459)
T 4a6r_A 16 AHHLHPFTDTASLNQAGARVMTRGEGVYLWDSEGNKIIDGMAGLWCVNVGYG-RKDFAEAARRQMEELPFYNT---FFKT 91 (459)
T ss_dssp ------------------CCEEEEEBTEEEETTCCEEEETTHHHHTCTTCBC-CHHHHHHHHHHHHHCSCCCT---TSSS
T ss_pred hhccCCccccccccccCCeeEEEeecCEEEECCCCEEEECCCchhcccCCCC-CHHHHHHHHHHHHhcccccc---cccc
Confidence 34444444322 123578999999999995 99999999875 456664 89999999999998653222 2234
Q ss_pred ChHHHHHHHHHHHhhcC--CCcEEEecccHHHHHHHHHhhcC--------CCC-EEEEeCcccHHHHHHHHhcCC-----
Q psy15447 123 TNVVHLDLENDIASFMG--LEETALYSFGFSTSASAIAAYVK--------RND-AVFVDENINFAIQTGLIASRC----- 186 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g--~~~~i~~~sG~~a~~~ai~a~~~--------~gd-~v~~~~~~h~~~~~~~~~~g~----- 186 (457)
..+...+|+++|+++++ .+++++++||++|++.++++++. +++ +|+.+..+|+.+..+..+.+.
T Consensus 92 ~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 171 (459)
T 4a6r_A 92 THPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHE 171 (459)
T ss_dssp CCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC-
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhcc
Confidence 68899999999999985 56889999999999999998864 344 555677788877766666542
Q ss_pred -------eEEEec--C----C---C--------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHH
Q psy15447 187 -------KVQYFK--H----N---N--------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKD 238 (457)
Q Consensus 187 -------~~~~~~--~----~---d--------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~ 238 (457)
.+..++ . + | +++|++.+++.. ++++++|++||+++++|.+.| +++
T Consensus 172 ~~~~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~~~~le~~i~~~~-------~~~~~~vi~ep~~~~~G~~~~~~~~l~~ 244 (459)
T 4a6r_A 172 QGDLPIPGMAHIEQPWWYKHGKDMTPDEFGVVAARWLEEKILEIG-------ADKVAAFVGEPIQGAGGVIVPPATYWPE 244 (459)
T ss_dssp --CCSCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHC-------GGGEEEEEECSSBTTTTCBCCCTTHHHH
T ss_pred ccCCCCCCCEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHHcC-------CCCEEEEEECCccCCCCcccCCHHHHHH
Confidence 222333 1 2 2 788888887543 146789999999999999887 999
Q ss_pred HHHHHHHcCcEEEEEcCcc-cccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCC-c
Q psy15447 239 ILSLRSKYQARIFVDESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGS-G 313 (457)
Q Consensus 239 i~~l~~~~g~~li~DEa~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~-~ 313 (457)
|+++|++||++||+||+|+ +|+.|. .+..+++++.| |++ ||||++++.+ |++++++++++.+..... .
T Consensus 245 l~~l~~~~~~llI~DEv~~g~gr~G~--~~~~~~~~~~p---di~--t~sK~l~gg~~~lg~v~~~~~i~~~~~~~~~~~ 317 (459)
T 4a6r_A 245 IERICRKYDVLLVADEVICGFGRTGE--WFGHQHFGFQP---DLF--TAAKGLSSGYLPIGAVFVGKRVAEGLIAGGDFN 317 (459)
T ss_dssp HHHHHHHTTCEEEEECTTTTTTTTSS--SSHHHHHTCCC---SEE--EECGGGGTTSSCCEEEEECHHHHHHHHHHCTTH
T ss_pred HHHHHHHcCCEEEEeccccCCCcccc--cchHhhcCCCC---Cee--ehhhhhcCCCCCccceeeCHHHHHHhhcCCCcc
Confidence 9999999999999999986 544442 23457788876 666 7999997543 899999999998863211 1
Q ss_pred ceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHH-HHHHHHHHHh-hcccccCCeEEeccCCCCeEEEEecCCcch----H
Q psy15447 314 YCFSASLPPFLAVAANKALHLLKANPSLLTKLR-EKCNTMHSLL-SQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----V 387 (457)
Q Consensus 314 ~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~-~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~ 387 (457)
...+.+.+|+++++++++|+.++++ ++.++++ ++.+++++.| +.+...+.+... ++.+.++++.+..+... .
T Consensus 318 ~~~t~~~~~~~~aaa~aal~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~ 395 (459)
T 4a6r_A 318 HGFTYSGHPVCAAVAHANVAALRDE-GIVQRVKDDIGPYMQKRWRETFSRFEHVDDV-RGVGMVQAFTLVKNKAKRELFP 395 (459)
T ss_dssp HHHHHCSCHHHHHHHHHHHHHHHHT-CHHHHHHHTHHHHHHHHHHHHHTTCTTEEEE-EEETTEEEEEECSBTTTTBCCS
T ss_pred cCCCCCCCHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EEEEEEEEEEEecCcccccccc
Confidence 1223345999999999999988664 4788888 8888888888 553333444443 45577888877543210 0
Q ss_pred HHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 388 ASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 388 ~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
.......++++.|+++||++++.+ +++||+|++.+|++|+++++++|+++++++.+
T Consensus 396 ~~~~~~~~~~~~l~~~Gv~v~~~g----------~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 451 (459)
T 4a6r_A 396 DFGEIGTLCRDIFFRNNLIMRACG----------DHIVSAPPLVMTRAEVDEMLAVAERCLEEFEQ 451 (459)
T ss_dssp STTHHHHHHHHHHHHTTEECEEET----------TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHCCeEEecCC----------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 011135678999999999998642 78999999999999999999999999887643
No 18
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=100.00 E-value=1.1e-40 Score=335.87 Aligned_cols=361 Identities=13% Similarity=0.095 Sum_probs=259.5
Q ss_pred CCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q psy15447 62 SSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASF 137 (457)
Q Consensus 62 ~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~ 137 (457)
..|+++++++|.++|+ ||++||||+++ +++|+. ||+|.+|+.+++++....+ ...+..+...+|+++|+++
T Consensus 25 ~~p~~~~~g~G~~v~d~~g~~ylD~~~~~~~~~lG~~-~p~v~~A~~~~~~~~~~~~----~~~~~~~~~~~la~~l~~~ 99 (448)
T 3dod_A 25 ENPLIIESGTGIKVKDINGKEYYDGFSSVWLNVHGHR-KKELDDAIKKQLGKIAHST----LLGMTNVPATQLAETLIDI 99 (448)
T ss_dssp HSCCEEEEEEBTEEEETTSCEEEETTHHHHTCSSCBS-CHHHHHHHHHHHTTCSCCC----CSSSEEHHHHHHHHHHHHH
T ss_pred CCCceEEEeeeCEEEECCCCEEEECCcchhhccCCCC-CHHHHHHHHHHHHhccCcc----ccccCCHHHHHHHHHHHHh
Confidence 3588999999999995 99999999874 567775 8999999999998754321 1234678899999999999
Q ss_pred cC--CCcEEEecccHHHHHHHHHhhcC----CC----CEEE-EeCcccHHHHHHHHhcCCe------------EEEecCC
Q psy15447 138 MG--LEETALYSFGFSTSASAIAAYVK----RN----DAVF-VDENINFAIQTGLIASRCK------------VQYFKHN 194 (457)
Q Consensus 138 ~g--~~~~i~~~sG~~a~~~ai~a~~~----~g----d~v~-~~~~~h~~~~~~~~~~g~~------------~~~~~~~ 194 (457)
++ .+++++++||++|++.|++++.. +| |.|+ .+..+|+.+..+..+.+.. +..++.+
T Consensus 100 ~~~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (448)
T 3dod_A 100 SPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIP 179 (448)
T ss_dssp SCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCC
T ss_pred CCCCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCC
Confidence 84 56889999999999999998754 33 5554 5566677776666555422 2233333
Q ss_pred ----------------CHHHHHHHHHhhchhcccCCCCccEEEEEecCC-CCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447 195 ----------------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY-MNSADICP----LKDILSLRSKYQARIFVD 253 (457)
Q Consensus 195 ----------------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~-~~~G~i~~----l~~i~~l~~~~g~~li~D 253 (457)
|+++|++++++.. +++++|++||++ +++|.+.| +++|+++|++||++||+|
T Consensus 180 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~--------~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~D 251 (448)
T 3dod_A 180 YVYRSESGDPDECRDQCLRELAQLLEEHH--------EEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVD 251 (448)
T ss_dssp CCTTSSSCCHHHHHHHHHHHHHHHHHHHG--------GGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEE
T ss_pred ccccCCccchhhhhHHHHHHHHHHHHhCC--------CCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEe
Confidence 3788999987432 467899999999 99998876 999999999999999999
Q ss_pred cCcc-cccccCCCCc-cccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHh---hC--CcceecCCCcHH
Q psy15447 254 ESVS-FGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRL---SG--SGYCFSASLPPF 323 (457)
Q Consensus 254 Ea~~-~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~---~~--~~~~~~~~~~~~ 323 (457)
|+|+ +|+. |.. ..+++++.| |++ ||||++|+ +.|++++++++++.+.. .. ....++.+.+|+
T Consensus 252 Ev~~g~g~~---g~~~a~~~~~~~~---di~--t~sK~l~~G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 323 (448)
T 3dod_A 252 EVATGFGRT---GKMFACEHENVQP---DLM--AAGKGITGGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQL 323 (448)
T ss_dssp CTTTTTTTT---SSSSGGGGGTCCC---SEE--EECGGGGTTSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCTTTTCHH
T ss_pred ccccCCCcc---cchhhhhhcCCCC---CEE--EecccccCCcCceEEEEECHHHHHHhhhccccCCcccccCCCCcCHH
Confidence 9987 4444 443 457788876 565 79999963 44889999999988754 11 112234456999
Q ss_pred HHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHH
Q psy15447 324 LAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDM 399 (457)
Q Consensus 324 ~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~ 399 (457)
++++++++|+.+++. ++.++++++.+++++.|+++...+.+... ++.+.++++.+..+... ........++++.
T Consensus 324 ~~aaa~aal~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (448)
T 3dod_A 324 GCAVALENLALFESE-NIVEQVAEKSKKLHFLLQDLHALPHVGDI-RQLGFMCGAELVRSKETKEPYPADRRIGYKVSLK 401 (448)
T ss_dssp HHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHTTSTTEEEE-EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EeeeEEEEEEEccCcccccccchhhHHHHHHHHH
Confidence 999999999988664 57889999999998888763223333332 34577888887653210 0000013678999
Q ss_pred HHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCCC
Q psy15447 400 CIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQPL 455 (457)
Q Consensus 400 l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~~ 455 (457)
|+++||++.+. .+++||+|++.+|++|+++++++|+++++++...+
T Consensus 402 l~~~Gv~~~~~----------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~~ 447 (448)
T 3dod_A 402 MRELGMLTRPL----------GDVIAFLPPLASTAEELSEMVAIMKQAIHEVTSLE 447 (448)
T ss_dssp HHHTTEECCEE----------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHCCcEEecc----------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHhccc
Confidence 99999998764 27899999999999999999999999998875443
No 19
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=100.00 E-value=2.1e-40 Score=333.10 Aligned_cols=378 Identities=13% Similarity=0.053 Sum_probs=284.7
Q ss_pred hhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEE-ECCeeeEEeecCCc---cCCCCChhhHHHHHHHHHhcC
Q psy15447 36 TINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVN-INGIPCINFATHNY---LSFVENPDIEKCAIDCIDKNG 111 (457)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~-~~G~~~id~~s~~~---l~~~~~p~i~~a~~~~l~~~~ 111 (457)
.+++.+..+++.+.+... ..|+++++++|.+++ .+|++|+||+++.+ +|+ .||++.+++.++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~G~~v~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~ 76 (439)
T 3dxv_A 6 KALYDRDGAAIGNLQKLR--------FFPLAISGGRGARLIEENGRELIDLSGAWGAASLGY-GHPAIVAAVSAAAANPA 76 (439)
T ss_dssp CCHHHHHHHHBCGGGCCC--------SSCCEEEEEEBTEEEETTSCEEEESSTTTTTCTTCB-SCHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHhccCccCC--------CCCceEEEeeeCEEEeCCCCEEEECCCchhhccCCC-CCHHHHHHHHHHHHhcc
Confidence 455666666665544432 157899999999999 59999999999876 666 58999999999998863
Q ss_pred CCCCCCCCcccChHHHHHHHHHHHhhc--CC-CcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhcC
Q psy15447 112 VGSCGPRGFYGTNVVHLDLENDIASFM--GL-EETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIASR 185 (457)
Q Consensus 112 ~~~~~~~~~~g~~~~~~~l~~~la~~~--g~-~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~g 185 (457)
.. ....+..+.+.+++++|++++ +. ++++++++|++|+..++++ +.+++++|+.+..+|+.+..++.+.+
T Consensus 77 ~~----~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~ 152 (439)
T 3dxv_A 77 GA----TILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSG 152 (439)
T ss_dssp CS----CSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC--
T ss_pred Cc----cccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcC
Confidence 21 223457889999999999998 55 6889999999999999987 45677788888889988887776665
Q ss_pred CeE--------------EEecCC----------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hH
Q psy15447 186 CKV--------------QYFKHN----------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LK 237 (457)
Q Consensus 186 ~~~--------------~~~~~~----------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~ 237 (457)
... ..++++ |+++|++.+++.. ++++++|+++|+++++|.+.| ++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-------~~~~~~vi~~p~~~~~G~~~~~~~~l~ 225 (439)
T 3dxv_A 153 HSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVP-------AGSIGAAFIEPIQSDGGLIVPPDGFLR 225 (439)
T ss_dssp -----------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSC-------TTCEEEEEECSSBSTTTSBCCCTTHHH
T ss_pred CCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcC-------CCCEEEEEEccccCCCCCccCCHHHHH
Confidence 432 344554 6899999985321 256789999999999999988 99
Q ss_pred HHHHHHHHcCcEEEEEcCcccccccCCCC-ccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcc
Q psy15447 238 DILSLRSKYQARIFVDESVSFGTLGSTGH-GVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGY 314 (457)
Q Consensus 238 ~i~~l~~~~g~~li~DEa~~~g~~g~~g~-~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~ 314 (457)
+|+++|++||++||+||+|+ | +|++|. +..+++++.| |++ ||||++|+ +.|++++++++++.+......
T Consensus 226 ~l~~l~~~~~~~li~DE~~~-g-~g~~g~~~~~~~~~~~~---di~--s~sK~~~~G~riG~~~~~~~~~~~~~~~~~~- 297 (439)
T 3dxv_A 226 KFADICRAHGILVVCDEVKV-G-LARSGRLHCFEHEGFVP---DIL--VLGKGLGGGLPLSAVIAPAEILDCASAFAMQ- 297 (439)
T ss_dssp HHHHHHHHTTCEEEEECTTT-C-TTTTSSSSGGGGTTCCC---SEE--EECGGGGTTSCCEEEEEEHHHHTSCSSSSCC-
T ss_pred HHHHHHHHcCCEEEEecccc-C-CCcCchhhHHHhcCCCC---CEE--EEcchhcCCcceEEEEECHHHHhhhcCCCcC-
Confidence 99999999999999999996 2 455555 3446777765 666 89999974 348999999988877644333
Q ss_pred eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccc-ccCCeEEeccCCCCeEEEEecCCcch-HHHHHH
Q psy15447 315 CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHK-VTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKL 392 (457)
Q Consensus 315 ~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~ 392 (457)
.+. .+|+++++++++++.+++ +++.++++++.+++++.|+++. ..+.+... ++.+.++++.+..+... ......
T Consensus 298 -~t~-~~~~~~~aa~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 373 (439)
T 3dxv_A 298 -TLH-GNPISAAAGLAVLETIDR-DDLPAMAERKGRLLRDGLSELAKRHPLIGDI-RGRGLACGMELVCDRQSREPARAE 373 (439)
T ss_dssp -TTT-TCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEEEEETTTTEECHHH
T ss_pred -CCc-ccHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEEecCccccCCCHHH
Confidence 333 699999999999998876 4578899999999999887632 12333332 44577888776321100 001125
Q ss_pred HHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 393 LQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 393 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
..++++.|+++||++.+... ..+++||+++..+|++|+++++++|+++++++.
T Consensus 374 ~~~~~~~l~~~Gv~v~~~~~-------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 426 (439)
T 3dxv_A 374 TAKLIYRAYQLGLVVYYVGM-------NGNVLEFTPPLTITETDIHKALDLLDRAFSELS 426 (439)
T ss_dssp HHHHHHHHHHHTEECEEEST-------TSCEEEECCCTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred HHHHHHHHHHCCcEEeecCC-------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 66799999999999987642 247999999999999999999999999998763
No 20
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=100.00 E-value=2.3e-39 Score=326.82 Aligned_cols=362 Identities=12% Similarity=0.082 Sum_probs=269.1
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|.+|++ ||++||||+++ +++|+. ||+|.+|+.+++++.++.+ ..+..+...+|+++|++++
T Consensus 31 ~p~~~~~~~G~~v~d~~g~~~lD~~~~~~~~~lG~~-~p~v~~A~~~~~~~~~~~~-----~~~~~~~~~~la~~l~~~~ 104 (452)
T 3n5m_A 31 STTVGAKAEGCWVEDIQGKRYLDGMSGLWCVNSGYG-RKELAEAAYKQLQTLSYFP-----MSQSHEPAIKLAEKLNEWL 104 (452)
T ss_dssp GCCEEEEEEBTEEEETTCCEEEETTHHHHTCTTCBC-CHHHHHHHHHHHTTCCCCC-----TTSEEHHHHHHHHHHHHHH
T ss_pred CCceEEEeeeCEEEECCCCEEEECCcchhhccCCCC-CHHHHHHHHHHHHhcCCcc-----cccCCHHHHHHHHHHHHhC
Confidence 578999999999994 99999999887 677775 8999999999998854411 2346789999999999998
Q ss_pred CCC-cEEEecccHHHHHHHHHhhc-----C---CCC-EEEEeCcccHHHHHHHHhcCCe------------EEEec----
Q psy15447 139 GLE-ETALYSFGFSTSASAIAAYV-----K---RND-AVFVDENINFAIQTGLIASRCK------------VQYFK---- 192 (457)
Q Consensus 139 g~~-~~i~~~sG~~a~~~ai~a~~-----~---~gd-~v~~~~~~h~~~~~~~~~~g~~------------~~~~~---- 192 (457)
+.+ .+++++||++|++.++++++ . +++ +|+.+..+|+....+..+.+.. ....+
T Consensus 105 ~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (452)
T 3n5m_A 105 GGEYVIFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDC 184 (452)
T ss_dssp TSCEEEEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCT
T ss_pred CCCceEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCcc
Confidence 743 37888899999999999877 3 444 5555666788776666655421 22222
Q ss_pred ----CCC---------HHHHHHHHHhhchhcccCCCCccEEEEEecC-CCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q psy15447 193 ----HNN---------MQHLEELLRQQDERDTLNSKVTKKFIIVEGV-YMNSADICP----LKDILSLRSKYQARIFVDE 254 (457)
Q Consensus 193 ----~~d---------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v-~~~~G~i~~----l~~i~~l~~~~g~~li~DE 254 (457)
++| +++|++.+++.. ++++++|++||+ +| +|.+.| +++|+++|++||++||+||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~le~~l~~~~-------~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DE 256 (452)
T 3n5m_A 185 YRMPGIERENIYDVECVKEVDRVMTWEL-------SETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDE 256 (452)
T ss_dssp TTSTTTTTSCGGGCHHHHHHHHHHHHHC-------GGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEEC
T ss_pred ccCccCCchhhHHHHHHHHHHHHHHhcC-------CCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEec
Confidence 345 899999997322 146789999999 89 998887 9999999999999999999
Q ss_pred Ccc-cccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHh--hCCc--ceecCCCcHHHHH
Q psy15447 255 SVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRL--SGSG--YCFSASLPPFLAV 326 (457)
Q Consensus 255 a~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~a 326 (457)
+|+ +|+.|. .+..+++++.| |++ ||||++|+ +.|++++++++++.+.. .... +..+.+.+|++++
T Consensus 257 v~~g~g~~g~--~~~~~~~~~~~---di~--t~sK~l~~G~~~ig~~~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~a 329 (452)
T 3n5m_A 257 VICGFGRTGK--AFGFMNYDVKP---DII--TMAKGITSAYLPLSATAVKREIYEAFKGKGEYEFFRHINTFGGNPAACA 329 (452)
T ss_dssp TTTTTTTTSS--SSGGGGTTCCC---SEE--EECGGGGTTSSCCEEEEEEHHHHGGGCSSSTTCSCCCCCSSTTCHHHHH
T ss_pred chhCCCcccc--cchhhhcCCCC---CEE--eecccccCCCcceEEEEECHHHHHHHhhccCCCCccccCCCCCCHHHHH
Confidence 986 544432 23457788876 666 79999975 22899999999888743 1111 2234456999999
Q ss_pred HHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcc-cccCCeEEeccCCCCeEEEEecCCcch--HHHHHHHHHHHHHHHHc
Q psy15447 327 AANKALHLLKANPSLLTKLREKCNTMHSLLSQH-KVTQRFLVQGHRDTPLKYLYLQKSDDE--VASKKLLQTICDMCIQA 403 (457)
Q Consensus 327 aa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~ 403 (457)
+++++++.+++. ++.++++++.+++++.|+++ ...+.+... ++.+.++++.+..+... ........++++.|+++
T Consensus 330 aa~aal~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~ 407 (452)
T 3n5m_A 330 LALKNLEIIENE-NLIERSAQMGSLLLEQLKEEIGEHPLVGDI-RGKGLLVGIELVNDKETKEPIDNDKIASVVNACKEK 407 (452)
T ss_dssp HHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHHTTCTTEEEE-EESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EEEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHC
Confidence 999999988664 57899999999999988763 123344333 45677777766432110 00011345789999999
Q ss_pred CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 404 GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 404 Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
||++.+..++. +...+++||+|+..+|++|+++++++|++++++
T Consensus 408 Gv~~~~~~~~~---~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 408 GLIIGRNGMTT---AGYNNILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp TEECEECTTSS---TTCCCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred CcEEeecCccc---CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 99999876542 233689999999999999999999999998753
No 21
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=1.7e-39 Score=327.33 Aligned_cols=384 Identities=14% Similarity=0.105 Sum_probs=278.1
Q ss_pred hhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcC
Q psy15447 36 TINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNG 111 (457)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~ 111 (457)
++++.+...+..+.++.. ..|+++++++|.+||+ ||++||||+++ +++|+. ||+|.+|+.+++++..
T Consensus 27 ~~~~~~~~~~~~~~~~~~--------~~p~~~~~~~G~~v~d~~G~~ylD~~~~~~~~~lGh~-~p~v~~A~~~~~~~~~ 97 (453)
T 4ffc_A 27 SGALAERRRAAVSAGVGS--------TAPVYAVDADGGVIVDADGNSFIDLGAGIAVTTVGAS-HPAVAAAIADQATHFT 97 (453)
T ss_dssp HHHHHHHHHHHBCTTTCC--------SCSSCEEEEETTEEEETTSCEEEESSHHHHTCTTCTT-CHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHhcCCCcCC--------CCCceEEeeecCEEEeCCCCEEEEcCCCcccCcCCCC-CHHHHHHHHHHHHhcc
Confidence 445555555554544431 2578899999999995 99999999885 456664 8999999999999853
Q ss_pred CCCCCCCCcccChHHHHHHHHHHHhhcC---CCcEEEecccHHHHHHHHHhhc---CCCCEEEEeCcccHHHHHHHHhcC
Q psy15447 112 VGSCGPRGFYGTNVVHLDLENDIASFMG---LEETALYSFGFSTSASAIAAYV---KRNDAVFVDENINFAIQTGLIASR 185 (457)
Q Consensus 112 ~~~~~~~~~~g~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~ai~a~~---~~gd~v~~~~~~h~~~~~~~~~~g 185 (457)
.. ....+..+...+|+++|+++++ .+++++++||++|++.|++... ++.++|+.+..+|+.+..+..+.+
T Consensus 98 ~~----~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~ 173 (453)
T 4ffc_A 98 HT----CFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTA 173 (453)
T ss_dssp CC----TTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCC
T ss_pred cc----ccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcC
Confidence 21 1223468889999999999986 4578999999999999998764 455667778888988877777654
Q ss_pred C-------------eEEEecCC----C------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHH
Q psy15447 186 C-------------KVQYFKHN----N------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKD 238 (457)
Q Consensus 186 ~-------------~~~~~~~~----d------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~ 238 (457)
. .+..++.+ | .+.++..++...... .++++++|++||+++++|.+.| +++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i---~~~~~aavi~ep~~~~gG~~~~~~~~l~~ 250 (453)
T 4ffc_A 174 KSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQI---GAQSLAAIIIEPIQGEGGFIVPAPGFLAT 250 (453)
T ss_dssp CCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHT---CGGGEEEEEECSSBTTTTSBCCCTTHHHH
T ss_pred CCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhc---CCCCEEEEEEcCCCCCCCcccCCHHHHHH
Confidence 3 34444443 3 344433332211100 0146789999999999898877 999
Q ss_pred HHHHHHHcCcEEEEEcCcc-cccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcce
Q psy15447 239 ILSLRSKYQARIFVDESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYC 315 (457)
Q Consensus 239 i~~l~~~~g~~li~DEa~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~ 315 (457)
|+++|++||++||+||+|+ +|+.|. .+..+++++.| |++ ||||++|+ +.|++++++++++.+....+..
T Consensus 251 l~~l~~~~~~llI~DEv~~g~g~~g~--~~a~~~~~~~p---di~--t~sK~~~~G~~~G~~~~~~~i~~~~~~~~~~~- 322 (453)
T 4ffc_A 251 LTAWASENGVVFIADEVQTGFARTGA--WFASEHEGIVP---DIV--TMAKGIAGGMPLSAVTGRAELMDAVYAGGLGG- 322 (453)
T ss_dssp HHHHHHHHTCEEEEECTTTTTTTTSS--SSTHHHHTCCC---SEE--EECGGGGTTSSCEEEEEEHHHHTTSCTTSSCC-
T ss_pred HHHHHHHcCCEEEEecCccCCCcccc--cchhhhcCCCc---chH--hhhhhhcCCcCeEEEEECHHHHhhhcccCcCC-
Confidence 9999999999999999986 544442 23457788876 665 79999965 4489999999988776544333
Q ss_pred ecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccc-ccCCeEEeccCCCCeEEEEecCCcchHHHHHHHH
Q psy15447 316 FSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHK-VTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQ 394 (457)
Q Consensus 316 ~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 394 (457)
+.+.+|+++++++++++.+++. ++.++++++.+++++.|+++. ..+.+... ++.+.++++.+..............
T Consensus 323 -t~~~~~~~~aaa~aal~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 399 (453)
T 4ffc_A 323 -TYGGNPVTCAAAVAALGVMREL-DLPARARAIEASVTSRLSALAEEVDIIGEV-RGRGAMLAIEIVKPGTLEPDAALTK 399 (453)
T ss_dssp -SSSSCHHHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHHHHCSSEEEE-EEETTEEEEEEBCTTSCCBCHHHHH
T ss_pred -CCCcCHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHHHHHHHHhhCCCeEEE-EeeceEEEEEEecCcccCCCHHHHH
Confidence 3345999999999999988654 578899999999988887631 12344332 3457888888754110011122567
Q ss_pred HHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 395 TICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 395 ~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
++.+.|+++||++.+... ..+++||++++.+|++|+++++++|+++++++.+
T Consensus 400 ~~~~~l~~~Gv~v~~~~~-------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 451 (453)
T 4ffc_A 400 SIAAEALSQGVLILTCGT-------FGNVIRLLPPLVIGDDLLDEGITALSDIIRAKAS 451 (453)
T ss_dssp HHHHHHHHTTEECCEECT-------TSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHhCCCEEecCCC-------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999987542 2479999999999999999999999999987653
No 22
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=100.00 E-value=2.8e-39 Score=325.78 Aligned_cols=378 Identities=13% Similarity=0.113 Sum_probs=276.0
Q ss_pred hhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcC
Q psy15447 36 TINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNG 111 (457)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~ 111 (457)
++++.+..++..+.++.. ..|+++++++|.+||+ ||++||||+++ +.+|+. ||+|.+|+.+++++..
T Consensus 24 ~~~~~~~~~~~~~~~~~~--------~~p~~~~~g~G~~v~d~~g~~ylD~~~~~~~~~lGh~-~p~v~~A~~~~~~~~~ 94 (451)
T 3oks_A 24 SQALIDRKGTAVARGVGT--------TMPVYAVRAGGGIVEDVDGNRLIDLGSGIAVTTVGNS-APKVVEAVRSQVGDFT 94 (451)
T ss_dssp HHHHHHHHHHHBCTTBCC--------SCSSCEEEEETTEEEETTSCEEEESSHHHHTCTTCTT-CHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhhccCCcCC--------CCCceEEEeecCEEEECCCCEEEEcCCCccccccCCC-CHHHHHHHHHHHHhcc
Confidence 445555555555544331 2578899999999995 99999999875 446654 8999999999998753
Q ss_pred CCCCCCCCcccChHHHHHHHHHHHhhcC---CCcEEEecccHHHHHHHHHhhc---CCCCEEEEeCcccHHHHHHHHhcC
Q psy15447 112 VGSCGPRGFYGTNVVHLDLENDIASFMG---LEETALYSFGFSTSASAIAAYV---KRNDAVFVDENINFAIQTGLIASR 185 (457)
Q Consensus 112 ~~~~~~~~~~g~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~ai~a~~---~~gd~v~~~~~~h~~~~~~~~~~g 185 (457)
+. ....+..+...+|+++|+++++ .+++++++||++|++.|++... ++..+|..+..+|+.+..++.+.+
T Consensus 95 ~~----~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~ 170 (451)
T 3oks_A 95 HT----CFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTA 170 (451)
T ss_dssp CC----TTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCC
T ss_pred cc----cCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcC
Confidence 21 1123467889999999999986 4578999999999999998764 444566677888988877777654
Q ss_pred C-------------eEEEecCC------------------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC
Q psy15447 186 C-------------KVQYFKHN------------------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC 234 (457)
Q Consensus 186 ~-------------~~~~~~~~------------------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~ 234 (457)
. .+..++.+ +++.+++.+++... ++++++|++||+++++|.+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~------~~~~aavi~ep~~~~gG~~~ 244 (451)
T 3oks_A 171 KVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIG------ADNLAAVVIEPIQGEGGFIV 244 (451)
T ss_dssp CCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTC------GGGEEEEEECSSBTTTTCBC
T ss_pred CCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcC------CCCEEEEEEcCCcCCCCccC
Confidence 2 34555544 13334444443211 24678999999999999887
Q ss_pred C----hHHHHHHHHHcCcEEEEEcCcc-cccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHH
Q psy15447 235 P----LKDILSLRSKYQARIFVDESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHH 307 (457)
Q Consensus 235 ~----l~~i~~l~~~~g~~li~DEa~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~ 307 (457)
| +++|+++|++||++||+||+|+ +|+.|. .+..+++++.| |++ ||||++|+ +.|++++++++++.+
T Consensus 245 ~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~--~~~~~~~~~~p---di~--t~sK~l~~G~~iG~v~~~~~~~~~~ 317 (451)
T 3oks_A 245 PADGFLPTLLDWCRKNDVVFIADEVQTGFARTGA--MFACEHEGIDP---DLI--VTAKGIAGGLPLSAVTGRAEIMDSP 317 (451)
T ss_dssp CCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSGGGGGTCCC---SEE--EECGGGGTTSSCEEEEEEHHHHTCS
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEecccCCCcccc--chhhhhcCCCC---Cee--eehhhhhCCcceEEEEECHHHHhhh
Confidence 7 9999999999999999999986 444432 23457788876 666 89999964 458999999998877
Q ss_pred HhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccc-ccCCeEEeccCCCCeEEEEecCCcch
Q psy15447 308 RLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHK-VTQRFLVQGHRDTPLKYLYLQKSDDE 386 (457)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~ 386 (457)
....+. .+.+.+|+++++++++++.+++. ++.++++++.+++++.|+++. ..+.+... ++.+.++++.+......
T Consensus 318 ~~~~~~--~t~~~~~~~~aaa~aal~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~ 393 (451)
T 3oks_A 318 HVSGLG--GTYGGNPIACAAALATIETIESE-GLVARAQQIEKIMKDRLGRLQAEDDRIGDV-RGRGAMIAMELVKAGTT 393 (451)
T ss_dssp CTTSBC--CSSSSCHHHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEEBSTTSC
T ss_pred cCCCcC--CCCCCCHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHhhCCCeEEE-EEeeEEEEEEEecCccC
Confidence 544333 33456999999999999988664 588899999999998887631 12333332 34577888887541100
Q ss_pred HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 387 VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 387 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
........++++.|+++||++.+... ..+++||++++.+|++++++++++|++++++
T Consensus 394 ~~~~~~~~~~~~~l~~~Gv~v~~~~~-------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 394 EPDADLTKALCAGAHAAGVIVLSCGT-------YGNVVRFLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp CBCHHHHHHHHHHHHHTTEECEEECT-------TSCEEEECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHhCCcEEecCCC-------CCCEEEEECCCCCCHHHHHHHHHHHHHHHhh
Confidence 01122567899999999999987542 2478999999999999999999999998763
No 23
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2.2e-39 Score=321.11 Aligned_cols=344 Identities=15% Similarity=0.146 Sum_probs=267.2
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|.++| .||++||||+++ +++|+ +||++.+++.+++++..+++. .+..+.+.++++++++++
T Consensus 18 ~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~la~~~ 91 (395)
T 3nx3_A 18 FDIVLEKGQGVYLFDDKAKKYLDFSSGIGVCALGY-NHAKFNAKIKAQVDKLLHTSN-----LYYNENIAAAAKNLAKAS 91 (395)
T ss_dssp CSCBEEEEEBTEEEETTCCEEEESSHHHHTCTTCB-SCHHHHHHHHHHHTTCSCCCT-----TSBCHHHHHHHHHHHHHH
T ss_pred CCceEEeeeeeEEEECCCCEEEECCCcHHhccCCC-CCHHHHHHHHHHHHhcccccc-----ccCCHHHHHHHHHHHHhc
Confidence 57889999999999 499999999987 45566 489999999999987654321 135788999999999999
Q ss_pred CCCcEEEecccHHHHHHHHHhhc-------CCCCEEE-EeCcccHHHHHHHHhcC------------CeEEEecCCCHHH
Q psy15447 139 GLEETALYSFGFSTSASAIAAYV-------KRNDAVF-VDENINFAIQTGLIASR------------CKVQYFKHNNMQH 198 (457)
Q Consensus 139 g~~~~i~~~sG~~a~~~ai~a~~-------~~gd~v~-~~~~~h~~~~~~~~~~g------------~~~~~~~~~d~~~ 198 (457)
|.+++++++||++|+..+++++. .+++.|+ .+..+|+....+....+ ..+..++++|+++
T Consensus 92 ~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 171 (395)
T 3nx3_A 92 ALERVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYNDISS 171 (395)
T ss_dssp TCSEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTTCHHH
T ss_pred CCCeEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCCCHHH
Confidence 99999999999999999998764 2345554 55666776655554443 4677888999999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcc-cccccCCCCccccccC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVS-FGTLGSTGHGVTEYFG 273 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~-~g~~g~~g~~~~~~~~ 273 (457)
|++.++ +++++|+++++++++|.+.| +++|+++|++||++||+||+|+ +|..|. .+..++++
T Consensus 172 l~~~l~-----------~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~--~~~~~~~~ 238 (395)
T 3nx3_A 172 VEKLVN-----------EKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGK--FFAYEHAQ 238 (395)
T ss_dssp HHTTCC-----------TTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGGGGT
T ss_pred HHHhcc-----------CCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCc--chhHHhcC
Confidence 998874 35689999999999999977 9999999999999999999986 544432 22346677
Q ss_pred CCCCCccEEEecCcccccC--cccEEEecHHH-HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Q psy15447 274 VSTEEVDMIIGSLEHALGS--VGGFCVGSSYI-IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCN 350 (457)
Q Consensus 274 ~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~ 350 (457)
+.+ |++ |+||++|+ +.|++++++++ ++.+....+..++ +.++++++++.++++.+++. ++.++++++.+
T Consensus 239 ~~~---d~~--t~sK~~~~G~~~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~aa~aal~~~~~~-~~~~~~~~~~~ 310 (395)
T 3nx3_A 239 ILP---DIM--TSAKALGCGLSVGAFVINQKVASNSLEAGDHGSTY--GGNPLVCAGVNAVFEIFKEE-KILENVNKLTP 310 (395)
T ss_dssp CCC---SEE--EECGGGTTTSCCEEEEECHHHHHHHSCTTCCSSCB--SCCHHHHHHHHHHHHHHHHT-THHHHHHHHHH
T ss_pred CCC---CEE--EecccccCCCceEEEEEchhhhhhhcCCcccCCCC--CCCHHHHHHHHHHHHHHHhh-HHHHHHHHHHH
Confidence 765 565 79999964 45899999988 7777544333333 45999999999999987653 57888888888
Q ss_pred HHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEec
Q psy15447 351 TMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCN 429 (457)
Q Consensus 351 ~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~ 429 (457)
++++.|++... .+.+... ++.+.++++.+.... ...++.+.|+++||++++.. .+++||+|+
T Consensus 311 ~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~-------~~~~~~~~l~~~Gi~v~~~~---------~~~iRi~~~ 373 (395)
T 3nx3_A 311 YLEQSLDELINEFDFCKKR-KGLGFMQGLSLDKSV-------KVAKVIQKCQENALLLISCG---------ENDLRFLPP 373 (395)
T ss_dssp HHHHHHHHHHHHCTTEEEE-EEETTEEEEEECTTS-------CHHHHHHHHHHTTEECEEET---------TTEEEECCC
T ss_pred HHHHHHHHHHHhCCCeEEE-EeEEEEEEEEeCCcc-------hHHHHHHHHHHCCCEEecCC---------CCEEEEECC
Confidence 88888876321 2333332 345788888887643 35678999999999988653 479999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q psy15447 430 ISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 430 ~~~t~edi~~~~~~l~~~~~~ 450 (457)
..+|++|+++++++|++++++
T Consensus 374 ~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 374 LILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp TTCCHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999998764
No 24
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=100.00 E-value=2e-38 Score=317.88 Aligned_cols=366 Identities=14% Similarity=0.093 Sum_probs=256.9
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|.++|. ||++||||+++ +++|++ +|++.+|+.+++++....+. ..+..+...+++++|++++
T Consensus 11 ~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~~~~~----~~~~~~~~~~l~~~la~~~ 85 (430)
T 3i4j_A 11 PYPVAVRGEGVFLYDDAGRRYLDGSSGALVANIGHG-RAEVGERMAAQAARLPFVHG----SQFSSDVLEEYAGRLARFV 85 (430)
T ss_dssp CCCEEEEEEBTEEEETTSCEEEETTHHHHTCTTCBC-CHHHHHHHHHHHHHCCCCCT----TTCEEHHHHHHHHHHHHHT
T ss_pred CCceEEeeecCEEEECCCCEEEECCCchhccccCCC-CHHHHHHHHHHHHhcccccc----cccCCHHHHHHHHHHHHhC
Confidence 578999999999995 99999999884 677775 89999999999988543221 2346788999999999998
Q ss_pred C--CCcEEEecccHHHHHHHHHhhc--------CCCCEEEE-eCcccHHHHHHHHhcCC--------------eEEEecC
Q psy15447 139 G--LEETALYSFGFSTSASAIAAYV--------KRNDAVFV-DENINFAIQTGLIASRC--------------KVQYFKH 193 (457)
Q Consensus 139 g--~~~~i~~~sG~~a~~~ai~a~~--------~~gd~v~~-~~~~h~~~~~~~~~~g~--------------~~~~~~~ 193 (457)
+ .+++++++||++|+..++++++ ..++.|++ +..+|+.........+. .+..++.
T Consensus 86 ~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (430)
T 3i4j_A 86 GLPTFRFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPK 165 (430)
T ss_dssp TCTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECC
T ss_pred CCCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCC
Confidence 6 4678889999999999998875 23555554 55566665544444332 3334444
Q ss_pred C--------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCC-CCCCCCC----hHHHHHHHHHcCcEEEEEcCcc-cc
Q psy15447 194 N--------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM-NSADICP----LKDILSLRSKYQARIFVDESVS-FG 259 (457)
Q Consensus 194 ~--------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~-~~G~i~~----l~~i~~l~~~~g~~li~DEa~~-~g 259 (457)
+ |+++|++.+++.. ++++++|++||+++ ++|.+.+ +++|+++|++||++||+||+|+ +|
T Consensus 166 ~~~~~~~~~~~~~le~~l~~~~-------~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~ 238 (430)
T 3i4j_A 166 PDPARNGAEDAEGLRALLEREG-------PETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMG 238 (430)
T ss_dssp CCTTSCHHHHHTHHHHHHHHHC-------GGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred CcccchhhHHHHHHHHHHHhcC-------CCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence 4 4589999987542 14678999999999 9998877 9999999999999999999986 54
Q ss_pred cccCCCCcccccc-CCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCc--ceecCCCcHHHHHHHHHHHH
Q psy15447 260 TLGSTGHGVTEYF-GVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSG--YCFSASLPPFLAVAANKALH 333 (457)
Q Consensus 260 ~~g~~g~~~~~~~-~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aaa~a~l~ 333 (457)
..|. .+..+++ ++.| |++ ||||++|+ +.|++++++++++.+...... ...+.+.+|+++++++++|+
T Consensus 239 ~~g~--~~~~~~~~~~~~---di~--t~sK~l~~G~~r~G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 311 (430)
T 3i4j_A 239 RCGS--PLALSRWSGVTP---DIA--VLGKGLAAGYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLD 311 (430)
T ss_dssp TTSS--SSGGGGTTTCCC---SEE--EECGGGTTTSSCCEEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHH
T ss_pred cccc--hhhhhhhcCCCC---cEE--EEcccccCCccccEEEEECHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHH
Confidence 4442 2345667 7765 565 79999974 238999999999998764211 12334569999999999999
Q ss_pred HHhhCcHHHHHHHHHHHHHHHHhhccc-ccCCeEEeccCCCCeEEEEecCCcchHH-H-HHHHHHHHHHHHHcCeeEecc
Q psy15447 334 LLKANPSLLTKLREKCNTMHSLLSQHK-VTQRFLVQGHRDTPLKYLYLQKSDDEVA-S-KKLLQTICDMCIQAGFAITCP 410 (457)
Q Consensus 334 ~~~~~~~~~~~l~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~-~~~~~~~~~~l~~~Gi~v~~~ 410 (457)
.+++. ++.++++++.+++++.|+++. ..+++... ++.+.++++.+.+...... . ...+.++++.|+++||++++.
T Consensus 312 ~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~ 389 (430)
T 3i4j_A 312 IVERE-DLTGAAKERGAQLLAGLQALQARFPQMMQV-RGTGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPG 389 (430)
T ss_dssp HHHHT-THHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEEC------------CHHHHHHHHHHTTEECC--
T ss_pred HHHcc-cHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEec
Confidence 88663 578889999999888887632 13445443 3457788887753210000 0 012367899999999999876
Q ss_pred ccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 411 SHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 411 ~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
.++.. ...++++||++++.+|++++++++++|+++++++
T Consensus 390 ~~~~~--~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 390 SGAEP--NGRGDHLLLGPPLSITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp -----------CEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccC--CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 43221 2235789999999999999999999999998865
No 25
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=7e-39 Score=321.57 Aligned_cols=382 Identities=16% Similarity=0.175 Sum_probs=278.4
Q ss_pred hhhHHHHHcccCCCCCCCccccccc-c-CCceeeecCCCcEEEE-CCeeeEEeecCC---ccCCCCChhhHHHHHHHHHh
Q psy15447 36 TINVDALINNWTPEPIVSKAEKFKD-V-SSKYVVDQKSGYIVNI-NGIPCINFATHN---YLSFVENPDIEKCAIDCIDK 109 (457)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~i~~~~g~~~~~-~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~ 109 (457)
++++.+...+..|.+..++...... . ..|+++++++|.++|+ ||++||||+++. ++|+ +||+|.+|+.+++.+
T Consensus 8 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~-~~p~v~~a~~~~~~~ 86 (434)
T 3l44_A 8 SEALHKEALEHIVGGVNSPSRSFKAVGGGAPIAMERGKGAYFWDVDGNKYIDYLAAYGPIITGH-AHPHITKAITTAAEN 86 (434)
T ss_dssp HHHHHHHHHHHBGGGCSSGGGSSGGGTCSCCCCEEEEEBTEEEETTCCEEEECCGGGTTCSSCB-TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCcCccccccccccCCCCceEEEeecCEEEECCCCEEEECCCchhccccCC-CCHHHHHHHHHHHHh
Confidence 5677777777777776544332221 1 3688999999999995 999999998864 4555 489999999999987
Q ss_pred cCCCCCCCCCcccChHHHHHHHHHHHhhc-CCCcEEEecccHHHHHHHHHhhcC--CCCEE-EEeCcccHHHHHHHHhcC
Q psy15447 110 NGVGSCGPRGFYGTNVVHLDLENDIASFM-GLEETALYSFGFSTSASAIAAYVK--RNDAV-FVDENINFAIQTGLIASR 185 (457)
Q Consensus 110 ~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~~~i~~~sG~~a~~~ai~a~~~--~gd~v-~~~~~~h~~~~~~~~~~g 185 (457)
. .. +++..+...+|+++|++++ +.+++++++||++|+..+++++.. +++.| +.+..+|+.+...+...+
T Consensus 87 ~-~~------~~~~~~~~~~l~~~la~~~~~~~~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g 159 (434)
T 3l44_A 87 G-VL------YGTPTALEVKFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAG 159 (434)
T ss_dssp C-SC------CSSCCHHHHHHHHHHHHHCTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC--
T ss_pred C-cC------CCCCCHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcC
Confidence 3 11 1235778899999999988 567889999999999999987653 44544 456666765443322222
Q ss_pred -------------------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHH
Q psy15447 186 -------------------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSL 242 (457)
Q Consensus 186 -------------------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l 242 (457)
..+..++++|++++++++++.. +++++|++||+++++|.+.| +++|+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~--------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l 231 (434)
T 3l44_A 160 SGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWG--------HEVAAILVEPIVGNFGIVEPKPGFLEKVNEL 231 (434)
T ss_dssp -----CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHG--------GGEEEEEECSSBCTTSCBCCCTTHHHHHHHH
T ss_pred CcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCC--------CCEEEEEEcCCCCCCCCccCCHHHHHHHHHH
Confidence 1566788899999999997643 46789999999999999987 9999999
Q ss_pred HHHcCcEEEEEcCcccccccCCCC-ccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCc-ceecC
Q psy15447 243 RSKYQARIFVDESVSFGTLGSTGH-GVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSG-YCFSA 318 (457)
Q Consensus 243 ~~~~g~~li~DEa~~~g~~g~~g~-~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~-~~~~~ 318 (457)
|++||++||+||+|+..+ +|. +..+++++.| |++ |+||++|+ +.|++++++++++.+...... ...+.
T Consensus 232 ~~~~~illI~DEv~~g~~---~g~~~~~~~~~~~~---di~--t~sK~~~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~ 303 (434)
T 3l44_A 232 VHEAGALVIYDEVITAFR---FMYGGAQDLLGVTP---DLT--ALGKVIGGGLPIGAYGGKKEIMEQVAPLGPAYQAGTM 303 (434)
T ss_dssp HHTTTCEEEEECTTTTTT---SSSSCHHHHHTCCC---SEE--EEEGGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTT
T ss_pred HHHcCCEEEEecccccee---ccccHHHHHcCCCC---Cee--ehhhhhcCCcCeeeEEEcHHHHHhhccCCCcccCCCC
Confidence 999999999999996423 333 3357788876 555 89999963 348899999998877542211 12234
Q ss_pred CCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch------HHHHHH
Q psy15447 319 SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE------VASKKL 392 (457)
Q Consensus 319 ~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~ 392 (457)
+.+|+++++++++++.+++ +++.++++++.+++++.|+++....++....++.+.++++.+...... ......
T Consensus 304 ~~~~~a~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (434)
T 3l44_A 304 AGNPASMASGIACLEVLQQ-EGLYEKLDELGATLEKGILEQAAKHNIDITLNRLKGALTVYFTTNTIEDYDAAQDTDGEM 382 (434)
T ss_dssp TTCHHHHHHHHHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEETTEEEEEESSSCCCSHHHHHHSCHHH
T ss_pred CcCHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEeeccEEEEEEecCcccchhhccccCHHH
Confidence 5699999999999998865 468899999999999988763211222111234577888877432100 011224
Q ss_pred HHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 393 LQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 393 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
..++.+.|+++||++++.. .+.+|+ +..+|++|+++++++|+++++++..
T Consensus 383 ~~~~~~~l~~~Gv~v~~~~---------~~~~rl--~~~~t~e~i~~~l~~l~~~l~~~~~ 432 (434)
T 3l44_A 383 FGKFFKLMLQEGVNLAPSK---------YEAWFL--TTEHTKEDIEYTIEAVGRAFAALAD 432 (434)
T ss_dssp HHHHHHHHHHTTEECCSST---------TCCEEC--CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCeEEeecC---------CCcEEE--ecccCHHHHHHHHHHHHHHHHHHHh
Confidence 5678999999999988754 256777 4678999999999999999987643
No 26
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=100.00 E-value=7e-39 Score=321.57 Aligned_cols=381 Identities=17% Similarity=0.191 Sum_probs=278.8
Q ss_pred hhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcC
Q psy15447 36 TINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNG 111 (457)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~ 111 (457)
++++.+..++..+.++.++..... ...|+++++++|+++|+ ||++||||+++ +++|+ .||++.+++.+++++ +
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~-~~~~v~~a~~~~~~~-~ 88 (434)
T 2epj_A 12 SRMLFERTKELFPGGVNSPVRAAV-KPYPFYVKRGEGAYLYTVDGARIVDLVLAYGPLILGH-KHPRVLEAVEEALAR-G 88 (434)
T ss_dssp HHHHHHHHTTTSGGGSSSGGGGGC-SSSCCCEEEEEBTEEEETTCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHT-C
T ss_pred hHHHHHHHHhhcCCCcCccccccc-CCCCeeEEeeecCEEEECCCCEEEEcccchhcccCCC-CCHHHHHHHHHHHHh-C
Confidence 456666676666655543322210 12488999999999995 99999999886 46677 589999999999987 3
Q ss_pred CCCCCCCCcccChHHHHHHHHHHHhhc-CCCcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHh----
Q psy15447 112 VGSCGPRGFYGTNVVHLDLENDIASFM-GLEETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIA---- 183 (457)
Q Consensus 112 ~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~---- 183 (457)
..+ .+..+...+++++|++++ +.+.+++++||++|+..++++ +.+++++|+.+..+|+.....+..
T Consensus 89 ~~~------~~~~~~~~~l~~~la~~~~~~~~v~~~~sgseA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~ 162 (434)
T 2epj_A 89 WLY------GAPGEAEVLLAEKILGYVKRGGMIRFVNSGTEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSA 162 (434)
T ss_dssp SCC------SSCCHHHHHHHHHHHHHHCTTCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC--
T ss_pred CCC------CCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCC
Confidence 221 125778899999999999 788899999999999999987 677777777787788754322211
Q ss_pred ---------cCC------eEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHH
Q psy15447 184 ---------SRC------KVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRS 244 (457)
Q Consensus 184 ---------~g~------~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~ 244 (457)
.|. .+..++++|++++++.+++.. +++++|++||+++++|.+.| +++|+++|+
T Consensus 163 ~~~~~~p~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~--------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~ 234 (434)
T 2epj_A 163 AAHYGVPTSAGVPEAVARLTLVTPYNDVEALERVFAEYG--------DRIAGVIVEPVIANAGVIPPRREFLAALQRLSR 234 (434)
T ss_dssp ----CEESSTTCCHHHHTTEEEEETTCHHHHHHHHHHHG--------GGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCCcccCceEecCCCCHHHHHHHHHhCC--------CCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHH
Confidence 132 467788899999999997532 35789999999999999888 999999999
Q ss_pred HcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcce-ecCCCc
Q psy15447 245 KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYC-FSASLP 321 (457)
Q Consensus 245 ~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~-~~~~~~ 321 (457)
+||++||+||+|+..+.|. .+..+++++.| |++ |+||++|+ ++|++++++++++.+......+. .+.+.+
T Consensus 235 ~~g~~lI~DEv~~g~~~g~--~~~~~~~~~~~---di~--s~sK~l~~G~~~G~v~~~~~~~~~l~~~~~~~~~~t~~~~ 307 (434)
T 2epj_A 235 ESGALLILDEVVTGFRLGL--EGAQGYFNIEG---DII--VLGKIIGGGFPVGAVAGSREVMSLLTPQGKVFNAGTFNAH 307 (434)
T ss_dssp HHTCEEEEEETTTTTTSST--THHHHHHTCCC---SEE--EEEGGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTTTTC
T ss_pred HcCCEEEEEcchhceeCCc--chhhHHhCCCC---Cee--eecchhcCCcceeeeeecHHHHHhhccCCCcccCCCCCcC
Confidence 9999999999998223332 23446677766 665 89999975 67999999998877654221111 233569
Q ss_pred HHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch------HHHHHHHHH
Q psy15447 322 PFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE------VASKKLLQT 395 (457)
Q Consensus 322 ~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~ 395 (457)
|++++++.++++.+++ +++.++++++++++++.|+++....++....++.+.++++.+...... ..+.....+
T Consensus 308 ~~~~aa~~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 386 (434)
T 2epj_A 308 PITMAAGLATLKALEE-EPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVK 386 (434)
T ss_dssp HHHHHHHHHHHHHHHH-SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHH
Confidence 9999999999998876 458899999999999999873100133211234578888888641000 000124567
Q ss_pred HHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 396 ICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 396 ~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+.+.|+++||++.+... .+ +.++..+|++|+++++++|+++++++.
T Consensus 387 ~~~~l~~~Gv~v~~~~~---------~~--~~~~~~~t~e~i~~~l~~l~~~l~~~~ 432 (434)
T 2epj_A 387 LHEEMLRRGVFIAPSNL---------EA--VFTGLPHQGEALEIAVEGLRSSLKTVL 432 (434)
T ss_dssp HHHHHHHTTEECCSSTT---------SC--EECCTTCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCeEEeccCC---------Cc--EEEeccCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999887542 23 445678999999999999999988764
No 27
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=100.00 E-value=3.6e-43 Score=351.64 Aligned_cols=379 Identities=14% Similarity=0.130 Sum_probs=281.0
Q ss_pred ChhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEE-ECCeeeEEeecCCc---cCCCCChhhHHHHHHHHHhc
Q psy15447 35 HTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVN-INGIPCINFATHNY---LSFVENPDIEKCAIDCIDKN 110 (457)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~-~~G~~~id~~s~~~---l~~~~~p~i~~a~~~~l~~~ 110 (457)
+++++.+..++..|.++..+..... ..|+++++++|+++| .|||+||||+++.+ +|+ +||+|.+|+.+|+.+
T Consensus 56 ~s~~l~~~~~~~~~~g~~~~~~~~~--~~p~~~~~~~G~~l~D~dG~~yiD~~~~~~~~~lGh-~~p~V~~Av~~q~~~- 131 (465)
T 2yky_A 56 VSAGHHERARRSMPGGNTRSILFHR--PFPLVIAQGTGSRFQDVDGHAYVNFLGEYTAGLFGH-SHPVIRAAVERALAV- 131 (465)
Confidence 3555666666666655544332221 248899999999999 69999999998765 454 489999999999987
Q ss_pred CCCCCCCCCcccChHHHHHHHHHHHhhc-CCCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHH---h
Q psy15447 111 GVGSCGPRGFYGTNVVHLDLENDIASFM-GLEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLI---A 183 (457)
Q Consensus 111 ~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~---~ 183 (457)
+... ...++...+|+++|++++ +.+.+++++||++|++.|++.. .++.++|..+..+|+.+...+. .
T Consensus 132 ~~~~------~~~~~~~~~Lae~L~~~~p~~~~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~ 205 (465)
T 2yky_A 132 GLNL------STQTENEALFAEAVCDRFPSIDLVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAP 205 (465)
Confidence 3221 125778899999999998 6788999999999999999875 4556677778889988765551 1
Q ss_pred cCC--eEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcc
Q psy15447 184 SRC--KVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVS 257 (457)
Q Consensus 184 ~g~--~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~ 257 (457)
.|. .+..++++|+++|++++++.. +++++|++||+++++|.+.| +++|+++|++||++||+||+|+
T Consensus 206 ~g~~~~~~~~~~~d~~~l~~~l~~~~--------~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~ 277 (465)
T 2yky_A 206 TNAPYHVVLGVYNDVEGTADLLKRHG--------HDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT 277 (465)
Confidence 233 456778899999999997532 46789999999999998877 9999999999999999999999
Q ss_pred cccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhh--CC-cceecCCCcHHHHHHHHHHH
Q psy15447 258 FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLS--GS-GYCFSASLPPFLAVAANKAL 332 (457)
Q Consensus 258 ~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~aaa~a~l 332 (457)
+++|. .+..+++|+.| |++ ||||++|+ +.|++++++++++.+... .. ....+.+.+|+++++++++|
T Consensus 278 -~r~g~--~~a~~~~gv~p---Di~--t~sK~lg~G~piG~v~~~~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL 349 (465)
T 2yky_A 278 -SRLSG--GGAQEMLGISA---DLT--TLGKYIGGGMSFGAFGGRRDLMERFDPARDGAFAHAGTFNNNILTMSAGHAAL 349 (465)
Confidence 66553 33557778766 665 89999975 348899999999988651 11 12233346999999999999
Q ss_pred HHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc-----h-HHHHHHHHHHHHHHHHcCee
Q psy15447 333 HLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD-----E-VASKKLLQTICDMCIQAGFA 406 (457)
Q Consensus 333 ~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~-~~~~~~~~~~~~~l~~~Gi~ 406 (457)
+.+++. ++.++++++++++++.|+++....++....++.+.++++.+.+... . ..+.....++++.|+++||+
T Consensus 350 ~~l~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~GV~ 428 (465)
T 2yky_A 350 TQIYTR-QAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRKGIY 428 (465)
Confidence 988654 5889999999999999987421122222224567888887754110 0 01112356799999999999
Q ss_pred EeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 407 ITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 407 v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
+.+..+ +. ++..+|++||++++++|+++++++..
T Consensus 429 v~p~~~---------~~----~s~~~t~edid~~l~~l~~~l~~~~~ 462 (465)
T 2yky_A 429 LAPRGM---------YA----LSLEIADAGRDAFAEALADFIGEQRA 462 (465)
Confidence 987653 11 66789999999999999999887654
No 28
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=100.00 E-value=6.4e-39 Score=320.35 Aligned_cols=347 Identities=15% Similarity=0.140 Sum_probs=266.5
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+++|+ ||++||||+++ +++|+ ++|++.+++.++++++...+ +. +..+...+++++|++++
T Consensus 39 ~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~ai~~~~~~~~~~~---~~--~~~~~~~~l~~~la~~~ 112 (420)
T 2pb2_A 39 ADFIPVKGKGSRVWDQQGKEYIDFAGGIAVTALGH-CHPALVEALKSQGETLWHTS---NV--FTNEPALRLGRKLIDAT 112 (420)
T ss_dssp CCSCEEEEEBTEEEETTCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCCCCC---TT--SCCHHHHHHHHHHHHHS
T ss_pred CCceEEeeecCEEEECCCCEEEEccccccccccCC-CCHHHHHHHHHHHHhccccc---Cc--cCCHHHHHHHHHHHhhC
Confidence 478899999999995 99999999886 67787 58999999999998865422 11 25688999999999999
Q ss_pred CCCcEEEecccHHHHHHHHHhhcC-------CC-CEEE-EeCcccHHHHHHHHhcCCe------------EEEecCCCHH
Q psy15447 139 GLEETALYSFGFSTSASAIAAYVK-------RN-DAVF-VDENINFAIQTGLIASRCK------------VQYFKHNNMQ 197 (457)
Q Consensus 139 g~~~~i~~~sG~~a~~~ai~a~~~-------~g-d~v~-~~~~~h~~~~~~~~~~g~~------------~~~~~~~d~~ 197 (457)
|.+.+++++||++|+..+++++.. +| +.|+ .+..+|+.+...+...|.+ +..++++|++
T Consensus 113 g~~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~ 192 (420)
T 2pb2_A 113 FAERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLH 192 (420)
T ss_dssp SCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTTCHH
T ss_pred CCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecCCCHH
Confidence 999999999999999999998764 45 3454 5556777776666666543 6778888999
Q ss_pred HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC-C---ChHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-cccc
Q psy15447 198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI-C---PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYF 272 (457)
Q Consensus 198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i-~---~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~ 272 (457)
+|++.+++ ++++|+++|+++++|.+ . ++++|+++|++||++||+||+|+ | +|++|..+ .+.+
T Consensus 193 ~le~~i~~-----------~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~-g-~~~~g~~~~~~~~ 259 (420)
T 2pb2_A 193 AVKAVMDD-----------HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQC-G-MGRTGDLFAYMHY 259 (420)
T ss_dssp HHHHHCCT-----------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-T-TTTTSSSSHHHHH
T ss_pred HHHHHhcc-----------CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCc-C-cccCCcHHHHHhc
Confidence 99988752 46899999999887763 3 38999999999999999999995 3 45555544 3567
Q ss_pred CCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Q psy15447 273 GVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCN 350 (457)
Q Consensus 273 ~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~ 350 (457)
++.| |++ ||||++|+ +.|++++++++++.+.......+| +.++++++++.++|+.+++ +++.++++++++
T Consensus 260 ~~~~---dii--t~sK~l~~G~~iG~~~~~~~l~~~l~~~~~~~t~--~~~~~~~aa~~a~L~~~~~-~~~~~~~~~~~~ 331 (420)
T 2pb2_A 260 GVTP---DIL--TSAKALGGGFPVSAMLTTQEIASAFHVGSHGSTY--GGNPLACAVAGAAFDIINT-PEVLQGIHTKRQ 331 (420)
T ss_dssp TCCC---SEE--EECGGGGTTSCCEEEEECHHHHTTCC----CCEE--CCCHHHHHHHHHHHHHHSS-HHHHHHHHHHHH
T ss_pred CCCC---CeE--EecccccCCCceEEEEEhHHHHHhhcCCCcCccc--CcCHHHHHHHHHHHHHHHh-ccHHHHHHHHHH
Confidence 7765 676 79999973 358888888887766543233444 4599999999999998865 568899999999
Q ss_pred HHHHHhhccc-ccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEec
Q psy15447 351 TMHSLLSQHK-VTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCN 429 (457)
Q Consensus 351 ~l~~~L~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~ 429 (457)
++.+.|+++. ..+.+... ++.+.++++.+...... ...++.+.|+++||++.+.. ++.+|++|+
T Consensus 332 ~l~~~L~~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~-----~~~~l~~~l~~~Gi~v~~~~---------~~~iRl~~~ 396 (420)
T 2pb2_A 332 QFVQHLQAIDEQFDIFSDI-RGMGLLIGAELKPKYKG-----RARDFLYAGAEAGVMVLNAG---------ADVMRFAPS 396 (420)
T ss_dssp HHHHHHHHHHHHHCCEEEE-EEETTEEEEEECGGGTT-----CHHHHHHHHHHTTEECEESS---------TTEEEECCC
T ss_pred HHHHHHHHHHhcCCCeEEE-EecceEEEEEECCCchH-----HHHHHHHHHHHCCCEEEeCC---------CCEEEEECC
Confidence 9999998731 11233222 34578888877642100 24578999999999988653 478999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHh
Q psy15447 430 ISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 430 ~~~t~edi~~~~~~l~~~~~~~ 451 (457)
..+|++|+++++++|+++++++
T Consensus 397 ~~~t~eei~~~~~~l~~~l~~~ 418 (420)
T 2pb2_A 397 LVVEEADIHEGMQRFAQAVGKV 418 (420)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998765
No 29
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=100.00 E-value=1.2e-38 Score=319.48 Aligned_cols=381 Identities=15% Similarity=0.198 Sum_probs=276.2
Q ss_pred ChhhHHHHHcccCCCCCCCcccccc-ccCCceeeecCCCcEEEE-CCeeeEEeecCC---ccCCCCChhhHHHHHHHHHh
Q psy15447 35 HTINVDALINNWTPEPIVSKAEKFK-DVSSKYVVDQKSGYIVNI-NGIPCINFATHN---YLSFVENPDIEKCAIDCIDK 109 (457)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~~-~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~ 109 (457)
+++++.+..++..|.+.+++..... ....|+++++++|.++|+ ||++||||+++. .+|+ +||++.+|+.+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~-~~p~v~~A~~~~~~~ 84 (429)
T 4e77_A 6 KSENLYAQAQQLIPGGVNSPVRAFTGVGGIPLFIERADGAYLFDVDGKAYIDYVGSWGPMILGH-NHPAIRQAVIEAVER 84 (429)
T ss_dssp HHHHHHHHHHHHSGGGCSSGGGGTTTTCSCCCCEEEEEBTEEEETTCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHhhcCCCcCcccccccccCCCCceEEEeecCEEEECCCCEEEECCCchhccccCC-CCHHHHHHHHHHHHh
Confidence 3567777777777777665433322 223688999999999995 999999998864 3454 489999999999987
Q ss_pred cCCCCCCCCCcccChHHHHHHHHHHHhhc-CCCcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhc-
Q psy15447 110 NGVGSCGPRGFYGTNVVHLDLENDIASFM-GLEETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIAS- 184 (457)
Q Consensus 110 ~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~- 184 (457)
... . ....+...+|+++|++++ +.+++++++||++|++.+++. +.+++++|+.+..+|+.+...+...
T Consensus 85 ~~~-~------~~~~~~~~~la~~l~~~~~~~~~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 157 (429)
T 4e77_A 85 GLS-F------GAPTEMEVKMAQLVTDLVPTMDMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAG 157 (429)
T ss_dssp CSC-C------SSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC----------
T ss_pred Ccc-c------CCCCHHHHHHHHHHHhhCCCCCEEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcC
Confidence 321 1 125688899999999988 467889999999999999984 3466677777888888766322111
Q ss_pred ------------------CCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHH
Q psy15447 185 ------------------RCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSL 242 (457)
Q Consensus 185 ------------------g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l 242 (457)
...+..++++|+++|++++++.. +++++|++||+++++|.+.| +++|+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~--------~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l 229 (429)
T 4e77_A 158 SGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYP--------QEVACIIVEPVAGNMNCIPPLPEFLPGLRAL 229 (429)
T ss_dssp --------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHST--------TTEEEEEECSSBCTTSCBCCCTTHHHHHHHH
T ss_pred CcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcC--------CCEEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 12456778889999999998642 46789999999999999988 9999999
Q ss_pred HHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcce-ecCC
Q psy15447 243 RSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYC-FSAS 319 (457)
Q Consensus 243 ~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~-~~~~ 319 (457)
|++||++||+||+|+..+.|. .+..+++++.| |++ |+||++|+ +.|++++++++++.+......+. .+.+
T Consensus 230 ~~~~~~lli~DEv~~g~r~g~--~~~~~~~~~~p---di~--t~sK~~~~G~~~G~~~~~~~~~~~l~~~~~~~~~~t~~ 302 (429)
T 4e77_A 230 CDEFGALLIIDEVMTGFRVAL--AGAQDYYHVIP---DLT--CLGKIIGGGMPVGAFGGRREVMNALAPTGPVYQAGTLS 302 (429)
T ss_dssp HHHHTCEEEEEETTTBTTTBT--TCHHHHTTCCC---SEE--EEEGGGGTTSCCEEEEECHHHHTTBTTTSSBCC--CCC
T ss_pred HHHcCCEEEEeccccCcccCc--chHHHhcCCCC---Cee--eecccccCCCCeEEEEECHHHHHHhccCCCccccCCCC
Confidence 999999999999997323332 33457788876 665 89999964 56899999999887764322122 2335
Q ss_pred CcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc-h------HHHHHH
Q psy15447 320 LPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD-E------VASKKL 392 (457)
Q Consensus 320 ~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~------~~~~~~ 392 (457)
.+|++++++.++++.+++ +++.++++++.+++++.|+++....++....++.+.++++.+..... . ..+...
T Consensus 303 ~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (429)
T 4e77_A 303 GNPIAMAAGFACLTEISQ-VGVYETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVER 381 (429)
T ss_dssp CCHHHHHHHHHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHH
T ss_pred CCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEEEccCcccccccccccccHHH
Confidence 799999999999998854 46889999999999998876321123222223457888888765410 0 001124
Q ss_pred HHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 393 LQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 393 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
..++++.|+++||++.+... +.+| ++..+|++|+++++++|++++++
T Consensus 382 ~~~~~~~l~~~Gi~v~~~~~---------~~~~--~~~~~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 382 FKRFFHLMLEEGVYLAPSAF---------EAGF--MSLAHSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp HHHHHHHHHHTTEECCSSTT---------SCEE--CCTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCeEEeecCC---------CCEE--EeccCCHHHHHHHHHHHHHHHHh
Confidence 56899999999999887542 3444 56789999999999999998753
No 30
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=100.00 E-value=9.2e-39 Score=320.20 Aligned_cols=380 Identities=15% Similarity=0.139 Sum_probs=280.5
Q ss_pred hhhHHHHHcccCCCCCCCcccccc-ccCCceeeecCCCcEEEE-CCeeeEEeecCC---ccCCCCChhhHHHHHHHHHhc
Q psy15447 36 TINVDALINNWTPEPIVSKAEKFK-DVSSKYVVDQKSGYIVNI-NGIPCINFATHN---YLSFVENPDIEKCAIDCIDKN 110 (457)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~~-~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~~ 110 (457)
++++.+...+..|.+..++..... ....|+++++++|.++|+ ||++||||+++. ++|+ +||++.+|+.+++.+.
T Consensus 7 s~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~-~~p~v~~A~~~~~~~~ 85 (429)
T 3k28_A 7 SIAAFEEAQDLMPGGVNSPVRAFKSVGMNPLFMERGKGSKVYDIDGNEYIDYVLSWGPLIHGH-ANDRVVEALKAVAERG 85 (429)
T ss_dssp HHHHHHHHTTTSGGGSSSGGGGCGGGTCCCCCEEEEEBTEEEETTCCEEEESCGGGTTCTTCB-SCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhcCCCcCcccccccccCCCCceEEEeecCEEEECCCCEEEECCCChhhcccCC-CCHHHHHHHHHHHhhC
Confidence 567788888888888765544332 234688999999999995 999999999864 4555 4899999999999884
Q ss_pred CCCCCCCCCcccChHHHHHHHHHHHhhc-CCCcEEEecccHHHHHHHHHhhc---CCCCEEEEeCcccHHHHHHHHhcC-
Q psy15447 111 GVGSCGPRGFYGTNVVHLDLENDIASFM-GLEETALYSFGFSTSASAIAAYV---KRNDAVFVDENINFAIQTGLIASR- 185 (457)
Q Consensus 111 ~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~~~i~~~sG~~a~~~ai~a~~---~~gd~v~~~~~~h~~~~~~~~~~g- 185 (457)
.. ++...+...+|+++|++++ +.+++++++||++|+..+++++. ++..+|+.+..+|+.+...+...+
T Consensus 86 ~~-------~~~~~~~~~~l~~~la~~~~~~~~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~ 158 (429)
T 3k28_A 86 TS-------FGAPTEIENKLAKLVIERVPSIEIVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGS 158 (429)
T ss_dssp SC-------CSSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCT
T ss_pred cC-------cCCCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCC
Confidence 32 1235688899999999998 57788999999999999998765 344455667777866544332222
Q ss_pred ------------------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHH
Q psy15447 186 ------------------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLR 243 (457)
Q Consensus 186 ------------------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~ 243 (457)
..+..++++|++++++.+++.. +++++|++||+++++|.+.| +++|+++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~--------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~ 230 (429)
T 3k28_A 159 GVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFG--------DDIACVIVEPVAGNMGVVPPQPGFLEGLREVT 230 (429)
T ss_dssp TC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHG--------GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHH
T ss_pred cccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCC--------CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHH
Confidence 1456778889999999997643 46789999999999999988 99999999
Q ss_pred HHcCcEEEEEcCcccccccCCCCc-cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCc-ceecCC
Q psy15447 244 SKYQARIFVDESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSG-YCFSAS 319 (457)
Q Consensus 244 ~~~g~~li~DEa~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~-~~~~~~ 319 (457)
++||++||+||+|+.. +.|.. ..+++++.| |++ |+||++|+ +.|++++++++++.+...... ...+.+
T Consensus 231 ~~~~~~li~DEv~~g~---~~g~~~~~~~~~~~~---di~--t~sK~~~~G~~iG~~~~~~~~~~~~~~~~~~~~~~t~~ 302 (429)
T 3k28_A 231 EQNGALLIFDEVMTGF---RVAYNCGQGYYGVTP---DLT--CLGKVIGGGLPVGAYGGKAEIMRQVAPSGPIYQAGTLS 302 (429)
T ss_dssp HHHTCEEEEECTTTTT---TSSTTHHHHHHTCCC---SEE--EECGGGGTTSCCEEEEECHHHHTTBTTTSSBCCCCTTT
T ss_pred HHcCCEEEEecccccc---ccCcchHHHHhCCCC---cee--hhhhhhcCCCCeEEEEEcHHHHhhhccCCCccccCCCC
Confidence 9999999999999532 33433 456778766 565 79999964 468999999998877542211 122345
Q ss_pred CcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch------HHHHHHH
Q psy15447 320 LPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE------VASKKLL 393 (457)
Q Consensus 320 ~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~ 393 (457)
.+++++++++++++.++ +++.++++++.+++++.|+++....+.....++.+.++++.+..+... ..+....
T Consensus 303 ~~~~a~aaa~aal~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (429)
T 3k28_A 303 GNPLAMAAGYETLVQLT--PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRAGSMIGIFFTDEPVINYDAAKSSNLQFF 380 (429)
T ss_dssp TCHHHHHHHHHHHHTCC--HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHH
T ss_pred CChHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEeeccEEEEEEecCCcccccccccccHHHH
Confidence 69999999999998765 568899999999999998773111121111134577777776532100 0112245
Q ss_pred HHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 394 QTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 394 ~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
.++++.|+++||++++.. .+.+|+ +..+|++|+++++++|+++++++.
T Consensus 381 ~~~~~~l~~~Gv~v~~~~---------~~~~r~--~~~~t~e~i~~~l~~l~~~l~~~~ 428 (429)
T 3k28_A 381 AAYYREMVEQGVFLPPSQ---------FEGLFL--STVHSDADIEATIAAAEIAMSKLK 428 (429)
T ss_dssp HHHHHHHHHTTEECCSST---------TSCBCC--CTTCCHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHCCeEEecCC---------CCCEEE--ECCCCHHHHHHHHHHHHHHHHHHh
Confidence 678999999999988653 356777 467899999999999999987653
No 31
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=100.00 E-value=1.5e-40 Score=354.05 Aligned_cols=374 Identities=11% Similarity=0.022 Sum_probs=264.3
Q ss_pred CCCCcccccc--ccCCceeeecCCCc--EEEE-CCe----eeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCC
Q psy15447 50 PIVSKAEKFK--DVSSKYVVDQKSGY--IVNI-NGI----PCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGP 117 (457)
Q Consensus 50 ~~~~~~~~~~--~~~~~~~i~~~~g~--~~~~-~G~----~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~ 117 (457)
.+|+|.++.. ....|++|++++|. |||+ ||+ +|||++|+ +.+|++.||+|.+|+.+|++++++..
T Consensus 341 ~~whp~t~~~~~~~~~p~~i~~a~G~g~~l~D~dG~~~~~~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h~~--- 417 (831)
T 4a0g_A 341 VFWWPFTQHKLVHQETVTVIDSRCGENFSIYKASDNSSLSQQFDACASWWTQGPDPTFQAELAREMGYTAARFGHVM--- 417 (831)
T ss_dssp HBCCTTCCGGGCCGGGCEEEEEEETTEEEEEEHHHHSEEEEEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSSCC---
T ss_pred hccCCccCcccccCCCCeEEEEeeccceEEEECCCCccchheeeecccHhhcCCCCCCCHHHHHHHHHHHhhccccc---
Confidence 4444444432 22357889999885 7885 898 99999874 44555338999999999999987542
Q ss_pred CCcccChHHHHHHHHHHHhhcC---CCcEEEecccHHHHHHHHHhhc------------------CCCCEEEEeCcccHH
Q psy15447 118 RGFYGTNVVHLDLENDIASFMG---LEETALYSFGFSTSASAIAAYV------------------KRNDAVFVDENINFA 176 (457)
Q Consensus 118 ~~~~g~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~ai~a~~------------------~~gd~v~~~~~~h~~ 176 (457)
+...++++..+|+++|+++++ .++++|++||++||+.||+... ++.++|..+..||+.
T Consensus 418 -~~~~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~ 496 (831)
T 4a0g_A 418 -FPENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGD 496 (831)
T ss_dssp -CTTEECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCS
T ss_pred -ccccCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccC
Confidence 112368999999999999987 5689999999999999998752 234578889999999
Q ss_pred HHHHHHhcCCeE------------------------------EEec------------CCCH------------------
Q psy15447 177 IQTGLIASRCKV------------------------------QYFK------------HNNM------------------ 196 (457)
Q Consensus 177 ~~~~~~~~g~~~------------------------------~~~~------------~~d~------------------ 196 (457)
+..++.+++... ..+| +++.
T Consensus 497 T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (831)
T 4a0g_A 497 TLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYS 576 (831)
T ss_dssp SHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHH
T ss_pred ceeeeeccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHH
Confidence 999998876310 0111 1232
Q ss_pred HHHHHHHHhhchhcccCCCCccEEEEEecC-CCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcc-cccccCCCCcccc
Q psy15447 197 QHLEELLRQQDERDTLNSKVTKKFIIVEGV-YMNSADICP----LKDILSLRSKYQARIFVDESVS-FGTLGSTGHGVTE 270 (457)
Q Consensus 197 ~~le~~l~~~~~~~~~~~~~~~~~vi~e~v-~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~-~g~~g~~g~~~~~ 270 (457)
++|++.|++.. ....++++++|++||+ ++.+|.+.| +++|+++|++||++||+||+++ +|++|+ .+.++
T Consensus 577 ~~le~~l~~~~---~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~--~fa~e 651 (831)
T 4a0g_A 577 AYLSKHLQEHS---GVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGV--ETTTE 651 (831)
T ss_dssp HHHHHHC------------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSB--SSTHH
T ss_pred HHHHHHHHhhh---hhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCC--chhhH
Confidence 34555554210 0011267899999997 888888765 8999999999999999999875 655554 23468
Q ss_pred ccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhC----CcceecCCCcHHHHHHHHHHHHHHhhCcHHHH
Q psy15447 271 YFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSG----SGYCFSASLPPFLAVAANKALHLLKANPSLLT 343 (457)
Q Consensus 271 ~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~ 343 (457)
++|+.| ||+ |++|++|+ +.|++++++++++.+.... ..+.++.+.+|++|++++++|+++++++ +.+
T Consensus 652 ~~gv~P---Dii--tlsK~L~gG~~Plgav~~~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~-l~~ 725 (831)
T 4a0g_A 652 LLGCKP---DIA--CFAKLLTGGMVPLAVTLATDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPE-TNH 725 (831)
T ss_dssp HHSSCC---SEE--EECGGGGTTSSCCEEEEECHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTT-TCT
T ss_pred hcCCCC---cEE--EEecccccCccCcEEEEECHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhH-HHH
Confidence 899988 676 89999964 3388999999998875432 1133455569999999999999987543 445
Q ss_pred HHHHHHHH--------HHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCc
Q psy15447 344 KLREKCNT--------MHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLD 414 (457)
Q Consensus 344 ~l~~~~~~--------l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~ 414 (457)
+++++.++ +.+.+++ .+.+..+ ...+.++.+.+..+... ......+.++.+.|+++||++++.
T Consensus 726 ~~~~~~~~l~~~l~~~l~~~l~~---~~~v~~v-rg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~p~---- 797 (831)
T 4a0g_A 726 NITSQGKTLRELWDEELVQQISS---HSAVQRV-VVIGTLFALELKADASNSGYASLYAKSLLIMLREDGIFTRPL---- 797 (831)
T ss_dssp TBCTTSSBBCCCSCHHHHHHHHH---STTEEEE-EEETTEEEEEEC---------CHHHHHHHHHHHHTTEECCCB----
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh---CCCceeE-eecccEEEEEEecCccccccchHHHHHHHHHHHHCCcEEEec----
Confidence 55444333 3334444 3444333 35688888887643211 111124667999999999998764
Q ss_pred cccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 415 QEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 415 ~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
.+.+||++++.+|++||++++++|+++++++.
T Consensus 798 ------g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l~ 829 (831)
T 4a0g_A 798 ------GNVIYLMCGPCTSPEICRRLLTKLYKRLGEFN 829 (831)
T ss_dssp ------TTEEEEECCTTCCHHHHHHHHHHHHHHHTTTC
T ss_pred ------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 37999999999999999999999999987654
No 32
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=100.00 E-value=6.9e-38 Score=315.70 Aligned_cols=356 Identities=14% Similarity=0.136 Sum_probs=265.2
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++++++|+++|+ +|++|+||+++ +++|+. +|++.+|+.+++++++ . ++...+..+...+++++|++++
T Consensus 32 ~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~-~~~v~~a~~~~~~~~~-~---~~~~~~~~~~~~~l~~~la~~~ 106 (449)
T 3a8u_X 32 DPRLIVAAEGSWLVDDKGRKVYDSLSGLWTCGAGHT-RKEIQEAVAKQLSTLD-Y---SPGFQYGHPLSFQLAEKITDLT 106 (449)
T ss_dssp SCCCEEEEEBTEEEETTCCEEEETTHHHHTCTTCBS-CHHHHHHHHHHTTTCS-C---CCSSSCCCHHHHHHHHHHHTTS
T ss_pred CCceEEeeecCEEEECCCCEEEECCccHhhccCCCC-CHHHHHHHHHHHHhCC-C---ccccccCCHHHHHHHHHHHHhC
Confidence 578899999999995 99999999765 456766 8999999999998754 1 1221346788899999999999
Q ss_pred C--CCcEEEecccHHHHHHHHHhhcC--------CCCEEEE-eCcccHHHHHHHHhcCC--------------eEEEecC
Q psy15447 139 G--LEETALYSFGFSTSASAIAAYVK--------RNDAVFV-DENINFAIQTGLIASRC--------------KVQYFKH 193 (457)
Q Consensus 139 g--~~~~i~~~sG~~a~~~ai~a~~~--------~gd~v~~-~~~~h~~~~~~~~~~g~--------------~~~~~~~ 193 (457)
+ .+.+++++||++|+..+++++.. ++|.|++ +..+|+.+..++...+. ....++.
T Consensus 107 ~~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~ 186 (449)
T 3a8u_X 107 PGNLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTL 186 (449)
T ss_dssp STTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCC
T ss_pred CCCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCc
Confidence 5 55788899999999999988753 5666655 66677776666666542 2222221
Q ss_pred --------CC--------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447 194 --------NN--------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVD 253 (457)
Q Consensus 194 --------~d--------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~D 253 (457)
.| +++|++.+++.. ++++++|+++|+++++|.+.| +++|+++|++||++||+|
T Consensus 187 ~~~~~~~~~d~~~~~~~~~~~le~~l~~~~-------~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~D 259 (449)
T 3a8u_X 187 LASNAYSRGMPKEGGIALADELLKLIELHD-------ASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFD 259 (449)
T ss_dssp CGGGTTCSSSCSSSHHHHHHHHHHHHHHHC-------GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEE
T ss_pred cccCccccCChHHHHHHHHHHHHHHHHhcC-------CCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEe
Confidence 15 888999887532 135689999999988998888 999999999999999999
Q ss_pred cCc-ccccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCC-------cceecCCCcH
Q psy15447 254 ESV-SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGS-------GYCFSASLPP 322 (457)
Q Consensus 254 Ea~-~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~-------~~~~~~~~~~ 322 (457)
|+| ++|+.|. .+..+++++.| |++ |+||++++ +.|++++++++++.+..... .+.++.+.++
T Consensus 260 ev~~~~g~~g~--~~~~~~~~~~~---di~--s~sK~l~~G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~ 332 (449)
T 3a8u_X 260 EVITGFGRTGS--MFGADSFGVTP---DLM--CIAKQVTNGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHP 332 (449)
T ss_dssp CTTTTTTTTSS--SSHHHHHTCCC---SEE--EECGGGGTTSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCCCTTTTCH
T ss_pred ccccCccccCc--chhhhhcCCCC---CEE--EEcccccCCCCceEEEEECHHHHHHhhccCcccccccccccCCCcccH
Confidence 999 4655443 22346677765 665 89999975 36888889999888865321 1223445699
Q ss_pred HHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH
Q psy15447 323 FLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ 402 (457)
Q Consensus 323 ~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~ 402 (457)
++++++.++++.+++. ++.++++++.+++++.|+++...+.+... ++.+.++++.+....... .....++.+.|++
T Consensus 333 ~~~aa~~aal~~~~~~-~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-~~~g~~~~i~~~~~~~~~--~~~~~~~~~~l~~ 408 (449)
T 3a8u_X 333 VACAAGLAALCLLQKE-NLVQSVAEVAPHFEKALHGIKGAKNVIDI-RNFGLAGAIQIAPRDGDA--IVRPFEAGMALWK 408 (449)
T ss_dssp HHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHTTTTSTTEEEE-EEETTEEEEEECCBTTBS--SHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCCCeEEE-eeeEEEEEEEEecCcccc--cccHHHHHHHHHH
Confidence 9999999999988764 58899999999999999873222333222 345788888886432100 0012358889999
Q ss_pred cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 403 AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 403 ~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+||++++.. +++||+++..+|++|+++++++|+++++++
T Consensus 409 ~Gv~v~~~g----------~~iRis~~~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 409 AGFYVRFGG----------DTLQFGPTFNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp HTEECEEET----------TEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCcEEecCC----------CEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 999988642 689999999999999999999999998765
No 33
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=100.00 E-value=7.1e-39 Score=324.19 Aligned_cols=355 Identities=13% Similarity=0.146 Sum_probs=253.6
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecCCc---cCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATHNY---LSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~~~---l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|..+++++|.++| .||++||||+++.+ +|+ +||+|.+|+.+++.+.+..+..........++.++++++|+++.
T Consensus 45 ~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~l~~~~ 123 (472)
T 1ohv_A 45 FFCNYEESRGNYLVDVDGNRMLDLYSQISSIPIGY-SHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVA 123 (472)
T ss_dssp CCBCGGGCBBTEEEBTTSCEEEESSHHHHTCSSCB-TCHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGC
T ss_pred CCceEEEEEcCEEEeCCCCEEEECCCCHhhcccCC-CCHHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHhC
Confidence 35678999999999 59999999988644 455 48999999999986532211110000124566777777777776
Q ss_pred --CCCcEEEecccHHHHHHHHHhhc---------------------------C--CCCEEEEeCcccHHHHHHHHhcCCe
Q psy15447 139 --GLEETALYSFGFSTSASAIAAYV---------------------------K--RNDAVFVDENINFAIQTGLIASRCK 187 (457)
Q Consensus 139 --g~~~~i~~~sG~~a~~~ai~a~~---------------------------~--~gd~v~~~~~~h~~~~~~~~~~g~~ 187 (457)
+.++++|++||++|++.|++++. + +.++|..+..+|+.+..++.+++..
T Consensus 124 ~~~~~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~ 203 (472)
T 1ohv_A 124 PKGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSK 203 (472)
T ss_dssp CTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSC
T ss_pred CCCcCEEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCc
Confidence 56789999999999999998763 1 2356667778899888887776532
Q ss_pred E-------------EEec-----------CC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC--
Q psy15447 188 V-------------QYFK-----------HN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP-- 235 (457)
Q Consensus 188 ~-------------~~~~-----------~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~-- 235 (457)
. ..++ ++ |+++|++.+++.... ..++++|++|++++++|.+.|
T Consensus 204 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~-----~~~~~~vive~v~~~~G~~~~~~ 278 (472)
T 1ohv_A 204 AIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKK-----KKTVAGIIVEPIQSEGGDNHASD 278 (472)
T ss_dssp HHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEECSSBCTTTCBCCCH
T ss_pred cccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCC-----CCCEEEEEEcCCcCCCCCCCCCH
Confidence 1 1221 12 577888888653210 026789999999999998877
Q ss_pred --hHHHHHHHHHcCcEEEEEcCcccccccCCCCc-cccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCC
Q psy15447 236 --LKDILSLRSKYQARIFVDESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGS 312 (457)
Q Consensus 236 --l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~ 312 (457)
+++|+++|++||++||+||+|+. +|++|.+ ..+++|+. ..+|++ ||||++ ..||+++ ++++. .+....
T Consensus 279 ~~l~~l~~l~~~~g~lli~DEv~~g--~g~~g~~~~~~~~gv~-~~~Di~--t~sK~~-l~GG~~~-~~~~~-~~~~~~- 349 (472)
T 1ohv_A 279 DFFRKLRDISRKHGCAFLVDEVQTG--GGSTGKFWAHEHWGLD-DPADVM--TFSKKM-MTGGFFH-KEEFR-PNAPYR- 349 (472)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTTT--TTTTSSSSGGGGGCCS-SCCSEE--EECGGG-SSEEEEE-CGGGS-CSSSSS-
T ss_pred HHHHHHHHHHHHhCCEEEEeCcccC--CCCCCCchhccccCCC-CCCCEE--EEcccc-ccCCccC-chhhc-cccccc-
Confidence 99999999999999999999972 4455543 45677764 123776 899994 2268877 65542 111111
Q ss_pred cceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccc-ccCC-eEEeccCCCCeEEEEecCCcchHHHH
Q psy15447 313 GYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHK-VTQR-FLVQGHRDTPLKYLYLQKSDDEVASK 390 (457)
Q Consensus 313 ~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~-~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~ 390 (457)
...+.+.+|+++++++++|+.+.+. ++.++++++++++++.|+++. ..++ +... .+.+.++++.+....
T Consensus 350 -~~~T~~~~~~~~aaa~aal~~~~~~-~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~-~~~g~~~~~~~~~~~------ 420 (472)
T 1ohv_A 350 -IFNTWLGDPSKNLLLAEVINIIKRE-DLLSNAAHAGKVLLTGLLDLQARYPQFISRV-RGRGTFCSFDTPDES------ 420 (472)
T ss_dssp -SCCSSSSCHHHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHHHHCTTTCEEE-EEETTEEEEECSSHH------
T ss_pred -ccCccCccHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHhhCCCcEEee-cCCceEEEEEeCChh------
Confidence 1122246999999999999988764 478999999999999998732 1222 3222 234778887665422
Q ss_pred HHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 391 KLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 391 ~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
...+++++|+++||++.+.. .+++||+++..+|++||++++++|+++++++
T Consensus 421 -~~~~~~~~l~~~Gv~~~~~g---------~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 421 -IRNKLISIARNKGVMLGGCG---------DKSIRFRPTLVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp -HHHHHHHHHHHTTEECEEET---------TTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred -HHHHHHHHHHHCCeEEecCC---------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 45689999999999987642 4799999999999999999999999988754
No 34
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=100.00 E-value=3.1e-38 Score=315.85 Aligned_cols=377 Identities=18% Similarity=0.206 Sum_probs=275.3
Q ss_pred hhhHHHHHcccCCCCCCCccccccc-cCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhc
Q psy15447 36 TINVDALINNWTPEPIVSKAEKFKD-VSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKN 110 (457)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~ 110 (457)
++++.+..++..|.+..++...... ...|+++++++|+++|+ ||++||||+++ +++|+ +||++.+|+.+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~d~~g~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~- 83 (424)
T 2e7u_A 6 SEAYFQEAKRHIPGGVSSPVRAFKAVGGTPPFLVRGEGAYVWDADGNRYLDYVMSWGPLILGH-AHPKVLARVRETLER- 83 (424)
T ss_dssp HHHHHHHHHHHSGGGSSSGGGGCTTTCSCCCCEEEEEBTEEEETTCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHhcCCCcCCcceeccccCCCCeeEEeeecCEEEeCCCCEEEEccccccccccCC-CCHHHHHHHHHHHHh-
Confidence 4566677777777665543333221 23588899999999995 99999999986 46777 689999999999987
Q ss_pred CCCCCCCCCcccChHHHHHHHHHHHhhc-CCCcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHh---
Q psy15447 111 GVGSCGPRGFYGTNVVHLDLENDIASFM-GLEETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIA--- 183 (457)
Q Consensus 111 ~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~--- 183 (457)
+..+ .+..+...+++++|++++ +.+.+++++||++|+..++++ +.+++++|+.+..+|+.....+..
T Consensus 84 ~~~~------~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 157 (424)
T 2e7u_A 84 GLTF------GAPSPLEVALAKKVKRAYPFVDLVRFVNSGTEATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGS 157 (424)
T ss_dssp CSCC------SSCCHHHHHHHHHHHHHCTTCCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCS
T ss_pred CCCC------CCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCC
Confidence 3221 135778899999999999 677889999999999999986 777777777777777644332211
Q ss_pred ----------cC------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHH
Q psy15447 184 ----------SR------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLR 243 (457)
Q Consensus 184 ----------~g------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~ 243 (457)
.| ..+..++++|++++++.+++.. +++++|++||+++++|.+.| +++|+++
T Consensus 158 ~~~~~~~p~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~--------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l- 228 (424)
T 2e7u_A 158 GALTLGVPSSAGVPEEYAKLTLVLEYNDPEGLREVLKRRG--------EEIAAIIFEPVVGNAGVLVPTEDFLKALHEA- 228 (424)
T ss_dssp SSCCBCEESSTTCCHHHHTTEEEECTTCHHHHHHHHHHHG--------GGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-
T ss_pred cccccCCCCCCCCCCccCCceEeCCCCCHHHHHHHHHhCC--------CCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-
Confidence 12 2467788899999999997532 35689999999988998887 9999999
Q ss_pred HHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcce-ecCCC
Q psy15447 244 SKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYC-FSASL 320 (457)
Q Consensus 244 ~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~-~~~~~ 320 (457)
++||++||+||+|+..+.|. .+..+++++.| |++ |+||++|+ ++|++++++++++.+......+. .+.+.
T Consensus 229 ~~~g~~lI~DEv~~g~~~g~--~~~~~~~~~~~---di~--s~sK~l~~G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~ 301 (424)
T 2e7u_A 229 KAYGVLLIADEVMTGFRLAF--GGATELLGLKP---DLV--TLGKILGGGLPAAAYAGRREIMEKVAPLGPVYQAGTLSG 301 (424)
T ss_dssp GGGTCEEEEECTTTTTTSST--THHHHHHTCCC---SEE--EECGGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTTCS
T ss_pred HHcCCEEEEecCccccccch--hHHHHHhCCCc---chh--hhhhhhhCCcceEEEEEcHHHHhhhcccCCcccCCCCCC
Confidence 99999999999998323332 23446778766 665 89999975 66999999998887754221122 23356
Q ss_pred cHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCc--ch----HHHHHHHH
Q psy15447 321 PPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD--DE----VASKKLLQ 394 (457)
Q Consensus 321 ~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~----~~~~~~~~ 394 (457)
+|++++++.++++.+++.+++.++++++++++++.|+++....++....++.+.++++.+.... .. ..+.....
T Consensus 302 ~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 381 (424)
T 2e7u_A 302 NPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFK 381 (424)
T ss_dssp CHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHH
Confidence 9999999999999887645688999999999999998731101332111345778888876410 00 00012456
Q ss_pred HHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 395 TICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 395 ~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
++++.|+++||++.+... ..+ .++..+|++|+++++++|+++
T Consensus 382 ~~~~~l~~~Gv~v~~~~~---------~~~--~~~~~~t~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 382 RFFHGLLDRGIYWPPSNF---------EAA--FLSVAHREEDVEKTLEALRKA 423 (424)
T ss_dssp HHHHHHHTTTEECCSSSS---------SCE--ECCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCeEEeccCC---------Cce--EeeccCCHHHHHHHHHHHHHh
Confidence 789999999999887542 234 456789999999999999875
No 35
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=100.00 E-value=6.2e-38 Score=314.02 Aligned_cols=380 Identities=16% Similarity=0.163 Sum_probs=277.6
Q ss_pred hhhHHHHHcccCCCCCCCcccccc-ccCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhc
Q psy15447 36 TINVDALINNWTPEPIVSKAEKFK-DVSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKN 110 (457)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~ 110 (457)
++++.+...+..|.+...+..... ....|+++++++|.++|+ ||++||||+++ +.+|+ +||++.+|+.+++++.
T Consensus 6 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~ 84 (427)
T 3fq8_A 6 SDEIFAAAQKLMPGGVSSPVRAFKSVGGQPIVFDRVKDAYAWDVDGNRYIDYVGTWGPAICGH-AHPEVIEALKVAMEKG 84 (427)
T ss_dssp HHHHHHHHTTTSGGGSSSGGGGCTTTTSCCCCEEEEEBTEEEETTSCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhhcCCCcccccccccccCCCCceEEEeeeCEEEECCCCEEEECCCchhhhccCC-CCHHHHHHHHHHHHhC
Confidence 456777777777776654333221 123688999999999995 99999999887 34555 4899999999999874
Q ss_pred CCCCCCCCCcccChHHHHHHHHHHHhhcC-CCcEEEecccHHHHHHHHH---hhcCCCCEEEEeCcccHHHHHHHHhcC-
Q psy15447 111 GVGSCGPRGFYGTNVVHLDLENDIASFMG-LEETALYSFGFSTSASAIA---AYVKRNDAVFVDENINFAIQTGLIASR- 185 (457)
Q Consensus 111 ~~~~~~~~~~~g~~~~~~~l~~~la~~~g-~~~~i~~~sG~~a~~~ai~---a~~~~gd~v~~~~~~h~~~~~~~~~~g- 185 (457)
.. + ....+...+|+++|+++++ .+++++++||++|+..+++ .+.+++++|+.+..+|+.+.......+
T Consensus 85 ~~-~------~~~~~~~~~la~~l~~~~~~~~~v~~~~ggsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 157 (427)
T 3fq8_A 85 TS-F------GAPCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGS 157 (427)
T ss_dssp SC-C------SSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCT
T ss_pred CC-c------CCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCC
Confidence 22 1 1157888999999999884 6788999999999999995 445666777778888865432211111
Q ss_pred ------------------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHH
Q psy15447 186 ------------------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLR 243 (457)
Q Consensus 186 ------------------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~ 243 (457)
..+..++++|++++++++++.. +++++|+++|+++++|.+.| +++|+++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~--------~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~ 229 (427)
T 3fq8_A 158 GVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENP--------GEIAGVILEPIVGNSGFIVPDAGFLEGLREIT 229 (427)
T ss_dssp HHHHHTCCSCSSSCHHHHTTEEEEETTCHHHHHHHHHHST--------TTEEEEEECSSBCTTSCBCCCTTHHHHHHHHH
T ss_pred cccccCCCCCCCCCCcccCceeecCCCCHHHHHHHHHhCC--------CCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHH
Confidence 2367788899999999997642 46789999999999999998 99999999
Q ss_pred HHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCc-ceecCCC
Q psy15447 244 SKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSG-YCFSASL 320 (457)
Q Consensus 244 ~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~-~~~~~~~ 320 (457)
++||++||+||+|+..+.|. .+..+++++.| |++ |+||++|+ +.|++++++++++.+...... +..+.+.
T Consensus 230 ~~~~~~li~DEv~~g~~~g~--~~~~~~~~~~~---di~--t~sK~~~~G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~ 302 (427)
T 3fq8_A 230 LEHDALLVFDEVITGFRIAY--GGVQEKFGVTP---DLT--TLGKIIGGGLPVGAYGGKREIMQLVAPAGPMYQAGTLSG 302 (427)
T ss_dssp HHTTCEEEEECTTTBTTTBT--THHHHHTTCCC---SEE--EECGGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTTTT
T ss_pred HHcCCEEEEeccccccccCc--chhhHhcCCCC---Chh--hhhhhhhCCcceEEEEEcHHHHHhhccCCCccccCCCCc
Confidence 99999999999997222221 23456778766 554 89999964 468999999998877543211 1222345
Q ss_pred cHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch------HHHHHHHH
Q psy15447 321 PPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE------VASKKLLQ 394 (457)
Q Consensus 321 ~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~ 394 (457)
+|++++++.++++.+++ +++.++++++.+++++.|+++....++....+..+.++++.+...... ..+.....
T Consensus 303 ~~~~~aa~~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (427)
T 3fq8_A 303 NPLAMTAGIKTLELLRQ-PGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFS 381 (427)
T ss_dssp CHHHHHHHHHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHH
T ss_pred CHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEEEEEEecCccccccccccccHHHHH
Confidence 99999999999998865 458899999999999988763211122212234577888877542100 01112356
Q ss_pred HHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 395 TICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 395 ~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
++++.|+++||++.+... .|+.++..+|++|+++++++|++++++
T Consensus 382 ~l~~~l~~~Gi~v~~~~~-----------~r~~~~~~~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 382 RFHRGMLEQGIYLAPSQF-----------EAGFTSLAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp HHHHHHHHTTEECCSSTT-----------SCEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCcEEecCCC-----------CCEEeeCcCCHHHHHHHHHHHHHHHHh
Confidence 789999999999887542 266678889999999999999998865
No 36
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=9.9e-38 Score=308.93 Aligned_cols=339 Identities=17% Similarity=0.150 Sum_probs=264.0
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecCC---ccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATHN---YLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|.++++++|.++| .||++|+||+++. .+|+ .+|++.+++.+++++++.++. .+..+...++++++++++
T Consensus 18 ~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~la~~~ 91 (392)
T 3ruy_A 18 LPIVISKAEGVWVEDPEGNRYMDLLSAYSAVNQGH-RHPKIINALIDQANRVTLTSR-----AFHSDQLGPWYEKVAKLT 91 (392)
T ss_dssp CSCEECEEEBTEEECTTCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCSCCCT-----TSEETTHHHHHHHHHHHH
T ss_pred CCceEEeeeeCEEEeCCCCEEEEcCCChhhhccCC-CCHHHHHHHHHHHHhcccccc-----ccCCHHHHHHHHHHHHhc
Confidence 57889999999999 5999999998752 2344 489999999999988654321 135678899999999999
Q ss_pred CCCcEEEecccHHHHHHHHHhhcCC----------CCEEEEeCccc-HHHHHHHHhcCC------------eEEEecCCC
Q psy15447 139 GLEETALYSFGFSTSASAIAAYVKR----------NDAVFVDENIN-FAIQTGLIASRC------------KVQYFKHNN 195 (457)
Q Consensus 139 g~~~~i~~~sG~~a~~~ai~a~~~~----------gd~v~~~~~~h-~~~~~~~~~~g~------------~~~~~~~~d 195 (457)
|.+.+++++||++|+..+++++..+ +|.|++..+.| +.......+.+. .+..++++|
T Consensus 92 g~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 171 (392)
T 3ruy_A 92 NKEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYGD 171 (392)
T ss_dssp TCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTTC
T ss_pred CCCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCccc
Confidence 9999999999999999999877643 66888766655 544444444332 467788899
Q ss_pred HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-cc
Q psy15447 196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TE 270 (457)
Q Consensus 196 ~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~ 270 (457)
++++++.++ +++++|++++++|++|.+.| +++|+++|++||++||+||+|+. +|..|..+ .+
T Consensus 172 ~~~l~~~l~-----------~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~--~~~~g~~~~~~ 238 (392)
T 3ruy_A 172 LEALKAAIT-----------PNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTG--LGRTGKVFACD 238 (392)
T ss_dssp HHHHHHHCC-----------TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTT--TTTTSSSSGGG
T ss_pred HHHHHHHhc-----------cCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhC--CCccccchhhh
Confidence 999999885 25689999999999999998 99999999999999999999952 33334433 35
Q ss_pred ccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHH
Q psy15447 271 YFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLRE 347 (457)
Q Consensus 271 ~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~ 347 (457)
.+++.+ |++ |+||++++ ++|++++++++++.+........+ +.+++.++++.++++.++. +++++++++
T Consensus 239 ~~~~~~---d~~--~~SK~l~gG~~~~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~-~~~~~~~~~ 310 (392)
T 3ruy_A 239 WDNVTP---DMY--ILGKALGGGVFPISCAAANRDILGVFEPGSHGSTF--GGNPLACAVSIAALEVLEE-EKLTERSLQ 310 (392)
T ss_dssp GGTCCC---SEE--EECGGGGTTTSCCEEEEECHHHHTTCCTTSSCCSS--TTCHHHHHHHHHHHHHHHH-TTHHHHHHH
T ss_pred ccCCCC---CEE--EEchhhhCChhhhEEEEECHHHHhhhccCCcCCCC--CCCHHHHHHHHHHHHHHHh-hhHHHHHHH
Confidence 566654 665 78999964 469999999888776544433333 5699999999999998866 468899999
Q ss_pred HHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEE
Q psy15447 348 KCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRIT 427 (457)
Q Consensus 348 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~ 427 (457)
+.+++.+.|+++. .+.+... ++.+.++++.++.. ..++.+.|.++||.+.+.. .+++|++
T Consensus 311 ~~~~l~~~L~~~~-~~~~~~~-~~~g~~~~~~~~~~---------~~~l~~~l~~~gi~v~~~~---------~~~iRi~ 370 (392)
T 3ruy_A 311 LGEKLVGQLKEID-NPMITEV-RGKGLFIGIELNEP---------ARPYCEQLKAAGLLCKETH---------ENVIRIA 370 (392)
T ss_dssp HHHHHHHHHTTCC-CTTEEEE-EEETTEEEEEESSC---------SHHHHHHHHTTTEECCCBT---------TTEEEEC
T ss_pred HHHHHHHHHHHhc-CCCceEE-EeeeeEEEEEEcch---------HHHHHHHHHHCCcEEecCC---------CCEEEEE
Confidence 9999999998832 1234433 34577777777642 2468889999999988653 4799999
Q ss_pred ecCCCCHHHHHHHHHHHHHHH
Q psy15447 428 CNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 428 ~~~~~t~edi~~~~~~l~~~~ 448 (457)
++..+|++|+++++++|++++
T Consensus 371 ~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 371 PPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp CCTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999875
No 37
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=100.00 E-value=1.7e-36 Score=303.42 Aligned_cols=361 Identities=16% Similarity=0.146 Sum_probs=266.6
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeecCC---ccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFATHN---YLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++.+++|+++|. +|++|+||+++. ++|+ ++|++.+++.+++++++... ..++..+...+|+++|++++
T Consensus 23 ~~~~~~~~~g~~~~d~~g~~~id~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~~~~----~~~~~~~~~~~l~~~la~~~ 97 (426)
T 1sff_A 23 HPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGH-LHPKVVAAVEAQLKKLSHTC----FQVLAYEPYLELCEIMNQKV 97 (426)
T ss_dssp EEEEEEEEEBTEEEETTCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHTTTCSCCC----TTTEECHHHHHHHHHHHHHS
T ss_pred CCceEEecccCEEEeCCCCEEEEcccChhhcccCC-CCHHHHHHHHHHHHhCCCcc----ccccCCHHHHHHHHHHHHhC
Confidence 377889999999994 999999998764 5676 58999999999998754321 12445778899999999999
Q ss_pred -C-C-CcEEEecccHHHHHHHHH---hhcCCCCEEEEeCcccHHHHHHHHhcCCe-------------EEEecC-----C
Q psy15447 139 -G-L-EETALYSFGFSTSASAIA---AYVKRNDAVFVDENINFAIQTGLIASRCK-------------VQYFKH-----N 194 (457)
Q Consensus 139 -g-~-~~~i~~~sG~~a~~~ai~---a~~~~gd~v~~~~~~h~~~~~~~~~~g~~-------------~~~~~~-----~ 194 (457)
| . +.++++++|++|+..+++ ++++++++|+.+..+|+.....+...|.+ +..++. +
T Consensus 98 ~~~~~~~v~~~~g~~~a~~~~~~~a~~~~~~~~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~ 177 (426)
T 1sff_A 98 PGDFAKKTLLVTTGSEAVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHG 177 (426)
T ss_dssp SCSSCEEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGT
T ss_pred CcccccEEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccc
Confidence 5 4 567888899999999988 67788866666677777776677766542 444443 2
Q ss_pred -----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCC
Q psy15447 195 -----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTG 265 (457)
Q Consensus 195 -----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g 265 (457)
|++++++.+++... ++++++|+++|+++++|.+.+ +++|+++|++||++||+||+|+ + +++.|
T Consensus 178 ~~~~~d~~~l~~~l~~~~~------~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~-~~~~g 249 (426)
T 1sff_A 178 ISEDDAIASIHRIFKNDAA------PEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQS-G-AGRTG 249 (426)
T ss_dssp BCHHHHHHHHHHHHHHTCC------GGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTT-T-TTTTS
T ss_pred cchHHHHHHHHHHHHhccC------CCceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-c-cCccc
Confidence 67888888864210 135678999988777997777 9999999999999999999998 3 44444
Q ss_pred Ccc-ccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHH
Q psy15447 266 HGV-TEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSL 341 (457)
Q Consensus 266 ~~~-~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~ 341 (457)
... .+.+++.+ |++ ||||++|+ | ||+++++++++.+.... ...+.+.+++.++++.++++.+++. ++
T Consensus 250 ~~~~~~~~~~~~---di~--s~sK~~~~-GlriG~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~a~~aal~~~~~~-~~ 320 (426)
T 1sff_A 250 TLFAMEQMGVAP---DLT--TFAKSIAG-GFPLAGVTGRAEVMDAVAPGG--LGGTYAGNPIACVAALEVLKVFEQE-NL 320 (426)
T ss_dssp SSSGGGGTTSCC---SEE--EECGGGGT-SSCCEEEEEEHHHHTTSCTTS--BCCSSSSCHHHHHHHHHHHHHHHHT-TH
T ss_pred chhhhhhcCCCC---CEE--EEcccccC-CCceEEEEEcHHHHhhhccCC--cCcCCCCCHHHHHHHHHHHHHHHhc-CH
Confidence 433 34555544 665 89999986 6 99999998887665322 2334456999999999999988764 57
Q ss_pred HHHHHHHHHHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCccccCC
Q psy15447 342 LTKLREKCNTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLDQEAKK 419 (457)
Q Consensus 342 ~~~l~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~ 419 (457)
.++++++.+++++.|+++.. ++.+... .+.+.++++.+...... ........++.+.|.++||.+.++..
T Consensus 321 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~------- 392 (426)
T 1sff_A 321 LQKANDLGQKLKDGLLAIAEKHPEIGDV-RGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGP------- 392 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTEEEE-EEETTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEEST-------
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCC-------
Confidence 88999999999998876321 2233322 23478888888531000 00011456789999999999987652
Q ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 420 QKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 420 ~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
..+++|++++..+|++|+++++++|++++++++|
T Consensus 393 ~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~~~ 426 (426)
T 1sff_A 393 YYNVLRILVPLTIEDAQIRQGLEIISQCFDEAKQ 426 (426)
T ss_dssp TSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEECCccCCHHHHHHHHHHHHHHHHHHhC
Confidence 1478999999899999999999999999987754
No 38
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=100.00 E-value=4.2e-37 Score=310.35 Aligned_cols=378 Identities=14% Similarity=0.141 Sum_probs=263.6
Q ss_pred ChhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhc
Q psy15447 35 HTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKN 110 (457)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~ 110 (457)
+++++.+...+..|.+..++..... ..|+++++++|.++|+ ||++||||+++ +++|+ .+|++.+|+.+++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~G~~~~d~~g~~~iD~~~~~~~~~lg~-~~~~v~~a~~~~~~~- 88 (453)
T 2cy8_A 13 GSVFWAQRARSVMPDGVTADTRAFD--PHGLFISDAQGVHKTDVDGNVYLDFFGGHGALVLGH-GHPRVNAAIAEALSH- 88 (453)
T ss_dssp HHHHHHHHHHHHSCCC------CCS--SCCCCEEEEEBTEEEETTCCEEEESCTTTTSCTTCB-TCHHHHHHHHHHHTT-
T ss_pred hhHHHHHHHHhhcCCCCCccccccC--CCCceEEEeecCEEEECCCCEEEECcccHhhcccCC-CCHHHHHHHHHHHHh-
Confidence 3556777777777665544322211 2478899999999994 99999999887 56777 689999999999976
Q ss_pred CCCCCCCCCcccChHHHHHHHHHHHhhc-CCCcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHh---
Q psy15447 111 GVGSCGPRGFYGTNVVHLDLENDIASFM-GLEETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIA--- 183 (457)
Q Consensus 111 ~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~--- 183 (457)
+..+ .+..+...++++++++.+ +.+.+++++||++|+..++++ +++++++|+.+..+|+........
T Consensus 89 ~~~~------~~~~~~~~~la~~l~~~~~~~~~v~~~~gg~eA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 162 (453)
T 2cy8_A 89 GVQY------AASHPLEVRWAERIVAAFPSIRKLRFTGSGTETTLLALRVARAFTGRRMILRFEGHYHGWHDFSASGYNS 162 (453)
T ss_dssp TCSS------CSSCHHHHHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHHHHCCCEEEEECC---------------
T ss_pred CCCC------CCCCHHHHHHHHHHHhhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCcCCCchhhHhhcCC
Confidence 3221 135778888999998887 577889999999999999998 778877777777777654432211
Q ss_pred -------cCC------eEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHc
Q psy15447 184 -------SRC------KVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKY 246 (457)
Q Consensus 184 -------~g~------~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~ 246 (457)
.|. .+..++++|++++++.+++.. +++++|++||+++++|.+.| +++|+++|++|
T Consensus 163 ~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~--------~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~ 234 (453)
T 2cy8_A 163 HFDGQPAPGVLPETTANTLLIRPDDIEGMREVFANHG--------SDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQY 234 (453)
T ss_dssp -------------CGGGEEEECTTCHHHHHHHHHHHG--------GGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHT
T ss_pred ccCCCcCCCCCccccCceeecCCCCHHHHHHHHHhcC--------CCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHc
Confidence 132 356778889999999997532 35689999999988998887 99999999999
Q ss_pred CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhh--CC-cceecCCCc
Q psy15447 247 QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLS--GS-GYCFSASLP 321 (457)
Q Consensus 247 g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~--~~-~~~~~~~~~ 321 (457)
|++||+||+|+..+.|. .+..+++++.| |++ |+||++|+ ++|++++++++++.+... .. ....+.+.+
T Consensus 235 g~~lI~DEv~~g~~~g~--~~~~~~~~~~~---di~--s~sK~l~~G~~~G~v~~~~~~~~~l~~~~~~~~~~~~t~~~n 307 (453)
T 2cy8_A 235 GALFILDEVISGFRVGN--HGMQALLDVQP---DLT--CLAKASAGGLPGGILGGREDVMGVLSRGSDRKVLHQGTFTGN 307 (453)
T ss_dssp TCEEEEECTTTTTTTCT--THHHHHHTCCC---SEE--EEEGGGGTTSSCEEEEECHHHHTTSSSCC---------CCCC
T ss_pred CCEEEEecCccccccCc--hhhhHHhCCCC---cEE--EEChhhhCCcceEEEechHHHHHHhccccCCCceeCCCCCCC
Confidence 99999999997222221 23345677766 665 89999964 669999999888776541 10 111233569
Q ss_pred HHHHHHHHHHHHH-HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecC-----Ccch-------HH
Q psy15447 322 PFLAVAANKALHL-LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQK-----SDDE-------VA 388 (457)
Q Consensus 322 ~~~~aaa~a~l~~-~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~~~-------~~ 388 (457)
|++++++.++++. + . +++.++++++.+++++.|+++....++....++.+.++++.+.. .... ..
T Consensus 308 ~~~~aa~~aal~~~~-~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 385 (453)
T 2cy8_A 308 PITAAAAIAAIDTIL-E-DDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARP 385 (453)
T ss_dssp HHHHHHHHHHHHHHH-H-TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCC
T ss_pred HHHHHHHHHHHHHHh-h-hhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeccccccccccccccccccc
Confidence 9999999999997 6 3 34788999999999999977311013222124567889998874 2000 00
Q ss_pred HHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 389 SKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 389 ~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+.....++++.|+++||++.+. +.+| ++..+|++|+++++++|+++++++.
T Consensus 386 ~~~~~~~l~~~l~~~Gv~v~~~-----------~~~~--l~~~~t~~~i~~~l~~l~~~l~~~~ 436 (453)
T 2cy8_A 386 DVKMIAAMRMALILEGVDIGGR-----------GSVF--LSAQHEREHVEHLVTTFDRVLDRLA 436 (453)
T ss_dssp CHHHHHHHHHHHHHTTEECBTT-----------TEEE--CCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHCCeEEeCC-----------CCEE--eeccCCHHHHHHHHHHHHHHHHHHH
Confidence 0113567899999999998431 2344 5688999999999999999988764
No 39
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=100.00 E-value=1.5e-36 Score=304.55 Aligned_cols=362 Identities=15% Similarity=0.126 Sum_probs=261.8
Q ss_pred CceeeecCCCcEEE-ECCeeeEEeecCC---ccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVN-INGIPCINFATHN---YLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~-~~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++.+++|+++| .+|++|+||+++. ++|+ ++|++.+|+.+++++++..+ ..+..+...+++++|++++
T Consensus 25 ~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~-----~~~~~~~~~~l~~~la~~~ 98 (433)
T 1zod_A 25 EPMIIERAKGSFVYDADGRAILDFTSGQMSAVLGH-CHPEIVSVIGEYAGKLDHLF-----SEMLSRPVVDLATRLANIT 98 (433)
T ss_dssp CSSCCCEEEBTEEECTTCCEEEETTHHHHTCTTCB-TCHHHHHHHHHHHHHCCCCC-----TTCCCHHHHHHHHHHHHHS
T ss_pred CCceEEEeecCEEEeCCCCEEEEcccchhccccCC-CCHHHHHHHHHHHHhCcccc-----cccCCHHHHHHHHHHHHhC
Confidence 37788999999999 5999999997653 4565 58999999999998864321 1235678899999999999
Q ss_pred C--CCcEEEecccHHHHHHHHHhhc--CCCC-EEEEeCcccHHHHHHHHhc-------------CCeEEEec------CC
Q psy15447 139 G--LEETALYSFGFSTSASAIAAYV--KRND-AVFVDENINFAIQTGLIAS-------------RCKVQYFK------HN 194 (457)
Q Consensus 139 g--~~~~i~~~sG~~a~~~ai~a~~--~~gd-~v~~~~~~h~~~~~~~~~~-------------g~~~~~~~------~~ 194 (457)
+ .+.+++++||++|+..+++++. ..++ +|+.+..+|+.....+... +.....++ ++
T Consensus 99 ~~~~~~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 178 (433)
T 1zod_A 99 PPGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFE 178 (433)
T ss_dssp CTTCCEEEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCE
T ss_pred CCCcCEEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccC
Confidence 7 4678888899999999998643 2244 4455556787766665543 22222222 23
Q ss_pred ---------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcc-ccc
Q psy15447 195 ---------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVS-FGT 260 (457)
Q Consensus 195 ---------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~-~g~ 260 (457)
|++++++.+++.. ++++++|++||+++++|.+.| +++|+++|++||++||+||+|+ +|+
T Consensus 179 ~~~~~~~~~d~~~le~~l~~~~-------~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~ 251 (433)
T 1zod_A 179 RNGAYDYLAELDYAFDLIDRQS-------SGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGR 251 (433)
T ss_dssp ETTEECHHHHHHHHHHHHHHHC-------CSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTT
T ss_pred CchhhhHHHHHHHHHHHHHhcC-------CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCc
Confidence 3888888887532 135689999999989998766 9999999999999999999997 544
Q ss_pred ccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC
Q psy15447 261 LGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN 338 (457)
Q Consensus 261 ~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~ 338 (457)
.|. .+..+++++.| |++ |+||++|+ +.|++++++++++.+.........+.+.++++++++.++++.+++.
T Consensus 252 ~g~--~~~~~~~~~~~---di~--s~sK~~~~G~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~~ 324 (433)
T 1zod_A 252 TGT--MFACQRDGVTP---DIL--TLSKTLGAGLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRD 324 (433)
T ss_dssp TSS--SSTHHHHTCCC---SEE--EECHHHHTTSSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHT
T ss_pred Cch--HhHHhhcCCCC---CEE--EecccccCCCCeeEEEEhHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhC
Confidence 432 12346667665 565 89999974 2389999999998887532221134456999999999999988764
Q ss_pred cHHHHHHHHHHHHHHHHhhccc-ccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCccc
Q psy15447 339 PSLLTKLREKCNTMHSLLSQHK-VTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLDQE 416 (457)
Q Consensus 339 ~~~~~~l~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~ 416 (457)
++.++++++++++++.|+++. ..+.+... ++.+.++++.+...... ........++.+.|+++||++.++..
T Consensus 325 -~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---- 398 (433)
T 1zod_A 325 -GLVARANVMGDRLRRGLLDLMERFDCIGDV-RGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQL---- 398 (433)
T ss_dssp -THHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECC----
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCC----
Confidence 478999999999999987732 12333332 34577888876531000 00001356789999999999987652
Q ss_pred cCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 417 AKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 417 ~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+..++++||+++..+|++|+++++++|+++++++
T Consensus 399 -~~~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 399 -PGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIERA 432 (433)
T ss_dssp -TTSCCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCCEEEEECCcCCCHHHHHHHHHHHHHHHHHh
Confidence 1124799999999999999999999999988764
No 40
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=100.00 E-value=4.6e-36 Score=300.61 Aligned_cols=349 Identities=12% Similarity=0.065 Sum_probs=259.2
Q ss_pred cee-eecCCCcEEEE-CCeeeEEeecCC---ccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 64 KYV-VDQKSGYIVNI-NGIPCINFATHN---YLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 64 ~~~-i~~~~g~~~~~-~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
|++ +.+++|+++|+ +|++|+|++++. ++|+ .+|++.+|+.++++++...+. + .+..+...++++++++++
T Consensus 25 ~~~~~~~~~g~~~~d~~g~~ylD~~~~~~~~~lg~-~~p~v~~a~~~~~~~~~~~~~-~---~~~~~~~~~l~~~la~~~ 99 (429)
T 1s0a_A 25 PVYPVVSAEGCELILSDGRRLVDGMSSWWAAIHGY-NHPQLNAAMKSQIDAMSHVMF-G---GITHAPAIELCRKLVAMT 99 (429)
T ss_dssp CCEEEEEEEBTEEEETTSCEEEESSTTTTTCTTCB-SCHHHHHHHHHHHHHCSCCCC-S---SEECHHHHHHHHHHHHHS
T ss_pred CceeEEeeeeeEEEeCCCCEEEEcCccHhhccCCC-CCHHHHHHHHHHHHhcccccc-c---ccCCHHHHHHHHHHHHhC
Confidence 444 88999999995 999999998864 4555 489999999999987543211 1 124567889999999999
Q ss_pred C--CCcEEEecccHHHHHHHHHhhc---C----CCCEEEEeC-cccHHHHHHHHhcC---------------CeEEEec-
Q psy15447 139 G--LEETALYSFGFSTSASAIAAYV---K----RNDAVFVDE-NINFAIQTGLIASR---------------CKVQYFK- 192 (457)
Q Consensus 139 g--~~~~i~~~sG~~a~~~ai~a~~---~----~gd~v~~~~-~~h~~~~~~~~~~g---------------~~~~~~~- 192 (457)
+ .++++++++|++|+..+++++. + +++.|++.. .+|+.....+.+.+ .....++
T Consensus 100 ~~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (429)
T 1s0a_A 100 PQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQ 179 (429)
T ss_dssp CTTCCEEEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCC
T ss_pred CCCCCEEEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCc
Confidence 5 5678889999999999988653 3 477666655 56766555554432 3333333
Q ss_pred --------CCCHHHHHHHHHhhchhcccCCCCccEEEEEecC-CCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcc-c
Q psy15447 193 --------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV-YMNSADICP----LKDILSLRSKYQARIFVDESVS-F 258 (457)
Q Consensus 193 --------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v-~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~-~ 258 (457)
++|++++++.+++.. +++++|+++|+ +|++|.+.| +++|+++|++||++||+||+|+ +
T Consensus 180 ~~~~~~~~~~d~~~l~~~l~~~~--------~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~ 251 (429)
T 1s0a_A 180 SRMDGEWDERDMVGFARLMAAHR--------HEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGF 251 (429)
T ss_dssp SBC-CCCCGGGGHHHHHHHHHHT--------TTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred ccccccchHHHHHHHHHHHHhCC--------CCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCC
Confidence 357899999887532 35689999999 889998777 9999999999999999999997 5
Q ss_pred ccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhC-Cc--ceecCCCcHHHHHHHHHHH
Q psy15447 259 GTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSG-SG--YCFSASLPPFLAVAANKAL 332 (457)
Q Consensus 259 g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~aaa~a~l 332 (457)
|..|. .+..+++++.+ |++ |+||++++ +.|++++++++++.+.... .. ...+.+.++++++++.+++
T Consensus 252 g~~g~--~~~~~~~~~~~---d~~--t~sK~l~~G~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal 324 (429)
T 1s0a_A 252 GRTGK--LFACEHAEIAP---DIL--CLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASL 324 (429)
T ss_dssp TTTSS--SSGGGGGTCCC---SEE--EECGGGGTSSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHH
T ss_pred cccch--HHHhhhcCCCC---CEE--EecccccCCCccceEEEeCHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHH
Confidence 44332 12345566655 665 79999974 3489999999988886431 11 1233456999999999999
Q ss_pred HHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc
Q psy15447 333 HLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH 412 (457)
Q Consensus 333 ~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~ 412 (457)
+.+++. +..++++++++++.+.|+++...+++... ++.+.++++.+.... ...++.+.|+++||++++.
T Consensus 325 ~~~~~~-~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-~~~g~~~~~~~~~~~-------~~~~l~~~l~~~Gi~v~~~-- 393 (429)
T 1s0a_A 325 AILESG-DWQQQVADIEVQLREQLAPARDAEMVADV-RVLGAIGVVETTHPV-------NMAALQKFFVEQGVWIRPF-- 393 (429)
T ss_dssp HHHHTC-HHHHHHHHHHHHHHHHHGGGGGCTTEEEE-EEETTEEEEEESSCB-------CHHHHHHHHHHTTEECCCB--
T ss_pred HHHHhC-CHHHHHHHHHHHHHHHHHHHhcCCCEEEE-EEeeEEEEEEECCcc-------cHHHHHHHHHHCCCEEecc--
Confidence 988664 57899999999999999874323455432 334678888876533 3457889999999998763
Q ss_pred CccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 413 LDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 413 ~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
.+++||+++..+|++|+++++++|+++++++
T Consensus 394 --------~~~iRis~~~~~t~e~i~~~~~~l~~~~~~~ 424 (429)
T 1s0a_A 394 --------GKLIYLMPPYIILPQQLQRLTAAVNRAVQDE 424 (429)
T ss_dssp --------TTEEEECCCTTCCHHHHHHHHHHHHHHTSSG
T ss_pred --------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence 2689999999999999999999999887654
No 41
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=100.00 E-value=7.3e-37 Score=303.25 Aligned_cols=344 Identities=17% Similarity=0.147 Sum_probs=264.4
Q ss_pred CCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q psy15447 62 SSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASF 137 (457)
Q Consensus 62 ~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~ 137 (457)
..|+++.+++|+++|+ +|++|+||+++ +++|+ .+|++.+++.+++++++..+. . ...+...+++++++++
T Consensus 21 ~~~~~~~~~~g~~~~d~~g~~~ld~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~~~~~---~--~~~~~~~~l~~~la~~ 94 (397)
T 2ord_A 21 RFPATFVYGKGSWIYDEKGNAYLDFTSGIAVNVLGH-SHPRLVEAIKDQAEKLIHCSN---L--FWNRPQMELAELLSKN 94 (397)
T ss_dssp CCSCEEEEEEBTEEEETTCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHHHCSCCCT---T--SEEHHHHHHHHHHHHT
T ss_pred CCCceEEeeecCEEEECCCCEEEECCccccccccCC-CCHHHHHHHHHHHHhcccCcc---c--cCCHHHHHHHHHHHHh
Confidence 3578899999999995 99999999887 77888 589999999999988654321 1 1467889999999999
Q ss_pred cCCCcEEEecccHHHHHHHHHhhcC------C--CCEEEEeCcccHHHHHHHHhcCCe------------EEEecCCCHH
Q psy15447 138 MGLEETALYSFGFSTSASAIAAYVK------R--NDAVFVDENINFAIQTGLIASRCK------------VQYFKHNNMQ 197 (457)
Q Consensus 138 ~g~~~~i~~~sG~~a~~~ai~a~~~------~--gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~d~~ 197 (457)
+|.+.++++++|++|+..+++++.. + +++|+.+..+|+.+...++..|.+ +..++.+|++
T Consensus 95 ~g~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~ 174 (397)
T 2ord_A 95 TFGGKVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFNNVE 174 (397)
T ss_dssp TTSCEEEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECTTCHH
T ss_pred cCCCeEEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecCCCHH
Confidence 9998899999999999999988752 3 345556666777777677777765 7788889999
Q ss_pred HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCC-CC---ChHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-cccc
Q psy15447 198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD-IC---PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYF 272 (457)
Q Consensus 198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~-i~---~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~ 272 (457)
++++.+++ ++++|++++++||+|. +. ++++|+++|++||++||+||+|+ | ++..|... ...+
T Consensus 175 ~l~~~l~~-----------~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~-~~~~g~~~~~~~~ 241 (397)
T 2ord_A 175 DLRRKMSE-----------DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQC-G-MGRTGKLFAYQKY 241 (397)
T ss_dssp HHHHHCCT-----------TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTT-T-TTTTSSSSHHHHH
T ss_pred HHHHHhhc-----------CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-C-CccCccchhhhhh
Confidence 99988742 4689999999999999 44 48899999999999999999997 3 34444433 2445
Q ss_pred CCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Q psy15447 273 GVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCN 350 (457)
Q Consensus 273 ~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~ 350 (457)
++.+ |++ |+||++|+ +.|+++++++++ .++..... .+.+.+++.++++.++++.+++ ++++++++++++
T Consensus 242 ~~~~---d~~--s~sK~~~~G~r~G~~~~~~~~~-~l~~~~~~--~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~ 312 (397)
T 2ord_A 242 GVVP---DVL--TTAKGLGGGVPIGAVIVNERAN-VLEPGDHG--TTFGGNPLACRAGVTVIKELTK-EGFLEEVEEKGN 312 (397)
T ss_dssp TCCC---SEE--EECGGGGTTSCCEEEEECSTTC-CCCTTSSC--CSSTTCHHHHHHHHHHHHHHTS-TTHHHHHHHHHH
T ss_pred CCCC---Cee--eeccccCCCcCeEEEEEchHhc-ccCCCCcC--CCCCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHH
Confidence 6544 665 88999973 358888887765 44322222 2334689999999999988766 468899999999
Q ss_pred HHHHHhhccc-ccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEec
Q psy15447 351 TMHSLLSQHK-VTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCN 429 (457)
Q Consensus 351 ~l~~~L~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~ 429 (457)
++.+.|+++. ..+.+... ++.+.++++.+.... ...++.+.|.++||.+.+.. ++.+|++++
T Consensus 313 ~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~~~~-------~~~~l~~~l~~~gi~v~~~~---------~~~iRis~~ 375 (397)
T 2ord_A 313 YLMKKLQEMKEEYDVVADV-RGMGLMIGIQFREEV-------SNREVATKCFENKLLVVPAG---------NNTIRFLPP 375 (397)
T ss_dssp HHHHHHHHHHHHCTTEEEE-EEETTEEEEEECTTS-------CHHHHHHHHHHTTEECEEET---------TTEEEECCC
T ss_pred HHHHHHHHHHHhCCceEEE-EEEeEEEEEEECChH-------HHHHHHHHHHHCCCEEccCC---------CCEEEEECC
Confidence 9999998731 11222211 335678888876543 35678999999999988653 478999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q psy15447 430 ISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 430 ~~~t~edi~~~~~~l~~~~~~ 450 (457)
..+|++|+++++++|++++++
T Consensus 376 ~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 376 LTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp TTCCHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHHHhh
Confidence 899999999999999998764
No 42
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=100.00 E-value=3.8e-37 Score=309.99 Aligned_cols=344 Identities=11% Similarity=0.054 Sum_probs=253.2
Q ss_pred eecCCCcEEEE--CCeeeEEeecCC---ccCCCCChhhH-H-HHHH---HHHhcCCCCCCCCCcccChHHHHHHHHHHHh
Q psy15447 67 VDQKSGYIVNI--NGIPCINFATHN---YLSFVENPDIE-K-CAID---CIDKNGVGSCGPRGFYGTNVVHLDLENDIAS 136 (457)
Q Consensus 67 i~~~~g~~~~~--~G~~~id~~s~~---~l~~~~~p~i~-~-a~~~---~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~ 136 (457)
+++++|+++|+ ||++|+||+++. .+|+ +||++. + |+.+ ++.+..+. ++ .+..+...+++++|++
T Consensus 39 ~~~~~g~~~~d~~~g~~ylD~~~~~~~~~lG~-~~p~v~~~~A~~~~~~~~~~~~~~--~~---~~~~~~~~~la~~la~ 112 (449)
T 2cjg_A 39 LTRSGGSYLVDAITGRRYLDMFTFVASSALGM-NPPALVDDREFHAELMQAALNKPS--NS---DVYSVAMARFVETFAR 112 (449)
T ss_dssp TTTCBBTEEEBTTTCCEEEESSHHHHTCSSCB-SCHHHHTCHHHHHHHHHHHTCCCC--TT---TCCCHHHHHHHHHHHH
T ss_pred EeeeeeCEEEECCCCcEEEEccCCccccCCCC-CCHHHHHHHHHHHHHHHHHhcCCC--Cc---ccCCHHHHHHHHHHHH
Confidence 46999999984 899999997653 4455 389999 9 9999 88775321 11 1356788999999999
Q ss_pred hcC---CCcEEEecccHHHHHHHHHhhc---C----------C-CCEEEEe-CcccHHHHHHHHhcCC------------
Q psy15447 137 FMG---LEETALYSFGFSTSASAIAAYV---K----------R-NDAVFVD-ENINFAIQTGLIASRC------------ 186 (457)
Q Consensus 137 ~~g---~~~~i~~~sG~~a~~~ai~a~~---~----------~-gd~v~~~-~~~h~~~~~~~~~~g~------------ 186 (457)
+++ .+++++++||++|+..+++++. + + ++.|++. ..+|+.+..++...+.
T Consensus 113 ~~~~~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~ 192 (449)
T 2cjg_A 113 VLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFD 192 (449)
T ss_dssp HHCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCC
T ss_pred hcCCCCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCC
Confidence 984 5678899999999999997543 2 1 6655554 4577765544444432
Q ss_pred -eEEEecCCC--HHH-------------HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHc
Q psy15447 187 -KVQYFKHNN--MQH-------------LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKY 246 (457)
Q Consensus 187 -~~~~~~~~d--~~~-------------le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~ 246 (457)
.+..++++| .+. |++.+++.. +++++|++||++|++|.+.+ +++|+++|++|
T Consensus 193 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~--------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~ 264 (449)
T 2cjg_A 193 WPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRP--------HDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEF 264 (449)
T ss_dssp CCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHST--------TTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHT
T ss_pred CCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcC--------CceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHC
Confidence 566677766 433 777775422 46789999999999998777 99999999999
Q ss_pred CcEEEEEcCcccccccCCCCc-cccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHh--hC-CcceecCCCcH
Q psy15447 247 QARIFVDESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRL--SG-SGYCFSASLPP 322 (457)
Q Consensus 247 g~~li~DEa~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~--~~-~~~~~~~~~~~ 322 (457)
|++||+||+|+. +|++|.+ ..+++++.| |++ |+||++ +.|++++++++++.+.+ .. .....+.+.++
T Consensus 265 g~lli~DEv~~g--~g~~g~~~~~~~~~~~~---di~--t~sK~l--~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~ 335 (449)
T 2cjg_A 265 DALLIFDEVQTG--CGLTGTAWAYQQLDVAP---DIV--AFGKKT--QVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNL 335 (449)
T ss_dssp TCEEEEECTTTT--TTTTSSSSTHHHHTCCC---SEE--EECGGG--SSEEEEECGGGGGSTTCTTTSTTSSCCSSSSCH
T ss_pred CcEEEEeccccC--CCccCcceeecccCCCc---eEE--EecCcc--cEEEEEECHHHhhhhhhcccCCcccccCCCCCH
Confidence 999999999972 3344443 346677766 665 899999 67788888888775221 01 11223344689
Q ss_pred HHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccc-ccCC-eEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHH
Q psy15447 323 FLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHK-VTQR-FLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMC 400 (457)
Q Consensus 323 ~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~-~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 400 (457)
++++++.++++.+++ +++.++++++++++++.|+++. ..+. +... ++.+.++++.+.... ...++++.|
T Consensus 336 ~~~~aa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~~~g~~~~~~~~~~~-------~~~~~~~~l 406 (449)
T 2cjg_A 336 TDMVRARRILEVIEA-EGLFERAVQHGKYLRARLDELAADFPAVVLDP-RGRGLMCAFSLPTTA-------DRDELIRQL 406 (449)
T ss_dssp HHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEE-EEETTEEEEECSSHH-------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-eeccEEEEEEECChH-------HHHHHHHHH
Confidence 999999999998765 3578999999999999998732 1233 3332 345778887775422 456799999
Q ss_pred HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 401 IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 401 ~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+++||++.+.+ .+++|++|+..+|++|+++++++|+++++++
T Consensus 407 ~~~Gv~v~~~g---------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 407 WQRAVIVLPAG---------ADTVRFRPPLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp HHTTEECEEET---------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHCCeEEecCC---------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 99999988653 4799999999999999999999999998764
No 43
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=100.00 E-value=1.1e-36 Score=302.76 Aligned_cols=348 Identities=16% Similarity=0.189 Sum_probs=264.4
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|.++++++|.++|. +|++|+||+++ +++|+ ++|++.+++.+++.++...+. ....+...++++++++++
T Consensus 21 ~~~~~~~~~g~~~~~~~g~~~lD~~~~~~~~~lg~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~la~~~ 94 (406)
T 4adb_A 21 APFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGH-AHPELREALNEQASKFWHTGN-----GYTNEPVLRLAKKLIDAT 94 (406)
T ss_dssp CSSCEEEEEBTEEEETTCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCSCCCT-----TSCCHHHHHHHHHHHHHS
T ss_pred CCceEEeeccCEEEeCCCCEEEECCCchhhcccCC-CCHHHHHHHHHHHHhcccccC-----CcCCHHHHHHHHHHHhhC
Confidence 477899999999995 99999999987 78888 589999999999987433221 124677899999999999
Q ss_pred CCCcEEEecccHHHHHHHHHhhcC-------CC-CEEE-EeCcccHHHHHHHHhcC------------CeEEEecCCCHH
Q psy15447 139 GLEETALYSFGFSTSASAIAAYVK-------RN-DAVF-VDENINFAIQTGLIASR------------CKVQYFKHNNMQ 197 (457)
Q Consensus 139 g~~~~i~~~sG~~a~~~ai~a~~~-------~g-d~v~-~~~~~h~~~~~~~~~~g------------~~~~~~~~~d~~ 197 (457)
|.+.++++++|++|+..+++++.. +| |.|+ .+..+|+.........+ ..+..++++|++
T Consensus 95 ~~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 174 (406)
T 4adb_A 95 FADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDIN 174 (406)
T ss_dssp SCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTTCHH
T ss_pred CCCeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCCcHH
Confidence 999999999999999999998753 33 5554 55556766666665554 467788889999
Q ss_pred HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC-----ChHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccc
Q psy15447 198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC-----PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEY 271 (457)
Q Consensus 198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~-----~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~ 271 (457)
++++.++ +++++|+++|. |++|.+. ++++|+++|++||++||+||+|+ | ++..|..+ .+.
T Consensus 175 ~l~~~l~-----------~~~~~v~~~p~-np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~-~~~~g~~~~~~~ 240 (406)
T 4adb_A 175 SASALID-----------DSTCAVIVEPI-QGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQT-G-VGRTGELYAYMH 240 (406)
T ss_dssp HHHTTCS-----------TTEEEEEECSE-ETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-T-TTTTSSSSHHHH
T ss_pred HHHHHhc-----------CCeEEEEEeCC-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCccchhHHHHh
Confidence 9988774 35678888854 5666543 48999999999999999999996 2 34444433 355
Q ss_pred cCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHH
Q psy15447 272 FGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKC 349 (457)
Q Consensus 272 ~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~ 349 (457)
+++.+ |++ ||||++|+ ++|++++++++++.+.......++ +.+++.++++.++++.++. +++.+++++++
T Consensus 241 ~~~~~---d~~--t~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~ 312 (406)
T 4adb_A 241 YGVTP---DLL--TTAKALGGGFPVGALLATEECARVMTVGTHGTTY--GGNPLASAVAGKVLELINT-PEMLNGVKQRH 312 (406)
T ss_dssp HTCCC---SEE--EECGGGGTTSCCEEEEECHHHHHTCCTTSSCCSS--TTCHHHHHHHHHHHHHHSS-HHHHHHHHHHH
T ss_pred cCCCC---CEE--EechhhcCCCCeEEEEEcHHHHhhhccCCcCCCC--CCCHHHHHHHHHHHHHHHh-cCHHHHHHHHH
Confidence 66655 666 78999973 369999999998877654333333 4689999999999988754 56889999999
Q ss_pred HHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe
Q psy15447 350 NTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC 428 (457)
Q Consensus 350 ~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~ 428 (457)
+++.+.|+++.. ...+.. .+..+.++++.+...... ...++++.|.++||.+.+.. .+++|+++
T Consensus 313 ~~l~~~l~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~-----~~~~~~~~l~~~gi~v~~~~---------~~~iRi~~ 377 (406)
T 4adb_A 313 DWFVERLNTINHRYGLFSE-VRGLGLLIGCVLNADYAG-----QAKQISQEAAKAGVMVLIAG---------GNVVRFAP 377 (406)
T ss_dssp HHHHHHHHHHHHHHCCEEE-EEEETTEEEEEECTTTTT-----CHHHHHHHHHHTTEECEESS---------TTEEEECC
T ss_pred HHHHHHHHHHHHhCCCceE-EEEEEEEEEEEEeCCcHH-----HHHHHHHHHHHCCcEEeecC---------CCeEEEEC
Confidence 999999987321 111111 123477888887753100 24578999999999988643 47999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 429 NISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 429 ~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
+..+|++|+++++++|+++++++..
T Consensus 378 ~~~~~~e~i~~~~~~l~~~l~~~~~ 402 (406)
T 4adb_A 378 ALNVSEEEVTTGLDRFAAACEHFVS 402 (406)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999987754
No 44
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=6.3e-37 Score=304.47 Aligned_cols=357 Identities=13% Similarity=0.106 Sum_probs=268.7
Q ss_pred eeecCCCcEEEECCee----eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-
Q psy15447 66 VVDQKSGYIVNINGIP----CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL- 140 (457)
Q Consensus 66 ~i~~~~g~~~~~~G~~----~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~- 140 (457)
++..++|.+++.+|++ +|||+++++.++..+|++++++.+++.+.+.. ++....|..+++.++++.+++++|.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~--~y~~~~g~~~l~~~l~~~l~~~~g~~ 98 (407)
T 3nra_A 21 VRQSAAGLEALIRGAPIEGRPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQ--AYTEYRGDLGIRDLLAPRLAAFTGAP 98 (407)
T ss_dssp ------CCTTTCCSCCCCSCCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHH--HSCCTTCCHHHHHHHHHHHHHHHTSC
T ss_pred HHHHhhhhHHHhhcCCCCCceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCC--CcCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 4566777777766655 99999998887888999999999999863221 1222346788999999999999886
Q ss_pred ----CcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-----------CCHHHHHHHHHh
Q psy15447 141 ----EETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-----------NNMQHLEELLRQ 205 (457)
Q Consensus 141 ----~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----------~d~~~le~~l~~ 205 (457)
+.++++++|++|+..++.+++++||.|+++.++|.++...++..|.++..+++ .|++++++.+++
T Consensus 99 ~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 178 (407)
T 3nra_A 99 VDARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA 178 (407)
T ss_dssp CCTTTSEEEESHHHHHHHHHHHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT
T ss_pred CCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh
Confidence 57888889999999999999999999999999999999999999999988876 279999998864
Q ss_pred hchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEE
Q psy15447 206 QDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMI 282 (457)
Q Consensus 206 ~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~ 282 (457)
++++|++++++||+|.+.| +++|+++|++||+++|+||+|+.+.++..+.......+....+.+++
T Consensus 179 -----------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~ 247 (407)
T 3nra_A 179 -----------GARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVT 247 (407)
T ss_dssp -----------TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEE
T ss_pred -----------CCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEE
Confidence 3357777888999999999 89999999999999999999987666532222222222011345699
Q ss_pred EecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhc
Q psy15447 283 IGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQ 358 (457)
Q Consensus 283 ~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~ 358 (457)
++|+||++|..| ||+++++++++.++.....+.+ +.+++.++++.++++...+ .++.+++++++.+++.+.|++
T Consensus 248 ~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 325 (407)
T 3nra_A 248 IMGPSKTESLSGYRLGVAFGSRAIIARMEKLQAIVSL--RAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRG 325 (407)
T ss_dssp EECSSSTTCCGGGCCEEEEECHHHHHHHHHHHHHHTS--SSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeCcccccCCCeeeEEEEEcCHHHHHHHHHHHhhhcc--CCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999998655 9999999999888765433333 3467776666666542111 134677888889999999988
Q ss_pred ccccCCeEEeccCCCCeEEEEecC-CcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHH
Q psy15447 359 HKVTQRFLVQGHRDTPLKYLYLQK-SDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQD 436 (457)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ed 436 (457)
.+++.+..+..+.++++.+.. .. ...++.+.|++ +||++.++..+. +...+++|++++. |+++
T Consensus 326 ---~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRis~~~--~~~~ 390 (407)
T 3nra_A 326 ---CEGVFARTPQAGSYLFPRLPKLAV-------APAEFVKILRLQAGVVVTPGTEFS---PHTADSVRLNFSQ--DHEA 390 (407)
T ss_dssp ---STTCBCCCCSBSSEECCBCCCBSS-------CHHHHHHHHHHHHCEECEEGGGTC---TTCTTBEEEECCS--CHHH
T ss_pred ---CCCceeccCCeeEEEEEeCCCCCC-------CHHHHHHHHHHhCCEEEeCchhhC---CCCCCEEEEEeCC--CHHH
Confidence 457776545556777777664 22 34578888876 599999876542 2346899999984 9999
Q ss_pred HHHHHHHHHHHHHHhc
Q psy15447 437 MNSLIETLCKSHDIAV 452 (457)
Q Consensus 437 i~~~~~~l~~~~~~~~ 452 (457)
+++++++|++++++++
T Consensus 391 i~~~~~~l~~~~~~~~ 406 (407)
T 3nra_A 391 AVAAARRIVTLVERYR 406 (407)
T ss_dssp HHHHHHHHHHHHHHHB
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999988764
No 45
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=100.00 E-value=5.9e-36 Score=298.86 Aligned_cols=343 Identities=15% Similarity=0.127 Sum_probs=251.1
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeecCC---ccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFATHN---YLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++.+++|+++|. +|++|+||+++. ++|++.+|++.+|+.+++++... ++ . ..+..+...++++++++++
T Consensus 24 ~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~~-~~-~--~~~~~~~~~~l~~~la~~~ 99 (419)
T 2eo5_A 24 FPLVIDHGEGVWIYDVDGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAH-AA-A--NDFYNIPQLELAKKLVTYS 99 (419)
T ss_dssp CCCCEEEEEBTEEEETTSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCC-CS-C--SCSCCHHHHHHHHHHHHHS
T ss_pred CCceEEeeecCEEEECCCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCcc-cc-c--cccCCHHHHHHHHHHHHhC
Confidence 477889999999995 999999998864 55654489999999999987532 11 1 1235677899999999999
Q ss_pred CC---CcEEEecccHHHHHHHHHhhcC-CCCEEEEe-CcccHHHHHHHHhcC-------------CeEEEecCC------
Q psy15447 139 GL---EETALYSFGFSTSASAIAAYVK-RNDAVFVD-ENINFAIQTGLIASR-------------CKVQYFKHN------ 194 (457)
Q Consensus 139 g~---~~~i~~~sG~~a~~~ai~a~~~-~gd~v~~~-~~~h~~~~~~~~~~g-------------~~~~~~~~~------ 194 (457)
|. ++++++++|++|+..+++++.. +||.|++. ..+|+.+.....+.+ ..+..++.+
T Consensus 100 ~~~~~~~v~~~~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 179 (419)
T 2eo5_A 100 PGNFQKKVFFSNSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNP 179 (419)
T ss_dssp SCSSCEEEEEESSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCT
T ss_pred CCCcCCEEEEeCchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCcccccc
Confidence 85 3678888999999999987654 26666554 457776666655433 235555543
Q ss_pred ---------------CHHHHH-HHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q psy15447 195 ---------------NMQHLE-ELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDE 254 (457)
Q Consensus 195 ---------------d~~~le-~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DE 254 (457)
|+++++ +.+++.. +++++++|+++|+++++|.+.| +++|+++|++||++||+||
T Consensus 180 ~g~~~~~~~~~~~~~~~~~l~~~~i~~~~------~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE 253 (419)
T 2eo5_A 180 WHINGYENPSELVNRVIEFIEDYIFVNLV------PPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDE 253 (419)
T ss_dssp TCCCTTTCHHHHHHHHHHHHHHTHHHHTC------CGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEEC
T ss_pred ccccccccchhhHHHHHHHHHHHHHhhcc------CCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 256777 7775421 0135679999999888998766 9999999999999999999
Q ss_pred Ccc-cccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHH
Q psy15447 255 SVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANK 330 (457)
Q Consensus 255 a~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a 330 (457)
+|+ +|..|. .+..+++++.| |++ ||||++|+ +.|+++++++++ .+ ... ...+.+.++++++++.+
T Consensus 254 ~~~~~g~~g~--~~~~~~~~~~~---d~~--t~sK~~~~G~~riG~~~~~~~~~-~~-~~~--~~~t~~~n~~~~~aa~a 322 (419)
T 2eo5_A 254 VQMGLGRTGK--LFAIENFNTVP---DVI--TLAKALGGGIMPIGATIFRKDLD-FK-PGM--HSNTFGGNALACAIGSK 322 (419)
T ss_dssp TTTTTTTTSS--SSGGGGGTCCC---SEE--EECGGGGTTTSCCEEEEEEGGGC-CC---------CCCCCHHHHHHHHH
T ss_pred cccCCccCcc--hhhHHhcCCCC---CEE--EecccccCCccceEEEEEchHhh-cC-Ccc--cCCCCCCCHHHHHHHHH
Confidence 997 544432 12345667655 565 89999974 228999988876 55 222 22334569999999999
Q ss_pred HHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecc
Q psy15447 331 ALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCP 410 (457)
Q Consensus 331 ~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~ 410 (457)
+++.+++ +.++++++++++.+.|+++ +... ++.+.++++.+.... .... +++.|+++||++++.
T Consensus 323 al~~~~~---~~~~~~~~~~~l~~~L~~~-----~~~~-~~~g~~~~i~~~~~~------~~~~-~~~~l~~~Gv~v~~~ 386 (419)
T 2eo5_A 323 VIDIVKD---LLPHVNEIGKIFAEELQGL-----ADDV-RGIGLAWGLEYNEKK------VRDR-IIGESFKRGLLLLPA 386 (419)
T ss_dssp HHHHHHH---HHHHHHHHHHHHHHHHTTS-----SSEE-EEETTEEEEECSCHH------HHHH-HHHHHHHTTEECEEE
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHh-----hhhe-EeeeEEEEEEEecCc------cHHH-HHHHHHHCCCEEecC
Confidence 9988754 7889999999999999882 2111 345778888774211 1345 889999999999875
Q ss_pred ccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 411 SHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 411 ~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
. .+++||+++..+|++|+++++++|+++++++
T Consensus 387 ~---------~~~lRis~~~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 387 G---------RSAIRVIPPLVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp T---------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred C---------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 3 4789999999999999999999999988764
No 46
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=3.4e-35 Score=293.52 Aligned_cols=353 Identities=12% Similarity=0.087 Sum_probs=265.0
Q ss_pred CceeeecCCCcEEEE-C--CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447 63 SKYVVDQKSGYIVNI-N--GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG 139 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~--G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g 139 (457)
.+++..+++|+++|+ + |++||||..++. .+..+|++.+++.+++.+...++.. ...+...++++.+++.+|
T Consensus 41 ~~~~~~~g~g~~~~d~~~~g~~~i~~~~~~~-~~~~~~~v~~a~~~~~~~~~~~y~~-----~~~~l~~~l~~~l~~~~g 114 (421)
T 3l8a_A 41 TTRPDRLNQFTYKWKTSENNPELLQMWVADM-DFLPVPEIKEAIINYGREHIFGYNY-----FNDDLYQAVIDWERKEHD 114 (421)
T ss_dssp SCCCCCTTTTBTTTGGGTTCTTCEECCSSCC-CSCCCHHHHHHHHHHHHHCCSSCBC-----CCHHHHHHHHHHHHHHHC
T ss_pred CcccccCCCCCccccccCCCCCeeecccCCC-CCCCCHHHHHHHHHHHhcCCcCCCC-----CCHHHHHHHHHHHHHHhC
Confidence 456677899999994 6 899999977653 5557899999999999873222211 136777888888888777
Q ss_pred ----CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC--------CHHHHHHHHHhhc
Q psy15447 140 ----LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN--------NMQHLEELLRQQD 207 (457)
Q Consensus 140 ----~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~--------d~~~le~~l~~~~ 207 (457)
.+.++++++|++|+..++++++++||.|++..+.|..+...+...|.++..++.+ |++++++.+++
T Consensus 115 ~~~~~~~v~~~~g~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~-- 192 (421)
T 3l8a_A 115 YAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIID-- 192 (421)
T ss_dssp CCCCGGGEEEESCHHHHHHHHHHHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHH--
T ss_pred CCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhc--
Confidence 3457777888899999999999999999999999999888888899888877643 89999999974
Q ss_pred hhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC--CCccEE
Q psy15447 208 ERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST--EEVDMI 282 (457)
Q Consensus 208 ~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~--~~~Di~ 282 (457)
+++++|++++++|++|.+.| +++|+++|++||++||+||+|+.+.+ +|........+.+ .+.+++
T Consensus 193 --------~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~--~g~~~~~~~~~~~~~~~~~i~ 262 (421)
T 3l8a_A 193 --------NNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLAL--FGNTHHSLNTLDASYKDFTII 262 (421)
T ss_dssp --------TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBC--TTCCCCCGGGSCTTGGGTEEE
T ss_pred --------cCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcccccccc--CCCCCccHHHcCchhcCcEEE
Confidence 35678889999999998854 88999999999999999999975433 2332222223322 245688
Q ss_pred EecCcccccCcc---cEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhh
Q psy15447 283 IGSLEHALGSVG---GFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLS 357 (457)
Q Consensus 283 ~~s~sK~lg~~g---G~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~ 357 (457)
+.|+||++|..| |+++++ +++++.+......+.+ .+.++++++++.++++..++ .++++++++++.+++.+.|+
T Consensus 263 ~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~~~~~-~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~ 341 (421)
T 3l8a_A 263 LSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLANNQ-HEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELE 341 (421)
T ss_dssp EECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTC-SCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeChhhccCchhheEeEEcCCHHHHHHHHHHHHhccc-CCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999997554 898887 8888877654322222 24688999999888875332 24567888889999999998
Q ss_pred cccccCCeEEeccCCCCeEEEEecCC-cchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447 358 QHKVTQRFLVQGHRDTPLKYLYLQKS-DDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQ 435 (457)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e 435 (457)
+ .+++.+..+..+.+.++.+... . ...++.+.|+++ ||++.++..+. ....+++||+++ ++++
T Consensus 342 ~---~~~i~~~~~~~~~~~~v~~~~~~~-------~~~~l~~~l~~~~gi~v~~g~~f~---~~~~~~iRi~~~--~~~~ 406 (421)
T 3l8a_A 342 A---KTKIKVMEPEGTYLVWLDFSAYAI-------AQPQLSEKLQNEAKVVLNDGAHFG---KEGKYFARLNVA--TPKN 406 (421)
T ss_dssp H---HCSCEEECCSBSSEEEEECGGGTC-------CTTHHHHHHHHTTCEECEEGGGGC---GGGTTEEEEECC--SCHH
T ss_pred h---CCCceEeCCCeeEEEEEeccccCC-------CHHHHHHHHHHhCCEEEECchhhC---CCCCCEEEEEec--CCHH
Confidence 7 3677776555556666877641 1 234688888765 99998765432 123689999988 5999
Q ss_pred HHHHHHHHHHHHHH
Q psy15447 436 DMNSLIETLCKSHD 449 (457)
Q Consensus 436 di~~~~~~l~~~~~ 449 (457)
++++++++|+++++
T Consensus 407 ~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 407 TVQEALSRIISVFG 420 (421)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998764
No 47
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=4.6e-35 Score=289.37 Aligned_cols=357 Identities=11% Similarity=0.000 Sum_probs=265.4
Q ss_pred eeeecCCCcEEE-ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----
Q psy15447 65 YVVDQKSGYIVN-INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG---- 139 (457)
Q Consensus 65 ~~i~~~~g~~~~-~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g---- 139 (457)
++..+++|.++| .+|+++|||..++. .+..+|++.+++.+++.+...++... ..+..+++++.+++.+|
T Consensus 11 ~~~~~~~g~~~~d~~g~~~i~~~~~~~-~~~~~~~v~~a~~~~~~~~~~~y~~~-----~~~l~~~la~~l~~~~g~~~~ 84 (391)
T 3dzz_A 11 HVPKRQGNSIKWGVLKEKELPMWIAEM-DFKIAPEIMASMEEKLKVAAFGYESV-----PAEYYKAVADWEEIEHRARPK 84 (391)
T ss_dssp SCCCCCTTBTTTTTCCTTCEECCSSCC-SSCCCHHHHHHHHHHHTTCCCCCBCC-----CHHHHHHHHHHHHHHHSCCCC
T ss_pred hhccCCCCccceeccCCCceeccccCC-CCCCCHHHHHHHHHHHhcCcCCCCCC-----CHHHHHHHHHHHHHHhCCCCC
Confidence 556688999999 59999999987753 55678999999999987632222111 46677778888888776
Q ss_pred CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHhhchhcc
Q psy15447 140 LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--------NNMQHLEELLRQQDERDT 211 (457)
Q Consensus 140 ~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~~~le~~l~~~~~~~~ 211 (457)
.+.++++++|++|+..++++++++||.|++..+.|.++...+...|.++..++. .|++++++.+++
T Consensus 85 ~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~------ 158 (391)
T 3dzz_A 85 EDWCVFASGVVPAISAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLAT------ 158 (391)
T ss_dssp GGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTS------
T ss_pred HHHEEECCCHHHHHHHHHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhc------
Confidence 446777788899999999999999999999999999999999999999988876 589999999863
Q ss_pred cCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcc
Q psy15447 212 LNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEH 288 (457)
Q Consensus 212 ~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK 288 (457)
.++++|++++++||+|.+.| +++|+++|++||+++|+||+|+.+.++.........++....+.++++.|+||
T Consensus 159 ----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK 234 (391)
T 3dzz_A 159 ----PSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSK 234 (391)
T ss_dssp ----TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHH
T ss_pred ----cCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChh
Confidence 24578888999999999954 88999999999999999999986554321111122222110122389999999
Q ss_pred cccCcc---cEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccC
Q psy15447 289 ALGSVG---GFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQ 363 (457)
Q Consensus 289 ~lg~~g---G~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~ 363 (457)
++|.+| |+++++ +++++.+........ ..+.+++.++++.++++..++ .++++++++++.+++.+.|++. ++
T Consensus 235 ~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~ 311 (391)
T 3dzz_A 235 TFNLAALHAACAIIPNPDLRARAEESFFLAG-IGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKE--VP 311 (391)
T ss_dssp HHTCTTTCCEEEECCSHHHHHHHHHHHHHHT-CSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH--CT
T ss_pred hccccchhheEEEECCHHHHHHHHHHHHhhc-cCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhh--CC
Confidence 997555 999887 888888765422111 123577777777777765322 2456788888999999998871 14
Q ss_pred CeEEeccCCCCeEEEEecCC-cchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHH
Q psy15447 364 RFLVQGHRDTPLKYLYLQKS-DDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLI 441 (457)
Q Consensus 364 ~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~ 441 (457)
++.+..+..+.+.++.+... . ...++.+.|+ ++||.+.++..+. ....+++|++++ ++++++++++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRis~~--~~~~~i~~~l 379 (391)
T 3dzz_A 312 EVKVLDSNASYLAWVDISALGM-------NAEDFCKYLREKTGLIISAGNGYR---GNGHEFVRINLA--CPKELVIDGM 379 (391)
T ss_dssp TSEECCCCBSSEEEEECGGGCS-------CHHHHHHHHHHHHCEECEESGGGC---TTGGGEEEEECC--SCHHHHHHHH
T ss_pred CcEEeccCceEEEEEehhhcCC-------CHHHHHHHHHHhCCEEEeCchhhC---CCCCCEEEEEec--CCHHHHHHHH
Confidence 77776555566666777642 2 3457889996 7899998865432 123578999988 6999999999
Q ss_pred HHHHHHHHHhc
Q psy15447 442 ETLCKSHDIAV 452 (457)
Q Consensus 442 ~~l~~~~~~~~ 452 (457)
++|++++++++
T Consensus 380 ~~l~~~l~~~~ 390 (391)
T 3dzz_A 380 QRLKQGVLNLN 390 (391)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHHHHHhh
Confidence 99999987654
No 48
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=100.00 E-value=5.2e-35 Score=289.67 Aligned_cols=339 Identities=14% Similarity=0.132 Sum_probs=256.4
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
.|+++.+++|+++|+ +|++|+||+++ +++|+ .+|++.+++.+++++++..+ +. + ..+...++++++++++
T Consensus 27 ~~~~~~~~~g~~~~d~~g~~~ld~~~~~~~~~~g~-~~~~v~~a~~~~~~~~~~~~---~~-~-~~~~~~~l~~~la~~~ 100 (395)
T 1vef_A 27 HDLLIVRGQGARVWDAEGNEYIDCVGGYGVANLGH-GNPEVVEAVKRQAETLMAMP---QT-L-PTPMRGEFYRTLTAIL 100 (395)
T ss_dssp CSSCEEEEEBTEEEETTSCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHHHCCCCC---TT-S-CCHHHHHHHHHHHHTS
T ss_pred CCccEEecccCEEEeCCCCEEEEccCccccccCCC-CCHHHHHHHHHHHHhCCCCc---cc-c-CCHHHHHHHHHHHHhc
Confidence 467889999999995 99999999876 45665 58999999999998865321 11 2 4678899999999999
Q ss_pred C--CCcEEEecccHHHHHHHHHhhc--CCCCEEE-EeCcccHHHHHHHHhcCCe------------EEEecCCCHHHHHH
Q psy15447 139 G--LEETALYSFGFSTSASAIAAYV--KRNDAVF-VDENINFAIQTGLIASRCK------------VQYFKHNNMQHLEE 201 (457)
Q Consensus 139 g--~~~~i~~~sG~~a~~~ai~a~~--~~gd~v~-~~~~~h~~~~~~~~~~g~~------------~~~~~~~d~~~le~ 201 (457)
| .+.++++++|++|+..+++++. .+++.|+ .+..+|+.....+...|.+ +..++.+|++++++
T Consensus 101 ~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~ 180 (395)
T 1vef_A 101 PPELNRVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKR 180 (395)
T ss_dssp CTTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHH
T ss_pred CCCcCEEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHH
Confidence 4 5677888999999999998763 3455555 4555666666666666654 56677789999998
Q ss_pred HHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccccCCCC
Q psy15447 202 LLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYFGVST 276 (457)
Q Consensus 202 ~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~~~~~ 276 (457)
.+++ ++++|+++|+++++|.+.| +++|+++|++||++||+||+|+ | ++..|... .+.+++.+
T Consensus 181 ~i~~-----------~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~-~-~~~~g~~~~~~~~~~~~ 247 (395)
T 1vef_A 181 AVDE-----------ETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQT-G-MGRTGKRFAFEHFGIVP 247 (395)
T ss_dssp HCCT-----------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-T-TTTTSSSSTHHHHTCCC
T ss_pred Hhcc-----------CEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-C-CccCCchhHhhhcCCCC
Confidence 8752 4578899999999999887 9999999999999999999998 3 34444432 24455544
Q ss_pred CCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447 277 EEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS 354 (457)
Q Consensus 277 ~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~ 354 (457)
|++ |+||++++ +.|++++++++++.++... ...+.+.+++.++++.++++.+++ ++..++++++++++.+
T Consensus 248 ---d~~--s~sK~~~~g~~~G~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~l~~ 319 (395)
T 1vef_A 248 ---DIL--TLAKALGGGVPLGVAVMREEVARSMPKGG--HGTTFGGNPLAMAAGVAAIRYLER-TRLWERAAELGPWFME 319 (395)
T ss_dssp ---SEE--EECGGGGTTSSCEEEEEEHHHHHTSCTTS--SCCSSTTCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHH
T ss_pred ---CEE--EEcccccCCCceEEEEehHHHHhhhccCC--cCCCcCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHH
Confidence 665 89999975 3488888888777665422 233445689999999999988765 3477899999999999
Q ss_pred HhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCC
Q psy15447 355 LLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHT 433 (457)
Q Consensus 355 ~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t 433 (457)
.|+++.. +.+... ++.++++++.+..+ ..++.+.|. ++||.+.+.. .+++|++++..+|
T Consensus 320 ~l~~~~~-~~~~~~-~~~g~~~~~~~~~~---------~~~l~~~l~~~~gi~v~~~~---------~~~iRi~~~~~~~ 379 (395)
T 1vef_A 320 KLRAIPS-PKIREV-RGMGLMVGLELKEK---------AAPYIARLEKEHRVLALQAG---------PTVIRFLPPLVIE 379 (395)
T ss_dssp HHHTSCC-TTEEEE-EEETTEEEEEESSC---------SHHHHHHHHHHHCEECEESS---------TTEEEECCCTTCC
T ss_pred HHHHhhc-CceEEE-EEEEEEEEEEEcCh---------HHHHHHHHHHHCCeEEecCC---------CCEEEEeCCCCCC
Confidence 9987321 112211 34567888887642 246888998 8999988642 4789999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy15447 434 EQDMNSLIETLCKSH 448 (457)
Q Consensus 434 ~edi~~~~~~l~~~~ 448 (457)
++|+++++++|++++
T Consensus 380 ~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 380 KEDLERVVEAVRAVL 394 (395)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998875
No 49
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=1.9e-33 Score=276.99 Aligned_cols=351 Identities=13% Similarity=0.065 Sum_probs=251.1
Q ss_pred ceeeecCCCcEEEE--CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC--
Q psy15447 64 KYVVDQKSGYIVNI--NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG-- 139 (457)
Q Consensus 64 ~~~i~~~~g~~~~~--~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-- 139 (457)
+++..+++|+++|. +|+++|||.+++ .++..+|++.+++.+++.+...++..+ ..+...++++.+++.+|
T Consensus 6 ~~~~~~~~g~~~~d~~~~~~~i~l~~~~-~~~~~~~~v~~a~~~~~~~~~~~y~~~-----~~~~~~~l~~~l~~~~g~~ 79 (383)
T 3kax_A 6 KTVNRRGTHSIKWDTYKNEELIHAWIAD-MDFEVPQPIQTALKKRIEHPIFGYTLP-----PENIGDIICNWTKKQYNWD 79 (383)
T ss_dssp -------------CCCSSSCCEECCCSS-CSSCCCHHHHHHHHHHHHSCCCCCCCC-----CTTHHHHHHHHHHHHHCCC
T ss_pred ceeeccCCCceeeeccCCCCeeeccccc-CCCCCCHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHHHHHHHHhCCC
Confidence 45667899999995 568999999876 356678999999999997632222111 46788889999998877
Q ss_pred --CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHhhchh
Q psy15447 140 --LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--------NNMQHLEELLRQQDER 209 (457)
Q Consensus 140 --~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~~~le~~l~~~~~~ 209 (457)
.+.++++++|++|+..++++++++||.|++..++|..+...++..|.++..++. .|++++++.+.
T Consensus 80 ~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~----- 154 (383)
T 3kax_A 80 IQKEWIVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQ----- 154 (383)
T ss_dssp CCGGGEEEESCHHHHHHHHHHHHCCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHT-----
T ss_pred CChhhEEEcCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhC-----
Confidence 346788888899999999999999999999999999999999999999888775 38999999883
Q ss_pred cccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC--CCccEEEe
Q psy15447 210 DTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST--EEVDMIIG 284 (457)
Q Consensus 210 ~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~--~~~Di~~~ 284 (457)
+++++|++++++||+|.+.| +++|+++|++||+++|+||+|+.+.++ |........+.+ .+.++++.
T Consensus 155 ------~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~~i~~~ 226 (383)
T 3kax_A 155 ------QGVKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYA--DHTHTPFASLSEELAARTITCM 226 (383)
T ss_dssp ------TTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCT--TCCCCCGGGSCHHHHTTEEEEE
T ss_pred ------cCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccC--CCCceeHhhcCccccCcEEEEE
Confidence 24567778889999999988 567777799999999999999865443 222222222222 13468899
Q ss_pred cCcccccCcc---cEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcc
Q psy15447 285 SLEHALGSVG---GFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQH 359 (457)
Q Consensus 285 s~sK~lg~~g---G~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~ 359 (457)
|+||++|..| |++++ ++++++.++.....+.+ .+.+++.++++.++++..++ .++++++++++.+++.+.|++.
T Consensus 227 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 305 (383)
T 3kax_A 227 APSKTFNIAGLQASIIIIPNEKLRQAFTSIQYRQGF-HGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDH 305 (383)
T ss_dssp CSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTC-CCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EChhhccCcchhheEEEeCCHHHHHHHHHHHhhccc-CCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999998555 89887 68888877654322222 24588888888887754221 2356778888999999998761
Q ss_pred cccCCeEEeccCCCCeEEEEecCC-cchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHH
Q psy15447 360 KVTQRFLVQGHRDTPLKYLYLQKS-DDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDM 437 (457)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi 437 (457)
++++.+..+..+.+.++.+... . ...++++.|+ ++||+++++..+. ....+++|++++ .+++++
T Consensus 306 --~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRi~~~--~~~~~i 371 (383)
T 3kax_A 306 --IPTLSVMKPEGSFLLWIDCSALNL-------SQDERTKLLEEKGKIIVEPGEKYG---LGGEEHIGINIG--CPRSVL 371 (383)
T ss_dssp --CTTCEECCCSBSSEEEEECGGGCC-------CHHHHHHHHHHTSCEECEESGGGC---TTCTTEEEEECS--SCHHHH
T ss_pred --CCCceEecCCceEEEEEEccccCC-------CHHHHHHHHHhhCCEEeECchhhc---CCCCCeEEEEEc--CCHHHH
Confidence 2477776555556666777642 2 3457889998 5799998865432 123589999987 489999
Q ss_pred HHHHHHHHHHH
Q psy15447 438 NSLIETLCKSH 448 (457)
Q Consensus 438 ~~~~~~l~~~~ 448 (457)
++++++|++++
T Consensus 372 ~~~l~~l~~~l 382 (383)
T 3kax_A 372 EEILNRLRHTF 382 (383)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998875
No 50
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=8.5e-34 Score=278.85 Aligned_cols=334 Identities=18% Similarity=0.182 Sum_probs=250.5
Q ss_pred CceeeecCCCcEEEE-CCeeeEEeecCCc-cCCC-CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447 63 SKYVVDQKSGYIVNI-NGIPCINFATHNY-LSFV-ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG 139 (457)
Q Consensus 63 ~~~~i~~~~g~~~~~-~G~~~id~~s~~~-l~~~-~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g 139 (457)
.|+.+++++|.++|. +|++|+||+++.+ ..++ .+|++.+++.+++++++.... .| ..+...++++++++++|
T Consensus 10 ~~~~~~~~~g~~~~~~~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~----~y-~~~~~~~l~~~la~~~g 84 (375)
T 2eh6_A 10 LPVKFVRGKGVYLYDEEGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSN----LY-ENPWQEELAHKLVKHFW 84 (375)
T ss_dssp EEEEEEEEEBTEEEETTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCT----TB-CCHHHHHHHHHHHHTSS
T ss_pred CCccEEeeecCEEEeCCCCEEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCc----cc-CCHHHHHHHHHHHhhcC
Confidence 477899999999985 9999999998754 3454 589999999999987643211 12 34567899999999999
Q ss_pred C-CcEEEecccHHHHHHHHHh---hc---CCC-CEEEEeCcc-cHHHHHHHHhcCC------------eEEEecCCCHHH
Q psy15447 140 L-EETALYSFGFSTSASAIAA---YV---KRN-DAVFVDENI-NFAIQTGLIASRC------------KVQYFKHNNMQH 198 (457)
Q Consensus 140 ~-~~~i~~~sG~~a~~~ai~a---~~---~~g-d~v~~~~~~-h~~~~~~~~~~g~------------~~~~~~~~d~~~ 198 (457)
. +.++++++|++|+..++++ +. ++| |.|++..+. |..........+. .+..++++|+++
T Consensus 85 ~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 164 (375)
T 2eh6_A 85 TEGKVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKLNDIDS 164 (375)
T ss_dssp SCEEEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECTTCHHH
T ss_pred CCCeEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCCchHHH
Confidence 8 7888899999999999865 45 677 888777665 5544444443322 166777789999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccccC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYFG 273 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~~ 273 (457)
+++.++ +++++|++++++|++|.+.| +++|+++|++||+++|+||+|+. +|..+... ...++
T Consensus 165 l~~~l~-----------~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~--~~~~~~~~~~~~~~ 231 (375)
T 2eh6_A 165 VYKLLD-----------EETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTG--IGRTGEFYAYQHFN 231 (375)
T ss_dssp HHTTCC-----------TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTT--TTTTSSSSGGGGGT
T ss_pred HHHHhc-----------CCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccC--CCCCCcchhhhhcC
Confidence 888774 24678899999999999988 99999999999999999999982 33333322 34455
Q ss_pred CCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q psy15447 274 VSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNT 351 (457)
Q Consensus 274 ~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~ 351 (457)
..+ |++ |+||++++ +.|++++++++++.++.......+ +.+++.++++.++++.++ +..+++++++++
T Consensus 232 ~~~---d~~--s~SK~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~ 301 (375)
T 2eh6_A 232 LKP---DVI--ALAKGLGGGVPIGAILAREEVAQSFTPGSHGSTF--GGNPLACRAGTVVVDEVE---KLLPHVREVGNY 301 (375)
T ss_dssp CCC---SEE--EECGGGGTTSCCEEEEEEHHHHTTCCTTSCCCSS--TTCHHHHHHHHHHHHHHH---HHHHHHHHHHHH
T ss_pred CCC---CEE--EEcccccCCCCeEEEEEcHHHHhhhcCCCCCCCC--CCCHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence 433 666 78899974 248888888877766542222233 458888888888888775 578899999999
Q ss_pred HHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCC
Q psy15447 352 MHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNIS 431 (457)
Q Consensus 352 l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~ 431 (457)
+.+.|+++ ..... ++.+.++++.++.+ ..++++.|.++||.+.+.. .+++|++++..
T Consensus 302 l~~~L~~~---~~~~~--~~~g~~~~~~~~~~---------~~~~~~~l~~~gi~~~~~~---------~~~iRi~~~~~ 358 (375)
T 2eh6_A 302 FKEKLKEL---GKGKV--KGRGLMLGLELERE---------CKDYVLKALEKGLLINCTA---------GKVLRFLPPLI 358 (375)
T ss_dssp HHHHHHHT---TSSEE--EEETTEEEEECSSC---------CHHHHHHHHHTTEECEEET---------TTEEEECCCTT
T ss_pred HHHHHHHH---hcCCc--eEEEEEEEEEEcCc---------HHHHHHHHHHCCCEEecCC---------CCEEEEECCCC
Confidence 99999872 22222 34578888887643 2368888999999987642 47899999988
Q ss_pred CCHHHHHHHHHHHHHH
Q psy15447 432 HTEQDMNSLIETLCKS 447 (457)
Q Consensus 432 ~t~edi~~~~~~l~~~ 447 (457)
+|++|+++++++|+++
T Consensus 359 ~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 359 IQKEHIDRAISVLREI 374 (375)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh
Confidence 9999999999999875
No 51
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=5.7e-34 Score=280.18 Aligned_cols=350 Identities=13% Similarity=0.123 Sum_probs=256.9
Q ss_pred eeecCCCcEEE-ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----C
Q psy15447 66 VVDQKSGYIVN-INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----L 140 (457)
Q Consensus 66 ~i~~~~g~~~~-~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~ 140 (457)
...+++|+++| .+|+++|||+++.. .+..+|++.+++.+++.+.... +.. .+ .+..+++++.+.+.+| .
T Consensus 8 ~~~~~~g~~~~d~~g~~~idl~~~~~-~~~~~~~v~~a~~~~~~~~~~~---y~~-~~-~~lr~~la~~~~~~~~~~~~~ 81 (377)
T 3fdb_A 8 EDLRARNTMKWTRYGQGVLPLWVAES-DFSTCPAVLQAITDAVQREAFG---YQP-DG-SLLSQATAEFYADRYGYQARP 81 (377)
T ss_dssp HHHHHTCCHHHHSSCTTSEECCSSCC-CSCCCHHHHHHHHHHHHTTCCS---SCC-SS-CCHHHHHHHHHHHHHCCCCCG
T ss_pred HHhcCCCCceeeccCCCeeeecccCC-CCCCCHHHHHHHHHHHHcCCCC---CCC-CC-HHHHHHHHHHHHHHhCCCCCH
Confidence 34589999999 59999999998753 5557899999999999862222 111 23 4455555555554433 4
Q ss_pred CcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC---CHHHHHHHHHhhchhcccCCCCc
Q psy15447 141 EETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN---NMQHLEELLRQQDERDTLNSKVT 217 (457)
Q Consensus 141 ~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~---d~~~le~~l~~~~~~~~~~~~~~ 217 (457)
+.++++++|++|+..++++++++||.|++..+.|..+...+...|.++..++.+ |++++++.+++ +
T Consensus 82 ~~i~~t~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~~l~~~l~~-----------~ 150 (377)
T 3fdb_A 82 EWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGGINLHDVEKGFQA-----------G 150 (377)
T ss_dssp GGEEEESCHHHHHHHHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTSCCHHHHHHHHHT-----------T
T ss_pred HHEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCCCCHHHHHHHhcc-----------C
Confidence 577888899999999999999999999999999999988999999999998876 89999999875 2
Q ss_pred cEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCC-CccccccCCCCCCccEEEecCcccccCc
Q psy15447 218 KKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTG-HGVTEYFGVSTEEVDMIIGSLEHALGSV 293 (457)
Q Consensus 218 ~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g-~~~~~~~~~~~~~~Di~~~s~sK~lg~~ 293 (457)
++++++++++||+|.+.| +++|+++|++||+++|+||+|+.+.++ | ........+...+.++++.|+||++|..
T Consensus 151 ~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 228 (377)
T 3fdb_A 151 ARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFD--GQHTVAAGVSDTAASVCITITAPSKAWNIA 228 (377)
T ss_dssp CCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSS--SCCCCGGGSCHHHHHHEEEEECSTTTTTCG
T ss_pred CCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcC--CCCCcccHHHccCCCcEEEEEeChHhccCc
Confidence 457777788999999987 667888899999999999999865443 2 1111222221123458899999999755
Q ss_pred c---cEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEe
Q psy15447 294 G---GFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQ 368 (457)
Q Consensus 294 g---G~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~ 368 (457)
| ||++. ++++++.+..... ..+.+.+++.++++.++++..++ .++++++++++.+++.+.|++. ++++.+.
T Consensus 229 G~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~ 304 (377)
T 3fdb_A 229 GLKCAQIIFSNPSDAEHWQQLSP--VIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKR--IPGAKIT 304 (377)
T ss_dssp GGCCEEEECCSHHHHHHHHHSCH--HHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH--STTCEEC
T ss_pred chhheEEEeCCHHHHHHHHHHHH--hhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhh--CCCceEe
Confidence 5 87654 7888888865432 22345688888888888875322 2456788889999999999772 2478776
Q ss_pred ccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 369 GHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 369 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
.+..+.+.++.+.... ...++++.|+++ ||++.++..+.. ...+++|++++. +++++++++++|+++
T Consensus 305 ~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~~~---~~~~~~Ris~~~--~~e~i~~~l~~l~~~ 372 (377)
T 3fdb_A 305 PMQATYLMWIDFRDTT-------IEGSPSEFFIEKAKVAMNDGAWFGE---DGTGFCRLNFAT--SREVLEEAIDRMAKA 372 (377)
T ss_dssp CCSBCSEEEEECTTSC-------CCSCHHHHHHHHHCEECEEGGGGCG---GGTTEEEEECCS--CHHHHHHHHHHHHHH
T ss_pred cCCeeEEEEEECcccC-------CCHHHHHHHHHhCCEEecCChhccC---CCCCEEEEEeCC--CHHHHHHHHHHHHHH
Confidence 5555666678776531 113567777776 999988764321 235899999884 899999999999998
Q ss_pred HHH
Q psy15447 448 HDI 450 (457)
Q Consensus 448 ~~~ 450 (457)
+++
T Consensus 373 l~~ 375 (377)
T 3fdb_A 373 VSH 375 (377)
T ss_dssp HTT
T ss_pred Hhh
Confidence 764
No 52
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=6.7e-33 Score=270.25 Aligned_cols=333 Identities=14% Similarity=0.061 Sum_probs=257.0
Q ss_pred CCcEEE-ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC--CcEEEec
Q psy15447 71 SGYIVN-INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL--EETALYS 147 (457)
Q Consensus 71 ~g~~~~-~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~~i~~~ 147 (457)
+|.+++ .+|+++|||+++.. .+..+|++.+++.+++.+.. . | ..+...++++++++++|. +.+++++
T Consensus 6 ~~~~~~~~~~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~-~-------y-~~~~~~~l~~~la~~~~~~~~~i~~~~ 75 (354)
T 3ly1_A 6 ESAAFTAPSTDNPIRINFNEN-PLGMSPKAQAAARDAVVKAN-R-------Y-AKNEILMLGNKLAAHHQVEAPSILLTA 75 (354)
T ss_dssp ---CCCCCCSSSCEECSSCCC-SSCCCHHHHHHHHHTGGGTT-S-------C-CHHHHHHHHHHHHHHTTSCGGGEEEES
T ss_pred ccccccCCCCCceEEccCCCC-CCCCCHHHHHHHHHHHhhCc-C-------C-CCCchHHHHHHHHHHhCCChHHEEEeC
Confidence 444555 48899999998753 45568999999999887521 1 1 245678999999999994 4678888
Q ss_pred ccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447 148 FGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFII 222 (457)
Q Consensus 148 sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi 222 (457)
+|++|+..++.+++++||.|++..++|..+...++..|.++..++.+ |++++++.+++. +++++|+
T Consensus 76 g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~---------~~~~~v~ 146 (354)
T 3ly1_A 76 GSSEGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAY---------SGPSIVY 146 (354)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTC---------SSCEEEE
T ss_pred ChHHHHHHHHHHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhccC---------CCCCEEE
Confidence 89999999999999999999999999999999999999999999887 899999999741 2457888
Q ss_pred EecCCCCCCCCCChHHHHHHHHH--cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEE
Q psy15447 223 VEGVYMNSADICPLKDILSLRSK--YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFC 297 (457)
Q Consensus 223 ~e~v~~~~G~i~~l~~i~~l~~~--~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v 297 (457)
+++++||+|.+.|.+++.++|+. ||+++|+||+|+.+.++..........+.. .+.+++++|+||++|..| |++
T Consensus 147 l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~ 225 (354)
T 3ly1_A 147 LVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQG-AENIILLKTFSKIHAMAGMRVGYA 225 (354)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTT-CSSEEEEEESSSTTCCGGGCCEEE
T ss_pred EeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhc-CCCEEEEeeChhhccChhhhheee
Confidence 88999999999998888888877 999999999998654433222222222111 134688999999998555 999
Q ss_pred EecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEE
Q psy15447 298 VGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKY 377 (457)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 377 (457)
++++++++.++..... .+.+++.++++.++++..+..++.+++++++.+++.+.|++ .++.+. ++.+.+++
T Consensus 226 ~~~~~~~~~~~~~~~~----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~~-~~~~~~~~ 296 (354)
T 3ly1_A 226 VAHPTVIALMGRYVAG----EKINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALED----LKLPYL-PSEGNFVF 296 (354)
T ss_dssp ECCHHHHHHHGGGTTC----SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH----HTCCBC-CCCSSEEE
T ss_pred ecCHHHHHHHHHhcCC----CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCCeEC-CCCceEEE
Confidence 9999999988765443 35688888888888764433345778888999999999988 366654 45677888
Q ss_pred EEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 378 LYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 378 i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
+.++.+ ..++.+.|.++||.+. +.++ ...+++|++++ |++|+++++++|+++++.
T Consensus 297 ~~~~~~---------~~~~~~~l~~~gi~v~-g~~~-----~~~~~iRis~~---~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 297 HQLVVP---------LKDYQTHMADAGVLIG-RAFP-----PADNWCRISLG---TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp EECSSC---------HHHHHHHHHHTTEECC-CCCT-----TCTTEEEEECC---CHHHHHHHHHHHHHHHHT
T ss_pred EECCCC---------HHHHHHHHHHCCEEEe-ecCC-----CCCCEEEEEcC---CHHHHHHHHHHHHHHHHh
Confidence 877642 3478889999999988 5442 34689999975 899999999999998764
No 53
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=1.7e-33 Score=278.14 Aligned_cols=349 Identities=12% Similarity=0.034 Sum_probs=261.1
Q ss_pred eeeecCCCcEEEE-CC-----eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447 65 YVVDQKSGYIVNI-NG-----IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138 (457)
Q Consensus 65 ~~i~~~~g~~~~~-~G-----~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 138 (457)
+...+++|+++|. +| +.++||.+++. ++..+|++.+++.+++.+...++. .+..+...++++.+++++
T Consensus 11 ~~~~~~~g~~~~d~~~~~~~~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~y~-----~~~~~~~~~l~~~l~~~~ 84 (391)
T 4dq6_A 11 IVDRSNNFSSKWSEMEKKYGTNDLLPMWVADM-DFKAAPCIIDSLKNRLEQEIYGYT-----TRPDSYNESIVNWLYRRH 84 (391)
T ss_dssp CCCCTTTTBHHHHCHHHHHSCSCSEECCSSSC-SSCCCHHHHHHHHHHHTTCCCCCB-----CCCHHHHHHHHHHHHHHH
T ss_pred ccccccCCceeeeecccccCCCCceeccccCC-CCCCCHHHHHHHHHHHhCCCCCCC-----CCCHHHHHHHHHHHHHHh
Confidence 4455789999984 54 45599998763 556689999999999976322211 135788889999999988
Q ss_pred C----CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC---------CHHHHHHHHHh
Q psy15447 139 G----LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN---------NMQHLEELLRQ 205 (457)
Q Consensus 139 g----~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~---------d~~~le~~l~~ 205 (457)
| .+.++++++|++|+..++++++++||.|++..+.|..+...+...|.++..++.+ |++++++.+++
T Consensus 85 g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 164 (391)
T 4dq6_A 85 NWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD 164 (391)
T ss_dssp CCCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT
T ss_pred CCCCcHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc
Confidence 7 4467888899999999999999999999999999999999999999999888765 78888887743
Q ss_pred hchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC--CCcc
Q psy15447 206 QDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST--EEVD 280 (457)
Q Consensus 206 ~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~--~~~D 280 (457)
+++|++++++||+|.+.| +++|+++|++||+++|+||+|+.+.++ |........+.+ .+.+
T Consensus 165 ------------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~~ 230 (391)
T 4dq6_A 165 ------------VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILK--KHKHIPMASISKEFEKNT 230 (391)
T ss_dssp ------------EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCT--TCCCCCGGGSCHHHHHTE
T ss_pred ------------CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccC--CCCccCHHHcCccccCcE
Confidence 468888889999999965 789999999999999999999865443 222222222222 1334
Q ss_pred EEEecCcccccCcc---cEEEecH-HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHH
Q psy15447 281 MIIGSLEHALGSVG---GFCVGSS-YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSL 355 (457)
Q Consensus 281 i~~~s~sK~lg~~g---G~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~ 355 (457)
+++.|+||++|.+| |++++++ ++++.+......+. ..+.+++.++++.++++..++ .++.+++++++.+++.+.
T Consensus 231 i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 309 (391)
T 4dq6_A 231 ITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRID-IKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKY 309 (391)
T ss_dssp EEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTT-CCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEechhhccCcccceEEEEeCCHHHHHHHHHHHHhhc-CCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999997554 8988775 78877765422221 224588888888888765322 235677888899999998
Q ss_pred hhcccccCCeEEeccCCCCeEEEEecC-CcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCC
Q psy15447 356 LSQHKVTQRFLVQGHRDTPLKYLYLQK-SDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHT 433 (457)
Q Consensus 356 L~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t 433 (457)
|++. ++++.+..+..+.+.++.++. .. ...++.+.|.++ ||.++++..+. ....+++|++++ ++
T Consensus 310 l~~~--~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRis~~--~~ 375 (391)
T 4dq6_A 310 INEN--MPKLKVRKPEGTYLLWVDFSALGL-------SDEELESILVQKGKVALNQGNSFG---IGGSGYQRINLA--CP 375 (391)
T ss_dssp HHHH--CTTSEECCCSBSSEEEEECGGGCC-------CHHHHHHHHHHTTCEECEEGGGGC---TTCTTEEEEECC--SC
T ss_pred HHhh--CCCCEecCCCccEEEEEEhhhcCC-------CHHHHHHHHHHhCCEEeeCchhhC---CCCCCeEEEEEc--CC
Confidence 8761 257777655556666677764 22 356789999998 99998865432 123589999988 68
Q ss_pred HHHHHHHHHHHHHHH
Q psy15447 434 EQDMNSLIETLCKSH 448 (457)
Q Consensus 434 ~edi~~~~~~l~~~~ 448 (457)
++++++++++|++++
T Consensus 376 ~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 376 RSMLEEALIRIKNAI 390 (391)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998875
No 54
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=8.2e-33 Score=272.04 Aligned_cols=332 Identities=13% Similarity=0.073 Sum_probs=246.2
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----CCC-----cEEEecc
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----GLE-----ETALYSF 148 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~~-----~~i~~~s 148 (457)
+|+++|||+++.+ .++.+|++.+++.+++++... ..|+......++++.+++++ |.+ .++++++
T Consensus 23 ~g~~~idl~~~~~-~~~~~~~v~~a~~~~~~~~~~------~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g 95 (376)
T 2dou_A 23 RGVGLIDLSIGST-DLPPPEAPLKALAEALNDPTT------YGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIG 95 (376)
T ss_dssp TTCCCEECSSCCC-CCCCCHHHHHHHHHHTTCGGG------SSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESS
T ss_pred cCCCEEeccCCCC-CCCCCHHHHHHHHHHHhCCCc------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCC
Confidence 4788999988765 555689999999998865211 12233345677888888876 753 5677777
Q ss_pred cHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447 149 GFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIV 223 (457)
Q Consensus 149 G~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~ 223 (457)
|++|+..++++++++||.|++..+.|..+...++..|.++..++. .|++++++.+.. ++++|++
T Consensus 96 ~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~-----------~~~~v~l 164 (376)
T 2dou_A 96 SQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVWR-----------EAKVLLL 164 (376)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECBCTTSSBCGGGSCHHHHH-----------HEEEEEE
T ss_pred cHHHHHHHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHhhcc-----------CceEEEE
Confidence 889999999999999999999999999998888889999888874 367888888753 3467777
Q ss_pred ecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEE
Q psy15447 224 EGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFC 297 (457)
Q Consensus 224 e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v 297 (457)
++++||+|.+.| +++|+++|++||+++|+||+|+.+.++..........+. .+.+++++|+||++|.+| ||+
T Consensus 165 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~ 242 (376)
T 2dou_A 165 NYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGA--KERVVELFSLSKSYNLAGFRLGFA 242 (376)
T ss_dssp CSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTG--GGTEEEEEEHHHHHTCGGGCCEEE
T ss_pred CCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCC--CCcEEEEecchhhcCChhheeEEE
Confidence 788999999988 678999999999999999999876543211222222221 234788999999997555 999
Q ss_pred EecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh-hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeE
Q psy15447 298 VGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLK 376 (457)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 376 (457)
++++++++.++.....+.+ +.+++.++++.++++..+ ..++.+++++++.+++.+.|++ . +.+..+..+.++
T Consensus 243 ~~~~~~~~~l~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~-~~~~~~~~~~~~ 315 (376)
T 2dou_A 243 LGSEEALARLERVKGVIDF--NQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKG----V-LSLLPPRATMYL 315 (376)
T ss_dssp EECHHHHHHHHHHHHHHCC--CSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTT----T-SEECCCCBSSEE
T ss_pred ecCHHHHHHHHHHHHhccc--CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----h-cCccCCCeeEEE
Confidence 9999999888654333333 347788888877775421 1234667888899999999988 3 555534446678
Q ss_pred EEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 377 YLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 377 ~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
++.++... ...++.+.|.++||.+.++..+.. ...+++|++++. +++++++++++|++++
T Consensus 316 ~~~~~~~~-------~~~~~~~~l~~~gi~v~~g~~f~~---~~~~~~Ris~~~--~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 316 WGRLPEGV-------DDLEFGLRLVERGVALAPGRGFGP---GGKGFVRIALVR--PLEELLEAAKRIREAL 375 (376)
T ss_dssp EEECCTTC-------CHHHHHHHHHHTTEECEEGGGGCG---GGTTEEEEECCS--CHHHHHHHHHHHHHTC
T ss_pred EEECCCCC-------CHHHHHHHHHHCCEEEcCchhhCC---CCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 88876543 345789999999999988654321 135799999974 8999999999998764
No 55
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=1.8e-32 Score=270.69 Aligned_cols=338 Identities=11% Similarity=0.097 Sum_probs=246.0
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTS 153 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~ 153 (457)
+|++++||+++.+ .++.+|.+.+++.+++++.... +....|..+...++++.+.+.+| .+.++++++|++|+
T Consensus 28 ~g~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~---y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~ 103 (388)
T 1j32_A 28 EGIDVCSFSAGEP-DFNTPKHIVEAAKAALEQGKTR---YGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSI 103 (388)
T ss_dssp TTCCCEECCCSSC-SSCCCHHHHHHHHHHHHTTCCS---CCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHH
T ss_pred cCCCEEECCCCCC-CCCCCHHHHHHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHH
Confidence 5788999998765 4556789999999998752111 22223445555555555555445 34677788889999
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV 226 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v 226 (457)
..++.+++++||.|++..+.|.++...++..|.++..++.+ |++++++.+++ ++++|+++++
T Consensus 104 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-----------~~~~v~~~~p 172 (388)
T 1j32_A 104 FNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITP-----------KTKLLVFNTP 172 (388)
T ss_dssp HHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCT-----------TEEEEEEESS
T ss_pred HHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCc-----------CceEEEEeCC
Confidence 99999999999999999999999988889999998887753 67888877742 4578888899
Q ss_pred CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC--CCccEEEecCcccccCcc---cEEE
Q psy15447 227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST--EEVDMIIGSLEHALGSVG---GFCV 298 (457)
Q Consensus 227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~--~~~Di~~~s~sK~lg~~g---G~v~ 298 (457)
+||+|.+.| +++|+++|++||+++|+||+|+.+.++. ........+.+ .+.|+++.|+||++|++| |+++
T Consensus 173 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~ 250 (388)
T 1j32_A 173 SNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDD--AQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLA 250 (388)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT--CCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEE
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC--CCCCCHHHccccccCCEEEEeechhccCCcccceEEEE
Confidence 999999977 8899999999999999999998765532 11111122221 235899999999998555 9999
Q ss_pred ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEE
Q psy15447 299 GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKY 377 (457)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 377 (457)
+++++++.+........ .+.+++.++++.++++...+ .++++++++++.+++.+.|++ .+++.+..+..+.+++
T Consensus 251 ~~~~~~~~l~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~g~~~~~~~~~~~~~ 325 (388)
T 1j32_A 251 GPVPLVKAATKIQGHST--SNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNA---MPGLECPKPDGAFYMF 325 (388)
T ss_dssp CCHHHHHHHHHHHHTTT--CSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHT---CTTCBCCCCCBTTEEC
T ss_pred eCHHHHHHHHHHHhhcc--cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhh---CCCCcccCCCeeEEEE
Confidence 99998888765432222 23477777777777753211 234677888999999999988 4577665444455555
Q ss_pred EEecC-CcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 378 LYLQK-SDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 378 i~~~~-~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+.+.. .. ...++.+.|.+ +||.+.++..+ ..++++|++++ ++++++++++++|+++++++
T Consensus 326 ~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~-----~~~~~iRis~~--~~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 326 PSIAKTGR-------SSLDFCSELLDQHQVATVPGAAF-----GADDCIRLSYA--TDLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp CBCGGGTC-------CHHHHHHHHHHHHCEECEEGGGG-----TCTTBEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCCC-------CHHHHHHHHHHhCCEEEeChhhh-----CCCCcEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 55542 12 34578888886 69999886542 22578999986 69999999999999988764
No 56
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=3.3e-32 Score=271.33 Aligned_cols=345 Identities=16% Similarity=0.178 Sum_probs=255.4
Q ss_pred ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccC--hHHHHHHHHHHHhhcCC---CcEEEecccHH
Q psy15447 77 INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGT--NVVHLDLENDIASFMGL---EETALYSFGFS 151 (457)
Q Consensus 77 ~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~--~~~~~~l~~~la~~~g~---~~~i~~~sG~~ 151 (457)
.+|+++++|.++.+ + ..++.+.+++.++++++...+......|+. .+...++++.+++++|. +.++++++|++
T Consensus 24 ~~g~~~i~l~~~~~-~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~ 101 (420)
T 1t3i_A 24 INGHPLVYLDNAAT-S-QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATE 101 (420)
T ss_dssp ETTEECEECBTTTC-C-CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHH
T ss_pred cCCCceEEecCCcc-C-CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHH
Confidence 46888999988766 3 347899999999998754222111222333 46678999999999998 67888899999
Q ss_pred HHHHHHHhh----cCCCCEEEEeCcccHHH----HHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCcc
Q psy15447 152 TSASAIAAY----VKRNDAVFVDENINFAI----QTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTK 218 (457)
Q Consensus 152 a~~~ai~a~----~~~gd~v~~~~~~h~~~----~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~ 218 (457)
|+..++.++ .++||.|++..+.|.+. .......|.++..++. .|++++++.+++ ++
T Consensus 102 a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-----------~~ 170 (420)
T 1t3i_A 102 AINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSE-----------KT 170 (420)
T ss_dssp HHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCT-----------TE
T ss_pred HHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCC-----------Cc
Confidence 999999999 89999999999988873 3445667888888775 478888887742 45
Q ss_pred EEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEE
Q psy15447 219 KFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFC 297 (457)
Q Consensus 219 ~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v 297 (457)
++|++++++|++|.+.|+++|.++|++||+++|+||+|++|.... . ...+ ++|+++.|+||.+|+.| |++
T Consensus 171 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~---~-~~~~-----~~di~~~s~sK~~~~~g~G~~ 241 (420)
T 1t3i_A 171 KLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPL---D-VQLI-----DCDWLVASGHKMCAPTGIGFL 241 (420)
T ss_dssp EEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCC---C-HHHH-----TCSEEEEEGGGTTSCTTCEEE
T ss_pred eEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccC---c-hhhc-----CCCEEEEehhhhcCCCceEEE
Confidence 788999999999999999999999999999999999998764321 1 1112 24899999999887655 899
Q ss_pred EecHHHHHHHHhhCCcc------------------eecCCCcHHHHHHHHH-HHHHHhh--CcHHHHHHHHHHHHHHHHh
Q psy15447 298 VGSSYIIEHHRLSGSGY------------------CFSASLPPFLAVAANK-ALHLLKA--NPSLLTKLREKCNTMHSLL 356 (457)
Q Consensus 298 ~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~aaa~a-~l~~~~~--~~~~~~~l~~~~~~l~~~L 356 (457)
++++++++.++....++ .+..+.+++.++++++ +++.+.+ .+++.++++++.+++.+.|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 321 (420)
T 1t3i_A 242 YGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGL 321 (420)
T ss_dssp EECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred EEchHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 99999888775432211 1222234455555444 6777654 2457888999999999999
Q ss_pred hcccccCCeEEeccC-----CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccc---cCCCCCeEEEEe
Q psy15447 357 SQHKVTQRFLVQGHR-----DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQE---AKKQKPSIRITC 428 (457)
Q Consensus 357 ~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~---~~~~~~~lRi~~ 428 (457)
++ .+++++..+. .++++.+.++. . ...++.+.|.++||.+.++.++... .....+++|+++
T Consensus 322 ~~---~~g~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~ 390 (420)
T 1t3i_A 322 GQ---IPQLRLYGPNPKHGDRAALASFNVAG-L-------HASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASL 390 (420)
T ss_dssp HT---CTTEEEESCCGGGSCBCSEEEEEETT-B-------CHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEEC
T ss_pred Hh---CCCeEEeCCCccccccCCEEEEEECC-C-------CHHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEec
Confidence 88 4588876543 37778777753 2 2456888898999999876433210 011157899999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447 429 NISHTEQDMNSLIETLCKSHDIAVQP 454 (457)
Q Consensus 429 ~~~~t~edi~~~~~~l~~~~~~~~~~ 454 (457)
+..+|++|+++++++|+++++.++..
T Consensus 391 ~~~~~~~~i~~~~~~l~~~~~~~~~~ 416 (420)
T 1t3i_A 391 YFYNTKEEIDLFLQSLQATIRFFSDD 416 (420)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHTC--
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 98899999999999999999887553
No 57
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=5.3e-32 Score=269.03 Aligned_cols=349 Identities=15% Similarity=0.150 Sum_probs=250.9
Q ss_pred CeeeEEeecCCc-cCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----C----CCcEEEeccc
Q psy15447 79 GIPCINFATHNY-LSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----G----LEETALYSFG 149 (457)
Q Consensus 79 G~~~id~~s~~~-l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g----~~~~i~~~sG 149 (457)
|+++|||+++.+ ....+++++.+++.+++++.+.. .. |+......++++.+++++ | .+.++++++|
T Consensus 33 g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~----~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~ 107 (407)
T 2zc0_A 33 GVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKS----VM-YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGG 107 (407)
T ss_dssp SCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGG----GS-CCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHH
T ss_pred CCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccc----cc-CCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCH
Confidence 678999987643 22224688999999999874311 11 222223456666666666 7 3466777788
Q ss_pred HHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC----CCHHHHHHHHHhhchhcccCCCCccEEE-EEe
Q psy15447 150 FSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH----NNMQHLEELLRQQDERDTLNSKVTKKFI-IVE 224 (457)
Q Consensus 150 ~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~----~d~~~le~~l~~~~~~~~~~~~~~~~~v-i~e 224 (457)
++|+..++++++++||.|++..++|..+...+...|.++..++. .|++++++.++..... ..++++| +++
T Consensus 108 t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~-----~~~~~~v~~~~ 182 (407)
T 2zc0_A 108 TGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDNDGMRVDLLEEKIKELKAK-----GQKVKLIYTIP 182 (407)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHT-----TCCEEEEEECC
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCCCCCHHHHHHHHHhhhcc-----cCCceEEEECC
Confidence 99999999999999999999999999998889999988887765 3899999988731100 0234565 578
Q ss_pred cCCCCCCCCCChH---HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEe
Q psy15447 225 GVYMNSADICPLK---DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVG 299 (457)
Q Consensus 225 ~v~~~~G~i~~l~---~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~ 299 (457)
+++||+|.+.|.+ +|+++|++||+++|+||+|+.+.++.........++ +.+.+++++|+||++|+ .+|++++
T Consensus 183 ~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~~~G~r~G~~~~ 260 (407)
T 2zc0_A 183 TGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALD--NEGRVIVAGTLSKVLGTGFRIGWIIA 260 (407)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGC--SSCCEEEEEESTTTTCTTSCCEEEEC
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcC--CCCCEEEEcccccccCCCcceEEEec
Confidence 8999999999965 999999999999999999987655321111122222 23346889999999983 3599999
Q ss_pred cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH----hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCe
Q psy15447 300 SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL----KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPL 375 (457)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~----~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~ 375 (457)
++++++.+......+.++ .+++.++++.++++.. +..+..+++++++.+++.+.|++. .+++.+..+..+.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~ 336 (407)
T 2zc0_A 261 EGEILKKVLMQKQPIDFC--APAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENH--LPNAEFTKPIAGMF 336 (407)
T ss_dssp CHHHHHHHHHHHTTTTSS--SCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHH--CTTSCBCCCSBSSE
T ss_pred CHHHHHHHHHHHHhhcCC--CCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCEEecCCCcEE
Confidence 999988887654444343 3777777777777643 223457788889999999999762 14555544455778
Q ss_pred EEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 376 KYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 376 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+++.++... ...++.+.|.++ ||.+.++..+... ....+++|++++.. |++|+++++++|+++++++.
T Consensus 337 ~~~~~~~~~-------~~~~l~~~l~~~~gi~v~~g~~~~~~-~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~~ 405 (407)
T 2zc0_A 337 VMFFLPEGA-------DGISFANELMEREGVVVVPGKPFYTD-ESGKNAIRLNFSRP-SKEEIPIGIKKLAKLYKEKF 405 (407)
T ss_dssp EEEECSTTC-------CHHHHHHHHHHHTCEECBCSGGGCSS-SCCTTEEEEECSSS-CTTHHHHHHHHHHHHHHHHC
T ss_pred EEEEcCCCC-------CHHHHHHHHHHhCCeEEECchhccCC-CCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHHHHh
Confidence 888886433 345789999998 9999887543210 01357899999876 89999999999999987764
No 58
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=1.3e-32 Score=272.85 Aligned_cols=355 Identities=11% Similarity=0.054 Sum_probs=253.1
Q ss_pred eeecCCCcEEEE-CCe-------eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q psy15447 66 VVDQKSGYIVNI-NGI-------PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASF 137 (457)
Q Consensus 66 ~i~~~~g~~~~~-~G~-------~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~ 137 (457)
+..+++|+++|+ +|+ +++||+++. .++..+|++.+++.+++++....+. . +..++.+++++.+.+.
T Consensus 9 ~~~~~~g~~~~d~~g~~~g~~~~~~i~l~~~~-~~~~~~~~v~~a~~~~~~~~~~~y~---~--~~~~l~~~la~~l~~~ 82 (399)
T 1c7n_A 9 ISRKNLGSLKWDLMYSQNPEVGNEVVPLSVAD-MEFKNPPELIEGLKKYLDETVLGYT---G--PTEEYKKTVKKWMKDR 82 (399)
T ss_dssp CCCTTTTBHHHHHHHHHCTTCCTTCCCCCSSS-CSSCCCHHHHHHHHHHHHHCCCSSB---C--CCHHHHHHHHHHHHHH
T ss_pred ccccCCCccccccchhhccccCCCceeeeecC-CCCCCCHHHHHHHHHHHhcCCCCCC---C--CcHHHHHHHHHHHHHH
Confidence 445799999994 764 789998765 4566689999999999975211111 1 1233334444444333
Q ss_pred cC----CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHh
Q psy15447 138 MG----LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--------NNMQHLEELLRQ 205 (457)
Q Consensus 138 ~g----~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~~~le~~l~~ 205 (457)
+| .+.++++++|++|+..++.+++++||.|++..++|..+...+...|.++..++. .|++++++.+++
T Consensus 83 ~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~ 162 (399)
T 1c7n_A 83 HQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKD 162 (399)
T ss_dssp HCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTC
T ss_pred hCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhcc
Confidence 45 346778888899999999999999999999999999988888888988887764 478999988863
Q ss_pred hchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC--CCcc
Q psy15447 206 QDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST--EEVD 280 (457)
Q Consensus 206 ~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~--~~~D 280 (457)
.++++|++++++||+|.+.| +++|+++|++||+++|+||+|+.+.++ |........+.+ .+.+
T Consensus 163 ----------~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~~ 230 (399)
T 1c7n_A 163 ----------KNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMP--GYEHTVFQSIDEQLADKT 230 (399)
T ss_dssp ----------TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCT--TCCCCCGGGSCHHHHTTE
T ss_pred ----------CCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccC--CCCcccHHHcCccccCcE
Confidence 24567778899999999999 899999999999999999999865543 221112222221 1336
Q ss_pred EEEecCcccccCcc---cEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh-hCcHHHHHHHHHHHHHHHH
Q psy15447 281 MIIGSLEHALGSVG---GFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK-ANPSLLTKLREKCNTMHSL 355 (457)
Q Consensus 281 i~~~s~sK~lg~~g---G~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~-~~~~~~~~l~~~~~~l~~~ 355 (457)
+++.|+||++|.+| |+++++ +++++.++.....+.++ +.+++.++++.++++... ..++.+++++++.+++.+.
T Consensus 231 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 309 (399)
T 1c7n_A 231 ITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDATSGM-PFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDF 309 (399)
T ss_dssp EEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCC-CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeChhhccccchheEEEEECCHHHHHHHHHHHhhcccC-CCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 88999999998555 899886 66888776543333222 358888888888876421 1234667788889999988
Q ss_pred hhcccccCCeEEeccCCCCeEEEEecCC-cchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCC
Q psy15447 356 LSQHKVTQRFLVQGHRDTPLKYLYLQKS-DDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHT 433 (457)
Q Consensus 356 L~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t 433 (457)
|++. ++++.+..+..+.++++.++.. . ...++.+.|+ ++||.+.++..+. +...+++|++++. +
T Consensus 310 L~~~--~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRis~~~--~ 375 (399)
T 1c7n_A 310 FEVN--HPEIKAPLIEGTYLQWIDFRALKM-------DHKAMEEFMIHKAQIFFDEGYIFG---DGGIGFERINLAA--P 375 (399)
T ss_dssp HHHH--CTTSBCCCCSBSSEEEEECGGGCC-------CHHHHHHHHHHTTCCCCEEGGGGC---GGGTTEEEEECCS--C
T ss_pred HHhh--CCCCeEecCCceEEEEEEcccCCC-------CHHHHHHHHHHhCCEEEeCccccC---CCCCCeEEEEecc--C
Confidence 8761 1466554334455557777641 2 2457888997 5799998865432 1235789999985 4
Q ss_pred HHHHHHHHHHHHHHHHHhcC
Q psy15447 434 EQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 434 ~edi~~~~~~l~~~~~~~~~ 453 (457)
+++++++++.|+++++++.+
T Consensus 376 ~~~l~~~l~~l~~~l~~~~~ 395 (399)
T 1c7n_A 376 SSVIQESLERLNKALKDLKN 395 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999987754
No 59
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=1.2e-31 Score=264.98 Aligned_cols=352 Identities=12% Similarity=0.032 Sum_probs=238.4
Q ss_pred eeecCCCcEEE-ECCe-----eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChH-HHHHHHHHHHhhc
Q psy15447 66 VVDQKSGYIVN-INGI-----PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNV-VHLDLENDIASFM 138 (457)
Q Consensus 66 ~i~~~~g~~~~-~~G~-----~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~-~~~~l~~~la~~~ 138 (457)
+-.+++|+++| .+|+ ++|||.++.+ +++.+|++.+++.+++.+....+. . +..+ +.+++++.+.+.+
T Consensus 8 ~~~~~~~~~~~d~~~~~~~~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~y~---~--~~~~~lr~~la~~l~~~~ 81 (390)
T 1d2f_A 8 VDRHGTWCTQWDYVADRFGTADLLPFTISDM-DFATAPCIIEALNQRLMHGVFGYS---R--WKNDEFLAAIAHWFSTQH 81 (390)
T ss_dssp ----------------------CEECCSSSC-SSCCCHHHHHHHHHHHTTCCCCCC---C--SCCHHHHHHHHHHHHHHS
T ss_pred ccccCCCccchhhhccccCCCCeeEeeecCC-CCCCCHHHHHHHHHHHhCCCCCCC---C--CChHHHHHHHHHHHHHhc
Confidence 34578999999 4886 7899987654 566789999999999865211111 1 1233 4444444444444
Q ss_pred C----CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHhh
Q psy15447 139 G----LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--------NNMQHLEELLRQQ 206 (457)
Q Consensus 139 g----~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~~~le~~l~~~ 206 (457)
| .+.++++++|++|+..++++++++||.|++..+.|..+...+...|.++..++. .|++++++.+++
T Consensus 82 g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~- 160 (390)
T 1d2f_A 82 YTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK- 160 (390)
T ss_dssp CCCCCGGGEEEESCHHHHHHHHHHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTS-
T ss_pred CCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhcc-
Confidence 5 346777788889999999999999999999999999998888889988887764 488999988853
Q ss_pred chhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEE
Q psy15447 207 DERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMII 283 (457)
Q Consensus 207 ~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~ 283 (457)
.++++|++++++||+|.+.| +++|+++|++||+++|+||+|+.+.++ |........+.++-.|. +
T Consensus 161 ---------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~d~-~ 228 (390)
T 1d2f_A 161 ---------PECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWG--EQPHIPWSNVARGDWAL-L 228 (390)
T ss_dssp ---------TTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCS--SSCCCCGGGTCCSSEEE-E
T ss_pred ---------CCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccC--CCCCcCHHHcchhhHhh-c
Confidence 24567777788999999988 789999999999999999999875543 22222233333221256 8
Q ss_pred ecCcccccCcc---cEEEec-HHHHHHHHhhCC-cceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhh
Q psy15447 284 GSLEHALGSVG---GFCVGS-SYIIEHHRLSGS-GYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLS 357 (457)
Q Consensus 284 ~s~sK~lg~~g---G~v~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~ 357 (457)
.|+||++|.+| |+++++ +++++.++.... .+.++ +.+++.++++.++++..++ .++.+++++++.+++.+.|+
T Consensus 229 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~ 307 (390)
T 1d2f_A 229 TSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLS-SPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMN 307 (390)
T ss_dssp ECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCC-SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCccHhhcccChhheEEEECCHHHHHHHHHHHhhhcccC-CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999998555 898874 788777765432 22332 3588888888888764222 23466778888899999887
Q ss_pred cccccCCeEEeccCCCCeEEEEecCC-cchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447 358 QHKVTQRFLVQGHRDTPLKYLYLQKS-DDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQ 435 (457)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e 435 (457)
+. ++++.+..+..+.++++.++.. . ...++.+.|. ++||.+.++..+. ....+++|++++. +++
T Consensus 308 ~~--~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~l~~~~gi~v~~g~~f~---~~~~~~~Ris~~~--~~~ 373 (390)
T 1d2f_A 308 AA--FPELNWQIPQSTYLAWLDLRPLNI-------DDNALQKALIEQEKVAIMPGYTYG---EEGRGFVRLNAGC--PRS 373 (390)
T ss_dssp HH--CSSCCCCCCSBCSEEEEECGGGCC-------CHHHHHHHHHHTTCEECEEGGGGC---GGGTTEEEEECCS--CHH
T ss_pred hh--CCCCEEecCCccEEEEEEccccCC-------CHHHHHHHHHHHcCEEeeCccccC---CCCCCeEEEEecC--CHH
Confidence 61 1466554334445567777642 2 2457889998 5799998875432 1235789999986 689
Q ss_pred HHHHHHHHHHHHHHHh
Q psy15447 436 DMNSLIETLCKSHDIA 451 (457)
Q Consensus 436 di~~~~~~l~~~~~~~ 451 (457)
+++++++.|++++++.
T Consensus 374 ~l~~~l~~l~~~l~~~ 389 (390)
T 1d2f_A 374 KLEKGVAGLINAIRAV 389 (390)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999988764
No 60
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=5.2e-32 Score=268.60 Aligned_cols=341 Identities=13% Similarity=0.132 Sum_probs=249.8
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCC--CcccChHHHHHHHHHHHhhcCC---CcEEEecccHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPR--GFYGTNVVHLDLENDIASFMGL---EETALYSFGFST 152 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~--~~~g~~~~~~~l~~~la~~~g~---~~~i~~~sG~~a 152 (457)
+|+.+++|..+.. + ..+|++.+++.+++++....+..+. ..+...+...++++++++++|. +.++++++|++|
T Consensus 20 ~g~~~i~l~~~~~-~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a 97 (406)
T 1kmj_A 20 NGLPLAYLDSAAS-A-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEG 97 (406)
T ss_dssp TTEECEECCTTTC-C-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHH
T ss_pred CCCceEEecCCcc-C-CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHH
Confidence 5677777766544 3 2478999999999987532221111 1123467788999999999997 466777888899
Q ss_pred HHHHHHhh----cCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccE
Q psy15447 153 SASAIAAY----VKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKK 219 (457)
Q Consensus 153 ~~~ai~a~----~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~ 219 (457)
+..++.++ +++||.|++..+.|.+... .+...|.++..++.+ |++++++.+++ +++
T Consensus 98 ~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~-----------~~~ 166 (406)
T 1kmj_A 98 INLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDE-----------KTR 166 (406)
T ss_dssp HHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCT-----------TEE
T ss_pred HHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhcc-----------CCe
Confidence 99999998 8999999999998765432 345668888887753 67888887742 457
Q ss_pred EEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEE
Q psy15447 220 FIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCV 298 (457)
Q Consensus 220 ~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~ 298 (457)
+|++++++|++|.+.|+++|+++|++||+++|+||+|+.|... ... ..+ ++|+++.|++|.+|+.| |+++
T Consensus 167 ~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~---~~~-~~~-----~~d~~~~s~~K~~g~~G~G~~~ 237 (406)
T 1kmj_A 167 LLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHP---VDV-QAL-----DCDFYVFSGHKLYGPTGIGILY 237 (406)
T ss_dssp EEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSC---CCH-HHH-----TCSEEEEEGGGTTSCTTCEEEE
T ss_pred EEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCC---Ccc-ccc-----CCCEEEEEchhccCCCCcEEEE
Confidence 8999999999999999999999999999999999999875431 111 111 34899999999998777 9999
Q ss_pred ecHHHHHHHHhhCCcc-------------------eecCCCcHHHHHHHH-HHHHHHhh--CcHHHHHHHHHHHHHHHHh
Q psy15447 299 GSSYIIEHHRLSGSGY-------------------CFSASLPPFLAVAAN-KALHLLKA--NPSLLTKLREKCNTMHSLL 356 (457)
Q Consensus 299 ~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~aaa~-a~l~~~~~--~~~~~~~l~~~~~~l~~~L 356 (457)
+++++++.++....+. .+..+.+++.+++++ ++++.+++ .+.+.++++++.+++.+.|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 317 (406)
T 1kmj_A 238 VKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQL 317 (406)
T ss_dssp ECHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred EeHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 9999888765332111 122223444445444 77777653 2457788899999999999
Q ss_pred hcccccCCeEEeccC-CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccc---cCCCCCeEEEEecCCC
Q psy15447 357 SQHKVTQRFLVQGHR-DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQE---AKKQKPSIRITCNISH 432 (457)
Q Consensus 357 ~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~---~~~~~~~lRi~~~~~~ 432 (457)
++ .+++++..+. .+.++.+.++.. ...++.+.|.++||.++++.++... ....++++|++++..+
T Consensus 318 ~~---~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~ 386 (406)
T 1kmj_A 318 ES---VPDLTLYGPQNRLGVIAFNLGKH--------HAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYN 386 (406)
T ss_dssp TT---STTEEEESCTTCCSEEEEEETTC--------CHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTC
T ss_pred hc---CCCeEEecCCCcCCEEEEEECCC--------CHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecCC
Confidence 88 4588876542 577777776532 2356888899999999876532110 0112579999999999
Q ss_pred CHHHHHHHHHHHHHHHHHh
Q psy15447 433 TEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 433 t~edi~~~~~~l~~~~~~~ 451 (457)
|++|+++++++|+++++.+
T Consensus 387 t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 387 THEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998765
No 61
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=4.8e-32 Score=265.93 Aligned_cols=329 Identities=15% Similarity=0.133 Sum_probs=243.8
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----C----CCcEEEeccc
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----G----LEETALYSFG 149 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g----~~~~i~~~sG 149 (457)
+|++++||.++.+ +++.+|.+.+++.+++++.... +....|. .++++.+++++ | .+.++++++|
T Consensus 27 ~g~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~---y~~~~~~----~~l~~~la~~~~~~~g~~~~~~~v~~~~g~ 98 (370)
T 2z61_A 27 EGKKVIHLEIGEP-DFNTPKPIVDEGIKSLKEGKTH---YTDSRGI----LELREKISELYKDKYKADIIPDNIIITGGS 98 (370)
T ss_dssp TTCCCEECCCCSC-SSCCCHHHHHHHHHHHHTTCCS---CCCTTCC----HHHHHHHHHHHHHHSSCCCCGGGEEEESSH
T ss_pred cCCCEEEccCCCC-CCCCCHHHHHHHHHHHHcCccC---CCCCCCC----HHHHHHHHHHHHHHhCCCCChhhEEECCCh
Confidence 3678999988765 4555789999999998762111 1111233 44555555554 2 3567888899
Q ss_pred HHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447 150 FSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN 229 (457)
Q Consensus 150 ~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~ 229 (457)
++|+..++++++++||.|++..+.|..+...++..|.++..++ .|++++++.+++ ++++|++++++||
T Consensus 99 ~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~-~d~~~l~~~l~~-----------~~~~v~~~~p~np 166 (370)
T 2z61_A 99 SLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD-FTVESLEEALSD-----------KTKAIIINSPSNP 166 (370)
T ss_dssp HHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC-SSHHHHHHHCCS-----------SEEEEEEESSCTT
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC-CCHHHHHHhccc-----------CceEEEEcCCCCC
Confidence 9999999999999999999999999999999999999999888 899999887743 3567788899999
Q ss_pred CCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHH
Q psy15447 230 SADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEH 306 (457)
Q Consensus 230 ~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~ 306 (457)
+|.+.|++ |+++|++||+++|+||+|+.+.++.....+....+ ..+.|++++|+||++|.+| |++++++++++.
T Consensus 167 tG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 243 (370)
T 2z61_A 167 LGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDE--NLEKTILINGFSKLYAMTGWRIGYVISNDEIIEA 243 (370)
T ss_dssp TCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCT--TCSSEEEEEESTTTTTCGGGCCEEEECCHHHHHH
T ss_pred cCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccC--CCCcEEEEecChhccCCccceEEEEEECHHHHHH
Confidence 99999999 99999999999999999987655321111222111 1345899999999998555 999999999888
Q ss_pred HHhhCCcceecCCCcHHHHHHHHHHHHH-Hh-hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCc
Q psy15447 307 HRLSGSGYCFSASLPPFLAVAANKALHL-LK-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD 384 (457)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~~-~~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 384 (457)
++.....+ +.+.+++.++++.++++. .+ ..++.+++++++.+++.+.|++ .|+.+..+..+.++++.++. .
T Consensus 244 ~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~-~ 316 (370)
T 2z61_A 244 ILKLQQNL--FISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKD----FGWEVNNPIGAYYVFPNIGE-D 316 (370)
T ss_dssp HHHHHHHH--TSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTCBCCCCCBTTEECCBCSS-C
T ss_pred HHHHHhhc--ccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHH----cCCeecCCCcceEEEEecCC-C
Confidence 86543322 234588888888777764 22 2245678888999999999988 36666544445666666653 1
Q ss_pred chHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 385 DEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 385 ~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
..++.++|. ++||.+.++..+.. ...+++|++++ ++++++++++++|+++++
T Consensus 317 --------~~~~~~~l~~~~gi~v~~g~~f~~---~~~~~~Ri~~~--~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 317 --------GREFAYKLLKEKFVALTPGIGFGS---KGKNYIRISYA--NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp --------HHHHHHHHHHHHCEECEEGGGGCG---GGSSBEEEECC--SCHHHHHHHHHHHHHHHC
T ss_pred --------HHHHHHHHHHhCCEEEeCchhhCC---CCCCEEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 346888887 78999988654321 13578999998 699999999999998764
No 62
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=1.2e-31 Score=268.34 Aligned_cols=342 Identities=12% Similarity=0.074 Sum_probs=251.4
Q ss_pred CCeeeEEeecCCcc---CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC-------CCcEEEec
Q psy15447 78 NGIPCINFATHNYL---SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG-------LEETALYS 147 (457)
Q Consensus 78 ~G~~~id~~s~~~l---~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-------~~~~i~~~ 147 (457)
+|+++|||+.+.+. .+..+|.+++++.+++.+.... .|+......++++.++++++ .+.+++++
T Consensus 52 ~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~------~y~~~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~ 125 (427)
T 3dyd_A 52 PNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYN------GYAPSIGFLSSREEIASYYHCPEAPLEAKDVILTS 125 (427)
T ss_dssp TTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSS------SCCCTTCCHHHHHHHHHHHCBTTBCCCGGGEEEES
T ss_pred CCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCC------CCCCCCCcHHHHHHHHHHHhhcCCCCChHHEEEec
Confidence 57899999988754 2456799999999999873221 12223334678888888876 45678888
Q ss_pred ccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEE
Q psy15447 148 FGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKF 220 (457)
Q Consensus 148 sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~ 220 (457)
+|++|+..++.+++++||.|++..+.|..+...+...|.++..++.. |++++++.+++ ++++
T Consensus 126 g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-----------~~~~ 194 (427)
T 3dyd_A 126 GCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDE-----------KTAC 194 (427)
T ss_dssp SHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCT-----------TEEE
T ss_pred CcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhcc-----------CCCE
Confidence 99999999999999999999999999999888899999988877653 67777776642 3567
Q ss_pred EEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---
Q psy15447 221 IIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG--- 294 (457)
Q Consensus 221 vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g--- 294 (457)
|++++++||+|.+.| +++|+++|++||+++|+||+|+.+.++ |........+..+...++++|+||.+|..|
T Consensus 195 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~--g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~ri 272 (427)
T 3dyd_A 195 LIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFS--DCKYEPLATLSTDVPILSCGGLAKRWLVPGWRL 272 (427)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCS--SCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCC
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccC--CCcCccHHHhCCCCcEEEEeeccccCCCcCcce
Confidence 788888999999999 999999999999999999999865443 222222222222222477899999987665
Q ss_pred cEEEec-------HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH--hhCcHHHHHHHHHHHHHHHHhhcccccCCe
Q psy15447 295 GFCVGS-------SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL--KANPSLLTKLREKCNTMHSLLSQHKVTQRF 365 (457)
Q Consensus 295 G~v~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~--~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~ 365 (457)
|+++++ +++++.+...... ..+.+++.++++.++++.. +...+.+++++++.+++.+.|++ ++++
T Consensus 273 G~~~~~~~~~~~~~~i~~~l~~~~~~---~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~g~ 346 (427)
T 3dyd_A 273 GWILIHDRRDIFGNEIRDGLVKLSQR---ILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAA---IPGL 346 (427)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHH---HCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHH---STTE
T ss_pred EEEEecCcchhhHHHHHHHHHHHHhc---cCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhc---CCCc
Confidence 898876 4677666543211 2345888888888887742 11245678888999999999988 4688
Q ss_pred EEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447 366 LVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL 444 (457)
Q Consensus 366 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l 444 (457)
.+..+..+.++++.+....-. ......+++++|+ ++||++.++..+ ..++++||++. ++++++++++++|
T Consensus 347 ~~~~p~~g~~~~~~l~~~~~~--~~~~~~~~~~~l~~~~gV~v~~g~~~-----~~~~~iRis~~--~~~e~i~~~l~~l 417 (427)
T 3dyd_A 347 RPVRPSGAMYLMVGIEMEHFP--EFENDVEFTERLVAEQSVHCLPATCF-----EYPNFIRVVIT--VPEVMMLEACSRI 417 (427)
T ss_dssp EEECCSBTTEEEEEECGGGCT--TCSSHHHHHHHHHHHHCEECEEGGGG-----TCTTEEEEESC--SCHHHHHHHHHHH
T ss_pred eecCCCeeEEEEEecCHhhcC--CCCCHHHHHHHHHHHCCEEEECCccc-----CCCCeEEEEEC--CCHHHHHHHHHHH
Confidence 876566678888777521000 0003456888886 789999887653 33689999976 7999999999999
Q ss_pred HHHHHHhcC
Q psy15447 445 CKSHDIAVQ 453 (457)
Q Consensus 445 ~~~~~~~~~ 453 (457)
++++++..+
T Consensus 418 ~~~l~~~~~ 426 (427)
T 3dyd_A 418 QEFCEQHYH 426 (427)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHhhc
Confidence 999987754
No 63
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=1.4e-31 Score=262.00 Aligned_cols=320 Identities=10% Similarity=0.073 Sum_probs=248.4
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC--CcEEEecccHHHHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL--EETALYSFGFSTSASA 156 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~a 156 (457)
++++|||+++.+ .++.+|++.+++.+++..+.. + ..+...++++++++++|. +.++++++|++++..+
T Consensus 31 ~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~----y-----~~~~~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~ 100 (363)
T 3ffh_A 31 LTKITKLSSNEN-PLGTSKKVAAIQANSSVETEI----Y-----PDGWASSLRKEVADFYQLEEEELIFTAGVDELIELL 100 (363)
T ss_dssp CSCCEECSSCSC-TTCCCHHHHHHHHTCBSCCCB----C---------CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHH
T ss_pred CCceEEccCCCC-CCCCCHHHHHHHHHHHHHhhc----C-----CCcchHHHHHHHHHHhCCChhhEEEeCCHHHHHHHH
Confidence 468999998754 445679999998887653211 1 123457899999999985 4678888899999999
Q ss_pred HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447 157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA 231 (457)
Q Consensus 157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G 231 (457)
+++++++||.|++..+.|..+...+...|.++..++.+ |++++++.+.+ ++++|++++++|++|
T Consensus 101 ~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----------~~~~v~~~~p~nptG 169 (363)
T 3ffh_A 101 TRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLNAIDE-----------KTTIVWICNPNNPTG 169 (363)
T ss_dssp HHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCTTSCCCHHHHHHHCCT-----------TEEEEEEESSCTTTC
T ss_pred HHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCCCCCcCHHHHHHhccc-----------CCCEEEEeCCCCCcC
Confidence 99999999999999999999999999999999998877 89999888742 467888899999999
Q ss_pred CCCChHHHHHHHHHc--CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHH
Q psy15447 232 DICPLKDILSLRSKY--QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEH 306 (457)
Q Consensus 232 ~i~~l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~ 306 (457)
.+.|++++.++|+.+ |+++|+||+|+.+..+. ........+. .+.+++++|+||.+|..| |++++++++++.
T Consensus 170 ~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~--~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~ 246 (363)
T 3ffh_A 170 NYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQ-PEKHEKLVRT--YKNLIITRTFSKIYGLASARVGYGIADKEIIRQ 246 (363)
T ss_dssp CCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSC-CCCCGGGGGT--CTTEEEEEESSSTTCCSSCCCEEEEECHHHHHH
T ss_pred CCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCcc-ccCHHHHhhc--CCCEEEEeechhhhcCchhceeeeecCHHHHHH
Confidence 999999999999888 99999999998554421 1122222222 233588999999998655 999999999998
Q ss_pred HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch
Q psy15447 307 HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE 386 (457)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 386 (457)
++..... .+.+++.++++.++++..+..++.+++++++.+++.+.|++ ..++.+. ++.+.++++.++.+
T Consensus 247 l~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~---~~g~~~~-~~~~~~~~~~~~~~--- 315 (363)
T 3ffh_A 247 LNIVRPP----FNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKR---FEKVKLY-PANGNFVLIDLGIE--- 315 (363)
T ss_dssp HHHTCCS----CCCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH---CTTCEEC-CCCSSEEEEECSSC---
T ss_pred HHHhCCC----CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhh---CCCceEC-CCCCeEEEEECCCC---
Confidence 8765432 34688888888888864332345678888899999999987 4677775 55677888877642
Q ss_pred HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 387 VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 387 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
..++.+.|.++||.++++..+ ..++++|++++ |++|+++++++|+++
T Consensus 316 ------~~~~~~~l~~~gi~v~~g~~~-----~~~~~iRis~~---~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 316 ------AGTIFSYLEKNGYITRSGAAL-----GFPTAVRITIG---KEEDNSAVIALLEKL 362 (363)
T ss_dssp ------HHHHHHHHHHTTEECEETTTT-----TCTTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHCCeEEEeCccC-----CCCCeEEEECC---CHHHHHHHHHHHHHh
Confidence 357889999999999887643 23689999986 999999999999875
No 64
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=6.5e-32 Score=271.65 Aligned_cols=349 Identities=15% Similarity=0.132 Sum_probs=249.6
Q ss_pred CeeeEEeecCCc-cCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----CC---CcEEEecccH
Q psy15447 79 GIPCINFATHNY-LSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----GL---EETALYSFGF 150 (457)
Q Consensus 79 G~~~id~~s~~~-l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~~i~~~sG~ 150 (457)
+.++|||+++.+ ..+.+++++.+++.+++++.+..... |+......+|++.+++++ |. +.++++++|+
T Consensus 75 ~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~----Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~ 150 (448)
T 3aow_A 75 TSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQ----YGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQ 150 (448)
T ss_dssp TSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHS----CCCTTCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHH
T ss_pred CCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhC----CCCCCCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHH
Confidence 457899988654 22235688999999998763210001 112222355666666655 75 4667777888
Q ss_pred HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC----CCHHHHHHHHHhhchhcccCCCCccEEE-EEec
Q psy15447 151 STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH----NNMQHLEELLRQQDERDTLNSKVTKKFI-IVEG 225 (457)
Q Consensus 151 ~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~----~d~~~le~~l~~~~~~~~~~~~~~~~~v-i~e~ 225 (457)
+|+..++++++++||.|++..+.|..+...++..|.+++.++. .|+++|++.++..... ..++++| ++++
T Consensus 151 ~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g~d~~~L~~~l~~~~~~-----~~~~k~v~~~~~ 225 (448)
T 3aow_A 151 QALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQ-----GKKVKVVYTVPT 225 (448)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECHHHHHHHHHHHHHT-----TCCEEEEEECCS
T ss_pred HHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCCCCCHHHHHHHHhhhhcc-----CCCCeEEEECCC
Confidence 9999999999999999999999999999999999998887765 3899999998721000 0245665 5678
Q ss_pred CCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEe
Q psy15447 226 VYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVG 299 (457)
Q Consensus 226 v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~ 299 (457)
++||+|.+.| +++|+++|++||+++|+||+|+.+.++. ........+++.+.+++++||||++| +| ||+++
T Consensus 226 ~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g--~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~ 302 (448)
T 3aow_A 226 FQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSG--NPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVG 302 (448)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSS--CCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEE
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCC--CCCcCHHhcCCCCCEEEEccchhhcc-ccccEEEEEe
Confidence 8999999988 5699999999999999999998766532 22212222333455789999999998 55 99999
Q ss_pred cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH---hhCcHHHHHHHHHHHHHHHHhhcccccC-CeEEeccCCCCe
Q psy15447 300 SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL---KANPSLLTKLREKCNTMHSLLSQHKVTQ-RFLVQGHRDTPL 375 (457)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~---~~~~~~~~~l~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~ 375 (457)
++++++.+......+.+ +.+++.++++.++|+.. +..++++++++++.+++.+.|++. .+ ++.+..+..+.+
T Consensus 303 ~~~l~~~l~~~~~~~~~--~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~g~~~~~p~~g~~ 378 (448)
T 3aow_A 303 DPGIIRKMEIAKQSTDL--CTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEF--MPEGVKWTKPEGGMF 378 (448)
T ss_dssp CHHHHHHHHHHHHHHHS--SCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCTTCEECCCSBSSE
T ss_pred CHHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCeEEeCCCccEE
Confidence 99999888654333333 34777777777777532 112345677778889999988762 13 677765556788
Q ss_pred EEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 376 KYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 376 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+++.++... ...++++.|.++||.+.++..+... ....+++|++++. .+++++++++++|++++++..
T Consensus 379 ~~v~~~~~~-------~~~~l~~~l~~~gV~v~pg~~f~~~-~~~~~~iRls~~~-~~~e~i~~~~~~L~~~l~~~~ 446 (448)
T 3aow_A 379 IWVTLPDGI-------DSKKMLERAIKKGVAYVPGEAFYAH-RDVKNTMRLNFTY-VDEDKIMEGIKRLAETIKEEL 446 (448)
T ss_dssp EEEECSTTC-------CHHHHHHHHHHTTEECEEGGGGSTT-CCCCSEEEEECSS-SCTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCC-------CHHHHHHHHHHCCcEEEcchhhcCC-CCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHHHHH
Confidence 888886543 3457899999999999887543210 1235799999986 489999999999999987654
No 65
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=3.8e-32 Score=265.74 Aligned_cols=325 Identities=13% Similarity=0.077 Sum_probs=246.5
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC--CCcEEEecccHHHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG--LEETALYSFGFSTSAS 155 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--~~~~i~~~sG~~a~~~ 155 (457)
+|+.+|||+++.+ .+..+|++.+++.+++.+.+....++. .+...++++++++++| .+.++++++|++|+..
T Consensus 24 ~~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~~~~y~-----~~~~~~lr~~la~~~g~~~~~i~~t~g~~~al~~ 97 (360)
T 3hdo_A 24 DIASWIKLNTNEN-PYPPSPEVVKAILEELGPDGAALRIYP-----SASSQKLREVAGELYGFDPSWIIMANGSDEVLNN 97 (360)
T ss_dssp CCTTSEECSSCCC-SSCCCHHHHHHHHHHHTTTCGGGGSCC-----CSSCHHHHHHHHHHHTCCGGGEEEESSHHHHHHH
T ss_pred cccceeeccCCCC-CCCCCHHHHHHHHHHHhcccchhhcCC-----CCchHHHHHHHHHHhCcCcceEEEcCCHHHHHHH
Confidence 5788999998765 556789999999999876321111111 1123689999999998 4578888999999999
Q ss_pred HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC
Q psy15447 156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP 235 (457)
Q Consensus 156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~ 235 (457)
++.+++++||.|++..++|..+...+...|.++..++.++...++++++. .+.+++++++++||+|.+.|
T Consensus 98 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~l~~~----------~~~~~v~i~~p~nptG~~~~ 167 (360)
T 3hdo_A 98 LIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGDFRIAGFPER----------YEGKVFFLTTPNAPLGPSFP 167 (360)
T ss_dssp HHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCTTSSBTTCCSS----------BCSSEEEEESSCTTTCCCCC
T ss_pred HHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCCCCCHHHHHhh----------cCCCEEEEeCCCCCCCCCcC
Confidence 99999999999999999999999999999999998887542222211111 12348888999999999999
Q ss_pred hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCC
Q psy15447 236 LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGS 312 (457)
Q Consensus 236 l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~ 312 (457)
++++.++|+++|+++|+||+|+.. .+. +.....+. .+.+++++|+||++|.+| ||+++++++++.+.....
T Consensus 168 ~~~l~~l~~~~~~~li~De~~~~~-~~~---~~~~~~~~--~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~ 241 (360)
T 3hdo_A 168 LEYIDELARRCAGMLVLDETYAEF-AES---NALELVRR--HENVVVTRTLSKSYSLAGMRIGLAIARPEVIAALDKIRD 241 (360)
T ss_dssp HHHHHHHHHHBSSEEEEECTTGGG-SSC---CCTHHHHH--CSSEEEEEESTTTTSCTTSCCEEEECCHHHHHHHHHHSC
T ss_pred HHHHHHHHHHCCCEEEEECChHhh-CCc---chhHHhcc--CCCEEEEecchHhhcCCccceeeEeeCHHHHHHHHHhCC
Confidence 999999999999999999999753 222 22111111 233688999999997655 999999999998876553
Q ss_pred cceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHH
Q psy15447 313 GYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKL 392 (457)
Q Consensus 313 ~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 392 (457)
. .+.+++.++++.++++..+..++.+++++++.+++.+.|++ .++.+. ++.+.++++.+... .
T Consensus 242 ~----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~-~~~~~~~~~~~~~~--------~ 304 (360)
T 3hdo_A 242 H----YNLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRS----IGYDVI-PSQGNYLFATPPDR--------D 304 (360)
T ss_dssp S----CCSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH----TTCEEC-CCSSSEEEEECTTC--------C
T ss_pred C----CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCCEEc-CCCccEEEEECCCC--------C
Confidence 3 24688888888888875332345778889999999999988 377765 56677888776643 3
Q ss_pred HHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 393 LQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 393 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
..++.+.|.++||.+++... +...+++|++++ |++|+++++++|+++.+
T Consensus 305 ~~~l~~~l~~~gi~v~~~~~-----~~~~~~iRis~~---~~~e~~~l~~al~~~~~ 353 (360)
T 3hdo_A 305 GKRVYDGLYARKVLVRHFSD-----PLLAHGMRISIG---TREEMEQTLAALKEIGE 353 (360)
T ss_dssp HHHHHHHHHHTTEECBCCCS-----TTTTTSEEEECC---CHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCEEEEECCC-----CCCCCEEEEEcC---CHHHHHHHHHHHHHHhc
Confidence 45788999999999987653 233589999986 89999999999998764
No 66
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=1.4e-31 Score=264.31 Aligned_cols=338 Identities=12% Similarity=0.136 Sum_probs=245.7
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCc-EEEecccHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEE-TALYSFGFSTSA 154 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~-~i~~~sG~~a~~ 154 (457)
++++||+++.. .++.+|++.+++.+++++.... +....|..+...++++.+.+.+| .+. ++++++|++|+.
T Consensus 26 ~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~---y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~ 101 (389)
T 1gd9_A 26 KDVISLGIGEP-DFDTPQHIKEYAKEALDKGLTH---YGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFL 101 (389)
T ss_dssp SSCEECCCCSC-SSCCCHHHHHHHHHHHHTTCCS---CCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHH
T ss_pred cCeEecCCCCC-CCCCCHHHHHHHHHHHhCCCCC---CCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHH
Confidence 36889987654 4456799999999999763211 11122344444444444444336 356 888889999999
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY 227 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~ 227 (457)
.++.+++++||.|++..+.|.++...++..|.++..++.+ |++++++.+++ ++++|++++++
T Consensus 102 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-----------~~~~v~~~~~~ 170 (389)
T 1gd9_A 102 MGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTD-----------KTRALIINSPC 170 (389)
T ss_dssp HHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCT-----------TEEEEEEESSC
T ss_pred HHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCc-----------CceEEEEECCC
Confidence 9999999999999999999998888888889888877632 67888877742 34677888999
Q ss_pred CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCC-CCccccccCCCCCCccEEEecCcccccCcc---cEEEec
Q psy15447 228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGST-GHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGS 300 (457)
Q Consensus 228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~-g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~ 300 (457)
||+|.+.| +++|+++|++||+++|+||+|+.+.++.. ...+....+. .+.|++++|+||++|.+| |+++++
T Consensus 171 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~ 248 (389)
T 1gd9_A 171 NPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGM--FERTITVNGFSKTFAMTGWRLGFVAAP 248 (389)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTC--GGGEEEEEESTTTTTCGGGCCEEEECC
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCC--CCCEEEEecChhhcCCcccceEEEEEC
Confidence 99999986 88999999999999999999987665321 1222222121 346899999999998665 999999
Q ss_pred HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh---CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEE
Q psy15447 301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA---NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKY 377 (457)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~---~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 377 (457)
+++++.+......+.+ +.+++.++++.++++.... .++++++++++.+++.+.|++ .|+++..+..+.+++
T Consensus 249 ~~~~~~l~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~ 322 (389)
T 1gd9_A 249 SWIIERMVKFQMYNAT--CPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNE----MGLPTVKPKGAFYIF 322 (389)
T ss_dssp HHHHHHHHHHHTTTTC--SCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTCCCCCCCBTTEEC
T ss_pred HHHHHHHHHHHhhhcc--CCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHH----cCCeecCCCeeeEEE
Confidence 9998888754433333 3477777777777764332 245677888999999999988 366665444455666
Q ss_pred EEecC-CcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 378 LYLQK-SDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 378 i~~~~-~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+.++. .. ...++.+.|. ++||.+.++..+.. ...+++|++++. +++++++++++|++++++.+
T Consensus 323 ~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~~~---~~~~~iRi~~~~--~~~~i~~~l~~l~~~~~~~~ 387 (389)
T 1gd9_A 323 PRIRDTGL-------TSKKFSELMLKEARVAVVPGSAFGK---AGEGYVRISYAT--AYEKLEEAMDRMERVLKERK 387 (389)
T ss_dssp CBCGGGTC-------CHHHHHHHHHHHTCEECEEGGGGCG---GGTTBEEEECCS--CHHHHHHHHHHHHHHHHHTT
T ss_pred EeccCCCC-------CHHHHHHHHHHhCCEEEeCchhhCC---CCCCeEEEEecC--CHHHHHHHHHHHHHHHHhcc
Confidence 66653 22 3457889998 88999988754321 235789999874 89999999999999887643
No 67
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=1.1e-31 Score=265.33 Aligned_cols=331 Identities=13% Similarity=0.123 Sum_probs=241.0
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGFSTS 153 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~ 153 (457)
.|++++||.++.+ .++.+|.+.+++.+++++.... +....|..++..++++.+.+..|. +.++++++|++|+
T Consensus 39 ~g~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~---y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al 114 (389)
T 1o4s_A 39 KGEDVINLTAGEP-DFPTPEPVVEEAVRFLQKGEVK---YTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQAL 114 (389)
T ss_dssp TTCCCEECCCSSC-SSCCCHHHHHHHHHHHTTCCCC---CCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHH
T ss_pred cCCCEEEccCCCC-CCCCCHHHHHHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHH
Confidence 4788999988765 4445789999999998763221 111123333444444444333353 4678888899999
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV 226 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v 226 (457)
..++.+++++||.|++..+.|..+...++..|.++..++.+ |++++++.+++ ++++|+++++
T Consensus 115 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-----------~~~~v~~~~p 183 (389)
T 1o4s_A 115 FNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVG-----------KTKAVLINSP 183 (389)
T ss_dssp HHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCT-----------TEEEEEEESS
T ss_pred HHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc-----------CceEEEEcCC
Confidence 99999999999999999999999888889999998887753 67777776642 4567888999
Q ss_pred CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEec
Q psy15447 227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGS 300 (457)
Q Consensus 227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~ 300 (457)
+||+|.+.| +++|+++|++||+++|+||+|+.+.++.....+....+. .+.|++++|+||++|.+| |+++++
T Consensus 184 ~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~l~~~ 261 (389)
T 1o4s_A 184 NNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEG--FDRIVYINGFSKSHSMTGWRVGYLISS 261 (389)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSS--STTEEEEEESTTTTTCGGGCCEEEECC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCC--CCcEEEEeechhhcCCcccceEEEEeC
Confidence 999999988 899999999999999999999876553211122222111 245899999999998555 999999
Q ss_pred HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447 301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL 380 (457)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~ 380 (457)
+++++.+......+. .+.+++.++++.++++.. .++++++++++.+++.+.|++ .|+++..+..+.++++.+
T Consensus 262 ~~~~~~l~~~~~~~~--~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~ 333 (389)
T 1o4s_A 262 EKVATAVSKIQSHTT--SCINTVAQYAALKALEVD--NSYMVQTFKERKNFVVERLKK----MGVKFVEPEGAFYLFFKV 333 (389)
T ss_dssp HHHHHHHHHHHHHHT--CSCCHHHHHHHHHHTTCC--CHHHHHHHHHHHHHHHHHHHH----TTCCCCCCSBSSEEEEEC
T ss_pred HHHHHHHHHHhhhcc--cCCCHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHh----cCCeeecCCcceEEEEeC
Confidence 998888765432222 234777777776665432 456788999999999999988 366665444456677776
Q ss_pred cCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 381 QKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
+ . ...++.+.|+ ++||.+.++..+ ..++++|++++. +++++++++++|+++++
T Consensus 334 ~--~-------~~~~l~~~l~~~~gi~v~~g~~f-----~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 334 R--G-------DDVKFCERLLEEKKVALVPGSAF-----LKPGFVRLSFAT--SIERLTEALDRIEDFLN 387 (389)
T ss_dssp S--S-------CHHHHHHHHHHHHCEECEEGGGG-----TCTTEEEEECCS--CHHHHHHHHHHHHHHHT
T ss_pred C--C-------CHHHHHHHHHHHCCEEEeCchhc-----CCCCeEEEEEeC--CHHHHHHHHHHHHHHHh
Confidence 5 2 3457888887 789999877542 224699999983 99999999999988764
No 68
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=1.3e-31 Score=264.76 Aligned_cols=335 Identities=12% Similarity=0.052 Sum_probs=240.5
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTS 153 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~ 153 (457)
+|+++|||+++.. .+..+|++.+++.+++.+.... +....|..++.+++++.+.+.+| .+.++++++|++|+
T Consensus 29 ~g~~~i~l~~g~~-~~~~~~~v~~a~~~~~~~~~~~---y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al 104 (391)
T 3h14_A 29 AGRRIIHMEVGQP-GTGAPRGAVEALAKSLETDALG---YTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGF 104 (391)
T ss_dssp TTCCCEECCCSSC-SSCSCHHHHHHHHHHHC-------------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHH
T ss_pred cCCCeEEccCCCC-CCCCCHHHHHHHHHHHhcCCCC---CCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHH
Confidence 6899999998753 4555789999999988752211 11122344444445555444433 35678888999999
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV 226 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v 226 (457)
..++.+++++||.|++..++|..+...+...|.++..++.+ |++++++. ++++|+++++
T Consensus 105 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~--------------~~~~v~i~~p 170 (391)
T 3h14_A 105 LLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL--------------DLAGLMVASP 170 (391)
T ss_dssp HHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS--------------CCSEEEEESS
T ss_pred HHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc--------------CCeEEEECCC
Confidence 99999999999999999999999999999999999888764 56665543 2357788899
Q ss_pred CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEec
Q psy15447 227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGS 300 (457)
Q Consensus 227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~ 300 (457)
+||+|.+.| +++|+++|++||+++|+||+|+.+.++........ . .+.+++++|+||++|..| ||++++
T Consensus 171 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~---~--~~~~i~~~s~sK~~g~~G~r~G~~~~~ 245 (391)
T 3h14_A 171 ANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALE---L--TDECYVINSFSKYFSMTGWRVGWMVVP 245 (391)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGG---T--CSSSEEEEESSSTTCCTTSCCEEEECC
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhh---c--CCCEEEEEechhccCCccceeEEEEeC
Confidence 999999998 88999999999999999999986555432222222 2 233688999999998555 999999
Q ss_pred HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEE-eccCCCCeEEEE
Q psy15447 301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLV-QGHRDTPLKYLY 379 (457)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~i~ 379 (457)
+++++.+......+ +.+.+++.++++.++++..+..++.+++++++.+++.+.|++ .++.. ..+..+.++++.
T Consensus 246 ~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~~~~~~~~~~~~~~ 319 (391)
T 3h14_A 246 EDQVRVVERIAQNM--FICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPK----AGFTRIAPPDGAFYVYAD 319 (391)
T ss_dssp GGGHHHHHHHHHHT--TCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH----HTCCCBCCCCBTTEEEEE
T ss_pred HHHHHHHHHHHhhh--ccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH----cCCCcccCCCeeEEEEEe
Confidence 99988876543322 334578887777777762222245677888899999999987 23332 223445677777
Q ss_pred ecC-CcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 380 LQK-SDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 380 ~~~-~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+.. .. ...++++.|+++ ||.+.++..+.. ....+++|++++. +++++++++++|++++++..
T Consensus 320 ~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~~~--~~~~~~iRis~~~--~~~~i~~~l~~l~~~~~~~~ 383 (391)
T 3h14_A 320 VSDLTD-------DSRAFAAEILEKAGVAVTPGLDFDP--ERGAGTLRFSYAR--ATADIEEGLDRLEAFMQARG 383 (391)
T ss_dssp CTTTCS-------CHHHHHHHHHHHHCEECEEGGGTCT--TTGGGEEEEECCS--CHHHHHHHHHHHHHHHHHC-
T ss_pred cCccCC-------CHHHHHHHHHHHCCEEEcCchhhCC--CCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHhc
Confidence 764 22 345788888876 999988765422 1235799999986 89999999999999987654
No 69
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=2.7e-31 Score=265.85 Aligned_cols=347 Identities=13% Similarity=0.088 Sum_probs=245.0
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CC-cEEEecccHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LE-ETALYSFGFSTSA 154 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~-~~i~~~sG~~a~~ 154 (457)
.++|||.++.+ +++.+|.+.+++.+++++.......+....|..++.+++++.+.+.+| .+ .++++++|++|+.
T Consensus 37 ~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~ 115 (429)
T 1yiz_A 37 YKPLNLGQGFP-DYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALY 115 (429)
T ss_dssp HCCEECCSSSC-SSCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH
T ss_pred CCEEEecCCCC-CCCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHH
Confidence 46899988755 555689999999999976321111121123344555555555554446 34 6788888899999
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC---------------CCHHHHHHHHHhhchhcccCCCCccE
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH---------------NNMQHLEELLRQQDERDTLNSKVTKK 219 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~---------------~d~~~le~~l~~~~~~~~~~~~~~~~ 219 (457)
.++++++++||.|++..+.|..+...++..|.++..++. .|++++++.++ ++++
T Consensus 116 ~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-----------~~~~ 184 (429)
T 1yiz_A 116 ATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFN-----------EKTK 184 (429)
T ss_dssp HHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCC-----------TTEE
T ss_pred HHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhc-----------cCce
Confidence 999999999999999999988888888888988877653 46788887774 2457
Q ss_pred EEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCC-CCCccEEEecCcccccCcc-
Q psy15447 220 FIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVS-TEEVDMIIGSLEHALGSVG- 294 (457)
Q Consensus 220 ~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~-~~~~Di~~~s~sK~lg~~g- 294 (457)
+|++++++||+|.+.| +++|+++|++||+++|+||+|+.+.++. .+......+. ..+.|+++.|+||++|++|
T Consensus 185 ~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~ 262 (429)
T 1yiz_A 185 MIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEP--FEHIRICTLPGMWERTITIGSAGKTFSLTGW 262 (429)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT--SCCCCGGGSTTTGGGEEEEEEHHHHHTCGGG
T ss_pred EEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCC--CCCcChhhccCCcCceEEEecchhccCCCCc
Confidence 8888899999999987 8899999999999999999998655432 2211112221 1356899999999998655
Q ss_pred --cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH-----H--hh-CcHHHHHHHHHHHHHHHHhhcccccCC
Q psy15447 295 --GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHL-----L--KA-NPSLLTKLREKCNTMHSLLSQHKVTQR 364 (457)
Q Consensus 295 --G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~-----~--~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~ 364 (457)
|++++++++++.+........+ +.+++.++++.++++. . ++ .++.+++++++.+++.+.|++ .|
T Consensus 263 r~G~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g 336 (429)
T 1yiz_A 263 KIGWAYGPEALLKNLQMVHQNCVY--TCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAE----VG 336 (429)
T ss_dssp CCEEEESCHHHHHHHHHHHHTTTC--CCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHH----HT
T ss_pred ceEEEEeCHHHHHHHHHHHhhccc--CCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHh----CC
Confidence 9999999998887654322223 3477888888888876 2 11 134667788889999999988 47
Q ss_pred eEEeccCCCCeEEEEecCCcch-----HHHHHHHHHHHHHHH-HcCeeEeccccCcccc--CCCCCeEEEEecCCCCHHH
Q psy15447 365 FLVQGHRDTPLKYLYLQKSDDE-----VASKKLLQTICDMCI-QAGFAITCPSHLDQEA--KKQKPSIRITCNISHTEQD 436 (457)
Q Consensus 365 ~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~--~~~~~~lRi~~~~~~t~ed 436 (457)
+.+..+..+.++++.+...... ........+++++|. ++||.+.++..+.... ....+++||+++ .++++
T Consensus 337 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~--~~~e~ 414 (429)
T 1yiz_A 337 MNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFF--KKDEN 414 (429)
T ss_dssp CEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECC--SCHHH
T ss_pred CcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEec--CCHHH
Confidence 7776555577888887653000 000003457888887 6899998764321100 012579999998 48999
Q ss_pred HHHHHHHHHHHH
Q psy15447 437 MNSLIETLCKSH 448 (457)
Q Consensus 437 i~~~~~~l~~~~ 448 (457)
|++++++|++++
T Consensus 415 i~~~l~~l~~~l 426 (429)
T 1yiz_A 415 LQKAAEILRKWK 426 (429)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhc
Confidence 999999998865
No 70
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.5e-31 Score=266.75 Aligned_cols=335 Identities=11% Similarity=-0.001 Sum_probs=249.8
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC--------CCcEEEeccc
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG--------LEETALYSFG 149 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~~~i~~~sG 149 (457)
+|+++|||+++.+ .+..+|++.+++.+++.+... .++....|. .++++.++++++ .+.++++++|
T Consensus 42 ~g~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~----~~lr~~la~~~~~~~g~~~~~~~i~~t~g~ 114 (437)
T 3g0t_A 42 TGTKFCRMEMGVP-GLPAPQIGIETEIQKLREGVA--SIYPNLDGL----PELKQEASRFAKLFVNIDIPARACVPTVGS 114 (437)
T ss_dssp HTCCCEECCCCSC-CSCCCHHHHHHHHHHHHHTGG--GSCCCTTCC----HHHHHHHHHHHHHHHCCCCCGGGEEEESHH
T ss_pred cCCCEEeccCcCC-CCCCCHHHHHHHHHHHhCCcC--cCCCCCCCh----HHHHHHHHHHHHHhhCCCCCcccEEEeCCH
Confidence 5789999998765 556789999999999985210 111111223 455556666554 4567888889
Q ss_pred HHHHHHHHHhhc--CCCC--EEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccE
Q psy15447 150 FSTSASAIAAYV--KRND--AVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKK 219 (457)
Q Consensus 150 ~~a~~~ai~a~~--~~gd--~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~ 219 (457)
++++..++.+++ ++|| .|++..+.|..+...+...|.++..++.+ |++++++.++. .+++
T Consensus 115 t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~----------~~~~ 184 (437)
T 3g0t_A 115 MQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQT----------GQFC 184 (437)
T ss_dssp HHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTT----------TCCC
T ss_pred HHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHhc----------CCce
Confidence 999999999998 9999 99999999999999988889888888753 68888888843 2456
Q ss_pred EEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-------ccccCCCCCCccEEEecCccc
Q psy15447 220 FIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-------TEYFGVSTEEVDMIIGSLEHA 289 (457)
Q Consensus 220 ~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-------~~~~~~~~~~~Di~~~s~sK~ 289 (457)
+|++++++||+|.+.| +++|+++|++||+++|+||+|+.+.++. .... ....+. .+.+++++|+||+
T Consensus 185 ~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~ 261 (437)
T 3g0t_A 185 SIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRK-DYSHPGEPLYQPSVANY--TDNYILALSSSKA 261 (437)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTS-CCCSTTSSCCCCCGGGT--CSCEEEEEESTTT
T ss_pred EEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCC-CcCcccccchhhccCCC--CCcEEEEEcCccC
Confidence 7777777999999998 6788999999999999999998766542 1111 111111 2446899999999
Q ss_pred ccCcc---cEEEecHHHHH-H-----------------HHhhCCcceecCCCcHHHHHHHHHHHHHHhh----CcHHHHH
Q psy15447 290 LGSVG---GFCVGSSYIIE-H-----------------HRLSGSGYCFSASLPPFLAVAANKALHLLKA----NPSLLTK 344 (457)
Q Consensus 290 lg~~g---G~v~~~~~~~~-~-----------------~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~----~~~~~~~ 344 (457)
+|..| ||+++++++++ . +..... ..+.+.+++.++++.++++.... .++++++
T Consensus 262 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 339 (437)
T 3g0t_A 262 FSYAGQRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALY--ALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIE 339 (437)
T ss_dssp TSCGGGCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHH--HHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHH
T ss_pred CCCccceeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHh--hhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHH
Confidence 98555 99999998887 6 432221 12334588888888888877653 3467889
Q ss_pred HHHHHHHHHHHhhcccccCCeEEe------cc-CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc
Q psy15447 345 LREKCNTMHSLLSQHKVTQRFLVQ------GH-RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA 417 (457)
Q Consensus 345 l~~~~~~l~~~L~~~~~~~~~~~~------~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~ 417 (457)
++++.+++.+.|++ .|+.+. .+ ..+.++++.+. .. ...++.+.|.++||.+.+...+..
T Consensus 340 ~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~l~~~L~~~gi~v~~~~~~~~-- 405 (437)
T 3g0t_A 340 YGRKARIMKKMFLD----NGFNIVYDKDGNEPLADGFYFTVGYK-GM-------DSSKLIEKFVRYGMCAITLKTTGS-- 405 (437)
T ss_dssp HHHHHHHHHHHHHT----TTEEESSCEETTEECCSSSEEEEEET-TC-------CHHHHHHHHHHTTEECEESTTTTC--
T ss_pred HHHHHHHHHHHHHH----cCCEEeccccCCCCCceeEEEEEecC-CC-------CHHHHHHHHHHcCeEEeeccccCC--
Confidence 99999999999998 488776 34 66788888887 32 456799999999999988764321
Q ss_pred CCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 418 KKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 418 ~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
...+.+|++++. .|++|+++++++|++++++
T Consensus 406 -~~~~~iRis~~~-~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 406 -KRNEAMRICTSL-LPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp -CCTTCEEEECSS-SCGGGHHHHHHHHHHHHHH
T ss_pred -CCCCEEEEEEec-CCHHHHHHHHHHHHHHHhc
Confidence 123789999984 4999999999999988754
No 71
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=9.5e-32 Score=264.89 Aligned_cols=330 Identities=17% Similarity=0.132 Sum_probs=245.4
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIA 158 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~ 158 (457)
.++||+++.+ .++.+|.+.+++.+++++ ... |+......++++.++++++.+ .++++++|++|+..++.
T Consensus 26 ~~i~l~~~~~-~~~~~~~v~~a~~~~~~~-~~~-------y~~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~ 96 (381)
T 1v2d_A 26 GAVNLGQGFP-SNPPPPFLLEAVRRALGR-QDQ-------YAPPAGLPALREALAEEFAVEPESVVVTSGATEALYVLLQ 96 (381)
T ss_dssp TCEECCCCSC-SSCCCHHHHHHHHHHTTT-SCS-------CCCTTCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHH
T ss_pred CeEEecCCCC-CCCCCHHHHHHHHHHHHH-hcC-------CCCCCCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHH
Confidence 4789988654 555689999999999875 211 122223578999999999864 67888889999999999
Q ss_pred hhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC--------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447 159 AYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN--------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS 230 (457)
Q Consensus 159 a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~--------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~ 230 (457)
++.++||.|++..+.|..+...++..|.++..++.+ |++++++.++ +++++|++++++|++
T Consensus 97 ~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~-----------~~~~~v~~~~~~npt 165 (381)
T 1v2d_A 97 SLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALT-----------PRTRALLLNTPMNPT 165 (381)
T ss_dssp HHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCC-----------TTEEEEEEESSCTTT
T ss_pred HhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcC-----------cCCEEEEECCCCCCC
Confidence 999999999999999988888888899888877653 6888877663 245788888999999
Q ss_pred CCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHH
Q psy15447 231 ADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYII 304 (457)
Q Consensus 231 G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~ 304 (457)
|.+.| +++|+++|++||+++|+||+|+.+.+|..+..+... ..+.|+++.|+||++|.+| |+++++++++
T Consensus 166 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~----~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~ 241 (381)
T 1v2d_A 166 GLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREF----APERTFTVGSAGKRLEATGYRVGWIVGPKEFM 241 (381)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHH----CTTTEEEEEEHHHHTTCGGGCCEEEECCTTTH
T ss_pred CCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHh----cCCCEEEEeechhhcCCcccceEEEEeCHHHH
Confidence 99987 889999999999999999999876555433333322 1345899999999997554 9999999888
Q ss_pred HHHHhhCCcceecCCCcHHHHHHHHHHHHHH--hh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEec
Q psy15447 305 EHHRLSGSGYCFSASLPPFLAVAANKALHLL--KA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ 381 (457)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~--~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~ 381 (457)
+.++...... +.+.+++.++++.++++.. ++ .++++++++++.+++.+.|++ .|+.+..+..+.++++.++
T Consensus 242 ~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~ 315 (381)
T 1v2d_A 242 PRLAGMRQWT--SFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRA----MGLRVYVPEGTYFLMAELP 315 (381)
T ss_dssp HHHHHHHHHH--TSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH----TTCCEECCSBSSEEEEECT
T ss_pred HHHHHHHhhc--ccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHH----CCCEecCCCcceEEEEecC
Confidence 8776433212 2234777777888888755 22 245778889999999999988 5777765545677777765
Q ss_pred CCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447 382 KSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQP 454 (457)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~ 454 (457)
.. ++.+.|.++||.+.++..+... +...+++|++++. +++++++++++|++++++.+++
T Consensus 316 ~~-----------~~~~~l~~~gi~v~~g~~~~~~-~~~~~~iRi~~~~--~~~~i~~~~~~l~~~l~~~r~~ 374 (381)
T 1v2d_A 316 GW-----------DAFRLVEEARVALIPASAFYLE-DPPKDLFRFAFCK--TEEELHLALERLGRVVNSPREA 374 (381)
T ss_dssp TC-----------CHHHHHHHTCEECEEGGGGCSS-SCCTTEEEEECCS--CHHHHHHHHHHHHHHC------
T ss_pred hH-----------hHHHHHHhCCEEEecchHhCCC-CCCCCEEEEEeCC--CHHHHHHHHHHHHHHHhhcccc
Confidence 32 1556677889999876543210 1235799999986 9999999999999998877654
No 72
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=3.2e-31 Score=263.41 Aligned_cols=339 Identities=11% Similarity=0.056 Sum_probs=244.7
Q ss_pred CCeeeEEeecCCcc--CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHH
Q psy15447 78 NGIPCINFATHNYL--SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFS 151 (457)
Q Consensus 78 ~G~~~id~~s~~~l--~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~ 151 (457)
+|++++||.++.+. .+..+|++.+++.+++.+.... +....|..+...++++.+.+..| .+.++++++|++
T Consensus 36 ~g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~---y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~ 112 (406)
T 1xi9_A 36 KGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNY---YGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTE 112 (406)
T ss_dssp TTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCS---CCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHH
T ss_pred cCCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCCCC---CCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHH
Confidence 67899999987663 4556789999999998763211 11112333444444444444333 346788888999
Q ss_pred HHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEe
Q psy15447 152 TSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVE 224 (457)
Q Consensus 152 a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e 224 (457)
|+..++.+++++||.|++..+.|.++...++..|.++..++.+ |++++++.+++ ++++|+++
T Consensus 113 al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-----------~~~~v~i~ 181 (406)
T 1xi9_A 113 ALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITD-----------RTKAIAVI 181 (406)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCT-----------TEEEEEEE
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCc-----------CceEEEEE
Confidence 9999999999999999999999999998889999888776642 78888887743 35677888
Q ss_pred cCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc-cEEEecCcccccCcc---cEE
Q psy15447 225 GVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV-DMIIGSLEHALGSVG---GFC 297 (457)
Q Consensus 225 ~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~-Di~~~s~sK~lg~~g---G~v 297 (457)
+++|++|.+.| +++|+++|++||+++|+||+|+.+.++.... ....++ + +. |++++|+||++|++| |++
T Consensus 182 ~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~-~~~~~~--~-~~~~i~~~s~sK~~~~~G~r~G~~ 257 (406)
T 1xi9_A 182 NPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHI-SPGSLT--K-DVPVIVMNGLSKVYFATGWRLGYM 257 (406)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCC-CHHHHC--S-SSCEEEEEESTTTTCCGGGCCEEE
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCC-CHHHcC--C-CceEEEEeccccccCCCccEEEEE
Confidence 99999999987 8999999999999999999998765532111 112222 2 34 789999999997554 888
Q ss_pred E--ecH----HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEecc
Q psy15447 298 V--GSS----YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH 370 (457)
Q Consensus 298 ~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~ 370 (457)
+ +++ ++++.+....... .+.+++.++++.++++...+ .++++++++++.+++.+.|++ .+++.+..+
T Consensus 258 ~~~~~~~~~~~l~~~l~~~~~~~---~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~ 331 (406)
T 1xi9_A 258 YFVDPENKLSEVREAIDRLARIR---LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNE---IPGISTTKP 331 (406)
T ss_dssp EEECTTCTTHHHHHHHHHHHHHT---CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHT---STTEECCCC
T ss_pred EEecCchhHHHHHHHHHHHHHhh---cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHh---CCCCeeecC
Confidence 8 888 8888876433211 23467777777777753211 234677888899999999988 457877544
Q ss_pred CCCCeEEEEecC--CcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 371 RDTPLKYLYLQK--SDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 371 ~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
..+.++++.++. .. ...++.+.|+ ++||.+.++..+.. ...+++||+++ ++++++++++++|+++
T Consensus 332 ~~~~~~~~~~~~~~~~-------~~~~l~~~l~~~~gi~v~~g~~f~~---~~~~~lRis~~--~~~~~i~~~~~~l~~~ 399 (406)
T 1xi9_A 332 QGAFYIFPKIEVGPWK-------NDKEFVLDVLHNAHVLFVHGSGFGE---YGAGHFRAVFL--PPIEILEEAMDRFEKF 399 (406)
T ss_dssp CBSSEECCEECSCSCS-------SHHHHHHHHHHHHCEECEEGGGGCG---GGTTBEEEECC--SCHHHHHHHHHHHHHH
T ss_pred CeeEEEEEecCccCCC-------CHHHHHHHHHHhCCEEEeCchhcCC---CCCCEEEEEec--CCHHHHHHHHHHHHHH
Confidence 445556666653 22 3457888887 88999987754311 12578999997 8999999999999999
Q ss_pred HHHhc
Q psy15447 448 HDIAV 452 (457)
Q Consensus 448 ~~~~~ 452 (457)
++++.
T Consensus 400 l~~~~ 404 (406)
T 1xi9_A 400 MKERL 404 (406)
T ss_dssp HHHC-
T ss_pred HHHHh
Confidence 87653
No 73
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.5e-31 Score=264.53 Aligned_cols=339 Identities=12% Similarity=0.044 Sum_probs=242.6
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTS 153 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~ 153 (457)
+|++++||.++.+ +++.+|.+.+++ +++++.... +....|..++..++++.+.+..| .+.++++++|++|+
T Consensus 41 ~g~~~i~l~~~~~-~~~~~~~v~~a~-~~l~~~~~~---y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~ 115 (409)
T 2gb3_A 41 RGVRIHHLNIGQP-DLKTPEVFFERI-YENKPEVVY---YSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAI 115 (409)
T ss_dssp TTCEEEECSSCCC-CSCCCTHHHHHH-HHTCCSSCC---CCCTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHH
T ss_pred cCCCEEeccCCCC-CCCCCHHHHHHH-HHHhcCCCC---CCCCCCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHH
Confidence 5788999998766 555678999999 888642111 11112333444444444433333 25778888999999
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCC------HHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNN------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVY 227 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~ 227 (457)
..++.+++++||.|++..+.|.++...++..|.++..++.++ +++|++.++ +++++|++++++
T Consensus 116 ~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~l~-----------~~~~~v~~~~p~ 184 (409)
T 2gb3_A 116 LFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFIN-----------ERTKGIVLSNPC 184 (409)
T ss_dssp HHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCCCTTGGGGCC-----------TTEEEEEEESSC
T ss_pred HHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCccHHHHHHhhC-----------cCCeEEEECCCC
Confidence 999999999999999999999999888999999998887653 445554442 245788888999
Q ss_pred CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecH
Q psy15447 228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSS 301 (457)
Q Consensus 228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~ 301 (457)
|++|.+.| +++|+++|++||+++|+||+|+.+.++...... ..++ .+.|++++|+||++|.+| |++++++
T Consensus 185 nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~--~~~~--~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 260 (409)
T 2gb3_A 185 NPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASA--LSIE--SDKVVVIDSVSKKFSACGARVGCLITRN 260 (409)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCG--GGSC--CTTEEEEEESTTTTTCGGGCCEEEECSC
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCc--cccC--CCCEEEEecchhccCCccceEEEEEECc
Confidence 99999876 789999999999999999999876553211121 1222 245899999999998555 9999988
Q ss_pred -HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh-hCcHHHHHHHHHHHHHHHHhhcccccCCeEE-eccCCCCeEEE
Q psy15447 302 -YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLV-QGHRDTPLKYL 378 (457)
Q Consensus 302 -~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~i 378 (457)
++++.++.....+. +.+++.++++.++++... ..++++++++++.+++.+.|++ .|+.+ ..+..+.++++
T Consensus 261 ~~l~~~l~~~~~~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~ 333 (409)
T 2gb3_A 261 EELISHAMKLAQGRL---APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEE----HGLKRFTKPSGAFYITA 333 (409)
T ss_dssp HHHHHHHHHHHHHSC---CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHH----TTCCCBCCCSBSSEEEE
T ss_pred HHHHHHHHHHHhccC---CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH----cCceeeeCCCeeEEEEE
Confidence 88888765432222 457888887777774311 1234677888899999999988 36666 43444666777
Q ss_pred EecCCcchHHHHHHHHHHHHHHHHc------CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 379 YLQKSDDEVASKKLLQTICDMCIQA------GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~l~~~------Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
.+.. . ...++.+.|.++ ||.+.++..+........+++|++++ ++++++++++++|+++++++.
T Consensus 334 ~~~~-~-------~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~ 403 (409)
T 2gb3_A 334 ELPV-E-------DAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV--LEKDLLSRAIDVLMEGLKMFC 403 (409)
T ss_dssp ECSS-S-------CHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC--SCHHHHHHHHHHHHHHHHHHH
T ss_pred EeCC-C-------CHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHHHhh
Confidence 7652 2 345788999987 99998765321100123579999988 799999999999999998775
Q ss_pred C
Q psy15447 453 Q 453 (457)
Q Consensus 453 ~ 453 (457)
+
T Consensus 404 ~ 404 (409)
T 2gb3_A 404 S 404 (409)
T ss_dssp C
T ss_pred h
Confidence 4
No 74
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=7.3e-31 Score=258.65 Aligned_cols=315 Identities=13% Similarity=0.133 Sum_probs=241.7
Q ss_pred ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--c-EEEecccHHHHHHHHHhhcCCCCEEEEeCc
Q psy15447 96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--E-TALYSFGFSTSASAIAAYVKRNDAVFVDEN 172 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~-~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~ 172 (457)
+|++.+++.+++.. ++ ++ ...+...++++.+++++|.+ . ++++++|++|+..++.+++++||.|++..+
T Consensus 32 ~~~v~~a~~~~~~~---~~-~~----~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~ 103 (386)
T 2dr1_A 32 FPEVLEIMKVQMFS---HR-SK----EYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTII 103 (386)
T ss_dssp CHHHHHHTTSCCCC---TT-SH----HHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEES
T ss_pred cHHHHHHHhccccc---cc-CH----HHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcC
Confidence 56777766555431 11 01 12678899999999999976 4 567788899999999999999999999999
Q ss_pred ccHH--HHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHH
Q psy15447 173 INFA--IQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSK 245 (457)
Q Consensus 173 ~h~~--~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~ 245 (457)
.|.+ +...+...|.+++.++. .|++++++.+++. +++++|++++++|++|.+.|+++|.++|++
T Consensus 104 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~---------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~ 174 (386)
T 2dr1_A 104 GAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKN---------PDVEAVTITYNETSTGVLNPLPELAKVAKE 174 (386)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHC---------TTCCEEEEESEETTTTEECCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcC---------CCCcEEEEEeecCCcchhCCHHHHHHHHHH
Confidence 9887 67777888998888875 5899999998641 245788888999999999999999999999
Q ss_pred cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc-c-cEEEecHHHHHHHHhh-------------
Q psy15447 246 YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV-G-GFCVGSSYIIEHHRLS------------- 310 (457)
Q Consensus 246 ~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~-g-G~v~~~~~~~~~~~~~------------- 310 (457)
||+++|+||+|++|... .++...++|+++.|+||+++++ | |++++++++++.+...
T Consensus 175 ~~~~li~D~a~~~~~~~---------~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (386)
T 2dr1_A 175 HDKLVFVDAVSAMGGAD---------IKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPERGWYFDIPLYV 245 (386)
T ss_dssp TTCEEEEECTTTBTTBC---------CCTTTTTCSEEEEETTSTTCCCSSCEEEEECHHHHHHHTTCTTCCSTTCHHHHH
T ss_pred cCCeEEEEccccccCcc---------ccccccCCcEEEEeccccccCCCceEEEEECHHHHHHHhcCCCCceEEeHHHHH
Confidence 99999999999876542 1121224589999999999754 4 8999999888766310
Q ss_pred --CC-cceecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC---CCCeEEEEec
Q psy15447 311 --GS-GYCFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR---DTPLKYLYLQ 381 (457)
Q Consensus 311 --~~-~~~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~---~~~~~~i~~~ 381 (457)
.. ......+.++..++++.++++.+.+. ++++++++++++++.+.|++ .|+++..+. .+.++++.++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~~~ 321 (386)
T 2dr1_A 246 KYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVRE----IGLDILAEPGHESPTITAVLTP 321 (386)
T ss_dssp HHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCCBSSCTTCBCSSEEEEECC
T ss_pred HhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH----cCCeeCcCccccCCceEEEEcC
Confidence 00 01123356888888888888877543 46788999999999999998 366665332 3677888876
Q ss_pred CCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 382 KSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
... ...++.+.|.++||.+.++..+ ...+++|++++..+|++|+++++++|+++++++.
T Consensus 322 ~~~-------~~~~~~~~l~~~gi~v~~~~~~-----~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 380 (386)
T 2dr1_A 322 PGI-------KGDEVYEAMRKRGFELAKGYGS-----VKEKTFRIGHMGYMKFEDIQEMLDNLREVINELK 380 (386)
T ss_dssp TTC-------CHHHHHHHHHHTTEECEECCGG-----GTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCC-------CHHHHHHHHHHCCeEEecCccc-----cCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 433 3567899999999999876532 2357999999988999999999999999988764
No 75
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2e-31 Score=266.58 Aligned_cols=353 Identities=13% Similarity=0.094 Sum_probs=248.9
Q ss_pred CeeeEEeecCCc--cCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----CC-----CcEEEec
Q psy15447 79 GIPCINFATHNY--LSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----GL-----EETALYS 147 (457)
Q Consensus 79 G~~~id~~s~~~--l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~-----~~~i~~~ 147 (457)
++++|||+++.+ .++ +++++.+++.+++++.+.....+....|. .++++.+++++ |. +.+++++
T Consensus 42 ~~~~idl~~g~~~~~~~-~~~~v~~a~~~~~~~~~~~~~~y~~~~g~----~~lr~~la~~l~~~~g~~~~~~~~v~~t~ 116 (425)
T 1vp4_A 42 DKDAISFGGGVPDPETF-PRKELAEIAKEIIEKEYHYTLQYSTTEGD----PVLKQQILKLLERMYGITGLDEDNLIFTV 116 (425)
T ss_dssp STTCEECCCCSCCGGGS-CHHHHHHHHHHHHHHSHHHHTSCCCTTCC----HHHHHHHHHHHHHHHCCCSCCGGGEEEEE
T ss_pred CCCceeCCCCCCCcccC-CHHHHHHHHHHHHhhcchhhcCCCCCCCC----HHHHHHHHHHHHhccCCCCCCcccEEEec
Confidence 467899987642 222 46889999999997632100111111233 45555555555 73 3567777
Q ss_pred ccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC----CCHHHHHHHHHhhchhcccCCCCccEEE-E
Q psy15447 148 FGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH----NNMQHLEELLRQQDERDTLNSKVTKKFI-I 222 (457)
Q Consensus 148 sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~----~d~~~le~~l~~~~~~~~~~~~~~~~~v-i 222 (457)
+|++|+..++.+++++||.|++..+.|..+...+...|.++..++. .|++++++.+++...+ ....++++| +
T Consensus 117 G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~---~~~~~~~~v~~ 193 (425)
T 1vp4_A 117 GSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDDGMDLNVLERKLSEFDKN---GKIKQVKFIYV 193 (425)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHT---TCGGGEEEEEE
T ss_pred cHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCCCCCHHHHHHHHHhhhhc---ccCCCceEEEE
Confidence 7889999999999999999999999999999999999988887765 3899999988752100 000145665 5
Q ss_pred EecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cE
Q psy15447 223 VEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GF 296 (457)
Q Consensus 223 ~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~ 296 (457)
+++++||+|.+.| +++|+++|++||+++|+||+|+.+.++.........++ +.+.+++++|+||++| +| ||
T Consensus 194 ~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~--~~~~~i~~~s~sK~~~-~G~r~G~ 270 (425)
T 1vp4_A 194 VSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIG--GPERVVLLNTFSKVLA-PGLRIGM 270 (425)
T ss_dssp ECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHH--CTTTEEEEEESTTTTC-GGGCEEE
T ss_pred CCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhC--CCCCEEEEeccccccc-cccceEE
Confidence 7889999999988 57899999999999999999987655322111111122 2344788999999998 55 99
Q ss_pred EEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH---hhCcHHHHHHHHHHHHHHHHhhcc-cccCCeEEeccCC
Q psy15447 297 CVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL---KANPSLLTKLREKCNTMHSLLSQH-KVTQRFLVQGHRD 372 (457)
Q Consensus 297 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~---~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~~ 372 (457)
+++++++++.+......+.+ +.+++.++++.++++.. +..++.+++++++.+++.+.|++. ...+++.+..+..
T Consensus 271 ~~~~~~~~~~l~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~ 348 (425)
T 1vp4_A 271 VAGSKEFIRKIVQAKQSADL--CSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEG 348 (425)
T ss_dssp EECCHHHHHHHHHHHHHHHS--SCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSB
T ss_pred EeeCHHHHHHHHHHhhhhcC--CCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCc
Confidence 99999998887654333333 34788888888888753 223456778888999999999872 1001677765566
Q ss_pred CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 373 TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 373 ~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
++++++.++... ...++++.|.++||.+.++..+... ....+++||+++.. |++++++++++|+++++++.
T Consensus 349 g~~~~~~~~~~~-------~~~~l~~~l~~~gi~v~~g~~f~~~-~~~~~~iRis~~~~-~~e~i~~~l~~l~~~l~~~~ 419 (425)
T 1vp4_A 349 GLFIWLTLPEGF-------DTWEMFEYAKRKKVFYVPGRVFKVY-DEPSPSMRLSFCLP-PDEKIVEGIKRLREVVLEYG 419 (425)
T ss_dssp SSEEEEECCTTC-------CTTTTHHHHHHHTEECEEGGGGCTT-CCCCSEEEEECSSS-CHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEEcCCCC-------CHHHHHHHHHHCCCEEECchhhcCC-CCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHHHHH
Confidence 788888886432 2346888999999999886543210 12357999999874 89999999999999988764
Q ss_pred C
Q psy15447 453 Q 453 (457)
Q Consensus 453 ~ 453 (457)
+
T Consensus 420 ~ 420 (425)
T 1vp4_A 420 K 420 (425)
T ss_dssp H
T ss_pred h
Confidence 3
No 76
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=1.3e-31 Score=266.20 Aligned_cols=335 Identities=12% Similarity=0.101 Sum_probs=241.2
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----CC-----CcEEEecc
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----GL-----EETALYSF 148 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~-----~~~i~~~s 148 (457)
.|+++|||+++.+ .++.+|.+.+++.+++++.... ++....|. .++++.+++++ |. +.++++++
T Consensus 45 ~g~~~idl~~g~~-~~~~~~~v~~a~~~~~~~~~~~--~y~~~~g~----~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G 117 (404)
T 2o1b_A 45 GPLPLINMAVGIP-DGPTPQGIIDHFQKALTIPENQ--KYGAFHGK----EAFKQAIVDFYQRQYNVTLDKEDEVCILYG 117 (404)
T ss_dssp CSSCCEECCCCSC-SSCCCHHHHHHHHHHTTCHHHH--SCCCTTCC----HHHHHHHHHHHHHHHCCCCCTTTSEEEESS
T ss_pred CCCCEEecCCcCC-CCCCCHHHHHHHHHHHhCCCCC--CCCCCCCC----HHHHHHHHHHHHHHhCCCCCCcccEEEcCC
Confidence 4788999998765 4556799999999988541110 11111233 45555555555 75 35677777
Q ss_pred cHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447 149 GFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFII 222 (457)
Q Consensus 149 G~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi 222 (457)
|++|+..++++++++||.|++..+.|..+...+...|.++..++. .|++++++.++. ++++|+
T Consensus 118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-----------~~~~v~ 186 (404)
T 2o1b_A 118 TKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIID-----------KTKLIY 186 (404)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHH-----------HEEEEE
T ss_pred cHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhcc-----------CceEEE
Confidence 789999999999999999999999988888888888988887764 367888887752 346777
Q ss_pred EecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cE
Q psy15447 223 VEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GF 296 (457)
Q Consensus 223 ~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~ 296 (457)
+++++||+|.+.| +++|+++|++||+++|+||+|+.+.++.....+....+ ..+.|++++|+||++|.+| ||
T Consensus 187 l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~--~~~~~i~~~s~sK~~g~~G~r~G~ 264 (404)
T 2o1b_A 187 LTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASEN--GKDVAIEIYSLSKGYNMSGFRVGF 264 (404)
T ss_dssp ECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTT--HHHHEEEEEESTTTTTCGGGCCEE
T ss_pred EcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCC--CCCCEEEEEecchhccCchhheEe
Confidence 7888999999987 78999999999999999999987654321111211111 1245789999999997555 99
Q ss_pred EEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCe
Q psy15447 297 CVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL-KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPL 375 (457)
Q Consensus 297 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~-~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~ 375 (457)
+++++++++.++.....+. .+.+++.++++.++++.. +..++.+++++++.+++.+.|++ .++.+..+..+.+
T Consensus 265 ~~~~~~~~~~l~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~ 338 (404)
T 2o1b_A 265 AVGNKDMIQALKKYQTHTN--AGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAK----ADLPFVHAKGGIY 338 (404)
T ss_dssp EEECHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH----TTCCEECCCBSSE
T ss_pred EecCHHHHHHHHHHHhhcc--CCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh----cCCeecCCCcceE
Confidence 9999999888865432222 345788888888887652 22245677888899999999988 3666654444556
Q ss_pred EEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 376 KYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 376 ~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
+++.++... ...+++++|+ ++||.+.++..+.. ...+++||+++. +++++++++++|++++++
T Consensus 339 ~~~~~~~~~-------~~~~l~~~l~~~~gi~v~~g~~f~~---~~~~~iRis~~~--~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 339 VWLETPPGY-------DSEQFEQFLVQEKSILVAPGKPFGE---NGNRYVRISLAL--DDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp EEEECCTTC-------CHHHHHHHHHHHHCEECEESGGGCG---GGTTEEEEECCS--CTTHHHHHHHHHHGGGGG
T ss_pred EEEeCCCCC-------CHHHHHHHHHHHCCEEEeCchhhCc---CCCCeEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 788876433 3457888887 57999988654321 135799999985 788999999999887654
No 77
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=8.5e-31 Score=260.91 Aligned_cols=340 Identities=12% Similarity=0.097 Sum_probs=239.3
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----CC-----CcEEEecc
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----GL-----EETALYSF 148 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~-----~~~i~~~s 148 (457)
+|+++|||+++.+ .++.+|.+.+++.+++++.... + |+......++++.+++++ |. +.++++++
T Consensus 35 ~g~~~idl~~g~~-~~~~~~~v~~a~~~~~~~~~~~--~----y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g 107 (412)
T 2x5d_A 35 RGEDIIDLSMGNP-DGPTPPHIVEKLCTVAQREDTH--G----YSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIG 107 (412)
T ss_dssp TTCCCEECSSCCC-CSCCCHHHHHHHHHTC---------------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESC
T ss_pred cCCCEEecCCCCC-CCCCCHHHHHHHHHHHhCCCCC--C----CCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCC
Confidence 6889999988764 4556899999999988763211 1 111122345666666655 73 47788888
Q ss_pred cHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCC-------HHHHHHHHHhhchhcccCCCCccEEE
Q psy15447 149 GFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNN-------MQHLEELLRQQDERDTLNSKVTKKFI 221 (457)
Q Consensus 149 G~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d-------~~~le~~l~~~~~~~~~~~~~~~~~v 221 (457)
|++|+..++.+++++||.|++..+.|..+...+...|.++..++.++ ++++++.+. +++++|
T Consensus 108 ~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~-----------~~~~~v 176 (412)
T 2x5d_A 108 SKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESI-----------PKPRMM 176 (412)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEE-----------SCCSEE
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcc-----------cCceEE
Confidence 99999999999999999999999999999888888899888887642 344444332 234677
Q ss_pred EEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccc-cCCCCccccccCCCCCCccEEEecCcccccCcc---
Q psy15447 222 IVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTL-GSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG--- 294 (457)
Q Consensus 222 i~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~-g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g--- 294 (457)
++++++||+|.+.| +++|+++|++||+++|+||+|+.+.+ |.....+....+. .+.|++++|+||++|.+|
T Consensus 177 ~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~ 254 (412)
T 2x5d_A 177 ILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGA--KDIAVEFFTLSKSYNMAGWRI 254 (412)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTG--GGTEEEEEECC-CCSCTTSCC
T ss_pred EECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCc--cCcEEEEecCccccCCcccce
Confidence 77788999999987 68999999999999999999987655 3222222222111 245799999999998555
Q ss_pred cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCC
Q psy15447 295 GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDT 373 (457)
Q Consensus 295 G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~ 373 (457)
||+++++++++.+........ .+.+++.++++.++++..++ .++++++++++.+++.+.|++ .++.+..+..+
T Consensus 255 G~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g 328 (412)
T 2x5d_A 255 GFMVGNPELVSALARIKSYHD--YGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLRE----AGWMVENPKAS 328 (412)
T ss_dssp EEEEECHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHH----HTCCCCCCSBS
T ss_pred EEEEcCHHHHHHHHHHHhhhc--cCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH----CCCEecCCCee
Confidence 999999999888765432222 34578888888777764321 235677888899999999988 36666533346
Q ss_pred CeEEEEecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 374 PLKYLYLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 374 ~~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
.++++.++..... ....++++.|++ +||++.++..+.. ...+++|++++. ++++++++++.|++++++..
T Consensus 329 ~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~f~~---~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~~~ 399 (412)
T 2x5d_A 329 MYVWAKIPEPYAH----LGSLEFAKKLLQDAKVSVSPGIGFGD---YGDDHVRFALIE--NRDRLRQAVRGIKAMFRADG 399 (412)
T ss_dssp SEEEEECCTTTGG----GCHHHHHHHHHHHHCEECEEGGGGCG---GGTTEEEEECCS--CHHHHHHHHHHHHHHHHHTT
T ss_pred eEEEEEcCCccCC----CCHHHHHHHHHHHCCEEEeCchhhCC---CCCCeEEEEecC--CHHHHHHHHHHHHHHHHhcC
Confidence 6778877532100 013568888875 6999988764321 235799999986 89999999999999988764
No 78
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=100.00 E-value=2.6e-32 Score=266.43 Aligned_cols=335 Identities=13% Similarity=0.060 Sum_probs=244.0
Q ss_pred eeeEE-eecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHH
Q psy15447 80 IPCIN-FATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIA 158 (457)
Q Consensus 80 ~~~id-~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~ 158 (457)
|+++| |.+++|+++++||.+.+++.+++++++. ...+..|+..+...+|++++++++|.+..+++++|++|+..+++
T Consensus 3 ~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~--~~~~~~y~~~~~~~~l~~~la~~~~~~~~i~~~~G~~a~~~al~ 80 (357)
T 3lws_A 3 NRLRTSFQQTTGQISGHGKRNVGVLKTAFAAVAD--EMASDQYGTGAIIEPFEQKFADVLGMDDAVFFPSGTMAQQVALR 80 (357)
T ss_dssp CHHHHHHHTCSEESSBSSCCBHHHHHHHHTTSCT--TCBCEETTEETTHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHH
T ss_pred chhhhHHHhhcccccCCCCCCHHHHHHHHHHhhc--ccCcccccCChHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHH
Confidence 56677 7889999999999999999999887652 23345677778889999999999999988999999999999999
Q ss_pred hhcCCCC--EEEEeCcccHHHHH---HHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447 159 AYVKRND--AVFVDENINFAIQT---GLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN 229 (457)
Q Consensus 159 a~~~~gd--~v~~~~~~h~~~~~---~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~ 229 (457)
+++.+|| .|+++..+|..... .....|.++..++.. |++++++.. + +++|++++++||
T Consensus 81 ~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~------------~-~~~v~~~~p~np 147 (357)
T 3lws_A 81 IWSDETDNRTVAYHPLCHLEIHEQDGLKELHPIETILVGAADRLMTLDEIKALP------------D-IACLLLELPQRE 147 (357)
T ss_dssp HHHHHHTCCEEEECTTCHHHHSSTTHHHHHSSCEEEECSCTTSCCCHHHHHTCC------------S-CSEEEEESSBGG
T ss_pred HHhhcCCCcEEEecccceeeeeccchhhhccCcEEEEecCCCCCcCHHHHhcCc------------C-cceEEEEccccc
Confidence 9988888 88888888877554 345668888877643 677776541 2 568899999998
Q ss_pred C-CCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEecHHHH
Q psy15447 230 S-ADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGSSYII 304 (457)
Q Consensus 230 ~-G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~~~~~ 304 (457)
+ |.+.| +++|+++|++||++||+||+|.++..+..+....... ...|+++.|+||++ |+.||+++++++++
T Consensus 148 ~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~----~~~d~~~~s~sK~~~~~~gg~~~~~~~~~ 223 (357)
T 3lws_A 148 IGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA----GLFDSIYISFYKGLGGIAGAILAGPAAFC 223 (357)
T ss_dssp GTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH----TTSSEEEEESSSTTCCSSCEEEEECHHHH
T ss_pred CCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH----hcCCEEEEeccccCCCCceEEEEcCHHHH
Confidence 7 88886 8899999999999999999987433222122221111 23467789999999 66789999999988
Q ss_pred HHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEe-ccCCCCeEEEEecCC
Q psy15447 305 EHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQ-GHRDTPLKYLYLQKS 383 (457)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~i~~~~~ 383 (457)
+.++.....+..+.......++++.++++...+ ..++..++.+++.+.|++ ++++++. .++.++++++.++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~l~~~L~~---~~g~~~~~~~~~~~~~~~~~~~~ 297 (357)
T 3lws_A 224 QTARIWKRRYGGDLISLYPYIVSADYYYELRKD---RMGQYYEQAKQLAEQFNA---LPGVHTTPEVPVSNMFHLHFDGQ 297 (357)
T ss_dssp HHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHT---STTEEEESSSCSSSEEEEEEESC
T ss_pred HHHHHHHHHhcCCcccchHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHh---CCCCeeccCCCcceEEEEEecCC
Confidence 887542211111111233344555566654322 345567888999999988 5688873 456788888888764
Q ss_pred cchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCC---CCHHHHHHHHHHHHHHH
Q psy15447 384 DDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNIS---HTEQDMNSLIETLCKSH 448 (457)
Q Consensus 384 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~---~t~edi~~~~~~l~~~~ 448 (457)
.. ....++.+.|.++||.++++..+ .++..++|+++... .++++++++++.|.+++
T Consensus 298 ~~-----~~~~~~~~~l~~~Gi~v~~g~~~----~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 298 AA-----DISPKLEQVQEETGLGFVGYLVD----KDGYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp HH-----HHHHHHHHHHHHHCEESCSCCEE----CSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred hH-----HHHHHHHHHHHhcCeEEeccccc----CCCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 20 13567888999999999887542 12335899988643 68899999999887754
No 79
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=3.9e-31 Score=258.90 Aligned_cols=321 Identities=12% Similarity=0.079 Sum_probs=245.3
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC--CcEEEecccHHHHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL--EETALYSFGFSTSASA 156 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~a 156 (457)
++++|||+++.. .++.+|++.+++.+++.... .+. .. ...++++++++++|. +.++++++|++++..+
T Consensus 29 ~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~-~y~-------~~-~~~~lr~~la~~~~~~~~~v~~~~g~~~a~~~~ 98 (365)
T 3get_A 29 VKEVIKLASNEN-PFGTPPKAIECLRQNANKAH-LYP-------DD-SMIELKSTLAQKYKVQNENIIIGAGSDQVIEFA 98 (365)
T ss_dssp CSCCEECSSCCC-TTCSCHHHHHHHHHHGGGTT-SCC-------CT-TCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHH
T ss_pred CCceEEecCCCC-CCCCCHHHHHHHHHHHHhhc-cCC-------CC-ChHHHHHHHHHHhCCCcceEEECCCHHHHHHHH
Confidence 378999998743 24468999999999987521 111 11 126899999999984 4778888999999999
Q ss_pred HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447 157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA 231 (457)
Q Consensus 157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G 231 (457)
+.+++++||.|++..++|..+...++..|.++..++. .|++++++.++ +++++|++++++||+|
T Consensus 99 ~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~-----------~~~~~v~~~~p~nptG 167 (365)
T 3get_A 99 IHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNLDEFKKLYETHK-----------DEIKLIFLCLPNNPLG 167 (365)
T ss_dssp HHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCHHHHHHHHHHTT-----------TTEEEEEEESSCTTTC
T ss_pred HHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHHHhC-----------CCCCEEEEcCCCCCCC
Confidence 9999999999999999999999999999999998886 35566666654 3467888889999999
Q ss_pred CCCChHHHHHHHH--HcCcEEEEEcCcccccc---cCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHH
Q psy15447 232 DICPLKDILSLRS--KYQARIFVDESVSFGTL---GSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYI 303 (457)
Q Consensus 232 ~i~~l~~i~~l~~--~~g~~li~DEa~~~g~~---g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~ 303 (457)
.+.|.+++.++++ ++|+++|+||+|+.+.+ +..........+. .+.+++++|+||++|..| |++++++++
T Consensus 168 ~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 245 (365)
T 3get_A 168 ECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKE--FDNVLYLGTFSKLYGLGGLRIGYGIANANI 245 (365)
T ss_dssp CCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHH--CTTEEEEEESSSTTSCTTTCCEEEEECHHH
T ss_pred CCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhcc--CCCEEEEeecchHhcCcchheEEEEcCHHH
Confidence 9999988888888 77999999999986552 2111122222111 234688999999997555 999999999
Q ss_pred HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCC
Q psy15447 304 IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKS 383 (457)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~ 383 (457)
++.++.....+ +.+++.++++.++++..+..++.+++++++.+++.+.|++ .++.+. ++.+.++++.++..
T Consensus 246 ~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----~g~~~~-~~~~~~~~~~~~~~ 316 (365)
T 3get_A 246 ISAFYKLRAPF----NVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKK----HNIKII-DSYTNFITYFFDEK 316 (365)
T ss_dssp HHHHHHHSCTT----CSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHH----TTCEEC-CCSSSEEEEECSSS
T ss_pred HHHHHHhcCCC----CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCEEC-CCCCeEEEEECCCC
Confidence 99887655432 3688888888888764333345778888999999999988 477765 55677788877653
Q ss_pred cchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 384 DDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 384 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
...++.+.|.++||.+.++..+ . .+++|++++ |++|+++++++|++++
T Consensus 317 --------~~~~~~~~l~~~gi~v~~g~~~-----~-~~~iRis~~---~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 317 --------NSTDLSEKLLKKGIIIRNLKSY-----G-LNAIRITIG---TSYENEKFFTEFDKIL 364 (365)
T ss_dssp --------CHHHHHHHHHTTTEECEECGGG-----T-CSEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred --------CHHHHHHHHHHCCEEEEECccC-----C-CCEEEEEcC---CHHHHHHHHHHHHHHh
Confidence 2357889999999999887643 2 589999986 8999999999999875
No 80
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=3.5e-30 Score=252.61 Aligned_cols=317 Identities=12% Similarity=0.118 Sum_probs=240.0
Q ss_pred EEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh------cCC--CcEEEecccHHHHH
Q psy15447 83 INFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASF------MGL--EETALYSFGFSTSA 154 (457)
Q Consensus 83 id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~------~g~--~~~i~~~sG~~a~~ 154 (457)
|||+++.+ .++.+|++.+++.+++++.+..... |+... ..++++.++++ ++. +.++++++|++++.
T Consensus 33 idl~~~~~-~~~~~~~v~~a~~~~~~~~~~~~~~----y~~~~-~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~ 106 (369)
T 3cq5_A 33 IRLNTNEN-PYPPSEALVADLVATVDKIATELNR----YPERD-AVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQ 106 (369)
T ss_dssp EECSSCCC-CSCCCHHHHHHHHHHHHHHGGGTTS----CCCTT-CHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH
T ss_pred eeccCCCC-CCCCCHHHHHHHHHHHHhccccccc----CCCcc-HHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHH
Confidence 89998866 5567899999999999874211111 11111 24677777776 342 35566667778999
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN 229 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~ 229 (457)
.++++++++||.|++..+.|..+...+...|.++..++.+ |++++++.+++. ++++|++++++||
T Consensus 107 ~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~----------~~~~v~~~~~~np 176 (369)
T 3cq5_A 107 QLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAK----------QPDIVFVTTPNNP 176 (369)
T ss_dssp HHHHHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHH----------CCSEEEEESSCTT
T ss_pred HHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhcc----------CCCEEEEeCCCCC
Confidence 9999999999999999999999988889999998887743 688998888641 3467778999999
Q ss_pred CCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC-ccEEEecCcccccCcc---cEEEecHHHHH
Q psy15447 230 SADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE-VDMIIGSLEHALGSVG---GFCVGSSYIIE 305 (457)
Q Consensus 230 ~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~-~Di~~~s~sK~lg~~g---G~v~~~~~~~~ 305 (457)
+|.+.|++++.++|+.+++++|+||+|+.+..+ .......+. .+ .+++++|+||++|.+| |++++++++++
T Consensus 177 tG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~---~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 251 (369)
T 3cq5_A 177 TGDVTSLDDVERIINVAPGIVIVDEAYAEFSPS---PSATTLLEK--YPTKLVVSRTMSKAFDFAGGRLGYFVANPAFID 251 (369)
T ss_dssp TCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCS---CCGGGGTTT--CTTTEEEEEESSSTTSCGGGCCEEEEECTHHHH
T ss_pred CCCCCCHHHHHHHHHhCCCEEEEECCchhhcCC---cchHHHHhh--CCCCEEEEEechHhcCCcccceEEEEeCHHHHH
Confidence 999999999999999999999999999866532 111121111 12 4688999999998656 99999999988
Q ss_pred HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc
Q psy15447 306 HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD 385 (457)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 385 (457)
.+......+ +.+++.++++.++++..+..++.+++++++.+++.+.|++ .|+.+. ++.++++++.++.
T Consensus 252 ~l~~~~~~~----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~~~~~~~~~--- 319 (369)
T 3cq5_A 252 AVMLVRLPY----HLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEE----LGYAVV-PSESNFVFFGDFS--- 319 (369)
T ss_dssp HHHTTSCTT----CSCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHH----HTCEEE-CCSSSEEEEECCS---
T ss_pred HHHHcCCCC----CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh----CCCEEC-CCCCeEEEEECCC---
Confidence 887544332 3588888888888875332345678888999999999988 577775 5567888887752
Q ss_pred hHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 386 EVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 386 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
...++.+.|.++||.+.++.. ++++|++++ +++|+++++++|+++++
T Consensus 320 ------~~~~l~~~l~~~gi~v~~~~~--------~~~iRis~~---~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 320 ------DQHAAWQAFLDRGVLIRDVGI--------AGHLRTTIG---VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp ------SHHHHHHHHHHTTEECBCCSC--------TTEEEEECC---CHHHHHHHHHHHHHHHT
T ss_pred ------CHHHHHHHHHHCCEEEEECCC--------CCeEEEEeC---CHHHHHHHHHHHHHHHh
Confidence 345788899999999987521 478999997 89999999999998763
No 81
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=1e-30 Score=257.31 Aligned_cols=338 Identities=14% Similarity=0.097 Sum_probs=242.7
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHh-cCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDK-NGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAI 157 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai 157 (457)
.|+|++++. ..+|++.+++.+++.+ |+.....+...++..+...++++.+++++|.+ .++++++|++|+..++
T Consensus 3 ~yld~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~ 78 (384)
T 1eg5_A 3 VYFDNNATT----RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWIL 78 (384)
T ss_dssp EECBTTTCC----CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHH
T ss_pred EEEecCccC----CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHH
Confidence 356666542 3479999999999986 22211112122344667789999999999965 6788888999999999
Q ss_pred Hhhc----CCCCEEEEeCcccHHHHHHH---HhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEec
Q psy15447 158 AAYV----KRNDAVFVDENINFAIQTGL---IASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEG 225 (457)
Q Consensus 158 ~a~~----~~gd~v~~~~~~h~~~~~~~---~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~ 225 (457)
.++. ++||.|++..+.|.+....+ ...|.++..++. .|++++++.+++ ++++|++++
T Consensus 79 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----------~~~~v~~~~ 147 (384)
T 1eg5_A 79 KTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDE-----------DTFLVSIMA 147 (384)
T ss_dssp HHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCT-----------TEEEEEEES
T ss_pred HhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCC-----------CCeEEEEEC
Confidence 9987 79999999999998876655 677888888875 378888887742 457888899
Q ss_pred CCCCCCCCCChHHHHHHHHHcC--cEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHH
Q psy15447 226 VYMNSADICPLKDILSLRSKYQ--ARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSY 302 (457)
Q Consensus 226 v~~~~G~i~~l~~i~~l~~~~g--~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~ 302 (457)
++|++|.+.|+++|.++|++|| +++|+||+|++|... .++...+.|+++.|++|.+|+.| |+++++++
T Consensus 148 ~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~---------~~~~~~~~di~~~s~sK~~g~~G~G~~~~~~~ 218 (384)
T 1eg5_A 148 ANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIP---------FSLEKLEVDYASFSAHKFHGPKGVGITYIRKG 218 (384)
T ss_dssp BCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSC---------CCCTTTCCSEEEEEGGGGTSCTTCEEEEECTT
T ss_pred CCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcc---------cCchhcCCCEEEecHHHhcCCCceEEEEEcCC
Confidence 9999999999999999999999 999999999865321 11211245899999999998766 99998886
Q ss_pred H--HHHHHhhCC-cceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC---CCCe
Q psy15447 303 I--IEHHRLSGS-GYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR---DTPL 375 (457)
Q Consensus 303 ~--~~~~~~~~~-~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~---~~~~ 375 (457)
+ ...+..... ......+.++..++++.++++...+. ++.+++++++.+++.+.|++ .++++..+. .+.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~ 294 (384)
T 1eg5_A 219 VPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMN----LGAHIITPLEISLPNT 294 (384)
T ss_dssp SCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHT----TTCEECSCTTSBCTTE
T ss_pred CccccccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC----CCeEEeCCcccCCCCE
Confidence 5 211111000 00123356788888888888775433 56788899999999999988 677775432 2356
Q ss_pred EEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc----------C----CCCCeEEEEecCCCCHHHHHHHH
Q psy15447 376 KYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA----------K----KQKPSIRITCNISHTEQDMNSLI 441 (457)
Q Consensus 376 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~----------~----~~~~~lRi~~~~~~t~edi~~~~ 441 (457)
+.+.+... ...++.+.|.++||.+.++..+.... . ...+++||+++..+|++|+++++
T Consensus 295 ~~~~~~~~--------~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~ 366 (384)
T 1eg5_A 295 LSVSFPNI--------RGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFL 366 (384)
T ss_dssp EEEECTTC--------CHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHH
T ss_pred EEEEeCCC--------CHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHH
Confidence 66766532 24578889999999998754321100 0 01368999999889999999999
Q ss_pred HHHHHHHHHhcCC
Q psy15447 442 ETLCKSHDIAVQP 454 (457)
Q Consensus 442 ~~l~~~~~~~~~~ 454 (457)
++|++++++++..
T Consensus 367 ~~l~~~~~~~~~~ 379 (384)
T 1eg5_A 367 KKIEEILSFLDLT 379 (384)
T ss_dssp HHHHHHHHHC---
T ss_pred HHHHHHHHHHHhh
Confidence 9999999887653
No 82
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=4.2e-31 Score=265.04 Aligned_cols=308 Identities=12% Similarity=0.048 Sum_probs=224.4
Q ss_pred HHHHHHHHHhhcC----------CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHH-hcCCeEEEecCC-
Q psy15447 127 HLDLENDIASFMG----------LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLI-ASRCKVQYFKHN- 194 (457)
Q Consensus 127 ~~~l~~~la~~~g----------~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~-~~g~~~~~~~~~- 194 (457)
..+|+++++++++ .+.++++++|++|+..++.+++++||.|+++.++|.++..++. ..|.+++.++++
T Consensus 88 ~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~ 167 (435)
T 3piu_A 88 LPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTS 167 (435)
T ss_dssp CHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCG
T ss_pred cHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCC
Confidence 4677778877776 5678889999999999999999999999999999999888887 789999888764
Q ss_pred ------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCC
Q psy15447 195 ------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTG 265 (457)
Q Consensus 195 ------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g 265 (457)
|++++++.+++.... ..++++|++++++||+|.+.| +++|+++|++||++||+||+|+.+.++...
T Consensus 168 ~~~~~~d~~~l~~~l~~~~~~-----~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~ 242 (435)
T 3piu_A 168 SNGFQITETALEEAYQEAEKR-----NLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPS 242 (435)
T ss_dssp GGTSCCCHHHHHHHHHHHHHT-----TCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSC
T ss_pred ccCCcCCHHHHHHHHHHHHhc-----CCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC
Confidence 799999999764321 135678889999999999988 578889999999999999999876554322
Q ss_pred CccccccC----CC-----CCCccEEEecCcccccCcc---cEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHH
Q psy15447 266 HGVTEYFG----VS-----TEEVDMIIGSLEHALGSVG---GFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKAL 332 (457)
Q Consensus 266 ~~~~~~~~----~~-----~~~~Di~~~s~sK~lg~~g---G~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l 332 (457)
........ ++ + +.+++++|+||++|..| |++++ ++.+.+.++..... + ..+++.++++.+.+
T Consensus 243 ~~~~~~~~~~~~~d~~~~~~-~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~l 317 (435)
T 3piu_A 243 FISVMEVLKDRNCDENSEVW-QRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSF--G--LVSSQTQHLLSAML 317 (435)
T ss_dssp CCCHHHHHHC-------CGG-GGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHGGG--S--CCCHHHHHHHHHHH
T ss_pred CcCHHHhccccccccccCCC-CCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHHhhc--C--CCCHHHHHHHHHHh
Confidence 22111111 11 2 23488999999998655 99888 56777766543321 2 23566656555555
Q ss_pred HHH---hh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeE
Q psy15447 333 HLL---KA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAI 407 (457)
Q Consensus 333 ~~~---~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v 407 (457)
+.. ++ .++.+++++++.+++.+.|++ .|+.+..+..+.++++.++..... .......+++++|+++ ||++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~l~~~~~~-~~~~~~~~~~~~l~~~~gi~v 392 (435)
T 3piu_A 318 SDKKLTKNYIAENHKRLKQRQKKLVSGLQK----SGISCLNGNAGLFCWVDMRHLLRS-NTFEAEMELWKKIVYEVHLNI 392 (435)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TTCEECCCCSSSEEEEECGGGSSS-SSHHHHHHHHHHHHHTSCEEC
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCcccCCCeeEEEEEEccccccc-CCchhHHHHHHHHHHHCCEEE
Confidence 422 21 134677888999999999988 578776555568888888653110 0011345788888887 9999
Q ss_pred eccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 408 TCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 408 ~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
.++..+. +..++++||+++.. |++++++++++|+++++++.+
T Consensus 393 ~~g~~~~---~~~~~~iRi~~~~~-~~e~i~~~l~~l~~~l~~~~~ 434 (435)
T 3piu_A 393 SPGSSCH---CTEPGWFRVCFANL-PERTLDLAMQRLKAFVGEYYN 434 (435)
T ss_dssp EEGGGGT---CSSTTEEEEECSSS-CHHHHHHHHHHHHHHHHHHC-
T ss_pred eCCcccC---CCCCCEEEEEeeCC-CHHHHHHHHHHHHHHHHHHhC
Confidence 8865432 23467999999654 999999999999999987653
No 83
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=1.2e-30 Score=254.99 Aligned_cols=334 Identities=11% Similarity=0.088 Sum_probs=240.1
Q ss_pred eeecCCCcEEE--ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC--C
Q psy15447 66 VVDQKSGYIVN--INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL--E 141 (457)
Q Consensus 66 ~i~~~~g~~~~--~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~ 141 (457)
.+..+.+.+.+ .+|+++|||+++.. .++.+|++.+++.+++++... + ..+...+++++++++++. +
T Consensus 10 ~~~~g~~~~~~~~~~~~~~idl~~~~~-~~~~~~~v~~a~~~~~~~~~~-y--------~~~~~~~l~~~la~~~~~~~~ 79 (361)
T 3ftb_A 10 LMIHGGDIYTEGVFKGRELLDYSSNIN-PLGIPKSFLNNIDEGIKNLGV-Y--------PDVNYRRLNKSIENYLKLKDI 79 (361)
T ss_dssp ------------------CEETTCCCC-TTCSCHHHHTTHHHHHHGGGS-C--------CCTTCHHHHHHHHHHHTCCSC
T ss_pred cccCCCCHHHHhhcCCCCEEEecCCCC-CCCCCHHHHHHHHHHHHHhcC-C--------CCccHHHHHHHHHHHhCCCcc
Confidence 34444444433 38999999998743 233579999999999986321 1 112347899999999984 4
Q ss_pred cEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCC
Q psy15447 142 ETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKV 216 (457)
Q Consensus 142 ~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~ 216 (457)
.++++++|++|+..++.++ |.|++..++|..+...+...|.++..++.+ +++++++.+++
T Consensus 80 ~i~~~~g~t~al~~~~~~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~----------- 144 (361)
T 3ftb_A 80 GIVLGNGASEIIELSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIISKIDD----------- 144 (361)
T ss_dssp EEEEESSHHHHHHHHHTTC----SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHTTT-----------
T ss_pred eEEEcCCHHHHHHHHHHHc----CcEEEecCChHHHHHHHHHcCCeEEEeecCcccCCCHHHHHHhccC-----------
Confidence 6677788889999999887 889999999999988999999998887743 56777777642
Q ss_pred ccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc
Q psy15447 217 TKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV 293 (457)
Q Consensus 217 ~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~ 293 (457)
++++++++++||+|.+.| +++|+++|++||+++|+||+|+.+..+ .+.......+.. +.++++.|+||.+|..
T Consensus 145 -~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~--~~~i~~~s~sK~~~~~ 220 (361)
T 3ftb_A 145 -VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNY--SCLFIIRAMTKFFAMP 220 (361)
T ss_dssp -CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTC--SSEEEEEESSSTTSCG
T ss_pred -CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCC-cccchhHhcccC--CCEEEEeeChhhcCCC
Confidence 467788888999999988 667888888999999999999876554 223333333322 2358889999999755
Q ss_pred c---cEEE-ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeE-Ee
Q psy15447 294 G---GFCV-GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFL-VQ 368 (457)
Q Consensus 294 g---G~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~-~~ 368 (457)
| |+++ +++++++.++..... .+.+++.++++.++++..+..++.+++++++.+++.+.|++ .+++. +.
T Consensus 221 G~r~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~~~~~ 293 (361)
T 3ftb_A 221 GIRFGYGITNNKEIAAKIKAKQNP----WNINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNK---IGFIKRVF 293 (361)
T ss_dssp GGCCEEEEESCHHHHHHHHTTSCT----TCSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHH---SSSEEEEE
T ss_pred CcceeEEEeCCHHHHHHHHhhCCC----CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh---CCCCceec
Confidence 5 8887 899999988765432 25688888888887763222245677888899999999988 56787 54
Q ss_pred ccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 369 GHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 369 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
++.+.++++.++. . ...++.+.|.++||.++++..+. ....+++|++++ +++++++++++|+++.
T Consensus 294 -~~~~~~~~~~~~~-~-------~~~~l~~~l~~~gi~v~~g~~~~---~~~~~~iRis~~---~~~~~~~l~~~l~~~~ 358 (361)
T 3ftb_A 294 -SPHANFVLCRLEN-I-------SGEKLYDSLLKEDIVIRRCCNFI---GLDDSFVRFAIK---DEKKNTKFLRALKGVE 358 (361)
T ss_dssp -CCSSSEEEEEESS-S-------CHHHHHHHHHTTTEECEECTTST---TCCTTEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred -CCCCeEEEEEcCC-C-------CHHHHHHHHHHCCeEEeeCccCC---CCCCCEEEEEcC---CHHHHHHHHHHHHHHH
Confidence 5667888888765 2 34578999999999998865431 133679999986 8999999999998876
Q ss_pred HH
Q psy15447 449 DI 450 (457)
Q Consensus 449 ~~ 450 (457)
+.
T Consensus 359 ~~ 360 (361)
T 3ftb_A 359 NN 360 (361)
T ss_dssp HT
T ss_pred hc
Confidence 53
No 84
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=1e-30 Score=258.70 Aligned_cols=346 Identities=13% Similarity=0.076 Sum_probs=250.5
Q ss_pred cCCCcEEE-ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC-----CC-
Q psy15447 69 QKSGYIVN-INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG-----LE- 141 (457)
Q Consensus 69 ~~~g~~~~-~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-----~~- 141 (457)
.+.+.+++ .+|+++|||+++.. .+..+|.+.+++.+++.... .+....|..++..++++.+.+.+| .+
T Consensus 18 ~~~~~~~~~~~g~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~----~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~ 92 (396)
T 3jtx_A 18 HEAMQGISAPEGMEAVPLHIGEP-KHPTPKVITDALTASLHELE----KYPLTAGLPELRQACANWLKRRYDGLTVDADN 92 (396)
T ss_dssp HHHTTTCCCCTTCCCEECSCCSC-CSCCCHHHHHHHHHTGGGGG----SCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTT
T ss_pred HHHHHhhhhccCCCeEEeCCcCC-CCCCCHHHHHHHHHHhhhcc----CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 34445555 57999999998763 55568999999999886421 122234556777777777777666 34
Q ss_pred cEEEecccHHHHHHHHHhhcCCC-----CEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhc
Q psy15447 142 ETALYSFGFSTSASAIAAYVKRN-----DAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERD 210 (457)
Q Consensus 142 ~~i~~~sG~~a~~~ai~a~~~~g-----d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~ 210 (457)
.++++++|++++..++.+++++| |.|++..++|..+...+...|.++..++.+ |++++++.+.+
T Consensus 93 ~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~----- 167 (396)
T 3jtx_A 93 EILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWK----- 167 (396)
T ss_dssp SEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHH-----
T ss_pred eEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhcc-----
Confidence 67788888899999999999996 799999999999988899999998888752 67888888864
Q ss_pred ccCCCCccEEEEEecCCCCCCCCCCh---HHHHHHHHHcCcEEEEEcCcccccccC-CCCccccc---cCCCCCCccEEE
Q psy15447 211 TLNSKVTKKFIIVEGVYMNSADICPL---KDILSLRSKYQARIFVDESVSFGTLGS-TGHGVTEY---FGVSTEEVDMII 283 (457)
Q Consensus 211 ~~~~~~~~~~vi~e~v~~~~G~i~~l---~~i~~l~~~~g~~li~DEa~~~g~~g~-~g~~~~~~---~~~~~~~~Di~~ 283 (457)
++++|++++++||+|.+.|. ++|+++|++||+++|+||+|+.+.++. ...+.... ++.. .+.++++
T Consensus 168 ------~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~ 240 (396)
T 3jtx_A 168 ------RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRS-RQKLLMF 240 (396)
T ss_dssp ------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCC-CTTEEEE
T ss_pred ------CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccc-cCcEEEE
Confidence 34677777889999999985 459999999999999999998654432 11111110 1111 2447889
Q ss_pred ecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccc
Q psy15447 284 GSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHK 360 (457)
Q Consensus 284 ~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~ 360 (457)
.|+||++|.+| ||+++++++++.+..... .++.+.+++.++++.++++..+...+.+++++++.+++.+.|++
T Consensus 241 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~-- 316 (396)
T 3jtx_A 241 TSLSKRSNVPGLRSGFVAGDAELLKNFLLYRT--YHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQ-- 316 (396)
T ss_dssp EESTTTSSCGGGCCEEEEECHHHHHHHHHHHH--HHTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred eccccccCCcccceEEEEeCHHHHHHHHHHHh--hcccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 99999987655 999999999988865432 23335688888888888764222245677888888999998887
Q ss_pred ccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccc---cCCCCCeEEEEecCCCCHHH
Q psy15447 361 VTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQE---AKKQKPSIRITCNISHTEQD 436 (457)
Q Consensus 361 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~---~~~~~~~lRi~~~~~~t~ed 436 (457)
. +.+..+..+.++++.++.. ...++++.|++ +||.+.++.++... .....+++||+++. ++++
T Consensus 317 -~--~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~--~~~~ 383 (396)
T 3jtx_A 317 -V--FDVKLPDASFYIWLKVPDG--------DDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA--DVAT 383 (396)
T ss_dssp -T--SCCCCCSSSSEEEEECTTS--------CHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS--CHHH
T ss_pred -c--CCccCCCeeEEEEEECCCC--------CHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC--CHHH
Confidence 2 2233345577888887652 34568888864 69999987754320 01236899999875 9999
Q ss_pred HHHHHHHHHHHH
Q psy15447 437 MNSLIETLCKSH 448 (457)
Q Consensus 437 i~~~~~~l~~~~ 448 (457)
+++++++|++++
T Consensus 384 i~~~l~~l~~~l 395 (396)
T 3jtx_A 384 CVKAAEDIVSLY 395 (396)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 999999998764
No 85
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=8.8e-32 Score=271.08 Aligned_cols=342 Identities=12% Similarity=0.095 Sum_probs=244.8
Q ss_pred ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----C--CCcEEEecccH
Q psy15447 77 INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----G--LEETALYSFGF 150 (457)
Q Consensus 77 ~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g--~~~~i~~~sG~ 150 (457)
.+|+++|||+++. .++..+|.+.+++.+++++++.... ...|+......+|++++++++ + .+.++++++++
T Consensus 66 ~~~~~~i~l~~g~-~~~~~~~~v~~a~~~~~~~~~~~~~--~~~y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~ 142 (449)
T 3qgu_A 66 NPDAKIISLGIGD-TTEPLPKYIADAMAKAAAGLATREG--YSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSK 142 (449)
T ss_dssp CTTCCCEECSSCC-CCCCCCHHHHHHHHHHHHGGGGSCC--CCCSTTTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHH
T ss_pred CCCCCEEEeeCCC-CCCCCCHHHHHHHHHHHHhhccccC--CCCCCCCCCcHHHHHHHHHHHHcCCCCCHHHEEEccCHH
Confidence 4689999999874 5676789999999999987542111 112333344578888888887 3 34556666667
Q ss_pred HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCe----------EEEecCCCHHHHHHHHHhhchhcccCCCCccEE
Q psy15447 151 STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCK----------VQYFKHNNMQHLEELLRQQDERDTLNSKVTKKF 220 (457)
Q Consensus 151 ~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~----------~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~ 220 (457)
+++..+ .+++++||.|+++.++|..+...+...|.+ +..++.++.+.+...+.+. +++++
T Consensus 143 ~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 212 (449)
T 3qgu_A 143 CDIARI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA---------KRTDI 212 (449)
T ss_dssp HHHHHH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC---------CCCSE
T ss_pred HHHHHH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc---------CCCCE
Confidence 787777 888899999999999999999999998988 8888876443332222211 24567
Q ss_pred EEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---
Q psy15447 221 IIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG--- 294 (457)
Q Consensus 221 vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g--- 294 (457)
|++++++||+|.+.+ +++|+++|++||+++|+||+|+.+.++..+......++.. .+.++++.|+||++|..|
T Consensus 213 v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~ 291 (449)
T 3qgu_A 213 IFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGA-DEVAIETCSFSKYAGFTGVRL 291 (449)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTG-GGTEEEEEECSGGGTCTTCCC
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCC-CCcEEEEecchhhcCCcccee
Confidence 777799999999988 7789999999999999999998765543222222222211 245799999999998666
Q ss_pred cEEEecHHHHH--------HHHhhCCcceecCCCcHHHHHHHHHHHHH--HhhCcHHHHHHHHHHHHHHHHhhcccccCC
Q psy15447 295 GFCVGSSYIIE--------HHRLSGSGYCFSASLPPFLAVAANKALHL--LKANPSLLTKLREKCNTMHSLLSQHKVTQR 364 (457)
Q Consensus 295 G~v~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~aaa~a~l~~--~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~ 364 (457)
||+++++++++ .+.... ...++ +.+++.++++.++++. .+..++++++++++.+++.+.|++ .|
T Consensus 292 G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g 365 (449)
T 3qgu_A 292 GWTVVPKALKYANGEPVHADWNRVM-TTCFN-GASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTE----MG 365 (449)
T ss_dssp EEEECCTTCBCTTSCBHHHHHHHHH-HHSCC-CCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHH----TT
T ss_pred EEEecCHHHHhhhhhhHHHHHHHHh-hcccC-CCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHH----CC
Confidence 99999887764 222111 12222 3578888888777654 222345788899999999999998 47
Q ss_pred eEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHH
Q psy15447 365 FLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIET 443 (457)
Q Consensus 365 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~ 443 (457)
+.+..+..++++++.++ .. ...++++.|+++ ||++.++..+. +.+.+++||++. .|++++++++++
T Consensus 366 ~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~l~~~~gI~v~pg~~f~---~~~~~~iRis~~--~~~e~i~~~l~~ 432 (449)
T 3qgu_A 366 FSVYGGDDAPYIWVGFP-GK-------PSWDVFAEILERCNIVTTPGSGYG---PAGEGFVRASAF--GSRENILEAVRR 432 (449)
T ss_dssp CCEEESSSSSEEEEECT-TS-------CHHHHHHHHHHHHCEECEEGGGGC---GGGTTEEEEECC--SCHHHHHHHHHH
T ss_pred CeeeCCCCeeEEEEECC-CC-------CHHHHHHHHHHHCCEEEecchHhC---CCCCCeEEEEec--CCHHHHHHHHHH
Confidence 77765566888888887 33 345788888876 99998876532 123589999954 599999999999
Q ss_pred HHHHHHHh
Q psy15447 444 LCKSHDIA 451 (457)
Q Consensus 444 l~~~~~~~ 451 (457)
|+++++.-
T Consensus 433 l~~~~~~~ 440 (449)
T 3qgu_A 433 FKEAYGKR 440 (449)
T ss_dssp HHHHHC--
T ss_pred HHHHHHhc
Confidence 99887543
No 86
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=6.3e-31 Score=257.61 Aligned_cols=321 Identities=10% Similarity=0.046 Sum_probs=245.3
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC---CcEEEecccHHHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL---EETALYSFGFSTSAS 155 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~---~~~i~~~sG~~a~~~ 155 (457)
.+++|||+++. ..+..+|++.+++.+++.+..... |+ .+...++++++++++|. +.++++++|++|+..
T Consensus 29 ~~~~i~l~~~~-~~~~~~~~v~~a~~~~~~~~~~~~------y~-~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~ 100 (367)
T 3euc_A 29 SHGLVKLDAME-NPYRLPPALRSELAARLGEVALNR------YP-VPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISM 100 (367)
T ss_dssp CTTCEECCSSC-CCCCCCHHHHHHHHHHHHHHHTTC------SC-CCCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHH
T ss_pred CCCeeEccCCC-CCCCCCHHHHHHHHHHhhhhhhhc------CC-CCcHHHHHHHHHHHhCCCCcceEEEcCCHHHHHHH
Confidence 36789999875 345568999999999998532111 11 12357899999999997 567788888899999
Q ss_pred HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447 156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS 230 (457)
Q Consensus 156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~ 230 (457)
++++++++||.|++..+.|..+...++..|.++..++. .|++++++.+++. ++++|++++++||+
T Consensus 101 ~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~----------~~~~v~~~~~~npt 170 (367)
T 3euc_A 101 LALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEH----------QPAIVYLAYPNNPT 170 (367)
T ss_dssp HHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHH----------CCSEEEEESSCTTT
T ss_pred HHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHHHhhcc----------CCCEEEEcCCCCCC
Confidence 99999999999999999998888888888999888774 3899999998752 34677788999999
Q ss_pred CCCCC---hHHHHHHHHHc--CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHH
Q psy15447 231 ADICP---LKDILSLRSKY--QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSY 302 (457)
Q Consensus 231 G~i~~---l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~ 302 (457)
|.+.| +++|+++|++| |+++|+||+|+... + .+.....+. .+.++++.|+||+ +..| ||++++++
T Consensus 171 G~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~-~---~~~~~~~~~--~~~~i~~~s~sK~-~~~G~r~G~~~~~~~ 243 (367)
T 3euc_A 171 GNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFA-Q---ESWMSRLTD--FGNLLVMRTVSKL-GLAGIRLGYVAGDPQ 243 (367)
T ss_dssp CCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSS-S---CCSGGGGGT--CTTEEEEEECCCT-TSCSCCEEEEEECHH
T ss_pred CCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhc-c---cchHHHHhh--CCCEEEEecchhh-cccccCceeeeeCHH
Confidence 99976 67888889999 99999999997532 1 112212222 2346889999999 6555 99999999
Q ss_pred HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecC
Q psy15447 303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQK 382 (457)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~ 382 (457)
+++.+...... .+.+++.++++.++++..+..++.+++++++.+++.+.|++ ++++.+. ++.+.++++.++
T Consensus 244 ~~~~~~~~~~~----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~---~~g~~~~-~~~~~~~~~~~~- 314 (367)
T 3euc_A 244 WLEQLDKVRPP----YNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAA---HGGVTVF-PSAANFLLARVP- 314 (367)
T ss_dssp HHHHHGGGCCS----SCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHT---STTCEEC-CCSSSEEEEECS-
T ss_pred HHHHHHHhCCC----CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh---CCCcEEC-CCCCeEEEEECC-
Confidence 99888755432 24688888888888765322345778888999999999988 4688754 566778888776
Q ss_pred CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 383 SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 383 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
+ ..++.+.|.++||+++++..+. ....+++|++++ |++|+++++++|++++
T Consensus 315 ~---------~~~l~~~l~~~gi~v~~~~~~~---~~~~~~iRis~~---~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 315 D---------AAQTFDRLLARKVLIKNVSKMH---PLLANCLRVTVS---TPEENAQFLEAFAASL 365 (367)
T ss_dssp C---------HHHHHHHHHTTTEECEECGGGC---GGGTTEEEEECC---CHHHHHHHHHHHHHHT
T ss_pred C---------HHHHHHHHHHCCeEEEECCccC---CCCCCEEEEecC---CHHHHHHHHHHHHHHh
Confidence 2 2468888999999998765431 123579999976 8999999999999875
No 87
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=2.9e-31 Score=262.94 Aligned_cols=343 Identities=13% Similarity=0.144 Sum_probs=247.2
Q ss_pred CeeeEEeecCC--ccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC--CcEEEecccHHHHH
Q psy15447 79 GIPCINFATHN--YLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL--EETALYSFGFSTSA 154 (457)
Q Consensus 79 G~~~id~~s~~--~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~ 154 (457)
++++|||+++. +.++ +++++.+++.+++++.+.... .|+......++++.+++++|. +.++++++|++++.
T Consensus 31 ~~~~i~l~~g~~~~~~~-~~~~v~~a~~~~~~~~~~~~~----~y~~~~~~~~l~~~la~~~g~~~~~v~~~~g~~~al~ 105 (397)
T 2zyj_A 31 RPGILSFAGGLPAPELF-PKEEAAEAAARILREKGEVAL----QYSPTEGYAPLRAFVAEWIGVRPEEVLITTGSQQALD 105 (397)
T ss_dssp STTCEEESSCCCCGGGC-CHHHHHHHHHHHHHHHHHHHT----SCCCTTCCHHHHHHHHHHHTSCGGGEEEESHHHHHHH
T ss_pred CCCceecCCCCCCchhC-CHHHHHHHHHHHHHhcchhhh----CCCCCCCCHHHHHHHHHHhCCChhhEEEeccHHHHHH
Confidence 45789998763 3222 468899999999876421000 111222347788899998885 45677777889999
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC----CCHHHHHHHHHhhchhcccCCCCccEEE-EEecCCCC
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH----NNMQHLEELLRQQDERDTLNSKVTKKFI-IVEGVYMN 229 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~----~d~~~le~~l~~~~~~~~~~~~~~~~~v-i~e~v~~~ 229 (457)
.++++++++||.|++..+.|..+...+...|.++..++. .|++++++.+++. ++++| ++++++||
T Consensus 106 ~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~d~~~l~~~l~~~----------~~~~v~~~~~~~np 175 (397)
T 2zyj_A 106 LVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEEGPDLDALEEVLKRE----------RPRFLYLIPSFQNP 175 (397)
T ss_dssp HHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECHHHHHHHHHHC----------CCSCEEECCBSCTT
T ss_pred HHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCCCCCHHHHHHHHhhc----------CCeEEEECCCCcCC
Confidence 999999999999999999999998888889988887765 3899999988751 23454 67888999
Q ss_pred CCCCCCh---HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCC---CccEEEecCcccccCcc---cEEEec
Q psy15447 230 SADICPL---KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTE---EVDMIIGSLEHALGSVG---GFCVGS 300 (457)
Q Consensus 230 ~G~i~~l---~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~---~~Di~~~s~sK~lg~~g---G~v~~~ 300 (457)
+|.+.|. ++|+++|++||+++|+||+|+.+.++.........++ ++ +.+++++|+||++| +| ||++++
T Consensus 176 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~--~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~ 252 (397)
T 2zyj_A 176 TGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELA--REAGYPGVIYLGSFSKVLS-PGLRVAFAVAH 252 (397)
T ss_dssp TCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHH--HHHTCCCEEEEEESTTTTC-GGGCCEEEECC
T ss_pred CCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhC--cccCCCeEEEEeccccccc-ccceeEEEecC
Confidence 9999884 5999999999999999999987654321111111122 11 23588999999998 54 999999
Q ss_pred HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH--hhCcHHHHHHHHHHHHHHHHhhcccccC-CeEEeccCCCCeEE
Q psy15447 301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL--KANPSLLTKLREKCNTMHSLLSQHKVTQ-RFLVQGHRDTPLKY 377 (457)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~--~~~~~~~~~l~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~ 377 (457)
+++++.+......+.++ .+++.++++.++++.. +..++.+++++++.+++.+.|++. .+ |+.+..+..+.+++
T Consensus 253 ~~~~~~l~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~g~~~~~~~~g~~~~ 328 (397)
T 2zyj_A 253 PEALQKLVQAKQGADLH--TPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDRE--VPKEVRYTRPKGGMFVW 328 (397)
T ss_dssp HHHHHHHHHHHHHHHSS--CCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHH--SCTTSEECCCSBSSEEE
T ss_pred HHHHHHHHHHHHhhcCC--CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCeEEccCCccEEEE
Confidence 99988876544333333 3777777777776532 112345677788888898888761 13 67765555678888
Q ss_pred EEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 378 LYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 378 i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+.++... ...++.+.|.++||.+.++..+... ....+++||+++.. |++|+++++++|+++++++.
T Consensus 329 ~~~~~~~-------~~~~~~~~l~~~gi~v~~g~~f~~~-~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~~ 394 (397)
T 2zyj_A 329 MELPKGL-------SAEGLFRRALEENVAFVPGGPFFAN-GGGENTLRLSYATL-DREGIAEGVRRLGRALKGLL 394 (397)
T ss_dssp EECSTTC-------CHHHHHHHHHHTTEEEEESGGGCTT-SCCTTEEEEECSSS-CHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------CHHHHHHHHHHCCCEEechHHhcCC-CCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHHHHH
Confidence 8886533 3457899999999999886543210 12357999999874 89999999999999887653
No 88
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=1e-30 Score=261.11 Aligned_cols=350 Identities=13% Similarity=0.080 Sum_probs=248.3
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-----CcEEEecccHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-----EETALYSFGFSTS 153 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-----~~~i~~~sG~~a~ 153 (457)
+..+|||+.+.. ++..+|++.+++.+++.+.. ....+....|..+...++++.+.+.+|. +.++++++|++|+
T Consensus 27 ~~~~i~l~~g~~-~~~~~~~v~~a~~~~~~~~~-~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~ 104 (422)
T 3fvs_A 27 EHDVVNLGQGFP-DFPPPDFAVEAFQHAVSGDF-MLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGAL 104 (422)
T ss_dssp TSCCEECCCSSC-SSCCCHHHHHHHHHHHHSCG-GGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHH
T ss_pred cCCceEeCCCCC-CCCCCHHHHHHHHHHHhCCC-ccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHH
Confidence 457899998764 56678999999999997622 0111222234455666666666655553 4678888889999
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----------------CHHHHHHHHHhhchhcccCCCC
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----------------NMQHLEELLRQQDERDTLNSKV 216 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----------------d~~~le~~l~~~~~~~~~~~~~ 216 (457)
..++.+++++||.|++..++|..+...+...|.++..++.+ |++++++.++ +
T Consensus 105 ~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~-----------~ 173 (422)
T 3fvs_A 105 FTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFT-----------S 173 (422)
T ss_dssp HHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCC-----------T
T ss_pred HHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcC-----------C
Confidence 99999999999999999999988888888899888877643 6777777663 2
Q ss_pred ccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc
Q psy15447 217 TKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV 293 (457)
Q Consensus 217 ~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~ 293 (457)
++++|++++++||+|.+.| +++|+++|++||+++|+||+|+.+.++.........++.. .+.++++.|+||++|..
T Consensus 174 ~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~g~~ 252 (422)
T 3fvs_A 174 RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGM-WERTLTIGSAGKTFSAT 252 (422)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTT-GGGEEEEEEHHHHHTCG
T ss_pred CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccc-cCcEEEEecchhccCCc
Confidence 4678888899999999996 8899999999999999999998655432211111122211 24468899999999865
Q ss_pred c---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH-------hh-CcHHHHHHHHHHHHHHHHhhccccc
Q psy15447 294 G---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL-------KA-NPSLLTKLREKCNTMHSLLSQHKVT 362 (457)
Q Consensus 294 g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~-------~~-~~~~~~~l~~~~~~l~~~L~~~~~~ 362 (457)
| ||+++++++++.+........+ +.+++.++++.++++.. ++ .++++++++++.+++.+.|++
T Consensus 253 G~r~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~---- 326 (422)
T 3fvs_A 253 GWKVGWVLGPDHIMKHLRTVHQNSVF--HCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQS---- 326 (422)
T ss_dssp GGCCEEEECCHHHHHHHHHHHHTTTC--CCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHT----
T ss_pred cceEEEEEeCHHHHHHHHHHHhhccC--CCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 5 9999999998887654322223 34788888888887641 11 135678888999999999998
Q ss_pred CCeEEeccCCCCeEEEEecCCcch-H-----HHHHHHHHHHHHHHH-cCeeEeccccCcc--ccCCCCCeEEEEecCCCC
Q psy15447 363 QRFLVQGHRDTPLKYLYLQKSDDE-V-----ASKKLLQTICDMCIQ-AGFAITCPSHLDQ--EAKKQKPSIRITCNISHT 433 (457)
Q Consensus 363 ~~~~~~~~~~~~~~~i~~~~~~~~-~-----~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~--~~~~~~~~lRi~~~~~~t 433 (457)
.|+.+..+..+.++++.+...... . .......++++.+++ +||++.++..+.. ..+...+++||+++. |
T Consensus 327 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~--~ 404 (422)
T 3fvs_A 327 VGLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVK--D 404 (422)
T ss_dssp TTCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCC--C
T ss_pred cCCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecC--C
Confidence 588776666778888776431000 0 000013467777655 6999988764321 001346899999875 9
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy15447 434 EQDMNSLIETLCKSHDI 450 (457)
Q Consensus 434 ~edi~~~~~~l~~~~~~ 450 (457)
++++++++++|++++++
T Consensus 405 ~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 405 EATLQAMDEKLRKWKVE 421 (422)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999998764
No 89
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=3.4e-31 Score=260.32 Aligned_cols=328 Identities=11% Similarity=0.101 Sum_probs=241.0
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC---CCcEEEecccHHHHHHHH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG---LEETALYSFGFSTSASAI 157 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~ai 157 (457)
.+.++..++++.+..++. +++.+++...... |+......+|++.++++++ .+.++++++|++|+..++
T Consensus 28 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-------y~~~~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~ 98 (375)
T 3op7_A 28 SISSLTLEELFALSGTNP--EDFYKKLQGTKLN-------YGWIEGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVL 98 (375)
T ss_dssp SCCCCCHHHHHHHHTCCH--HHHHHHHHTSCCS-------SCCTTCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHH
T ss_pred CCCCccHHHHHhhcccch--HHHHHHHhcCCcC-------CCCCCChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHH
Confidence 333444444444443332 5666666552222 2233335789999999863 467888999999999999
Q ss_pred HhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447 158 AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS 230 (457)
Q Consensus 158 ~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~ 230 (457)
.+++++||.|++..+.|..+...+...|.++..++.+ |++++++.++. ++++|++++++||+
T Consensus 99 ~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-----------~~~~v~~~~~~npt 167 (375)
T 3op7_A 99 YSLIEPGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRP-----------TTKMICINNANNPT 167 (375)
T ss_dssp HHHCCTTCEEEEEESSCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT-----------TCCEEEEESSCTTT
T ss_pred HHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCCCCCCHHHHHHhhcc-----------CCeEEEEcCCCCCC
Confidence 9999999999999999999988999999988877643 88899888742 45688889999999
Q ss_pred CCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHH
Q psy15447 231 ADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYII 304 (457)
Q Consensus 231 G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~ 304 (457)
|.+.| +++|+++|++||+++|+||+|+.+..+. .....+.+ +.+++++|+||++|.+| |+++++++++
T Consensus 168 G~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~-~~~~~~~~-----~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~ 241 (375)
T 3op7_A 168 GAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELD-VPSIIEVY-----DKGIAVNSLSKTYSLPGIRIGWVAANHQVT 241 (375)
T ss_dssp CCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSC-CCCHHHHC-----TTEEEEEESSSSSSCGGGCCEEEECCHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccC-CCchhhhc-----CCEEEEeEChhhcCCcccceEEEEeCHHHH
Confidence 99999 9999999999999999999998654431 11122222 23588899999997555 9999999999
Q ss_pred HHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCC
Q psy15447 305 EHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKS 383 (457)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~ 383 (457)
+.++.....+. .+.+++.++++.++++..++. +..+++++++.+++.+.|++ .+++.+..+..+...++.+...
T Consensus 242 ~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~~~~~~~~~~~~~~~~~~~ 316 (375)
T 3op7_A 242 DILRDYRDYTM--ICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEE---EPLVSYIRPAVVSTSFVKIAVD 316 (375)
T ss_dssp HHHTTTGGGTT--SCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH---CTTEEECCCSSSSCEEEEECCS
T ss_pred HHHHHHHhhhc--cCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhh---CCCceEecCCCeEEEeEEcCCC
Confidence 98865443333 334788888887777654332 34566778888999999987 4678776555666777777654
Q ss_pred cchHHHHHHHHHHHHHH-HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 384 DDEVASKKLLQTICDMC-IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 384 ~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
. ...++++.| .++||.+.++..+ ...+++|++++. +++++++++++|+++++++..
T Consensus 317 ~-------~~~~~~~~ll~~~gi~v~~g~~~-----~~~~~iRi~~~~--~~~~i~~~l~~l~~~l~~~~~ 373 (375)
T 3op7_A 317 M-------PMEDFCLQLLQEHGVLLVPGNRF-----ERDGYVRLGFAC--EQETLIKGLEKLSQFLRRFDK 373 (375)
T ss_dssp S-------CHHHHHHHHHHHHCEECEEGGGG-----TCTTEEEECCCS--CHHHHHHHHHHHHHHHGGGC-
T ss_pred C-------CHHHHHHHHHHhCCEEEeChhhh-----CCCCeEEEEecC--CHHHHHHHHHHHHHHHHHHhh
Confidence 3 345777887 4789999887643 236899999764 569999999999999887653
No 90
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=1.6e-30 Score=256.50 Aligned_cols=334 Identities=15% Similarity=0.139 Sum_probs=240.3
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----C-cEEEecccHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----E-ETALYSFGFSTSA 154 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~-~~i~~~sG~~a~~ 154 (457)
..+|||.++.+ +++.+|.+.+++.+++++ +.. .+....|..++.+++++.+.+.+|. + .++++++|++|+.
T Consensus 30 ~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~-~~~--~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~ 105 (386)
T 1u08_A 30 HQAINLSQGFP-DFDGPRYLQERLAHHVAQ-GAN--QYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALY 105 (386)
T ss_dssp TTCEECCCSSC-SSCCCHHHHHHHHHHHHT-TCC--SCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHH
T ss_pred CCeEEecCCCC-CCCCCHHHHHHHHHHHHh-hcc--CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHH
Confidence 35899988755 555689999999999876 211 1111223445555555555444563 4 6788888899999
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM 228 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~ 228 (457)
.++++++++||.|++..+.|..+...++..|.++..++. .|++++++.+. +++++|++++++|
T Consensus 106 ~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-----------~~~~~v~l~~p~n 174 (386)
T 1u08_A 106 AAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLS-----------ERTRLVILNTPHN 174 (386)
T ss_dssp HHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCC-----------TTEEEEEEESSCT
T ss_pred HHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhc-----------ccCEEEEEeCCCC
Confidence 999999999999999999999888888999998887765 47888888773 2457888889999
Q ss_pred CCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCC-CCCccEEEecCcccccCcc---cEEEecH
Q psy15447 229 NSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVS-TEEVDMIIGSLEHALGSVG---GFCVGSS 301 (457)
Q Consensus 229 ~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~-~~~~Di~~~s~sK~lg~~g---G~v~~~~ 301 (457)
|+|.+.| +++|+++|++||+++|+||+|+.+.++. ........+. ..+.|+++.|+||++|++| ||+++++
T Consensus 175 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 252 (386)
T 1u08_A 175 PSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQ--QGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPA 252 (386)
T ss_dssp TTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCS--SCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCH
T ss_pred CCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCC--CCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCH
Confidence 9999987 6899999999999999999998755532 2111111111 1235899999999998655 9999999
Q ss_pred HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447 302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL 380 (457)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~ 380 (457)
++++.++.......+ +.+++.++++.++++..++ .++++++++++.+++.+.|++ .|+.+..+..+.++++.+
T Consensus 253 ~~~~~l~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~~ 326 (386)
T 1u08_A 253 PISAEIRKVHQYLTF--SVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNE----SRLEILPCEGTYFLLVDY 326 (386)
T ss_dssp HHHHHHHHHHHHHTS--SCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTS----SSCEECCCCBSSEEEEEC
T ss_pred HHHHHHHHHHHhhcc--CCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH----CCCeecCCCceEEEEEec
Confidence 998887654322223 3467777777777765321 234678888999999999988 477776555567888887
Q ss_pred cCC--cchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 381 QKS--DDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 381 ~~~--~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
+.. . ...+++++|. ++||.+.++..+.. .+...+++|++++ .+++++++++++|++
T Consensus 327 ~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~f~~-~~~~~~~iRis~~--~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 327 SAVSTL-------DDVEFCQWLTQEHGVAAIPLSVFCA-DPFPHKLIRLCFA--KKESTLLAAAERLRQ 385 (386)
T ss_dssp TTTCCS-------CHHHHHHHHHHHSCEECEEGGGGCS-SCCCSCEEEEECC--SCHHHHHHHHHHHTT
T ss_pred CCCCCC-------CHHHHHHHHHHhCCEEEeCchHhCC-CCCCCCEEEEEEc--CCHHHHHHHHHHHhh
Confidence 643 2 2457888887 57999987653211 0123578999997 489999999998864
No 91
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=1.1e-30 Score=258.82 Aligned_cols=334 Identities=11% Similarity=0.054 Sum_probs=241.6
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCC-CCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVG-SCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTS 153 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~-~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~ 153 (457)
|+++|||++++ ..+..+|++.+++.+++++.+.. ..++....|..++..++++.+.+.+| .+.++++++|++|+
T Consensus 34 ~~~~i~l~~~~-~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al 112 (398)
T 3ele_A 34 KENVYDFSIGN-PSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASL 112 (398)
T ss_dssp GGGCEECCSCC-CCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHH
T ss_pred CCCeEEeecCC-CCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHH
Confidence 57899999874 35556899999999999873211 11122223456666667766666655 34677788889999
Q ss_pred HHHHHhhcCCC-CEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447 154 ASAIAAYVKRN-DAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV 226 (457)
Q Consensus 154 ~~ai~a~~~~g-d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v 226 (457)
..++.+++++| |.|++..++|..+...+...|.++..++.+ |++++++.+++ ++++|+++++
T Consensus 113 ~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-----------~~~~v~~~~p 181 (398)
T 3ele_A 113 SICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERINA-----------HTRGVIINSP 181 (398)
T ss_dssp HHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCT-----------TEEEEEECSS
T ss_pred HHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCc-----------CCCEEEEcCC
Confidence 99999999999 999999999999999999999999988765 78888877642 4577888899
Q ss_pred CCCCCCCCC---hHHHHHHHHH------cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---
Q psy15447 227 YMNSADICP---LKDILSLRSK------YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG--- 294 (457)
Q Consensus 227 ~~~~G~i~~---l~~i~~l~~~------~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g--- 294 (457)
+||+|.+.| +++|+++|++ ||+++|+||+|+.+.++. .......+. .+.+++++|+||++|.+|
T Consensus 182 ~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~ 257 (398)
T 3ele_A 182 NNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDG--IKVPFVTKY--YDNTLVCYSYSKSLSLPGERI 257 (398)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTT--CCCCCGGGT--CSSEEEEEESTTTSSCTTTCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCC--CCcCChHhh--cCCeEEEEehhhcCCCcccee
Confidence 999999999 6778899999 999999999998655432 111111111 234689999999998655
Q ss_pred cEEEecHHHHH------HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEe
Q psy15447 295 GFCVGSSYIIE------HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQ 368 (457)
Q Consensus 295 G~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~ 368 (457)
||+++++++++ .+...... ....+.+++.++++.+.++ .. ..+++++++.+++.+.|++ .++.+.
T Consensus 258 G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~---~~-~~~~~~~~~~~~l~~~L~~----~g~~~~ 328 (398)
T 3ele_A 258 GYVLVPDEVYDKAELYAAVCGAGRA-LGYVCAPSLFQKMIVKCQG---AT-GDINAYKENRDLLYEGLTR----IGYHCF 328 (398)
T ss_dssp EEEECCTTSTTHHHHHHHHHHHHHH-TTCCCSCHHHHHHHTTCTT---CC-CCHHHHHHHHHHHHHHHHH----HTCCEE
T ss_pred EEEEEcchhhhHHHHHHHHHHHhhh-ccccCCCHHHHHHHHHHhc---CH-HHHHHHHHHHHHHHHHHHH----cCCeec
Confidence 99998876432 22211111 1112345566555544432 22 2568889999999999988 466666
Q ss_pred ccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 369 GHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 369 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
.+..+.++++.++.. ...++.+.|.++||.+.++..+ ..++++||+++ ++++++++++++|++++
T Consensus 329 ~~~~~~~~~~~~~~~--------~~~~~~~~l~~~gi~v~~g~~~-----~~~~~iRis~~--~~~e~i~~~l~~l~~~l 393 (398)
T 3ele_A 329 KPDGAFYMFVKALED--------DSNAFCEKAKEEDVLIVAADGF-----GCPGWVRISYC--VDREMIKHSMPAFEKIY 393 (398)
T ss_dssp CCSBSSEEEEECSSS--------CHHHHHHHHHTTTEECEESGGG-----TCTTEEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred CCCeeEEEEEEcCCC--------CHHHHHHHHHHCCEEEeCcccc-----CCCCeEEEEec--CCHHHHHHHHHHHHHHH
Confidence 555566688877643 2457888899999999887653 23579999986 69999999999999998
Q ss_pred HHhc
Q psy15447 449 DIAV 452 (457)
Q Consensus 449 ~~~~ 452 (457)
++++
T Consensus 394 ~~~~ 397 (398)
T 3ele_A 394 KKYN 397 (398)
T ss_dssp HHHC
T ss_pred HHhh
Confidence 8764
No 92
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=1.5e-30 Score=259.49 Aligned_cols=340 Identities=13% Similarity=0.093 Sum_probs=241.0
Q ss_pred eeeEEeecCCc---cCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC--------------CCc
Q psy15447 80 IPCINFATHNY---LSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG--------------LEE 142 (457)
Q Consensus 80 ~~~id~~s~~~---l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------------~~~ 142 (457)
++++||.++++ ..+..+|.+.+++.+++++.... + |+......++++.++++++ .+.
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~--~----y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~ 106 (416)
T 1bw0_A 33 KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECN--G----YFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDN 106 (416)
T ss_dssp SCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSS--S----CCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGG
T ss_pred CCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccC--C----cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcce
Confidence 56899988764 35667899999999999763211 1 1122223556666666655 456
Q ss_pred EEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCC
Q psy15447 143 TALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSK 215 (457)
Q Consensus 143 ~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~ 215 (457)
++++++|++|+..++.+++++||.|++..+.|..+...++..|.++..++. .|++++++.+++
T Consensus 107 v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~---------- 176 (416)
T 1bw0_A 107 VVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDD---------- 176 (416)
T ss_dssp EEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT----------
T ss_pred EEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhcc----------
Confidence 788888899999999999999999999999999888888889988877653 378888887742
Q ss_pred CccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCC--ccccccCCCCCCccEEEecCcccc
Q psy15447 216 VTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGH--GVTEYFGVSTEEVDMIIGSLEHAL 290 (457)
Q Consensus 216 ~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~--~~~~~~~~~~~~~Di~~~s~sK~l 290 (457)
+++++++.+++||+|.+.| +++|+++|++||+++|+||+|+...++.... .......+.++..+++++|+||++
T Consensus 177 -~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 255 (416)
T 1bw0_A 177 -KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNL 255 (416)
T ss_dssp -TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTT
T ss_pred -CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhC
Confidence 3456777778999999999 8999999999999999999998754432100 122222233333368889999998
Q ss_pred cCcc---cEEEecHH--HHHHHHhhCCcc-eecCCCcHHHHHHHHHHHHHH--hhCcHHHHHHHHHHHHHHHHhhccccc
Q psy15447 291 GSVG---GFCVGSSY--IIEHHRLSGSGY-CFSASLPPFLAVAANKALHLL--KANPSLLTKLREKCNTMHSLLSQHKVT 362 (457)
Q Consensus 291 g~~g---G~v~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~aaa~a~l~~~--~~~~~~~~~l~~~~~~l~~~L~~~~~~ 362 (457)
+.+| ||+++++. +++.+......+ ..+.+.+++.++++.++++.. +..++.+++++++.+++.+.|++ .
T Consensus 256 ~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~ 332 (416)
T 1bw0_A 256 VVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGE---C 332 (416)
T ss_dssp SCGGGCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTT---S
T ss_pred CCCCceEEEEEeeCchhhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHh---C
Confidence 6554 89887653 433332110001 122345788888888887642 11235678888999999999988 4
Q ss_pred CCeEEeccCCCCeEEEEecCC-----cchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHH
Q psy15447 363 QRFLVQGHRDTPLKYLYLQKS-----DDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQD 436 (457)
Q Consensus 363 ~~~~~~~~~~~~~~~i~~~~~-----~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ed 436 (457)
+++.+..+..+.++++.++.. . ...++++.|+ ++||.+.++..+ ..++++|+++. +++++
T Consensus 333 ~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~f-----~~~~~iRis~~--~~~e~ 398 (416)
T 1bw0_A 333 IGLAPTMPRGAMYLMSRIDLEKYRDIK-------TDVEFFEKLLEEENVQVLPGTIF-----HAPGFTRLTTT--RPVEV 398 (416)
T ss_dssp TTEEECCCCBTTEEEEEECGGGBSSCC-------SHHHHHHHHHHHHCEECEEGGGG-----TCTTEEEEECC--SCHHH
T ss_pred CCCcccCCCeeEEEEEeCCHHHcCCCC-------CHHHHHHHHHHHCCEEEeccccc-----CCCCeEEEEec--CCHHH
Confidence 588776555577888777531 1 2456888875 789999887643 23579999995 68999
Q ss_pred HHHHHHHHHHHHHHhcC
Q psy15447 437 MNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 437 i~~~~~~l~~~~~~~~~ 453 (457)
++++++.|++++++...
T Consensus 399 l~~~l~~l~~~l~~~~~ 415 (416)
T 1bw0_A 399 YREAVERIKAFCQRHAA 415 (416)
T ss_dssp HHHHHHHHHHHHHHHBC
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 99999999999887653
No 93
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=2.7e-30 Score=252.92 Aligned_cols=328 Identities=11% Similarity=0.045 Sum_probs=238.7
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSAS 155 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ 155 (457)
+|++++||+++.. .++.+|++.+++.+++++.. .+ +. ....++++++++++|.+ .++++++|++++..
T Consensus 22 ~~~~~idl~~~~~-~~~~~~~v~~a~~~~~~~~~-~y-------~~-~~~~~l~~~la~~~~~~~~~v~~~~g~~~al~~ 91 (364)
T 1lc5_A 22 SPDQLLDFSANIN-PLGMPVSVKRALIDNLDCIE-RY-------PD-ADYFHLHQALARHHQVPASWILAGNGETESIFT 91 (364)
T ss_dssp CGGGSEECSSCCC-TTCCCHHHHHHHHHTGGGGG-SC-------CC-TTCHHHHHHHHHHHTSCGGGEEEESSHHHHHHH
T ss_pred CccceEEeccccC-CCCCCHHHHHHHHHHHHHhh-cC-------CC-CCHHHHHHHHHHHHCcCHHHEEECCCHHHHHHH
Confidence 6789999988753 45568999999999886521 11 11 12478999999999864 56777788899999
Q ss_pred HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHH---HHHHHHhhchhcccCCCCccEEEEEecCCCCCCC
Q psy15447 156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQH---LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD 232 (457)
Q Consensus 156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~---le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~ 232 (457)
++.++ +||.|++..+.|..+...++..|.++..++.++.+. +++.++... +++++|++++++||+|.
T Consensus 92 ~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~--------~~~~~v~i~~p~nptG~ 161 (364)
T 1lc5_A 92 VASGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALT--------PDLDCLFLCTPNNPTGL 161 (364)
T ss_dssp HHHHH--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCTTHHHHCC--------TTCCEEEEESSCTTTCC
T ss_pred HHHHc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccchhHHHHHhcc--------CCCCEEEEeCCCCCCCC
Confidence 99988 679999999999888888888999988887642111 233343322 23466777778999999
Q ss_pred CCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEE-ecHHHHH
Q psy15447 233 ICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCV-GSSYIIE 305 (457)
Q Consensus 233 i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~-~~~~~~~ 305 (457)
+.| +++|+++|++||+++|+||+|+.+.++ +.......+. .+.|+++.|+||++|.+| ||++ +++++++
T Consensus 162 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 237 (364)
T 1lc5_A 162 LPERPLLQAIADRCKSLNINLILDEAFIDFIPH--ETGFIPALKD--NPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMA 237 (364)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTT--CCCSGGGCTT--CTTEEEEEESTTTTTCTTTCCEEEECCCHHHHH
T ss_pred CCCHHHHHHHHHHhhhcCcEEEEECcChhhccC--ccchhhHhcc--CCCEEEEEECchhhcCCccceEEEEECCHHHHH
Confidence 999 899999999999999999999865543 2333332222 234789999999998555 9998 9999998
Q ss_pred HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc
Q psy15447 306 HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD 385 (457)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 385 (457)
.++..... .+.+++.++++.++++..+..++.+++++++.+++.+.|++ .+++.+. ++.++++++.++.+
T Consensus 238 ~l~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~-~~~g~~~~~~~~~~-- 307 (364)
T 1lc5_A 238 RMRRQQMP----WSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQ---LPLLTVY-PGRANYLLLRCERE-- 307 (364)
T ss_dssp HHHHHSCT----TCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHT---STTEEEC-CCSSSEEEEEESCT--
T ss_pred HHHHhCCC----CCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhc---CCCCEEC-CCCCeEEEEECCCc--
Confidence 88765432 24588888888777754222234667788889999999987 4588775 45677888877542
Q ss_pred hHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 386 EVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 386 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
..++.+.|.++||.+.++..+. ....+++|+++. +++|+++++++|+++++++.
T Consensus 308 -------~~~l~~~l~~~gi~v~~g~~~~---~~~~~~iRis~~---~~~~~~~l~~~l~~~~~~~~ 361 (364)
T 1lc5_A 308 -------DIDLQRRLLTQRILIRSCANYP---GLDSRYYRVAIR---SAAQNERLLAALRNVLTGIA 361 (364)
T ss_dssp -------TCCHHHHHHTTTEECEECTTST---TCCTTEEEEECC---CHHHHHHHHHHHHHHC----
T ss_pred -------HHHHHHHHHHCCcEEeeCcccC---CCCCCEEEEEeC---CHHHHHHHHHHHHHHhhccc
Confidence 1258888999999998865321 123579999975 69999999999999887664
No 94
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=7.5e-31 Score=257.89 Aligned_cols=333 Identities=11% Similarity=-0.005 Sum_probs=240.1
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGFSTS 153 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~ 153 (457)
+| ++|||+++.. .+..+|.+.+++.+++.... .+....|..++..++++.+.+.+|. +.++++++|++++
T Consensus 22 ~g-~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~----~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al 95 (376)
T 3ezs_A 22 KK-RGLDLGIGEP-QFETPKFIQDALKNHTHSLN----IYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVL 95 (376)
T ss_dssp SS-CCCBCSSCCC-CSCCCHHHHHHHHTTGGGGG----SCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHH
T ss_pred cC-CEEEeCCCCC-CCCCCHHHHHHHHHhhhhcC----CCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHH
Confidence 57 8999988753 44567999999988874321 1222234556666666666666564 4678888999999
Q ss_pred HHHHHhhcCC--CCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHH----HHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447 154 ASAIAAYVKR--NDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQ----HLEELLRQQDERDTLNSKVTKKFIIVEGVY 227 (457)
Q Consensus 154 ~~ai~a~~~~--gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~----~le~~l~~~~~~~~~~~~~~~~~vi~e~v~ 227 (457)
..++++++++ ||.|++..++|..+...+...|.++..++.++.+ ++++.+.+ ++++|++++++
T Consensus 96 ~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~-----------~~~~v~~~~p~ 164 (376)
T 3ezs_A 96 FNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTPSLNEKELQ-----------EVDLVILNSPN 164 (376)
T ss_dssp HHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCCCCCHHHHH-----------HCSEEEECSSC
T ss_pred HHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcchhHHhhhcc-----------CCCEEEEcCCC
Confidence 9999999999 9999999999999999999999999988865332 45555543 23577777889
Q ss_pred CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccC---CCCCCccEEEecCcccccCcc---cEEE
Q psy15447 228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFG---VSTEEVDMIIGSLEHALGSVG---GFCV 298 (457)
Q Consensus 228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~---~~~~~~Di~~~s~sK~lg~~g---G~v~ 298 (457)
||+|.+.| +++|+++|++||+++|+||+|+.+.++.....+....+ ....+.++++.|+||++|..| ||++
T Consensus 165 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~ 244 (376)
T 3ezs_A 165 NPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIA 244 (376)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEE
T ss_pred CCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEe
Confidence 99999988 66888889999999999999987655432222222110 001244788999999997655 9999
Q ss_pred ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE
Q psy15447 299 GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL 378 (457)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i 378 (457)
+++++++.+........+ +.+++.++++.++++..+..++.+++++++.+++.+.|+ ++. .+..+.++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~------~~~--~~~~~~~~~~ 314 (376)
T 3ezs_A 245 GDSRLLEKYKAFRAYLGY--TSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK------NTL--IYPYSFYVYL 314 (376)
T ss_dssp ECHHHHHHHHHHHTTTCC--CCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST------TCC--CCSBSSEEEE
T ss_pred eCHHHHHHHHHHHhhhcC--CCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc------CCC--CCCcceEEEE
Confidence 999999888765433333 458888888888876432224466777777888877765 332 3456778888
Q ss_pred EecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 379 YLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
.+++ ..++++.|++ +||++.++..+... ....+++||+++. |++|+++++++|++++++
T Consensus 315 ~~~~----------~~~~~~~l~~~~gi~v~~g~~~~~~-~~~~~~iRis~~~--~~~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 315 PVQN----------GENFAKTLYQNEGIITLPALYLGRN-RIGADYVRLALVY--DTPLLEKPLEIIETYREN 374 (376)
T ss_dssp ECSC----------HHHHHHHHHHHHCCBCEEGGGGCST-TTTTTEEEEECCS--CHHHHHHHHHHHHHHHCC
T ss_pred ECCC----------HHHHHHHHHHhCCEEEeCcHHhCCC-CCCCCeEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 7762 2468888888 89999887654310 1246899999874 999999999999988753
No 95
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.98 E-value=2e-30 Score=258.07 Aligned_cols=339 Identities=15% Similarity=0.115 Sum_probs=240.4
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----C-cEEEecccHHHHHH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----E-ETALYSFGFSTSAS 155 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~-~~i~~~sG~~a~~~ 155 (457)
.+|||.++.+ +++.+|.+.+++.+++++. . ..+....|..++.+++++.+.+.+|. + .++++++|++|+..
T Consensus 26 ~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~-~--~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~ 101 (411)
T 2o0r_A 26 GAVNLGQGFP-DEDGPPKMLQAAQDAIAGG-V--NQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAA 101 (411)
T ss_dssp TCEESSCSSC-SSCCCHHHHHHHHHHHHTT-C--CSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHH
T ss_pred CeeeccCcCC-CCCCCHHHHHHHHHHHhcC-C--CCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHH
Confidence 4789987654 4556899999999999762 1 11211223444555555555444463 3 67888888999999
Q ss_pred HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447 156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY 227 (457)
Q Consensus 156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~ 227 (457)
++.+++++||.|++..+.|.++...+...|.++..++. .|++++++.+++ ++++|++++++
T Consensus 102 ~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~-----------~~~~v~l~~~~ 170 (411)
T 2o0r_A 102 AVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTP-----------RTRALIINSPH 170 (411)
T ss_dssp HHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCT-----------TEEEEEEESSC
T ss_pred HHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhcc-----------CceEEEEeCCC
Confidence 99999999999999999998888888889988877764 478888887742 45778888999
Q ss_pred CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCC-CCCccEEEecCcccccCcc---cEEEec
Q psy15447 228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVS-TEEVDMIIGSLEHALGSVG---GFCVGS 300 (457)
Q Consensus 228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~-~~~~Di~~~s~sK~lg~~g---G~v~~~ 300 (457)
||+|.+.| +++|+++|++||+++|+||+|+.+.++ |........+. ..+.|+++.|+||++|.+| |+++++
T Consensus 171 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 248 (411)
T 2o0r_A 171 NPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFD--HARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGP 248 (411)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCT--TCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECC
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccC--CCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeC
Confidence 99999988 589999999999999999999876553 22111111221 1356899999999998555 999999
Q ss_pred HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEE
Q psy15447 301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLY 379 (457)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~ 379 (457)
+++++.+........++ .+++.++++.++++..++ .++++++++++.+++.+.|++ .|+.+..+..+.++++.
T Consensus 249 ~~~~~~l~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~ 322 (411)
T 2o0r_A 249 AELIAGVRAAKQYLSYV--GGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTE----IGFAVHDSYGTYFLCAD 322 (411)
T ss_dssp HHHHHHHHHHHHHHTSC--CCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH----HTCEECCCCBSSEEEEE
T ss_pred HHHHHHHHHHHhhccCC--CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH----cCCEecCCCeeEEEEEe
Confidence 99888876543222233 355556666677764322 235678888999999999988 47777644456678888
Q ss_pred ecCC--cchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCC----------CCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 380 LQKS--DDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKK----------QKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 380 ~~~~--~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~----------~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
+... . ...++.++|+ ++||.+.++..+.. .. ..+++||+++ .+++++++++++|++
T Consensus 323 ~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~f~~--~~~~~~~~~~~~~~~~iRis~~--~~~e~i~~~~~~l~~ 391 (411)
T 2o0r_A 323 PRPLGYD-------DSTEFCAALPEKVGVAAIPMSAFCD--PAAGQASQQADVWNHLVRFTFC--KRDDTLDEAIRRLSV 391 (411)
T ss_dssp CGGGTCC-------CHHHHHHHHHHHHSEECEEGGGGSC--CC--------CCGGGCEEEECC--SCHHHHHHHHHHHGG
T ss_pred cCCCCCC-------CHHHHHHHHHHhCCEEEcChhhhCC--CccccccccccCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 7641 1 2457888877 57999987654311 11 2478999986 489999999999998
Q ss_pred HHHHhcC
Q psy15447 447 SHDIAVQ 453 (457)
Q Consensus 447 ~~~~~~~ 453 (457)
++++...
T Consensus 392 ~~~~~~~ 398 (411)
T 2o0r_A 392 LAERPAT 398 (411)
T ss_dssp GGC----
T ss_pred HHhccCc
Confidence 7765543
No 96
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.98 E-value=4.2e-30 Score=253.59 Aligned_cols=332 Identities=13% Similarity=0.097 Sum_probs=240.3
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccHHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGFSTSA 154 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~~ 154 (457)
|+.++||+.+.+ .+..++.+.+++.+.++.... .+....|..++..++++.+.+..|. +.++++++|++|+.
T Consensus 30 ~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~---~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~ 105 (385)
T 1b5p_A 30 GVDLVALTAGEP-DFDTPEHVKEAARRALAQGKT---KYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALF 105 (385)
T ss_dssp TCCCEECCCSSC-SSCCCHHHHHHHHHHHHTTCC---SCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHH
T ss_pred CCCEEEecCCCC-CCCCCHHHHHHHHHHHhcCCC---CCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHH
Confidence 567899988765 455568899999988865211 1222234555666666666554452 46778888899999
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY 227 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~ 227 (457)
.++.+++++||.|++..++|..+...++..|.++..++.+ |++++++.+.+ ++++|++.+++
T Consensus 106 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-----------~~~~v~~~~p~ 174 (385)
T 1b5p_A 106 NLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITP-----------RTKALVVNSPN 174 (385)
T ss_dssp HHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCT-----------TEEEEEEESSC
T ss_pred HHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCC-----------CCEEEEEeCCC
Confidence 9999999999999999999999988889999998887752 56777766532 35677788899
Q ss_pred CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecH
Q psy15447 228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSS 301 (457)
Q Consensus 228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~ 301 (457)
||+|.+.| +++|.++|++||+++|+||+|+.+.++. . ......+.+ +.+++++||||.+|.+| ||+++++
T Consensus 175 NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~-~~~~~~~~~-~~~i~~~s~SK~~~~~G~RiG~~~~~~ 250 (385)
T 1b5p_A 175 NPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG--E-HFSPGRVAP-EHTLTVNGAAKAFAMTGWRIGYACGPK 250 (385)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS--C-CCCGGGTCT-TTEEEEEESTTTTTCGGGCCEEEECCH
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC--C-CCCHHHcCC-CCEEEEEechhhcCCcccceEEEEeCH
Confidence 99999988 8899999999999999999998765532 1 111122333 45799999999998655 9999999
Q ss_pred HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH----HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEE
Q psy15447 302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHL----LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKY 377 (457)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~----~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 377 (457)
++++.+....... +.+.+++...++.++++. .+..++.+++++++.+++.+.|++ . |+.+..+..+.+++
T Consensus 251 ~~~~~l~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~-g~~~~~~~~~~~~~ 324 (385)
T 1b5p_A 251 EVIKAMASVSRQS--TTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTA---L-GLKAVRPSGAFYVL 324 (385)
T ss_dssp HHHHHHHHHHHTT--TCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H-TCCBCCCSBTTEEE
T ss_pred HHHHHHHHHHhhc--cCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHH---C-CCeecCCCeeEEEE
Confidence 9888876532222 223467777777777753 222245678888899999999988 3 66665444556677
Q ss_pred EEecC-CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 378 LYLQK-SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 378 i~~~~-~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
+.+.. .. ...++.+.|.++||.+.++..+ ...+++||++. +++++++++++.|+++++
T Consensus 325 ~~~~~~~~-------~~~~l~~~l~~~gv~v~~g~~f-----~~~~~iRis~~--~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 325 MDTSPIAP-------DEVRAAERLLEAGVAVVPGTDF-----AAFGHVRLSYA--TSEENLRKALERFARVLG 383 (385)
T ss_dssp EECTTTCS-------SHHHHHHHHHHTTEECEESGGG-----TCTTEEEEECC--SCHHHHHHHHHHGGGGC-
T ss_pred EecCCCCC-------CHHHHHHHHHHCCeEEeccccc-----CCCCeEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 66642 12 3457888999999999887543 12579999987 789999999999887654
No 97
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.98 E-value=9.2e-31 Score=263.41 Aligned_cols=346 Identities=14% Similarity=0.122 Sum_probs=245.3
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGFSTS 153 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~ 153 (457)
.|+++|||+.+.+ ++..++.+.+++.+++++.+.. .+....|..++..++++.+.+.+|. +.++++++|++|+
T Consensus 55 ~~~~~i~l~~g~~-~~~~~~~v~~a~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al 131 (447)
T 3b46_A 55 QGRELINLGQGFF-SYSPPQFAIKEAQKALDIPMVN--QYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGI 131 (447)
T ss_dssp TTSCCEECCCCSC-SSCCCHHHHHHHHHHTTSGGGG--SCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHH
T ss_pred cCCCeEEccCCCC-CCCCCHHHHHHHHHHHhCcCCC--CCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHH
Confidence 4678999988754 5567899999999998763221 1222234556666666666655563 4677888889999
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-----------------CCHHHHHHHHHhhchhcccCCCC
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-----------------NNMQHLEELLRQQDERDTLNSKV 216 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----------------~d~~~le~~l~~~~~~~~~~~~~ 216 (457)
..++++++++||.|++..++|..+...++..|.++..++. .|+++|++.+. +
T Consensus 132 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-----------~ 200 (447)
T 3b46_A 132 LSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAIT-----------S 200 (447)
T ss_dssp HHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCC-----------T
T ss_pred HHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhc-----------c
Confidence 9999999999999999999999888888999988776542 36777777663 2
Q ss_pred ccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccc-cCCCCCCccEEEecCcccccC
Q psy15447 217 TKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEY-FGVSTEEVDMIIGSLEHALGS 292 (457)
Q Consensus 217 ~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~-~~~~~~~~Di~~~s~sK~lg~ 292 (457)
++++|++++++||+|.+.+ +++|+++|++||+++|+||+|+.+.++.....+... .+ ..+.|++++|+||++|+
T Consensus 201 ~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~--~~~~~i~i~S~sK~~~~ 278 (447)
T 3b46_A 201 KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPE--IGQLTLTVGSAGKSFAA 278 (447)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHH--HHTTEEEEEEHHHHTTC
T ss_pred CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCC--CCCcEEEEecCchhcCC
Confidence 4578888899999999976 889999999999999999999876554211122111 01 12458999999999986
Q ss_pred cc---cEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh--h-CcHHHHHHHHHHHHHHHHhhcccccCCe
Q psy15447 293 VG---GFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK--A-NPSLLTKLREKCNTMHSLLSQHKVTQRF 365 (457)
Q Consensus 293 ~g---G~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~--~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~ 365 (457)
+| ||+++ ++++++.+........+ +.+++.++++.++|+... + .++++++++++.+++.+.|++ .|+
T Consensus 279 ~G~riG~~~~~~~~l~~~l~~~~~~~~~--~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~ 352 (447)
T 3b46_A 279 TGWRIGWVLSLNAELLSYAAKAHTRICF--ASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDE----LGL 352 (447)
T ss_dssp TTSCCEEEECSCHHHHHHHHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH----HTC
T ss_pred cchhhEEEEeCCHHHHHHHHHHHhhccC--CCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHH----CCC
Confidence 65 99999 99998887653322233 347777777778887642 2 245778889999999999988 467
Q ss_pred EEeccCCCCeEEEEecCCcch-H-------HHHHHHHHHHHHHH-HcCeeEeccccCcccc--CCCCCeEEEEecCCCCH
Q psy15447 366 LVQGHRDTPLKYLYLQKSDDE-V-------ASKKLLQTICDMCI-QAGFAITCPSHLDQEA--KKQKPSIRITCNISHTE 434 (457)
Q Consensus 366 ~~~~~~~~~~~~i~~~~~~~~-~-------~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~--~~~~~~lRi~~~~~~t~ 434 (457)
.+..+..+.++++.+...... . .......+++++|. ++||.+.++..+.... ....+++||+++. ++
T Consensus 353 ~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~--~~ 430 (447)
T 3b46_A 353 PYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCK--DD 430 (447)
T ss_dssp CEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCS--CH
T ss_pred eecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeC--CH
Confidence 666555677888887542000 0 00004457888887 5799998865321100 0125799999974 89
Q ss_pred HHHHHHHHHHHHH
Q psy15447 435 QDMNSLIETLCKS 447 (457)
Q Consensus 435 edi~~~~~~l~~~ 447 (457)
+++++++++|+++
T Consensus 431 e~l~~~~~~l~~~ 443 (447)
T 3b46_A 431 AYLENAVERLKLL 443 (447)
T ss_dssp HHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998763
No 98
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.98 E-value=4.9e-31 Score=264.25 Aligned_cols=338 Identities=13% Similarity=0.099 Sum_probs=237.4
Q ss_pred ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----CC--CcEEEecccH
Q psy15447 77 INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----GL--EETALYSFGF 150 (457)
Q Consensus 77 ~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~--~~~i~~~sG~ 150 (457)
.+|+++|||+++++. +..+|.+.+++.+++.+++...... .|+......+|++.+++++ +. +.++++++++
T Consensus 53 ~~~~~~i~l~~~~~~-~~~~~~v~~a~~~~~~~~~~~~~~~--~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~ 129 (432)
T 3ei9_A 53 YPDAQVISLGIGDTT-EPIPEVITSAMAKKAHELSTIEGYS--GYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAK 129 (432)
T ss_dssp CTTCCCEECSSCCCC-SCCCHHHHHHHHHHHHHTTSTTTCC--CCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHH
T ss_pred CCCCCeEEccCCCCC-CCCCHHHHHHHHHHHhcccccCCcc--CCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChH
Confidence 367899999998876 6778999999999999865422211 2233334567777777775 43 3445555555
Q ss_pred HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCCCHHHHHHHHHhhchhcccCCCCcc
Q psy15447 151 STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRC------------KVQYFKHNNMQHLEELLRQQDERDTLNSKVTK 218 (457)
Q Consensus 151 ~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~ 218 (457)
+++.. +.+++++||.|+++.+.|.++...++..+. ++..++.++.+.+...+++. +++
T Consensus 130 ~al~~-l~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~~~ 199 (432)
T 3ei9_A 130 CDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTV---------GRT 199 (432)
T ss_dssp HHHHH-HHHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGGC---------CCC
T ss_pred HHHHH-HHHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhhC---------CCC
Confidence 66654 677889999999999999999888877773 46666654322221112211 345
Q ss_pred EEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-
Q psy15447 219 KFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG- 294 (457)
Q Consensus 219 ~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g- 294 (457)
++|++++++||+|.+.+ +++|+++|++||+++|+||+|+.+.++..+..+....+. .+.+|+++|+||++|..|
T Consensus 200 ~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~G~ 277 (432)
T 3ei9_A 200 DIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGA--EEVAMETASFSNYAGFTGV 277 (432)
T ss_dssp SEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTG--GGTEEEEEESHHHHCTTTT
T ss_pred CEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCC--CCeEEEEecchhccCCccc
Confidence 67777789999999987 667888899999999999999876666443333333222 245799999999998777
Q ss_pred --cEEEecHHH--------HHHHHhhCCcceecCCCcHHHHHHHHHHHHH--HhhCcHHHHHHHHHHHHHHHHhhccccc
Q psy15447 295 --GFCVGSSYI--------IEHHRLSGSGYCFSASLPPFLAVAANKALHL--LKANPSLLTKLREKCNTMHSLLSQHKVT 362 (457)
Q Consensus 295 --G~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~--~~~~~~~~~~l~~~~~~l~~~L~~~~~~ 362 (457)
||+++++++ ++.+..... ..+ .+.++++++++.+++.. .+..++++++++++.+++.+.|++
T Consensus 278 r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~---- 351 (432)
T 3ei9_A 278 RLGWTVIPKKLLYSDGFPVAKDFNRIIC-TCF-NGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTS---- 351 (432)
T ss_dssp CCEEEECCTTCBCTTSCBHHHHHHHHHH-HSC-CCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHH----
T ss_pred ceEEEEEChHHhhcchHHHHHHHHHHhc-ccc-CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 999998877 565543221 112 23577777777777632 222345788899999999999988
Q ss_pred CCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHH
Q psy15447 363 QRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLI 441 (457)
Q Consensus 363 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~ 441 (457)
.|+.+..+..++++++.++.. ...++++.|+++ ||++.++..+. +.+.+++||++ ..+++++++++
T Consensus 352 ~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ll~~~gv~v~~g~~f~---~~~~~~iRis~--~~~~e~l~~~l 418 (432)
T 3ei9_A 352 LGYDVYGGKNAPYVWVHFPNQ--------SSWDVFAEILEKTHVVTTPGSGFG---PGGEGFVRVSA--FGHRENILEAC 418 (432)
T ss_dssp TTCCEEECSSSSEEEEECTTS--------CHHHHHHHHHHHHCEECEEGGGGC---GGGTTEEEEEC--CSCHHHHHHHH
T ss_pred CCceecCCCcceEEEEECCCC--------CHHHHHHHHHHHCCEEEeCchHhC---CCCCCEEEEEe--cCCHHHHHHHH
Confidence 477776555788888888732 345677777765 99998876542 22368999997 35999999999
Q ss_pred HHHHHHH
Q psy15447 442 ETLCKSH 448 (457)
Q Consensus 442 ~~l~~~~ 448 (457)
+.|++--
T Consensus 419 ~rl~~~~ 425 (432)
T 3ei9_A 419 RRFKQLY 425 (432)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998754
No 99
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.98 E-value=1.5e-31 Score=262.27 Aligned_cols=325 Identities=11% Similarity=0.108 Sum_probs=238.6
Q ss_pred CChhhHHHHHHHHHhcCC-CCC-CCCCcccChHHHHHHHHH-HHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeC
Q psy15447 95 ENPDIEKCAIDCIDKNGV-GSC-GPRGFYGTNVVHLDLEND-IASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDE 171 (457)
Q Consensus 95 ~~p~i~~a~~~~l~~~~~-~~~-~~~~~~g~~~~~~~l~~~-la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~ 171 (457)
.+|++.+++.+++..... .++ .+...++..+...++++. +++++|.+.++++++|++|+..++.+++++||.|++..
T Consensus 21 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 100 (371)
T 2e7j_A 21 LTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCDVARVTNGAREAKFAVMHSLAKKDAWVVMDE 100 (371)
T ss_dssp CCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSSEEEEESSHHHHHHHHHHHHCCTTCEEEEET
T ss_pred CCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHhCCCCEEEEcc
Confidence 468999999988876421 011 122234456778999999 99999988445555668999999999999999999999
Q ss_pred cccHHHHHHHHhcCCeEEEec--CC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHH
Q psy15447 172 NINFAIQTGLIASRCKVQYFK--HN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS 244 (457)
Q Consensus 172 ~~h~~~~~~~~~~g~~~~~~~--~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~ 244 (457)
+.|.+....++..|.++..++ .+ |++++++.+++... .+++++|++++++|++|.+.|+++|+++|+
T Consensus 101 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~------~~~~~~v~~~~~~nptG~~~~~~~i~~~~~ 174 (371)
T 2e7j_A 101 NCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKK------RGEVVLALITYPDGNYGNLPDVKKIAKVCS 174 (371)
T ss_dssp TCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTT------TSCEEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred CcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcc------cCCeEEEEEECCCCCCcccCCHHHHHHHHH
Confidence 999999999999999999888 65 89999999975421 035678999999999999999999999999
Q ss_pred HcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHH-HHhhCCccee-----
Q psy15447 245 KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEH-HRLSGSGYCF----- 316 (457)
Q Consensus 245 ~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~-~~~~~~~~~~----- 316 (457)
+||+++|+||+|+.|..+. . ...+ ++|++++|++|++++ ++|++++++++++. ++....++..
T Consensus 175 ~~~~~li~D~a~~~~~~~~---~-~~~~-----~~di~~~s~sK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (371)
T 2e7j_A 175 EYDVPLLVNGAYAIGRMPV---S-LKEI-----GADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKNKEVELL 245 (371)
T ss_dssp TTTCCEEEECTTTBTTBCC---C-HHHH-----TCSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCSSCTTSBGGGT
T ss_pred HcCCeEEEECccccCCCCC---C-hhhc-----CCCEEEecCCcCCCCCCCcEEEEEechhhhhhccccccCcccccccc
Confidence 9999999999998765431 1 1112 247999999999864 34899999887776 5433322222
Q ss_pred cCCCcHHHHHHHHHHHHHHhhCcHHHHHH--HHHHHHHHHHhhcccccCCeEEeccC--CCCeEEEEecCCcchHHHHHH
Q psy15447 317 SASLPPFLAVAANKALHLLKANPSLLTKL--REKCNTMHSLLSQHKVTQRFLVQGHR--DTPLKYLYLQKSDDEVASKKL 392 (457)
Q Consensus 317 ~~~~~~~~~aaa~a~l~~~~~~~~~~~~l--~~~~~~l~~~L~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~ 392 (457)
+++.++..++++.++++.+.. +..+++ +++++++.+.|++ . ++.+..+. .++++++.++ .
T Consensus 246 ~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~---~-~~~~~~~~~~~~~~~~~~~~----------~ 309 (371)
T 2e7j_A 246 GCTARGATIITLMASFPHVRE--RIKRWDEEVEKARRFAAEMEK---L-GIKQLGDNPHNHDLMFFHAE----------V 309 (371)
T ss_dssp TCCCCSHHHHHHHHHHHHHHH--HGGGHHHHHHHHHHHHHHHHH---T-TCEEESSSSCCSSEEEEECH----------H
T ss_pred cCCcCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH---c-CcEEecCCCccCceEEEECC----------C
Confidence 445677777777788887765 466788 8999999999988 3 77776443 4778888765 1
Q ss_pred HHHHHHHHHHcCeeEeccccCccc-cCCCCCeEE-EEecCC-CCHHHHHHHHHHHHHHHHHh
Q psy15447 393 LQTICDMCIQAGFAITCPSHLDQE-AKKQKPSIR-ITCNIS-HTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 393 ~~~~~~~l~~~Gi~v~~~~~~~~~-~~~~~~~lR-i~~~~~-~t~edi~~~~~~l~~~~~~~ 451 (457)
..++.+.|.++||.+.+ ..+... ....++.+| ++++.. +|++|+++++++|+++++++
T Consensus 310 ~~~~~~~l~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 310 LYEISKKAKGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp HHHHHHHSSSGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHhc
Confidence 34688888888999876 321100 001157899 999987 89999999999999988754
No 100
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.98 E-value=1.9e-30 Score=257.61 Aligned_cols=332 Identities=11% Similarity=0.054 Sum_probs=242.7
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCccc--ChHHHHHHHHHHHhhcCCC--cEEEecccHHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYG--TNVVHLDLENDIASFMGLE--ETALYSFGFSTSA 154 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g--~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~ 154 (457)
+..|+|+.++. ..+|++.+++.+++.++...+. ....++ ..+...++++.+++++|.+ .++++++|++++.
T Consensus 26 ~~~~ld~~~~~----~~~~~v~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~ 100 (406)
T 3cai_A 26 GWVHFDAPAGM----LIPDSVATTVSTAFRRSGASTV-GAHPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLS 100 (406)
T ss_dssp SCEECBGGGCC----CCCHHHHHHHHHHHHHCCSSSC-SSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHH
T ss_pred CeEEEeCCCcC----CCCHHHHHHHHHHHHhcCCCCC-CccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHH
Confidence 35677776653 3478999999999987532221 111121 3567889999999999975 5677778888999
Q ss_pred HHHHhh---cCCCCEEEEeCcccHHHHHHHHh----cCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447 155 SAIAAY---VKRNDAVFVDENINFAIQTGLIA----SRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFI 221 (457)
Q Consensus 155 ~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~----~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~v 221 (457)
.++.++ .++||.|++..+.|.+....+.. .|.++..++.+ |++++++.++ +++++|
T Consensus 101 ~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~-----------~~~~~v 169 (406)
T 3cai_A 101 LLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLIS-----------KSTRLV 169 (406)
T ss_dssp HHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCC-----------TTEEEE
T ss_pred HHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhC-----------CCceEE
Confidence 888877 78999999999998876555443 58888888765 7888888774 246789
Q ss_pred EEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCccc-EEEec
Q psy15447 222 IVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGG-FCVGS 300 (457)
Q Consensus 222 i~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG-~v~~~ 300 (457)
++++++|++|.+.|+++|.++|++||+++|+||+|+.|.... . ...+ ++|+++.|++|.+|+.+| +++++
T Consensus 170 ~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~---~-~~~~-----~~d~~~~s~~K~~g~~~G~~~~~~ 240 (406)
T 3cai_A 170 AVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLL---D-IRET-----DADVVTVNAHAWGGPPIGAMVFRD 240 (406)
T ss_dssp EEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCC---C-HHHH-----CCSEEEEEGGGGTSCSCEEEEESC
T ss_pred EEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCC---C-chhc-----CCCEEEeehhhhcCCCcCeEEEEe
Confidence 999999999999999999999999999999999998654321 1 1112 348999999999886678 99999
Q ss_pred HHHHHHHHhhCCcc------ee-cCCCcHHHHHHHHHHHHHHhh----------------CcHHHHHHHHHHHHHHHHhh
Q psy15447 301 SYIIEHHRLSGSGY------CF-SASLPPFLAVAANKALHLLKA----------------NPSLLTKLREKCNTMHSLLS 357 (457)
Q Consensus 301 ~~~~~~~~~~~~~~------~~-~~~~~~~~~aaa~a~l~~~~~----------------~~~~~~~l~~~~~~l~~~L~ 357 (457)
+++++.++.....+ .+ .++.++..++++.++++.+.+ .++++++++++++++.+.|+
T Consensus 241 ~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 320 (406)
T 3cai_A 241 PSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLR 320 (406)
T ss_dssp HHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 98877664322100 11 234577777777778877654 24567788899999999998
Q ss_pred cccccCCeEEeccC--CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc----ccCCCCCeEEEEecCC
Q psy15447 358 QHKVTQRFLVQGHR--DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ----EAKKQKPSIRITCNIS 431 (457)
Q Consensus 358 ~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~----~~~~~~~~lRi~~~~~ 431 (457)
+ ++++.+..+. .++++++.+.. . ...++.+.|.++||.++++..+.. ..+...+++|++++..
T Consensus 321 ~---~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~ 389 (406)
T 3cai_A 321 S---LPLVMLIGRPEAQIPVVSFAVHK-V-------PADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHY 389 (406)
T ss_dssp T---CTTEEECCCCSSBCSEEEEEETT-B-------CHHHHHHHHHHTTEECEECCSCHHHHHHTTTTTTCCEEEECCTT
T ss_pred c---CCCeEEcCCccccCCEEEEEECC-c-------CHHHHHHHHHHCCcEEecCChHHHHHHcCCCCCCCeEEEEeecC
Confidence 8 5678775432 35677777753 2 345788899999999987541100 0011247899999999
Q ss_pred CCHHHHHHHHHHHHH
Q psy15447 432 HTEQDMNSLIETLCK 446 (457)
Q Consensus 432 ~t~edi~~~~~~l~~ 446 (457)
+|++|+++++++|++
T Consensus 390 ~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 390 STMAEVDQLVRALAS 404 (406)
T ss_dssp CCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999999999875
No 101
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.97 E-value=3.6e-30 Score=253.00 Aligned_cols=334 Identities=14% Similarity=0.121 Sum_probs=240.0
Q ss_pred eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCC-CCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHH
Q psy15447 82 CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSC-GPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIA 158 (457)
Q Consensus 82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~-~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~ 158 (457)
|+|++++. ..+|.+.+++.+++.+....+. .+...++..+...++++++++++|.+ .++++++|++|+..++.
T Consensus 3 yld~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~ 78 (382)
T 4hvk_A 3 YFDYTSAK----PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAII 78 (382)
T ss_dssp BCBTTTCC----CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHH
T ss_pred eecCCCcC----CCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHH
Confidence 55665532 2478999999999987322111 12122344677889999999999975 46777788899999999
Q ss_pred hhc----CCCCEEEEeCcccHHHHHHHHh---cCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447 159 AYV----KRNDAVFVDENINFAIQTGLIA---SRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV 226 (457)
Q Consensus 159 a~~----~~gd~v~~~~~~h~~~~~~~~~---~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v 226 (457)
++. ++||.|+++.+.|+++...+.. .|.++..++.+ |++++++.+++ ++++|+++++
T Consensus 79 ~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----------~~~~v~~~~~ 147 (382)
T 4hvk_A 79 GYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD-----------DTILVSVQHA 147 (382)
T ss_dssp HHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCT-----------TEEEEECCSB
T ss_pred HhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhcc-----------CceEEEEECC
Confidence 887 9999999999999988776554 58888888754 78999888743 4579999999
Q ss_pred CCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHH
Q psy15447 227 YMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIE 305 (457)
Q Consensus 227 ~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~ 305 (457)
+|++|.+.|+++|.++|++||+ +|+||+|++|.... +....++|+++.|++|.+|+.| |+++.+++.
T Consensus 148 ~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~---------~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~-- 215 (382)
T 4hvk_A 148 NNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEV---------DVEKIGADMLTISSNDIYGPKGVGALWIRKEA-- 215 (382)
T ss_dssp CTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCC---------CHHHHTCSEEEEESGGGTSCTTCEEEEEETTC--
T ss_pred CCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCC---------CchhcCCCEEEEeHHHhcCCCceEEEEEcCcc--
Confidence 9999999999999999999999 99999998654321 1111134899999999887654 777776553
Q ss_pred HHHhhCCc----c-eecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC---CCeE
Q psy15447 306 HHRLSGSG----Y-CFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD---TPLK 376 (457)
Q Consensus 306 ~~~~~~~~----~-~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~---~~~~ 376 (457)
.++....+ . ...++.++..+++..++++.+.+. ++.+++++++.+++.+.|++ ++++.+..+.. ..++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~~~~~~~ 292 (382)
T 4hvk_A 216 KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLK---IEESYLNGHPEKRLPNNV 292 (382)
T ss_dssp CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---STTEEECSCSSSBCTTEE
T ss_pred CcCcccccCCCcCccccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc---CCCeEEeCCccccCCCEE
Confidence 11111100 0 113345777777777777765432 46788899999999999987 56887764332 3466
Q ss_pred EEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccC---------C-----CCCeEEEEecCCCCHHHHHHHHH
Q psy15447 377 YLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAK---------K-----QKPSIRITCNISHTEQDMNSLIE 442 (457)
Q Consensus 377 ~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~---------~-----~~~~lRi~~~~~~t~edi~~~~~ 442 (457)
.+.+... ...++.+.|.++||.++++.++..... . ..+++|++++..+|++|++++++
T Consensus 293 ~~~~~~~--------~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~ 364 (382)
T 4hvk_A 293 NVRFSYI--------EGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLE 364 (382)
T ss_dssp EEEETTC--------CHHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHH
T ss_pred EEEECCC--------CHHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHH
Confidence 6666543 345788999999999987654322000 0 04789999999999999999999
Q ss_pred HHHHHHHHhcC
Q psy15447 443 TLCKSHDIAVQ 453 (457)
Q Consensus 443 ~l~~~~~~~~~ 453 (457)
+|+++++++.+
T Consensus 365 ~l~~~~~~~~~ 375 (382)
T 4hvk_A 365 VLPGVIERLRS 375 (382)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999887653
No 102
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.97 E-value=2.1e-30 Score=253.30 Aligned_cols=324 Identities=13% Similarity=0.134 Sum_probs=237.0
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC----cEEEecccHHHHHHH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE----ETALYSFGFSTSASA 156 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~~a 156 (457)
+++||..+ +.. .+|++.+++.+++ +. ..+ ....+...++++++++++|.+ .++++++|++|+..+
T Consensus 4 ~~~~~~~g-p~~--~~~~v~~a~~~~~---~~--~~~---~~~~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~ 72 (366)
T 1m32_A 4 NYLLLTPG-PLT--TSRTVKEAMLFDS---CT--WDD---DYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAV 72 (366)
T ss_dssp -CEECSSS-SCC--CCHHHHHTTCCCC---CT--TSH---HHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHH
T ss_pred ccccccCC-CcC--CCHHHHHHHhhhh---cC--CCH---HHHHHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHH
Confidence 46777765 322 5788888887642 21 100 001256789999999999943 478888999999999
Q ss_pred HHhhcCCCCEEE-EeCcccHHH-HHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447 157 IAAYVKRNDAVF-VDENINFAI-QTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN 229 (457)
Q Consensus 157 i~a~~~~gd~v~-~~~~~h~~~-~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~ 229 (457)
+.+++++||.|+ .+.++|++. ...+...|.++..++. .|++++++.+++. .++++|++.+++||
T Consensus 73 ~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~---------~~~~~v~~~~~~np 143 (366)
T 1m32_A 73 LGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNAD---------PTISHIAMVHSETT 143 (366)
T ss_dssp HHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHC---------TTCCEEEEESEETT
T ss_pred HHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcC---------CCeEEEEEecccCC
Confidence 999999998655 556888763 4555667877776653 5899999998752 13467778888899
Q ss_pred CCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcc-cEEEecHHHHHHH
Q psy15447 230 SADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVG-GFCVGSSYIIEHH 307 (457)
Q Consensus 230 ~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~g-G~v~~~~~~~~~~ 307 (457)
+|.+.|+++|+++|++||+++|+||+|++|..+ .++...++|+++.|++|++ |+.| |++++++++++.+
T Consensus 144 tG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~---------~~~~~~~~di~~~s~~K~~~~~~g~G~~~~~~~~~~~~ 214 (366)
T 1m32_A 144 TGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIP---------MDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAAC 214 (366)
T ss_dssp TTEECCHHHHHHHHHHHTCEEEEECTTTTTTSC---------CCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHHTTC
T ss_pred cceecCHHHHHHHHHHcCCEEEEECCccccCcC---------ccccccCccEEEecCcccccCCCceEEEEECHHHHHhh
Confidence 999999999999999999999999999876432 1222224589999999988 5556 9999999887765
Q ss_pred HhhCCccee----------------cCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEe
Q psy15447 308 RLSGSGYCF----------------SASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQ 368 (457)
Q Consensus 308 ~~~~~~~~~----------------~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~ 368 (457)
+....++.+ ..+.++..++++.++++.+.+. ++++++++++.+++.+.|++ .++.+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~----~~~~~~ 290 (366)
T 1m32_A 215 KGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRA----LGFNTL 290 (366)
T ss_dssp TTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH----TTCCBS
T ss_pred cCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHH----CCCeec
Confidence 432111111 1356788888888888876542 45788999999999999988 366554
Q ss_pred cc---CCCCeEEEEecC--CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHH
Q psy15447 369 GH---RDTPLKYLYLQK--SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIET 443 (457)
Q Consensus 369 ~~---~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~ 443 (457)
.+ ..+.++++.++. .. ...++.+.|.++||.+.++..+ ..+++|++++..+|++|+++++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~gi~v~~~~~~------~~~~iRi~~~~~~~~~~i~~~~~~ 357 (366)
T 1m32_A 291 LDDELHSPIITAFYSPEDPQY-------RFSEFYRRLKEQGFVIYPGKVS------QSDCFRIGNIGEVYAADITALLTA 357 (366)
T ss_dssp SCGGGBCSSEEEEECCCCTTC-------CHHHHHHHHHHTTEECEECCCS------SSCEEEEECCSSCCHHHHHHHHHH
T ss_pred cCchhcCceEEEEEcCccCCC-------CHHHHHHHHHHCCEEEECCcCC------CCCEEEEecCCCCCHHHHHHHHHH
Confidence 33 134478887764 22 3467899999999999876532 357999999999999999999999
Q ss_pred HHHHHHH
Q psy15447 444 LCKSHDI 450 (457)
Q Consensus 444 l~~~~~~ 450 (457)
|++++++
T Consensus 358 l~~~~~~ 364 (366)
T 1m32_A 358 IRTAMYW 364 (366)
T ss_dssp HHHHCTT
T ss_pred HHHHHHh
Confidence 9987654
No 103
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.97 E-value=2.2e-30 Score=258.58 Aligned_cols=337 Identities=16% Similarity=0.147 Sum_probs=243.7
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHH--h-cCCCCC-CCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCID--K-NGVGSC-GPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTS 153 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~--~-~~~~~~-~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~ 153 (457)
.-|+|+.++. ..+|++.+++.+++. + ++.... .+...++..+...++++.+++++|.+ .++++++|++|+
T Consensus 23 ~iyld~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a~ 98 (423)
T 3lvm_A 23 PIYLDYSATT----PVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESD 98 (423)
T ss_dssp SEECBTTTCC----CCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHH
T ss_pred CEeecCCCcC----CCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHHHH
Confidence 4455555432 247899999998887 3 222111 12222345677889999999999976 788889999999
Q ss_pred HHHHHhhcC----CCCEEEEeCcccHHHHHHH---HhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447 154 ASAIAAYVK----RNDAVFVDENINFAIQTGL---IASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFI 221 (457)
Q Consensus 154 ~~ai~a~~~----~gd~v~~~~~~h~~~~~~~---~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~v 221 (457)
..+++++.+ +||.|++..+.|.++...+ ...|.++..++.+ |++++++.+++ ++++|
T Consensus 99 ~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----------~~~~v 167 (423)
T 3lvm_A 99 NLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRD-----------DTILV 167 (423)
T ss_dssp HHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCT-----------TEEEE
T ss_pred HHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCC-----------CcEEE
Confidence 999988773 7999999999999887766 4458898888765 78999888753 45799
Q ss_pred EEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEec
Q psy15447 222 IVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGS 300 (457)
Q Consensus 222 i~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~ 300 (457)
++++++|++|.+.|+++|+++|++||++||+||+|++|... .+....++|+++.|++|.+|+.| |+++++
T Consensus 168 ~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~---------~~~~~~~~di~~~s~sK~~g~~g~G~~~~~ 238 (423)
T 3lvm_A 168 SIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLP---------IDLSQLKVDLMSFSGHKIYGPKGIGALYVR 238 (423)
T ss_dssp ECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSC---------CCTTTSCCSEEEEESTTTTSCSSCEEEEEC
T ss_pred EEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCC---------cChhhcCCCEEEechHHhcCCCCeEEEEEe
Confidence 99999999999999999999999999999999999865432 11111245899999999887654 888888
Q ss_pred HHHHHHHHhhCCc-----ceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC--
Q psy15447 301 SYIIEHHRLSGSG-----YCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD-- 372 (457)
Q Consensus 301 ~~~~~~~~~~~~~-----~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~-- 372 (457)
++.++.+.....+ ....++.++..++++.++++.+.+. +++.++++++.+++.+.|++ ++++.+..+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~~ 315 (423)
T 3lvm_A 239 RKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKD---IEEVYLNGDLEHG 315 (423)
T ss_dssp BTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---STTEEEESCSTTB
T ss_pred ccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCEEEeCCcccc
Confidence 7655544322111 0123345777777777777766542 46788899999999999988 56888765433
Q ss_pred -CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccc----------cCC----CCCeEEEEecCCCCHHHH
Q psy15447 373 -TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQE----------AKK----QKPSIRITCNISHTEQDM 437 (457)
Q Consensus 373 -~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~----------~~~----~~~~lRi~~~~~~t~edi 437 (457)
..++.+.+... ...++.+.|.+ |.+.++.++... ... ..+.+|++++..+|++|+
T Consensus 316 ~~~~~~~~~~~~--------~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i 385 (423)
T 3lvm_A 316 APNILNVSFNYV--------EGESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEI 385 (423)
T ss_dssp CTTEEEEEETTS--------CHHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHH
T ss_pred CCCeEEEEeCCC--------CHHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHH
Confidence 35666666432 34567777766 777765432210 000 037899999999999999
Q ss_pred HHHHHHHHHHHHHhcC
Q psy15447 438 NSLIETLCKSHDIAVQ 453 (457)
Q Consensus 438 ~~~~~~l~~~~~~~~~ 453 (457)
++++++|+++++++++
T Consensus 386 ~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 386 DYTIELVRKSIGRLRD 401 (423)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhc
Confidence 9999999999987754
No 104
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.97 E-value=4.4e-30 Score=253.93 Aligned_cols=323 Identities=12% Similarity=0.095 Sum_probs=241.6
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC---cEEEecccHHHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE---ETALYSFGFSTSAS 155 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~ 155 (457)
++.|+|..+.. ..+|++.+++.+++.. .+ + ....+...++++.+++++|.+ .++++++|++|+..
T Consensus 33 ~~~~l~~~~~~----~~~~~v~~a~~~~~~~---~~--~---~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~ 100 (393)
T 1vjo_A 33 PSRLLLGPGPS----NAHPSVLQAMNVSPVG---HL--D---PAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEA 100 (393)
T ss_dssp CCCEECSSSCC----CCCHHHHHHHSSCCCC---TT--S---HHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHH
T ss_pred ccceeccCCCC----CCCHHHHHHHhccccc---cc--C---HHHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHH
Confidence 35566654421 2367888887766542 11 0 113577889999999999965 46777888999999
Q ss_pred HHHhhcCCCCEEEEeCcccHH--HHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447 156 AIAAYVKRNDAVFVDENINFA--IQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM 228 (457)
Q Consensus 156 ai~a~~~~gd~v~~~~~~h~~--~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~ 228 (457)
++.+++++||.|++..+.|.+ +...++..|.++..++. .|++++++.+++. ++++|++++++|
T Consensus 101 ~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~----------~~~~v~~~~~~n 170 (393)
T 1vjo_A 101 TIANAVEPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETH----------RPAILALVHAET 170 (393)
T ss_dssp HHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHH----------CCSEEEEESEET
T ss_pred HHHhccCCCCEEEEEcCChhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhC----------CceEEEEeccCC
Confidence 999999999999999999888 77778888998888773 5899999988641 346888999999
Q ss_pred CCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc--cEEEecHHHHHH
Q psy15447 229 NSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG--GFCVGSSYIIEH 306 (457)
Q Consensus 229 ~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g--G~v~~~~~~~~~ 306 (457)
++|.+.|+++|+++|++||+++|+||+|++|... ..+...++|+++.|++|++++++ |++++++++++.
T Consensus 171 ptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~---------~~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~~~~~~ 241 (393)
T 1vjo_A 171 STGARQPLEGVGELCREFGTLLLVDTVTSLGGVP---------IFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEK 241 (393)
T ss_dssp TTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSC---------CCTTTTTCSEEECCSSSTTCSCSSCEEEEECHHHHHH
T ss_pred CcceeccHHHHHHHHHHcCCEEEEECCccccCcC---------CcccccCccEEEEcCcccccCCCceEEEEECHHHHHH
Confidence 9999999999999999999999999999865321 11222355899999999996544 899999998887
Q ss_pred HHhh---CCcc--------------eecC-CCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeE
Q psy15447 307 HRLS---GSGY--------------CFSA-SLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFL 366 (457)
Q Consensus 307 ~~~~---~~~~--------------~~~~-~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~ 366 (457)
++.. ..++ .+.. +.++..++++.++++.+.+. ++++++++++.+++.+.|++ .|++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~ 317 (393)
T 1vjo_A 242 LQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLED----IGLS 317 (393)
T ss_dssp HHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCC
T ss_pred HhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHH----cCCc
Confidence 7532 0111 1222 56888888888888876432 46788999999999999988 3666
Q ss_pred EeccCC---CCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEe-cCCCCHHHHHHHH
Q psy15447 367 VQGHRD---TPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITC-NISHTEQDMNSLI 441 (457)
Q Consensus 367 ~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~ 441 (457)
+..+.. ..++++.++... ...++.+.|.++ ||.+.++..+ ...+++|+++ +...+++++++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~-----~~~~~iRis~~~~~~~~~~i~~~~ 385 (393)
T 1vjo_A 318 LHVEKEYRLPTLTTVCIPDGV-------DGKAVARRLLNEHNIEVGGGLGE-----LAGKVWRVGLMGFNSRKESVDQLI 385 (393)
T ss_dssp BSSCGGGBCSSEEEEECCTTC-------CHHHHHHHHHHHHCEECEECCGG-----GTTTEEEEECCGGGCSHHHHHHHH
T ss_pred ccCCccccCCcEEEEEcCCCC-------CHHHHHHHHHhhCCEEEecCccc-----cCCCEEEEeCCccCChHHHHHHHH
Confidence 643322 356777765333 345788999988 9999877642 2357999995 5566888999999
Q ss_pred HHHHHHH
Q psy15447 442 ETLCKSH 448 (457)
Q Consensus 442 ~~l~~~~ 448 (457)
++|++++
T Consensus 386 ~~l~~~l 392 (393)
T 1vjo_A 386 PALEQVL 392 (393)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998875
No 105
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.97 E-value=2.8e-30 Score=255.14 Aligned_cols=317 Identities=12% Similarity=0.049 Sum_probs=233.4
Q ss_pred CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhcCC---------
Q psy15447 95 ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYVKR--------- 163 (457)
Q Consensus 95 ~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~~~--------- 163 (457)
.+|++.+++.+++.+....+. ...+..+...++++++++++|.+ .++++++|++|+..++.++..+
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~---~~~~~~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~ 118 (397)
T 3f9t_A 42 VLPITRKIVDIFLETNLGDPG---LFKGTKLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGL 118 (397)
T ss_dssp CCTHHHHHHHHHTTCCTTSGG---GBHHHHHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHHHhhcCCCcc---cChhHHHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcc
Confidence 468999999998875322211 12256778889999999999865 4488889999999999988765
Q ss_pred ----CCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC
Q psy15447 164 ----NDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC 234 (457)
Q Consensus 164 ----gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~ 234 (457)
||.|+++.++|.++...++..|.++..++.+ |++++++.+++. ++++|++++++|++|.+.
T Consensus 119 ~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~----------~~~~v~~~~~~nptG~~~ 188 (397)
T 3f9t_A 119 SKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDY----------DVDGIIGIAGTTELGTID 188 (397)
T ss_dssp CCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHS----------CCCEEEEEBSCTTTCCBC
T ss_pred cCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCCCCcCCHHHHHHHHhhc----------CCeEEEEECCCCCCCCCC
Confidence 9999999999999999999999999988876 899999998751 346888888999999999
Q ss_pred ChHHHHHHHHHcCcEEEEEcCcccccccCCCCccc-----cccCCCCCCccEEEecCcccccC--cccEEEe-cHHHHHH
Q psy15447 235 PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVT-----EYFGVSTEEVDMIIGSLEHALGS--VGGFCVG-SSYIIEH 306 (457)
Q Consensus 235 ~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~-----~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~-~~~~~~~ 306 (457)
|+++|+++|++||+++|+||+|+.+.++..+.+.. ..++... ++|+++.|++|++++ ..|+++. ++.+.+.
T Consensus 189 ~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~~~ 267 (397)
T 3f9t_A 189 NIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGHCPIPSGGILFKDIGYKRY 267 (397)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTCCCSSCEEEEESSGGGGGG
T ss_pred CHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccccCCCCCceEEEEeCHHHHHh
Confidence 99999999999999999999998776654443110 1122222 568999999999843 2355544 5555544
Q ss_pred HHhhCCcceec-------CC---CcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeE
Q psy15447 307 HRLSGSGYCFS-------AS---LPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLK 376 (457)
Q Consensus 307 ~~~~~~~~~~~-------~~---~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 376 (457)
++.. ..+... ++ .++..++++++.+... ..++..++++++.+++.+.|++ .++.+..++.++++
T Consensus 268 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~ 341 (397)
T 3f9t_A 268 LDVD-APYLTETRQATILGTRVGFGGACTYAVLRYLGRE-GQRKIVNECMENTLYLYKKLKE----NNFKPVIEPILNIV 341 (397)
T ss_dssp TCEE-CTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH----TTCCBSSCCSSSEE
T ss_pred hccC-CccccCCCccccccccccchHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHH----CCCEEEcCCCccEE
Confidence 4221 112111 11 1444444444444321 1245778888999999999998 37765556667777
Q ss_pred EEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 377 YLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 377 ~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
++.+.. ..++.+.|.++||.+.+... ++++|++++..+|++|+++++++|+++++
T Consensus 342 ~~~~~~----------~~~~~~~l~~~gi~v~~~~~--------~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 342 AIEDED----------YKEVCKKLRDRGIYVSVCNC--------VKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp EEECTT----------HHHHHHHHHHTTCBCEECSS--------SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred EEEeCC----------HHHHHHHHHhCCeEEeccCC--------CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 776543 34788999999999887653 47999999999999999999999998764
No 106
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.97 E-value=4.7e-30 Score=253.25 Aligned_cols=312 Identities=13% Similarity=0.114 Sum_probs=233.2
Q ss_pred ChhhHHHHHHHHHhcCC-CCCCCCCcccC-hHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhh-cCCCCEEEEe
Q psy15447 96 NPDIEKCAIDCIDKNGV-GSCGPRGFYGT-NVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIAAY-VKRNDAVFVD 170 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~-~~~~~~~~~g~-~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~ 170 (457)
++++.+++.+++.+... ++..+. .|.. .+...++++.+++++|.+ .++++++|++|+..++.++ .++||.|++.
T Consensus 29 ~~~v~~a~~~~~~~~~~~~~~~~~-~y~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~gd~vl~~ 107 (390)
T 1elu_A 29 PTVALEAITAMYGYLQENGPFSIA-ANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLDWHQGDEILLT 107 (390)
T ss_dssp CHHHHHHHHHHHHHHHHHCSSSHH-HHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHHSCCCTTCEEEEE
T ss_pred CHHHHHHHHHHHHHHhccCCcchh-hHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhCCCCCCCCEEEEe
Confidence 57899999999986421 111000 1211 367889999999999966 6788889999999999999 8999999999
Q ss_pred CcccHHHHHH----HHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHH
Q psy15447 171 ENINFAIQTG----LIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDI 239 (457)
Q Consensus 171 ~~~h~~~~~~----~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i 239 (457)
.+.|.+.... .+..|.++..++.+ |++++++.++ +++++|++++++|++|.+.|+++|
T Consensus 108 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-----------~~~~~v~~~~~~nptG~~~~~~~i 176 (390)
T 1elu_A 108 DCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLG-----------PKTRLVILSHLLWNTGQVLPLAEI 176 (390)
T ss_dssp TTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCC-----------TTEEEEEEESBCTTTCCBCCHHHH
T ss_pred cCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcC-----------CCceEEEEeccccCCceecCHHHH
Confidence 9999887654 35668888888763 4666666553 246788999999999999999999
Q ss_pred HHHHH----HcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccc-ccCcc-cEEEecHHHHHHHHhhCC-
Q psy15447 240 LSLRS----KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHA-LGSVG-GFCVGSSYIIEHHRLSGS- 312 (457)
Q Consensus 240 ~~l~~----~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~-lg~~g-G~v~~~~~~~~~~~~~~~- 312 (457)
+++|+ +||+++|+||+|++|..+ .++....+|+++.|++|+ +|+.| |++++++++++.+.....
T Consensus 177 ~~l~~~~~~~~~~~li~Dea~~~g~~~---------~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~g 247 (390)
T 1elu_A 177 MAVCRRHQGNYPVRVLVDGAQSAGSLP---------LDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGDCLGEINPTYVG 247 (390)
T ss_dssp HHHHHHCCSSSCCEEEEECTTTBTTBC---------CCTTTSCCSEEEEESSSTTCCCTTCEEEEECTTTGGGCCCCSCC
T ss_pred HHHHhhhhhhcCcEEEEEcccccCCcC---------CChhhcCCCEEEccccccccCCCceEEEEECHHhHhhcCCcccc
Confidence 99999 999999999999875432 112123458999999994 45555 999999887776543211
Q ss_pred --------------------cceecCCCcHHHHHHHHHHHHHHhh---CcHHHHHHHHHHHHHHHHhhcccccCCeEEec
Q psy15447 313 --------------------GYCFSASLPPFLAVAANKALHLLKA---NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG 369 (457)
Q Consensus 313 --------------------~~~~~~~~~~~~~aaa~a~l~~~~~---~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~ 369 (457)
.+. .++.++..++++.++++.+.+ .++++++++++.+++.+.|++ .+|+.+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~---~~g~~~~~ 323 (390)
T 1elu_A 248 WRSITYGAKGEPTGWAEGGKRFE-VATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQ---LPHVHCLA 323 (390)
T ss_dssp TTTEEECTTSCEEEECSGGGGGC-CSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH---STTEEESC
T ss_pred CCcccccccCcccccccchHhhC-CCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh---cCCcEEec
Confidence 111 234577777777777776644 245778899999999999988 45887764
Q ss_pred c--CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 370 H--RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 370 ~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
+ ..++++.+.++... ...++.+.|.++||.+.++. .++++||+++..+|++|+++++++|+++
T Consensus 324 ~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~gi~v~~~~--------~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 324 TSAPQAGLVSFTVDSPL-------GHRAIVQKLEEQRIYLRTIA--------DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp SSCCSSSEEEEEECSSS-------CHHHHHHHHHHTTEECEEET--------TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred CccccccEEEEEcCCCC-------CHHHHHHHHHHCCEEEEecC--------CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 2 35777877775332 34578899999999998754 2478999999899999999999998753
No 107
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.97 E-value=1e-29 Score=252.68 Aligned_cols=345 Identities=12% Similarity=0.055 Sum_probs=239.8
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----C-CcEEEecccHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----L-EETALYSFGFSTS 153 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~-~~~i~~~sG~~a~ 153 (457)
+..+|||+.+.. .+..+|++.+++.+++.+... .++....|..++..++++.+.+.+| . +.++++++|++|+
T Consensus 22 ~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~ 98 (410)
T 3e2y_A 22 DPSVVNLGQGFP-DISPPSYVKEELSKAAFIDNM--NQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSL 98 (410)
T ss_dssp STTSEECSSCCC-CSCCCHHHHHHHHHHHTCGGG--GSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHH
T ss_pred CCCeEEecCCCC-CCCCCHHHHHHHHHHHhCccc--cCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHH
Confidence 356899988763 666789999999999875311 1111112334444444444444333 2 5678888888999
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC----------------CHHHHHHHHHhhchhcccCCCCc
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN----------------NMQHLEELLRQQDERDTLNSKVT 217 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----------------d~~~le~~l~~~~~~~~~~~~~~ 217 (457)
..++.+++++||.|++..++|..+...+...|.++..++.+ |++++++.++ ++
T Consensus 99 ~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~-----------~~ 167 (410)
T 3e2y_A 99 FNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFS-----------SK 167 (410)
T ss_dssp HHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCC-----------TT
T ss_pred HHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcC-----------CC
Confidence 99999999999999999999998888889999888877653 7788877663 24
Q ss_pred cEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc
Q psy15447 218 KKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG 294 (457)
Q Consensus 218 ~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g 294 (457)
+++|++++++||+|.+.+ +++|+++|++||+++|+||+|+.+.++.........+... .+.++++.|+||++|+.|
T Consensus 168 ~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~g~~G 246 (410)
T 3e2y_A 168 TKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGM-WERTITIGSAGKTFSVTG 246 (410)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTC-GGGEEEEEEHHHHSSCGG
T ss_pred ceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCc-cCeEEEEecchhhcCCCC
Confidence 678888999999999964 8899999999999999999998655432111111122211 234688999999998655
Q ss_pred ---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH--------hhCcHHHHHHHHHHHHHHHHhhcccccC
Q psy15447 295 ---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL--------KANPSLLTKLREKCNTMHSLLSQHKVTQ 363 (457)
Q Consensus 295 ---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~--------~~~~~~~~~l~~~~~~l~~~L~~~~~~~ 363 (457)
||+++++++++.+........+ +.+++.++++.++++.. +..++++++++++.+++.+.|++ .
T Consensus 247 ~r~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~ 320 (410)
T 3e2y_A 247 WKLGWSIGPAHLIKHLQTVQQNSFY--TCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNS----V 320 (410)
T ss_dssp GCCEEEECCHHHHHHHHHHHHTTTC--CCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHT----T
T ss_pred ceEEEEEECHHHHHHHHHHHHhhcc--CCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHH----C
Confidence 9999999998887654322223 34788888888887631 11135677888899999999988 4
Q ss_pred CeEEeccCCCCeEEEEecCCcc-hHH---HHHHHHHHHHHHH-HcCeeEeccccCcccc--CCCCCeEEEEecCCCCHHH
Q psy15447 364 RFLVQGHRDTPLKYLYLQKSDD-EVA---SKKLLQTICDMCI-QAGFAITCPSHLDQEA--KKQKPSIRITCNISHTEQD 436 (457)
Q Consensus 364 ~~~~~~~~~~~~~~i~~~~~~~-~~~---~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~--~~~~~~lRi~~~~~~t~ed 436 (457)
|+.+..+..+.++++.+..... ... ......+++++++ ++||++.++..+.... +...+++||+++. |+++
T Consensus 321 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~--~~e~ 398 (410)
T 3e2y_A 321 GLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIK--KDST 398 (410)
T ss_dssp TCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCC--CHHH
T ss_pred CCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcC--CHHH
Confidence 7877666677788877653110 000 0001236666665 5699998876532100 0125799999764 9999
Q ss_pred HHHHHHHHHH
Q psy15447 437 MNSLIETLCK 446 (457)
Q Consensus 437 i~~~~~~l~~ 446 (457)
+++++++|++
T Consensus 399 l~~~l~~l~~ 408 (410)
T 3e2y_A 399 LDAAEEIFRA 408 (410)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 108
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.97 E-value=3.9e-29 Score=243.34 Aligned_cols=330 Identities=12% Similarity=0.053 Sum_probs=236.5
Q ss_pred cCCCcEEE-ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEE
Q psy15447 69 QKSGYIVN-INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETAL 145 (457)
Q Consensus 69 ~~~g~~~~-~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~ 145 (457)
.+.|.+++ .+|+++|||+++.. .++.+|++.+++.+++..+. .+. .. ...++++++++++|.+ .+++
T Consensus 3 ~~~g~~~~~~~g~~~id~~~~~~-~~~~~~~v~~a~~~~~~~~~-~y~-------~~-~~~~lr~~la~~~~~~~~~i~~ 72 (350)
T 3fkd_A 3 FGHGDEGITPLSSEIVNFSTTVW-TDGDKDHLEKHLVENLNCIR-HYP-------EP-DAGTLRQMLAKRNSVDNNAILV 72 (350)
T ss_dssp -------------CCEECSCCSC-CCSCCHHHHHHHHHTGGGGG-SCC-------CT-TCHHHHHHHHHHTTCCGGGEEE
T ss_pred ccccchHhhhccccEEEccCCCC-CCCCCHHHHHHHHHhHhHHh-cCC-------CC-cHHHHHHHHHHHhCcCHHHEEE
Confidence 45666777 69999999998743 34467999999998884321 111 11 1268999999999864 6778
Q ss_pred ecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-CCHHHHHHHHHhhchhcccCCCCccEEEEEe
Q psy15447 146 YSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-NNMQHLEELLRQQDERDTLNSKVTKKFIIVE 224 (457)
Q Consensus 146 ~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e 224 (457)
+++|++++..++.++. ||.|+++.++|..+...++..|.++..++. ++.+.+.. +++++|+++
T Consensus 73 t~g~~~al~~~~~~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~--------------~~~~~v~i~ 136 (350)
T 3fkd_A 73 TNGPTAAFYQIAQAFR--GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEADF--------------SNMDFCWLC 136 (350)
T ss_dssp ESHHHHHHHHHHHHTT--TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGSCC--------------TTCSEEEEE
T ss_pred cCCHHHHHHHHHHHHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCccccCcc--------------CCCCEEEEe
Confidence 8888899999999888 999999999999999999999999999987 44332211 245677788
Q ss_pred cCCCCCCCCCChHHHHHHHHHcC-cEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEec
Q psy15447 225 GVYMNSADICPLKDILSLRSKYQ-ARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGS 300 (457)
Q Consensus 225 ~v~~~~G~i~~l~~i~~l~~~~g-~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~ 300 (457)
+++||+|.+.|++++.++++.++ .++|+||+|+.... .+.......+ ..+.++++.|+||++|++| ||++++
T Consensus 137 ~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~--~~~~~~~~~~--~~~~~i~~~S~sK~~~~~G~r~G~~~~~ 212 (350)
T 3fkd_A 137 NPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTT--EEVIRPADIK--GRKNLVMVYSFSHAYGIPGLRIGYIVAN 212 (350)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCS--SCCCCGGGGT--TCSSEEEEEESHHHHSCGGGCCEEEECC
T ss_pred CCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhcc--CcchhhHHhh--cCCCEEEEecCchhccCcchheEeEEeC
Confidence 99999999999999999998876 79999999975433 2222222222 2344688999999998555 999999
Q ss_pred HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447 301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL 380 (457)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~ 380 (457)
+++++.++..... .+.+++.++++.++++......+..++..++.+++.+.|++ .+++.+. ++.+.++++.+
T Consensus 213 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~-~~~~~~~~~~~ 284 (350)
T 3fkd_A 213 KDFMKRVAAFSTP----WAVNALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNR---LDGVEVH-PSGTTFFLLRL 284 (350)
T ss_dssp HHHHHHHHTTCCT----TCSCHHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHH---STTEEEC-CCSSSEEEEEE
T ss_pred HHHHHHHHHhCCC----CCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhc---CCCcEEC-CCCCcEEEEEC
Confidence 9999988765432 24688888888888875442222334444889999999988 4688875 56677888877
Q ss_pred cCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 381 QKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
+.. ...++.+.|.+ +||.++++..+. ....+++||+++ +++|+++++++|+++.++
T Consensus 285 ~~~--------~~~~l~~~L~~~~gi~v~~g~~f~---~~~~~~iRis~~---~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 285 KKG--------TAAELKKYMLEEYNMLIRDASNFR---GLDESYVRITTQ---RPAQNQLFIKALETFLEK 341 (350)
T ss_dssp SSS--------CHHHHHHHHHHTTCEECEECTTST---TCCTTEEEEECC---CHHHHHHHHHHHHHHHTC
T ss_pred CCC--------CHHHHHHHHHHHCCEEEEeCccCC---CCCCCEEEEEcC---CHHHHHHHHHHHHHHHHH
Confidence 653 24578899999 899998876432 233679999986 899999999999887643
No 109
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.97 E-value=5.4e-30 Score=252.09 Aligned_cols=333 Identities=14% Similarity=0.120 Sum_probs=240.0
Q ss_pred eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCC-CCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHH
Q psy15447 82 CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCG-PRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIA 158 (457)
Q Consensus 82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~-~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~ 158 (457)
|+|++++. ..+|++++++.+++.+....+.. +....+..+...++++++++++|.+ .++++++|++|+..++.
T Consensus 3 yld~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~ 78 (382)
T 4eb5_A 3 YFDYTSAK----PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAII 78 (382)
T ss_dssp BCBTTTCC----CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHH
T ss_pred eeccCCCC----CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHH
Confidence 56766642 24799999999999863211111 1111123567899999999999976 56777888999999999
Q ss_pred hhc----CCCCEEEEeCcccHHHHHHHHh---cCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447 159 AYV----KRNDAVFVDENINFAIQTGLIA---SRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV 226 (457)
Q Consensus 159 a~~----~~gd~v~~~~~~h~~~~~~~~~---~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v 226 (457)
++. ++||.|+++.+.|.++...+.. .|.++..++. .|++++++.+++ ++++|+++++
T Consensus 79 ~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----------~~~~v~~~~~ 147 (382)
T 4eb5_A 79 GYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD-----------DTILVSVQHA 147 (382)
T ss_dssp HHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCT-----------TEEEEECCSB
T ss_pred HHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcC-----------CCeEEEEecc
Confidence 987 8999999999999988776653 5888888775 378888887742 4578999999
Q ss_pred CCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHH
Q psy15447 227 YMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIE 305 (457)
Q Consensus 227 ~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~ 305 (457)
+||+|.+.|+++|.++|++||++ |+||+|++|... ..+ ..+ ++|+++.|++|.+|..| |+++++++.
T Consensus 148 ~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~---~~~-~~~-----~~di~~~s~sK~~g~~g~G~~~~~~~~-- 215 (382)
T 4eb5_A 148 NNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIE---VDV-EKI-----GADMLTISSNDIYGPKGVGALWIRKEA-- 215 (382)
T ss_dssp CTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBC---CCH-HHH-----TCSEEEEETGGGTCCSSCEEEEEETTC--
T ss_pred CCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcc---cCc-ccc-----CCCEEEeehHHhcCCCceEEEEEcccc--
Confidence 99999999999999999999999 999999865321 111 111 34899999999988654 787777653
Q ss_pred HHHhhCCc-----ceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC---CCeE
Q psy15447 306 HHRLSGSG-----YCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD---TPLK 376 (457)
Q Consensus 306 ~~~~~~~~-----~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~---~~~~ 376 (457)
.++....+ ....++.++..++++.++++.+.+. ++++++++++++++.+.|++ ++++.+..+.. +.++
T Consensus 216 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~~~~~~~ 292 (382)
T 4eb5_A 216 KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLK---IEESYLNGHPEKRLPNNV 292 (382)
T ss_dssp CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---STTEEECSCSSSBCTTEE
T ss_pred ccCceecCCCccccccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh---CCCeEEeCCcccCCCCEE
Confidence 11111110 0112335666666666777765432 45778889999999999988 46887764321 5577
Q ss_pred EEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc----------C----CCCCeEEEEecCCCCHHHHHHHHH
Q psy15447 377 YLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA----------K----KQKPSIRITCNISHTEQDMNSLIE 442 (457)
Q Consensus 377 ~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~----------~----~~~~~lRi~~~~~~t~edi~~~~~ 442 (457)
++.++. . ...++.+.|.++||.+.++.++.... . ...+.+|++++..+|++|++++++
T Consensus 293 ~~~~~~-~-------~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~ 364 (382)
T 4eb5_A 293 NVRFSY-I-------EGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLE 364 (382)
T ss_dssp EEEETT-S-------CHHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHH
T ss_pred EEEeCC-c-------CHHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHH
Confidence 777763 2 34578889999999998765422100 0 024789999998899999999999
Q ss_pred HHHHHHHHhc
Q psy15447 443 TLCKSHDIAV 452 (457)
Q Consensus 443 ~l~~~~~~~~ 452 (457)
+|++++++++
T Consensus 365 ~l~~~~~~~~ 374 (382)
T 4eb5_A 365 VLPGVIERLR 374 (382)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988765
No 110
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.97 E-value=6.5e-30 Score=254.55 Aligned_cols=337 Identities=11% Similarity=0.006 Sum_probs=231.8
Q ss_pred CeeeEEeecCCccCCCCC----hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC---cEEEecccHH
Q psy15447 79 GIPCINFATHNYLSFVEN----PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE---ETALYSFGFS 151 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~----p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~ 151 (457)
|+.+|||+.++|++..++ +.+.+++.+.... + ..++....|..++++++++.+.+..+.+ .++++++|++
T Consensus 36 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~--~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~ 112 (413)
T 3t18_A 36 REAVINAALGTLLDDKGKIIALPSVYDRLDEMDRS-H--IASYAPIEGEKDYRKIVIDTLFGPYKPEGYISAIATPGGTG 112 (413)
T ss_dssp GGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHH-H--HHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHH
T ss_pred ccceEeccccCccCCCCCcCChHHHHHHHHhcCcc-c--ccCcCCCCCCHHHHHHHHHHHhcccCccccCcEEEcCccHH
Confidence 578999999988665543 4566555443221 1 1112223456677777777776666666 7888889999
Q ss_pred HHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEec
Q psy15447 152 TSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEG 225 (457)
Q Consensus 152 a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~ 225 (457)
|+..++++++++||.|++..++|..+...++..|.++..++. .|++++++.+++... +..++++++++
T Consensus 113 al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~------~~~~~~vi~~~ 186 (413)
T 3t18_A 113 AIRSAIFSYLDEGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIR------DSDRIASLINS 186 (413)
T ss_dssp HHHHHHHHHCCSSCEEEEESSCCTHHHHHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHH------HCSEEEEEEEC
T ss_pred HHHHHHHHhcCCCCEEEECCCCcccHHHHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhh------cCCCEEEEEeC
Confidence 999999999999999999999999999999999999888874 378999999875321 02344788888
Q ss_pred C-CCCCCCCCChH---HHHHHHH------HcCcEEEEEcCcccccc-cCCCCccccc-cCCCCCCccEEEecCcccccCc
Q psy15447 226 V-YMNSADICPLK---DILSLRS------KYQARIFVDESVSFGTL-GSTGHGVTEY-FGVSTEEVDMIIGSLEHALGSV 293 (457)
Q Consensus 226 v-~~~~G~i~~l~---~i~~l~~------~~g~~li~DEa~~~g~~-g~~g~~~~~~-~~~~~~~~Di~~~s~sK~lg~~ 293 (457)
+ +||+|.+.|.+ +|+++|+ +||+++|+||+|+...+ |.....+... .++.++...++++|+||++|++
T Consensus 187 p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~ 266 (413)
T 3t18_A 187 PGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAY 266 (413)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCG
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCc
Confidence 7 89999999955 5556666 89999999999864322 2212222322 2333322237889999999876
Q ss_pred c---cEEEe---cHHHHHHHHhhCCcceec--CCCcHHHHHHHHHHHHHH------hhCcHHHHHHHHHHHHHHHHhhcc
Q psy15447 294 G---GFCVG---SSYIIEHHRLSGSGYCFS--ASLPPFLAVAANKALHLL------KANPSLLTKLREKCNTMHSLLSQH 359 (457)
Q Consensus 294 g---G~v~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~aaa~a~l~~~------~~~~~~~~~l~~~~~~l~~~L~~~ 359 (457)
| ||+++ ++++++.+.........+ .+.++++++++.++++.. +..++++++++++.+++.+.|++
T Consensus 267 G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~- 345 (413)
T 3t18_A 267 GLRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKE- 345 (413)
T ss_dssp GGCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CcCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 6 99988 899888876532111111 235677766666655322 22234677888999999999988
Q ss_pred cccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHH
Q psy15447 360 KVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNS 439 (457)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~ 439 (457)
.|+++..+..+.++++.+. ...++++.|.++||++.++ ++++||+++.. +++++
T Consensus 346 ---~g~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~gv~v~~g----------~~~iRis~~~~-~~~~~-- 399 (413)
T 3t18_A 346 ---NKLTMIPYFGGFFTFIPTD----------KAFDIVKDLEKENIFTIPS----------AKGIRVAICGV-GEEKI-- 399 (413)
T ss_dssp ---TTCCCBCCCSSSCEEEECS----------CHHHHHHHHHHTTEECEEC----------SSEEEECTTTS-CGGGH--
T ss_pred ---cCCCccCCCceEEEEeCCC----------CHHHHHHHHHhCCEEEecC----------CCceEEEEeeC-CHHHH--
Confidence 4776654445555666542 2346888899999999875 36899998853 55555
Q ss_pred HHHHHHHHHHHhc
Q psy15447 440 LIETLCKSHDIAV 452 (457)
Q Consensus 440 ~~~~l~~~~~~~~ 452 (457)
+++|.++++++.
T Consensus 400 -l~~l~~~l~~~~ 411 (413)
T 3t18_A 400 -PKLVQRLAFYTN 411 (413)
T ss_dssp -HHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHh
Confidence 677777666654
No 111
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.97 E-value=2.3e-29 Score=250.18 Aligned_cols=316 Identities=10% Similarity=0.097 Sum_probs=237.8
Q ss_pred ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc---EEEecccHHHHHHHHHhhcCCCCEEEEeCc
Q psy15447 96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE---TALYSFGFSTSASAIAAYVKRNDAVFVDEN 172 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~---~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~ 172 (457)
+|++.+++.+++ .++.. ....+...++++++++++|.+. +++++||++|+..++.+++++||.|++..+
T Consensus 25 ~~~v~~a~~~~~----~~~~~----~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~ 96 (411)
T 3nnk_A 25 DPRVLRAMSSQL----IGQYD----PAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVF 96 (411)
T ss_dssp CHHHHHHHTSCC----CCTTC----HHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CHHHHHHhhccc----ccccc----HHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecC
Confidence 577777766543 11111 1124667899999999998653 355567899999999999999999999999
Q ss_pred ccHH--HHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHH
Q psy15447 173 INFA--IQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSK 245 (457)
Q Consensus 173 ~h~~--~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~ 245 (457)
.|.+ +...+...|.++..++.+ |++++++.+++. ++++|++++++|++|.+.|+++|+++|++
T Consensus 97 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~----------~~~~v~~~~~~nptG~~~~l~~i~~l~~~ 166 (411)
T 3nnk_A 97 GRFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRI----------RPRLLLTVQGDTSTTMLQPLAELGEICRR 166 (411)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHH----------CCSEEEEESEETTTTEECCCTTHHHHHHH
T ss_pred CchHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhC----------CCeEEEEeCCCCCcceeccHHHHHHHHHH
Confidence 8876 677788889998888765 899999998752 45688899999999999999999999999
Q ss_pred cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcc-cEEEecHHHHHHHHhhC------------
Q psy15447 246 YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVG-GFCVGSSYIIEHHRLSG------------ 311 (457)
Q Consensus 246 ~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~g-G~v~~~~~~~~~~~~~~------------ 311 (457)
||+++|+||++++|... ++....++|+++.|++|++ |+.| |+++.++++++.++...
T Consensus 167 ~~~~li~Dea~~~~~~~---------~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 237 (411)
T 3nnk_A 167 YDALFYTDATASLGGNP---------LETDVWGLDAVSAGMQKCLGGPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHR 237 (411)
T ss_dssp HTCEEEEECTTTBTTBC---------CCTTTTTCSEEECCSTTTTCCCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCC
T ss_pred cCCEEEEECCcccCCcc---------cchhccCCcEEEecCccccCCCCceEEEEECHHHHHHHhhcccccccccccccc
Confidence 99999999998865432 1222234689999999986 4444 89999999988876432
Q ss_pred ----------------------CcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEE
Q psy15447 312 ----------------------SGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLV 367 (457)
Q Consensus 312 ----------------------~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~ 367 (457)
......++.+...++++.++++.+.+. ++++++++++.+++.+.|++ .++.+
T Consensus 238 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~----~g~~~ 313 (411)
T 3nnk_A 238 DGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQA----MGLET 313 (411)
T ss_dssp CCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCB
T ss_pred cccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH----cCCEe
Confidence 001122345777777777888776543 46788999999999999998 46665
Q ss_pred eccC---CCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEe-cCCCCHHHHHHHHH
Q psy15447 368 QGHR---DTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITC-NISHTEQDMNSLIE 442 (457)
Q Consensus 368 ~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~ 442 (457)
..+. .+.++++.++... ...++.+.|+++ ||.++++.. +..++++|+++ +..+|++|++++++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~l~~~~gi~v~~g~~-----~~~~~~iRi~~~~~~~~~~~i~~~~~ 381 (411)
T 3nnk_A 314 FGDLKHKMNNVLGVVIPQGI-------NGDQARKLMLEDFGIEIGTSFG-----PLHGKVWRIGTMGYNARKDCVMTTLS 381 (411)
T ss_dssp CSCGGGBCSSEEEEECCTTC-------CHHHHHHHHHHHHSEEEEECCG-----GGTTTEEEEECCGGGCSHHHHHHHHH
T ss_pred CCCcccccccEEEEECCCCC-------CHHHHHHHHHHhcCeEEeCccC-----CCCCCEEEEeCccCcCCHHHHHHHHH
Confidence 4332 2567777775433 356788999887 999987542 22357999998 77789999999999
Q ss_pred HHHHHHHHhcCC
Q psy15447 443 TLCKSHDIAVQP 454 (457)
Q Consensus 443 ~l~~~~~~~~~~ 454 (457)
+|+++++++..+
T Consensus 382 ~l~~~l~~~~~~ 393 (411)
T 3nnk_A 382 ALEAVLNYLKFP 393 (411)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 999999877544
No 112
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.97 E-value=4e-30 Score=257.47 Aligned_cols=340 Identities=11% Similarity=0.050 Sum_probs=242.3
Q ss_pred eeeEEeecCCccCCCCChhh--HHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc-----CC--Cc---EEEec
Q psy15447 80 IPCINFATHNYLSFVENPDI--EKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM-----GL--EE---TALYS 147 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i--~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-----g~--~~---~i~~~ 147 (457)
++++||+++.+..++.+|.+ .+++.+++.+... .+ |+......++++.+++++ +. +. +++++
T Consensus 47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~--~~----y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~ 120 (430)
T 2x5f_A 47 STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEI--FP----YAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTN 120 (430)
T ss_dssp TCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGT--SS----CCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEES
T ss_pred CCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccc--cc----cCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcC
Confidence 46899998765223335667 7776666543111 11 112222466777777776 53 46 77888
Q ss_pred ccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHh-cCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEE
Q psy15447 148 FGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIA-SRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKF 220 (457)
Q Consensus 148 sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~-~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~ 220 (457)
+|++|+..++.+++++||.|++..+.|..+...+.. .|.++..++. .|++++++.+++.. .++++
T Consensus 121 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~--------~~~~~ 192 (430)
T 2x5f_A 121 ALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYN--------KDKVI 192 (430)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCC--------SSEEE
T ss_pred CchHHHHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcC--------CCCEE
Confidence 889999999999999999999999999999888888 8988887764 36889998887532 24567
Q ss_pred EEEecCCCCCCCCCC---hHHHHHHHHH-----cCcEEEEEcCcccccccCCC-Cccc-cccCCCCCCc-cEEEecCccc
Q psy15447 221 IIVEGVYMNSADICP---LKDILSLRSK-----YQARIFVDESVSFGTLGSTG-HGVT-EYFGVSTEEV-DMIIGSLEHA 289 (457)
Q Consensus 221 vi~e~v~~~~G~i~~---l~~i~~l~~~-----~g~~li~DEa~~~g~~g~~g-~~~~-~~~~~~~~~~-Di~~~s~sK~ 289 (457)
+++.+++||+|.+.| +++|+++|++ ||+++|+||+|+.+.++..+ ..+. ...+..++.+ +++++|+||+
T Consensus 193 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 272 (430)
T 2x5f_A 193 MILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKE 272 (430)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHH
T ss_pred EEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccC
Confidence 777778999999999 8899999999 99999999999865553221 1222 2222221111 5889999999
Q ss_pred ccCcc---cEEEe---cHHHHHHHHhhCCcc--eecCCCcHHHHHHHHHHHH----HHhhCcHHHHHHHHHHHHHHHHhh
Q psy15447 290 LGSVG---GFCVG---SSYIIEHHRLSGSGY--CFSASLPPFLAVAANKALH----LLKANPSLLTKLREKCNTMHSLLS 357 (457)
Q Consensus 290 lg~~g---G~v~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~aaa~a~l~----~~~~~~~~~~~l~~~~~~l~~~L~ 357 (457)
+|++| ||+++ ++++++.+....... ..+.+.+++.++++.++++ ..++.+..+++++++.+++.+.|+
T Consensus 273 ~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 352 (430)
T 2x5f_A 273 FFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVY 352 (430)
T ss_dssp TTCGGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98655 99999 998888876432110 0123458888888888887 333333477888899999999998
Q ss_pred cccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHH
Q psy15447 358 QHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQD 436 (457)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ed 436 (457)
+.....++.+..+..+.++++.++ .. ...++++.|.+ +||++.++. .+++||+++. .++++
T Consensus 353 ~~~~~~g~~~~~~~~g~~~~~~~~-~~-------~~~~~~~~l~~~~gi~v~~g~---------~~~iRis~~~-~~~e~ 414 (430)
T 2x5f_A 353 ADQYHSHWQAYDFNSGYFMAIKVH-DV-------DPEALRKHLIDKYSIGVIALN---------ATDIRIAFSC-VEKDD 414 (430)
T ss_dssp CGGGTTTEEECCCCBSSEEEEEES-SS-------CHHHHHHHHHHHHCEECEECS---------SSEEEEEGGG-SCGGG
T ss_pred hhCCCCCceeeCCCceEEEEeCCC-CC-------CHHHHHHHHHHhCCEEEecCC---------CCeEEEEEec-CCHHH
Confidence 311004777764444566888876 32 34578899998 899998752 4789999986 49999
Q ss_pred HHHHHHHHHHHHHHh
Q psy15447 437 MNSLIETLCKSHDIA 451 (457)
Q Consensus 437 i~~~~~~l~~~~~~~ 451 (457)
+++++++|+++++++
T Consensus 415 i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 415 IPHVFDSIAKAIDDL 429 (430)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999998765
No 113
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.97 E-value=5.5e-30 Score=248.93 Aligned_cols=329 Identities=17% Similarity=0.181 Sum_probs=230.2
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHh
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA 159 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a 159 (457)
.++|||+++.... ..|++.+++.+... + ...|+..+...+|++++++++|.+.++++++|++|+..++.+
T Consensus 3 ~~~i~~~~~~~~~--p~~~~~~a~~~~~~--~------~~~y~~~~~~~~l~~~la~~~g~~~~~~~~~gt~a~~~~~~~ 72 (347)
T 1jg8_A 3 HMMIDLRSDTVTK--PTEEMRKAMAQAEV--G------DDVYGEDPTINELERLAAETFGKEAALFVPSGTMGNQVSIMA 72 (347)
T ss_dssp --CEECSCGGGCC--CCHHHHHHHHTCCC--C------CGGGTCCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHH
T ss_pred ceEEEeccccCCC--CCHHHHHHHhcCCC--C------CcccCCChHHHHHHHHHHHHhCCceEEEecCcHHHHHHHHHH
Confidence 4678998875533 45778777754321 0 112445667789999999999999999999999999999999
Q ss_pred hcCCCCEEEEeCcccHHHHH---HHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC-
Q psy15447 160 YVKRNDAVFVDENINFAIQT---GLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS- 230 (457)
Q Consensus 160 ~~~~gd~v~~~~~~h~~~~~---~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~- 230 (457)
+.++||.|+++.++|.+... .....|.++..+ .+ |++++++.+++... ..+++++|++++++||+
T Consensus 73 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~-----~~~~~~~v~~~~~~npt~ 146 (347)
T 1jg8_A 73 HTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNI-----HFPRTSLIAIENTHNRSG 146 (347)
T ss_dssp HCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCT-----TSCCEEEEEEESSBTTTT
T ss_pred hcCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cCCCCccCHHHHHHHhccccc-----cccCceEEEEeccccccC
Confidence 99999999999999987653 456678887776 32 78888888753110 00256889999999999
Q ss_pred CCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc-ccEEEecHHHHHH
Q psy15447 231 ADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV-GGFCVGSSYIIEH 306 (457)
Q Consensus 231 G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~-gG~v~~~~~~~~~ 306 (457)
|.+.| +++|.++|++||+++|+||+|.++.++..+..... .. ...|.++.|+||++|++ |+++++++++++.
T Consensus 147 G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~-~~---~~~d~~~~s~sK~l~~~~G~~~~~~~~~~~~ 222 (347)
T 1jg8_A 147 GRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKE-YA---GYADSVMFCLSKGLCAPVGSVVVGDRDFIER 222 (347)
T ss_dssp SBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHH-HH---HTCSEEEEESSSTTCCSSCEEEEECHHHHHH
T ss_pred CccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHH-hc---ccccEEEEecccccCCCceEEEEcCHHHHHH
Confidence 99888 46889999999999999999865432211111111 10 12366677999999854 4467788888776
Q ss_pred HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEe-ccCCCCeEEEEecC-Cc
Q psy15447 307 HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQ-GHRDTPLKYLYLQK-SD 384 (457)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~i~~~~-~~ 384 (457)
++.....+..+...+++.++++..+++...+ ..++..++.+++.+.|++ . ++.+. .++.++++++.++. ..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~l~~~L~~---~-~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
T 1jg8_A 223 ARKARKMLGGGMRQAGVLAAAGIIALTKMVD---RLKEDHENARFLALKLKE---I-GYSVNPEDVKTNMVILRTDNLKV 295 (347)
T ss_dssp HHHHHHHHTCCCSSTHHHHHHHHHHHHHSST---THHHHHHHHHHHHHHHHH---H-TCBCCGGGCCSSEEEEECTTSSS
T ss_pred HHHHHHHcCCchhHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHh---c-CceeccCCCcceEEEEEcccccC
Confidence 6432211211222355666666666654322 234445677888888887 3 55442 24567788888763 22
Q ss_pred chHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 385 DEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 385 ~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
...++.++|.++||.+++.. .+++|++++..+|++|+++++++|+++++.+
T Consensus 296 -------~~~~~~~~l~~~gi~v~~~~---------~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~ 346 (347)
T 1jg8_A 296 -------NAHGFIEALRNSGVLANAVS---------DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF 346 (347)
T ss_dssp -------CHHHHHHHHHHHTEECEEEE---------TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHCCCEEecCC---------CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence 34578999999999988643 3689999988899999999999999987653
No 114
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.97 E-value=2.7e-29 Score=250.09 Aligned_cols=318 Identities=11% Similarity=0.078 Sum_probs=236.3
Q ss_pred hhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc--EE-EecccHHHHHHHHHhhcCCCCEEEEeCccc
Q psy15447 98 DIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE--TA-LYSFGFSTSASAIAAYVKRNDAVFVDENIN 174 (457)
Q Consensus 98 ~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~--~i-~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h 174 (457)
.+.+++.+++.+...+.. .....+...++++++++++|.+. .+ +++||++|+..++.++.++||.|++..+.|
T Consensus 21 ~~~~~v~~a~~~~~~~~~----~~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~~ 96 (416)
T 3isl_A 21 EVDPRVLRVMSTPVVGQF----DPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGR 96 (416)
T ss_dssp CCCHHHHHHTTSCCCCTT----SHHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESSH
T ss_pred CcCHHHHHHhcccCCCCc----cHHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCCc
Confidence 455556666655322211 11235678899999999999653 34 566788999999999999999999998888
Q ss_pred HH--HHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcC
Q psy15447 175 FA--IQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQ 247 (457)
Q Consensus 175 ~~--~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g 247 (457)
.+ ....++..|.+++.++.+ |++++++.+++ +++++|++++++|++|.+.|+++|.++|++||
T Consensus 97 ~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~ 166 (416)
T 3isl_A 97 FGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKK----------VKPKIVAMVHGETSTGRIHPLKAIGEACRTED 166 (416)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH----------HCCSEEEEESEETTTTEECCCHHHHHHHHHTT
T ss_pred ccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhh----------CCCcEEEEEccCCCCceecCHHHHHHHHHHcC
Confidence 77 556678889998888765 89999999974 23478999999999999999999999999999
Q ss_pred cEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcc-cEEEecHHHHHHHHhhC--------------
Q psy15447 248 ARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVG-GFCVGSSYIIEHHRLSG-------------- 311 (457)
Q Consensus 248 ~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~g-G~v~~~~~~~~~~~~~~-------------- 311 (457)
+++|+||+|++|... .+....++|+++.|++|++ |+.| |+++.++++++.+....
T Consensus 167 ~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~l~g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~ 237 (416)
T 3isl_A 167 ALFIVDAVATIGGCE---------VKVDEWKIDAAIGGTQKCLSVPSGMAPITYNERVADVIAARKKVERGIATQADRAA 237 (416)
T ss_dssp CEEEEECTTTTTTSC---------CCTTTTTCSEEECCSSSTTCCCSSEEEEEECHHHHHHHHTC---------------
T ss_pred CEEEEECCccccCCC---------cchhhcCCCEEEecCccccCCCCCeEEEEECHHHHHHhhccccccccccccccchh
Confidence 999999999866432 1222234689999999986 4444 88999999888776321
Q ss_pred ---------------------Ccce-ecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEE
Q psy15447 312 ---------------------SGYC-FSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLV 367 (457)
Q Consensus 312 ---------------------~~~~-~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~ 367 (457)
.... ..++.+...++++.++++.+.+. ++++++++++++++.+.|++ .|+++
T Consensus 238 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~----~g~~~ 313 (416)
T 3isl_A 238 LSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKA----MGLRL 313 (416)
T ss_dssp ---CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCB
T ss_pred ccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH----cCCEe
Confidence 0111 12345777777777788776543 46788999999999999998 47666
Q ss_pred eccCC---CCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHH-HHHHHH
Q psy15447 368 QGHRD---TPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQD-MNSLIE 442 (457)
Q Consensus 368 ~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ed-i~~~~~ 442 (457)
..+.. +.++++.++... ...++.+.|.++ ||.++++.. +..++++|++++...|++| ++++++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L~~~~gi~v~~g~~-----~~~~~~iRi~~~~~~~~~e~i~~~~~ 381 (416)
T 3isl_A 314 FGDDSCKMPVVTCVEIPGGI-------DGESVRDMLLAQFGIEIASSFG-----PLAGKIWRIGTMGYSCRKENVLFVLA 381 (416)
T ss_dssp CSCGGGBCTTEEEEECCTTC-------CHHHHHHHHHHHHCEECBCCCS-----TTTTTEEEEECCGGGCSHHHHHHHHH
T ss_pred ccCccccCCcEEEEeCCCCC-------CHHHHHHHHHHhCCEEEecCCC-----CCCCCEEEEecccCCCcHHHHHHHHH
Confidence 53322 567778775433 456799999887 999987653 2346799999976667766 999999
Q ss_pred HHHHHHHHhcCC
Q psy15447 443 TLCKSHDIAVQP 454 (457)
Q Consensus 443 ~l~~~~~~~~~~ 454 (457)
+|+++++++..+
T Consensus 382 ~l~~~~~~~~~~ 393 (416)
T 3isl_A 382 GLEAVLLRHNAG 393 (416)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 999999876533
No 115
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.97 E-value=1.7e-29 Score=251.87 Aligned_cols=338 Identities=12% Similarity=0.035 Sum_probs=235.1
Q ss_pred CeeeEEeecCCccCCC----CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC---cEEEecccHH
Q psy15447 79 GIPCINFATHNYLSFV----ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE---ETALYSFGFS 151 (457)
Q Consensus 79 G~~~id~~s~~~l~~~----~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~ 151 (457)
|+++|||+.+.|.+.. ..+.+.+++.+..... ..++....|..++.+++++.+.+..+.+ .++++++|++
T Consensus 37 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~---~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~ 113 (418)
T 3rq1_A 37 RENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSE---HVGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTG 113 (418)
T ss_dssp GGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHH---HHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHH
T ss_pred CCCeEECCCCcccCCCCCccccHHHHHHHHHhcccc---cCCCCCCCChHHHHHHHHHHHhcccCccccccEEECCchHH
Confidence 5689999988775443 3455666654433211 0112222355666666666666655666 7888889999
Q ss_pred HHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEec
Q psy15447 152 TSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEG 225 (457)
Q Consensus 152 a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~ 225 (457)
|+..++.+++++||.|++..++|..+...+...|.++..++. .|++++++.+++... +.+++++++++
T Consensus 114 al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~------~~~~~~vi~~~ 187 (418)
T 3rq1_A 114 GIHHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAA------KQTNVVVIFNT 187 (418)
T ss_dssp HHHHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHH------HCSEEEEEEEC
T ss_pred HHHHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhc------cCCCEEEEEeC
Confidence 999999999999999999999999999999999999988773 278999999875321 02345788887
Q ss_pred C-CCCCCCCCChH---HHHHHHH------HcCcEEEEEcCcccccccCCCC---cccc-ccCCCCCCccEEEecCccccc
Q psy15447 226 V-YMNSADICPLK---DILSLRS------KYQARIFVDESVSFGTLGSTGH---GVTE-YFGVSTEEVDMIIGSLEHALG 291 (457)
Q Consensus 226 v-~~~~G~i~~l~---~i~~l~~------~~g~~li~DEa~~~g~~g~~g~---~~~~-~~~~~~~~~Di~~~s~sK~lg 291 (457)
+ +||+|.+.|.+ +|+++|+ +||+++|+||+|.... ..+. .+.. ..++.++...|+++|+||++|
T Consensus 188 p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 265 (418)
T 3rq1_A 188 PGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYS--GEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFT 265 (418)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGS--SCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTT
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccc--CChHHHHHHHHHHHhcCCCceEEEEEeCCCCCc
Confidence 7 99999999954 5556666 8999999999986432 2221 1222 223332211378899999998
Q ss_pred Ccc---cEEEe---cHHHHHHHHhhCCccee--cCCCcHHHHHHHHHHHHHH-------hhCcHHHHHHHHHHHHHHHHh
Q psy15447 292 SVG---GFCVG---SSYIIEHHRLSGSGYCF--SASLPPFLAVAANKALHLL-------KANPSLLTKLREKCNTMHSLL 356 (457)
Q Consensus 292 ~~g---G~v~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~aaa~a~l~~~-------~~~~~~~~~l~~~~~~l~~~L 356 (457)
++| ||+++ ++++++.+......... ..+.+.++++++.+.++.. ++..+++++++++.+++.+.|
T Consensus 266 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 345 (418)
T 3rq1_A 266 MYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEA 345 (418)
T ss_dssp CCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665 99988 88888887643211111 1235666666666665321 111245678888899999999
Q ss_pred hcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHH
Q psy15447 357 SQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQD 436 (457)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ed 436 (457)
++ .|+++..+..+.++++.+. ...++++.|.++||++.++. +++||++. .+|+++
T Consensus 346 ~~----~g~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~gi~v~~g~----------~~iRis~~-~~~~~~ 400 (418)
T 3rq1_A 346 AQ----VGLPMLPYRGGFFITIPTD----------SANAICEELKKEHIYVIALA----------NGIRIAAC-GIPKCQ 400 (418)
T ss_dssp HH----HTCCCCCCCSSSEEEEECT----------THHHHHHHHHHTTEECEECS----------SEEEEEGG-GSCHHH
T ss_pred Hh----cCCCCCCCCceEEEEcCCC----------CHHHHHHHHHhCCEEEecCC----------CCeEEEEe-cCCHHH
Confidence 88 3676654445555665543 23468888999999998753 68999976 579999
Q ss_pred HHHHHHHHHHHHHHhc
Q psy15447 437 MNSLIETLCKSHDIAV 452 (457)
Q Consensus 437 i~~~~~~l~~~~~~~~ 452 (457)
+++++++|+++++++.
T Consensus 401 i~~~~~~l~~~l~~~~ 416 (418)
T 3rq1_A 401 MTGLAEKIYNAMKSLG 416 (418)
T ss_dssp HTTHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 116
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.97 E-value=3.2e-29 Score=246.66 Aligned_cols=312 Identities=16% Similarity=0.138 Sum_probs=235.0
Q ss_pred ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc----EEEecccHHHHHHHHHhhcCCCCEEEEeC
Q psy15447 96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE----TALYSFGFSTSASAIAAYVKRNDAVFVDE 171 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~----~i~~~sG~~a~~~ai~a~~~~gd~v~~~~ 171 (457)
+|++.+++.+++..+ . .+...+...++++++++++|.+. ++++++|++|+. ++.++.++||.|++..
T Consensus 14 ~~~v~~a~~~~~~~~----~----~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~~ 84 (384)
T 3zrp_A 14 KEDVLVAGLENNVGF----T----SKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVVS 84 (384)
T ss_dssp CHHHHHHTTCCSCCT----T----SHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEEC
T ss_pred CHHHHHHhhcccccc----c----cHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEec
Confidence 577777766554321 0 11235678899999999999664 678888999999 9999999999999888
Q ss_pred cccHH--HHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHH
Q psy15447 172 NINFA--IQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS 244 (457)
Q Consensus 172 ~~h~~--~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~ 244 (457)
+.|.+ ....+...|.++..++.+ |++++++.+++ .++++|++++++|++|.+.|+++|.++|+
T Consensus 85 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----------~~~~~v~~~~~~nptG~~~~l~~i~~l~~ 154 (384)
T 3zrp_A 85 NGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRK----------SEYKLVALTHVETSTGVREPVKDVINKIR 154 (384)
T ss_dssp SSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHH----------SCEEEEEEESEETTTTEECCHHHHHHHHG
T ss_pred CCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHh----------CCCcEEEEeCCCCCCceECcHHHHHHHHH
Confidence 87755 334446778888888754 89999999875 24679999999999999999999999999
Q ss_pred HcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-Ccc-cEEEecHHHHHHH-H------------h
Q psy15447 245 KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVG-GFCVGSSYIIEHH-R------------L 309 (457)
Q Consensus 245 ~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~g-G~v~~~~~~~~~~-~------------~ 309 (457)
+||+++|+||+|++|... .++...++|+++.|++|+++ +.| |++++++++++.+ . .
T Consensus 155 ~~~~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (384)
T 3zrp_A 155 KYVELIVVDGVSSVGAEE---------VKAEEWNVDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAGYYLDLRN 225 (384)
T ss_dssp GGEEEEEEECTTTTTTSC---------CCTTTTTCSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHH
T ss_pred hcCCEEEEECcccccCcc---------ccccccCCCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCCCcccccHHH
Confidence 999999999999865432 12222346899999999985 444 8899999887766 1 1
Q ss_pred hC---------CcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC----CCC
Q psy15447 310 SG---------SGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR----DTP 374 (457)
Q Consensus 310 ~~---------~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~----~~~ 374 (457)
.. ... ..++.+...+++..++++.+... ++++++++++.+++.+.|++ .++++..+. .+.
T Consensus 226 ~~~~~~~~~~~~~~-~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~ 300 (384)
T 3zrp_A 226 WLPVMRGAEEGKAA-YFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEA----LGLEIVARRPESYSNT 300 (384)
T ss_dssp HHHHHHHHHTTCCC-CSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCBSCSSGGGBCSS
T ss_pred HHHHHHhhcccCCC-cCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH----CCCeEccCcccccCcc
Confidence 00 111 11245676767777788766543 46788999999999999998 366665333 356
Q ss_pred eEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447 375 LKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQP 454 (457)
Q Consensus 375 ~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~ 454 (457)
++++.++. . ...++.+.|.++||.++++.++ + .+++|++++..+|++|+++++++|+++++++..+
T Consensus 301 ~~~~~~~~-~-------~~~~~~~~l~~~gi~v~~g~~~----~--~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~~ 366 (384)
T 3zrp_A 301 VTGVILKV-A-------DPQKVLAGTVNEGVEFAPGVHP----A--FKYFRIGHMGWVTPNDAIIAISVIERTLRKLGEP 366 (384)
T ss_dssp EEEEECSS-S-------CHHHHHHHHHTTTCCCEECCCT----T--CCEEEEECCSSCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred EEEEECCC-C-------CHHHHHHHHHHCCEEEecCCCC----C--cCEEEEeccccCCHHHHHHHHHHHHHHHHHcCCC
Confidence 66777765 2 4567999999999999876531 1 1789999999999999999999999999887654
No 117
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.97 E-value=5.6e-29 Score=245.63 Aligned_cols=317 Identities=12% Similarity=0.103 Sum_probs=235.0
Q ss_pred CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC---cEEEecccHHHHHHHHHhhcCCCCEEEEeC
Q psy15447 95 ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE---ETALYSFGFSTSASAIAAYVKRNDAVFVDE 171 (457)
Q Consensus 95 ~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~ 171 (457)
.+|++.+++.+++.. .. .....+...++++++++++|.+ .++++++|++|+..+++++.++||.|++..
T Consensus 34 ~~~~v~~a~~~~~~~----~~----~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~ 105 (393)
T 3kgw_A 34 LAPRVLAAGSLRMIG----HM----QKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGT 105 (393)
T ss_dssp CCHHHHHHTTCCCCC----TT----SHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEE
T ss_pred CCHHHHHHhcccccC----cc----cHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEe
Confidence 357777776553311 11 1123467788999999999865 356778999999999999999999999887
Q ss_pred cccHH--HHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHH
Q psy15447 172 NINFA--IQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS 244 (457)
Q Consensus 172 ~~h~~--~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~ 244 (457)
+.|.+ ....+...|.++..++. .|++++++.+++. ++++|++++++|++|.+.|+++|+++|+
T Consensus 106 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~----------~~~~v~~~~~~nptG~~~~l~~i~~l~~ 175 (393)
T 3kgw_A 106 NGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQH----------KPVLLFLVHGESSTGVVQPLDGFGELCH 175 (393)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHH----------CCSEEEEESEETTTTEECCCTTHHHHHH
T ss_pred CCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhC----------CCcEEEEeccCCcchhhccHHHHHHHHH
Confidence 76643 35566778888887763 4899999998752 4568899999999999999999999999
Q ss_pred HcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-Cc-ccEEEecHHHHHHHHhhCCcc--------
Q psy15447 245 KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SV-GGFCVGSSYIIEHHRLSGSGY-------- 314 (457)
Q Consensus 245 ~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~-gG~v~~~~~~~~~~~~~~~~~-------- 314 (457)
+||+++|+||+|++|... ++....++|+++.|++|+++ +. .|++++++++++.+......+
T Consensus 176 ~~~~~li~De~~~~g~~~---------~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (393)
T 3kgw_A 176 RYQCLLLVDSVASLGGVP---------IYMDQQGIDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSFYTDIT 246 (393)
T ss_dssp HTTCEEEEECTTTTTTSC---------CCTTTTTCCEEEEESSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHH
T ss_pred HcCCEEEEECCccccCcc---------cchhhcCCCEEEecCcccccCCCceeEEEECHHHHHHHhccCCCCCceeecHH
Confidence 999999999999865321 12222345899999999884 44 489999999988876432111
Q ss_pred -------------eecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC----CCCe
Q psy15447 315 -------------CFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR----DTPL 375 (457)
Q Consensus 315 -------------~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~----~~~~ 375 (457)
.+.++.++..++++.++++.+.+. +++.++++++++++.+.|++ .++.+..+. .+.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~ 322 (393)
T 3kgw_A 247 YLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQE----MGLKFFVKDPEIRLPTI 322 (393)
T ss_dssp HHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCBSSSSGGGBCSSE
T ss_pred HHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH----cCCeeccCChhhcCCeE
Confidence 122345777777777888876542 56788999999999999998 366554221 2455
Q ss_pred EEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEe-cCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 376 KYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITC-NISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 376 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
+++.+.... ...++.+.|+++ ||.+.++..+ ..++++|+++ +..+|++|+++++++|+++++++.+
T Consensus 323 ~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~-----~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~ 390 (393)
T 3kgw_A 323 TTVTVPAGY-------NWRDIVSYVLDHFSIEISGGLGP-----TEERVLRIGLLGYNATTENVDRVAEALREALQHCPK 390 (393)
T ss_dssp EEEECCTTB-------CHHHHHHHHHHHHCEECBCCCGG-----GTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCB
T ss_pred EEEeCCCCC-------CHHHHHHHHHHhCCEEEeCCccc-----CCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhh
Confidence 567765443 456789999988 9999876542 3367999998 7667999999999999999988764
Q ss_pred C
Q psy15447 454 P 454 (457)
Q Consensus 454 ~ 454 (457)
.
T Consensus 391 ~ 391 (393)
T 3kgw_A 391 N 391 (393)
T ss_dssp C
T ss_pred c
Confidence 3
No 118
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.97 E-value=4.3e-29 Score=246.64 Aligned_cols=329 Identities=12% Similarity=0.017 Sum_probs=239.3
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAI 157 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai 157 (457)
..|+|..+. ...+|++.+++.+++.. .. .+...+...++++++++++|.+ .++++++|++|+..++
T Consensus 9 ~~yl~~~~~----~~~~~~v~~a~~~~~~~----~~----~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~ 76 (392)
T 2z9v_A 9 PVITLTAGP----VNAYPEVLRGLGRTVLY----DY----DPAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAA 76 (392)
T ss_dssp CSEECSSSC----CCCCHHHHHHTTSCCCC----TT----SHHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHH
T ss_pred cceeecCCC----cCCCHHHHHHHhccccc----cc----cHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHH
Confidence 345555432 12367888877665542 10 1223566789999999999965 5677788999999999
Q ss_pred HhhcCCCCEEEEeCcccHHHH--HHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447 158 AAYVKRNDAVFVDENINFAIQ--TGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS 230 (457)
Q Consensus 158 ~a~~~~gd~v~~~~~~h~~~~--~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~ 230 (457)
.++.++||.|++..+.|.+.. ..+...|.++..++. .|++++++.+++. +++++|++++++|++
T Consensus 77 ~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~---------~~~~~v~~~~~~npt 147 (392)
T 2z9v_A 77 ASLISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAH---------PEITVVSVCHHDTPS 147 (392)
T ss_dssp HHHCCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHC---------TTCCEEEEESEEGGG
T ss_pred HHhcCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcC---------CCCcEEEEeccCCCC
Confidence 999999999999998887652 223446778877764 4799999998641 245788999999999
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-Ccc-cEEEecHHHHHHHH
Q psy15447 231 ADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVG-GFCVGSSYIIEHHR 308 (457)
Q Consensus 231 G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~g-G~v~~~~~~~~~~~ 308 (457)
|.+.|+++|.++|++||+++|+||+|++|.... ++...++|+++.|++|+++ +.| |++++++++++.++
T Consensus 148 G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~---------~~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l~ 218 (392)
T 2z9v_A 148 GTINPIDAIGALVSAHGAYLIVDAVSSFGGMKT---------HPEDCKADIYVTGPNKCLGAPPGLTMMGVSERAWAKMK 218 (392)
T ss_dssp TEECCHHHHHHHHHHTTCEEEEECTTTBTTBSC---------CGGGGTCSEEEECSSSTTCCCSCCEEEEECHHHHHHHH
T ss_pred ceeccHHHHHHHHHHcCCeEEEEcccccCCccc---------ccccccceEEEecCcccccCCCceeEEEECHHHHHHhh
Confidence 999999999999999999999999998654321 1111135899999999774 445 89999999888775
Q ss_pred hhC------------------CcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEe
Q psy15447 309 LSG------------------SGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQ 368 (457)
Q Consensus 309 ~~~------------------~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~ 368 (457)
... ....+.++.++..++++.++++.+.+. ++.+++++++.+++.+.|++ . |+.+.
T Consensus 219 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~---~-g~~~~ 294 (392)
T 2z9v_A 219 ANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTA---M-GLSVW 294 (392)
T ss_dssp TCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH---T-TCCBS
T ss_pred hccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH---c-CCeec
Confidence 311 011223445777767777778766442 45788899999999999988 3 66665
Q ss_pred ccC----CCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecC-CCCHHHHHHHHH
Q psy15447 369 GHR----DTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNI-SHTEQDMNSLIE 442 (457)
Q Consensus 369 ~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~-~~t~edi~~~~~ 442 (457)
.++ .+.++++.++... ...++.++|.++ ||.+.++..+ ...+++|+++.. .+|++|++++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L~~~~gi~v~~g~~~-----~~~~~lRi~~~~~~~~~~~i~~~~~ 362 (392)
T 2z9v_A 295 AASDSIASPTTTAVRTPDGV-------DEKALRQAARARYGVVFSSGRGE-----TLGKLTRIGHMGPTAQPIYAIAALT 362 (392)
T ss_dssp SSSGGGBCTTEEEEECCTTC-------CHHHHHHHHHHHHCEECEECCGG-----GTTTEEEEECCGGGCSHHHHHHHHH
T ss_pred cCCccccCCceEEEECCCCC-------CHHHHHHHHHhcCCEEEecCCCC-----CCCCeEEEeCcccccCHHHHHHHHH
Confidence 312 4677788775332 345788999998 9999876532 235799999644 789999999999
Q ss_pred HHHHHHHHhcCC
Q psy15447 443 TLCKSHDIAVQP 454 (457)
Q Consensus 443 ~l~~~~~~~~~~ 454 (457)
+|+++++++.-+
T Consensus 363 ~l~~~~~~~~~~ 374 (392)
T 2z9v_A 363 ALGGAMNAAGRK 374 (392)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 999999877543
No 119
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.97 E-value=5.7e-30 Score=254.08 Aligned_cols=338 Identities=13% Similarity=0.086 Sum_probs=239.6
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHH-hcCCCCCCCCCcccChHHHHHH----HHHHHhhcCCCcEE-EecccHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCID-KNGVGSCGPRGFYGTNVVHLDL----ENDIASFMGLEETA-LYSFGFSTS 153 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~-~~~~~~~~~~~~~g~~~~~~~l----~~~la~~~g~~~~i-~~~sG~~a~ 153 (457)
+.++|+++++++ +|++.+++.+++. .++.++.+++...|. +...++ ++++++++|.+... ++++|++|+
T Consensus 24 ~~~~~~~~~~~~----~~~v~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~r~~la~~~g~~~~~i~~~sGt~a~ 98 (405)
T 2vi8_A 24 AKIELIASENFV----SRAVMEAQGSVLTNKYAEGYPGRRYYGGC-EYVDIVEELARERAKQLFGAEHANVQPHSGAQAN 98 (405)
T ss_dssp HSEECCTTCCCC----CHHHHHHHTSGGGGCCCCEETTEESSSCC-HHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHH
T ss_pred cceeeccCcccC----CHHHHHHHHHHhhcccccCCCCccccccc-hHHHHHHHHHHHHHHHHhCCCceEEEecCcHHHH
Confidence 457888877765 7999999999985 454433333322222 233444 46999999988664 468999999
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHH-H--HHhcC--CeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQT-G--LIASR--CKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFII 222 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~-~--~~~~g--~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi 222 (457)
..++++++++||.|++..++|+++.. . +...| .++..++. .|++++++.+++. ++++|+
T Consensus 99 ~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~----------~~~~v~ 168 (405)
T 2vi8_A 99 MAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLH----------RPKLIV 168 (405)
T ss_dssp HHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHH----------CCSEEE
T ss_pred HHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEecccccccCCcCHHHHHHHHHhc----------CCeEEE
Confidence 99999999999999999999876542 1 11223 25555542 4789999988642 234666
Q ss_pred EecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-CcccEEEecH
Q psy15447 223 VEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVGSS 301 (457)
Q Consensus 223 ~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~~ 301 (457)
+.+.+ .|...++++|+++|++||+++|+||+|++|.++. + ... .++ ...|+++.|+||+++ +.||++++++
T Consensus 169 ~~~~~--~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~-~--~~~-~~~--~~~di~~~s~sK~~~g~~gG~~~~~~ 240 (405)
T 2vi8_A 169 AAAAA--YPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAA-G--LHP-NPV--PYAHFVTTTTHKTLRGPRGGMILCQE 240 (405)
T ss_dssp ECCSS--CCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHT-T--SSC-CST--TTCSEEEEESSSTTCCCSCEEEEECH
T ss_pred EeCCC--CCccCCHHHHHHHHHHcCCEEEEEcccccccccc-C--cCC-Ccc--ccCCEEEEeccccCCCCCCeEEEEcH
Confidence 64332 3566789999999999999999999999776542 1 111 222 245899999999996 7789999999
Q ss_pred HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-CCCCeEEE
Q psy15447 302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-RDTPLKYL 378 (457)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~i 378 (457)
++++.+......+.++ +.++..++++.++++.+.. .++++++++++.+++.+.|++ .|+.+..+ ..++++++
T Consensus 241 ~~~~~l~~~~~~~~~~-~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~ 315 (405)
T 2vi8_A 241 QFAKQIDKAIFPGIQG-GPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQN----EGFTLVSGGTDNHLLLV 315 (405)
T ss_dssp HHHHHHHHHHTTTTCS-SCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH----TTCEEGGGSCSSSEEEE
T ss_pred HHHHHHHhhhcccccC-CCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh----CCCeEecCCCCceEEEE
Confidence 8888876543333333 3466666776777776542 246788999999999999998 37877654 35788888
Q ss_pred EecCC-cchHHHHHHHHHHHHHHHHcCeeEeccccCcc-ccCCCCCeEEEEecC----CCCHHHHHHHHHHHHHHHHHhc
Q psy15447 379 YLQKS-DDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCNI----SHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 379 ~~~~~-~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-~~~~~~~~lRi~~~~----~~t~edi~~~~~~l~~~~~~~~ 452 (457)
.+... . ...++.+.|.++||.++++..|.. ..+...+.+|++++. .++++|+++++++|+++++++.
T Consensus 316 ~~~~~~~-------~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~~ 388 (405)
T 2vi8_A 316 DLRPQQL-------TGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVG 388 (405)
T ss_dssp ECGGGTC-------CHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTT
T ss_pred EccCCCC-------CHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhccc
Confidence 87631 1 245688889899999987643211 001234689999986 6889999999999999987664
No 120
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.95 E-value=3e-33 Score=276.76 Aligned_cols=348 Identities=13% Similarity=0.097 Sum_probs=245.5
Q ss_pred eeeecCCCcEEEE-CCe--eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc---
Q psy15447 65 YVVDQKSGYIVNI-NGI--PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM--- 138 (457)
Q Consensus 65 ~~i~~~~g~~~~~-~G~--~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~--- 138 (457)
.+..+++|+++|+ +|+ +++||..+++ ++..+|++.+++.+++.+...++. . ...++++.+++++
T Consensus 13 ~~~~~~~g~~~~d~~g~~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~y~-------~--~~~~l~~~la~~l~~~ 82 (392)
T 3b1d_A 13 APNRLSHHTYKWKETETDPQLLPAWIADM-DFEVMPEVKQAIHDYAEQLVYGYT-------Y--ASDELLQAVLDWEKSE 82 (392)
Confidence 3455789999994 898 9999988776 677789999999999865211111 1 1445555555543
Q ss_pred -C----CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHh
Q psy15447 139 -G----LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--------NNMQHLEELLRQ 205 (457)
Q Consensus 139 -g----~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~~~le~~l~~ 205 (457)
| .+.++++++|++|+..++++++++||.|++..+.|..+...+...|.++..++. .|++++++.+++
T Consensus 83 ~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~ 162 (392)
T 3b1d_A 83 HQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVE 162 (392)
Confidence 4 345677778889999999999999999999999998888888878877776654 266777777753
Q ss_pred hchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC--CCcc
Q psy15447 206 QDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST--EEVD 280 (457)
Q Consensus 206 ~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~--~~~D 280 (457)
.++++|++++++||+|.+.| +++|+++|++||+++|+||+|+.+.++ |......+.+.+ .+.+
T Consensus 163 ----------~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~~ 230 (392)
T 3b1d_A 163 ----------NDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLF--GHEHVSFNTVSPDFKDFA 230 (392)
Confidence 23457777889999999877 889999999999999999999865543 222222233322 2446
Q ss_pred EEEecCcccccCcc---cEEEecH-HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHH
Q psy15447 281 MIIGSLEHALGSVG---GFCVGSS-YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSL 355 (457)
Q Consensus 281 i~~~s~sK~lg~~g---G~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~ 355 (457)
++++|+||++|.+| ||+++++ ++++.++.....+.++ +.+++.++++.++++..++ .++.+++++++.+++.+.
T Consensus 231 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 309 (392)
T 3b1d_A 231 LVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNHH-EVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEY 309 (392)
Confidence 88999999997555 8888864 5888776544333322 3477777777777764221 234667777888888888
Q ss_pred hhcccccCCeEEeccCCCCeEEEEecCC-cchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCC
Q psy15447 356 LSQHKVTQRFLVQGHRDTPLKYLYLQKS-DDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHT 433 (457)
Q Consensus 356 L~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t 433 (457)
|++. .+++.+..+..+.++++.++.. . ...++++.|+ ++||++.++..+. ...++++|+++.. +
T Consensus 310 l~~~--~~~~~~~~~~~~~~~~i~~~~~~~-------~~~~l~~~l~~~~gi~v~~g~~f~---~~~~~~iRi~~~~--~ 375 (392)
T 3b1d_A 310 FAQE--APRLKVMKPQGTYLIWLDFSDYGL-------TDDALFTLLHDQAKVILNRGSDYG---SEGELHARLNIAA--P 375 (392)
Confidence 7651 1466665444455556666532 1 3457888887 7899998865432 1235789999764 6
Q ss_pred HHHHHHHHHHHHHHHH
Q psy15447 434 EQDMNSLIETLCKSHD 449 (457)
Q Consensus 434 ~edi~~~~~~l~~~~~ 449 (457)
++++++++++|+++++
T Consensus 376 ~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 376 KSLVEEICKRIVCCLP 391 (392)
Confidence 8999999999988764
No 121
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.97 E-value=6.5e-29 Score=245.44 Aligned_cols=331 Identities=10% Similarity=0.082 Sum_probs=237.4
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC---cEEEecccHHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE---ETALYSFGFSTSA 154 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~ 154 (457)
+|+.|.+..+ ....+|++.+++.+++.. .. .....+...++++.+++++|.+ .++++++|++|+.
T Consensus 17 ~~~~~~~~~g----~~~~~~~v~~a~~~~~~~---~~-----~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~ 84 (393)
T 2huf_A 17 TPNKLLMGPG----PSNAPQRVLDAMSRPILG---HL-----HPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGME 84 (393)
T ss_dssp CCCCEECSSS----CCCCCHHHHHHTTSCCCC---TT-----SHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHH
T ss_pred CCCeEEecCC----CCCCCHHHHHHHHhhhcc---CC-----CHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHH
Confidence 3455554333 223468888887765532 00 0113567889999999999975 3556688899999
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHH--HHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQ--TGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY 227 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~--~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~ 227 (457)
.++.++.++||.|++..+.|.+.. ..+...|.+++.++. .|++++++.+++. ++++|++++++
T Consensus 85 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~----------~~~~v~~~~~~ 154 (393)
T 2huf_A 85 ATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIH----------KPSVLFLTQGD 154 (393)
T ss_dssp HHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHH----------CCSEEEEESEE
T ss_pred HHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhcc----------CCcEEEEEccC
Confidence 999999999999999988877632 233456888887763 5899999988641 34688889999
Q ss_pred CCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-Ccc-cEEEecHHHHH
Q psy15447 228 MNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVG-GFCVGSSYIIE 305 (457)
Q Consensus 228 ~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~g-G~v~~~~~~~~ 305 (457)
|++|.+.|+++|.++|++||+++|+||++++|... .++...++|+++.|++|+++ +.| |++++++++++
T Consensus 155 nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~~~~~ 225 (393)
T 2huf_A 155 SSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAP---------MFMDRWEIDAMYTGSQKVLGAPPGITPVSFSHRAVE 225 (393)
T ss_dssp TTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBC---------CCTTTTTCSEEECCSSSTTCCCSSCEEEEECHHHHH
T ss_pred CCccccCCHHHHHHHHHHcCCEEEEEcccccCCCC---------cchhhcCccEEEECCCcccccCCCeEEEEECHHHHH
Confidence 99999999999999999999999999998865321 11211245899999999864 445 89999999988
Q ss_pred HHHhhC---Ccce-----------------e-cCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhccccc
Q psy15447 306 HHRLSG---SGYC-----------------F-SASLPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVT 362 (457)
Q Consensus 306 ~~~~~~---~~~~-----------------~-~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~ 362 (457)
.++... .++. + .++.+...++++.++++.+.+ .++.+++++++++++.+.|++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~---- 301 (393)
T 2huf_A 226 RYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQD---- 301 (393)
T ss_dssp HHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH----
T ss_pred HHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH----
Confidence 876431 1211 1 123466666666678877643 245778899999999999988
Q ss_pred CCeEEeccC---CCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEe-cCCCCHHHH
Q psy15447 363 QRFLVQGHR---DTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITC-NISHTEQDM 437 (457)
Q Consensus 363 ~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi 437 (457)
.|+.+..+. .+.++++.++... ...++.+.|.++ ||.++++..+ ...+++|+++ +...+++|+
T Consensus 302 ~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~L~~~~gi~v~~g~~~-----~~~~~~Ri~~~~~~~~~e~i 369 (393)
T 2huf_A 302 AGFELYADPKDRLSTVTTIKVPQGV-------DWLKAAQYAMKTYLVEISGGLGP-----TAGQVFRIGLMGQNATTERV 369 (393)
T ss_dssp TTCCBSSCGGGBCTTEEEEECCTTC-------CHHHHHHHHHHHHCEECBCCCGG-----GTTTEEEEECCGGGCSHHHH
T ss_pred cCCeeccCccccCCcEEEEEcCCCC-------CHHHHHHHHHHhCCEEEecCccc-----ccCCEEEEEcccCcCCHHHH
Confidence 366654332 2347777775332 345788889875 9999876532 2357999999 656689999
Q ss_pred HHHHHHHHHHHHHhcCCC
Q psy15447 438 NSLIETLCKSHDIAVQPL 455 (457)
Q Consensus 438 ~~~~~~l~~~~~~~~~~~ 455 (457)
++++++|+++++++..+.
T Consensus 370 ~~~~~~l~~~~~~~~~~~ 387 (393)
T 2huf_A 370 DRVLQVFQEAVAAVKPDV 387 (393)
T ss_dssp HHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHcCCCc
Confidence 999999999998887653
No 122
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.97 E-value=2.8e-29 Score=250.13 Aligned_cols=328 Identities=13% Similarity=0.073 Sum_probs=237.3
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHh-cCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDK-NGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSA 154 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~ 154 (457)
+|..|+|++++. ..+|++.+++.+++.+ ++..........+..+...++++++++++|.+ .++++++|++++.
T Consensus 27 ~~~~yld~~~~~----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~ 102 (416)
T 1qz9_A 27 EGVIYLDGNSLG----ARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLF 102 (416)
T ss_dssp TTCEECCTTTSC----CCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHH
T ss_pred CCeEeecCCCcC----CCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCCCcccEEEeCChhHHHH
Confidence 356777776542 3468899999999975 22211100111133577889999999999965 5677778888888
Q ss_pred HHHHhhc------CCCC-EEEEeCcccHHHHHHHH----hc--CCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447 155 SAIAAYV------KRND-AVFVDENINFAIQTGLI----AS--RCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFI 221 (457)
Q Consensus 155 ~ai~a~~------~~gd-~v~~~~~~h~~~~~~~~----~~--g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~v 221 (457)
.++.++. ++|| +|+.+.++|+++...+. .. |.++..++. ++++++.+. +++++|
T Consensus 103 ~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~l~~~i~-----------~~~~~v 169 (416)
T 1qz9_A 103 KVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS--PEELPQAID-----------QDTAVV 169 (416)
T ss_dssp HHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS--GGGHHHHCS-----------TTEEEE
T ss_pred HHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc--HHHHHHHhC-----------CCceEE
Confidence 8888876 8887 57778889997665432 23 888888876 777777664 245799
Q ss_pred EEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc--Ccc-cEEE
Q psy15447 222 IVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG--SVG-GFCV 298 (457)
Q Consensus 222 i~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg--~~g-G~v~ 298 (457)
++++++|++|.+.|+++|+++|++||+++|+||+|++|... ... ..+ ++|+++.|++|+++ ..+ |+++
T Consensus 170 ~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~---~~~-~~~-----~~d~~~~s~~K~l~~g~~~~g~l~ 240 (416)
T 1qz9_A 170 MLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVP---VDL-HQA-----GADYAIGCTYKYLNGGPGSQAFVW 240 (416)
T ss_dssp EEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSC---CCH-HHH-----TCSEEEECSSSTTCCCTTCCCEEE
T ss_pred EEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcC---CCh-hhc-----CCCEEEecCcccCCCCCCCeEEEE
Confidence 99999999999999999999999999999999999865432 111 112 24899999999973 455 8999
Q ss_pred ecHHHHHHHHhhCCcc--------------------ee-cCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHH
Q psy15447 299 GSSYIIEHHRLSGSGY--------------------CF-SASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSL 355 (457)
Q Consensus 299 ~~~~~~~~~~~~~~~~--------------------~~-~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~ 355 (457)
+++++++.++....++ .+ .++.++..++++.++++.+.+. +++.++++++++++.+.
T Consensus 241 ~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 320 (416)
T 1qz9_A 241 VSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIEL 320 (416)
T ss_dssp ECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ECHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 9988766554321110 11 2345777777788888877532 45788899999999999
Q ss_pred hhcccccC--CeEEeccC----CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEec
Q psy15447 356 LSQHKVTQ--RFLVQGHR----DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCN 429 (457)
Q Consensus 356 L~~~~~~~--~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~ 429 (457)
|+++. + |+.+..+. .++++++.+.+ ..++.+.|.++||.+... ..+.+|++++
T Consensus 321 L~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~----------~~~l~~~l~~~gi~~~~~---------~~~~lRis~~ 379 (416)
T 1qz9_A 321 VEQRC--AAHELTLVTPREHAKRGSHVSFEHPE----------GYAVIQALIDRGVIGDYR---------EPRIMRFGFT 379 (416)
T ss_dssp HHHHH--TTSCCEECSCSSGGGBCSEEEEECTT----------HHHHHHHHHTTTEECEEE---------TTTEEEEECC
T ss_pred HHhhc--cCCCeEEeCCCCHHHcCCEEEEecCC----------HHHHHHHHHhCCcEeccC---------CCCeEEEeCc
Confidence 98720 3 77775442 35677777653 246888999999987532 2478999997
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 430 -ISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 430 -~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
..+|++|+++++++|++++++..
T Consensus 380 ~~~~t~~~i~~~~~~l~~~~~~~~ 403 (416)
T 1qz9_A 380 PLYTTFTEVWDAVQILGEILDRKT 403 (416)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCHHHHHHHHHHHHHHHhccc
Confidence 58999999999999999987653
No 123
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.97 E-value=2.7e-28 Score=244.09 Aligned_cols=305 Identities=12% Similarity=0.107 Sum_probs=215.5
Q ss_pred HHHHHHHHhhcC----------CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHH-hcCCeEEEecCC--
Q psy15447 128 LDLENDIASFMG----------LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLI-ASRCKVQYFKHN-- 194 (457)
Q Consensus 128 ~~l~~~la~~~g----------~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~-~~g~~~~~~~~~-- 194 (457)
.+|++.++++++ .+.+++++++++++..++.+++++||.|++..++|..+...+. ..|.++..++.+
T Consensus 86 ~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~ 165 (428)
T 1iay_A 86 PEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESS 165 (428)
T ss_dssp HHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCc
Confidence 456666666554 3456777777899999999999999999999999988776554 678888887642
Q ss_pred -----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCC
Q psy15447 195 -----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGH 266 (457)
Q Consensus 195 -----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~ 266 (457)
|++++++.+++.... ..++++|++++++||+|.+.| +++|+++|++||+++|+||+|+.+.++....
T Consensus 166 ~~~~~d~~~l~~~l~~~~~~-----~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~ 240 (428)
T 1iay_A 166 NNFKITSKAVKEAYENAQKS-----NIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQF 240 (428)
T ss_dssp TTTCCCHHHHHHHHHHHHHT-----TCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCC
T ss_pred cCCcCCHHHHHHHHHHHHhc-----CCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCc
Confidence 788999888753210 135677888889999999999 8999999999999999999998654432111
Q ss_pred -cccccc------CCCCCCccEEEecCcccccCcc---cEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH
Q psy15447 267 -GVTEYF------GVSTEEVDMIIGSLEHALGSVG---GFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL 335 (457)
Q Consensus 267 -~~~~~~------~~~~~~~Di~~~s~sK~lg~~g---G~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~ 335 (457)
.+.... ++.++. .+++.|+||++|.+| |++++ ++++++.++..... + +.++++++++.++++..
T Consensus 241 ~~~~~~~~~~~~~~~~~d~-viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~a~~~~l~~~ 315 (428)
T 1iay_A 241 VSIAEILDEQEMTYCNKDL-VHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSF--G--LVSTQTQYFLAAMLSDE 315 (428)
T ss_dssp CCHHHHHTSGGGTTSCTTS-EEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHHTT--S--CCCHHHHHHHHHHTTCH
T ss_pred cCHHHhccccccccCCCCc-EEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHHhc--c--cCCHHHHHHHHHHhcCh
Confidence 111111 111322 288899999998655 89888 67888877643221 2 34777777777776532
Q ss_pred h----hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEecc
Q psy15447 336 K----ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCP 410 (457)
Q Consensus 336 ~----~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~ 410 (457)
+ ..++++++++++.+++.+.|++ .|+++..+..+.++++.+...... .......++.+.|+++ ||++.++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~gi~v~~~ 390 (428)
T 1iay_A 316 KFVDNFLRESAMRLGKRHKHFTNGLEV----VGIKCLKNNAGLFCWMDLRPLLRE-STFDSEMSLWRVIINDVKLNVSPG 390 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH----TTCCBCCCSSSSEEEEECGGGCSS-SSHHHHHHHHHHHHHTSCEECEEG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCcccCCCeeEEEEEechhhcCC-CchhHHHHHHHHHHHhCCEEEeCc
Confidence 2 1235677888999999999988 366665333677888887642100 0001345788999987 9999886
Q ss_pred ccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 411 SHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 411 ~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
..+.. ..++++||+++ .+|++++++++++|++++++.
T Consensus 391 ~~~~~---~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~~ 427 (428)
T 1iay_A 391 SSFEC---QEPGWFRVCFA-NMDDGTVDIALARIRRFVGVE 427 (428)
T ss_dssp GGGTC---SSSSEEEEECS-SSCHHHHHHHHHHHHHHHHTT
T ss_pred hhhCC---CCCCEEEEEEe-cCCHHHHHHHHHHHHHHHhcc
Confidence 54211 12468999998 589999999999999988653
No 124
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.97 E-value=3e-28 Score=235.61 Aligned_cols=310 Identities=12% Similarity=0.093 Sum_probs=231.6
Q ss_pred CCeeeEEeecC-CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHH
Q psy15447 78 NGIPCINFATH-NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSA 154 (457)
Q Consensus 78 ~G~~~id~~s~-~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~ 154 (457)
+.+++|||++| ++++ .+|.+.+++.+++..+.. | ..+...++++.+++++|.+ .+++++++++++.
T Consensus 14 ~~~~~i~l~~n~~~~~--~~~~v~~a~~~~~~~~~~--------y-~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~ 82 (337)
T 3p1t_A 14 AAAQAVCLAFNENPEA--VEPRVQAAIAAAAARINR--------Y-PFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFD 82 (337)
T ss_dssp CCCCCEECSSCCCCSC--CCHHHHHHHHHHGGGTTS--------C-CTTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHH
T ss_pred CCCCceEeeCCCCCCC--CCHHHHHHHHHhhhhhcc--------C-CCCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHH
Confidence 45789999988 5544 469999999998865321 1 1346788999999999965 4566666678888
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN 229 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~ 229 (457)
.++.++ +||.|+++.++|..+...++..|.++..++.+ |++++++. .+++++++++++||
T Consensus 83 ~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~-------------~~~~~v~i~~p~np 147 (337)
T 3p1t_A 83 RISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV-------------SRDDCVVLANPSNP 147 (337)
T ss_dssp HHHHHS--TTSEEEEESSSCSHHHHHHTTSCCEEEEECBCTTSSBCHHHHTTC-------------CTTEEEEEESSCTT
T ss_pred HHHHhc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHhh-------------cCCCEEEEeCCCCC
Confidence 888877 89999999999999999999999999888743 67766543 13478899999999
Q ss_pred CCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHH
Q psy15447 230 SADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEH 306 (457)
Q Consensus 230 ~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~ 306 (457)
+|.+.|++++.++|+++++ +|+||+|+.. +..+... ....+.+++++|+||++|.+| ||+++++++++.
T Consensus 148 tG~~~~~~~l~~l~~~~~~-~ivDea~~~~--~~~~~~~-----~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~ 219 (337)
T 3p1t_A 148 TGQALSAGELDQLRQRAGK-LLIDETYVDY--SSFRARG-----LAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAA 219 (337)
T ss_dssp TCCCCCHHHHHHHHHHCSE-EEEECTTGGG--SSCSSSC-----CCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHH
T ss_pred CCCCCCHHHHHHHHHhCCc-EEEECCChhh--ccccccc-----cccCCCEEEEeeCchhccCcchheEEEEeCHHHHHH
Confidence 9999999999999999997 5669998642 2111111 111244799999999998555 999999999998
Q ss_pred HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch
Q psy15447 307 HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE 386 (457)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 386 (457)
+..... ..+.+++.++++.++++..+...+.++++.++.+++.+.|++ .|+.+. ++.+.++++...+.
T Consensus 220 l~~~~~----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~~~~~~~~~~--- 287 (337)
T 3p1t_A 220 MKRKQW----FCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRG----LGYRVA-SSEANFVLVENAAG--- 287 (337)
T ss_dssp HHTTSC----TTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHH----TTCCBC-CCSSSEEEEECTTT---
T ss_pred HHhhcC----CCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH----CcCEEC-CCCCeEEEEEcCCH---
Confidence 865432 224567777777666654322234567777888999999988 466654 45677777766543
Q ss_pred HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 387 VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 387 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
..+.+.|.++||.++++..+ ..++++|++++ +++|+++++++|+++.
T Consensus 288 -------~~~~~~l~~~gi~v~~g~~~-----~~~~~iRis~~---~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 288 -------ERTLRFLRERGIQVKDAGQF-----GLHHHIRISIG---REEDNDRLLAALAEYS 334 (337)
T ss_dssp -------HHHHHHHHHTTEECEEGGGG-----TCCSEEEEECC---CHHHHHHHHHHHHHHT
T ss_pred -------HHHHHHHHHCCeEEEECccC-----CCCCeEEEecC---CHHHHHHHHHHHHHHh
Confidence 25677888999999987653 23579999986 7999999999998865
No 125
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.97 E-value=1.9e-28 Score=242.85 Aligned_cols=293 Identities=13% Similarity=0.152 Sum_probs=220.5
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~ 198 (457)
..+...++++++++++|.+..+++++|++|+..++.++.++||.|++..+.|.++...+ ...|.++..++.+|+++
T Consensus 62 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~ 141 (398)
T 2rfv_A 62 GNPTTDALEKKLAVLERGEAGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAAKPEE 141 (398)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHH
T ss_pred CChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCCCHHH
Confidence 57888999999999999999999999999999999999999999999999999888776 77899999999999999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.+++ ++++|++++++|++|.+.|+++|+++|++||+++|+||+|+.+.++. .. .+ +
T Consensus 142 l~~~i~~-----------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~---~~--~~-----~ 200 (398)
T 2rfv_A 142 IRAAMRP-----------ETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQ---PL--QL-----G 200 (398)
T ss_dssp HHHHCCT-----------TEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTCC---GG--GG-----T
T ss_pred HHHhcCC-----------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCC---ch--hh-----C
Confidence 9888742 45789999999999999999999999999999999999998765532 11 12 3
Q ss_pred ccEEEecCcccccCc----ccEEEecHHHHH-HHHhhCCccee-cCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGSV----GGFCVGSSYIIE-HHRLSGSGYCF-SASLPPFLAVAANKALHLLKANPSLLTKLREKCNTM 352 (457)
Q Consensus 279 ~Di~~~s~sK~lg~~----gG~v~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l 352 (457)
+|+++.|++|+++++ ||++++++++++ .++... ..+ +.+.+++.++++.++++.+. ...++..++.+.+
T Consensus 201 ~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~l 275 (398)
T 2rfv_A 201 ADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGL--KDITGGCMSPFNAWLTLRGVKTLG---IRMERHCENALKI 275 (398)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHH--HHTTCCCCCHHHHHHHHHHHTTHH---HHHHHHHHHHHHH
T ss_pred CcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHH--HhCCCCCCCHHHHHHHHhhhhhHH---HHHHHHHHHHHHH
Confidence 489999999999643 589999988876 444322 223 34568888888888876442 3556677788888
Q ss_pred HHHhhccc-----------ccCCeEEecc---CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc------
Q psy15447 353 HSLLSQHK-----------VTQRFLVQGH---RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH------ 412 (457)
Q Consensus 353 ~~~L~~~~-----------~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------ 412 (457)
.+.|++.. ..+++.+..+ ..++++++.+++.. ....++.+.+...|+.++.+..
T Consensus 276 ~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~------~~~~~l~~~~~~~~i~~~~G~~~~li~~ 349 (398)
T 2rfv_A 276 ARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGL------EAGRRMINSVELCLLAVSLGDTETLIQH 349 (398)
T ss_dssp HHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH------HHHHHHHTTCSSSEECSCCSSSSCEEEC
T ss_pred HHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCH------HHHHHHHHhCCcceeccCCCCcceeeec
Confidence 88776621 0122222211 35788888776421 1344566665556777765532
Q ss_pred Ccc--c----------cCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 413 LDQ--E----------AKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 413 ~~~--~----------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
|.. . ....++.+|++++..+++++++++.++|+++
T Consensus 350 ~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 350 PASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp HHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred ccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 110 0 0112589999999999999999999998764
No 126
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.97 E-value=1.2e-28 Score=239.61 Aligned_cols=310 Identities=11% Similarity=0.021 Sum_probs=229.7
Q ss_pred CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhcCCCCEEEEeCc
Q psy15447 95 ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYVKRNDAVFVDEN 172 (457)
Q Consensus 95 ~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~ 172 (457)
.+|++.+++.+++.. . ..+...+...++++++++++|.+ .++++++|++|+..++.++.++||.|++..+
T Consensus 12 ~~~~v~~a~~~~~~~----~----~~~~~~~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 83 (352)
T 1iug_A 12 LHPKALEALARPQLH----H----RTEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVY 83 (352)
T ss_dssp CCHHHHHHHHSCCCC----T----TSHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CCHHHHHHhccCCCC----c----cCHHHHHHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeC
Confidence 468888888776541 1 11223456789999999999976 5677778999999999999999999999999
Q ss_pred ccHHHH--HHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHH
Q psy15447 173 INFAIQ--TGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSK 245 (457)
Q Consensus 173 ~h~~~~--~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~ 245 (457)
.|.+.. ..+...|.++..++.+ |++++++ +++++|++++++|++|.+.|+++|.++|++
T Consensus 84 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~--------------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~ 149 (352)
T 1iug_A 84 GKFSERFYEIALEAGLVVERLDYPYGDTPRPEDVAK--------------EGYAGLLLVHSETSTGALADLPALARAFKE 149 (352)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCC--------------SSCSEEEEESEETTTTEECCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhc--------------cCCcEEEEEEecCCcceecCHHHHHHHHHh
Confidence 888864 3334568888877653 4444433 134688899999999999999999999999
Q ss_pred c--CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcc-cEEEecHHHHHH---------HH----
Q psy15447 246 Y--QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVG-GFCVGSSYIIEH---------HR---- 308 (457)
Q Consensus 246 ~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~g-G~v~~~~~~~~~---------~~---- 308 (457)
| |+++|+||+|++|... +++...++|+++.|++|++ |+.| |+++.++++++. +.
T Consensus 150 ~~~~~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (352)
T 1iug_A 150 KNPEGLVGADMVTSLLVGE---------VALEAMGVDAAASGSQKGLMCPPGLGFVALSPRALERLKPRGYYLDLARELK 220 (352)
T ss_dssp HCTTCEEEEECTTTBTTBC---------CCSGGGTCSEEEEESSSTTCCCSCEEEEEECHHHHHTCCCCSSTTCHHHHHH
T ss_pred hCCCCEEEEECCccccCcc---------eeccccCeeEEEecCcccccCCCceeEEEECHHHHHHhhCCCceeeHHHHHh
Confidence 9 9999999999865431 1111123589999999966 4445 888888887654 11
Q ss_pred hhCCcceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-CCCeEEEEecCCcch
Q psy15447 309 LSGSGYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR-DTPLKYLYLQKSDDE 386 (457)
Q Consensus 309 ~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~ 386 (457)
..... .+.++.++..++++.++++.+++. ++.+++++++++++.+.|++ . |+.+..+. .+.++++.++...
T Consensus 221 ~~~~~-~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~---~-g~~~~~~~~~~~~~~~~~~~~~-- 293 (352)
T 1iug_A 221 AQKEG-ESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEE---G-GLRPVPKRFSPAVAAFYLPEGV-- 293 (352)
T ss_dssp HHTTT-CCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHH---T-TCEESCSSBCTTCEEEECCTTC--
T ss_pred hcccC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---C-CCcccccccCCeEEEEEcCCCC--
Confidence 11111 233456777777778888876543 45778899999999999988 3 77776443 5678888876432
Q ss_pred HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 387 VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 387 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
...++.+.|.++||.+.++..+ ...+++|++++..+|++|+++++++|+++++++.
T Consensus 294 -----~~~~~~~~l~~~gi~v~~~~~~-----~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 349 (352)
T 1iug_A 294 -----PYARVKEAFAQRGAVIAGGQGP-----LKGKVFRLSLMGAYDRYEALGVAGMFREVLEEIL 349 (352)
T ss_dssp -----CHHHHHHHHHTTTEECEECCGG-----GTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred -----CHHHHHHHHHHCCEEEEeCCCc-----cCCCEEEEEccccCCHHHHHHHHHHHHHHHHHhc
Confidence 3457889999999999876531 2357899999998899999999999999988763
No 127
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.97 E-value=5.1e-28 Score=241.84 Aligned_cols=316 Identities=13% Similarity=0.144 Sum_probs=224.7
Q ss_pred ccChHHHHHHHHHHHhhcCCC-----------cEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEE
Q psy15447 121 YGTNVVHLDLENDIASFMGLE-----------ETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQ 189 (457)
Q Consensus 121 ~g~~~~~~~l~~~la~~~g~~-----------~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~ 189 (457)
.|..++++++++.+++..|.+ .+++++++++|+..++.+++++||.|++..++|..+...++..|.++.
T Consensus 78 ~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~ 157 (425)
T 2r2n_A 78 AGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNII 157 (425)
T ss_dssp TCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEE
Confidence 456777788888887777743 445556667899999999999999999999999999999999999888
Q ss_pred EecC----CCHHHHHHHHHhhchhccc-CCCCccEEEEE-ecCCCCCCCCCCh---HHHHHHHHHcCcEEEEEcCccccc
Q psy15447 190 YFKH----NNMQHLEELLRQQDERDTL-NSKVTKKFIIV-EGVYMNSADICPL---KDILSLRSKYQARIFVDESVSFGT 260 (457)
Q Consensus 190 ~~~~----~d~~~le~~l~~~~~~~~~-~~~~~~~~vi~-e~v~~~~G~i~~l---~~i~~l~~~~g~~li~DEa~~~g~ 260 (457)
.++. .|+++|++.+++....... ....++++|++ ++++||+|.+.|. ++|+++|++||+++|+||+|+...
T Consensus 158 ~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~ 237 (425)
T 2r2n_A 158 NVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQ 237 (425)
T ss_dssp EECEETTEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGB
T ss_pred EeCcCCCCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCccccc
Confidence 8764 3789999988642100000 00023456655 6889999999985 499999999999999999998655
Q ss_pred ccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh-
Q psy15447 261 LGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK- 336 (457)
Q Consensus 261 ~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~- 336 (457)
++. ........++.++.+++++|+||++| +| ||+++++++++.+........+ +.+++.++++.++++...
T Consensus 238 ~~g--~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~l~~~l~~~~~~~~~--~~~~~~q~a~~~~l~~~~~ 312 (425)
T 2r2n_A 238 FNK--FRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTL--HPSTFNQLMISQLLHEWGE 312 (425)
T ss_dssp SSS--SCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEHHHHHHHHHHHHTTTC--SSCHHHHHHHHHHHHHHHH
T ss_pred CCC--CCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCHHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHhccc
Confidence 532 11111122223445799999999997 55 9999999998887654322223 347888888877776531
Q ss_pred -----hCcHHHHHHHHHHHHHHHHhhcccccCCe-EEeccCCCCeEEEEecCCcchHHHHHHHHH-HHHHHHHcCeeEec
Q psy15447 337 -----ANPSLLTKLREKCNTMHSLLSQHKVTQRF-LVQGHRDTPLKYLYLQKSDDEVASKKLLQT-ICDMCIQAGFAITC 409 (457)
Q Consensus 337 -----~~~~~~~~l~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~l~~~Gi~v~~ 409 (457)
...+++++++++.+++.+.|++. .+++ .+..+..+.++++.++... ...+ +.+.|.++||.+.+
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~p~~g~~~~~~~~~~~-------~~~~~~~~~l~~~gv~v~p 383 (425)
T 2r2n_A 313 EGFMAHVDRVIDFYSNQKDAILAAADKW--LTGLAEWHVPAAGMFLWIKVKGIN-------DVKELIEEKAVKMGVLMLP 383 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH--CSSSEEECCCSBSSEEEEEETTCS-------CCHHHHHTHHHHTTEECEE
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCeEEeCCCceEEEEEEeCCCC-------CHHHHHHHHHHHCCcEEec
Confidence 12346677888888888888762 1354 4444566788888887532 1224 57788899999998
Q ss_pred cccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 410 PSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 410 ~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+..+........+++||+++. .+++++++++++|++++++.
T Consensus 384 g~~f~~~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 384 GNAFYVDSSAPSPYLRASFSS-ASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp GGGGSSSTTSCCCEEEEECSS-CCHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcCCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHHHh
Confidence 765422101124789999974 59999999999999988653
No 128
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.97 E-value=5.3e-29 Score=242.56 Aligned_cols=330 Identities=12% Similarity=0.153 Sum_probs=231.7
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc-EEEecccHHHHHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE-TALYSFGFSTSASAIA 158 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~-~i~~~sG~~a~~~ai~ 158 (457)
..+|||+++++. ..+|++.+++.+++.. +...|+..+...++++++++++|.+. ++++++|++|+..+++
T Consensus 7 ~~~id~~~~~~~--~~~~~v~~a~~~~~~~-------~~~~~~~~~~~~~l~~~la~~~g~~~~v~~~~~gt~a~~~al~ 77 (356)
T 1v72_A 7 PPALGFSSDNIA--GASPEVAQALVKHSSG-------QAGPYGTDELTAQVKRKFCEIFERDVEVFLVPTGTAANALCLS 77 (356)
T ss_dssp CCCCBCSCGGGC--CCCHHHHHHHHHTTSS-------CCCSTTCSHHHHHHHHHHHHHHTSCCEEEEESCHHHHHHHHHH
T ss_pred CceEeeccCCcc--CCCHHHHHHHHhhccC-------cccccccchHHHHHHHHHHHHhCCCCcEEEeCCccHHHHHHHH
Confidence 468899887553 3579999999887531 12234567788999999999999655 5788899999999999
Q ss_pred hhcCCCCEEEEeCcccHHHHHH--HHhc--CCeEEEecCC----CHHHHHH-HHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447 159 AYVKRNDAVFVDENINFAIQTG--LIAS--RCKVQYFKHN----NMQHLEE-LLRQQDERDTLNSKVTKKFIIVEGVYMN 229 (457)
Q Consensus 159 a~~~~gd~v~~~~~~h~~~~~~--~~~~--g~~~~~~~~~----d~~~le~-~l~~~~~~~~~~~~~~~~~vi~e~v~~~ 229 (457)
+++++||.|++..++|.+.... +... |.+++.++.+ |++++++ .+++.... ...++++|++++++ +
T Consensus 78 ~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~i~~~~~~----~~~~~~~v~~~~~~-~ 152 (356)
T 1v72_A 78 AMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTREKVGDV----HTTQPACVSITQAT-E 152 (356)
T ss_dssp TSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCGGGCCCHHHHHHHTTSSTTCT----TSCEEEEEEEESSC-T
T ss_pred HhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCCCCeEcHHHHHHHhhhcchhh----ccCCceEEEEEcCC-C
Confidence 9999999999999999887765 6666 8888888764 7888888 77541000 01256888888876 4
Q ss_pred CCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc-c-cEEEecHHHH
Q psy15447 230 SADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV-G-GFCVGSSYII 304 (457)
Q Consensus 230 ~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~-g-G~v~~~~~~~ 304 (457)
+|.+.| +++|+++|++||++||+||+|+.+.....+.. ...+++. ...|+++.|+||+ |.+ | |+++++++++
T Consensus 153 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~-~~~d~~~~s~sK~-g~~~G~g~~~~~~~~~ 229 (356)
T 1v72_A 153 VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCS-PAEMTWK-AGVDALSFGATKN-GVLAAEAIVLFNTSLA 229 (356)
T ss_dssp TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCC-TTTTTGG-GTCCEEEECCGGG-TCSSCEEEEESSGGGH
T ss_pred CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCC-HHHhhhh-hcCCEEEEecccC-CCcCccEEEEECHHHH
Confidence 999665 78999999999999999999875422111111 1111111 1447888899999 544 4 5888888888
Q ss_pred HHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecC
Q psy15447 305 EHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQK 382 (457)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~ 382 (457)
+.+..... +.+........++.++++.+++. .+..++++++.+++.+.|++ ++|+++..+..++++++.++
T Consensus 230 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~---~~g~~~~~~~~~~~~~~~~~- 302 (356)
T 1v72_A 230 TEMSYRRK---RAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEG---LGGVEVLGGTEANILFCRLD- 302 (356)
T ss_dssp HHHHHHHH---HTTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTT---CTTEEEESCCCSSEEEEEEC-
T ss_pred hhHHHHhh---ccCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh---CCCcEEccCCCccEEEEEcC-
Confidence 77643211 11111111112233344545432 13567788889999999987 46888765666777777653
Q ss_pred CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 383 SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 383 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
. +++++|.++||.+.++.+ . .+++|++++..+|++|+++++++|++++++.
T Consensus 303 -~----------~~~~~l~~~gi~v~~g~~-----~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 353 (356)
T 1v72_A 303 -S----------AMIDALLKAGFGFYHDRW-----G--PNVVRFVTSFATTAEDVDHLLNQVRLAADRT 353 (356)
T ss_dssp -H----------HHHHHHHHTTCBCBCSSS-----S--TTEEEEECCTTCCHHHHHHHHHHHHHTC---
T ss_pred -H----------HHHHHHHhcCeEEecccc-----C--CCeEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 1 588889999999986542 1 5799999999999999999999999887654
No 129
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.97 E-value=1e-28 Score=244.83 Aligned_cols=340 Identities=14% Similarity=0.099 Sum_probs=231.2
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh--cC---CCcEEEecccHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASF--MG---LEETALYSFGFSTS 153 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~--~g---~~~~i~~~sG~~a~ 153 (457)
|++++||+++.+ ++..+|.+.+++.+++++.+.... ...|+......+|++.++++ .| .+.+++++++++++
T Consensus 32 ~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~~~--~~~y~~~~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al 108 (400)
T 3asa_A 32 QHTVINLSIGDT-TQPLNASVAEAFASSIARLSSPTT--CRGYGPDFGLPALRQKLSEDFYRGFVDAKEIFISDGAKVDL 108 (400)
T ss_dssp TSCCEECSSCCC-CCCCCHHHHHHHHHHHHHHTSSSC--CCCCCCTTCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHHH
T ss_pred CCceEeccCCCC-CCCCCHHHHHHHHHHHhccccccc--ccCCCCCCCCHHHHHHHHHHHHcCCCCHHHEEEccChHHHH
Confidence 678999988765 455689999999999987542110 11122233457889999998 46 34566666777888
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCe-EEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCC
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCK-VQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD 232 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~-~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~ 232 (457)
..++. +.++||.|++..++|..+...++..|.+ +..++.++...+...+++. +++++|++++++||+|.
T Consensus 109 ~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~---------~~~~~v~l~~p~nptG~ 178 (400)
T 3asa_A 109 FRLLS-FFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPED---------THIDILCLCSPNNPTGT 178 (400)
T ss_dssp HHHHH-HHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCTT---------CCCSEEEEESSCTTTCC
T ss_pred HHHHH-HcCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhhc---------cCccEEEEeCCCCCCCC
Confidence 77554 4578999999999999988888888988 8887764211111001110 24567777789999999
Q ss_pred CCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC-CCccEEEecCcccccCcc---cEEEecHHH--
Q psy15447 233 ICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST-EEVDMIIGSLEHALGSVG---GFCVGSSYI-- 303 (457)
Q Consensus 233 i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~-~~~Di~~~s~sK~lg~~g---G~v~~~~~~-- 303 (457)
+.| +++|+++|++||+++|+||+|+....+ +........++. .+.+++++|+||++|.+| ||+++++++
T Consensus 179 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~ 256 (400)
T 3asa_A 179 VLNKDQLRAIVHYAIEHEILILFDAAYSTFISD--PSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTY 256 (400)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCC--TTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBC
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcC--CCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhcc
Confidence 998 668899999999999999999843232 111111122211 133588999999998666 999998877
Q ss_pred -----HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE
Q psy15447 304 -----IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL 378 (457)
Q Consensus 304 -----~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i 378 (457)
++.+........++ +.+++.++++.++++.. ..++.+++++++.+++.+.|++ .|+.+..+..++++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~ 330 (400)
T 3asa_A 257 ADGHFVIQDWERFLSTTFN-GASIPAQEAGVAGLSIL-PQLEAIHYYRENSDLLRKALLA----TGFEVFGGEHAPYLWV 330 (400)
T ss_dssp TTSCBHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHHH----TTCEEEECSSSSEEEE
T ss_pred chhhhHHHHHHHHhccCcc-CCChHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHH----CCCeeeCCCCceEEEE
Confidence 55553222122232 35777777777777654 3456889999999999999998 4777765556788888
Q ss_pred E-ecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 379 Y-LQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 379 ~-~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
. ++... ...++.+.|+++ ||.+.++..+. +...+++||+. ..+++++++++++|+++++..
T Consensus 331 ~~~~~~~-------~~~~~~~~l~~~~gv~v~~g~~f~---~~~~~~iRis~--~~~~e~i~~~l~~l~~~~~~~ 393 (400)
T 3asa_A 331 KPTQANI-------SDRDLFDFFLREYHIAITPGIGFG---RSGSGFVRFSS--LGKREDILAACERLQMAPALQ 393 (400)
T ss_dssp ECCCTTC-------CTTTHHHHHHHHHSEECEEGGGGC---GGGTTCEEEEC--CSCHHHHHHHHHHHHC-----
T ss_pred eccCCCC-------CHHHHHHHHHHhCCEEEeChhHhC---CCCCCEEEEEe--eCCHHHHHHHHHHHHHHHHhh
Confidence 8 65432 223577777754 99998875432 12357899994 579999999999999887654
No 130
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.97 E-value=1.1e-27 Score=244.14 Aligned_cols=343 Identities=11% Similarity=0.070 Sum_probs=237.5
Q ss_pred ChhhHHHHHHHHHhcCC-CCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHHHHHHHhhc-CCCCEEEE
Q psy15447 96 NPDIEKCAIDCIDKNGV-GSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTSASAIAAYV-KRNDAVFV 169 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~~~ai~a~~-~~gd~v~~ 169 (457)
.+++.+++.+++.+... ....+....|..+++.++++.+.+..| .+.++++++|++++..++.+++ ++||.|++
T Consensus 108 p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 187 (500)
T 3tcm_A 108 SADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILV 187 (500)
T ss_dssp CHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEE
T ss_pred CHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEE
Confidence 35577777788876521 333344445666666666666665544 4567888888999999999998 89999999
Q ss_pred eCcccHHHHHHHHhcCCeEEEec-------CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHH
Q psy15447 170 DENINFAIQTGLIASRCKVQYFK-------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDI 239 (457)
Q Consensus 170 ~~~~h~~~~~~~~~~g~~~~~~~-------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i 239 (457)
+.+.|..+...++..|.+++.++ ..|+++|++.+++.... ..++++|++.+++||+|.+.+ +++|
T Consensus 188 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~-----~~~~k~ivl~~p~NPtG~~~s~~~l~~i 262 (500)
T 3tcm_A 188 PIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSR-----GINVRALVVINPGNPTGQVLAEENQYDI 262 (500)
T ss_dssp EESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHT-----TCEEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred eCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhc-----CCCceEEEEECCCCCCcccCCHHHHHHH
Confidence 99999999999999999988876 55899999999864321 124567777788999999988 5677
Q ss_pred HHHHHHcCcEEEEEcCcccccccCCCC--ccc---cccCCCCCC-ccEEEecCcccc-c---CcccEEEe---cHHHHHH
Q psy15447 240 LSLRSKYQARIFVDESVSFGTLGSTGH--GVT---EYFGVSTEE-VDMIIGSLEHAL-G---SVGGFCVG---SSYIIEH 306 (457)
Q Consensus 240 ~~l~~~~g~~li~DEa~~~g~~g~~g~--~~~---~~~~~~~~~-~Di~~~s~sK~l-g---~~gG~v~~---~~~~~~~ 306 (457)
+++|++||+++|+||+|+.+.++.... .+. ..++...++ ..++++|+||++ | .++||+++ ++++++.
T Consensus 263 ~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~ 342 (500)
T 3tcm_A 263 VKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQ 342 (500)
T ss_dssp HHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHH
T ss_pred HHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHH
Confidence 777999999999999998877643211 111 122221122 247789999998 4 45699887 8888888
Q ss_pred HHhhCCcceecCCCcHHHHHHHHHHHH-----------HHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCe
Q psy15447 307 HRLSGSGYCFSASLPPFLAVAANKALH-----------LLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPL 375 (457)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~-----------~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~ 375 (457)
+..... ...+.++...+++..+++ +.++.++++++++++++++.+.|++ ++|+.+..+..+.+
T Consensus 343 l~~~~~---~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~---~~g~~~~~~~g~~~ 416 (500)
T 3tcm_A 343 IYKIAS---VNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNK---LEGITCNEAEGAMY 416 (500)
T ss_dssp HHHHHH---TTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---STTEECCCCCBTTE
T ss_pred HHHHHh---cccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCcEEecCCeEEE
Confidence 765431 112335555555555553 3333456778899999999999988 46888875555556
Q ss_pred EEEEecCCcch-HHHH----HHHHHHH-HHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 376 KYLYLQKSDDE-VASK----KLLQTIC-DMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 376 ~~i~~~~~~~~-~~~~----~~~~~~~-~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
.++.+..+... +... .....++ +.|.++||++.++..+.. ..+.+++|+++. ++++++++++++|+++++
T Consensus 417 ~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~--~~g~~~iRis~~--~~~e~i~~~i~~l~~~~~ 492 (500)
T 3tcm_A 417 VFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQ--VPGTWHFRCTIL--PQEDKIPAVISRFTVFHE 492 (500)
T ss_dssp ECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCC--CTTCCBEEEESC--SCTTTHHHHHHHHHHHHH
T ss_pred EeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCC--CCCCCEEEEEEC--CCHHHHHHHHHHHHHHHH
Confidence 66555433210 0000 0012233 445567999998876532 234568999998 799999999999999988
Q ss_pred HhcC
Q psy15447 450 IAVQ 453 (457)
Q Consensus 450 ~~~~ 453 (457)
++.+
T Consensus 493 ~~~~ 496 (500)
T 3tcm_A 493 AFMS 496 (500)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 131
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.97 E-value=1.2e-28 Score=245.62 Aligned_cols=330 Identities=14% Similarity=0.111 Sum_probs=212.7
Q ss_pred CChhhHHHHHHHHH-hcCCCCCCCCCcccC--hHH-HHHHHHHHHhhcCCCcE-EEecccHHHHHHHHHhhcCCCCEEEE
Q psy15447 95 ENPDIEKCAIDCID-KNGVGSCGPRGFYGT--NVV-HLDLENDIASFMGLEET-ALYSFGFSTSASAIAAYVKRNDAVFV 169 (457)
Q Consensus 95 ~~p~i~~a~~~~l~-~~~~~~~~~~~~~g~--~~~-~~~l~~~la~~~g~~~~-i~~~sG~~a~~~ai~a~~~~gd~v~~ 169 (457)
.+|++.+++.+++. .++.++.+++...+. .+. ....++.+++++|.+.. +++++|++|+..++++++++||.|++
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~v~~~sGs~a~~~a~~~~~~~gd~v~~ 121 (420)
T 3gbx_A 42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTVLG 121 (420)
T ss_dssp CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCceeEecCcHHHHHHHHHHhcCCCCEEEe
Confidence 38999999999984 454344333322221 123 33345788999998766 55889999999999999999999999
Q ss_pred eCcccHHHH-HHH--HhcCC--eEEEec-----CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHH
Q psy15447 170 DENINFAIQ-TGL--IASRC--KVQYFK-----HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDI 239 (457)
Q Consensus 170 ~~~~h~~~~-~~~--~~~g~--~~~~~~-----~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i 239 (457)
..++|.+.. .+. ...+. ....++ ..|++++++.+++. ++++|+++++++ |...|+++|
T Consensus 122 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~----------~~~~v~~~~~~~--~~~~~l~~l 189 (420)
T 3gbx_A 122 MNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEH----------KPKMIIGGFSAY--SGVVDWAKM 189 (420)
T ss_dssp EEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHH----------CCSEEEECCTTC--CSCCCHHHH
T ss_pred cchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhc----------CCeEEEEecCcc--CCccCHHHH
Confidence 999998743 222 22222 333332 26899999999752 245777765544 458899999
Q ss_pred HHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEecH---HHHHHHHhhCCcce
Q psy15447 240 LSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGSS---YIIEHHRLSGSGYC 315 (457)
Q Consensus 240 ~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~~---~~~~~~~~~~~~~~ 315 (457)
+++|++||++||+||+|+.|..+. +.. ... ...+|+++.|+||++ |+.||++++++ ++.+.+.....+..
T Consensus 190 ~~l~~~~~~~li~De~~~~~~~~~-~~~----~~~-~~~~di~~~s~sK~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~ 263 (420)
T 3gbx_A 190 REIADSIGAYLFVDMAHVAGLIAA-GVY----PNP-VPHAHVVTTTTHKTLAGPRGGLILAKGGDEELYKKLNSAVFPSA 263 (420)
T ss_dssp HHHHHHTTCEEEEECTTTHHHHHT-TSS----CCS-TTTSSEEEEESSGGGCSCSCEEEEESSCCHHHHHHHHHHHC---
T ss_pred HHHHHHcCCEEEEECCcchhceec-ccC----Ccc-cccCCEEEeecccCCCCCCceEEEEcCCcHHHHHHhhhhcCCCC
Confidence 999999999999999987665432 111 111 123689999999999 56789999987 77777765433333
Q ss_pred ecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-CCCCeEEEEecCCcchHHHHHHH
Q psy15447 316 FSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-RDTPLKYLYLQKSDDEVASKKLL 393 (457)
Q Consensus 316 ~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~ 393 (457)
+++..++..++++.+....+++ .++++++++++.+++.+.|++ .|+.+... ..++++++.+..... ..
T Consensus 264 ~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~~~~~------~~ 333 (420)
T 3gbx_A 264 QGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLN----RGYKVVSGGTENHLFLLDLVDKNL------TG 333 (420)
T ss_dssp -CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHH----TTCEEGGGSCSSSEEEEECGGGTC------CH
T ss_pred CCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHh----cCCeeccCCCCCeEEEEEcCCCCC------CH
Confidence 3332233333333232232222 245688899999999999988 67877543 457788887754210 34
Q ss_pred HHHHHHHHHcCeeEeccccCcc-ccCCCCCeEEEEecCC----CCHHHHHHHHHHHHHHHHHhc
Q psy15447 394 QTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCNIS----HTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 394 ~~~~~~l~~~Gi~v~~~~~~~~-~~~~~~~~lRi~~~~~----~t~edi~~~~~~l~~~~~~~~ 452 (457)
..+.+.|.++||++.+...|.. ..+...+.+||+++.. ++++|+++++++|+++++...
T Consensus 334 ~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~ 397 (420)
T 3gbx_A 334 KEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNIN 397 (420)
T ss_dssp HHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhCcc
Confidence 5677888889999987433321 1122345699998754 568999999999999887643
No 132
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.97 E-value=8e-29 Score=245.97 Aligned_cols=336 Identities=12% Similarity=0.078 Sum_probs=236.0
Q ss_pred eeeEEeecC-CccCCCCChhhHHHHHHHHHh-cCCCCCCCCCcccChHHHHHHH----HHHHhhcCCCcE-EEecccHHH
Q psy15447 80 IPCINFATH-NYLSFVENPDIEKCAIDCIDK-NGVGSCGPRGFYGTNVVHLDLE----NDIASFMGLEET-ALYSFGFST 152 (457)
Q Consensus 80 ~~~id~~s~-~~l~~~~~p~i~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~~-i~~~sG~~a 152 (457)
++++|+.++ +++ +|++.+++.+++.+ +..++..++...|.. ....++ +++++++|.+.. +++++|++|
T Consensus 23 ~~~i~~~~~~~~~----~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~-~~~~~e~~ar~~la~~~g~~~~~i~~~sGt~a 97 (407)
T 2dkj_A 23 REGLELIASENFV----SKQVREAVGSVLTNKYAEGYPGARYYGGCE-VIDRVESLAIERAKALFGAAWANVQPHSGSQA 97 (407)
T ss_dssp HTSEECCTTCCCC----CHHHHHHHTSGGGGCCCCEETTEESSSCCH-HHHHHHHHHHHHHHHHHTCSEEECCCSSHHHH
T ss_pred hcceeeccCCCCC----CHHHHHHHHhhhhcCcccCCCcccccCCch-HHHHHHHHHHHHHHHHhCCCcceEEecchHHH
Confidence 568898765 343 79999999999875 443333333222332 222333 589999998866 667899999
Q ss_pred HHHHHHhhcCCCCEEEEeCcccHHHH---HHHHhcCC--eEEEec------CCCHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447 153 SASAIAAYVKRNDAVFVDENINFAIQ---TGLIASRC--KVQYFK------HNNMQHLEELLRQQDERDTLNSKVTKKFI 221 (457)
Q Consensus 153 ~~~ai~a~~~~gd~v~~~~~~h~~~~---~~~~~~g~--~~~~~~------~~d~~~le~~l~~~~~~~~~~~~~~~~~v 221 (457)
+..+++++.++||.|++..+.|.++. ..+...|. ....++ ..|++++++.+++. ++++|
T Consensus 98 ~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~----------~~~~v 167 (407)
T 2dkj_A 98 NMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEH----------RPKVI 167 (407)
T ss_dssp HHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHH----------CCSEE
T ss_pred HHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhc----------CCeEE
Confidence 99999999999999999999987662 22333333 334442 24799999998741 23566
Q ss_pred EEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-CcccEEEec
Q psy15447 222 IVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVGS 300 (457)
Q Consensus 222 i~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~ 300 (457)
++..+++ |.+.|+++|+++|++||+++|+||+|+.|.... +... . .. +..|+++.|+||+++ +.||+++++
T Consensus 168 ~~~~p~~--~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~-~~~~-~--~~--~~~di~~~s~sK~l~g~~~G~~~~~ 239 (407)
T 2dkj_A 168 VAGASAY--PRFWDFKAFREIADEVGAYLVVDMAHFAGLVAA-GLHP-N--PL--PYAHVVTSTTHKTLRGPRGGLILSN 239 (407)
T ss_dssp EECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHT-TCSC-C--CT--TTCSEEEEESSGGGCCCSCEEEEES
T ss_pred EEecccc--CCCCCHHHHHHHHHHcCCEEEEEcccccccccc-CccC-C--cc--ccccEEEEeccccCCCCCceEEEEC
Confidence 6644444 377889999999999999999999998765432 1111 0 01 125899999999994 678999999
Q ss_pred -HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-CCCCeE
Q psy15447 301 -SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-RDTPLK 376 (457)
Q Consensus 301 -~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~ 376 (457)
+++++.+......+.. ++.++..++++.++++.+.. .++++++++++.+++.+.|++ .|+++..+ ..++++
T Consensus 240 ~~~~~~~l~~~~~~~~~-~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~ 314 (407)
T 2dkj_A 240 DPELGKRIDKLIFPGIQ-GGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELAR----RGYRIVTGGTDNHLF 314 (407)
T ss_dssp CHHHHHHHHHHHTTTTC-SSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH----TTCEEGGGSCSSSEE
T ss_pred CHHHHHHHHhhhccccc-CCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh----CCceeecCCCCceEE
Confidence 7888887654333322 23566666677777776532 246788999999999999998 37777643 467888
Q ss_pred EEEecCC-cchHHHHHHHHHHHHHHHHcCeeEeccccCccc-cCCCCCeEEEEecC----CCCHHHHHHHHHHHHHHHHH
Q psy15447 377 YLYLQKS-DDEVASKKLLQTICDMCIQAGFAITCPSHLDQE-AKKQKPSIRITCNI----SHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 377 ~i~~~~~-~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~-~~~~~~~lRi~~~~----~~t~edi~~~~~~l~~~~~~ 450 (457)
++.++.. . ...++.+.|.++||.+.++..|... .+..++.+|++++. .+|++|+++++++|+++++.
T Consensus 315 ~~~~~~~~~-------~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 315 LVDLRPKGL-------TGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp EEECGGGTC-------CHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred EEECcccCC-------CHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 8887641 1 2456888899999999876543110 11235689999976 37999999999999999877
No 133
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.96 E-value=1.2e-28 Score=239.55 Aligned_cols=311 Identities=13% Similarity=0.079 Sum_probs=227.1
Q ss_pred CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC---c-EEEecccHHHHHHHHHhhcCCCCEEEEe
Q psy15447 95 ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE---E-TALYSFGFSTSASAIAAYVKRNDAVFVD 170 (457)
Q Consensus 95 ~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~-~i~~~sG~~a~~~ai~a~~~~gd~v~~~ 170 (457)
.+|++.+++.+++.. .. .+...+...++++.+++++|.+ . ++++++|++|+..++.++.+ |.|++.
T Consensus 11 ~~~~v~~a~~~~~~~----~~----~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~~ 80 (353)
T 2yrr_A 11 IPERVQKALLRPMRG----HL----DPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR--GPVLVL 80 (353)
T ss_dssp CCHHHHGGGGSCCCC----TT----CHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEEE
T ss_pred CCHHHHHHHhccccc----cc----CHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEEE
Confidence 467888877766543 10 1123456889999999999973 3 56667888999999998876 667777
Q ss_pred CcccHHH--HHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHH
Q psy15447 171 ENINFAI--QTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLR 243 (457)
Q Consensus 171 ~~~h~~~--~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~ 243 (457)
.+.|.+. ...++..|.++..++. .|++++++.+++. ++++|++++++|++|.+.|+++|.++|
T Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~----------~~~~v~~~~~~nptG~~~~~~~i~~l~ 150 (353)
T 2yrr_A 81 VNGAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRR----------RYRMVALVHGETSTGVLNPAEAIGALA 150 (353)
T ss_dssp ECSHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHS----------CCSEEEEESEETTTTEECCHHHHHHHH
T ss_pred cCCCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhC----------CCCEEEEEccCCCcceecCHHHHHHHH
Confidence 7666653 3445677888887774 4789999988641 346888999999999999999999999
Q ss_pred HHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-Ccc-cEEEecHHHHHHHHh------------
Q psy15447 244 SKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVG-GFCVGSSYIIEHHRL------------ 309 (457)
Q Consensus 244 ~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~g-G~v~~~~~~~~~~~~------------ 309 (457)
++||+++|+||+|++|... .. ...+ ++|+++.|++|+++ +.| |++++++++++.++.
T Consensus 151 ~~~~~~li~D~a~~~~~~~---~~-~~~~-----~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~~~~~~~~~~~~~ 221 (353)
T 2yrr_A 151 KEAGALFFLDAVTTLGMLP---FS-MRAM-----GVDYAFTGSQKCLSAPPGLAPIAASLEARKAFTGKRGWYLDLARVA 221 (353)
T ss_dssp HHHTCEEEEECTTTTTTSC---CC-HHHH-----TCSEEECCTTSTTCCCSSCEEEEECHHHHHHCCCCSCSTTCHHHHH
T ss_pred HHcCCeEEEEcCccccccc---cc-cccc-----CceEEEecCcccccCCCceEEEEECHHHHHHhccCCCccccHHHHh
Confidence 9999999999999865431 11 1112 24899999999774 344 899999988876541
Q ss_pred -hCCcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC--CCCeEEEEecCCc
Q psy15447 310 -SGSGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR--DTPLKYLYLQKSD 384 (457)
Q Consensus 310 -~~~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~--~~~~~~i~~~~~~ 384 (457)
......+.++.++..++++.++++.+.+. ++.+++++++++++.+.|++ .|+++..+. .+.++++.++...
T Consensus 222 ~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~~~~~ 297 (353)
T 2yrr_A 222 EHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKA----RGFRPYPKASPLPTVLVVRPPEGV 297 (353)
T ss_dssp HHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCEESCSSSBCTTEEEEECCTTC
T ss_pred hhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH----CCCccccCccCCCeEEEEECCCCC
Confidence 00011233455777777777788776432 45788899999999999988 377775433 4566677775332
Q ss_pred chHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHH-HHHHHHHHHHHH
Q psy15447 385 DEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMN-SLIETLCKSHDI 450 (457)
Q Consensus 385 ~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~-~~~~~l~~~~~~ 450 (457)
...++.+.|.++||.+.++..+ ..++++|++++..+|++|++ +++++|++++++
T Consensus 298 -------~~~~~~~~l~~~gi~v~~g~~~-----~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 298 -------DADRLVRALYAEGVAVAGGIGP-----TRGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp -------CHHHHHHHHHHTTEECEECCGG-----GTTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred -------CHHHHHHHHHHCCEEEeCCccc-----cCCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 3457899999999999876532 23578999998888999999 999999998764
No 134
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.96 E-value=6.4e-28 Score=244.03 Aligned_cols=343 Identities=12% Similarity=0.079 Sum_probs=232.2
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAI 157 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai 157 (457)
.|++|+||.++... +++.+++.+++.. +. ..|+..+...+|+++++++++.+.+++++||++|+..++
T Consensus 41 ~g~~ylD~~~~~~~-----~~v~~a~~~~~~~-~~------~~y~~~~~~~~l~~~la~~~~~~~v~~t~ggt~A~~~al 108 (467)
T 1ax4_A 41 SSAVYIDLLTDSGT-----NAMSDHQWAAMIT-GD------EAYAGSRNYYDLKDKAKELFNYDYIIPAHQGRGAENILF 108 (467)
T ss_dssp GGGCSEECSCSSSC-----CCEEHHHHHHHHT-CC------CCSSSCHHHHHHHHHHHHHHCCCEEEEESSHHHHHHHHH
T ss_pred CCceeeecccCcCC-----HHHHHHHHHHHhh-cc------cccccCccHHHHHHHHHHHcCCCcEEEcCCcHHHHHHHH
Confidence 57889999764322 7888888888764 21 123345677899999999999999999999999999999
Q ss_pred HhhcC----CCCE---EEEeCcccHHHHHHHHhcCCeEEEec---------------CCCHHHHHHHHHhhchhcccCCC
Q psy15447 158 AAYVK----RNDA---VFVDENINFAIQTGLIASRCKVQYFK---------------HNNMQHLEELLRQQDERDTLNSK 215 (457)
Q Consensus 158 ~a~~~----~gd~---v~~~~~~h~~~~~~~~~~g~~~~~~~---------------~~d~~~le~~l~~~~~~~~~~~~ 215 (457)
+++++ +||. |++..+.|..+...+...|..+...+ ..|+++|++.+++.. .
T Consensus 109 ~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~-------~ 181 (467)
T 1ax4_A 109 PVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG-------A 181 (467)
T ss_dssp HHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC-------G
T ss_pred HHHHHhhccCCCccceEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcC-------C
Confidence 99988 9997 77775445666777788887766432 138999999997532 1
Q ss_pred CccEEEEEecCCCCC-CCCCC---hHHHHHHHHHcCcEEEEEcCccc-ccc-------cCCCCcccccc-CCCCCCccEE
Q psy15447 216 VTKKFIIVEGVYMNS-ADICP---LKDILSLRSKYQARIFVDESVSF-GTL-------GSTGHGVTEYF-GVSTEEVDMI 282 (457)
Q Consensus 216 ~~~~~vi~e~v~~~~-G~i~~---l~~i~~l~~~~g~~li~DEa~~~-g~~-------g~~g~~~~~~~-~~~~~~~Di~ 282 (457)
+++++|++++++|++ |.+.+ +++|+++|++||++||+||++.+ +.+ +..+....... +. ...+|++
T Consensus 182 ~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~ 260 (467)
T 1ax4_A 182 DNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDM-YKYADAL 260 (467)
T ss_dssp GGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHH-GGGCSEE
T ss_pred CCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhh-ccccceE
Confidence 257899999999998 77766 67999999999999999999765 222 22111111100 00 0234788
Q ss_pred EecCcccccCc-ccEEEec-H-HHHHHHHhhC----CcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Q psy15447 283 IGSLEHALGSV-GGFCVGS-S-YIIEHHRLSG----SGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSL 355 (457)
Q Consensus 283 ~~s~sK~lg~~-gG~v~~~-~-~~~~~~~~~~----~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~ 355 (457)
+.|+||++|.+ ||+++++ + ++++.+.... ....++ ..+....++...+++...+ ++..++..++.+++.+.
T Consensus 261 ~~s~sK~~g~~~Gg~~~~~d~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~ 338 (467)
T 1ax4_A 261 TMSAKKDPLLNIGGLVAIRDNEEIFTLARQRCVPMEGFVTYG-GLAGRDMAAMVQGLEEGTE-EEYLHYRIGQVKYLGDR 338 (467)
T ss_dssp EEETTSTTCCSSCEEEEESSCHHHHHHHHHHHHHHTCSTTTT-TCCHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHH
T ss_pred EEeccccCCCCcceEEEeCCHHHHHHHHHhhccccccccccC-CccchHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHH
Confidence 89999999876 7888887 6 7777654321 111122 1232222222224544322 23455556788899999
Q ss_pred hhcccccCCeEEeccCCCCeEEEE-------ecCCcchHHHHHHHHHHHHHH-HHcCeeEec-cccCccc-------cCC
Q psy15447 356 LSQHKVTQRFLVQGHRDTPLKYLY-------LQKSDDEVASKKLLQTICDMC-IQAGFAITC-PSHLDQE-------AKK 419 (457)
Q Consensus 356 L~~~~~~~~~~~~~~~~~~~~~i~-------~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~-~~~~~~~-------~~~ 419 (457)
|++ .++++..+..+..+++. +.... ....+++++| .++||.+.+ +.+.... .+.
T Consensus 339 L~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~ 408 (467)
T 1ax4_A 339 LRE----AGIPIQYPTGGHAVFVDCKKLVPQIPGDQ------FPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHA 408 (467)
T ss_dssp HHH----TTCCBCSSCCSSEEEEESTTTCTTSCGGG------CHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCC
T ss_pred HHh----CCCCcccCCCceEEEEehhhhccccccCC------CCHHHHHHHHHHhcCceeeecCcccccccccccccccc
Confidence 987 56666555667777776 22110 0356788998 888999987 3221000 011
Q ss_pred CCCeEEEEec-CCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 420 QKPSIRITCN-ISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 420 ~~~~lRi~~~-~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
..+++||+++ ..+|++|+++++++|+++++.+.
T Consensus 409 ~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~~ 442 (467)
T 1ax4_A 409 DMEFMRLTIARRVYTNDHMDYIADALIGLKEKFA 442 (467)
T ss_dssp SCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHHT
T ss_pred ccceEEEecccccCCHHHHHHHHHHHHHHHHhhh
Confidence 2479999998 45899999999999999887754
No 135
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.96 E-value=1.3e-27 Score=233.08 Aligned_cols=278 Identities=13% Similarity=0.101 Sum_probs=207.5
Q ss_pred HHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhcCCC-CEEEEeCcccHHHHHHHHhcCCeEEEecC-----CCHHH
Q psy15447 127 HLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYVKRN-DAVFVDENINFAIQTGLIASRCKVQYFKH-----NNMQH 198 (457)
Q Consensus 127 ~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~~~g-d~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~ 198 (457)
..++++.+|+++|.+ .++++++|++++..++++++++| |.|++..++|..+...++..|.++..++. .|+++
T Consensus 60 ~~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~ 139 (356)
T 1fg7_A 60 PKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQG 139 (356)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHH
T ss_pred HHHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCCCCCCCCHHH
Confidence 578999999999864 56677777899999999999999 99999999999988888888999888875 35666
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChH---HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLK---DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVS 275 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~---~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~ 275 (457)
+++.++ ++++|++++++||+|.+.|.+ +|+++|+ ||+++|+||+|+.+..+ ..+....+.
T Consensus 140 l~~~i~------------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~---~~~~~~~~~- 202 (356)
T 1fg7_A 140 ISDKLD------------GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQ---ASLAGWLAE- 202 (356)
T ss_dssp HHTSCT------------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGG---GCSGGGTTT-
T ss_pred HHHHhc------------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCC---CcHHHHHhh-
Confidence 665542 246777789999999999855 5555566 99999999999854311 112222121
Q ss_pred CCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHH
Q psy15447 276 TEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA--NPSLLTKLREKCN 350 (457)
Q Consensus 276 ~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~ 350 (457)
.+.++++.|+||++|.+| ||+++++++++.++.....+ +.+++.++++.++++.... .++.+++++++++
T Consensus 203 -~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 277 (356)
T 1fg7_A 203 -YPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAPY----PLSTPVADIAAQALSPQGIVAMRERVAQIIAERE 277 (356)
T ss_dssp -CTTEEEEEESSSTTCCGGGCCEEEEECHHHHHHHHHHSCSS----CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCEEEEecchHhhcCchhhhEEEEeCHHHHHHHHHhcCCC----CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 234788999999998665 99999999999887654433 4578888888887754322 3346778888999
Q ss_pred HHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEec-cccCccccCCCCCeEEEEec
Q psy15447 351 TMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITC-PSHLDQEAKKQKPSIRITCN 429 (457)
Q Consensus 351 ~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~-~~~~~~~~~~~~~~lRi~~~ 429 (457)
++.+.|++ ..++....++.++++++.++ + ..++.++|.++||.+++ +.++ ...+++|++++
T Consensus 278 ~l~~~L~~---~~~~~~~~~~~~~~~~~~~~-~---------~~~l~~~L~~~gI~v~~~g~~~-----~~~~~iRis~~ 339 (356)
T 1fg7_A 278 YLIAALKE---IPCVEQVFDSETNYILARFK-A---------SSAVFKSLWDQGIILRDQNKQP-----SLSGCLRITVG 339 (356)
T ss_dssp HHHHHHHH---STTEEEECCCSSSEEEEEET-T---------HHHHHHHHHHTTEECEECTTST-----TCTTEEEEECC
T ss_pred HHHHHHHh---CCCceEECCCCCeEEEEECC-C---------HHHHHHHHHHCCEEEEECCCCC-----CCCCeEEEEeC
Confidence 99999988 33432333556788888775 2 24688899999999988 5442 22468999986
Q ss_pred CCCCHHHHHHHHHHHHHH
Q psy15447 430 ISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 430 ~~~t~edi~~~~~~l~~~ 447 (457)
+++|+++++++|+++
T Consensus 340 ---~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 340 ---TREESQRVIDALRAE 354 (356)
T ss_dssp ---CHHHHHHHHHHHHTC
T ss_pred ---CHHHHHHHHHHHHhh
Confidence 699999999998753
No 136
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=1.3e-27 Score=238.65 Aligned_cols=339 Identities=13% Similarity=0.094 Sum_probs=217.2
Q ss_pred eeEEeecC-CccCCCCChhhHHHHHHHHH-hcCCCCCCCCCcccC--hHHHHHHH-HHHHhhcCCCcEE-EecccHHHHH
Q psy15447 81 PCINFATH-NYLSFVENPDIEKCAIDCID-KNGVGSCGPRGFYGT--NVVHLDLE-NDIASFMGLEETA-LYSFGFSTSA 154 (457)
Q Consensus 81 ~~id~~s~-~~l~~~~~p~i~~a~~~~l~-~~~~~~~~~~~~~g~--~~~~~~l~-~~la~~~g~~~~i-~~~sG~~a~~ 154 (457)
+.+++.++ +++ +|++.+++.+++. .|+.++.+++...+. .+...+++ +.+++++|.+... ++++|++|+.
T Consensus 33 ~~i~l~~~~~~~----~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~v~~~~Gs~a~~ 108 (425)
T 3ecd_A 33 SQVELIASENIV----SRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFNAGHANVQPHSGAQANG 108 (425)
T ss_dssp HSEECCTTCCCC----CHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHTCSEEECCCSSHHHHHH
T ss_pred cceeeecccCCC----CHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhCCCCceeecCchHHHHH
Confidence 45666544 442 8999999999984 554444333332222 23445554 7788999988874 4889999999
Q ss_pred HHHHhhcCCCCEEEEeCcccHH-HHHHHH--hcCC--eEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447 155 SAIAAYVKRNDAVFVDENINFA-IQTGLI--ASRC--KVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIV 223 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~-~~~~~~--~~g~--~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~ 223 (457)
.++++++++||.|++..+.|.+ ...+.. ..+. ....++.+ |++++++.+++. ++++|++
T Consensus 109 ~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~----------~~~~v~~ 178 (425)
T 3ecd_A 109 AVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQH----------KPSLIIA 178 (425)
T ss_dssp HHHHHHCCTTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHH----------CCSEEEE
T ss_pred HHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhc----------CCcEEEE
Confidence 9999999999999999999877 223322 3343 44455433 899999998742 3457777
Q ss_pred ecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-CcccEEEec-H
Q psy15447 224 EGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVGS-S 301 (457)
Q Consensus 224 e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~-~ 301 (457)
+++++ |...++++|+++|++||++||+||+|+.|.+.. +.. .+.. ..+|++++|+||+++ +.||+++++ +
T Consensus 179 ~~~~~--~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~-~~~----~~~~-~~~di~~~s~sK~l~g~~~g~~~~~~~ 250 (425)
T 3ecd_A 179 GFSAY--PRKLDFARFRAIADSVGAKLMVDMAHIAGVIAA-GRH----ANPV-EHAHVVTSTTHKTLRGPRGGFVLTNDE 250 (425)
T ss_dssp ECSCC--CSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHT-TSS----CCGG-GTCSEEEEESSGGGCCCSCEEEEESCH
T ss_pred ccccC--CCcCCHHHHHHHHHHcCCEEEEECcChHhhhhc-ccc----cCch-hcCcEEEecCCcccCCCCcEEEEeCCH
Confidence 75554 678899999999999999999999987665432 211 1111 125899999999994 568999888 5
Q ss_pred HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-CCCCeEEEE
Q psy15447 302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-RDTPLKYLY 379 (457)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~i~ 379 (457)
.+.+.+.........++..++..++++.+....+++ .++++++++++.+++.+.|++ .|+++..+ ..++++++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~ 326 (425)
T 3ecd_A 251 EIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKA----GGVDLVTGGTDNHLLLVD 326 (425)
T ss_dssp HHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH----TTCEEGGGSCSSSEEEEE
T ss_pred HHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh----CCCeeccCCCCceEEEEE
Confidence 676666543322222222333443333333333322 245778899999999999988 67777643 457788887
Q ss_pred ecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc-ccCCCCCeEEEEec----CCCCHHHHHHHHHHHHHHHHHh
Q psy15447 380 LQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCN----ISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-~~~~~~~~lRi~~~----~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+..... ....+.+.|.++||.+.+...|.. ..+...+.+|++++ ..++++++++++++|+++++..
T Consensus 327 ~~~~~~------~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 327 LRPKGL------KGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp CGGGTC------CHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCC------CHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence 753210 345677888889999985443321 01223468999954 4456999999999999998876
No 137
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.96 E-value=3.7e-29 Score=247.83 Aligned_cols=335 Identities=14% Similarity=0.093 Sum_probs=219.9
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCC-CCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSC-GPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSA 154 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~-~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~ 154 (457)
++.-|+|++++. ..+|++.+++.+++.+....+. .....++..+...++++++++++|.+ .++++++|++|+.
T Consensus 19 ~~~iyld~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~ 94 (400)
T 3vax_A 19 SHMTYLDAAATT----RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNN 94 (400)
T ss_dssp ---CCCCCCCCS----SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHH
T ss_pred CCcEEecCCCCC----CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHH
Confidence 456678877653 2478999999999976321111 11111223566889999999999975 6778888899999
Q ss_pred HHHHhhc----CCCC-EEEEeCcccHHHHHHHHh---cCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447 155 SAIAAYV----KRND-AVFVDENINFAIQTGLIA---SRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFI 221 (457)
Q Consensus 155 ~ai~a~~----~~gd-~v~~~~~~h~~~~~~~~~---~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~v 221 (457)
.++.++. ++|| .|+++.+.|+++...+.. .|.++..++.+ |++++++.++ +++++|
T Consensus 95 ~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-----------~~~~~v 163 (400)
T 3vax_A 95 IALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLR-----------PDTLLV 163 (400)
T ss_dssp HHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCC-----------TTEEEE
T ss_pred HHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcC-----------CCceEE
Confidence 9999987 8999 999999999887665544 58888888765 7888887764 246899
Q ss_pred EEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEE-e
Q psy15447 222 IVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCV-G 299 (457)
Q Consensus 222 i~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~-~ 299 (457)
++++++|++|.+.|+++|.++|++||+++|+||+|++|.... ++... +|+++.|++|.+|+.| |+++ .
T Consensus 164 ~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~---------~~~~~-~d~~~~s~~K~~g~~g~g~~~~~ 233 (400)
T 3vax_A 164 SLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPG---------DLTTP-IDMISISGHKIGAPKGVGALVTR 233 (400)
T ss_dssp ECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGG---------GGGSC-CSEEEEETGGGTSCSSCEEEEEC
T ss_pred EEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCc---------Chhhc-CcEEEEeHHHhCCCCceEEEEEe
Confidence 999999999999999999999999999999999998654321 11112 5899999999777654 6766 6
Q ss_pred cH-HHH---HHHHhhCC----c-ceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEec
Q psy15447 300 SS-YII---EHHRLSGS----G-YCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQG 369 (457)
Q Consensus 300 ~~-~~~---~~~~~~~~----~-~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~ 369 (457)
++ .+. ..+..... . ....++.++..++++.++++.+.+. ++.+++++++++++.+.|+. +++.+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~ 309 (400)
T 3vax_A 234 RREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLAS----TSFQVNG 309 (400)
T ss_dssp BCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHTT----TTCEECS
T ss_pred cchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhCC----CCEEEeC
Confidence 55 111 11111110 0 0112345777777777788776543 56788899999999999984 7887764
Q ss_pred cCC---CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccc----------cCCC----CCeEEEEe-cCC
Q psy15447 370 HRD---TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQE----------AKKQ----KPSIRITC-NIS 431 (457)
Q Consensus 370 ~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~----------~~~~----~~~lRi~~-~~~ 431 (457)
+.. +.++.+.+... ...++.+.|. +||.++++..+... .... .+++||++ +..
T Consensus 310 ~~~~~~~~~~~~~~~~~--------~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~ 380 (400)
T 3vax_A 310 DQDHVVPHILNLSFEDV--------DAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQ 380 (400)
T ss_dssp CTTSBCTTEEEEECTTC--------CHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC-
T ss_pred CcccCCCCEEEEEeCCC--------CHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCC
Confidence 433 35677766543 3457888999 99988775432110 0011 48999999 999
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy15447 432 HTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 432 ~t~edi~~~~~~l~~~~~~ 450 (457)
+|++|+++++++|+++++.
T Consensus 381 ~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 381 ATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp -------------------
T ss_pred CCHHHHHHHHHHHHHHhcc
Confidence 9999999999999987653
No 138
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.96 E-value=5.3e-28 Score=237.49 Aligned_cols=311 Identities=10% Similarity=-0.008 Sum_probs=220.6
Q ss_pred ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC---cEEE-ecccHHHHHHHHHhhcCCCCEEEEeC
Q psy15447 96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE---ETAL-YSFGFSTSASAIAAYVKRNDAVFVDE 171 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~-~~sG~~a~~~ai~a~~~~gd~v~~~~ 171 (457)
+|++.+++.+++.. .. + ....+...++++++++++|.+ ..++ ++||++|+..++++++++||.|++..
T Consensus 31 ~~~v~~a~~~~~~~----~~-~---~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~ 102 (376)
T 3f0h_A 31 SEEVRAIGAEQVPY----FR-T---TEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVID 102 (376)
T ss_dssp CHHHHHHHTSCCCC----CS-S---HHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred cHHHHHHhcCCCCC----CC-C---HHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEe
Confidence 57788777665421 11 1 123467788999999999865 4555 46779999999999999999888776
Q ss_pred c-ccHHHH-HHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHH
Q psy15447 172 N-INFAIQ-TGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS 244 (457)
Q Consensus 172 ~-~h~~~~-~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~ 244 (457)
+ +|+... ......|.++..++. .|++++++.+. +++++|++++++|++|.+.|+++|+++|+
T Consensus 103 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~-----------~~~~~v~~~~~~nptG~~~~l~~i~~l~~ 171 (376)
T 3f0h_A 103 GGSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDN-----------QNFTGLLVNVDETSTAVLYDTMMIGEFCK 171 (376)
T ss_dssp SSHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTT-----------SCCCEEEEESEETTTTEECCHHHHHHHHH
T ss_pred CChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhc-----------cCceEEEEecccCCcceecCHHHHHHHHH
Confidence 5 444322 345566777776653 37888877542 35678889999999999999999999999
Q ss_pred HcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-Ccc-cEEEecHHHHHHHHhhCC-cc-------
Q psy15447 245 KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVG-GFCVGSSYIIEHHRLSGS-GY------- 314 (457)
Q Consensus 245 ~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~g-G~v~~~~~~~~~~~~~~~-~~------- 314 (457)
+||+++|+||+++++... .-.+.+ ++|+++.|++|+++ +.| |+++.++++++.+..... ++
T Consensus 172 ~~~~~li~D~~~~~~~~~----~~~~~~-----~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (376)
T 3f0h_A 172 KNNMFFVCDCVSAFLADP----FNMNEC-----GADVMITGSQKVLACPPGISVIVLAPRGVERVEKSKVRTMYFDLKDA 242 (376)
T ss_dssp HTTCEEEEECTTTTTTSC----CCHHHH-----TCSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTCCCCCSTTCHHHH
T ss_pred HcCCEEEEEcCccccCcc----cccccc-----CccEEEecCcccccCCCceEEEEECHHHHHHhhcCCCCceeecHHHH
Confidence 999999999999865331 011122 34799999999997 444 788999998888764221 11
Q ss_pred -------eecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCc
Q psy15447 315 -------CFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD 384 (457)
Q Consensus 315 -------~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 384 (457)
....+.+...++++.++++.+.+. ++.+++.+++.+++.+.|++ .++.+..+.....+........
T Consensus 243 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~~~ 318 (376)
T 3f0h_A 243 LKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKD----LPFELVSESPANGVTSVHPTTA 318 (376)
T ss_dssp HHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT----SSEEECCSSBBTTEEEEEESSS
T ss_pred HhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH----cCCccCccccCceEEEEeCCCC
Confidence 012234555556677778776654 45778888899999999988 5676654333333322222222
Q ss_pred chHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 385 DEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 385 ~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
...++.+.|.++ ||.++++.. +...+++|++++..+|++|+++++++|++++++
T Consensus 319 -------~~~~l~~~l~~~~gi~v~~g~~-----~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 319 -------NAYDIFLKLKDEYGIWICPNGG-----EMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp -------CHHHHHHHHHHHSSEECEECCG-----GGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred -------CHHHHHHHHHHhCCEEEecCcc-----ccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 356789999998 999987632 123579999999999999999999999998753
No 139
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.96 E-value=2.3e-28 Score=247.16 Aligned_cols=336 Identities=12% Similarity=0.064 Sum_probs=238.1
Q ss_pred CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCC-CCCC-CcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHH
Q psy15447 79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGS-CGPR-GFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSA 154 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~-~~~~-~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~ 154 (457)
++.++.|.++. ++.. ++.+.+++.+++++|+... .+.. ...+..+...++++++++++|.+ .+++++++++++.
T Consensus 65 ~~~~iyld~~~-~g~~-p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~ 142 (465)
T 3e9k_A 65 DENAIYFLGNS-LGLQ-PKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEKEIALMNALTVNLH 142 (465)
T ss_dssp TCBCEECBTTT-SCCE-ETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGGGEEECSCHHHHHH
T ss_pred CCCeEEecCCc-cCCC-hHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcCCEEEECCHHHHHH
Confidence 34455555432 3433 4668888888887654211 1111 11234566688999999999965 5677778889999
Q ss_pred HHHHhhcCCCC---EEEEeCcccHHHHH----HHHhcCCeE-----EEecCC-----CHHHHHHHHHhhchhcccCCCCc
Q psy15447 155 SAIAAYVKRND---AVFVDENINFAIQT----GLIASRCKV-----QYFKHN-----NMQHLEELLRQQDERDTLNSKVT 217 (457)
Q Consensus 155 ~ai~a~~~~gd---~v~~~~~~h~~~~~----~~~~~g~~~-----~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~ 217 (457)
.++.++.++++ .|+++.+.|.+... .++..|.++ ...+.+ |++++++.++++. ++
T Consensus 143 ~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~--------~~ 214 (465)
T 3e9k_A 143 LLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEG--------DS 214 (465)
T ss_dssp HHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHG--------GG
T ss_pred HHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcC--------CC
Confidence 99999976554 59999999987544 445567653 233322 7999999997643 35
Q ss_pred cEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc--cCcc-
Q psy15447 218 KKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL--GSVG- 294 (457)
Q Consensus 218 ~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l--g~~g- 294 (457)
+++|++++++|++|.+.|+++|.++|++||+++|+|++|+.|.... ++...++|++++|++|++ |+.|
T Consensus 215 ~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~---------~~~~~~~D~~~~s~~K~l~~gp~~~ 285 (465)
T 3e9k_A 215 IAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVEL---------YLHDWGVDFACWCSYKYLNAGAGGI 285 (465)
T ss_dssp EEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCC---------CHHHHTCCEEEECSSSTTCCCTTCC
T ss_pred eEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCC---------chhhcCCCEEEECcccccccCCCce
Confidence 7899999999999999999999999999999999999998765421 111124589999999999 3433
Q ss_pred cEEEecHHHHHHHHhhCCcc---------------ee--------cCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHH
Q psy15447 295 GFCVGSSYIIEHHRLSGSGY---------------CF--------SASLPPFLAVAANKALHLLKAN--PSLLTKLREKC 349 (457)
Q Consensus 295 G~v~~~~~~~~~~~~~~~~~---------------~~--------~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~ 349 (457)
|+++.++++.+.+.....++ .+ .++.++..+++..++++.+.+. ++++++.+++.
T Consensus 286 g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~ 365 (465)
T 3e9k_A 286 AGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLT 365 (465)
T ss_dssp CEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred EEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 78888887765543221111 00 1256778888888888887652 56788899999
Q ss_pred HHHHHHhhcccc-------cCCeEEeccC----CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccC
Q psy15447 350 NTMHSLLSQHKV-------TQRFLVQGHR----DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAK 418 (457)
Q Consensus 350 ~~l~~~L~~~~~-------~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~ 418 (457)
+++.+.|++... .+++++..+. .+.++++.++. ...++.+.|.++||.+...
T Consensus 366 ~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~---------~~~~l~~~L~~~Gi~v~~~-------- 428 (465)
T 3e9k_A 366 GYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSV---------PNKDVFQELEKRGVVCDKR-------- 428 (465)
T ss_dssp HHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECC---------TTCCHHHHHHTTTEECEEE--------
T ss_pred HHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecC---------CHHHHHHHHHHCCEEEecC--------
Confidence 999999987210 0578776543 27788887762 2236889999999988632
Q ss_pred CCCCeEEEEe-cCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 419 KQKPSIRITC-NISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 419 ~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
.++++|+++ +..+|++|+++++++|++++++.
T Consensus 429 -~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~ 461 (465)
T 3e9k_A 429 -NPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSA 461 (465)
T ss_dssp -TTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC-
T ss_pred -CCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhc
Confidence 247999999 89999999999999999988654
No 140
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.96 E-value=3.1e-27 Score=234.07 Aligned_cols=291 Identities=14% Similarity=0.141 Sum_probs=216.2
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~ 198 (457)
..+...++++++++++|.+.+++++||++|+..++.++.++||.|++..+.|.++...+ ...|.++..++..|+++
T Consensus 63 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~ 142 (398)
T 1gc0_A 63 SNPTLNLLEARMASLEGGEAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQA 142 (398)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHH
T ss_pred CChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHH
Confidence 56788999999999999999999999999999999999999999999999998877765 56688999999889999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.+++ ++++|++++++|++|.+.|+++|+++|++||+++|+||+|+.+.++. .. . .+
T Consensus 143 l~~~i~~-----------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~---~~--~-----~~ 201 (398)
T 1gc0_A 143 LEAAMTP-----------ATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQR---PL--E-----LG 201 (398)
T ss_dssp HHHHCCT-----------TEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCC---GG--G-----GT
T ss_pred HHHhcCC-----------CCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCC---ch--h-----hC
Confidence 9888753 56899999999999999999999999999999999999998765532 11 1 23
Q ss_pred ccEEEecCcccccCc----ccEEEecHHHHH-HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGSV----GGFCVGSSYIIE-HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 279 ~Di~~~s~sK~lg~~----gG~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~ 353 (457)
+|+++.|++|++|++ ||+++++++.++ .++..... .++++.+|+.++++.++++.+ +.++++..++.+.+.
T Consensus 202 ~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~ 277 (398)
T 1gc0_A 202 ADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKD-MTGAVLSPHDAALLMRGIKTL---NLRMDRHCANAQVLA 277 (398)
T ss_dssp CSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHH-HTCCCCCHHHHHHHHHHHTTH---HHHHHHHHHHHHHHH
T ss_pred ceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhc-cCCCCCCHHHHHHHHhccchH---HHHHHHHHHHHHHHH
Confidence 589999999999753 689999887665 44322211 144567888888887777644 346677888888888
Q ss_pred HHhhcccc-----------cCCeEEecc---CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccc---c----
Q psy15447 354 SLLSQHKV-----------TQRFLVQGH---RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPS---H---- 412 (457)
Q Consensus 354 ~~L~~~~~-----------~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~---~---- 412 (457)
+.|+++.. .+++.+..+ ..++++.+.+... ...+.+.+.+.|+.+.... .
T Consensus 278 ~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~~~~~~~l~~~~i~~~~~s~G~~~sl~ 348 (398)
T 1gc0_A 278 EFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGG---------IGAGRRFMNALQLFSRAVSLGDAESLA 348 (398)
T ss_dssp HHHHTCTTEEEEEEC----------------CCTTEEEEEETTH---------HHHHHHHHHHCSSSEECSCCSCSSCEE
T ss_pred HHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECCC---------HHHHHHHHHhCCCceeccCCCCcceee
Confidence 88876321 112222211 3477888877542 1235556666787765421 1
Q ss_pred --Ccc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 413 --LDQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 413 --~~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
|.. .....++.+|++++..+++++++.+.++|+++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 349 QHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp ECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred ecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 111 00112579999999999999999999999864
No 141
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.96 E-value=4.5e-28 Score=236.18 Aligned_cols=328 Identities=14% Similarity=0.116 Sum_probs=229.4
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIA 158 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~ 158 (457)
.+++|.+ ++.+ ..+|++.+++.+++..|+.+ .|..+...++++++++++|.+ .++++++|++|+..+++
T Consensus 14 ~~i~l~~-~~~~-~~~~~v~~a~~~~~~~~~~~-------~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~ 84 (359)
T 1svv_A 14 KPYSFVN-DYSV-GMHPKILDLMARDNMTQHAG-------YGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACS 84 (359)
T ss_dssp -CEECSC-SCSS-CCCHHHHHHHHHHTTCCCCS-------TTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHH
T ss_pred eeEEecC-CCcC-CCCHHHHHHHHHHHhhcccc-------ccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHH
Confidence 4788887 4445 45899999999998754322 346788999999999999854 46788899999999999
Q ss_pred hhcCCCCEEEEeCcccHHHHH--HHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCC
Q psy15447 159 AYVKRNDAVFVDENINFAIQT--GLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD 232 (457)
Q Consensus 159 a~~~~gd~v~~~~~~h~~~~~--~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~ 232 (457)
+++++||.|++..+.|.++.. .++..|.++..++.+ |++++++.+++.... . ..++++|+++++ |++|.
T Consensus 85 ~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~---~-~~~~~~v~~~~~-~ptG~ 159 (359)
T 1svv_A 85 LALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCPDGKLRVADIESALHENRSE---H-MVIPKLVYISNT-TEVGT 159 (359)
T ss_dssp HHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCTTSCCCHHHHHHHHHHSCST---T-SCEEEEEEEESS-CTTSC
T ss_pred HHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCCCCeecHHHHHHHHHHHHhc---c-CCCceEEEEEcC-CCCce
Confidence 999999999999999998877 377789899888865 589999998753100 0 124678888888 68999
Q ss_pred CCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHH
Q psy15447 233 ICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHR 308 (457)
Q Consensus 233 i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~ 308 (457)
+.| +++|+++|++||+++|+||+|....+|..+... ...++. ...|+++.|.+|..+..| |+++.++++++.++
T Consensus 160 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~-~~~d~~~~s~~K~g~~~~~g~l~~~~~~~~~~~ 237 (359)
T 1svv_A 160 QYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDL-TLADIA-RLTDMFYIGATKAGGMFGEALIILNDALKPNAR 237 (359)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCC-CHHHHH-HHCSEEEEECTTTTCSSCEEEEECSGGGCTTHH
T ss_pred ecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcch-hhhhhh-hcCCEEEEecccCCCCCceEEEEEcccHHHHHH
Confidence 999 889999999999999999998321122222110 111100 134788889999866555 88888888776665
Q ss_pred hhC--CcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCc
Q psy15447 309 LSG--SGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD 384 (457)
Q Consensus 309 ~~~--~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 384 (457)
... .++.++.+ .+.. ++..+. +++. ++++++++++.+++.+.|+. +++++..+..++++++.+.
T Consensus 238 ~~~~~~~~~~~~~-~~~~-~~~~~~---l~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~--- 305 (359)
T 1svv_A 238 HLIKQRGALMAKG-WLLG-IQFEVL---MKDNLFFELGAHSNKMAAILKAGLEA----CGIRLAWPSASNQLFPILE--- 305 (359)
T ss_dssp HHHHHTTCCCTTT-HHHH-HHHHHH---TSTTHHHHHHHHHHHHHHHHHHHHHH----TTCCBSSCCSSSEECBEEE---
T ss_pred HHHhcCCcccccc-hhhH-HHHHHH---HhhhhHHHHHHHHHHHHHHHHHHhcc----CCeEEccCCccceEEEEcC---
Confidence 321 22222221 2222 222222 3322 35778889999999999943 6777665555666665443
Q ss_pred chHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 385 DEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 385 ~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
.++.+.|.++ ||++.... +...+++|++++..+|++|+++++++|+++++++
T Consensus 306 ---------~~~~~~l~~~~gi~v~~~~------~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 358 (359)
T 1svv_A 306 ---------NTMIAELNNDFDMYTVEPL------KDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST 358 (359)
T ss_dssp ---------HHHHHHHTTTEECEEEEEE------TTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred ---------HHHHHHHHHhcCEEEEecc------cCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence 2588899998 99983211 1234689999999999999999999999887653
No 142
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.96 E-value=1.5e-26 Score=229.42 Aligned_cols=292 Identities=15% Similarity=0.177 Sum_probs=215.9
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHHH
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQHL 199 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~l 199 (457)
.+...++++.+++++|.+.++++++|++|+..++.+++++||.|++..+.|.++.. .++..|.++..++.+|++++
T Consensus 61 ~~~~~~l~~~ia~~~g~~~~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l 140 (404)
T 1e5e_A 61 NPTVSNLEGKIAFLEKTEACVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTAIPGEV 140 (404)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHH
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHH
Confidence 56778999999999999999999999999999999999999999999999998877 67888999999999899999
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHH-cCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSK-YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~-~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
++.+++ ++++|++++++||+|.+.|+++|.++|++ ||+++|+||+|+.+.+.. .+ + + +
T Consensus 141 ~~~i~~-----------~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~---~~-~-~-----~ 199 (404)
T 1e5e_A 141 KKHMKP-----------NTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITN---PV-D-F-----G 199 (404)
T ss_dssp HHHCCT-----------TEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCC---GG-G-G-----T
T ss_pred HHhcCC-----------CCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCC---cc-c-c-----C
Confidence 888742 46899999999999999999999999999 999999999998765421 11 1 2 3
Q ss_pred ccEEEecCcccccCc----ccEEEecHHHHH-HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGSV----GGFCVGSSYIIE-HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 279 ~Di~~~s~sK~lg~~----gG~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~ 353 (457)
.|+++.|+||+++++ ||++++++++++ .++..... .++.+.+++.++++.++++.+ +.+.++..++.+.+.
T Consensus 200 ~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~-~~g~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~ 275 (404)
T 1e5e_A 200 VDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKD-ITGSVISPHDAWLITRGLSTL---NIRMKAESENAMKVA 275 (404)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCC-CCCCCCCHHHHHHHHHHHTTH---HHHHHHHHHHHHHHH
T ss_pred CEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHh-CCCCCCCHHHHHHHHHhHhHH---HHHHHHHHHHHHHHH
Confidence 589999999999754 599999998887 66644322 124457888888888777543 235666777777777
Q ss_pred HHhhcccc-----------cCCeEEec---cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccc--------
Q psy15447 354 SLLSQHKV-----------TQRFLVQG---HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPS-------- 411 (457)
Q Consensus 354 ~~L~~~~~-----------~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-------- 411 (457)
+.|++... .+++.+.. ...+.++.+.+++. ...+.+.+.+.||++....
T Consensus 276 ~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~---------~~~~~~~l~~~~i~~~~~s~G~~~sl~ 346 (404)
T 1e5e_A 276 EYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSG---------FEGAKKLLDNLKLITLAVSLGGCESLI 346 (404)
T ss_dssp HHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETTH---------HHHHHHHHHTCSSSEESSCCCSSSCEE
T ss_pred HHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCCC---------HHHHHHHHHhCCCceeccCCCCcceee
Confidence 77766210 11222111 11367777776532 1234455556788555421
Q ss_pred -cCccc------------cCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 412 -HLDQE------------AKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 412 -~~~~~------------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
+|... ....++.+|++++. ||++++++.|+++++.+..
T Consensus 347 ~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~----e~~~~li~~l~~al~~~~~ 397 (404)
T 1e5e_A 347 QHPASMTHAVVPKEEREAAGITDGMIRLSVGI----EDADELIADFKQGLDALLR 397 (404)
T ss_dssp ECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHHHHHHC
T ss_pred ecccccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHHHHHH
Confidence 11110 01115799999986 8899999999988876644
No 143
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.96 E-value=3.3e-27 Score=232.94 Aligned_cols=315 Identities=12% Similarity=0.114 Sum_probs=230.9
Q ss_pred ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCccc
Q psy15447 96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENIN 174 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h 174 (457)
.|++.+++.+++++... .+...+...++++++++++|.+..++++||++|+..++.++ .++||.|++..+.|
T Consensus 16 ~~~~~~a~~~~l~~~~~-------~~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~al~~~l~~l~~~~gd~Vi~~~~~~ 88 (388)
T 1b9h_A 16 DDAERNGLVRALEQGQW-------WRMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGVGPGTEVIVPAFTF 88 (388)
T ss_dssp CHHHHHHHHHHHHTSCC-------BTTTCSHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSC
T ss_pred CHHHHHHHHHHHHcCCe-------eecCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCcc
Confidence 37899999999876211 12345678899999999999988999999999999999999 89999999999999
Q ss_pred HHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCc
Q psy15447 175 FAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQA 248 (457)
Q Consensus 175 ~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~ 248 (457)
.++...+...|.+++.++.+ |++++++.+++ ++++|+ ++|++|.+.|+++|.++|++||+
T Consensus 89 ~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~-----------~~~~v~---~~n~tG~~~~l~~i~~la~~~~~ 154 (388)
T 1b9h_A 89 ISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTP-----------RTKVIM---PVHMAGLMADMDALAKISADTGV 154 (388)
T ss_dssp THHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-----------TEEEEC---CBCGGGCCCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-----------CceEEE---EeCCccCcCCHHHHHHHHHHcCC
Confidence 99999999999998887642 78888887742 345665 67789999999999999999999
Q ss_pred EEEEEcCcccccccCCCCccccccCCCCCCccEEEecCc--ccc-cCcccEEEecHH-H--HHHHHhhC-Cc-------c
Q psy15447 249 RIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE--HAL-GSVGGFCVGSSY-I--IEHHRLSG-SG-------Y 314 (457)
Q Consensus 249 ~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s--K~l-g~~gG~v~~~~~-~--~~~~~~~~-~~-------~ 314 (457)
++|+||+|+.|... .|..+ ..++ |+.+.||| |++ |+.||+++++++ + ++.++... .+ +
T Consensus 155 ~li~D~a~~~g~~~-~~~~~-~~~~------~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (388)
T 1b9h_A 155 PLLQDAAHAHGARW-QGKRV-GELD------SIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRY 226 (388)
T ss_dssp CBCEECTTCTTCEE-TTEEG-GGSS------SCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSC
T ss_pred EEEEecchhcCCcc-CCeec-cccc------ceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCccCccc
Confidence 99999999876432 12211 1121 56677887 777 456799888875 5 55553221 10 1
Q ss_pred -----eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc------CCCCeEEEEecCC
Q psy15447 315 -----CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH------RDTPLKYLYLQKS 383 (457)
Q Consensus 315 -----~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~------~~~~~~~i~~~~~ 383 (457)
.++..++++.++++.+.++.++ +..++.+++.+++.+.|++ ++++.+..+ ..++++++.++..
T Consensus 227 ~~~~~g~~~~~~~~~~a~~~~~~~~l~---~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (388)
T 1b9h_A 227 FHKIAGSNMRLNEFSASVLRAQLARLD---EQIAVRDERWTLLSRLLGA---IDGVVPQGGDVRADRNSHYMAMFRIPGL 300 (388)
T ss_dssp CCCSCCCBCBCBHHHHHHHHHHHTTHH---HHHHHHHHHHHHHHHHHHT---STTCEECCCCTTCCBCCCSEEEEECTTC
T ss_pred eeecccccCCcCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcc---CCCccccCCCcCCCccceEEEEEEeCCc
Confidence 0111257777776666665543 3677888899999999988 457776542 2357888887643
Q ss_pred cchHHHHHHHHHHHHHHHHcCeeEeccccCccccC--------C----------------CCCeEEEEecCCC-CHHHHH
Q psy15447 384 DDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAK--------K----------------QKPSIRITCNISH-TEQDMN 438 (457)
Q Consensus 384 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~--------~----------------~~~~lRi~~~~~~-t~edi~ 438 (457)
. .....++.+.|.++||.+++...|....+ . ....+||+++..+ |++||+
T Consensus 301 ~-----~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~ 375 (388)
T 1b9h_A 301 T-----EERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELH 375 (388)
T ss_dssp C-----HHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHH
T ss_pred C-----cccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHH
Confidence 1 01356789999999999987544321000 0 0236999999999 999999
Q ss_pred HHHHHHHHHHHH
Q psy15447 439 SLIETLCKSHDI 450 (457)
Q Consensus 439 ~~~~~l~~~~~~ 450 (457)
+++++|+++++.
T Consensus 376 ~~~~~l~~~~~~ 387 (388)
T 1b9h_A 376 ATAEIIADAVAR 387 (388)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 999999998764
No 144
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.96 E-value=9.2e-28 Score=237.95 Aligned_cols=326 Identities=12% Similarity=0.102 Sum_probs=235.8
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHh
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA 159 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a 159 (457)
++|+||.++.+. + .|++.+++.+++.+.. |+..+...++++++++++|.+.++++++|++|+..++.+
T Consensus 30 ~~~id~~~~~~~-~--~~~v~~a~~~~~~~~~---------y~~~~~~~~l~~~la~~~~~~~~v~~~~Gt~a~~~~l~~ 97 (399)
T 2oga_A 30 VPFLDLKAAYEE-L--RAETDAAIARVLDSGR---------YLLGPELEGFEAEFAAYCETDHAVGVNSGMDALQLALRG 97 (399)
T ss_dssp BCSCCHHHHHHH-T--HHHHHHHHHHHHHHTC---------CSSSHHHHHHHHHHHHHTTSSEEEEESCHHHHHHHHHHH
T ss_pred CcccccCcCCCC-C--CHHHHHHHHHHHhcCC---------CCCchhHHHHHHHHHHHHCCCeEEEecCHHHHHHHHHHH
Confidence 578998875431 2 2889999999987621 123466789999999999998899999999999999999
Q ss_pred h-cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCC
Q psy15447 160 Y-VKRNDAVFVDENINFAIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD 232 (457)
Q Consensus 160 ~-~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~ 232 (457)
+ +++||.|++..+.|.++...++..|.++..++. .|++++++.+++ ++++|++ .|++|.
T Consensus 98 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-----------~~~~v~~---~n~tG~ 163 (399)
T 2oga_A 98 LGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAITP-----------RTRALLP---VHLYGH 163 (399)
T ss_dssp TTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCT-----------TEEEECC---BCGGGC
T ss_pred hCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCC-----------CCeEEEE---eCCcCC
Confidence 9 899999999999999999999999998887763 378888887743 3456663 467899
Q ss_pred CCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecC--cccccC--cccEEEec-HHHHHHH
Q psy15447 233 ICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSL--EHALGS--VGGFCVGS-SYIIEHH 307 (457)
Q Consensus 233 i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~--sK~lg~--~gG~v~~~-~~~~~~~ 307 (457)
+.|+++|.++|++||+++|+||+|++|... .+.. ++. -.|+++.|+ +|++|+ .||+++++ +++++.+
T Consensus 164 ~~~l~~i~~l~~~~~~~li~Dea~~~g~~~-~~~~----~~~---~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l 235 (399)
T 2oga_A 164 PADMDALRELADRHGLHIVEDAAQAHGARY-RGRR----IGA---GSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERL 235 (399)
T ss_dssp CCCHHHHHHHHHHHTCEECEECTTCTTCEE-TTEE----TTC---TTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHH
T ss_pred ccCHHHHHHHHHHcCCEEEEECcccccCcc-CCee----ccc---ccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHH
Confidence 999999999999999999999999876432 2221 221 127999999 699976 56888875 7887766
Q ss_pred HhhC-Ccc---------eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-CC-Ce
Q psy15447 308 RLSG-SGY---------CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR-DT-PL 375 (457)
Q Consensus 308 ~~~~-~~~---------~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~-~~-~~ 375 (457)
+... .+. .+...++++.++++.++++.+++ ..++.+++.+++.+.|++ ++++.+...+ .+ ++
T Consensus 236 ~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~l~~~L~~---~~g~~~~~~~~~~~~~ 309 (399)
T 2oga_A 236 RMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHLDS---WNGRRSALAAEYLSGLAG---LPGIGLPVTAPDTDPV 309 (399)
T ss_dssp HHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTHHH---HHHHHHHHHHHHHHHTTT---CTTCBCCCCCTTEECC
T ss_pred HHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhcc---CCCccccCCCCCCcce
Confidence 4321 111 12224688888888888876643 567778889999999987 4566553222 11 11
Q ss_pred -EEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc-Cccc------cCC-----------CCCeEEEEecCCCCHHH
Q psy15447 376 -KYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH-LDQE------AKK-----------QKPSIRITCNISHTEQD 436 (457)
Q Consensus 376 -~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-~~~~------~~~-----------~~~~lRi~~~~~~t~ed 436 (457)
+.+.+... ...++.+.|.++||.+++... +... ... ..+.+||+++..+|++|
T Consensus 310 ~~~~~~~~~--------~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~ed 381 (399)
T 2oga_A 310 WHLFTVRTE--------RRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQ 381 (399)
T ss_dssp CSSEEEECS--------SHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHH
T ss_pred eEEEEEECC--------CHHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHH
Confidence 11222222 235788999999999976321 1000 000 02579999999999999
Q ss_pred HHHHHHHHHHHHHHhcC
Q psy15447 437 MNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 437 i~~~~~~l~~~~~~~~~ 453 (457)
+++++++|+++++++.+
T Consensus 382 i~~~~~~l~~~~~~l~~ 398 (399)
T 2oga_A 382 ALRVIDAVREWAERVDQ 398 (399)
T ss_dssp HHHHHHHHHHHHHSCC-
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999887654
No 145
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.96 E-value=9.6e-27 Score=229.58 Aligned_cols=287 Identities=14% Similarity=0.111 Sum_probs=215.9
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~ 198 (457)
..+...++++++++++|.+..+++++|++|+..+++++.++||.|++..+.|.+....+ ...|.++..++.+|+++
T Consensus 50 ~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~ 129 (386)
T 1cs1_A 50 GNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQA 129 (386)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTCHHH
T ss_pred CCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCCCHHH
Confidence 35677899999999999888899999999999999999999999999999998765543 56688999999999999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.+++ ++++|++++++|++|.+.|+++|+++|++||+++|+||+|+.+.... .. . .+
T Consensus 130 l~~~i~~-----------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~---~~--~-----~~ 188 (386)
T 1cs1_A 130 LRAALAE-----------KPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQN---PL--A-----LG 188 (386)
T ss_dssp HHHHHHT-----------CCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCC---GG--G-----GT
T ss_pred HHHhhcc-----------CCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCC---cc--c-----cC
Confidence 9999863 45788899999999999999999999999999999999998764421 11 1 23
Q ss_pred ccEEEecCcccccCc----ccEEEecH-HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGSV----GGFCVGSS-YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 279 ~Di~~~s~sK~lg~~----gG~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~ 353 (457)
+|+++.|++|++|++ ||++++++ ++++.++..... ++.+.+++.++++.++++.+. +..+++.++.+++.
T Consensus 189 ~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~l~ 263 (386)
T 1cs1_A 189 ADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANN--IGVTGGAFDSYLLLRGLRTLV---PRMELAQRNAQAIV 263 (386)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHH--HTCBCCHHHHHHHHHHHTTHH---HHHHHHHHHHHHHH
T ss_pred ceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHh--cCCCCCHHHHHHHHhcccHHH---HHHHHHHHHHHHHH
Confidence 489999999999743 38888875 788877654322 334468888877777765442 35677888888888
Q ss_pred HHhhcccccCCeEEec-----------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccc-----
Q psy15447 354 SLLSQHKVTQRFLVQG-----------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPS----- 411 (457)
Q Consensus 354 ~~L~~~~~~~~~~~~~-----------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----- 411 (457)
+.|+++ +.+.-.. ...++++.+.+.+. ...+.+.|.++||+++...
T Consensus 264 ~~l~~~---~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~~gi~~~~~~~g~~~ 331 (386)
T 1cs1_A 264 KYLQTQ---PLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD---------EQTLRRFLGGLSLFTLAESLGGVE 331 (386)
T ss_dssp HHHTTC---TTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSC---------HHHHHHHHHTCSSSEEBSCCCSSS
T ss_pred HHHhcC---CCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECCC---------HHHHHHHHHhCCcceEcccCCCcc
Confidence 888773 3322110 12377888877643 2356677778899887421
Q ss_pred ----cCcc----c--------cCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 412 ----HLDQ----E--------AKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 412 ----~~~~----~--------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
+|.. . ....++.+|++++...++++++.+.++|+++
T Consensus 332 sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 332 SLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_dssp CEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred eeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 1110 0 0112579999999988899999988888765
No 146
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.96 E-value=6.3e-27 Score=231.17 Aligned_cols=287 Identities=15% Similarity=0.153 Sum_probs=219.1
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~ 198 (457)
..+...+|++++++++|.+.+++++||++|+..++++++++||.|++..+.|+++...+ ...|.++..++.+|+++
T Consensus 64 ~~~~~~~l~~~la~~~g~~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~ 143 (392)
T 3qhx_A 64 GNPTRTALEAALAAVEDAAFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALADLDA 143 (392)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTTCHHH
T ss_pred CChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCCCHHH
Confidence 46778999999999999999999999999999999999999999999999998877665 56688999999999999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.+++ ++++|++++++|++|.+.|+++|+++|++||+++|+||+|+.+.... ..+ .+
T Consensus 144 l~~~i~~-----------~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~~-------~~~---~~ 202 (392)
T 3qhx_A 144 VRAAIRP-----------TTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQQ-------PLS---LG 202 (392)
T ss_dssp HHHHCCT-----------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCC-------GGG---GT
T ss_pred HHHhhCC-----------CCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccCC-------hHH---hC
Confidence 9988853 56889999999999999999999999999999999999997553321 112 23
Q ss_pred ccEEEecCcccccCc----ccEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGSV----GGFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 279 ~Di~~~s~sK~lg~~----gG~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~ 353 (457)
+|+++.|++|.+|+. +|+++++ +++.+.++.... .++...+|+.++++++.++.+. ..+++..++.+++.
T Consensus 203 ~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~--~~g~~~~~~~~~~~~~~l~~l~---~~~~~~~~~~~~l~ 277 (392)
T 3qhx_A 203 ADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQN--GAGAVPGPFDAYLTMRGLKTLV---LRMQRHSENAAAVA 277 (392)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHH--HHCCCCCHHHHHHHHHHHTTHH---HHHHHHHHHHHHHH
T ss_pred CcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHH--hcCCCCCHHHHHHHHhhhhHHH---HHHHHHHHHHHHHH
Confidence 489999999999753 6888887 577777654332 2344568888888877766543 35678888888999
Q ss_pred HHhhcccccCCeEEecc-----------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc-
Q psy15447 354 SLLSQHKVTQRFLVQGH-----------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ- 415 (457)
Q Consensus 354 ~~L~~~~~~~~~~~~~~-----------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~- 415 (457)
+.|++ .+.+..+.. ..+.++++.++.+. ....++.+.|...|+.+..+.....
T Consensus 278 ~~L~~---~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~------~~~~~~~~~l~~~~~~~s~G~~~sl~ 348 (392)
T 3qhx_A 278 EFLAE---HPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGR------TAAEQLCAKTNIFILAESLGSVESLI 348 (392)
T ss_dssp HHHHT---CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCH------HHHHHHHHHCSSSEECSCCCCSSCEE
T ss_pred HHHhc---CCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcH------HHHHHHHHhCCCceECCCCCCCCcee
Confidence 99887 344432211 12668889887642 1556777777777777665443211
Q ss_pred ---------c-----cCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447 416 ---------E-----AKKQKPSIRITCNISHTEQDMNSLIETL 444 (457)
Q Consensus 416 ---------~-----~~~~~~~lRi~~~~~~t~edi~~~~~~l 444 (457)
. ....++.+||+++...++++++.+.++|
T Consensus 349 ~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~al 391 (392)
T 3qhx_A 349 EHPSAMTHASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQAL 391 (392)
T ss_dssp ECGGGTSCGGGBTTBCCCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred eCcccccccccCHHHcCCCCCeEEEEeccCCHHHHHHHHHHHh
Confidence 0 0123678999999888888888777765
No 147
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.96 E-value=1.1e-26 Score=231.96 Aligned_cols=290 Identities=14% Similarity=0.088 Sum_probs=220.1
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~ 198 (457)
..+...++++++++++|.+..++++||++|+..++.+++++||.|++..+.|+++... +...|.++..++.+|+++
T Consensus 112 ~~~~~~~l~~~lA~l~g~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~ 191 (445)
T 1qgn_A 112 GNPTTVVLEEKISALEGAESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGA 191 (445)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSCHHH
T ss_pred CChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHH
Confidence 4678899999999999998899999999999999999999999999999999887764 455689999999999999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.+++ .++++|++|+++|++|.+.|+++|.++|++||+++|+||+|+.+.... ... .+
T Consensus 192 l~~ai~~----------~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~-------~~~---~g 251 (445)
T 1qgn_A 192 LELALNQ----------KKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQK-------ALA---LG 251 (445)
T ss_dssp HHHHHHH----------SCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCC-------TTT---TT
T ss_pred HHHHhcc----------CCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCC-------ccc---cC
Confidence 9999874 223799999999999999999999999999999999999997654321 111 24
Q ss_pred ccEEEecCcccccCc----ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGSV----GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS 354 (457)
Q Consensus 279 ~Di~~~s~sK~lg~~----gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~ 354 (457)
+|+++.|++|.+|+. +|++++++++++.+.... ..+++..+|+.++.+++.++.+. .++++..++.+++.+
T Consensus 252 ~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~--~~~g~~~~~~~a~~~~~~l~~l~---~r~~~~~~~a~~l~~ 326 (445)
T 1qgn_A 252 ADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLH--HILGGALNPNAAYLIIRGMKTLH---LRVQQQNSTALRMAE 326 (445)
T ss_dssp CSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHH--HHHCCCCCHHHHHHHHHHGGGHH---HHHHHHHHHHHHHHH
T ss_pred CEEEEECCcccccccccceEEEEEECHHHHHHHHHHH--HHhCCCCCHHHHHHHHHhHHHHH---HHHHHHHHHHHHHHH
Confidence 589999999999753 799999998888775432 23455568887777766665443 356777788889999
Q ss_pred HhhcccccCCe-EEecc----------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc--
Q psy15447 355 LLSQHKVTQRF-LVQGH----------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-- 415 (457)
Q Consensus 355 ~L~~~~~~~~~-~~~~~----------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-- 415 (457)
.|++ .+++ .+..+ ..+.++.+.++... ....++.+.|...++.++.+..++.
T Consensus 327 ~L~~---~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~------~~~~~~l~~l~~~~i~~s~G~~~sl~~ 397 (445)
T 1qgn_A 327 ILEA---HPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDL------LTTAKFVDALKIPYIAPSFGGCESIVD 397 (445)
T ss_dssp HHHT---CTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCH------HHHHHHHHHCSSSEECSCCCSSSCEEE
T ss_pred HHhc---CCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCH------HHHHHHHHhCCCceEeccCCCCceeee
Confidence 9988 4555 33222 24778899887642 1355666666544666555443321
Q ss_pred ----------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 416 ----------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 416 ----------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
.....++.+|+++. .||++++++.|+++++.
T Consensus 398 ~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG----~Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 398 QPAIMSYWDLSQSDRAKYGIMDNLVRFSFG----VEDFDDLKADILQALDS 444 (445)
T ss_dssp CHHHHHSTTSCHHHHHTTTCCSSEEEEECC----SSCHHHHHHHHHHHHHH
T ss_pred cccccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHhh
Confidence 01122479999997 46899999999988764
No 148
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.96 E-value=1.3e-27 Score=244.61 Aligned_cols=338 Identities=11% Similarity=0.055 Sum_probs=237.7
Q ss_pred EEeecCCccCCC--CChhhHHHHHHHHHhcCC-CCCCCCCcccChHHHHHHHHHHHhhcCCC----cE--EEecccHHHH
Q psy15447 83 INFATHNYLSFV--ENPDIEKCAIDCIDKNGV-GSCGPRGFYGTNVVHLDLENDIASFMGLE----ET--ALYSFGFSTS 153 (457)
Q Consensus 83 id~~s~~~l~~~--~~p~i~~a~~~~l~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~g~~----~~--i~~~sG~~a~ 153 (457)
+++.++.++|.. .++.+.+++.+++..+.. ....+....+......++++++++++|.+ .+ +++++|++|+
T Consensus 94 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~ 173 (514)
T 3mad_A 94 PAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESL 173 (514)
T ss_dssp HHHHTTCBSSSCSCCCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHH
T ss_pred CCCCCCceEEEecCCCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHH
Confidence 445556666643 457788888777765432 11122223344566677888889999966 55 8889999999
Q ss_pred HHHHHhhcCCC--------CEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEE
Q psy15447 154 ASAIAAYVKRN--------DAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKF 220 (457)
Q Consensus 154 ~~ai~a~~~~g--------d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~ 220 (457)
..+++++++++ |.|+++.+.|.++..+++..|.+++.++.+ |+++|++.+++ ++++
T Consensus 174 ~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~-----------~~~~ 242 (514)
T 3mad_A 174 LLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLDADYRADVAAMREAITP-----------NTVV 242 (514)
T ss_dssp HHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHHHHHTCEEEEECBCTTSCBCHHHHHHHCCT-----------TEEE
T ss_pred HHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHHHHcCCeeEEeeeCCCCCCCHHHHHHHhcc-----------CCEE
Confidence 99999987766 899999999999999999999999988866 89999988853 4678
Q ss_pred EEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccc---cCCCCccccccCCCCCCccEEEecCcccc-cC-ccc
Q psy15447 221 IIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTL---GSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GS-VGG 295 (457)
Q Consensus 221 vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~---g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~-~gG 295 (457)
|++++++|++|.+.|+++|+++|++||++||+||+|+.+.+ +..|.... .+.....++|+++.|++|++ ++ ..|
T Consensus 243 v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~-~~~~~~~g~d~~~~s~~K~l~~~~~~g 321 (514)
T 3mad_A 243 VAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVP-PFDFRLEGVTSVSADTHKYGYGAKGTS 321 (514)
T ss_dssp EEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCC-CCSTTSTTCCEEEECTTTTTCCCSSCE
T ss_pred EEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCC-cccccCCCCcEEEECchhccCCCCCeE
Confidence 99999999999999999999999999999999999986544 22222111 12222346789999999996 33 347
Q ss_pred EEEecHHHHHHHHhh-CC--------cceecCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcccccCC
Q psy15447 296 FCVGSSYIIEHHRLS-GS--------GYCFSASLPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQR 364 (457)
Q Consensus 296 ~v~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~ 364 (457)
+++.+++........ .. ...+.++.+....++..++++.+.. .+++.++++++++++.+.|++ +++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~---~~g 398 (514)
T 3mad_A 322 VILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRA---IPS 398 (514)
T ss_dssp EEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---STT
T ss_pred EEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhh---CCC
Confidence 776666544332110 00 0111223333333344444544433 245788899999999999998 568
Q ss_pred eEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEec-CCCCHHHHHHHHHH
Q psy15447 365 FLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCN-ISHTEQDMNSLIET 443 (457)
Q Consensus 365 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~-~~~t~edi~~~~~~ 443 (457)
+++..++ ..++++..... ...++.+.|.++||.+....+ ++.+|++++ ...+++++++++++
T Consensus 399 ~~~~~~~-~~~~~~~~~~~--------~~~~l~~~L~~~Gi~v~g~~~--------~~~~Ri~~~~~~~~~e~i~~~l~~ 461 (514)
T 3mad_A 399 LKILGDP-LWVIAVASDEL--------NIYQVMEEMAGRGWRLNGLHR--------PPAFHVALTLRHTEPGVVDRFLAD 461 (514)
T ss_dssp CEESSCC-SSEEEEECSSS--------CHHHHHHHHHTTTCBCEEETT--------TTEEEEECCGGGGSTTHHHHHHHH
T ss_pred eEEeCCC-eEEEEEeCCCC--------CHHHHHHHHHhcCCEeccCCC--------CCeEEEEEecCCCCHHHHHHHHHH
Confidence 8876444 45666655332 345799999999998843322 468999997 44567999999999
Q ss_pred HHHHHHHhc
Q psy15447 444 LCKSHDIAV 452 (457)
Q Consensus 444 l~~~~~~~~ 452 (457)
|+++++++.
T Consensus 462 L~~~l~~~~ 470 (514)
T 3mad_A 462 LQDAVAQVR 470 (514)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998775
No 149
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.96 E-value=5.1e-27 Score=233.74 Aligned_cols=338 Identities=11% Similarity=0.106 Sum_probs=224.0
Q ss_pred eeEEeecC-CccCCCCChhhHHHHHHHH-HhcCCCCCCCCCcccChHHHHHH----HHHHHhhcCCCcE-EEecccHHHH
Q psy15447 81 PCINFATH-NYLSFVENPDIEKCAIDCI-DKNGVGSCGPRGFYGTNVVHLDL----ENDIASFMGLEET-ALYSFGFSTS 153 (457)
Q Consensus 81 ~~id~~s~-~~l~~~~~p~i~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l----~~~la~~~g~~~~-i~~~sG~~a~ 153 (457)
+.+++.++ +++ +|++.+++.+++ ..++.++.+++. ++......++ ++.+++++|.+.. +++++|++|+
T Consensus 26 ~~i~l~~~~~~~----~~~v~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~~sGt~a~ 100 (417)
T 3n0l_A 26 EGLEMIASENFT----LPEVMEVMGSILTNKYAEGYPGKRY-YGGCEFVDEIETLAIERCKKLFNCKFANVQPNSGSQAN 100 (417)
T ss_dssp HSEECCTTCCCC----CHHHHHHHTBGGGGCCCCEETTEES-SSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHH
T ss_pred cCeeeecccCCC----CHHHHHHHhhhhhccccccCCCccc-cccchHHHHHHHHHHHHHHHHhCCCCcceEeccHHHHH
Confidence 35665443 442 799999999988 444433333332 2233444444 4488999998866 8889999999
Q ss_pred HHHHHhhcCCCCEEEEeCcccHHHHH---HHHhcC--CeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447 154 ASAIAAYVKRNDAVFVDENINFAIQT---GLIASR--CKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIV 223 (457)
Q Consensus 154 ~~ai~a~~~~gd~v~~~~~~h~~~~~---~~~~~g--~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~ 223 (457)
..++++++++||.|++..+.|.+... .....| ..+..++. .|++++++.+++. ++++|++
T Consensus 101 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~----------~~~~v~~ 170 (417)
T 3n0l_A 101 QGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKE----------KPKLIVC 170 (417)
T ss_dssp HHHHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHH----------CCSEEEE
T ss_pred HHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhc----------CCeEEEE
Confidence 99999999999999999998876543 223333 33444443 4899999998742 2356666
Q ss_pred ecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-CcccEEEec-H
Q psy15447 224 EGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVGS-S 301 (457)
Q Consensus 224 e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~-~ 301 (457)
.+++ .|.+.|+++|+++|++||++||+||+|+.|.... +. .... ....|+++.|+||+++ ..||+++++ +
T Consensus 171 ~~~~--~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~-~~----~~~~-~~~~di~~~s~sK~l~g~~~G~~~~~~~ 242 (417)
T 3n0l_A 171 GASA--YARVIDFAKFREIADEIGAYLFADIAHIAGLVVA-GE----HPSP-FPYAHVVSSTTHKTLRGPRGGIIMTNDE 242 (417)
T ss_dssp CCSS--CCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHT-TS----SCCC-TTTCSEEEEESSTTTCSCSCEEEEESCH
T ss_pred CCcc--cCccCCHHHHHHHHHHcCCEEEEECccchhhhhc-cc----CCCc-cccceEEEeeCccccCCCCeeEEEECCH
Confidence 5544 3889999999999999999999999987665422 11 1111 1245899999999994 558999998 7
Q ss_pred HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh--hCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-CCCCeEEE
Q psy15447 302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK--ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-RDTPLKYL 378 (457)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~--~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~i 378 (457)
++++.++....... +++.++..+++..+++.... ..++++++++++.+++.+.|++ .|+.+... ..++++++
T Consensus 243 ~~~~~~~~~~~~~~-~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~ 317 (417)
T 3n0l_A 243 ELAKKINSAIFPGI-QGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD----RKFKLVSDGTDNHLVLM 317 (417)
T ss_dssp HHHHHHHHHHTTTT-CSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH----TTCEEGGGSCSSSEEEE
T ss_pred HHHHHHhhhhCCcc-cCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh----CCceeccCCCCceEEEE
Confidence 88887765432222 22345555555555655432 2246778888999999999988 67776532 34667777
Q ss_pred EecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc-ccCCCCCeEEEEecC----CCCHHHHHHHHHHHHHHHHHhc
Q psy15447 379 YLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCNI----SHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-~~~~~~~~lRi~~~~----~~t~edi~~~~~~l~~~~~~~~ 452 (457)
.+..... ....+.+.|.++||.+.+...|.. ..+...+.+|++++. .++++|+++++++|+++++...
T Consensus 318 ~~~~~~~------~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~ 390 (417)
T 3n0l_A 318 SFLDREF------SGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDVN 390 (417)
T ss_dssp ECTTSSS------CHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTTT
T ss_pred EcccCCC------CHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhccc
Confidence 7653210 245677888889999987654422 112234679998763 3679999999999999987653
No 150
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.96 E-value=2e-27 Score=238.92 Aligned_cols=343 Identities=13% Similarity=0.123 Sum_probs=226.1
Q ss_pred eeEEeecC-CccCCCCChhhHHHHHHHHH-hcCCCCCCCCCcccChHHH--HHHH-HHHHhhcCCCcEEE-ecccHHHHH
Q psy15447 81 PCINFATH-NYLSFVENPDIEKCAIDCID-KNGVGSCGPRGFYGTNVVH--LDLE-NDIASFMGLEETAL-YSFGFSTSA 154 (457)
Q Consensus 81 ~~id~~s~-~~l~~~~~p~i~~a~~~~l~-~~~~~~~~~~~~~g~~~~~--~~l~-~~la~~~g~~~~i~-~~sG~~a~~ 154 (457)
..|++.++ ++ . +|++.+|+.+++. .|+.++.+++...|..... ++++ +++++++|.+.+.+ ++||++|+.
T Consensus 46 ~~i~l~~~~~~---~-~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~~~~v~~~sGs~a~~ 121 (447)
T 3h7f_A 46 DTLEMIASENF---V-PRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAEFANVQPHSGAQANA 121 (447)
T ss_dssp HSEECCTTCCC---C-CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHH
T ss_pred CceeEecCCCC---C-CHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCCceEEEeCCHHHHHH
Confidence 45666543 33 2 7999999999885 5655544444444443333 5566 99999999988776 899999999
Q ss_pred HHHHhhcCCCCEEEEeCcccHH-HHHHH--Hh--cCCeEEEec------CCCHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447 155 SAIAAYVKRNDAVFVDENINFA-IQTGL--IA--SRCKVQYFK------HNNMQHLEELLRQQDERDTLNSKVTKKFIIV 223 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~-~~~~~--~~--~g~~~~~~~------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~ 223 (457)
.++++++++||.|++..+.|.+ ...+. .. .+..+..++ ..|++++++.+++. ++++|++
T Consensus 122 ~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~----------~~~~i~~ 191 (447)
T 3h7f_A 122 AVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEF----------RPKVIIA 191 (447)
T ss_dssp HHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHH----------CCSEEEE
T ss_pred HHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHhc----------CCeEEEE
Confidence 9999999999999999988765 21111 11 123444444 35899999998652 2346667
Q ss_pred ecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-CcccEEEecHH
Q psy15447 224 EGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVGSSY 302 (457)
Q Consensus 224 e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~~~ 302 (457)
+.+.++++. ++++|+++|++||++||+||+|..|... .|. +.+.. ..+|+++.|+||+++ ..||+++++++
T Consensus 192 ~~~~~~~~~--~l~~i~~l~~~~g~lli~Dea~~~g~~~-~g~----~~~~~-~~~di~~~s~sK~l~G~~gG~i~~~~~ 263 (447)
T 3h7f_A 192 GWSAYPRVL--DFAAFRSIADEVGAKLLVDMAHFAGLVA-AGL----HPSPV-PHADVVSTTVHKTLGGGRSGLIVGKQQ 263 (447)
T ss_dssp ECSSCCSCC--CHHHHHHHHHHHTCEEEEECTTTHHHHH-TTS----SCCST-TTCSEEEEESSGGGCCCSCEEEEECGG
T ss_pred cCCCCCCcc--CHHHHHHHHHHcCCEEEEECCchhhhhc-CCC----CCCCC-CCCcEEEecCCcCCCCCCeEEEEECHH
Confidence 555555544 9999999999999999999998766432 111 11111 245899999999996 67899999998
Q ss_pred HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcc-cccCCeEEecc-CCCCeEEE
Q psy15447 303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQH-KVTQRFLVQGH-RDTPLKYL 378 (457)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~-~~~~~~~i 378 (457)
+++.+.....++.+++..++ .++++.+++....+ .+++.+++.++++++.+.|++. ...+|+++... ..++++++
T Consensus 264 ~~~~l~~~~~~~~~~~~~~~-~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~ 342 (447)
T 3h7f_A 264 YAKAINSAVFPGQQGGPLMH-VIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLV 342 (447)
T ss_dssp GHHHHHHHHTTTTCSSCCHH-HHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEE
T ss_pred HHHHHhhhcCCcccCCccHH-HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEE
Confidence 88887665444444443333 33444444443322 2457788999999999999881 00027777532 45677777
Q ss_pred EecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc-ccCCCCCeEEEEecCC----CCHHHHHHHHHHHHHHHHHhc
Q psy15447 379 YLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCNIS----HTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-~~~~~~~~lRi~~~~~----~t~edi~~~~~~l~~~~~~~~ 452 (457)
.+..... ....+.+.|.++||++.....|.. ..+..++.+|++++.. +|++|+++++++|+++++...
T Consensus 343 ~~~~~~~------~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~~~ 415 (447)
T 3h7f_A 343 DLRDSPL------DGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALATGS 415 (447)
T ss_dssp ECTTSSC------CHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHSGG
T ss_pred EcCCCCC------CHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhccC
Confidence 7653210 233455666677999883211110 0023357899998654 689999999999999987653
No 151
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.96 E-value=1.5e-26 Score=235.26 Aligned_cols=341 Identities=12% Similarity=0.086 Sum_probs=231.2
Q ss_pred hhhHHHHHHHHHhcCC-CCCCCCCcccChHHHHHHHHHHHhhcC-----CCcEEEecccHHHHHHHHHhhcCCCC----E
Q psy15447 97 PDIEKCAIDCIDKNGV-GSCGPRGFYGTNVVHLDLENDIASFMG-----LEETALYSFGFSTSASAIAAYVKRND----A 166 (457)
Q Consensus 97 p~i~~a~~~~l~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~g-----~~~~i~~~sG~~a~~~ai~a~~~~gd----~ 166 (457)
.++.+++.+.+++.+. ....+....|..+++.++++.+.+..| .+.+++++++++++..++.+++++|| .
T Consensus 104 ~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~ 183 (498)
T 3ihj_A 104 EDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTG 183 (498)
T ss_dssp HHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEE
T ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCE
Confidence 3455777888887542 223344445667777777777777664 34677778888999999999998875 9
Q ss_pred EEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---h
Q psy15447 167 VFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---L 236 (457)
Q Consensus 167 v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l 236 (457)
|+++.+.|..+...++..|.+++.++.+ |+++|++.+++... ..++++|++.+++||+|.+.+ +
T Consensus 184 Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~------~~~~k~i~l~np~NPTG~v~s~~~l 257 (498)
T 3ihj_A 184 VMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKD------HCDPKVLCIINPGNPTGQVQSRKCI 257 (498)
T ss_dssp EEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTT------TSEEEEEEEESSCTTTCCCCCHHHH
T ss_pred EEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhc------cCCCeEEEEECCCCCCCCcCCHHHH
Confidence 9999999999999999999999888765 89999999976421 014577777799999999988 6
Q ss_pred HHHHHHHHHcCcEEEEEcCcccccccCC--CCcccccc-CCCC---CC-ccEEEecCcccc-c---CcccEEE---ecHH
Q psy15447 237 KDILSLRSKYQARIFVDESVSFGTLGST--GHGVTEYF-GVST---EE-VDMIIGSLEHAL-G---SVGGFCV---GSSY 302 (457)
Q Consensus 237 ~~i~~l~~~~g~~li~DEa~~~g~~g~~--g~~~~~~~-~~~~---~~-~Di~~~s~sK~l-g---~~gG~v~---~~~~ 302 (457)
++|+++|++||+++|+||+|+.+.++.. ...+.... +..+ ++ ..|+++|+||++ | ..+||++ ++++
T Consensus 258 ~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~ 337 (498)
T 3ihj_A 258 EDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPE 337 (498)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHH
T ss_pred HHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHH
Confidence 7899999999999999999988777532 11111110 0000 11 137889999999 4 3459987 6888
Q ss_pred HHHHHHhhCCcceecCCCcHHHHHHHHHHHH-----------HHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC
Q psy15447 303 IIEHHRLSGSGYCFSASLPPFLAVAANKALH-----------LLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR 371 (457)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~-----------~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~ 371 (457)
+++.+..... .+. ..+.+..+++.++++ .+++.++++++++++++++.+.|++ ++|+.+..+.
T Consensus 338 l~~~l~~~~~--~~~-~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~---~~g~~~~~p~ 411 (498)
T 3ihj_A 338 IKGQLVKLLS--VRL-CPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQ---VPGIHCNPLQ 411 (498)
T ss_dssp HHHHHHHHHH--HSC-CCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHT---STTEECCCCC
T ss_pred HHHHHHHHHh--ccC-CCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCcEecCCC
Confidence 8888765432 111 234444444444432 2333345678899999999999988 5688887555
Q ss_pred CCCeEEEEecCCcch-HHH---HHHHHH--HHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447 372 DTPLKYLYLQKSDDE-VAS---KKLLQT--ICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLC 445 (457)
Q Consensus 372 ~~~~~~i~~~~~~~~-~~~---~~~~~~--~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 445 (457)
.+.+.++.+..+... ... ...... +.+.|.++||++.++..+.. ..+.+++|+++. ++++++++++++|+
T Consensus 412 gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~--~~~~~~~Ris~~--~~~e~l~~~i~~L~ 487 (498)
T 3ihj_A 412 GAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQ--REGTYHFRMTIL--PPVEKLKTVLQKVK 487 (498)
T ss_dssp BSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCC--CTTCCBEEEECC--SCHHHHHHHHHHHH
T ss_pred eEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCC--CCCCCEEEEEeC--CCHHHHHHHHHHHH
Confidence 555666555433210 000 001122 24445567999998776532 234579999994 79999999999999
Q ss_pred HHHHHhcC
Q psy15447 446 KSHDIAVQ 453 (457)
Q Consensus 446 ~~~~~~~~ 453 (457)
+++++..+
T Consensus 488 ~~~~~~~~ 495 (498)
T 3ihj_A 488 DFHINFLE 495 (498)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99887654
No 152
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.96 E-value=1e-27 Score=240.94 Aligned_cols=347 Identities=10% Similarity=0.062 Sum_probs=226.4
Q ss_pred eeeE-EeecCCccCCCCChhhHHHHHHHHHhcCCC-------CC--CCCCcccChHHHHHHHHHHHhhc--------CCC
Q psy15447 80 IPCI-NFATHNYLSFVENPDIEKCAIDCIDKNGVG-------SC--GPRGFYGTNVVHLDLENDIASFM--------GLE 141 (457)
Q Consensus 80 ~~~i-d~~s~~~l~~~~~p~i~~a~~~~l~~~~~~-------~~--~~~~~~g~~~~~~~l~~~la~~~--------g~~ 141 (457)
..+| ||+.+++.. .|.+.+++.+++.+.... +. .....|+......++++.+|+++ ..+
T Consensus 31 ~~~i~~l~~g~p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~ 107 (444)
T 3if2_A 31 DQPVNMLGGGNPAK---IDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSE 107 (444)
T ss_dssp SSCCEECSCCCCCC---CHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGG
T ss_pred chhhhccCCCCCCc---ccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHH
Confidence 3577 887765422 366666666666553221 10 00112222333456666666665 345
Q ss_pred cEEEecccHHHHHHHHHhhcCCCC--------------EEEEe-CcccHHHHHH------HHhcCCeEEEec--------
Q psy15447 142 ETALYSFGFSTSASAIAAYVKRND--------------AVFVD-ENINFAIQTG------LIASRCKVQYFK-------- 192 (457)
Q Consensus 142 ~~i~~~sG~~a~~~ai~a~~~~gd--------------~v~~~-~~~h~~~~~~------~~~~g~~~~~~~-------- 192 (457)
+++++++|++|+..++++++++|| .|++. .+.|..+... +...+..+..++
T Consensus 108 ~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 187 (444)
T 3if2_A 108 NIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFF 187 (444)
T ss_dssp GEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEE
T ss_pred HEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEecccccccCcc
Confidence 788888999999999999998887 66653 6666655432 223455555554
Q ss_pred --CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCc
Q psy15447 193 --HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHG 267 (457)
Q Consensus 193 --~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~ 267 (457)
..|+++|++.+++.. +++++|++++++||+|.+.| +++|+++|++||+++|+||+|+.+..+....+
T Consensus 188 ~~~~d~~~l~~~l~~~~--------~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~ 259 (444)
T 3if2_A 188 KYRVDFEALENLPALKE--------GRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSD 259 (444)
T ss_dssp EEECCHHHHHTCHHHHT--------TCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSC
T ss_pred ccCCCHHHHHHHHHhcC--------CCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCccccccccc
Confidence 248999998865432 35678888888999999999 88999999999999999999975322211111
Q ss_pred cccccCCCCCCccEEEecCcccccCc---ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh---hCc-H
Q psy15447 268 VTEYFGVSTEEVDMIIGSLEHALGSV---GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK---ANP-S 340 (457)
Q Consensus 268 ~~~~~~~~~~~~Di~~~s~sK~lg~~---gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~---~~~-~ 340 (457)
.. ....+.+++++|+||. +++ .||+++++++++.+......+.++ .+++.++++.+.++... ... .
T Consensus 260 ~~----~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~ 332 (444)
T 3if2_A 260 AH----LNWDNNTILCFSLSKI-GLPGMRTGIIVADAKVIEAVSAMNAVVNLA--PTRFGAAIATPLVANDRIKQLSDNE 332 (444)
T ss_dssp CC----CCCCTTEEEEEESTTT-TCGGGCCEEEECCHHHHHHHHHHHHHHHSS--CCCHHHHHHHHHHHTSHHHHHHHHT
T ss_pred cc----ccCCCCEEEEechhhc-cCCCCceEEEEECHHHHHHHHHHHHhccCC--CChHHHHHHHHHHHcCchhHHHHHH
Confidence 10 0113457999999997 443 499999999998886544333333 35555555555544211 111 1
Q ss_pred HHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecC-CcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc--
Q psy15447 341 LLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQK-SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA-- 417 (457)
Q Consensus 341 ~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~-- 417 (457)
+++.++++.+.+.+.|.+.....++.+..+..+.++++.++. .. ...++++.|.++||.+.++..+....
T Consensus 333 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~-------~~~~l~~~l~~~gi~v~~g~~~~~~~~~ 405 (444)
T 3if2_A 333 IKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLPI-------STLDLYERLKAKGTLIVPSEYFFPGVDV 405 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCSS-------CHHHHHHHHHHTTEECEEGGGSCTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCCCC-------CHHHHHHHHHHCCeEEecchhhcCCCCC
Confidence 455667777777777755210125666655668888888875 33 34578889999999999876543210
Q ss_pred ---CCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 418 ---KKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 418 ---~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
....+++||+++. |+++|++++++|+++++++.+
T Consensus 406 ~~~~~~~~~iRis~~~--~~e~i~~~l~~l~~~~~~~~~ 442 (444)
T 3if2_A 406 SDYQHAHECIRMSIAA--DEQTLIDGIKVIGEVVRELYD 442 (444)
T ss_dssp TTCSGGGSEEEEESSS--CHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccCCCeEEEEEeC--CHHHHHHHHHHHHHHHHHHHc
Confidence 0123689999986 999999999999999987764
No 153
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.96 E-value=1e-26 Score=229.98 Aligned_cols=294 Identities=11% Similarity=0.079 Sum_probs=219.9
Q ss_pred HHHHHHHHHHHhhcCCC---cEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHH--HHHHhcCCeEEEecC-----C
Q psy15447 125 VVHLDLENDIASFMGLE---ETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQ--TGLIASRCKVQYFKH-----N 194 (457)
Q Consensus 125 ~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~--~~~~~~g~~~~~~~~-----~ 194 (457)
+...++++.+++++|.+ .++++++|++|+..++.++.++||.|++..+.|.++. ..++..|.+++.++. .
T Consensus 51 ~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 130 (396)
T 2ch1_A 51 RTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPPDRPF 130 (396)
T ss_dssp HHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTSCC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEEcCCcccHHHHHHHHHcCCceEEecCCCCCCC
Confidence 45789999999999965 3566778889999999999999999999999888864 366778888887773 5
Q ss_pred CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCC
Q psy15447 195 NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGV 274 (457)
Q Consensus 195 d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~ 274 (457)
|++++++.+++. ++++|++++++|++|.+.|+++|.++|++||+++|+||+|++|... .++
T Consensus 131 d~~~l~~~l~~~----------~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~---------~~~ 191 (396)
T 2ch1_A 131 SLETLARAIELH----------QPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVP---------FYM 191 (396)
T ss_dssp CHHHHHHHHHHH----------CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBC---------CCT
T ss_pred CHHHHHHHHHhC----------CCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCc---------cch
Confidence 899999988641 3468888999999999999999999999999999999999865321 112
Q ss_pred CCCCccEEEecCcccccC-cc-cEEEecHHHHHHHHhhC---Cc------------------ceecCCCcHHHHHHHHHH
Q psy15447 275 STEEVDMIIGSLEHALGS-VG-GFCVGSSYIIEHHRLSG---SG------------------YCFSASLPPFLAVAANKA 331 (457)
Q Consensus 275 ~~~~~Di~~~s~sK~lg~-~g-G~v~~~~~~~~~~~~~~---~~------------------~~~~~~~~~~~~aaa~a~ 331 (457)
...++|+++.|++|++++ .| |+++.++++++.+.... .. ....++.+...++++.++
T Consensus 192 ~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a 271 (396)
T 2ch1_A 192 DKWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREA 271 (396)
T ss_dssp TTTTCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHH
T ss_pred hhcCcCEEEEcCCccccCCCCeEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHH
Confidence 223458989999998853 33 78889988888765321 00 011223566677777778
Q ss_pred HHHHhh--CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC----CCeEEEEecCCcchHHHHHHHHHHHHHHHHc-C
Q psy15447 332 LHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD----TPLKYLYLQKSDDEVASKKLLQTICDMCIQA-G 404 (457)
Q Consensus 332 l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-G 404 (457)
++.+.+ .++.+++++++++++.+.|++ .|+.+..+.. +.++++.++... ...++.+.|.++ |
T Consensus 272 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~L~~~~g 340 (396)
T 2ch1_A 272 LAQIAEEGLENQIKRRIECAQILYEGLGK----MGLDIFVKDPRHRLPTVTGIMIPKGV-------DWWKVSQYAMNNFS 340 (396)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHH----HTCCBSSCSGGGBCTTEEEEECCTTC-------CHHHHHHHHHHHHC
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHH----CCCeeccCCccccCCceEEEEcCCCC-------CHHHHHHHHHHhCC
Confidence 876532 245778899999999999988 3666543322 236777775332 345788999876 9
Q ss_pred eeEeccccCccccCCCCCeEEEEe-cCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 405 FAITCPSHLDQEAKKQKPSIRITC-NISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 405 i~v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
|.++++..+ ...+++|+++ +..+|++|+++++++|+++++++..
T Consensus 341 i~v~~g~~~-----~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~~ 385 (396)
T 2ch1_A 341 LEVQGGLGP-----TFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHP 385 (396)
T ss_dssp BCCBCCCGG-----GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCT
T ss_pred EEEecCccc-----cCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhCc
Confidence 999875431 2357899999 6677999999999999999987753
No 154
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.96 E-value=8.7e-27 Score=229.37 Aligned_cols=288 Identities=16% Similarity=0.130 Sum_probs=211.3
Q ss_pred HHHHHHHHHHhhcCC------CcEEEecccHHHHHHHHHhhc---CCCCEEEEe-CcccHHH-HHHHHhcCCeEEEecC-
Q psy15447 126 VHLDLENDIASFMGL------EETALYSFGFSTSASAIAAYV---KRNDAVFVD-ENINFAI-QTGLIASRCKVQYFKH- 193 (457)
Q Consensus 126 ~~~~l~~~la~~~g~------~~~i~~~sG~~a~~~ai~a~~---~~gd~v~~~-~~~h~~~-~~~~~~~g~~~~~~~~- 193 (457)
...+++++++++++. +.++++++|++|+..++.++. ++||.|++. .+++... ...++..|.+++.++.
T Consensus 39 ~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~ 118 (385)
T 2bkw_A 39 IFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL 118 (385)
T ss_dssp HHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS
T ss_pred HHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecC
Confidence 456788888888775 356777889999999999987 899987665 4444433 4667778989888876
Q ss_pred -----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc--CcEEEEEcCcccccccCCCC
Q psy15447 194 -----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY--QARIFVDESVSFGTLGSTGH 266 (457)
Q Consensus 194 -----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~ 266 (457)
.|++++++.+++ .++++|++++++|++|.+.|+++|.++|++| |+++|+||+|++|...
T Consensus 119 ~~~~~~d~~~l~~~l~~----------~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~---- 184 (385)
T 2bkw_A 119 KIGESVPLELITEKLSQ----------NSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEE---- 184 (385)
T ss_dssp STTSCCCHHHHHHHHHH----------SCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSC----
T ss_pred CCCCCCCHHHHHHHHhc----------CCCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCcc----
Confidence 378999998864 2356888999999999999999999999999 9999999999865321
Q ss_pred ccccccCCCCCCccEEEecCccccc-Ccc-cEEEecHHHHH-HHHh----------------------hCCc-ceecCCC
Q psy15447 267 GVTEYFGVSTEEVDMIIGSLEHALG-SVG-GFCVGSSYIIE-HHRL----------------------SGSG-YCFSASL 320 (457)
Q Consensus 267 ~~~~~~~~~~~~~Di~~~s~sK~lg-~~g-G~v~~~~~~~~-~~~~----------------------~~~~-~~~~~~~ 320 (457)
.++...++|+++.|++|+++ +.| |+++++++.++ .++. ...+ ..+.++.
T Consensus 185 -----~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (385)
T 2bkw_A 185 -----FEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATP 259 (385)
T ss_dssp -----CCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCC
T ss_pred -----ccccccCceEEEecCccccccCCcceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCC
Confidence 11222245899999999885 455 89999887766 4310 0000 0112345
Q ss_pred cHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHh-hcccccCCeEEecc-----CCCCeEEEEecCCcchHHHHHH
Q psy15447 321 PPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLL-SQHKVTQRFLVQGH-----RDTPLKYLYLQKSDDEVASKKL 392 (457)
Q Consensus 321 ~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L-~~~~~~~~~~~~~~-----~~~~~~~i~~~~~~~~~~~~~~ 392 (457)
++..++++.++++.+.+. ++.+++++++++++.+.| ++ + ++.+..+ ..++++++.+++
T Consensus 260 ~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~-g~~~~~~~~~~~~~~~~~~~~~~~---------- 325 (385)
T 2bkw_A 260 PVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNG---L-QLTSVSRYPSNMSAHGLTAVYVAD---------- 325 (385)
T ss_dssp CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTT---T-CCEESSCSSSTTBCSSCEEEECSC----------
T ss_pred CHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHh---c-CceecccCcccccCCceEEEecCC----------
Confidence 777777777888776532 456788999999999999 87 3 7776532 246778887653
Q ss_pred HHHHHHHHHHcCeeEeccccCccccCCCCCeEEEE-ec---CCCCHHHHHHHHHHHHHHHHH
Q psy15447 393 LQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRIT-CN---ISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 393 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~-~~---~~~t~edi~~~~~~l~~~~~~ 450 (457)
..++.+.|.++||.+.++..+ ....+.+|++ ++ ..+|++|+++++++|++++++
T Consensus 326 ~~~~~~~l~~~gi~v~~g~~~----~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 326 PPDVIAFLKSHGVVIAGGIHK----DIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp HHHHHHHHHHTTEECBCCCCT----TTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCeEEeCCCCc----ccCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 246888899999999876432 1234789999 55 257999999999999988654
No 155
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.96 E-value=2.9e-28 Score=240.96 Aligned_cols=328 Identities=12% Similarity=0.045 Sum_probs=222.7
Q ss_pred CeeeEEeecCCccCC----CCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc-C----CCcEEE--ec
Q psy15447 79 GIPCINFATHNYLSF----VENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM-G----LEETAL--YS 147 (457)
Q Consensus 79 G~~~id~~s~~~l~~----~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g----~~~~i~--~~ 147 (457)
|.+++||+++.|++. ..+|.+.+++.+++++... .+ |+......++++.+++++ + .+++++ ++
T Consensus 25 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~----y~~~~g~~~lr~~la~~~~~~~~~~~~v~~~~~~ 98 (394)
T 2ay1_A 25 RQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETT--KT----YAGLSGEPEFQKAMGELILGDGLKSETTATLATV 98 (394)
T ss_dssp CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCC--CC----CCCSSCCHHHHHHHHHHHHGGGCCGGGEEEEEEE
T ss_pred CccccccccceeeCCCCCccCcHHHHHHHHHhcCCccc--CC----CCCCCCcHHHHHHHHHHHhCCCCCcccEEEEecC
Confidence 567899999887543 3468999999988865211 11 112222466777777765 4 356677 88
Q ss_pred ccHHHHHHHHHhhcC--CCCEEEEeCcccHHHHHHHHhcCCeEEEecC---C----CHHHHHHHHHhhchhcccCCCCcc
Q psy15447 148 FGFSTSASAIAAYVK--RNDAVFVDENINFAIQTGLIASRCKVQYFKH---N----NMQHLEELLRQQDERDTLNSKVTK 218 (457)
Q Consensus 148 sG~~a~~~ai~a~~~--~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~---~----d~~~le~~l~~~~~~~~~~~~~~~ 218 (457)
+|++|+..+++++.. +||.|++..++|..+...+...|.++..++. + |++++++.+++.. +.+
T Consensus 99 g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--------~~~ 170 (394)
T 2ay1_A 99 GGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAK--------KGD 170 (394)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCC--------TTC
T ss_pred CchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHhCC--------CCC
Confidence 899999999887754 8999999999999988888888988888776 3 7899999887531 245
Q ss_pred EEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCc-cccccCCCCCCccEEEecCcccccCcc
Q psy15447 219 KFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGSVG 294 (457)
Q Consensus 219 ~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~~g 294 (457)
+++++++++||+|.+.| +++|+++|++||+++|+||+|+.+.++..... ....+....++ +++++|+||++|.+|
T Consensus 171 ~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G 249 (394)
T 2ay1_A 171 MVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPE-VLIAASCSKNFGIYR 249 (394)
T ss_dssp EEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSS-EEEEEECTTTTTCGG
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCC-EEEEEeccCCCcCcC
Confidence 77888999999999987 56889999999999999999986544210011 11111110112 488999999998666
Q ss_pred ---cEEEe---cHHHHHHHHhhC---CcceecCCCcHHHHHHHHHHHHHH-------hhCcHHHHHHHHHHHHHHHHhhc
Q psy15447 295 ---GFCVG---SSYIIEHHRLSG---SGYCFSASLPPFLAVAANKALHLL-------KANPSLLTKLREKCNTMHSLLSQ 358 (457)
Q Consensus 295 ---G~v~~---~~~~~~~~~~~~---~~~~~~~~~~~~~~aaa~a~l~~~-------~~~~~~~~~l~~~~~~l~~~L~~ 358 (457)
||+++ ++++++.+.... ....++ +.+++.++++.++++.. +..++++++++++.+++.+.|++
T Consensus 250 ~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 328 (394)
T 2ay1_A 250 ERTGCLLALCADAATRELAQGAMAFLNRQTYS-FPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRD 328 (394)
T ss_dssp GCEEEEEEECSSHHHHHHHHHHHHHHHHTTTS-SCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccceEEEEeCCHHHHHHHHHHHHHHHhhhcC-CCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 89887 665544332110 111222 23667777777776533 12245678888889999998887
Q ss_pred ccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHH
Q psy15447 359 HKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMN 438 (457)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~ 438 (457)
+....++.+..+..+.++++.+. . ..+.+.|.++||++.+ .+|++++ .+|++|++
T Consensus 329 ~~~~~~~~~~~~~~g~~~~~~~~--~---------~~~~~~l~~~gi~v~~-------------~~Ris~~-~~~~~~i~ 383 (394)
T 2ay1_A 329 LSGSDRFGFVAEHRGMFSRLGAT--P---------EQVKRIKEEFGIYMVG-------------DSRINIA-GLNDNTIP 383 (394)
T ss_dssp HHTSSTTTHHHHCCSSEEECCCC--H---------HHHHHHHHHHCEECCT-------------TCEEEGG-GCCTTTHH
T ss_pred cCCCCCeeEEcCCceEEEeeCCC--H---------HHHHHHHHhCCEEecC-------------CCeEEee-cCCHhhHH
Confidence 21000244443444666655332 1 2466667788998764 3699987 47999999
Q ss_pred HHHHHHHHH
Q psy15447 439 SLIETLCKS 447 (457)
Q Consensus 439 ~~~~~l~~~ 447 (457)
+++++|+++
T Consensus 384 ~~~~~l~~~ 392 (394)
T 2ay1_A 384 ILARAIIEV 392 (394)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 999999875
No 156
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.96 E-value=3.6e-27 Score=235.51 Aligned_cols=346 Identities=11% Similarity=0.044 Sum_probs=230.0
Q ss_pred eEEeecCCccC--CCCChhhHHHHH--HHHHhcCCCCCCCCCcc-cChHHHHHHHHHHHhhcCCC--cEEEecccHHHHH
Q psy15447 82 CINFATHNYLS--FVENPDIEKCAI--DCIDKNGVGSCGPRGFY-GTNVVHLDLENDIASFMGLE--ETALYSFGFSTSA 154 (457)
Q Consensus 82 ~id~~s~~~l~--~~~~p~i~~a~~--~~l~~~~~~~~~~~~~~-g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~ 154 (457)
.+||+.+.+-. +..++++.+++. +.++ .+.. ...| +......+|++.++++++.+ .+++++++++++.
T Consensus 27 ~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~-~~~~----~~~Yp~~~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~ 101 (423)
T 3ez1_A 27 NLNMQRGQPADADFDLSNGLLTVLGAEDVRM-DGLD----LRNYPGGVAGLPSARALFAGYLDVKAENVLVWNNSSLELQ 101 (423)
T ss_dssp CEESCCCCCCHHHHHTTGGGGGSCCGGGCEE-TTEE----TTSSCSCTTCCHHHHHHHHHHTTSCGGGEEECSSCHHHHH
T ss_pred eEecCCCCCChHhCCCcHHHHHHHhhhHHhh-cchh----hhCCCCCCCChHHHHHHHHHHhCCChhhEEEeCCcHHHHH
Confidence 57887654411 223456777764 3333 1211 1122 33344578999999998854 5666777778887
Q ss_pred --HHHHhhcC--C---------CCEEEEeCcccHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCc
Q psy15447 155 --SAIAAYVK--R---------NDAVFVDENINFAIQTGLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVT 217 (457)
Q Consensus 155 --~ai~a~~~--~---------gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~ 217 (457)
.++.+++. + ||.|++..++|..+...+...|.++..++.+ |++++++.+++. ++
T Consensus 102 ~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~---------~~ 172 (423)
T 3ez1_A 102 GLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSDGPDVDAVERLAGTD---------PS 172 (423)
T ss_dssp HHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETTEECHHHHHHHHHSC---------TT
T ss_pred HHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCCCCCHHHHHHHHhhC---------CC
Confidence 78888877 7 5999999999999999999999988877653 899999998631 34
Q ss_pred cEEEEEe-cCCCCCCCCCChH---HHHHHH-HHcCcEEEEEcCcccccccC-CCCccccccCC----CCCCccEEEecCc
Q psy15447 218 KKFIIVE-GVYMNSADICPLK---DILSLR-SKYQARIFVDESVSFGTLGS-TGHGVTEYFGV----STEEVDMIIGSLE 287 (457)
Q Consensus 218 ~~~vi~e-~v~~~~G~i~~l~---~i~~l~-~~~g~~li~DEa~~~g~~g~-~g~~~~~~~~~----~~~~~Di~~~s~s 287 (457)
+++|++. +++||+|.+.|.+ +|+++| ++||+++|+||+|+...++. .+......+.+ ...+.+++++|||
T Consensus 173 ~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s 252 (423)
T 3ez1_A 173 VKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTS 252 (423)
T ss_dssp EEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEEST
T ss_pred ceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCch
Confidence 5666654 7899999999966 888888 99999999999998544433 11111111111 1124469999999
Q ss_pred ccc--cCcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH-H----hhCcHHHHHHHHHHHHHHHHhhc-c
Q psy15447 288 HAL--GSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHL-L----KANPSLLTKLREKCNTMHSLLSQ-H 359 (457)
Q Consensus 288 K~l--g~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~-~----~~~~~~~~~l~~~~~~l~~~L~~-~ 359 (457)
|++ |.+.||+++++++++.++....... .+.+++.++++.+.++. . +...+.++.++++.+.+.+.|.+ +
T Consensus 253 K~~~~G~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l 330 (423)
T 3ez1_A 253 KITFAGAGLGFVASSEDNIRWLSKYLGAQS--IGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAEL 330 (423)
T ss_dssp TTSCSSSSCEEEEECHHHHHHHHHHHHHSC--SCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCCcceEEEEeCHHHHHHHHHHHhhhc--cCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 974 2345999999999888865432222 23477776666666654 1 11122344455555555555433 1
Q ss_pred cccC-CeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEec-cccCccccCCCCCeEEEEecCCCCHHHH
Q psy15447 360 KVTQ-RFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITC-PSHLDQEAKKQKPSIRITCNISHTEQDM 437 (457)
Q Consensus 360 ~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~-~~~~~~~~~~~~~~lRi~~~~~~t~edi 437 (457)
.... ++.+..+..+.++++.+... ....+.+.|.++||++++ +.++........+++||+++.. +++++
T Consensus 331 ~~~~~~~~~~~p~~g~~~~~~~~~~--------~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~-~~~~i 401 (423)
T 3ez1_A 331 GEGGEYATWTLPKGGYFISLDTAEP--------VADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP-PVEEV 401 (423)
T ss_dssp TTTTSSEEECCCSBSSCEEEEESSS--------CHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS-CHHHH
T ss_pred CcCCCceEEeCCCccEEEEEECCCC--------cHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCC-CHHHH
Confidence 1122 37766566788888888754 234678889999999988 4332111112468999999765 99999
Q ss_pred HHHHHHHHHHHHHhc
Q psy15447 438 NSLIETLCKSHDIAV 452 (457)
Q Consensus 438 ~~~~~~l~~~~~~~~ 452 (457)
++++++|+++++++.
T Consensus 402 ~~~~~~l~~~l~~~~ 416 (423)
T 3ez1_A 402 RTAMQVVAACIRLAT 416 (423)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988764
No 157
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.96 E-value=4.1e-26 Score=227.46 Aligned_cols=318 Identities=14% Similarity=0.105 Sum_probs=230.7
Q ss_pred ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCccc
Q psy15447 96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENIN 174 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h 174 (457)
+|++.+++.+++++...+. +....|..+...++++.+++++|.+.++++++|++|+..++.++ .++||.|++..+.|
T Consensus 15 ~~~~~~a~~~~~~~~~~~~--~~~~~g~~~l~~~l~~~la~~~g~~~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~ 92 (418)
T 2c81_A 15 SDRTRRKIEEVFQSNRWAI--SGYWTGEESMERKFAKAFADFNGVPYCVPTTSGSTALMLALEALGIGEGDEVIVPSLTW 92 (418)
T ss_dssp CHHHHHHHHHHHHHTCCST--TSBCCSSCCHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSC
T ss_pred CHHHHHHHHHHHhcCCccc--cCcccCCHHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCcc
Confidence 5899999999998743321 22235667778999999999999998999999999999999999 89999999999999
Q ss_pred HHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCc
Q psy15447 175 FAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQA 248 (457)
Q Consensus 175 ~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~ 248 (457)
.++...+...|.+++.++.+ |++++++.+++ ++++|+++ +++|...++++|.++|++||+
T Consensus 93 ~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-----------~~~~v~~~---~~~G~~~~~~~i~~~~~~~~~ 158 (418)
T 2c81_A 93 IATATAVLNVNALPVFVDVEADTYCIDPQLIKSAITD-----------KTKAIIPV---HLFGSMANMDEINEIAQEHNL 158 (418)
T ss_dssp THHHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCT-----------TEEEECCB---CCTTCCCCHHHHHHHHHHTTC
T ss_pred HhHHHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCC-----------CCeEEEEe---CCcCCcccHHHHHHHHHHCCC
Confidence 99999999999998887754 67777766642 34666654 478999999999999999999
Q ss_pred EEEEEcCccccc-ccCCCCccccccCCCCCCccEEEecC--cccccC-cccEEEec-HHHHHHHHhhC-Cc---------
Q psy15447 249 RIFVDESVSFGT-LGSTGHGVTEYFGVSTEEVDMIIGSL--EHALGS-VGGFCVGS-SYIIEHHRLSG-SG--------- 313 (457)
Q Consensus 249 ~li~DEa~~~g~-~g~~g~~~~~~~~~~~~~~Di~~~s~--sK~lg~-~gG~v~~~-~~~~~~~~~~~-~~--------- 313 (457)
++|+||+|+.|. +. +.. .+.- .|+++.|| +|++|+ .||+++++ +++++.++... .+
T Consensus 159 ~li~D~a~~~~~~~~--~~~----~~~~---~~~~~~s~s~~K~~~~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 229 (418)
T 2c81_A 159 FVIEDCAQSHGSVWN--NQR----AGTI---GDIGAFSCQQGKVLTAGEGGIIVTKNPRLFELIQQLRADSRVYCDDSSE 229 (418)
T ss_dssp EEEEECTTCTTCEET--TEE----TTSS---SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHHBTTEEECSCGGG
T ss_pred EEEEECcccccCccC--CEe----cccc---cceEEEeccCCcccCCCCeEEEEECCHHHHHHHHHHHHhCccccccccc
Confidence 999999998775 32 111 1111 15777788 999975 66888884 77777664321 11
Q ss_pred ----ce----------ecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCC------
Q psy15447 314 ----YC----------FSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDT------ 373 (457)
Q Consensus 314 ----~~----------~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~------ 373 (457)
+. +...++++.++.....++.+ ++..++.+++.+++.+.|++ ++++.+..++.+
T Consensus 230 ~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~---~~~~~~~~~~~~~l~~~L~~---~~g~~~~~~~~~~~~~~~ 303 (418)
T 2c81_A 230 LMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQEL---DDKNAIREKNAMFLNDALSK---IDGIKVMKRPPQVSRQTY 303 (418)
T ss_dssp CCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHTTH---HHHHHHHHHHHHHHHHHHTT---STTEEECCCCTTEEECCC
T ss_pred cccchhhccccccccCcCCCcCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhcc---CCCcccCCCCCCCccccc
Confidence 11 11114555555444444333 34677888889999999988 568877533322
Q ss_pred CeEEEEecC----CcchHHHHHHHHHHHHHHHHc-Cee---EeccccCccccC-----------------------CC--
Q psy15447 374 PLKYLYLQK----SDDEVASKKLLQTICDMCIQA-GFA---ITCPSHLDQEAK-----------------------KQ-- 420 (457)
Q Consensus 374 ~~~~i~~~~----~~~~~~~~~~~~~~~~~l~~~-Gi~---v~~~~~~~~~~~-----------------------~~-- 420 (457)
.++.+.+++ .. ...++.+.|.++ ||. ++++..|....+ ..
T Consensus 304 ~~~~~~~~~~~~~~~-------~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (418)
T 2c81_A 304 YGYVFRFDPVKFGGL-------NADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYP 376 (418)
T ss_dssp SEEEEEECGGGTTTC-------CHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCH
T ss_pred EEEEEEEcccccccc-------CHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCCh
Confidence 245566653 22 345799999999 999 877653321000 00
Q ss_pred ------CCeEEEEecCCC-CHHHHHHHHHHHHHHHHHh
Q psy15447 421 ------KPSIRITCNISH-TEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 421 ------~~~lRi~~~~~~-t~edi~~~~~~l~~~~~~~ 451 (457)
.+.+|++++..+ |++|+++++++|+++++++
T Consensus 377 ~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~ 414 (418)
T 2c81_A 377 VSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARKF 414 (418)
T ss_dssp HHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHhh
Confidence 258999999999 9999999999999988754
No 158
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.96 E-value=5.5e-27 Score=226.76 Aligned_cols=303 Identities=12% Similarity=0.100 Sum_probs=223.7
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC---C--CcEEEecccHHHHH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG---L--EETALYSFGFSTSA 154 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g---~--~~~i~~~sG~~a~~ 154 (457)
++++||.++.+ .+..+|++.+++.+++.+.+.. + |+.. ...++++.++++++ . +.++++++|++++.
T Consensus 19 ~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~--~----y~~~-~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~ 90 (335)
T 1uu1_A 19 RDKTYLALNEN-PFPFPEDLVDEVFRRLNSDALR--I----YYDS-PDEELIEKILSYLDTDFLSKNNVSVGNGADEIIY 90 (335)
T ss_dssp CCSEEESSCCC-SSCCCHHHHHHHHHTCCGGGGG--S----CCCS-SCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHH
T ss_pred CcceECCCCCC-CCCCCHHHHHHHHHHhhhhhhh--c----CCCC-chHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHH
Confidence 46899988755 4456799999999887432211 1 1111 25789999999988 3 45677778889999
Q ss_pred HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447 155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN 229 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~ 229 (457)
.++.++ ||.|++. +.|..+...++..|.++..++.+ |++++ +++++|++.+++||
T Consensus 91 ~~~~~~---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l----------------~~~~~v~l~~p~np 150 (335)
T 1uu1_A 91 VMMLMF---DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNV----------------GEGDVVFIPNPNNP 150 (335)
T ss_dssp HHHHHS---SEEEECS-SSCHHHHHHHHHHTCEEEECCCCTTSCCCCCCC----------------CTTEEEEEESSCTT
T ss_pred HHHHHh---CCcEEEC-CCcHHHHHHHHHcCCeEEEeccCCCCCCCHHHc----------------CCCCEEEEeCCCCC
Confidence 999888 8999999 99999888888889998888753 22222 13467776777999
Q ss_pred CCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHH
Q psy15447 230 SADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEH 306 (457)
Q Consensus 230 ~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~ 306 (457)
+|.+.|.+++.++++.+| ++|+||+|+.+..+ ......+. .+.+++++|+||++|.+| ||+++++++++.
T Consensus 151 tG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~----~~~~~~~~--~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~ 223 (335)
T 1uu1_A 151 TGHVFEREEIERILKTGA-FVALDEAYYEFHGE----SYVDFLKK--YENLAVIRTFSKAFSLAAQRVGYVVASEKFIDA 223 (335)
T ss_dssp TCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCC----CCGGGGGT--CSSEEEEEESTTTTTCGGGCCEEEEECHHHHHH
T ss_pred CCCCCCHHHHHHHHHhCC-EEEEECcchhhcch----hHHHHhhh--CCCEEEEecchhhcCCcccCeEEEEeCHHHHHH
Confidence 999999999999999989 99999999843221 12222222 234788999999998655 999999999988
Q ss_pred HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch
Q psy15447 307 HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE 386 (457)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 386 (457)
++..... + +.+++.++++.++++..+..++.+++++++.+++.+.|++ .|+.+. ++.++++++.++. .
T Consensus 224 l~~~~~~--~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~~~~~~~~~-~-- 291 (335)
T 1uu1_A 224 YNRVRLP--F--NVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALRE----MGYRIT-DSRGNFVFVFMEK-E-- 291 (335)
T ss_dssp HHHHSCT--T--CSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH----HTCCBC-CCCSSEEEEECCT-H--
T ss_pred HHHhcCC--C--CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH----CCcEEc-CCCCeEEEEECCC-C--
Confidence 8765433 2 4588888888888765332345778888999999999988 255543 4567788877654 2
Q ss_pred HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 387 VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 387 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
...++.+.|.++||.+.+. .+++|++++ +++|+++++++|+++
T Consensus 292 -----~~~~~~~~l~~~gi~v~~~----------~~~iRis~~---~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 292 -----EKERLLEHLRTKNVAVRSF----------REGVRITIG---KREENDMILRELEVF 334 (335)
T ss_dssp -----HHHHHHHHHHHHTEEEEEE----------TTEEEEECC---CHHHHHHHHHHHHCC
T ss_pred -----CHHHHHHHHHHCCEEEEEC----------CCeEEEEeC---CHHHHHHHHHHHHhh
Confidence 4567889999999999872 368999985 578899999998753
No 159
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.96 E-value=8.3e-27 Score=228.82 Aligned_cols=306 Identities=13% Similarity=0.120 Sum_probs=222.3
Q ss_pred hHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccHHH
Q psy15447 99 IEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINFAI 177 (457)
Q Consensus 99 i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~~~ 177 (457)
+.+++.+.+.... |+..+...++++.++++++.+.++++++|++|+..++.++ .++||.|++..+.|.++
T Consensus 21 ~~~~~~~~~~~~~---------~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~~~~~~~~~gd~v~~~~~~~~~~ 91 (374)
T 3uwc_A 21 YLNDLREFIKTAD---------FTLGAELEKFEKRFAALHNAPHAIGVGTGTDALAMSFKMLNIGAGDEVITCANTFIAS 91 (374)
T ss_dssp HHHHHHHHHHHTC---------CSSCHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHH
T ss_pred HHHHHHHHHHcCC---------cccChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHH
Confidence 7777777776521 2346778999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEE
Q psy15447 178 QTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFV 252 (457)
Q Consensus 178 ~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~ 252 (457)
...+...|.++..++.+ |++++++.+++ ++++|+ ++|++|.+.|+++|+++|++||+++|+
T Consensus 92 ~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~-----------~~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~ 157 (374)
T 3uwc_A 92 VGAIVQAGATPVLVDSENGYVIDPEKIEAAITD-----------KTKAIM---PVHYTGNIADMPALAKIAKKHNLHIVE 157 (374)
T ss_dssp HHHHHHTTCEEEEECBCTTSSBCGGGTGGGCCT-----------TEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHcCCEEEEEecCCCCCcCHHHHHHhCCC-----------CceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEE
Confidence 99999999999988875 77887776642 345665 667899999999999999999999999
Q ss_pred EcCcccccccCCCCccccccCCCCCCccEEEecCc--ccccC--cccEEEec-HHHHHHHHhhCCc----------ceec
Q psy15447 253 DESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE--HALGS--VGGFCVGS-SYIIEHHRLSGSG----------YCFS 317 (457)
Q Consensus 253 DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s--K~lg~--~gG~v~~~-~~~~~~~~~~~~~----------~~~~ 317 (457)
||+|+.|..-. + ...+. ..|+++.|++ |++|+ .||+++++ +++.+.++..... ..+.
T Consensus 158 D~~~~~g~~~~-~----~~~~~---~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (374)
T 3uwc_A 158 DACQTILGRIN-D----KFVGS---WGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGIN 229 (374)
T ss_dssp ECTTCTTCEET-T----EETTS---SSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCB
T ss_pred eCCCccCceeC-C----eeccc---cccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHHhcCccccCcccccccc
Confidence 99998764310 1 12221 1389999977 99975 36777765 4666665432210 1122
Q ss_pred CCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCC-eEEeccCCC-----CeEEEEecCCcchHHHHH
Q psy15447 318 ASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQR-FLVQGHRDT-----PLKYLYLQKSDDEVASKK 391 (457)
Q Consensus 318 ~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~-~~~~~~~~~-----~~~~i~~~~~~~~~~~~~ 391 (457)
..++++.++++...++.+ ++..++.+++.+++.+.|++ ..+ +.+...... ..+.+...
T Consensus 230 ~~~~~~~aa~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 293 (374)
T 3uwc_A 230 CRMDTIQAVIANRLMNQL---ETITEKRRGIAHLYDQSFVD---LSEFIDVPVRREGVYHVFHIYVLRVK---------- 293 (374)
T ss_dssp CBCCHHHHHHHHHHGGGH---HHHHHHHHHHHHHHHHHTGG---GTTTEECCCCCTTEECCCSSEEEEET----------
T ss_pred CCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhcc---CCCeEEeccCCCCCceeeEEEEEEcC----------
Confidence 235777766665554433 34678888999999999988 445 665422211 22333322
Q ss_pred HHHHHHHHHHHcCeeEeccc-cCccccCC-----------------CCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 392 LLQTICDMCIQAGFAITCPS-HLDQEAKK-----------------QKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 392 ~~~~~~~~l~~~Gi~v~~~~-~~~~~~~~-----------------~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
...++.+.|.++||.+++.. .|....+. ..+.+|++++..+|++||++++++|++++++.
T Consensus 294 ~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~~ 371 (374)
T 3uwc_A 294 YRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLEK 371 (374)
T ss_dssp THHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 23578899999999988764 11110000 02689999999999999999999999988753
No 160
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.96 E-value=2.4e-26 Score=231.75 Aligned_cols=343 Identities=10% Similarity=0.034 Sum_probs=226.2
Q ss_pred CCeeeEEeecCCc-cCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHH
Q psy15447 78 NGIPCINFATHNY-LSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASA 156 (457)
Q Consensus 78 ~G~~~id~~s~~~-l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~a 156 (457)
.|+.|+||.++.. ... .+++.+++. . +. ..|+..+...+|+++++++++.+.++++++|++|+..+
T Consensus 40 ~~~~ylD~~~~~~~~~~--~~~~~~a~~----~-~~------~~y~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~a 106 (456)
T 2ez2_A 40 SKDIYIDLLTDSGTNAM--SDKQWAGMM----M-GD------EAYAGSENFYHLERTVQELFGFKHIVPTHQGRGAENLL 106 (456)
T ss_dssp GGGCSEECSCSSSCCCC--CHHHHHHHT----T-CC------CCSSSCHHHHHHHHHHHHHHCCSEEEEESSHHHHHHHH
T ss_pred cccceeeeccccCCccC--CHHHHHHhh----c-ch------hhcccChhHHHHHHHHHHHhCCCcEEEeCCcHHHHHHH
Confidence 5778999977532 222 344444433 2 11 12334667889999999999999999999999999999
Q ss_pred HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC---------------CCHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447 157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH---------------NNMQHLEELLRQQDERDTLNSKVTKKFI 221 (457)
Q Consensus 157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~---------------~d~~~le~~l~~~~~~~~~~~~~~~~~v 221 (457)
+++++++|| |+.+..+|.++...+...|.++..++. .|+++|++.+++... ..+++|
T Consensus 107 l~~l~~~gd-i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~-------~~~~~v 178 (456)
T 2ez2_A 107 SQLAIKPGQ-YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGA-------ENIAYI 178 (456)
T ss_dssp HHHHCCTTC-EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCG-------GGEEEE
T ss_pred HHHhCCCCC-EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccc-------cceeEE
Confidence 999999999 544444448888888999988877642 278999999875321 235788
Q ss_pred EEecCCC-CCCCCCC---hHHHHHHHHHcCcEEEEEcCccccc--------ccCCCCcccc---ccCCCCCCccEEEecC
Q psy15447 222 IVEGVYM-NSADICP---LKDILSLRSKYQARIFVDESVSFGT--------LGSTGHGVTE---YFGVSTEEVDMIIGSL 286 (457)
Q Consensus 222 i~e~v~~-~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~--------~g~~g~~~~~---~~~~~~~~~Di~~~s~ 286 (457)
++++++| ++|.+.+ +++|+++|++||++||+||+|++|. .+..|..+.. ..+.. .|+++.|+
T Consensus 179 ~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~---~d~~~~S~ 255 (456)
T 2ez2_A 179 CLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSY---ADGCTMSG 255 (456)
T ss_dssp EEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTT---CSEEEEET
T ss_pred EEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhccc---CCEEEEeC
Confidence 8887777 8999887 9999999999999999999998751 2222322110 11221 26777688
Q ss_pred cccccCc-ccEEEe-cHHHHHHHHhhC---CcceecCCCcHHHHHH-HHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccc
Q psy15447 287 EHALGSV-GGFCVG-SSYIIEHHRLSG---SGYCFSASLPPFLAVA-ANKALHLLKANPSLLTKLREKCNTMHSLLSQHK 360 (457)
Q Consensus 287 sK~lg~~-gG~v~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~aa-a~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~ 360 (457)
+|..+.+ ||++++ ++++++.+.... .++....+.++..+++ +.+.++.++ ++..++.+++.+++.+.|++
T Consensus 256 kk~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~--~~~~~~~~~~~~~l~~~L~~-- 331 (456)
T 2ez2_A 256 KKDCLVNIGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ--YEYIEHRVKQVRYLGDKLKA-- 331 (456)
T ss_dssp TTTTCCSSCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHH--
T ss_pred cccCCCCceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHhc--
Confidence 8876643 799888 678877664321 1111111223333333 444444332 35677778888999999988
Q ss_pred ccCCeEEeccCCCCeEEEEec---CCcchHHHHHHHHHHHHHH-HHcCeeEec-cccCcc-------ccCCCCCeEEEEe
Q psy15447 361 VTQRFLVQGHRDTPLKYLYLQ---KSDDEVASKKLLQTICDMC-IQAGFAITC-PSHLDQ-------EAKKQKPSIRITC 428 (457)
Q Consensus 361 ~~~~~~~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~-~~~~~~-------~~~~~~~~lRi~~ 428 (457)
.|+++..+..+.++++.+. ...+.. ......++++| .++||.+.+ +.++.. ......+++||++
T Consensus 332 --~g~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~ 407 (456)
T 2ez2_A 332 --AGVPIVEPVGGHAVFLDARRFCEHLTQD--EFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTI 407 (456)
T ss_dssp --TTCCBCSSCCSSEEEEEHHHHTTTSCGG--GCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEEC
T ss_pred --CCCccccCCCceEEEEEhHHhcCCCChh--hccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEe
Confidence 4666655556777777763 111100 00134557777 577998644 221100 0012247899999
Q ss_pred cCC-CCHHHHHHHHHHHHHHHHHhc
Q psy15447 429 NIS-HTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 429 ~~~-~t~edi~~~~~~l~~~~~~~~ 452 (457)
+.. +|++|+++++++|+++++...
T Consensus 408 ~~~~~t~e~i~~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 408 PRRVYTYAHMDVVADGIIKLYQHKE 432 (456)
T ss_dssp CTTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred CCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 987 899999999999999987654
No 161
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.95 E-value=2.6e-26 Score=226.89 Aligned_cols=319 Identities=15% Similarity=0.129 Sum_probs=234.8
Q ss_pred eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-
Q psy15447 82 CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY- 160 (457)
Q Consensus 82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~- 160 (457)
+|+|+.. .+ .+++.+++.+++++... +..+...++++.+++++|.+.+++++||++|+..++.++
T Consensus 10 ~i~~~~p---~~--~~~~~~a~~~~~~~~~~---------~~~~~~~~l~~~la~~~~~~~~~~~~~gt~al~~~~~~~~ 75 (393)
T 1mdo_A 10 FLPFSRP---AM--GAEELAAVKTVLDSGWI---------TTGPKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALG 75 (393)
T ss_dssp CBCSCCC---CC--CHHHHHHHHHHHHHTCC---------SSSHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTT
T ss_pred ccccCCC---CC--CHHHHHHHHHHHhcCCc---------CCChHHHHHHHHHHHHhCCCcEEEecChHHHHHHHHHHcC
Confidence 5566551 22 47888999999876321 134677899999999999999999999999999999999
Q ss_pred cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC
Q psy15447 161 VKRNDAVFVDENINFAIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC 234 (457)
Q Consensus 161 ~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~ 234 (457)
.++||.|++..+.|.++...++..|.+++.++. .|++++++.+++ ++++|++++ ++|.+.
T Consensus 76 ~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-----------~~~~v~~~~---~~G~~~ 141 (393)
T 1mdo_A 76 IGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITP-----------QTKAIIPVH---YAGAPA 141 (393)
T ss_dssp CCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-----------TEEEECCBC---GGGCCC
T ss_pred CCCCCEEEeCCCccHhHHHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCC-----------CceEEEEeC---CCCCcC
Confidence 899999999999999999999999999888763 378888887743 346776654 678899
Q ss_pred ChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCc--cccc-CcccEEEec-HHHHHHHHhh
Q psy15447 235 PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE--HALG-SVGGFCVGS-SYIIEHHRLS 310 (457)
Q Consensus 235 ~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s--K~lg-~~gG~v~~~-~~~~~~~~~~ 310 (457)
++++|.++|++||+++|+||+|+.|... .+. .++. .|+++.|++ |+++ +.||+++++ +++++.++..
T Consensus 142 ~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~----~~~~----~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~ 212 (393)
T 1mdo_A 142 DLDAIYALGERYGIPVIEDAAHATGTSY-KGR----HIGA----RGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSL 212 (393)
T ss_dssp CHHHHHHHHHHHTCCBCEECTTCTTCEE-TTE----ETTS----SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCeEEEECccccCCeE-CCe----ecCC----CCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999876432 122 1221 489999999 9885 467888886 7888777543
Q ss_pred CC-c--------------ceec-------CCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEe
Q psy15447 311 GS-G--------------YCFS-------ASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQ 368 (457)
Q Consensus 311 ~~-~--------------~~~~-------~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~ 368 (457)
.. + +.+. ..++++.++++.+.++.++ +..++.+++.+++.+.|++ .++.+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~---~~~~~~~~~~~~l~~~L~~----~~~~~~ 285 (393)
T 1mdo_A 213 KFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLD---ALNARRAAIAAQYHQAMAD----LPFQPL 285 (393)
T ss_dssp TBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHHTHH---HHHHHHHHHHHHHHHHHHT----SSCEEC
T ss_pred HhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhc----CCcccc
Confidence 21 1 1110 2357887777777665543 3667777899999999988 335553
Q ss_pred cc------CCCCeEEEEecC---CcchHHHHHHHHHHHHHHHHcCeeEeccccCccc------------cCC----CCCe
Q psy15447 369 GH------RDTPLKYLYLQK---SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQE------------AKK----QKPS 423 (457)
Q Consensus 369 ~~------~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~------------~~~----~~~~ 423 (457)
.. ..+.++++.++. .. ...++.+.|.++||.++++..|... .+. ....
T Consensus 286 ~~~~~~~~~~~~~~~v~~~~~~~~~-------~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (393)
T 1mdo_A 286 SLPSWEHIHAWHLFIIRVDEARCGI-------TRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERI 358 (393)
T ss_dssp CCCSSCEECCCSCEEEECCHHHHSS-------CHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTE
T ss_pred cCCCCCCCceeEEEEEEeccccccc-------CHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCE
Confidence 21 345578887763 12 3457899999999999876544110 000 1347
Q ss_pred EEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 424 IRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 424 lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+|++++..+|++|+++++++|+++++..
T Consensus 359 lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 386 (393)
T 1mdo_A 359 CSLPLFPDMTESDFDRVITALHQIAGQG 386 (393)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred EEecCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999887544
No 162
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.95 E-value=3.9e-26 Score=222.71 Aligned_cols=309 Identities=15% Similarity=0.113 Sum_probs=225.1
Q ss_pred ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC---cEEEecccHHHHHHHHHhhcCCCCEEEEeCc
Q psy15447 96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE---ETALYSFGFSTSASAIAAYVKRNDAVFVDEN 172 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~ 172 (457)
+|++.+++.+.+.+...+.+ .+ .....+...++++++++++|.+ .+++++||++|+..++.++.++ +.++...+
T Consensus 16 ~~~v~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~~~-~~i~~~~~ 92 (362)
T 3ffr_A 16 YPTVRQHMITALDEKIGVIS-HR-SKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCVEK-KSFHCVNG 92 (362)
T ss_dssp CTTHHHHHHHHHHTTTTTSC-TT-SHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHCSS-EEEEEECS
T ss_pred CHHHHHHHHHHhcCCccCcC-CC-CHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhccCC-cEEEEcCc
Confidence 58899998888875221111 11 1123467788999999999863 4677788999999999999988 76777766
Q ss_pred ccHHH-HHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc
Q psy15447 173 INFAI-QTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY 246 (457)
Q Consensus 173 ~h~~~-~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~ 246 (457)
.|... ...+...|.++..++.+ |+++++ + . +++++|++++++|++|.+.|+++|.++|++|
T Consensus 93 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~--~---~--------~~~~~v~~~~~~nptG~~~~l~~i~~la~~~ 159 (362)
T 3ffr_A 93 SFSKRFYEFAGELGREAYKEEAAFGKGFYPADIT--V---P--------ADAEIICLTHNETSSGVSMPVEDINTFRDKN 159 (362)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCTTCCCCGGGCC--C---C--------TTCCEEEEESEETTTTEECCHHHHTTSGGGS
T ss_pred HHHHHHHHHHHHhCCCeEEEecCCCCCCCHHHHh--c---c--------CCccEEEEEcCCCCcceeCCHHHHHHHHHhC
Confidence 66532 33556678888777643 667776 1 1 4567888889999999999999999999999
Q ss_pred -CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-Ccc-cEEEecHHHHHHHHhhCC-----c-----
Q psy15447 247 -QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVG-GFCVGSSYIIEHHRLSGS-----G----- 313 (457)
Q Consensus 247 -g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~g-G~v~~~~~~~~~~~~~~~-----~----- 313 (457)
|+++|+|++|++|... .++ ..+|+++.|++|+++ +.| |+++.++++++.++.... +
T Consensus 160 p~~~li~D~a~~~~~~~---------~~~--~~~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 228 (362)
T 3ffr_A 160 KDALIFVDAVSSLPYPK---------FDW--TKIDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKSIGTYHTI 228 (362)
T ss_dssp TTSEEEEECTTTTTSSC---------CCT--TSCSEEEEETTSTTCCCSCCEEEEEEHHHHHHHHHHHHTTCCCCSTTSH
T ss_pred CCCEEEEecccccCCcc---------cCh--hHCcEEEEecccccCCCCceEEEEECHHHHHHhhhccccCCCCcccccH
Confidence 9999999999865321 112 226899999999998 555 788889888777654221 0
Q ss_pred ---------ceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEecc----CCCCeEEE
Q psy15447 314 ---------YCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH----RDTPLKYL 378 (457)
Q Consensus 314 ---------~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~----~~~~~~~i 378 (457)
.....+.+....+++.++++.+.+. ++++++.+++.+++.+.|++ .+|+.+..+ ..+.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~g~~~~~~~~~~~~~~~~~~ 305 (362)
T 3ffr_A 229 PSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIES---SKVFSFGVEDAKLRSMTTIVA 305 (362)
T ss_dssp HHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH---CSSEEESSSCGGGBCSSEEEE
T ss_pred HHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHH---ccCceeccCChhhcCCceEEE
Confidence 0112345666666666777765432 46788899999999999988 568887541 23567777
Q ss_pred EecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 379 YLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
.++. . ..++.+.|.++||.++++..+ ...+++|++++..+|++|+++++++|++++
T Consensus 306 ~~~~-~--------~~~~~~~l~~~gi~~~~g~~~-----~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 306 NTTM-L--------PGEINKILEPFDMAVGAGYGS-----KKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp EESS-C--------HHHHHHHHGGGTEEEEECSGG-----GTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred ecCC-C--------HHHHHHHHHHCCeEEecCccc-----cCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 7665 2 347899999999999876432 235799999999999999999999998764
No 163
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.95 E-value=5.8e-27 Score=230.01 Aligned_cols=306 Identities=15% Similarity=0.123 Sum_probs=220.7
Q ss_pred hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccH
Q psy15447 97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINF 175 (457)
Q Consensus 97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~ 175 (457)
|++.+++.+++.... ++..+...++++++++++|.+.+++++||++|+..++.++ .++||.|+++.+.|.
T Consensus 17 ~~~~~a~~~~~~~~~---------~~~~~~~~~l~~~la~~~~~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~ 87 (373)
T 3frk_A 17 YEIKFKFEEIYKRNW---------FILGDEDKKFEQEFADYCNVNYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFI 87 (373)
T ss_dssp HHHHHHHHHHHHHTC---------CSSSHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCT
T ss_pred HHHHHHHHHHHHCCC---------ccCCchHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcH
Confidence 566777777766521 2346778999999999999999999999999999999999 899999999999999
Q ss_pred HHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcE
Q psy15447 176 AIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR 249 (457)
Q Consensus 176 ~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~ 249 (457)
++...++..|.++..++.+ |++++++.+++ ++++|+ ++|++|.+.|+++|.++|++||++
T Consensus 88 ~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~-----------~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~ 153 (373)
T 3frk_A 88 ATALAVSYTGAKPIFVEPDIRTYNIDPSLIESAITE-----------KTKAII---AVHLYGQPADMDEIKRIAKKYNLK 153 (373)
T ss_dssp HHHHHHHHHSCEEEEECEETTTTEECGGGTGGGCCT-----------TEEEEE---EECCTTCCCCHHHHHHHHHHHTCE
T ss_pred HHHHHHHHcCCEEEEEeccccccCcCHHHHHHhcCC-----------CCeEEE---EECCCcCcccHHHHHHHHHHcCCE
Confidence 9999999999999888765 78888776642 445666 456889999999999999999999
Q ss_pred EEEEcCcccccccCCCCccccccCCCCCCccEEEecCc--ccccC--cccEEEec-HHHHHHHHhh---CCc-------c
Q psy15447 250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE--HALGS--VGGFCVGS-SYIIEHHRLS---GSG-------Y 314 (457)
Q Consensus 250 li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s--K~lg~--~gG~v~~~-~~~~~~~~~~---~~~-------~ 314 (457)
+|+||+|++|.. ..+. ..+. ..|+++.||+ |++|+ .||+++++ +++.+.++.. +.. .
T Consensus 154 li~D~a~~~g~~-~~~~----~~~~---~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 225 (373)
T 3frk_A 154 LIEDAAQAHGSL-YKGM----KVGS---LGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYK 225 (373)
T ss_dssp EEEECTTCTTCE-ETTE----ETTS---SSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSC
T ss_pred EEEECCcccCCE-ECCE----eccc---cccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHHhcCcccCCccccc
Confidence 999999987654 1111 2222 1378888977 99975 46888776 4566555432 110 1
Q ss_pred eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC-----CCeEEEEecCCcchHHH
Q psy15447 315 CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD-----TPLKYLYLQKSDDEVAS 389 (457)
Q Consensus 315 ~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~ 389 (457)
.+...++++.++.++..++.++ +..++.+++.+++.+.|++ .++.+..... ...+.+...
T Consensus 226 g~~~~~~~~~aa~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~-------- 290 (373)
T 3frk_A 226 GFNSRLDELQAGFLRVKLKYLD---KWNEERRKIAQKYIAGINN----PNVIIPVEADYAKHVWYTFVIRSE-------- 290 (373)
T ss_dssp CCBCCCCHHHHHHHHHHHHTHH---HHHHHHHHHHHHHHHHCCC----TTEECCCCCTTEECCCSSEEEEES--------
T ss_pred cccCCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcc----CceEeccCCCCCceeeEEEEEEeC--------
Confidence 1233468888777766665443 4678888999999999988 3355432211 123333332
Q ss_pred HHHHHHHHHHHHHcCeeEeccc-cCccccC--------C---------CCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 390 KKLLQTICDMCIQAGFAITCPS-HLDQEAK--------K---------QKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 390 ~~~~~~~~~~l~~~Gi~v~~~~-~~~~~~~--------~---------~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
...++.+.|.++||.+++.. .|....+ . ....+|++++..+|++||++++++|+++..+
T Consensus 291 --~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~ 367 (373)
T 3frk_A 291 --KRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLE 367 (373)
T ss_dssp --SHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC--
T ss_pred --CHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhh
Confidence 23578899999999998654 1211000 0 0157999999999999999999999887554
No 164
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.95 E-value=1.9e-26 Score=228.96 Aligned_cols=291 Identities=12% Similarity=0.102 Sum_probs=213.8
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHh----cCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIA----SRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~----~g~~~~~~~~~d~~~ 198 (457)
..+...+|+++++++.|.+.+++++||++|+..++.+++++||.|++..+.|+.+...+.. .|.++..++.+|+++
T Consensus 79 ~~p~~~~l~~~la~~~g~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~ 158 (414)
T 3ndn_A 79 GNPTVSVFEERLRLIEGAPAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQ 158 (414)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTCHHH
T ss_pred CChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCCCHHH
Confidence 5678999999999999999999999999999999999999999999999999887766644 899999999999999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.+++ ++++|++|+++||+|.+.++++|+++|++||++||+||+|+.|.... . ..+ +
T Consensus 159 l~~ai~~-----------~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~---~--~~~-----g 217 (414)
T 3ndn_A 159 WERALSV-----------PTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQ---G--FPL-----G 217 (414)
T ss_dssp HHHHTSS-----------CCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCC---C--GGG-----T
T ss_pred HHHhcCC-----------CCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCC---c--hhc-----C
Confidence 9988853 45789999999999999999999999999999999999998554321 1 112 3
Q ss_pred ccEEEecCcccccCc----ccEEEecHHHHH-HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGSV----GGFCVGSSYIIE-HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 279 ~Di~~~s~sK~lg~~----gG~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~ 353 (457)
+|+++.|++|++|+. +|+++++++.+. .++... ..++.++++..+++++..++.+. .++++..++++++.
T Consensus 218 ~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~--~~~g~~~~~~~a~~~~~~l~~l~---~r~~~~~~~a~~l~ 292 (414)
T 3ndn_A 218 VDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLM--RHTGPAMSAFNAWVLLKGLETLA---IRVQHSNASAQRIA 292 (414)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHH--HHHCCCCCHHHHHHHHHHGGGHH---HHHHHHHHHHHHHH
T ss_pred CCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHH--HHcCCCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 489999999999753 589999887665 444221 12344568888777776665443 36678888999999
Q ss_pred HHhhcccccCCeEEec-c----------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc-
Q psy15447 354 SLLSQHKVTQRFLVQG-H----------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ- 415 (457)
Q Consensus 354 ~~L~~~~~~~~~~~~~-~----------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~- 415 (457)
+.|++ .+++..+. + ..+.++++.++.... .....+.++.+.|...++.+..+...+.
T Consensus 293 ~~L~~---~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~--~~~~~~~~~~~~l~~~~~~~s~G~~~sl~ 367 (414)
T 3ndn_A 293 EFLNG---HPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPED--VAKQRAFEVLDKMRLIDISNNLGDAKSLV 367 (414)
T ss_dssp HHHHT---CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGG--GHHHHHHHHHHHCSSSEECSCCSCSSCEE
T ss_pred HHHhc---CCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCcc--ccHHHHHHHHHhCccceEcCCCCCCCcee
Confidence 99987 34443221 1 136789999875300 0001466788887766766655432111
Q ss_pred -----------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 416 -----------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 416 -----------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
.....++.+|+++.... ++.+++.|++++
T Consensus 368 ~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~e~----~~dli~dl~~al 413 (414)
T 3ndn_A 368 THPATTTHRAMGPEGRAAIGLGDGVVRISVGLED----TDDLIADIDRAL 413 (414)
T ss_dssp ECGGGTTTCTTHHHHHHHTTCCTTEEEEECCSSC----HHHHHHHHHHHH
T ss_pred eCccccccccCCHHHHHhcCCCCCeEEEEeCcCC----HHHHHHHHHHhh
Confidence 01234679999997644 455555555443
No 165
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.95 E-value=2.2e-26 Score=222.11 Aligned_cols=284 Identities=14% Similarity=0.157 Sum_probs=210.0
Q ss_pred HHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHHHHHHHH
Q psy15447 129 DLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQHLEELLR 204 (457)
Q Consensus 129 ~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~le~~l~ 204 (457)
++++++++++|.+..+++++|++|+..++.++.++||.|++..+.|.++...+ ...|.++..++..|++++++.++
T Consensus 2 ~l~~~la~~~g~~~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~ 81 (331)
T 1pff_A 2 ALEGKIAKLEHAEACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLK 81 (331)
T ss_dssp HHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTCC
T ss_pred hHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhc
Confidence 68899999999998999999999999999999999999999999999877665 34789999999889999888774
Q ss_pred hhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHH-cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEE
Q psy15447 205 QQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSK-YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMII 283 (457)
Q Consensus 205 ~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~-~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~ 283 (457)
+++++|++++++|++|.+.|+++|.++|++ ||+++|+||+|+.|.+.. .. .+ +.|+++
T Consensus 82 -----------~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~---~~--~~-----~~d~~~ 140 (331)
T 1pff_A 82 -----------PNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTN---PL--DL-----GVDIVV 140 (331)
T ss_dssp -----------TTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCC---GG--GG-----TCSEEE
T ss_pred -----------CCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCC---hh--hc-----CCcEEE
Confidence 245789999999999999999999999999 999999999998765431 11 12 358999
Q ss_pred ecCcccccCc----ccEEEecH-HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhc
Q psy15447 284 GSLEHALGSV----GGFCVGSS-YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQ 358 (457)
Q Consensus 284 ~s~sK~lg~~----gG~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~ 358 (457)
.|++|++|++ +|++++++ ++++.++.....+ ++.+.+++.++++.++++.+. ...++..++.+.+.+.|++
T Consensus 141 ~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~ 216 (331)
T 1pff_A 141 HSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDI-TGAIISPHDAWLITRGTLTLD---MRVKRAAENAQKVAEFLHE 216 (331)
T ss_dssp EETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCC-CCCCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred EECccccCCCCCceEEEEEeCcHHHHHHHHHHHHhh-cCCCCCHHHHHHHHcCcchHH---HHHHHHHHHHHHHHHHHHc
Confidence 9999999753 68999998 8888887544331 334568887777767766543 2445555566655555543
Q ss_pred cc-----------ccCCeEEec---cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccc---------cCcc
Q psy15447 359 HK-----------VTQRFLVQG---HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPS---------HLDQ 415 (457)
Q Consensus 359 ~~-----------~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~---------~~~~ 415 (457)
.. ..+++.+.. +..++++.+.+.+ ..++.+.|.++||+++... +|..
T Consensus 217 ~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~ 286 (331)
T 1pff_A 217 HKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDG----------LEKAKKVLDNCHVVSLAVSLGGPESLIQHPAS 286 (331)
T ss_dssp CTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS----------HHHHHHHHHTCSSSEECSSCCSSSCEEECHHH
T ss_pred CCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC----------HHHHHHHHHhCCCceeccCCCCcceeeecchh
Confidence 11 012222221 1246788887752 1356777888899876542 2211
Q ss_pred ------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 416 ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 416 ------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
.....++.+|++++..+|++++++++++|+++
T Consensus 287 ~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 287 MTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp HTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred hcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 00112579999999999999999999998754
No 166
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.95 E-value=2.9e-27 Score=237.82 Aligned_cols=336 Identities=13% Similarity=0.093 Sum_probs=214.0
Q ss_pred eEEe-ecCCccCCCCChhhHHHHHHHH-HhcCCCCCCCCCcccChHHHHHHH----HHHHhhcCCCc----E-EEecccH
Q psy15447 82 CINF-ATHNYLSFVENPDIEKCAIDCI-DKNGVGSCGPRGFYGTNVVHLDLE----NDIASFMGLEE----T-ALYSFGF 150 (457)
Q Consensus 82 ~id~-~s~~~l~~~~~p~i~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~----~-i~~~sG~ 150 (457)
.|++ +|.++ .+|+|.+|+...+ .+|+.++.+++...|. +...++| +++++++|.+. + ++++||+
T Consensus 56 ~i~lias~n~----~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~-~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt 130 (490)
T 2a7v_A 56 GLELIASENF----CSRAALEALGSCLNNKYSEGYPGKRYYGGA-EVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGS 130 (490)
T ss_dssp SEECCTTCCC----CCHHHHHHHTSGGGTCCCCC-------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH
T ss_pred CceEECCCCC----CCHHHHHHHHHHHcCCCccCCCcccccCcc-HHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchH
Confidence 3444 45555 2799999998887 4576677777665554 3444555 89999999886 4 4556999
Q ss_pred HHHHHHHHhhcCCCCEEEEeCcccHHHHH--------HHHhcCCe--EEEec------CCCHHHHHHHHHhhchhcccCC
Q psy15447 151 STSASAIAAYVKRNDAVFVDENINFAIQT--------GLIASRCK--VQYFK------HNNMQHLEELLRQQDERDTLNS 214 (457)
Q Consensus 151 ~a~~~ai~a~~~~gd~v~~~~~~h~~~~~--------~~~~~g~~--~~~~~------~~d~~~le~~l~~~~~~~~~~~ 214 (457)
+||..++.+++++||.|++..+.|++... .+..+|.. +..++ ..|++++++.+++.
T Consensus 131 ~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~-------- 202 (490)
T 2a7v_A 131 PANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLF-------- 202 (490)
T ss_dssp HHHHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBCHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhc--------
Confidence 99999999999999999999988765321 23344532 23332 34899999998753
Q ss_pred CCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCc
Q psy15447 215 KVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSV 293 (457)
Q Consensus 215 ~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~ 293 (457)
++++|++....+ |...|+++|+++|++||++|++|++|..|.++. |... ..+ ..+|+++.|+||++ |+.
T Consensus 203 --~~klIi~~~s~~--~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~-g~~~-~~~----~~aDiv~~S~hK~l~Gp~ 272 (490)
T 2a7v_A 203 --RPRLIIAGTSAY--ARLIDYARMREVCDEVKAHLLADMAHISGLVAA-KVIP-SPF----KHADIVTTTTHKTLRGAR 272 (490)
T ss_dssp --CCSEEEECCSSC--CSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHT-TSSC-CGG----GTCSEEEEESSGGGCSCS
T ss_pred --CCcEEEEcCCCC--CCcccHHHHHHHHHHcCCEEEEccccccccccC-CcCC-CCC----CCCCEEEECCcccCcccc
Confidence 234666654443 456799999999999999999999998775432 1111 111 24689999999999 567
Q ss_pred ccEEEecHH---------------HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh--hCcHHHHHHHHHHHHHHHHh
Q psy15447 294 GGFCVGSSY---------------IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK--ANPSLLTKLREKCNTMHSLL 356 (457)
Q Consensus 294 gG~v~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~--~~~~~~~~l~~~~~~l~~~L 356 (457)
||+++++++ +.+.++....+...+ +.++...++..+++.... +.+++.+++.++++++.+.|
T Consensus 273 GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qg-gp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L 351 (490)
T 2a7v_A 273 SGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQG-GPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADAL 351 (490)
T ss_dssp CEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCC-SCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred chheeeccchhcccccccchhhHHHHHHHHHHhcccCCC-CchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 899988764 445555432222222 234444444445555442 22567889999999999999
Q ss_pred hcccccCCeEEecc-CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEec----CC
Q psy15447 357 SQHKVTQRFLVQGH-RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCN----IS 431 (457)
Q Consensus 357 ~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~----~~ 431 (457)
++ .|+.+... ..++++++.+....- ...++.+.|.++||.+.....|....+.....+||+.+ ..
T Consensus 352 ~~----~G~~v~~~~t~t~lv~vdl~~~g~------~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g 421 (490)
T 2a7v_A 352 LE----RGYSLVSGGTDNHLVLVDLRPKGL------DGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQ 421 (490)
T ss_dssp HH----TTCEEGGGSCSSSEEEEECTTTTC------CHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTT
T ss_pred HH----cCcEEecCCCCCeEEEEEeCCCCC------CHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCC
Confidence 98 68888642 457888888764310 24567788888999998654443222334578999664 45
Q ss_pred CCHHHHHHHHHHHHHHHHHh
Q psy15447 432 HTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 432 ~t~edi~~~~~~l~~~~~~~ 451 (457)
++++|++++++.|.++++..
T Consensus 422 ~~~~d~~~~~~~i~~~l~~~ 441 (490)
T 2a7v_A 422 FREDDFRRVVDFIDEGVNIG 441 (490)
T ss_dssp CCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhh
Confidence 79999999999999988643
No 167
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.95 E-value=3.2e-26 Score=224.59 Aligned_cols=316 Identities=13% Similarity=0.134 Sum_probs=225.8
Q ss_pred CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh---cCCCCEEEEeC
Q psy15447 95 ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY---VKRNDAVFVDE 171 (457)
Q Consensus 95 ~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~ 171 (457)
.+|++.+++.+++... ..+ ..+...++++.+++++|.+.+++++||++|+..++.++ .++||.|++..
T Consensus 11 ~~~~v~~a~~~~~~~~-~~~--------~~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~ 81 (375)
T 2fnu_A 11 LDKEDKKAVLEVLNSK-QLT--------QGKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADRNEIITTP 81 (375)
T ss_dssp CCHHHHHHHHHHHTSS-CCS--------SSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECS
T ss_pred CCHHHHHHHHHHHHcC-ccc--------CChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcccCCCCCEEEECC
Confidence 3689999999998652 111 23567899999999999998899999999999999999 88999999999
Q ss_pred cccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc
Q psy15447 172 NINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY 246 (457)
Q Consensus 172 ~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~ 246 (457)
+.|.++...+...|.++..++.+ |++++++.+++ ++++|++.++ +|.+.|+++|.++|++|
T Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~-----------~~~~v~~~~~---tG~~~~l~~i~~l~~~~ 147 (375)
T 2fnu_A 82 ISFVATANMLLESGYTPVFAGIKNDGNIDELALEKLINE-----------RTKAIVSVDY---AGKSVEVESVQKLCKKH 147 (375)
T ss_dssp SSCTHHHHHHHHTTCEEEECCBCTTSSBCGGGSGGGCCT-----------TEEEEEEECG---GGCCCCHHHHHHHHHHH
T ss_pred CccHhHHHHHHHCCCEEEEeccCCCCCCCHHHHHhhcCc-----------CceEEEEeCC---cCCccCHHHHHHHHHHc
Confidence 99999999999999998887753 66777665532 3456665554 79999999999999999
Q ss_pred CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCc--ccccCcccEEEe-c-HHHHHHHHhhCC-c--------
Q psy15447 247 QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE--HALGSVGGFCVG-S-SYIIEHHRLSGS-G-------- 313 (457)
Q Consensus 247 g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s--K~lg~~gG~v~~-~-~~~~~~~~~~~~-~-------- 313 (457)
|+++|+||+|++|.... + ...+..+ |+++.|++ |++|++.|+++. + +++++.++.... +
T Consensus 148 ~~~li~D~a~~~~~~~~-~----~~~~~~~---~i~~~s~s~~K~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (375)
T 2fnu_A 148 SLSFLSDSSHALGSEYQ-N----KKVGGFA---LASVFSFHAIKPITTAEGGAVVTNDSELHEKMKLFRSHGMLKKDFFE 219 (375)
T ss_dssp TCEEEEECTTCTTCEET-T----EETTSSS---SEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTTEEESSSSC
T ss_pred CCEEEEECccccCCeEC-C----eeccccC---CeEEEeCCCCCCccccCceEEEeCCHHHHHHHHHHHhcCCccccccc
Confidence 99999999998765431 1 1122111 57777888 999763355444 3 677776654321 1
Q ss_pred -----ceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-----CCCeEEEEecCC
Q psy15447 314 -----YCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR-----DTPLKYLYLQKS 383 (457)
Q Consensus 314 -----~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~-----~~~~~~i~~~~~ 383 (457)
..+...++++.+++++..++.+ ++..++.+++.+++.+.|++ ++++.+..+. ...++++.++..
T Consensus 220 ~~~~~~~~~~~~~~~~~a~~~~~~~~~---~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (375)
T 2fnu_A 220 GEVKSIGHNFRLNEIQSALGLSQLKKA---PFLMQKREEAALTYDRIFKD---NPYFTPLHPLLKDKSSNHLYPILMHQK 293 (375)
T ss_dssp EEESSCCCBCCCCHHHHHHHHHHHTTH---HHHHHHHHHHHHHHHHHHTT---CSSEEESGGGCSSCCCCSCEEEEECGG
T ss_pred cccccccccCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhhc---CCCccccCCCCCCCcceEEEEEEeCcc
Confidence 1111245777777666554433 34778889999999999998 5678775431 234456666532
Q ss_pred cchHHHHHHHHHHHHHHHHcCeeEeccccCccc--cC--------C------CCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 384 DDEVASKKLLQTICDMCIQAGFAITCPSHLDQE--AK--------K------QKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 384 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~--~~--------~------~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
.. ....++.+.|.++||.++....|... .. . ..+.+|++++..+|++|+++++++|+++
T Consensus 294 ~~-----~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 368 (375)
T 2fnu_A 294 FF-----TCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKT 368 (375)
T ss_dssp GG-----GGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred cc-----chHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHH
Confidence 10 02357889999999998843222110 00 0 1257999999999999999999999999
Q ss_pred HHHhc
Q psy15447 448 HDIAV 452 (457)
Q Consensus 448 ~~~~~ 452 (457)
++.+.
T Consensus 369 ~~~~~ 373 (375)
T 2fnu_A 369 FESFK 373 (375)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 87653
No 168
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.95 E-value=3.4e-27 Score=236.00 Aligned_cols=308 Identities=10% Similarity=-0.002 Sum_probs=215.0
Q ss_pred hHHHHHHHHHHHhhcCCC--cEEEecccHHHH--HHHHHhhcC--C----------CCEEEEeCcccHHHHHHHHhcCCe
Q psy15447 124 NVVHLDLENDIASFMGLE--ETALYSFGFSTS--ASAIAAYVK--R----------NDAVFVDENINFAIQTGLIASRCK 187 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~--~~ai~a~~~--~----------gd~v~~~~~~h~~~~~~~~~~g~~ 187 (457)
..-..+|++.++++++.+ .+++++++++++ ..++.+++. + ||.|++..++|..+...++..|.+
T Consensus 77 ~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~ 156 (427)
T 3ppl_A 77 LDGIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFE 156 (427)
T ss_dssp SSCCHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCE
T ss_pred CCCcHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCE
Confidence 334578888999988754 566666777888 477888766 5 899999999999999999999998
Q ss_pred EEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEe-cCCCCCCCCCChH---HHHHHH-HHcCcEEEEEcCccc
Q psy15447 188 VQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVE-GVYMNSADICPLK---DILSLR-SKYQARIFVDESVSF 258 (457)
Q Consensus 188 ~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e-~v~~~~G~i~~l~---~i~~l~-~~~g~~li~DEa~~~ 258 (457)
++.++.+ |++++++.++. +++++|++. +++||+|.+.|.+ +|+++| ++||+++|+||+|+.
T Consensus 157 ~~~v~~~~~g~d~~~l~~~l~~----------~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~ 226 (427)
T 3ppl_A 157 MISVPMNEDGPDMDAVEELVKN----------PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAV 226 (427)
T ss_dssp EEEEEEETTEECHHHHHHHTTS----------TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTT
T ss_pred EEEeCCCCCCCCHHHHHHHHhc----------CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcc
Confidence 8877643 78899888842 345666655 7889999999966 888888 999999999999987
Q ss_pred ccccCCCCccccccCC----CCCCccEEEecCccccc--CcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHH
Q psy15447 259 GTLGSTGHGVTEYFGV----STEEVDMIIGSLEHALG--SVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKAL 332 (457)
Q Consensus 259 g~~g~~g~~~~~~~~~----~~~~~Di~~~s~sK~lg--~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l 332 (457)
..++..+......+++ ...+.+++++||||+++ .+.||+++++++++.+........+ +.+++.++++.+.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~~l~~~~~~~~~~~~~--~~~~~~q~~~~~~l 304 (427)
T 3ppl_A 227 HTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAENRKWYTGHAGIRGI--GPNKVNQLAHARYF 304 (427)
T ss_dssp CBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCHHHHHHHHHHHHHHCS--CCCHHHHHHHHHHH
T ss_pred cccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCHHHHHHHHHHhhcccC--CCCHHHHHHHHHHH
Confidence 6665433222122211 11345799999999852 3449999999998888654322222 34666666655554
Q ss_pred HH---H-hhCcHHHHHHHHHHHHHHHHhhcc-cccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeE
Q psy15447 333 HL---L-KANPSLLTKLREKCNTMHSLLSQH-KVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAI 407 (457)
Q Consensus 333 ~~---~-~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v 407 (457)
+. + +...+.++.++++.+.+.+.|.+. ....++.+..+..+.++++.++.. ...++.+.|.++||.+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~--------~~~~~~~~l~~~gv~v 376 (427)
T 3ppl_A 305 GDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPG--------TASRVAELAKEAGIAL 376 (427)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECSTT--------CHHHHHHHHHHTTEEC
T ss_pred hChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCcc--------hHHHHHHHHHHCCCEE
Confidence 32 1 112335566666777776666441 112356665566788888888754 2346788899999999
Q ss_pred eccc-cCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 408 TCPS-HLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 408 ~~~~-~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
++++ ++........+++||+++.. +++++++++++|+++++++.
T Consensus 377 ~~~g~~~~~~~~~~~~~~Ris~~~~-~~~~i~~~~~~l~~~l~~~~ 421 (427)
T 3ppl_A 377 TGAGSSYPLRQDPENKNLRLAPSLP-PVEELEVAMDGVATCVLLAA 421 (427)
T ss_dssp CCTTTTSGGGCCTTSCEEEECCSSS-CHHHHHHHHHHHHHHHHHHH
T ss_pred ecCcCcCCCCCCCCCCeEEEECCCC-CHHHHHHHHHHHHHHHHHHH
Confidence 8833 22111112468999999654 99999999999999987663
No 169
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.95 E-value=3e-27 Score=235.12 Aligned_cols=331 Identities=11% Similarity=0.027 Sum_probs=224.2
Q ss_pred CCeeeEEeecCCccCCC----CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc-C-------CCcEEE
Q psy15447 78 NGIPCINFATHNYLSFV----ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM-G-------LEETAL 145 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~----~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g-------~~~~i~ 145 (457)
+|+.++||+.+.|++.. ..|.+.+++.+++++.+.. . .|+......++++.+++++ + .+.+++
T Consensus 28 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~----~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~ 102 (412)
T 1ajs_A 28 PDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLN-H----EYLPILGLAEFRTCASRLALGDDSPALQEKRVGG 102 (412)
T ss_dssp CCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCC-C----CCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEE
T ss_pred CCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhc-c----CCCCCCCCHHHHHHHHHHHhcCCCCccCCCcEEE
Confidence 36789999998875542 3478889888877331111 0 1122223466777777766 3 256788
Q ss_pred --ecccHHHHHHHHH--hhcCCC-----CEEEEeCcccHHHHHHHHhcCCe-EEEecC---C----CHHHHHHHHHhhch
Q psy15447 146 --YSFGFSTSASAIA--AYVKRN-----DAVFVDENINFAIQTGLIASRCK-VQYFKH---N----NMQHLEELLRQQDE 208 (457)
Q Consensus 146 --~~sG~~a~~~ai~--a~~~~g-----d~v~~~~~~h~~~~~~~~~~g~~-~~~~~~---~----d~~~le~~l~~~~~ 208 (457)
+++|++|+..+++ .++++| |.|++..++|..+...+...|.+ +..++. + |++++++.+++..
T Consensus 103 ~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~- 181 (412)
T 1ajs_A 103 VQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAP- 181 (412)
T ss_dssp EEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSC-
T ss_pred EECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCC-
Confidence 8899999998864 446788 99999999998888888888988 887775 3 7899999887532
Q ss_pred hcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCC---Cc-cccccCCCCCCccE
Q psy15447 209 RDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTG---HG-VTEYFGVSTEEVDM 281 (457)
Q Consensus 209 ~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g---~~-~~~~~~~~~~~~Di 281 (457)
.+++++++++++||+|.+.+ +++|+++|++||+++|+||+|+...++ | .. ....+...++ .++
T Consensus 182 -------~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~--~~~~~~~~~~~~~~~~~-~~i 251 (412)
T 1ajs_A 182 -------EFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASG--NLEKDAWAIRYFVSEGF-ELF 251 (412)
T ss_dssp -------TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTS--CHHHHTHHHHHHHHTTC-CEE
T ss_pred -------CCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCC--cccccchHHHHHhccCC-cEE
Confidence 34577888999999999987 568999999999999999998643222 2 11 1111111122 248
Q ss_pred EEecCcccccCcc---cEEEe---cHHH----HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh-------hCcHHHHH
Q psy15447 282 IIGSLEHALGSVG---GFCVG---SSYI----IEHHRLSGSGYCFSASLPPFLAVAANKALHLLK-------ANPSLLTK 344 (457)
Q Consensus 282 ~~~s~sK~lg~~g---G~v~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~-------~~~~~~~~ 344 (457)
++.|+||++|+.| ||+++ ++++ ++.+... ....++ +.+++.++++.++|+... ..++++++
T Consensus 252 ~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 329 (412)
T 1ajs_A 252 CAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKI-VRVTWS-NPPAQGARIVARTLSDPELFHEWTGNVKTMADR 329 (412)
T ss_dssp EEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHH-HHTTTS-SCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred EEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHH-HhcccC-CCChHHHHHHHHHHcCcchhHHHHHHHHHHHHH
Confidence 8999999998766 89888 7764 3333321 111222 236777777777776432 22457788
Q ss_pred HHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeE
Q psy15447 345 LREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSI 424 (457)
Q Consensus 345 l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~l 424 (457)
++++.+++.+.|+++..-.++.+..+..+.+.++.+. ...+...+.++||++.+ .+
T Consensus 330 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~gv~v~~-------------~~ 385 (412)
T 1ajs_A 330 ILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLN-----------PKQVEYLINQKHIYLLP-------------SG 385 (412)
T ss_dssp HHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCC-----------HHHHHHHHHTTCEECCT-------------TS
T ss_pred HHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCCC-----------HHHHHHHHHhCCEEecC-------------Cc
Confidence 8999999999998821000355543444555554322 12344455578998863 26
Q ss_pred EEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 425 RITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 425 Ri~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
|++++. +|++++++++++|+++++++
T Consensus 386 Ris~~~-~~~~~i~~~~~~l~~~l~~~ 411 (412)
T 1ajs_A 386 RINMCG-LTTKNLDYVATSIHEAVTKI 411 (412)
T ss_dssp EEEGGG-CCTTTHHHHHHHHHHHHHHC
T ss_pred EEEeee-CCHHHHHHHHHHHHHHHHhc
Confidence 999874 59999999999999998764
No 170
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.2e-26 Score=236.73 Aligned_cols=338 Identities=8% Similarity=0.052 Sum_probs=239.1
Q ss_pred ecCCccCC--CCChhhHHHHHHHHHhcCCC-CCCCCCcccChHHHHHHHHHHHhhcCCC----cEEEecccHHHHHHHHH
Q psy15447 86 ATHNYLSF--VENPDIEKCAIDCIDKNGVG-SCGPRGFYGTNVVHLDLENDIASFMGLE----ETALYSFGFSTSASAIA 158 (457)
Q Consensus 86 ~s~~~l~~--~~~p~i~~a~~~~l~~~~~~-~~~~~~~~g~~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~~ai~ 158 (457)
.++.+++. .+++.+.+++.+++.++... ...+....+..+...++++.+++++|.+ .++++++|++|+..++.
T Consensus 65 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~ 144 (497)
T 3mc6_A 65 KEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACL 144 (497)
T ss_dssp GGTCBSSSCSCCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHH
T ss_pred CCCCEeeecCCCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHH
Confidence 33444454 34578999999999885432 2223333455677778888999999876 56888899999999998
Q ss_pred hhcC-----CC---CEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEe
Q psy15447 159 AYVK-----RN---DAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVE 224 (457)
Q Consensus 159 a~~~-----~g---d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e 224 (457)
++++ +| |.|+++.+.|.++..++...|.+++.++.+ |+++|++.++ +++++|+++
T Consensus 145 a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-----------~~~~~v~~~ 213 (497)
T 3mc6_A 145 SAKMYALHHRGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPTTYQVDLGKVKKFIN-----------KNTVLLVGS 213 (497)
T ss_dssp HHHHHHHHHSCCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCTTTCSBCTTTTGGGCC-----------SSEEEEEEE
T ss_pred HHHHHHHhcCCCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCcccCcCCHHHHHHHHh-----------hCCEEEEEE
Confidence 8754 45 899999999999999999999998887753 4677777664 346899999
Q ss_pred cCCCCCCCCCChHHHHHHHHHcCcEEEEEcCccccccc---CCCCccccccCCCCCCccEEEecCcccc-cCc-ccEEEe
Q psy15447 225 GVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLG---STGHGVTEYFGVSTEEVDMIIGSLEHAL-GSV-GGFCVG 299 (457)
Q Consensus 225 ~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g---~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~-gG~v~~ 299 (457)
+++|++|.+.|+++|+++|++||++||+||+|+.+... ..|.+....+.....++|+++.|++|++ ++. .|+++.
T Consensus 214 ~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~ 293 (497)
T 3mc6_A 214 APNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMY 293 (497)
T ss_dssp TTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEEC
T ss_pred CCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEe
Confidence 99999999999999999999999999999999744321 1122211112222346799999999997 433 377777
Q ss_pred cHHHHHHHHhhC-Cc--------ceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEe
Q psy15447 300 SSYIIEHHRLSG-SG--------YCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQ 368 (457)
Q Consensus 300 ~~~~~~~~~~~~-~~--------~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~ 368 (457)
+++.+....... .. ..+.++.+....++..++++.+... .++.++..++++++.+.|++. ++|+++.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~--~~g~~~~ 371 (497)
T 3mc6_A 294 RNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQEN--IPDLDIM 371 (497)
T ss_dssp SSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--CTTCEEC
T ss_pred cCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEe
Confidence 765544331100 00 1111222333334444455544332 456788889999999999881 1588887
Q ss_pred ccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 369 GHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 369 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
.++...++.+..... ...++.+.|.++||.+..... ++.+|++++ .+|++|+++++++|++++
T Consensus 372 ~~~~~~~v~~~~~~~--------~~~~l~~~L~~~Gi~v~~~~~--------~~~~ri~~~-~~t~e~i~~~~~~L~~~l 434 (497)
T 3mc6_A 372 GNPRYSVISFSSKTL--------NIHELSDRLSKKGWHFNALQK--------PVALHMAFT-RLSAHVVDEICDILRTTV 434 (497)
T ss_dssp SCCCSSEEEEECTTT--------THHHHHHHHHTTTCBCEECCS--------SCCEEEECC-TTTTCTHHHHHHHHHHHH
T ss_pred cCCCeeEEEEeCCCC--------CHHHHHHHHHhCCEEEecCCC--------CCeEEEEEe-CCCHHHHHHHHHHHHHHH
Confidence 666677777765432 456899999999998876543 257899998 789999999999999999
Q ss_pred HHhcC
Q psy15447 449 DIAVQ 453 (457)
Q Consensus 449 ~~~~~ 453 (457)
+++..
T Consensus 435 ~~~~~ 439 (497)
T 3mc6_A 435 QELKS 439 (497)
T ss_dssp HHHTC
T ss_pred HHHHh
Confidence 88754
No 171
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.95 E-value=3e-27 Score=233.86 Aligned_cols=327 Identities=11% Similarity=0.050 Sum_probs=219.0
Q ss_pred CCeeeEEeecCCccCCC----CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc---C-----CCcEEE
Q psy15447 78 NGIPCINFATHNYLSFV----ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM---G-----LEETAL 145 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~----~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~---g-----~~~~i~ 145 (457)
.|++++||+++.|++.. .+|.+.+++.+++++.... + |+......++++.+++++ + .+.+++
T Consensus 24 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~----y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~ 97 (396)
T 2q7w_A 24 ERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTK--N----YLGIDGIPEFGRCTQELLFGKGSALINDKRART 97 (396)
T ss_dssp ----CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCC--C----CCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEE
T ss_pred CCCCceecccccccCCCCCccCcHHHHHHHHhhcCccccc--C----CCCCCCCHHHHHHHHHHHhcCCCCccccccEEE
Confidence 46789999998875542 3689999999888763111 1 122223456677777765 2 345666
Q ss_pred --ecccHHHHHHHHHhh--cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC---C----CHHHHHHHHHhhchhcccCC
Q psy15447 146 --YSFGFSTSASAIAAY--VKRNDAVFVDENINFAIQTGLIASRCKVQYFKH---N----NMQHLEELLRQQDERDTLNS 214 (457)
Q Consensus 146 --~~sG~~a~~~ai~a~--~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~---~----d~~~le~~l~~~~~~~~~~~ 214 (457)
+++|++|+..+++++ ..+||.|++..++|..+...++..|.++..++. + |++++++.+++..
T Consensus 98 ~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~------- 170 (396)
T 2q7w_A 98 AQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQ------- 170 (396)
T ss_dssp EEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCC-------
T ss_pred EecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCC-------
Confidence 888899999998766 369999999999999988889999999888876 3 7899999886521
Q ss_pred CCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccC--CCCccccccCCCCCCccEEEecCccc
Q psy15447 215 KVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGS--TGHGVTEYFGVSTEEVDMIIGSLEHA 289 (457)
Q Consensus 215 ~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~--~g~~~~~~~~~~~~~~Di~~~s~sK~ 289 (457)
.+++++++++++||+|.+.+ +++|+++|++||+++|+||+|+...++. .+..+ ..+...+ +.+++++|+||+
T Consensus 171 -~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~~-~~~i~~~s~sK~ 247 (396)
T 2q7w_A 171 -AGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGL-RAFAAMH-KELIVASSYSXN 247 (396)
T ss_dssp -TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHH-HHHHHHC-SCEEEEEECTTT
T ss_pred -CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHH-HHHHhcC-CcEEEEEecccc
Confidence 24678888999999999987 5689999999999999999997644431 11111 1111111 235889999999
Q ss_pred ccCcc---cEEEe---cH----HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH-------hhCcHHHHHHHHHHHHH
Q psy15447 290 LGSVG---GFCVG---SS----YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL-------KANPSLLTKLREKCNTM 352 (457)
Q Consensus 290 lg~~g---G~v~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~-------~~~~~~~~~l~~~~~~l 352 (457)
+|..| ||+++ ++ .+++.+.... ...++ +.+++.++++.++++.. +..++.+++++++.+++
T Consensus 248 ~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l 325 (396)
T 2q7w_A 248 FGLYNERVGACTLVAADSETVDRAFSQMKAAI-RANYS-NPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLF 325 (396)
T ss_dssp TTCGGGCCEEEEEECSSHHHHHHHHHHHHHHH-HTTTS-SCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHH
T ss_pred ccccccccceEEEEcCCHHHHHHHHHHHHHHH-hhccC-CCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 98666 88876 55 3444443211 11222 24777777777776432 12234567788889999
Q ss_pred HHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCC
Q psy15447 353 HSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISH 432 (457)
Q Consensus 353 ~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~ 432 (457)
.+.|++.....++.+..+..+.++++.+. ...+.+.|.++||++.+ .+||+++. .
T Consensus 326 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~gv~v~~-------------~~Ris~~~-~ 380 (396)
T 2q7w_A 326 VNTLQEKGANRDFSFIIKQNGMFSFSGLT-----------KEQVLRLREEFGVYAVA-------------SGRVNVAG-M 380 (396)
T ss_dssp HHHHHHTTCCSCCTHHHHCCSSEEECCCC-----------HHHHHHHHHHHCEECCT-------------TCEEEGGG-C
T ss_pred HHHHHhcCCCCCcceecCCCceEEEecCC-----------HHHHHHHHHhcCeeecC-------------CceEEEee-c
Confidence 99998721000254443444555554321 12455666788998764 36999985 4
Q ss_pred CHHHHHHHHHHHHHH
Q psy15447 433 TEQDMNSLIETLCKS 447 (457)
Q Consensus 433 t~edi~~~~~~l~~~ 447 (457)
|++++++++++|+++
T Consensus 381 ~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 381 TPDNMAPLCEAIVAV 395 (396)
T ss_dssp CTTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhc
Confidence 999999999999875
No 172
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.95 E-value=6.9e-27 Score=233.40 Aligned_cols=346 Identities=12% Similarity=0.014 Sum_probs=228.0
Q ss_pred eEEeecCCccC---CCCChhhHHHHHHHHH-hcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHH--
Q psy15447 82 CINFATHNYLS---FVENPDIEKCAIDCID-KNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTS-- 153 (457)
Q Consensus 82 ~id~~s~~~l~---~~~~p~i~~a~~~~l~-~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~-- 153 (457)
++||+.+.+ . +...+.+.+++.+++. ..+... ..|+...-..+|++.++++++.+ ++++++++++++
T Consensus 34 ~i~l~~g~~-~~~~~~~~~~~~~a~~~~~~~~~~~~~----~~Y~~~~G~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l 108 (422)
T 3d6k_A 34 SLDLTRGKP-SAEQLDLSNDLLSLPGGDFRTKDGVDC----RNYGGLLGIADIRELWAEALGLPADLVVAQDGSSLNIMF 108 (422)
T ss_dssp CEECCCCSC-CHHHHHTTGGGGGCSTTCCBCTTCCBT----TSSCCSSCCHHHHHHHHHHHTCCGGGEEECSSCHHHHHH
T ss_pred eEeCCCCCC-ChhhCCCcHHHHHHHHHHHhhccchhh----hCCCCCCCCHHHHHHHHHHhCCChhHEEEecchHHHHHH
Confidence 689988765 2 3334577777665421 111111 11222222477888999988854 455556666776
Q ss_pred HHHHHhhcCC------------CCEEEEeCcccHHHHHHHHhcCCeEEEecC----CCHHHHHHHHHhhchhcccCCCCc
Q psy15447 154 ASAIAAYVKR------------NDAVFVDENINFAIQTGLIASRCKVQYFKH----NNMQHLEELLRQQDERDTLNSKVT 217 (457)
Q Consensus 154 ~~ai~a~~~~------------gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~----~d~~~le~~l~~~~~~~~~~~~~~ 217 (457)
..++.++..+ +|.|++..++|..+...++..|.++..++. .|++++++.+++ .+
T Consensus 109 ~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~----------~~ 178 (422)
T 3d6k_A 109 DLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDEGPDMGVVRELVKD----------PQ 178 (422)
T ss_dssp HHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETTEECHHHHHHHHTS----------TT
T ss_pred HHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCCCCCHHHHHHHHhc----------CC
Confidence 5566766655 347999999999998888888998887765 378999888853 23
Q ss_pred cEEEE-EecCCCCCCCCCChH---HHHHHHH-HcCcEEEEEcCcccccccCCCCccccccC----CCCCCccEEEecCcc
Q psy15447 218 KKFII-VEGVYMNSADICPLK---DILSLRS-KYQARIFVDESVSFGTLGSTGHGVTEYFG----VSTEEVDMIIGSLEH 288 (457)
Q Consensus 218 ~~~vi-~e~v~~~~G~i~~l~---~i~~l~~-~~g~~li~DEa~~~g~~g~~g~~~~~~~~----~~~~~~Di~~~s~sK 288 (457)
+++|+ +++++||+|.+.|.+ +|.++|+ +||+++|+||+|+.+.++..+........ ....+.+++++||||
T Consensus 179 ~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 258 (422)
T 3d6k_A 179 VKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSK 258 (422)
T ss_dssp EEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTT
T ss_pred CeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhh
Confidence 46666 678999999999965 7788888 99999999999985334332321111100 111234699999999
Q ss_pred ccc--CcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH----hhCcHHHHHHHHHHHHHHHHhhcc-cc
Q psy15447 289 ALG--SVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL----KANPSLLTKLREKCNTMHSLLSQH-KV 361 (457)
Q Consensus 289 ~lg--~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~----~~~~~~~~~l~~~~~~l~~~L~~~-~~ 361 (457)
+.+ .+.||+++++++++.+......+ +.+.+++.++++.++++.. +...+.++.++++.+++.+.|++. ..
T Consensus 259 ~~~~GlriG~~~~~~~l~~~l~~~~~~~--~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~ 336 (422)
T 3d6k_A 259 ITHAGSGVSFFASSKENIEWYASHANVR--GIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSE 336 (422)
T ss_dssp TSCTTSSCEEEECCHHHHHHHHHHHHHH--CSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred hcCcccceEEEEeCHHHHHHHHHHHHhh--cCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 842 23499999999988886543222 2335777777777776431 112234566666777777777541 11
Q ss_pred cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecc-ccCccccCCCCCeEEEEecCCCCHHHHHHH
Q psy15447 362 TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCP-SHLDQEAKKQKPSIRITCNISHTEQDMNSL 440 (457)
Q Consensus 362 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~-~~~~~~~~~~~~~lRi~~~~~~t~edi~~~ 440 (457)
..++.+..+..+.++++.++.. ....+.+.|.++||.+++. .++........+++||+++. +++++++++
T Consensus 337 ~~~~~~~~p~~g~~~~~~~~~~--------~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~-~~~e~i~~~ 407 (422)
T 3d6k_A 337 YGVAKWTSPTGGYFISVDVVPG--------TASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSL-PPVAELEVA 407 (422)
T ss_dssp GTCEEECCCSBSSCEEEEESTT--------CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSS-SCHHHHHHH
T ss_pred CCceEEeCCCcceEEEEECCCC--------CHHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCC-CCHHHHHHH
Confidence 1236665555678888888653 1245778888999999883 32210000135799999987 899999999
Q ss_pred HHHHHHHHHHhcC
Q psy15447 441 IETLCKSHDIAVQ 453 (457)
Q Consensus 441 ~~~l~~~~~~~~~ 453 (457)
+++|+++++++..
T Consensus 408 ~~~l~~~l~~~~~ 420 (422)
T 3d6k_A 408 MDGFATCVLMAAL 420 (422)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999887643
No 173
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.95 E-value=1.7e-26 Score=227.25 Aligned_cols=296 Identities=14% Similarity=0.114 Sum_probs=210.7
Q ss_pred hHHHHHHHHHHHhhcCCCcEEE-ecccHHHHHHHHHhhcCCCCEEEEeCcccHH-HHHH-HHhcC--CeEEEec------
Q psy15447 124 NVVHLDLENDIASFMGLEETAL-YSFGFSTSASAIAAYVKRNDAVFVDENINFA-IQTG-LIASR--CKVQYFK------ 192 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~-~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~-~~~~-~~~~g--~~~~~~~------ 192 (457)
.+...++++++++++|.+..++ ++||++|+..++..+ .+||.|++..+.|.+ .+.. ....| .++..++
T Consensus 34 ~~~~~~~~~~l~~~~~~~~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~ 112 (379)
T 3ke3_A 34 QEVMNDLLSNLKTVYNAEAAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERTED 112 (379)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEESSC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEecccccc
Confidence 3566788899999999876554 568999999888654 688888776665544 3222 23334 3444433
Q ss_pred --------CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccc
Q psy15447 193 --------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTL 261 (457)
Q Consensus 193 --------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~ 261 (457)
..|++++++.+++. ++++|++.++.+++|.+.| +++|+++|++||+++|+|++++ |..
T Consensus 113 ~~~~~~~~~~d~~~l~~~i~~~----------~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~~ 181 (379)
T 3ke3_A 113 TEAPKPFAPVDIETAVAKIKED----------KSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GCV 181 (379)
T ss_dssp CSSCCCEECCCHHHHHHHHHHH----------TCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TTC
T ss_pred ccccCCCCCCCHHHHHHHHhhc----------CCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CCc
Confidence 36899999998642 3457888888889999999 9999999999999999999987 522
Q ss_pred cCCCCccccccCCCCCCccEEEecCcccccC-cc-cEEEecHHHHHHHHhhC-Ccc-------------------eecCC
Q psy15447 262 GSTGHGVTEYFGVSTEEVDMIIGSLEHALGS-VG-GFCVGSSYIIEHHRLSG-SGY-------------------CFSAS 319 (457)
Q Consensus 262 g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~-~g-G~v~~~~~~~~~~~~~~-~~~-------------------~~~~~ 319 (457)
. .....+ ++|+++.|++|++++ .| |++++++++++.+.... .++ .++++
T Consensus 182 ~----~~~~~~-----~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t 252 (379)
T 3ke3_A 182 W----LDMKEL-----GIDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHAT 252 (379)
T ss_dssp C----CCHHHH-----TCSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSC
T ss_pred c----cccccc-----CCCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCC
Confidence 1 111222 458999999999964 33 88999999888876421 111 12235
Q ss_pred CcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC--CCCeEEEEecCCcchHHHHHHHHH
Q psy15447 320 LPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR--DTPLKYLYLQKSDDEVASKKLLQT 395 (457)
Q Consensus 320 ~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~ 395 (457)
.++..++++.++++.+.+. +++.++.+++.+++++.|++ .|+++..+. .++++.....+.. . ..
T Consensus 253 ~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~----~g~~~~~~~~~~~~~i~~~~~~~~-------~-~~ 320 (379)
T 3ke3_A 253 MPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTD----KGIESVAAEGFEAPGVVVSYTERD-------D-MH 320 (379)
T ss_dssp CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCBSBCTTCBCSSEEEEECSCH-------H-HH
T ss_pred CCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH----cCCEecCCccccCceEEEEccCCc-------c-hH
Confidence 6788888888899887654 56788999999999999988 466665433 2454433322221 1 12
Q ss_pred HHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 396 ICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 396 ~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+.+.|.++||.+.++.+|....+...+++||+++..+|++||++++++|+++++++.
T Consensus 321 ~~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 321 KGSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp SSHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 367788999999887654332233367999999999999999999999999988765
No 174
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.95 E-value=1.3e-26 Score=231.35 Aligned_cols=332 Identities=9% Similarity=-0.002 Sum_probs=223.1
Q ss_pred CeeeEEeecCCccCCC----CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CC--cEEEecc
Q psy15447 79 GIPCINFATHNYLSFV----ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LE--ETALYSF 148 (457)
Q Consensus 79 G~~~id~~s~~~l~~~----~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~--~~i~~~s 148 (457)
+..+|||+.+.|+... ..|.+++++.+++++... ..+....|..++.+++++.+....+ .+ .++++++
T Consensus 48 ~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G 125 (420)
T 4f4e_A 48 RPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLP--RGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALG 125 (420)
T ss_dssp CSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCC--CCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEH
T ss_pred CCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCC--CCCCCCCCcHHHHHHHHHHhcCCCccccccCceEEEECCc
Confidence 3578999988544322 237899999999886221 1122234556666666666655443 34 5677788
Q ss_pred cHHHHHHHH--HhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC----C---CHHHHHHHHHhhchhcccCCCCccE
Q psy15447 149 GFSTSASAI--AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH----N---NMQHLEELLRQQDERDTLNSKVTKK 219 (457)
Q Consensus 149 G~~a~~~ai--~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~----~---d~~~le~~l~~~~~~~~~~~~~~~~ 219 (457)
|++|+..++ .+++++||.|+++.++|..+...++..|.++..++. + |++++++.+++.. ++++
T Consensus 126 ~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~--------~~~~ 197 (420)
T 4f4e_A 126 GTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYE--------PGTI 197 (420)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCC--------TTCE
T ss_pred cHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCC--------CCCE
Confidence 889999884 456899999999999999999999999999888876 3 7999999987532 4568
Q ss_pred EEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCC--CCccccccCCCCCCccEEEecCcccccCcc
Q psy15447 220 FIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGST--GHGVTEYFGVSTEEVDMIIGSLEHALGSVG 294 (457)
Q Consensus 220 ~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~--g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g 294 (457)
++++++++||+|.+.+ +++|+++|++||+++|+||+|+...++.. ...+....+. .+.+++++|+||.+|+.|
T Consensus 198 ~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~~~G 275 (420)
T 4f4e_A 198 VVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAA--NLNVFVSSSFSKSFSLYG 275 (420)
T ss_dssp EEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHT--TCCEEEEEECTTTTTCGG
T ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhc--CCCEEEEEeCCccCcCcC
Confidence 9999999999999987 66899999999999999999976555421 1111122122 233688999999998766
Q ss_pred ---cEEE---ecHHHHHHHHhhCC---cceecCCCcHHHHHHHHHHHHH-------HhhCcHHHHHHHHHHHHHHHHhhc
Q psy15447 295 ---GFCV---GSSYIIEHHRLSGS---GYCFSASLPPFLAVAANKALHL-------LKANPSLLTKLREKCNTMHSLLSQ 358 (457)
Q Consensus 295 ---G~v~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~aaa~a~l~~-------~~~~~~~~~~l~~~~~~l~~~L~~ 358 (457)
||++ .++++++.+..... ...++ +.+++.++++.+.++. .+..++++++++++.+++.+.|++
T Consensus 276 ~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 354 (420)
T 4f4e_A 276 ERVGALSIITDSKDEAARVLSQLKRVIRTNYS-NPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKA 354 (420)
T ss_dssp GCEEEEEEECSSHHHHHHHHHHHHHHHHTTTS-SCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEEcCCHHHHHHHHHHHHHHHhcccC-CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8864 35565544321110 01122 2344444444444432 111245778889999999999988
Q ss_pred ccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHH
Q psy15447 359 HKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMN 438 (457)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~ 438 (457)
+....++.+..+..+.+.++.+. ...+.+.+.++||++.+. .|++++ .+|+++++
T Consensus 355 ~~~~~~~~~~~~~~g~~~~~~~~-----------~~~~~~~l~~~gI~v~~~-------------~Ris~~-~~~~~~i~ 409 (420)
T 4f4e_A 355 AGIERDFSFINAQRGMFSYSGLT-----------SAQVDRLREEFGIYAVST-------------GRICVA-ALNTRNLD 409 (420)
T ss_dssp TTCSSCCTHHHHSCSSEEECCCC-----------HHHHHHHHHHHCEECCTT-------------SEEEGG-GCCTTTHH
T ss_pred cCCCCCceeECCCccEEEEeCCC-----------HHHHHHHHHhCCEEecCC-------------CeEEEe-cCCHHHHH
Confidence 32113555544455666554332 124566677889988652 388885 35788899
Q ss_pred HHHHHHHHHH
Q psy15447 439 SLIETLCKSH 448 (457)
Q Consensus 439 ~~~~~l~~~~ 448 (457)
+++++|++++
T Consensus 410 ~~~~~l~~~l 419 (420)
T 4f4e_A 410 VVANAIAAVL 419 (420)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998875
No 175
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.95 E-value=1.4e-25 Score=221.40 Aligned_cols=287 Identities=13% Similarity=0.150 Sum_probs=210.5
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~ 198 (457)
..+...++++++++++|.+.+++++||++|+..+++++.++||.|++..+.|+++... ++..|.++..++..|+++
T Consensus 57 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~ 136 (389)
T 3acz_A 57 GNPTVEQFEEMVCSIEGAAGSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTSDVEK 136 (389)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTCHHH
T ss_pred CChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCHHH
Confidence 3677899999999999999999999999999999999999999999999999887665 467899999999999999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.+++ ++++|++++++|++|.+.|+++|+++|++||+++|+||+|+.+..+. . .+ .+
T Consensus 137 l~~~i~~-----------~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~---~----~~---~~ 195 (389)
T 3acz_A 137 VKAAWKP-----------NTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLK---P----LE---LG 195 (389)
T ss_dssp HHHTCCT-----------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCC---G----GG---TT
T ss_pred HHHhcCC-----------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccC---c----cc---cC
Confidence 9887743 45799999999999999999999999999999999999998664321 1 11 23
Q ss_pred ccEEEecCcccccCc----ccEEEecH-HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGSV----GGFCVGSS-YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 279 ~Di~~~s~sK~lg~~----gG~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~ 353 (457)
+|+++.|++|++|+. ||++++++ ++++.++.... .++.+.+|..++++++.++.+. .++++..++...+.
T Consensus 196 ~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~--~~g~~~~~~~~~~~~~~l~~l~---~r~~~~~~~~~~l~ 270 (389)
T 3acz_A 196 ADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRK--DAGSLMAPMDAFLCARGMKTLP---IRMQIHMENGLKVA 270 (389)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHH--HHCCCCCHHHHHHHHHHHTTHH---HHHHHHHHHHHHHH
T ss_pred CeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHH--hcCCCCCHHHHHHHHcCccHHH---HHHHHHHHHHHHHH
Confidence 589999999999754 68999988 88887764331 2444568888888777775442 35566777777777
Q ss_pred HHhhccccc-----------CCeEEec---cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecc---------
Q psy15447 354 SLLSQHKVT-----------QRFLVQG---HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCP--------- 410 (457)
Q Consensus 354 ~~L~~~~~~-----------~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~--------- 410 (457)
+.|++...+ +++.+.. ...++++.+.+++ . .++.+.+.+.|+.+...
T Consensus 271 ~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~-~---------~~~~~~l~~~~i~~~~~s~G~~~sl~ 340 (389)
T 3acz_A 271 KFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS-F---------EAAKKLMEHLKVCTLAVSLGCVDTLI 340 (389)
T ss_dssp HHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS-H---------HHHHHHHTTCSSSEEBSCCCCSSCEE
T ss_pred HHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC-H---------HHHHHHHHhCCCcEECcCCCCcccEe
Confidence 777763111 1111111 1236788887754 2 13445566678887663
Q ss_pred ccCccc------------cCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447 411 SHLDQE------------AKKQKPSIRITCNISHTEQDMNSLIETLC 445 (457)
Q Consensus 411 ~~~~~~------------~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 445 (457)
.+|... ....++.+|++++...+++.++.+.++|+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~~~~~li~~l~~al~ 387 (389)
T 3acz_A 341 EHPASMTHAAVPENIMRKQGITPELVRISVGIENVDDIIADLKQALE 387 (389)
T ss_dssp ECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHT
T ss_pred eCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHh
Confidence 222210 01125799999988766666666655553
No 176
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.95 E-value=2.1e-26 Score=229.27 Aligned_cols=340 Identities=11% Similarity=0.092 Sum_probs=215.0
Q ss_pred CeeeEEeecCCccCCCCChh----hHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----C----CCcEEEe
Q psy15447 79 GIPCINFATHNYLSFVENPD----IEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----G----LEETALY 146 (457)
Q Consensus 79 G~~~id~~s~~~l~~~~~p~----i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g----~~~~i~~ 146 (457)
+..++||+.+.+-. .|. +.+++.+.+.+.... .....|+......+|++.+|+++ | .++++++
T Consensus 30 ~~~~i~l~~g~p~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t 104 (417)
T 3g7q_A 30 TPGAIMLGGGNPAH---IPAMQDYFQTLLTDMVESGKAA--DALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALT 104 (417)
T ss_dssp --CCEECSCCCCCC---CHHHHHHHHHHHHHHHHHTHHH--HHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEE
T ss_pred CCCceEecCcCCCC---CChHHHHHHHHHHHHhhCCccc--ceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEe
Confidence 35688998764422 344 444444444331100 00011222233456666666654 3 3577888
Q ss_pred cccHHHHHHHHHhhcCCCC-----EEEEe-CcccHHHHHHHHh------cCCeEEEecC------CCHHHHHHHHHhhch
Q psy15447 147 SFGFSTSASAIAAYVKRND-----AVFVD-ENINFAIQTGLIA------SRCKVQYFKH------NNMQHLEELLRQQDE 208 (457)
Q Consensus 147 ~sG~~a~~~ai~a~~~~gd-----~v~~~-~~~h~~~~~~~~~------~g~~~~~~~~------~d~~~le~~l~~~~~ 208 (457)
++|++|+..++++++++|| .|++. .+.|..+...... .+..+..++. .|+++++ + .
T Consensus 105 ~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~---~- 178 (417)
T 3g7q_A 105 NGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLH--I---G- 178 (417)
T ss_dssp SCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCC--C---C-
T ss_pred CCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcccccccCHHHhc--c---c-
Confidence 8899999999999999987 78885 7777766544321 1233444433 2677766 2 1
Q ss_pred hcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEec
Q psy15447 209 RDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGS 285 (457)
Q Consensus 209 ~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s 285 (457)
+++++|++++++||+|.+.| +++|+++|++||+++|+||+|+.+..+....+.. ....+.++++.|
T Consensus 179 -------~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~----~~~~~~~i~~~s 247 (417)
T 3g7q_A 179 -------EETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEAR----PLWNPNIILCMS 247 (417)
T ss_dssp -------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCC----CCCCTTEEEEEE
T ss_pred -------cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccc----cCCCCCEEEEEe
Confidence 35678889999999999999 8899999999999999999997532211111110 011245799999
Q ss_pred CcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh---hCc-HHHHHHHHHHHHHHHHhhc
Q psy15447 286 LEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK---ANP-SLLTKLREKCNTMHSLLSQ 358 (457)
Q Consensus 286 ~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~---~~~-~~~~~l~~~~~~l~~~L~~ 358 (457)
+|| ++++| ||+++++++++.+......+.++ .+++.++++.+.++... ... .++++++++.+.+.+.|++
T Consensus 248 ~sK-~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 324 (417)
T 3g7q_A 248 LSK-LGLPGSRCGIIIANDKTITAIANMNGIISLA--PGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRR 324 (417)
T ss_dssp SGG-GTCTTSCCEEEECCHHHHHHHHHHHHHHCCC--CCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred chh-ccCCCcceEEEEeCHHHHHHHHHhhcceeeC--CCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999 55444 99999999998887544333333 35666666655554211 111 1456677777777777765
Q ss_pred ccccCCeEEeccCCCCeEEEEecC-CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCC----CCCeEEEEecCCCC
Q psy15447 359 HKVTQRFLVQGHRDTPLKYLYLQK-SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKK----QKPSIRITCNISHT 433 (457)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~----~~~~lRi~~~~~~t 433 (457)
.....++.+..+..+.++++.++. .. ...++.+.|.++||.+.++..+...... ..+++||+++. |
T Consensus 325 ~l~~~~~~~~~~~~g~~~~~~~~~~~~-------~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~--~ 395 (417)
T 3g7q_A 325 YLSEERCLIHKPEGAIFLWLWFKDLPI-------TTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP--E 395 (417)
T ss_dssp HCCTTTCEEECCCBSSEEEEECTTCSS-------CHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS--C
T ss_pred hcccCCceeeCCCcceEEEEEcCCCCC-------CHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC--C
Confidence 210125666656668888888875 23 3457889999999999987654220000 14689999985 9
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q psy15447 434 EQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 434 ~edi~~~~~~l~~~~~~~~ 452 (457)
++++++++++|+++++++.
T Consensus 396 ~~~i~~~~~~l~~~l~~~~ 414 (417)
T 3g7q_A 396 PDKIEAGVKILAEEIERAW 414 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988764
No 177
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.95 E-value=1.6e-26 Score=235.36 Aligned_cols=345 Identities=15% Similarity=0.087 Sum_probs=238.6
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC-------cEEEecccH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE-------ETALYSFGF 150 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-------~~i~~~sG~ 150 (457)
+|+..+++++ +.....+|.+.+++.+.+......+. ...+..+...++.+.+++++|.+ ..+++++|+
T Consensus 53 ~gnp~~~l~s--~~t~~~~~~v~~~l~~~~~~~~~~~~---~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggt 127 (502)
T 3hbx_A 53 DGNPRLNLAS--FVTTWMEPECDKLIMSSINKNYVDMD---EYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSS 127 (502)
T ss_dssp SCCGGGBTTC--CSCCCCCHHHHHHHHHTTTCBTTCTT---TCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHH
T ss_pred CCCCCceecc--ccCCCCCHHHHHHHHHHhccCCCChh---cChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHH
Confidence 5666555544 22233578899988888765433221 11234566667888899999977 345688999
Q ss_pred HHHHHHHHhhcCC--------CC-----EEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcc
Q psy15447 151 STSASAIAAYVKR--------ND-----AVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDT 211 (457)
Q Consensus 151 ~a~~~ai~a~~~~--------gd-----~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~ 211 (457)
+|+..++.++..+ |+ .|+++...|.++..+++..|.+++.++.+ |++++++.+.+
T Consensus 128 ea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 201 (502)
T 3hbx_A 128 EAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDE------ 201 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCCT------
T ss_pred HHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCCCcCcCCHHHHHHHHhh------
Confidence 9999888877554 66 89999999999999999999998888743 78888887753
Q ss_pred cCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc------CcEEEEEcCcccccc---cCCCCccccccCCCCCCccEE
Q psy15447 212 LNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY------QARIFVDESVSFGTL---GSTGHGVTEYFGVSTEEVDMI 282 (457)
Q Consensus 212 ~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~------g~~li~DEa~~~g~~---g~~g~~~~~~~~~~~~~~Di~ 282 (457)
++++|+++.+++++|.+.|+++|.++|++| |+++++|++|+.+.. ..... +.+...++|++
T Consensus 202 -----~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~-----~~~~~~~~D~v 271 (502)
T 3hbx_A 202 -----NTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELE-----WDFRLPLVKSI 271 (502)
T ss_dssp -----TEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCC-----CSTTSTTEEEE
T ss_pred -----CCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccc-----cccCCCCceEE
Confidence 457888888999999999999999999999 999999999986542 22111 11222477999
Q ss_pred EecCcccccC-cc-cEE-EecHHHHHHHHhhCCcc--------eecCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHH
Q psy15447 283 IGSLEHALGS-VG-GFC-VGSSYIIEHHRLSGSGY--------CFSASLPPFLAVAANKALHLLKA--NPSLLTKLREKC 349 (457)
Q Consensus 283 ~~s~sK~lg~-~g-G~v-~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~ 349 (457)
..+.+|.+++ .| |++ +.++..+.........| .+..+.+...+++..++++.+.. ..+++++..+++
T Consensus 272 ~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a 351 (502)
T 3hbx_A 272 NVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENM 351 (502)
T ss_dssp EEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999843 22 544 44444331111000011 11122222233333344444322 245778888999
Q ss_pred HHHHHHhhcccccCCeEEecc-CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe
Q psy15447 350 NTMHSLLSQHKVTQRFLVQGH-RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC 428 (457)
Q Consensus 350 ~~l~~~L~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~ 428 (457)
++|.+.|++ .+++++..+ +..+++.+.+...... ...++.+.|.++|+++.....|.. ..+..++|+++
T Consensus 352 ~~l~~~L~~---~~~~~~~~~~~~~~~v~f~~~~~~~~-----~~~~l~~~L~~~Gi~v~~~~~p~~--~~~~~~lRisv 421 (502)
T 3hbx_A 352 IVLREGLEK---TERFNIVSKDEGVPLVAFSLKDSSCH-----TEFEISDMLRRYGWIVPAYTMPPN--AQHITVLRVVI 421 (502)
T ss_dssp HHHHHHHHT---TTCEEECSCSSSSSEEEEEESSCSSC-----CHHHHHHHHHTTTCBCCEEECCTT--CTTCEEEEEEC
T ss_pred HHHHHHHHh---CCCEEEEeCCCCceEEEEEecCCCcC-----CHHHHHHHHHhCCcEEeeccCCcc--cCCceEEEEEe
Confidence 999999998 456888755 5788888888653210 345789999999999865444322 22346899999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 429 NISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 429 ~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
...+|++|++++++.|+++++.+.+
T Consensus 422 ~~~~t~edid~li~~L~~~l~~l~~ 446 (502)
T 3hbx_A 422 REDFSRTLAERLVIDIEKVMRELDE 446 (502)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999987754
No 178
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.95 E-value=8.9e-27 Score=231.58 Aligned_cols=324 Identities=10% Similarity=0.040 Sum_probs=218.8
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc-CCC-------cE--EEeccc
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM-GLE-------ET--ALYSFG 149 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~-------~~--i~~~sG 149 (457)
..+|||+.++|+++.++|.+.+++.++... ...++ +......+|++.+++++ |.+ .+ ..+.+|
T Consensus 41 ~~~i~l~~g~~~d~~~~~~v~~a~~~a~~~---~~~~y----~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g 113 (409)
T 4eu1_A 41 KRKVNLSIGVYRDDADQPFVLECVKQATLG---TNMDY----APVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGG 113 (409)
T ss_dssp SSCEECCCSSCCCTTSCCCCCHHHHTCCCC---SCCCC----CCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHH
T ss_pred cCceeeeeeEEECCCCCEeecHHHHhcCcc---ccccC----CCCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccc
Confidence 568999999998888888899988877221 11111 12222356777777754 532 33 346777
Q ss_pred HHHHHHH---HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccE
Q psy15447 150 FSTSASA---IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKK 219 (457)
Q Consensus 150 ~~a~~~a---i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~ 219 (457)
++++..+ +.+++++||.|+++.++|..+...++..|.++..++. .|++++++.+++.. ++++
T Consensus 114 ~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--------~~~~ 185 (409)
T 4eu1_A 114 TGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAP--------EGSV 185 (409)
T ss_dssp HHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSC--------TTCE
T ss_pred hHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCC--------CCcE
Confidence 7777654 4567789999999999999999999999999988875 27899999987532 3457
Q ss_pred EEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccC---CCCccccccCCCCCCccEEEecCcccccCc
Q psy15447 220 FIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGS---TGHGVTEYFGVSTEEVDMIIGSLEHALGSV 293 (457)
Q Consensus 220 ~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~---~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~ 293 (457)
++++++++||+|.+.+ +++|.++|++||+++|+||+|+.+.++. .+.+.....+..+ ..++++|+||++|.+
T Consensus 186 ~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~S~SK~~g~~ 263 (409)
T 4eu1_A 186 ILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVP--NLIVAQSFSKNFGLY 263 (409)
T ss_dssp EEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSS--CCEEEEECTTTSSCG
T ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCC--cEEEEecCcccccCc
Confidence 7888889999999998 5569999999999999999987655442 1122222223322 248899999999876
Q ss_pred c---cEE---EecHH----HHHHHHhhCCcceecCCCcHHHHHHHHHHHHH-------HhhCcHHHHHHHHHHHHHHHHh
Q psy15447 294 G---GFC---VGSSY----IIEHHRLSGSGYCFSASLPPFLAVAANKALHL-------LKANPSLLTKLREKCNTMHSLL 356 (457)
Q Consensus 294 g---G~v---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~-------~~~~~~~~~~l~~~~~~l~~~L 356 (457)
| ||+ +++++ +++.++...... ..+.+++.++++.++++. .+..++.+++++++.+++.+.|
T Consensus 264 G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 341 (409)
T 4eu1_A 264 GHRCGALHISTASAEEAKRLVSQLALLIRPM--YNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSEL 341 (409)
T ss_dssp GGCCEEEEEECSSHHHHHHHHHHHHHHHHHH--HSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEEEeCCHHHHHHHHHHHHHHHhhh--cCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 884 67777 555554322111 223466776667666652 2223457788999999999999
Q ss_pred hcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447 357 SQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQ 435 (457)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e 435 (457)
++...-.++.+..+..+.+.++.+ +. +++..++ ++||++.+. .||+++. ++++
T Consensus 342 ~~~g~~~~~~~~~~~~~~~~~~~~--~~----------~~~~~ll~~~gv~v~p~-------------~Ri~~~~-~~~~ 395 (409)
T 4eu1_A 342 KACGSVHDWSHIERQVGMMAYTGL--TR----------EQVELLRSEYHIYMTLN-------------GRAAVSG-LNST 395 (409)
T ss_dssp HHTTCCSCCHHHHHSCSSEEECCC--CH----------HHHHHHHHHHCEECCTT-------------CEEEGGG-CCTT
T ss_pred HhcCCCCCcceecCCceEEEEeCC--CH----------HHHHHHHHcCCEEEcCC-------------CEEEEEe-cCHh
Confidence 882100014444344454444322 21 3455555 569988642 4788754 6778
Q ss_pred HHHHHHHHHHHHH
Q psy15447 436 DMNSLIETLCKSH 448 (457)
Q Consensus 436 di~~~~~~l~~~~ 448 (457)
|+++++++|++++
T Consensus 396 ~i~~~~~~l~~~l 408 (409)
T 4eu1_A 396 NVEYVSQAIHNVT 408 (409)
T ss_dssp THHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHh
Confidence 8999999998875
No 179
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.95 E-value=2.1e-26 Score=232.92 Aligned_cols=346 Identities=14% Similarity=0.091 Sum_probs=223.0
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAI 157 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai 157 (457)
.|++||||.++.+. |++.+++.+++.. +. ..|+..+...+|++++++++|.+.+++++||++|+..++
T Consensus 39 ~~~~ylD~~~~~~~-----~~v~~a~~~~l~~-~~------~~y~~~~~~~~l~~~la~~~~~~~v~~t~~gt~A~~~al 106 (467)
T 2oqx_A 39 SEDVFIDLLTDSGT-----GAVTQSMQAAMMR-GD------EAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYI 106 (467)
T ss_dssp GGGCSEECSCCSSC-----SCCCHHHHHHTTS-CC------CCSSSCHHHHHHHHHHHHHHCCSEEEEEC--CCSHHHHH
T ss_pred CCCeeEecccCCCc-----HHHHHHHHHHhcc-Cc------ceeccCchhHHHHHHHHHHhCcCcEEEcCCcHHHHHHHH
Confidence 47889999775432 8899999888753 11 124456677899999999999999999999999999999
Q ss_pred HhhcCC-----C----CEEEEeCcccHHHH-HHHHhcCCeEEEe--------------cC-CCHHHHHHHHHhhchhccc
Q psy15447 158 AAYVKR-----N----DAVFVDENINFAIQ-TGLIASRCKVQYF--------------KH-NNMQHLEELLRQQDERDTL 212 (457)
Q Consensus 158 ~a~~~~-----g----d~v~~~~~~h~~~~-~~~~~~g~~~~~~--------------~~-~d~~~le~~l~~~~~~~~~ 212 (457)
++++++ | |.|+.. .+|+... ......+..+... .. .|+++|++.+++..
T Consensus 107 ~~~~~~~~~~~G~~~~d~Ii~~-~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~----- 180 (467)
T 2oqx_A 107 PVLIKKREQEKGLDRSKMVAFS-NYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVG----- 180 (467)
T ss_dssp HHHHHHHHHHHCCCTTTCEEEE-SSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHC-----
T ss_pred HHHhccccccCCCCccceEEec-ccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcC-----
Confidence 998877 7 877776 5675433 3333444443321 11 28999999997532
Q ss_pred CCCCccEEEEEecCCCCC-CCCCC---hHHHHHHHHHcCcEEEEEcCccc-ccc-------cCCCCccccccCCC-CCCc
Q psy15447 213 NSKVTKKFIIVEGVYMNS-ADICP---LKDILSLRSKYQARIFVDESVSF-GTL-------GSTGHGVTEYFGVS-TEEV 279 (457)
Q Consensus 213 ~~~~~~~~vi~e~v~~~~-G~i~~---l~~i~~l~~~~g~~li~DEa~~~-g~~-------g~~g~~~~~~~~~~-~~~~ 279 (457)
.+++++|++++++|++ |.+.+ +++|+++|++||++||+|++|++ +.+ +..|..... ++.. ...+
T Consensus 181 --~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~-~~~~~~~~~ 257 (467)
T 2oqx_A 181 --PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQ-ITRETYKYA 257 (467)
T ss_dssp --GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHH-HHHHHGGGC
T ss_pred --CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHH-HhhhhhccC
Confidence 0256789999999986 77766 78999999999999999988876 433 222221111 1100 0123
Q ss_pred cEEEecCcccccCc-ccEEEecHH-HHHH---HHhh---CCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q psy15447 280 DMIIGSLEHALGSV-GGFCVGSSY-IIEH---HRLS---GSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNT 351 (457)
Q Consensus 280 Di~~~s~sK~lg~~-gG~v~~~~~-~~~~---~~~~---~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~ 351 (457)
|+++.|+||++|++ ||+++++++ +++. ++.. ..+....+..+...+++....++... .++..++.+++.++
T Consensus 258 d~~~~s~sK~~g~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~-~~~~~~~~~~~~~~ 336 (467)
T 2oqx_A 258 DMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGM-NLDWLAYRIAQVQY 336 (467)
T ss_dssp SEEEEESSSTTCCSSCEEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHH
T ss_pred CeEEEecccccCCCCceEEEecChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhh-hHHHHHHHHHHHHH
Confidence 67788999999876 788888765 4333 3221 11111111223222222112222111 12355667788999
Q ss_pred HHHHhhcccccCCeEEeccCCCCeEEEEecC---CcchHHHHHHHHHHHHHH-HHcCeeEeccccCcc--------ccCC
Q psy15447 352 MHSLLSQHKVTQRFLVQGHRDTPLKYLYLQK---SDDEVASKKLLQTICDMC-IQAGFAITCPSHLDQ--------EAKK 419 (457)
Q Consensus 352 l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~~~~~--------~~~~ 419 (457)
+.+.|++ .++++. +..+.++++.+.. ..+.. .....++++.| .++||.+.+...+.. ....
T Consensus 337 l~~~L~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~ 409 (467)
T 2oqx_A 337 LVDGLEE----IGVVCQ-QAGGHAAFVDAGKLLPHIPAD--QFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPC 409 (467)
T ss_dssp HHHHHHH----TTCCEE-EECSSCEEEEHHHHSTTSCGG--GCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCC
T ss_pred HHHHHHH----CCCeee-cCCceEEEEechhhcccCCcc--cccHHHHHHHHHHhcCceecccccccccccccccccccC
Confidence 9999988 266665 5567778887642 11100 00145678888 888999987432100 0011
Q ss_pred CCCeEEEEecCC-CCHHHHHHHHHHHHHHHHHhc
Q psy15447 420 QKPSIRITCNIS-HTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 420 ~~~~lRi~~~~~-~t~edi~~~~~~l~~~~~~~~ 452 (457)
..+++|++++.. +|++|+++++++|+++++...
T Consensus 410 ~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 410 PAELLRLTIPRATYTQTHMDFIIEAFKHVKENAA 443 (467)
T ss_dssp SCCEEEECCCTTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred ccCeEEEEecCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 237999999998 999999999999999987654
No 180
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.95 E-value=3.9e-26 Score=226.47 Aligned_cols=289 Identities=16% Similarity=0.173 Sum_probs=215.9
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~ 198 (457)
..+...++++++|+++|.+.+++++||++|+..++.+++++||.|++..+.|.++...+ ...|.++..++.+|+++
T Consensus 80 ~~p~~~~le~~lA~l~g~~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~ 159 (415)
T 2fq6_A 80 GTLTHFSLQQAMCELEGGAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGAD 159 (415)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGG
T ss_pred CCchHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCCCHHH
Confidence 46788999999999999998999999999999999999999999999999998877554 34588999999999999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHH--cCcEEEEEcCcccccccCCCCccccccCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSK--YQARIFVDESVSFGTLGSTGHGVTEYFGVST 276 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~--~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~ 276 (457)
+++++++ ++++|++|+++|++|.+.|+++|.++|++ ||+++|+|++|+.+... ..+ .
T Consensus 160 le~ai~~-----------~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~---~p~----~--- 218 (415)
T 2fq6_A 160 IVKHLQP-----------NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLF---KAL----D--- 218 (415)
T ss_dssp GGGGCCT-----------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSS---CGG----G---
T ss_pred HHHhhcc-----------CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccC---Ccc----c---
Confidence 8887743 46899999999999999999999999999 99999999999865322 111 1
Q ss_pred CCccEEEecCcccccCc----ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHH
Q psy15447 277 EEVDMIIGSLEHALGSV----GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTM 352 (457)
Q Consensus 277 ~~~Di~~~s~sK~lg~~----gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l 352 (457)
.++|+++.|++|.+|+. ||++++++++++.++... ..+++.++|..++.++.+++.+. .++++..++...+
T Consensus 219 ~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~--~~~G~~~~~~~a~~~~~~l~~l~---~r~~~~~~n~~~l 293 (415)
T 2fq6_A 219 FGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENA--YLMGQMVDADTAYITSRGLRTLG---VRLRQHHESSLKV 293 (415)
T ss_dssp GTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHH--HHTTCCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
T ss_pred cCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHH--HhcCCCCCHHHHHHHHhhhhHHH---HHHHHHHHHHHHH
Confidence 24589999999999753 589999888877775432 12344567877776766666553 3667778888889
Q ss_pred HHHhhcccccCCeEE---ec--------------cCCCCeEEEEecCC--cchHHHHHHHHHHHHHHHHcCeeEeccccC
Q psy15447 353 HSLLSQHKVTQRFLV---QG--------------HRDTPLKYLYLQKS--DDEVASKKLLQTICDMCIQAGFAITCPSHL 413 (457)
Q Consensus 353 ~~~L~~~~~~~~~~~---~~--------------~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~ 413 (457)
.+.|++. +.+.- .+ ...+.++++.+++. . ....++.+.|.-.++.++.+..+
T Consensus 294 ~~~L~~~---~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~------~~~~~~l~~l~~~~~a~s~G~~~ 364 (415)
T 2fq6_A 294 AEWLAEH---PQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNN------EELANYLDNFSLFSMAYSWGGYE 364 (415)
T ss_dssp HHHHHTC---TTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCH------HHHHHHHTTCSSCEECSCCCSSS
T ss_pred HHHHHcC---CCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCH------HHHHHHHHhCCcCeEeccCCCCc
Confidence 8888873 33321 11 12467889988763 1 14455665554345555433221
Q ss_pred c--------c--------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 414 D--------Q--------EAKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 414 ~--------~--------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
+ . .....++.+|+++....++++++.+.++|++
T Consensus 365 s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 365 SLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp CEEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred eeEEecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 1 0 0112257899999999999999999998874
No 181
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.95 E-value=1e-26 Score=231.29 Aligned_cols=331 Identities=8% Similarity=-0.011 Sum_probs=221.1
Q ss_pred CCeeeEEeecCCccCCC----CChhhHHHHHH-HHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc-C-------CCcEE
Q psy15447 78 NGIPCINFATHNYLSFV----ENPDIEKCAID-CIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM-G-------LEETA 144 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~----~~p~i~~a~~~-~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g-------~~~~i 144 (457)
+|++++||+++.|+++. ..|.+.+++.+ +++.... .+ |+......++++.+++++ + .+.++
T Consensus 27 ~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~--~~----y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~ 100 (412)
T 1yaa_A 27 QRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYN--HE----YLGITGLPSLTSNAAKIIFGTQSDALQEDRVI 100 (412)
T ss_dssp CCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCC--CC----CCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEE
T ss_pred CCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccc--cC----CCCCCCcHHHHHHHHHHHhcCCCCCCCcceEE
Confidence 35778999998886664 34778888887 7652111 11 112222355666666655 2 45677
Q ss_pred E--ecccHHHHHHHH--HhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccC
Q psy15447 145 L--YSFGFSTSASAI--AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLN 213 (457)
Q Consensus 145 ~--~~sG~~a~~~ai--~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~ 213 (457)
+ +++|++|+..++ .....+||.|++..++|..+...++..|.++..++. .|++++++.+++..
T Consensus 101 ~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~------ 174 (412)
T 1yaa_A 101 SVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAP------ 174 (412)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSC------
T ss_pred EEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhCC------
Confidence 7 888899998874 344568999999999999888888888998887776 27899999887521
Q ss_pred CCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccC---CCCccccccCCCCCC--ccEEEec
Q psy15447 214 SKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGS---TGHGVTEYFGVSTEE--VDMIIGS 285 (457)
Q Consensus 214 ~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~---~g~~~~~~~~~~~~~--~Di~~~s 285 (457)
..++++++++++||+|.+.+ +++|.++|++||+++|+||+|+...++. .+..+....... ++ .+++++|
T Consensus 175 --~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s 251 (412)
T 1yaa_A 175 --EGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKL-STVSPVFVCQS 251 (412)
T ss_dssp --TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHT-TTTCCEEEEEE
T ss_pred --CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcC-CCCcceEEEec
Confidence 23466777999999999987 5688999999999999999996543331 111121211111 11 3688999
Q ss_pred CcccccCcc---cEEE--e-----cHH----HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh-------hCcHHHHH
Q psy15447 286 LEHALGSVG---GFCV--G-----SSY----IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK-------ANPSLLTK 344 (457)
Q Consensus 286 ~sK~lg~~g---G~v~--~-----~~~----~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~-------~~~~~~~~ 344 (457)
+||++|+.| ||++ + +++ +++.+..... ..+ .+.+++.++++.++++... ..++.+++
T Consensus 252 ~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 329 (412)
T 1yaa_A 252 FAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIR-SEV-SNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSR 329 (412)
T ss_dssp CTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHH-TTT-SSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHh-hcc-CCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 999998766 8887 7 666 6666654211 112 2336777777777775431 23457788
Q ss_pred HHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeE
Q psy15447 345 LREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSI 424 (457)
Q Consensus 345 l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~l 424 (457)
++++.+++.+.|+++....++.+..+..+.+.++.+ + ...+.+.+.++||.+.+ .+
T Consensus 330 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~l~~~gi~v~~-------------~~ 385 (412)
T 1yaa_A 330 ITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGL--T---------PQMVKRLEETHAVYLVA-------------SG 385 (412)
T ss_dssp HHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCC--C---------HHHHHHHHHHHCEECCT-------------TS
T ss_pred HHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCC--C---------HHHHHHHHHhCCEEecc-------------Cc
Confidence 888999999999872100025554344444444322 1 12454445578998763 47
Q ss_pred EEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 425 RITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 425 Ri~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
||+++. +|++++++++++|+++++.
T Consensus 386 Ris~~~-~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 386 RASIAG-LNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp EEEGGG-CCTTTHHHHHHHHHHHHHH
T ss_pred EEEEcc-CCHhHHHHHHHHHHHHHHh
Confidence 999974 6999999999999998864
No 182
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.95 E-value=2.3e-25 Score=222.42 Aligned_cols=323 Identities=10% Similarity=0.076 Sum_probs=229.0
Q ss_pred EeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccC-hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcC
Q psy15447 84 NFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGT-NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVK 162 (457)
Q Consensus 84 d~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~-~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~ 162 (457)
||..+.+ .+...+++.+++.+.++. +. |+. .+...++++.+++++|.+.++++++|++|+..++.++.
T Consensus 20 ~l~~~~p-~~~~p~~~~~a~~~~~~~-~~--------y~~~~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~l~~l~- 88 (424)
T 2po3_A 20 PLLVGRP-NRIDRARLYERLDRALDS-QW--------LSNGGPLVREFEERVAGLAGVRHAVATCNATAGLQLLAHAAG- 88 (424)
T ss_dssp CEETTCC-CCCCHHHHHHHHHHHHHH-TC--------CSSSCHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHHT-
T ss_pred cccccCC-CCCChHHHHHHHHHHHhc-CC--------cccCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcC-
Confidence 4554432 344457899999888875 21 223 46788999999999999999999999999999999885
Q ss_pred CCCEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCCh
Q psy15447 163 RNDAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPL 236 (457)
Q Consensus 163 ~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l 236 (457)
+||.|++..+.|.++...+...|.+++.++.+ |++++++.+++ ++++|++.+ ++|...++
T Consensus 89 ~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-----------~~~~v~~~~---~tG~~~~l 154 (424)
T 2po3_A 89 LTGEVIMPSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTP-----------RTSAVVGVH---LWGRPCAA 154 (424)
T ss_dssp CCSEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCCT-----------TEEEEEEEC---GGGCCCCH
T ss_pred CCCEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhCc-----------CCcEEEEEC---CCCCcCCH
Confidence 78999999999999999999999998888754 67777766532 346666643 67889999
Q ss_pred HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCc--cccc-CcccEEEec-HHHHHHHHhhCC
Q psy15447 237 KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE--HALG-SVGGFCVGS-SYIIEHHRLSGS 312 (457)
Q Consensus 237 ~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s--K~lg-~~gG~v~~~-~~~~~~~~~~~~ 312 (457)
++|.++|++||+++|+||+|++|.. ..+.. .+. ..|+++.||+ |+++ +.+|+++++ +++++.++....
T Consensus 155 ~~i~~la~~~~~~li~Dea~~~g~~-~~~~~----~~~---~~di~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~ 226 (424)
T 2po3_A 155 DQLRKVADEHGLRLYFDAAHALGCA-VDGRP----AGS---LGDAEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHN 226 (424)
T ss_dssp HHHHHHHHHTTCEEEEECTTCTTCE-ETTEE----TTS---SSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHHB
T ss_pred HHHHHHHHHcCCEEEEECccccCCe-ECCee----ccc---ccCEEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHHh
Confidence 9999999999999999999986543 22221 111 1268899998 8885 456899998 788777653211
Q ss_pred -c----ce-----ecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-C----CCeEE
Q psy15447 313 -G----YC-----FSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR-D----TPLKY 377 (457)
Q Consensus 313 -~----~~-----~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~-~----~~~~~ 377 (457)
+ +. ....++++.+++++..++.++ +..++.+++.+++.+.|++ ++++.+...+ . ..++.
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~aa~~l~~~~~~~---~~~~~~~~~~~~l~~~L~~---~~g~~~~~~~~~~~~~~~~~~ 300 (424)
T 2po3_A 227 FGFDLPGGSPAGGTNAKMSEAAAAMGLTSLDAFP---EVIDRNRRNHAAYREHLAD---LPGVLVADHDRHGLNNHQYVI 300 (424)
T ss_dssp TTTTCTTCCTTCCCBCCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHTCS---CTTEEECCGGGGSCCCCCCEE
T ss_pred cCccccccccccCcCCCcCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcc---CCCccccCCCCCCccccEEEE
Confidence 1 10 112356777777776665543 3677888889999999987 4578775422 1 14555
Q ss_pred EEecC---CcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc-CC--------C-------CCeEEEEecCCCCHHHHH
Q psy15447 378 LYLQK---SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA-KK--------Q-------KPSIRITCNISHTEQDMN 438 (457)
Q Consensus 378 i~~~~---~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~-~~--------~-------~~~lRi~~~~~~t~edi~ 438 (457)
+.++. .. ...++.+.|.++||.+++...+.... +. . ...+|++++..+|++|++
T Consensus 301 i~~~~~~~~~-------~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~ 373 (424)
T 2po3_A 301 VEIDEATTGI-------HRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIR 373 (424)
T ss_dssp EEECHHHHSS-------CHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHH
T ss_pred EEECCccchh-------hHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHH
Confidence 66542 11 24578889999999998732211000 00 0 112777777999999999
Q ss_pred HHHHHHHHHHHHhc
Q psy15447 439 SLIETLCKSHDIAV 452 (457)
Q Consensus 439 ~~~~~l~~~~~~~~ 452 (457)
+++++|+++++...
T Consensus 374 ~~~~~L~~~~~~~~ 387 (424)
T 2po3_A 374 RVADLLRLCATRGR 387 (424)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhH
Confidence 99999999886653
No 183
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.95 E-value=5.5e-26 Score=224.50 Aligned_cols=309 Identities=16% Similarity=0.166 Sum_probs=224.2
Q ss_pred ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCccc
Q psy15447 96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENIN 174 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h 174 (457)
.+++.+++.+.+...... +..+...++++.+++++|.+.++++++|++|+..++.++ .++||.|++..+.|
T Consensus 35 ~~~~~~a~~~~~~~~~~~--------~~~~~~~~l~~~la~~~~~~~~i~~~~gt~al~~~l~~~~~~~gd~vl~~~~~~ 106 (391)
T 3dr4_A 35 DGNERDYVLECMDTTWIS--------SVGRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVPSLTY 106 (391)
T ss_dssp CSSHHHHHHHHHHHTCCS--------SCSHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHTCCTTCEEEEESSSC
T ss_pred CHHHHHHHHHHHHcCCcc--------CCChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCch
Confidence 378889998888752110 245778999999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCc
Q psy15447 175 FAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQA 248 (457)
Q Consensus 175 ~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~ 248 (457)
.++...+...|.++..++.+ |++++++.+++ ++++|++ .|++|.+.|+++|+++|++||+
T Consensus 107 ~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~-----------~~~~v~~---~n~tG~~~~~~~i~~l~~~~~~ 172 (391)
T 3dr4_A 107 IASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITP-----------RTKAIMP---VHLYGQICDMDPILEVARRHNL 172 (391)
T ss_dssp THHHHHHHHTTCEEEEECBCTTTCSBCGGGSGGGCCT-----------TEEEECC---BCGGGCCCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHCCCEEEEEecCccccCcCHHHHHHhcCC-----------CceEEEE---ECCCCChhhHHHHHHHHHHcCC
Confidence 99999999999999888755 67777766642 4456663 4688999999999999999999
Q ss_pred EEEEEcCcccccccCCCCccccccCCCCCCccEEEecCc--cccc-CcccEEEec-HHHHHHHHhhC-Cc------c---
Q psy15447 249 RIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE--HALG-SVGGFCVGS-SYIIEHHRLSG-SG------Y--- 314 (457)
Q Consensus 249 ~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s--K~lg-~~gG~v~~~-~~~~~~~~~~~-~~------~--- 314 (457)
++|+||+|+.|.... +. ..+.-+ |+.+.||+ |+++ +.||+++.+ +.+.+.++... .+ +
T Consensus 173 ~li~D~a~~~g~~~~-~~----~~~~~~---di~~~S~s~~K~l~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 244 (391)
T 3dr4_A 173 LVIEDAAEAVGATYR-GK----KSGSLG---DCATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFP 244 (391)
T ss_dssp EEEEECTTCTTCEET-TE----ETTSSS---SEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCS
T ss_pred EEEEECcccccceEC-Ce----eecccC---CEEEEECCCCCcCCcCCeEEEEECCHHHHHHHHHHHhcCCCCCCccccc
Confidence 999999998765321 11 122112 57777766 9996 456777665 55665554221 11 0
Q ss_pred --eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-------CCCCeEEEEecC--C
Q psy15447 315 --CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-------RDTPLKYLYLQK--S 383 (457)
Q Consensus 315 --~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-------~~~~~~~i~~~~--~ 383 (457)
.+...++++.+++++..++.++ +..++.+++.+++++.|++ . ++.+... ....++++.+.. .
T Consensus 245 ~~g~~~~~~~l~aa~~~~~~~~~~---~~~~~~~~~~~~l~~~L~~---~-g~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 317 (391)
T 3dr4_A 245 IVGFNYRMTNIQAAIGLAQLERVD---EHLAARERVVGWYEQKLAR---L-GNRVTKPHVALTGRHVFWMYTVRLGEGLS 317 (391)
T ss_dssp SCCCBCBCCHHHHHHHHHHHHTHH---HHHHHHHHHHHHHHHHHGG---G-TTSEECCCCCTTSCCCCSSEEEEECSSCS
T ss_pred ccccccCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhhc---C-CccccCcCCCCCCcceeEEEEEEECCccc
Confidence 1123457777777766655443 4678888999999999988 3 5554433 123356777665 2
Q ss_pred cchHHHHHHHHHHHHHHHHcCeeEeccccCccccC---------------CCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 384 DDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAK---------------KQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 384 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~---------------~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
. ...++.+.|.++||.++++..|....+ .....+|++++..+|++||++++++|++++
T Consensus 318 ~-------~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 318 T-------TRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp S-------CHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred h-------hHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 2 356799999999999987653321000 013579999999999999999999998653
No 184
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.95 E-value=3.4e-25 Score=220.34 Aligned_cols=285 Identities=15% Similarity=0.140 Sum_probs=209.8
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~ 198 (457)
..+...++++++++++|.+.+++++||++|+..++.++.++||.|++..+.|.++...+ ...|.++..++. |+++
T Consensus 54 ~~~~~~~l~~~la~~~g~~~~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~ 132 (412)
T 2cb1_A 54 KDPTAKALEERLKALEGALEAVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDP-EPEA 132 (412)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECS-SHHH
T ss_pred CChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-CHHH
Confidence 35778999999999999999999999999999999999999999999999998876654 346888888876 4888
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.++ +++++|++++++|++|.+.|+++|+++|++||+++|+||+|+.+.+. ... .+ .+
T Consensus 133 l~~~i~-----------~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~--~~~----~~---~~ 192 (412)
T 2cb1_A 133 VREALS-----------AKTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGAL--CRP----LA---WG 192 (412)
T ss_dssp HHHHCC-----------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTS--CCG----GG---GT
T ss_pred HHHHhc-----------cCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccc--CCc----cc---cC
Confidence 887774 25678999999999999999999999999999999999999865111 111 11 23
Q ss_pred ccEEEecCcccccCc----ccEEEecH---------------------------HHHHHHHhhCCcceecCCCcHHHHHH
Q psy15447 279 VDMIIGSLEHALGSV----GGFCVGSS---------------------------YIIEHHRLSGSGYCFSASLPPFLAVA 327 (457)
Q Consensus 279 ~Di~~~s~sK~lg~~----gG~v~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~aa 327 (457)
+|+++.|++|+++++ ||+++.++ ++.+.++.... ..++..++|..++.
T Consensus 193 ~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~-~~~g~~~~~~~a~~ 271 (412)
T 2cb1_A 193 AHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGL-SLCGMALSPFNAYL 271 (412)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHT-TTTCCCCCHHHHHH
T ss_pred CeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHH-HhcCCCCChHHhHH
Confidence 589999999999642 45555552 34444443220 11233568888877
Q ss_pred HHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEe-cc----------------CCCCeEEEEecCCcchHHHH
Q psy15447 328 ANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQ-GH----------------RDTPLKYLYLQKSDDEVASK 390 (457)
Q Consensus 328 a~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~-~~----------------~~~~~~~i~~~~~~~~~~~~ 390 (457)
+...++.+. +..++..++.+++.+.|.+ .+++... .+ ..+.++.+.+ .+
T Consensus 272 ~~~~l~~l~---~~~~~~~~~~~~l~~~L~~---~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-~~------- 337 (412)
T 2cb1_A 272 LFQGLETVA---LRVARMSETARFLAERLQG---HPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-GD------- 337 (412)
T ss_dssp HHHHGGGHH---HHHHHHHHHHHHHHHHHHT---CTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-SS-------
T ss_pred HHcCCchHH---HHHHHHHHHHHHHHHHHHc---CCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-CC-------
Confidence 777765553 3566777899999999987 4565532 11 2466888888 43
Q ss_pred HHHHHHHHHHHHcCeeEeccc---------cCcccc------------CCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 391 KLLQTICDMCIQAGFAITCPS---------HLDQEA------------KKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 391 ~~~~~~~~~l~~~Gi~v~~~~---------~~~~~~------------~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
...+.+.|.+.||.+ ... +|.... ...++.+|++++..+++++++.+.++|++
T Consensus 338 --~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 338 --LERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp --HHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 234566666789988 552 342200 11157999999999999999999999864
No 185
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.95 E-value=8.8e-26 Score=224.65 Aligned_cols=287 Identities=15% Similarity=0.149 Sum_probs=211.1
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~ 198 (457)
..+...+|++++++++|.+.+++++||++|+..++.+++++||.|++..+.|+++.. .+...|.++..++.+|+++
T Consensus 80 ~~p~~~~le~~lA~l~g~~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~ 159 (430)
T 3ri6_A 80 SNPTVEDLEQRLKNLTGALGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLA 159 (430)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCHHH
T ss_pred CCHHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHH
Confidence 467889999999999999999999999999999999999999999999999988777 5667899999999999999
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
+++.+++ ++++|++|+++||+|.+.|+++|+++|++||+++|+|++++.+.+-. . .. .+
T Consensus 160 l~~ai~~-----------~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~~~---~--~~-----~g 218 (430)
T 3ri6_A 160 VEHACDE-----------TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYLLE---A--KR-----LG 218 (430)
T ss_dssp HHHHCCT-----------TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTTCC---G--GG-----GT
T ss_pred HHHhhCC-----------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCC---h--HH-----cC
Confidence 9988753 56899999999999999999999999999999999999998654311 1 11 23
Q ss_pred ccEEEecCcccccC----cccEEE--ecHHH------------------HHHHHhhCCcceecCCCcHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGS----VGGFCV--GSSYI------------------IEHHRLSGSGYCFSASLPPFLAVAANKALHL 334 (457)
Q Consensus 279 ~Di~~~s~sK~lg~----~gG~v~--~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~ 334 (457)
+|+++.|++|++|+ .||+++ ++..+ ++..+.. ....++..++|..++.++..++.
T Consensus 219 ~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~-~~~~~g~~~~~~~a~l~l~~l~~ 297 (430)
T 3ri6_A 219 VDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKE-VFQNLGPSLSPHNAYLQSLGLET 297 (430)
T ss_dssp CSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHT-HHHHHCCCCCHHHHHHHHHHHHH
T ss_pred CEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHH-HHHhcCCCCCHHHHHHHHhhhhh
Confidence 58999999999975 568877 33222 2222211 11234556788888887777776
Q ss_pred HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC----------------CC-eEEEEecCCcchHHHHHHHHHHH
Q psy15447 335 LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD----------------TP-LKYLYLQKSDDEVASKKLLQTIC 397 (457)
Q Consensus 335 ~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~----------------~~-~~~i~~~~~~~~~~~~~~~~~~~ 397 (457)
+. .++++..+++.++.+.|++ .+++..+..+. +. ++++.+++.. .+.++.
T Consensus 298 l~---~r~~~~~~na~~la~~L~~---~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~~-------~~~~~~ 364 (430)
T 3ri6_A 298 MA---LRIERSCQNAQELAHWLLS---IPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESKE-------ASYRFM 364 (430)
T ss_dssp HH---HHHHHHHHHHHHHHHHHTT---CTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHH-------HHHHHH
T ss_pred HH---HHHHHHHHHHHHHHHHHhC---CCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCHH-------HHHHHH
Confidence 64 3667888999999999988 45554322221 44 9999988432 566777
Q ss_pred HHHHHcCeeEeccccCcc------------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 398 DMCIQAGFAITCPSHLDQ------------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 398 ~~l~~~Gi~v~~~~~~~~------------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
+.|.-.++.+..+...+. .....++.+|+++.... .+.+++.|++++
T Consensus 365 ~~l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~E~----~~dl~~dl~~al 429 (430)
T 3ri6_A 365 DALKLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGIEE----IEDLKEDILQAL 429 (430)
T ss_dssp HHCSSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCSSC----HHHHHHHHHHHH
T ss_pred HhCCcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCC----HHHHHHHHHHhh
Confidence 777655555544332211 01234678999997544 455555555443
No 186
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.95 E-value=2.9e-26 Score=229.53 Aligned_cols=340 Identities=11% Similarity=0.084 Sum_probs=226.7
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCC--cccChHHHHHHHHHHHhhcCCC--cEEEecccHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRG--FYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTS 153 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~--~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~ 153 (457)
+|..|+|++++. ..+|++.+++.+++.... ++..+.. ..+..+...++++++++++|.+ .++++++|++|+
T Consensus 17 ~~~~~Ld~~~~~----~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~ 91 (432)
T 3a9z_A 17 NRKVYMDYNATT----PLEPEVIQAVTEAMKEAW-GNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESN 91 (432)
T ss_dssp -CCEECBTTTCC----CCCHHHHHHHHHHHHHCC-SCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHH
T ss_pred CCcEEeeCCccC----CCCHHHHHHHHHHHHHhc-CCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEeCChHHHH
Confidence 466777776653 347999999999997632 1111111 1123456789999999999964 567777789999
Q ss_pred HHHHHhhc--------CCCC-------------EEEEeCcccHHHHHHHH----hcCCeEEEecCC------CHHHHHHH
Q psy15447 154 ASAIAAYV--------KRND-------------AVFVDENINFAIQTGLI----ASRCKVQYFKHN------NMQHLEEL 202 (457)
Q Consensus 154 ~~ai~a~~--------~~gd-------------~v~~~~~~h~~~~~~~~----~~g~~~~~~~~~------d~~~le~~ 202 (457)
..++.+++ ++|| .|+++...|.+...++. ..|.++..++.+ |++++++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~ 171 (432)
T 3a9z_A 92 NLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAA 171 (432)
T ss_dssp HHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHT
T ss_pred HHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHh
Confidence 99998875 4774 66667777887765543 357888877652 67777776
Q ss_pred HHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcC----------cEEEEEcCcccccccCCCCcccccc
Q psy15447 203 LRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQ----------ARIFVDESVSFGTLGSTGHGVTEYF 272 (457)
Q Consensus 203 l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g----------~~li~DEa~~~g~~g~~g~~~~~~~ 272 (457)
++ +++++|++++++|++|.+.|+++|.++|++|| +++|+||+|++|... ... .
T Consensus 172 i~-----------~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~---~~~---~ 234 (432)
T 3a9z_A 172 VR-----------PTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRR---VDV---E 234 (432)
T ss_dssp CC-----------TTEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSC---CCH---H
T ss_pred cc-----------CCceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcc---cCh---h
Confidence 64 24678999999999999999999999999999 999999999865321 111 1
Q ss_pred CCCCCCccEEEecCcccccCcccEEEecHHH-HHHHHhhCC-----cceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHH
Q psy15447 273 GVSTEEVDMIIGSLEHALGSVGGFCVGSSYI-IEHHRLSGS-----GYCFSASLPPFLAVAANKALHLLKAN-PSLLTKL 345 (457)
Q Consensus 273 ~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l 345 (457)
. .++|+++.|+||++|...|+++++++. ...++.... .....++.++..++++.++++.+++. ++..+++
T Consensus 235 ~---~~~d~~~~s~~K~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~ 311 (432)
T 3a9z_A 235 D---LGVDFLTIVGHKFYGPRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHM 311 (432)
T ss_dssp H---HCCSEEEEEGGGTTCCSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred h---cCCCEEEEehhHhcCCcceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 1 134788999999998778999988764 222211100 00112345777777777788765432 4577888
Q ss_pred HHHHHHHHHHhhcccccCC--eEEecc-----CCCCeEEEEecC-CcchHHHHHHHHHHHHHHHHcCeeEeccccCccc-
Q psy15447 346 REKCNTMHSLLSQHKVTQR--FLVQGH-----RDTPLKYLYLQK-SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQE- 416 (457)
Q Consensus 346 ~~~~~~l~~~L~~~~~~~~--~~~~~~-----~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~- 416 (457)
+++++++.+.|++ ++| +.+..+ ..+.++.+.+.+ .. ...++.+.+ +|+.+..+..+...
T Consensus 312 ~~~~~~l~~~L~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l--~~i~~~~G~~~~~~~ 379 (432)
T 3a9z_A 312 RDIRDYLEERLEA---EFGKRIHLNSRFPGVERLPNTCNFSIQGSQL-------RGYMVLAQC--QTLLASVGASCHSDH 379 (432)
T ss_dssp HHHHHHHHHHHHH---HHGGGEEESSCCTTCCBCTTEEEEEECSTTC-------CHHHHHHHC--SSEECBSSCGGGGGG
T ss_pred HHHHHHHHHHHHh---ccCCcEEEeCCCCcccCCCCEEEEEeCCCCC-------cHHHHHHHh--cCeEEeccccccCCC
Confidence 8999999999987 233 332222 123366666654 21 123444444 36666544322110
Q ss_pred ----------cCC----CCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447 417 ----------AKK----QKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQP 454 (457)
Q Consensus 417 ----------~~~----~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~ 454 (457)
... ..+++|++++..+|++|+++++++|++++++++++
T Consensus 380 ~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~~~ 431 (432)
T 3a9z_A 380 EDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEGP 431 (432)
T ss_dssp TTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 000 13789999999889999999999999999887654
No 187
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.95 E-value=1.7e-26 Score=228.56 Aligned_cols=330 Identities=10% Similarity=0.026 Sum_probs=218.6
Q ss_pred eeeEEeecCCccCCC----CChhhHHHHHH-HHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CC--cEEEecc
Q psy15447 80 IPCINFATHNYLSFV----ENPDIEKCAID-CIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LE--ETALYSF 148 (457)
Q Consensus 80 ~~~id~~s~~~l~~~----~~p~i~~a~~~-~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~--~~i~~~s 148 (457)
..++||+.+.|++.. .+|++.+++.+ +++..+.. ++....|..+.++++++.+.+..+ .+ .++++++
T Consensus 26 ~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~--~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g 103 (397)
T 3fsl_A 26 SDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGAS--LYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLG 103 (397)
T ss_dssp SCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCC--CCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESH
T ss_pred CCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccc--cCCCCCchHHHHHHHHHHHhcCCcccccccceEEEEcCC
Confidence 468999988554332 23789999988 77653321 122233455555555555544333 34 5677788
Q ss_pred cHHHHHHHH--HhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC----C---CHHHHHHHHHhhchhcccCCCCccE
Q psy15447 149 GFSTSASAI--AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH----N---NMQHLEELLRQQDERDTLNSKVTKK 219 (457)
Q Consensus 149 G~~a~~~ai--~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~----~---d~~~le~~l~~~~~~~~~~~~~~~~ 219 (457)
|++|+..++ .+++++||.|+++.++|..+...++..|.++..++. + |++++++.+++.. ++++
T Consensus 104 ~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--------~~~~ 175 (397)
T 3fsl_A 104 GSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQ--------AGSI 175 (397)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCC--------TTCE
T ss_pred cHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCC--------CCCE
Confidence 889999885 455789999999999999999999999999998876 4 8999999997532 3568
Q ss_pred EEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCC--CccccccCCCCCCccEEEecCcccccCcc
Q psy15447 220 FIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTG--HGVTEYFGVSTEEVDMIIGSLEHALGSVG 294 (457)
Q Consensus 220 ~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g--~~~~~~~~~~~~~~Di~~~s~sK~lg~~g 294 (457)
++++++++||+|.+.+ +++|+++|++||+++|+||+|+.+.++..+ ..+....+. .+.+++++|+||++|.+|
T Consensus 176 ~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~~~G 253 (397)
T 3fsl_A 176 VLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASA--GLPALVSNSFSKIFSLYG 253 (397)
T ss_dssp EEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHT--TCCEEEEEECTTTTTCGG
T ss_pred EEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhc--CCCEEEEecccccccCcC
Confidence 8999999999999977 559999999999999999999876554111 111111112 233688999999998666
Q ss_pred ---cEEEe---cHHHHHHHHhhCCc---ceecCCCcHHHHHHHHHHHHH-------HhhCcHHHHHHHHHHHHHHHHhhc
Q psy15447 295 ---GFCVG---SSYIIEHHRLSGSG---YCFSASLPPFLAVAANKALHL-------LKANPSLLTKLREKCNTMHSLLSQ 358 (457)
Q Consensus 295 ---G~v~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~aaa~a~l~~-------~~~~~~~~~~l~~~~~~l~~~L~~ 358 (457)
||+++ +++.++.+...... ..++ +.+++..+++.+.++. .+..++++++++++.+++.+.|++
T Consensus 254 ~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 332 (397)
T 3fsl_A 254 ERVGGLSVMCEDAEAAGRVLGQLKATVRRNYS-SPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLST 332 (397)
T ss_dssp GCCEEEEEECSSHHHHHHHHHHHHHHHHTTTS-SCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeeEEEEecCCHHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88763 45555543221110 1111 2244444444433321 122245778889999999999987
Q ss_pred ccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHH
Q psy15447 359 HKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMN 438 (457)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~ 438 (457)
+....++.+..+..+.+.++.+. ...+.+.|.++||++.++ + ||+++ .+|+++|+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~gi~v~~g-----------~--Ris~~-~~~~~~i~ 387 (397)
T 3fsl_A 333 EMPERNFDYLLNQRGMFSYTGLS-----------AAQVDRLREEFGVYLIAS-----------G--RMCVA-GLNTANVQ 387 (397)
T ss_dssp HCTTSCCTHHHHCCSSEEECCCC-----------HHHHHHHHHTTCEECCTT-----------C--EEEGG-GCCTTTHH
T ss_pred cCCCCCceeecCCceEEEecCCC-----------HHHHHHHHHhCCEEECCC-----------C--eEEEE-ecCHhhHH
Confidence 32101555544445555554432 123566677789998753 1 88885 35778899
Q ss_pred HHHHHHHHH
Q psy15447 439 SLIETLCKS 447 (457)
Q Consensus 439 ~~~~~l~~~ 447 (457)
+++++|+++
T Consensus 388 ~~~~~l~~~ 396 (397)
T 3fsl_A 388 RVAKAFAAV 396 (397)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999999875
No 188
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.95 E-value=2.4e-26 Score=224.29 Aligned_cols=313 Identities=11% Similarity=0.136 Sum_probs=215.1
Q ss_pred ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCE--EEEeCcc
Q psy15447 96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDA--VFVDENI 173 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~--v~~~~~~ 173 (457)
+|++.+|+.+.+. ...|+..+...+|++++++++|.+..+++++|++|+..++++++.+||. |+++..+
T Consensus 28 ~p~v~~ai~~~~~---------~~~~~~~~~~~~l~~~la~~~~~~~~i~~~~g~~a~~~a~~~~~~~g~~~vvi~~~~~ 98 (359)
T 3pj0_A 28 LTEALQNIDDNLE---------SDIYGNGAVIEDFETKIAKILGKQSAVFFPSGTMAQQIALRIWADRKENRRVAYHPLS 98 (359)
T ss_dssp HHHHTTTSCTTCB---------CCBTTBSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTC
T ss_pred CHHHHHHHHhhcc---------cCcccCCHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHHhcCCCcEEEEeccc
Confidence 4666666555221 1234556788999999999999998888999999999999999888775 7777777
Q ss_pred cHHHHH--HH-HhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC-CCCCChH---HHHHH
Q psy15447 174 NFAIQT--GL-IASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS-ADICPLK---DILSL 242 (457)
Q Consensus 174 h~~~~~--~~-~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~-G~i~~l~---~i~~l 242 (457)
|..... .. ...|.++..++.+ |++++++. . +++++|++++++|++ |.+.|.+ +|+++
T Consensus 99 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~--~----------~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~ 166 (359)
T 3pj0_A 99 HLEIHEQDGLKELQQITPLLLGTANQLLTIDDIKSL--R----------EPVSSVLIELPQREIGGQLPAFEELEKISEY 166 (359)
T ss_dssp HHHHSSTTHHHHHHCCEEEECSCTTSCCCHHHHHTC--S----------SCCSEEEEESSBGGGTSBCCCHHHHHHHHHH
T ss_pred eeeehhcchHHHhcCceEEecCCcCCCcCHHHHHhc--c----------CCceEEEEEecccCCCcccCCHHHHHHHHHH
Confidence 765432 22 4568888887754 67777765 1 356788999998886 7888855 55999
Q ss_pred HHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC-cccEEEecHHHHHHHHhhCCcceecCCCc
Q psy15447 243 RSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS-VGGFCVGSSYIIEHHRLSGSGYCFSASLP 321 (457)
Q Consensus 243 ~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~-~gG~v~~~~~~~~~~~~~~~~~~~~~~~~ 321 (457)
|++||++||+||+|.++.....+...... . ...|+++.|+||++++ .||++++++++++.++.....+..+....
T Consensus 167 ~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~---~~~d~~~~s~sK~~~~~~gg~~~~~~~l~~~~~~~~~~~~~~~~~~ 242 (359)
T 3pj0_A 167 CHEQGISLHLDGARLWEITPFYQKSAEEI-C---ALFDSVYVSFYKGIGGIAGAILAGNDDFVQEAKIWKRRYGGDLISL 242 (359)
T ss_dssp HHHHTCEEEEEETTCGGGHHHHTCCHHHH-H---TTCSEEEEESSSTTCCSSCEEEEECHHHHHHHHHHHHHTTCCCSCC
T ss_pred HHHcCCEEEEECcchhcchhhhCCCHHHh-h---ccCCEEEEeccccCCCcceEEEECCHHHHHHHHHHHHHhCCCcchh
Confidence 99999999999998765432111111111 1 2347888899999964 45788899999888764221111111123
Q ss_pred HHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEe-ccCCCCeEEEEecCCcchHHHHHHHHHHHHHH
Q psy15447 322 PFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQ-GHRDTPLKYLYLQKSDDEVASKKLLQTICDMC 400 (457)
Q Consensus 322 ~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 400 (457)
...++++..+++... +..++..++.+++.+.|++ ++|+.+. .++.++++++.+.... .....++.+.|
T Consensus 243 ~~~~~a~~~~l~~~~---~~~~~~~~~~~~l~~~L~~---~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~l 311 (359)
T 3pj0_A 243 YPYILSADYYFEKRI---GKMAEYFEAAKGLAERFNS---CSGVKTVPEVPVSNMFHVYFENSA-----DEIGAILTKIQ 311 (359)
T ss_dssp HHHHHHHHHHHHHHG---GGHHHHHHHHHHHHHHHHT---STTEEEESSSCSSSEEEEEESSCH-----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHhh---CCCceeeccCCcceEEEEEecCcc-----chhHHHHHHHH
Confidence 333344445554432 3456678889999999988 5688874 3567788888876542 11356788999
Q ss_pred HHcCeeEeccccCccccCCCCCeEEEEecC---CCCHHHHHHHHHHHHHH
Q psy15447 401 IQAGFAITCPSHLDQEAKKQKPSIRITCNI---SHTEQDMNSLIETLCKS 447 (457)
Q Consensus 401 ~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~---~~t~edi~~~~~~l~~~ 447 (457)
.++||.++++..+.. .+..++|+++.. ..+.++++++++.|.++
T Consensus 312 ~~~GV~v~~g~~~~~---~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 312 DETGVGISGYLQEKS---ADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp HHHCEECCSCCEEEE---TTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred HhcCcEecCCccccC---CCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 999999988754321 234689998753 35788888888888764
No 189
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.95 E-value=1.2e-25 Score=222.03 Aligned_cols=288 Identities=13% Similarity=0.134 Sum_probs=211.4
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQH 198 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~ 198 (457)
..+...++++++|+++|.+..++++||++|+..+++ ++++||.|++..+.|.+.... ++..|.++..++.+| ++
T Consensus 53 ~~~~~~~lr~~la~~~g~~~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d-~~ 130 (393)
T 1n8p_A 53 QNPNRENLERAVAALENAQYGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLL-ND 130 (393)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHH-HH
T ss_pred CChhHHHHHHHHHHHhCCCcEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCCh-HH
Confidence 346688999999999999889999999999999999 889999999999998866553 345688888888877 77
Q ss_pred HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc----CcEEEEEcCcccccccCCCCccccccCC
Q psy15447 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY----QARIFVDESVSFGTLGSTGHGVTEYFGV 274 (457)
Q Consensus 199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~----g~~li~DEa~~~g~~g~~g~~~~~~~~~ 274 (457)
+++.++ +++++|++++++|++|.+.|+++|.++|++| |+++|+||+|+.+.+.. ... +
T Consensus 131 l~~~i~-----------~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~~----~~~-~-- 192 (393)
T 1n8p_A 131 LPQLIK-----------ENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISN----PLN-F-- 192 (393)
T ss_dssp HHHHSC-----------SSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHCC----GGG-G--
T ss_pred HHHhcc-----------cCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccCC----HHH-c--
Confidence 777664 3568999999999999999999999999999 99999999998765431 111 2
Q ss_pred CCCCccEEEecCcccccCcc----cEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHH
Q psy15447 275 STEEVDMIIGSLEHALGSVG----GFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKC 349 (457)
Q Consensus 275 ~~~~~Di~~~s~sK~lg~~g----G~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~ 349 (457)
++|+++.|++|.+|+.| |+++++ +++++.++.... .++.++++..++++.++++.+ +..+++..++.
T Consensus 193 ---~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~--~~g~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~ 264 (393)
T 1n8p_A 193 ---GADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQN--AIGAIPSPFDAWLTHRGLKTL---HLRVRQAALSA 264 (393)
T ss_dssp ---TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHH--HHCCCCCHHHHHHHHHHHTTH---HHHHHHHHHHH
T ss_pred ---CCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHH--hcCCCCCHHHHHHHHhccchH---HHHHHHHHHHH
Confidence 35899999999998654 999884 788887764321 234455777777766666543 23567777888
Q ss_pred HHHHHHhhcccccCC-eEEe-cc----------------C-C-CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEec
Q psy15447 350 NTMHSLLSQHKVTQR-FLVQ-GH----------------R-D-TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITC 409 (457)
Q Consensus 350 ~~l~~~L~~~~~~~~-~~~~-~~----------------~-~-~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~ 409 (457)
..+.+.|++. +. +.-. .+ . . +.++++.++... .....+.+.|...++.++.
T Consensus 265 ~~l~~~L~~~---~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~------~~~~~~l~~l~~~~~~~s~ 335 (393)
T 1n8p_A 265 NKIAEFLAAD---KENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGA------EAASKFASSTRLFTLAESL 335 (393)
T ss_dssp HHHHHHHTSC---TTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCH------HHHHHHHHHCSSSEECSCC
T ss_pred HHHHHHHHhC---CCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcH------HHHHHHHhhCCcceECCCC
Confidence 8888888773 22 2211 01 1 3 678888887531 1445666666544555443
Q ss_pred ccc------Ccc--c----------cCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 410 PSH------LDQ--E----------AKKQKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 410 ~~~------~~~--~----------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
+.. |.. . .....+.+|++++...++++++.+.++|+++
T Consensus 336 G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 336 GGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp CCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred CCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 321 111 0 0112578999999999999999999999865
No 190
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.95 E-value=4.1e-25 Score=221.52 Aligned_cols=323 Identities=12% Similarity=0.084 Sum_probs=227.4
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHH
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAI 157 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai 157 (457)
+|+++|.|..+.+ .+++.+++.+++.... +...+...++++++++++|.+.++++++|++|+..++
T Consensus 29 ~~~~~i~~~~~~~-----~~~~~~a~~~~~~~~~---------~~~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~al 94 (437)
T 3bb8_A 29 AGKSVVPPSGKVI-----GTKELQLMVEASLDGW---------LTTGRFNDAFEKKLGEYLGVPYVLTTTSGSSANLLAL 94 (437)
T ss_dssp TTTSCBCSCCCCC-----CHHHHHHHHHHHHHCC---------CBSCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHH
T ss_pred CCCccccCCCCCC-----CHHHHHHHHHHHHcCC---------cCCChHHHHHHHHHHHHHCCCcEEEeCCHHHHHHHHH
Confidence 4677777765433 5889999999987632 1234568899999999999999999999999999999
Q ss_pred Hhh---------cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447 158 AAY---------VKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFII 222 (457)
Q Consensus 158 ~a~---------~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi 222 (457)
.++ .++||.|++..+.|.++...+...|.++..++.+ |++++++.+.+ ++++|+
T Consensus 95 ~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~-----------~~~~v~ 163 (437)
T 3bb8_A 95 TALTSPKLGVRALKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDIPTYNVNASLIEAAVSD-----------KTKAIM 163 (437)
T ss_dssp HHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHHHHTTCEEEECCEETTTTEECGGGHHHHCCT-----------TEEEEE
T ss_pred HHhhhcccccccCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccCccCCcCHHHHHHhcCC-----------CCeEEE
Confidence 988 7899999999999999999999999998887653 68888877742 345666
Q ss_pred EecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc---CcccEEEe
Q psy15447 223 VEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG---SVGGFCVG 299 (457)
Q Consensus 223 ~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg---~~gG~v~~ 299 (457)
+.+ +.|...++++|.++|++||+++|+||+|++|... .+. .++. ..|+++.||+|+.+ +.||++++
T Consensus 164 ~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~----~~~~---~~d~~~~s~~~~k~l~~g~gg~~~~ 232 (437)
T 3bb8_A 164 IAH---TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTY-DGK----MAGT---FGDIGTVSFYPAKHITMGEGGAVFT 232 (437)
T ss_dssp EEC---GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEE-TTE----ETTS---SSSEEEEECSTTSSSCCSSCEEEEE
T ss_pred EeC---CCCChhcHHHHHHHHHHcCCEEEEECccccCceE-CCe----eccc---ccCEEEEECcCCcCCCCCCeEEEEe
Confidence 643 3466789999999999999999999999876543 221 2232 13788888855443 45689888
Q ss_pred cHHHHHH-HHh---hCCc----------------------------------ceecCCCcHHHHHHHHHHHHHHhhCcHH
Q psy15447 300 SSYIIEH-HRL---SGSG----------------------------------YCFSASLPPFLAVAANKALHLLKANPSL 341 (457)
Q Consensus 300 ~~~~~~~-~~~---~~~~----------------------------------~~~~~~~~~~~~aaa~a~l~~~~~~~~~ 341 (457)
+++.+.. ++. .... ..+...++++.+++++++++.++ +.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~~~---~~ 309 (437)
T 3bb8_A 233 QSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLERIE---EF 309 (437)
T ss_dssp SCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHHHH---HH
T ss_pred CCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHHHH---HH
Confidence 8554333 221 1110 01122357888888888877653 35
Q ss_pred HHHHHHHHHHHHHHhhcccccCCeEEeccC------CCCeEEEEecC--CcchHHHHHHHHHHHHHHHHcCeeEeccccC
Q psy15447 342 LTKLREKCNTMHSLLSQHKVTQRFLVQGHR------DTPLKYLYLQK--SDDEVASKKLLQTICDMCIQAGFAITCPSHL 413 (457)
Q Consensus 342 ~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~------~~~~~~i~~~~--~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~ 413 (457)
.++.+++.+++.+.|++ ++++.+.... ....+.+.+.. .. ...++.+.|.++||.++....|
T Consensus 310 ~~~~~~~~~~l~~~L~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L~~~GI~v~~~~~~ 379 (437)
T 3bb8_A 310 VEKRKANFKYLKDALQS---CADFIELPEATENSDPSWFGFPITLKEDSGV-------SRIDLVKFLDEAKVGTRLLFAG 379 (437)
T ss_dssp HHHHHHHHHHHHHHGGG---GTTTEECCCCCTTEECCCSSEEEEECGGGSS-------CHHHHHHHHHHTTBCCBCCTTS
T ss_pred HHHHHHHHHHHHHHhhc---cCCccccCCCCCCCceeeEEEEEEECCcCcC-------cHHHHHHHHHHCCCceeccCCc
Confidence 56668889999999988 4454433211 11223343432 11 3457899999999999876542
Q ss_pred cc-ccCC------------------CCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447 414 DQ-EAKK------------------QKPSIRITCNISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 414 ~~-~~~~------------------~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 449 (457)
.. ..+. ..+.+|++++..+|++|+++++++|+++++
T Consensus 380 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 380 NLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp SGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred ccccCchhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 11 0010 012499999999999999999999988753
No 191
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.95 E-value=9.2e-26 Score=220.98 Aligned_cols=303 Identities=15% Similarity=0.092 Sum_probs=220.6
Q ss_pred hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccH
Q psy15447 97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINF 175 (457)
Q Consensus 97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~ 175 (457)
|++.+++.+++... .++..+...++++++++++|.+.+++++||++|+..++.++ .++||.|+++.++|.
T Consensus 16 ~~v~~a~~~~~~~~---------~~~~~~~~~~l~~~la~~~~~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~ 86 (367)
T 3nyt_A 16 DKIDAGIQRVLRHG---------QYILGPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYV 86 (367)
T ss_dssp HHHHHHHHHHHHHC---------CCSSCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCT
T ss_pred HHHHHHHHHHHhcC---------CccCChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccH
Confidence 55666666666542 12245678899999999999999999999999999999999 899999999999999
Q ss_pred HHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcE
Q psy15447 176 AIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR 249 (457)
Q Consensus 176 ~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~ 249 (457)
++...+...|.++..++.+ |++++++.+. +++++|+ +.+++|...++++|+++|++||++
T Consensus 87 ~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~-----------~~~~~v~---~~~~~G~~~~~~~i~~la~~~~~~ 152 (367)
T 3nyt_A 87 ATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAIT-----------PRTKAII---PVSLYGQCADFDAINAIASKYGIP 152 (367)
T ss_dssp HHHHHHHHTTCEEEEECBCTTTCSBCGGGTGGGCC-----------TTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCEEEEEecCCccCCcCHHHHHHhcC-----------cCCcEEE---eeCCccChhhHHHHHHHHHHcCCE
Confidence 9999999999998887643 7788877663 2456666 445789999999999999999999
Q ss_pred EEEEcCcccccccCCCCccccccCCCCCCccEEEecC--cccccC--cccEEEe-cHHHHHHHHhhCC-cc---------
Q psy15447 250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSL--EHALGS--VGGFCVG-SSYIIEHHRLSGS-GY--------- 314 (457)
Q Consensus 250 li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~--sK~lg~--~gG~v~~-~~~~~~~~~~~~~-~~--------- 314 (457)
+|+||+|++|... .+. ..+.- . |+++.|| +|.+|+ .||++++ ++++.+.++.... +.
T Consensus 153 li~D~a~~~g~~~-~~~----~~~~~--~-di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~ 224 (367)
T 3nyt_A 153 VIEDAAQSFGASY-KGK----RSCNL--S-TVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIARHGQDRRYHHIRV 224 (367)
T ss_dssp BEEECTTTTTCEE-TTE----ETTSS--S-SEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEETTEECSC
T ss_pred EEEECccccCCeE-CCe----eccCC--C-CEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHHhcCCCcCceeecc
Confidence 9999999876542 122 12211 1 7888897 899976 3688777 4677776654321 11
Q ss_pred eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-----CCCeEEEEecCCcchHHH
Q psy15447 315 CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR-----DTPLKYLYLQKSDDEVAS 389 (457)
Q Consensus 315 ~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~ 389 (457)
.++..++++.++++++.++.++ +..++.+++.+++.+.|++ .++.+.... ....+.+.+.
T Consensus 225 g~~~~~~~~~aa~~~~~l~~~~---~~~~~~~~~~~~~~~~L~~----~~~~~~~~~~~~~~~~~~~~~~~~-------- 289 (367)
T 3nyt_A 225 GVNSRLDTLQAAILLPKLEIFE---EEIALRQKVAAEYDLSLKQ----VGIGTPFIEVNNISVYAQYTVRMD-------- 289 (367)
T ss_dssp CCBCCCCHHHHHHHHHHHHTHH---HHHHHHHHHHHHHHHHHHH----TTCCCCCCCTTEECCCSSEEEECS--------
T ss_pred CcCCCccHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcc----CCeeccCCCCCCceeeEEEEEEeC--------
Confidence 1344578999888888877664 3667788889999999988 343332111 1233444443
Q ss_pred HHHHHHHHHHHHHcCeeEecccc-Ccccc--CC------------CCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447 390 KKLLQTICDMCIQAGFAITCPSH-LDQEA--KK------------QKPSIRITCNISHTEQDMNSLIETLCKS 447 (457)
Q Consensus 390 ~~~~~~~~~~l~~~Gi~v~~~~~-~~~~~--~~------------~~~~lRi~~~~~~t~edi~~~~~~l~~~ 447 (457)
...++.+.|.++||.++.... |.... .. ....+|+++...+|++|+++++++|++.
T Consensus 290 --~~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 290 --NRESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp --SHHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred --CHHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 234788999999999876532 21100 00 1347999999999999999999999765
No 192
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.95 E-value=1.4e-25 Score=228.59 Aligned_cols=348 Identities=11% Similarity=0.079 Sum_probs=224.5
Q ss_pred eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHH----HHHHHHhhcCC---CcEEEecccHHHHH
Q psy15447 82 CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLD----LENDIASFMGL---EETALYSFGFSTSA 154 (457)
Q Consensus 82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~----l~~~la~~~g~---~~~i~~~sG~~a~~ 154 (457)
.+++.+..|+++...+....++.+.+..+.... +...++..+...+ +.+++++++|. +..+++++|++|+.
T Consensus 95 ~~~~~~~~yl~~~~~~~~~~~v~~~~~~~~~n~--~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~ 172 (497)
T 2qma_A 95 AIFTQHPDCIAHLHTPPLMPAVAAEAMIAALNQ--SMDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQ 172 (497)
T ss_dssp SCCTTSTTBCSSSCCCCBHHHHHHHHHHHHHCC--CTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHH
T ss_pred CCCCCCCCeeEeCCCCCcHHHHHHHHHHHhhcc--cccchhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHH
Confidence 345666677777755444444444433322221 1222333334444 45559999986 45788889999999
Q ss_pred HHHHhh----c---------CC------CC-EEEEeCcccHHHHHHHHhcCC---eEEEecCC-----CHHHHHHHHHhh
Q psy15447 155 SAIAAY----V---------KR------ND-AVFVDENINFAIQTGLIASRC---KVQYFKHN-----NMQHLEELLRQQ 206 (457)
Q Consensus 155 ~ai~a~----~---------~~------gd-~v~~~~~~h~~~~~~~~~~g~---~~~~~~~~-----d~~~le~~l~~~ 206 (457)
.++.++ . ++ ++ .|+++...|.++..++...|. +++.++.+ |+++|++.+++.
T Consensus 173 ~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~ 252 (497)
T 2qma_A 173 MGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANADGTMDITKLDEVIAQA 252 (497)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSSBCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCCCCcCCHHHHHHHHHHH
Confidence 988773 2 12 46 789999999999999888875 68888765 899999999764
Q ss_pred chhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecC
Q psy15447 207 DERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSL 286 (457)
Q Consensus 207 ~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~ 286 (457)
... ...+.+|+++.+++++|.+.|+++|+++|++||+++++|++|+.+.+....+. ...++ .++|+++.|+
T Consensus 253 ~~~-----~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~--~~~gi--~~~D~i~~s~ 323 (497)
T 2qma_A 253 KAE-----GLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSSHKS--RLKGV--ERAHSISVDF 323 (497)
T ss_dssp HHT-----TCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGG--GGTTG--GGCSEEEEET
T ss_pred HHC-----CCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchH--hhcCc--ccCCEEEEcc
Confidence 210 01234777888888999999999999999999999999999987665322111 12233 3568999999
Q ss_pred cccccCc--ccEEEec-HHHHHHHHhhCCcceecCC---CcHHHH----------HHHHHHHHHHhh--CcHHHHHHHHH
Q psy15447 287 EHALGSV--GGFCVGS-SYIIEHHRLSGSGYCFSAS---LPPFLA----------VAANKALHLLKA--NPSLLTKLREK 348 (457)
Q Consensus 287 sK~lg~~--gG~v~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~----------aaa~a~l~~~~~--~~~~~~~l~~~ 348 (457)
||+++.+ .|+++.+ +..++.+.. ...|.++.. .++..+ .+..++++.+.. ..++.++..++
T Consensus 324 hK~l~~p~~~G~l~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~ 402 (497)
T 2qma_A 324 HKLFYQTISCGALLVNDKSNFKFLLH-HADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQ 402 (497)
T ss_dssp TTTTCCCSSCEEEEESCGGGGGGGCC---------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hhccCCCcceEEEEEeCHHHHHHhcC-CchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 9998643 3666554 443433321 112222111 111111 111233444322 13567888899
Q ss_pred HHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe
Q psy15447 349 CNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC 428 (457)
Q Consensus 349 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~ 428 (457)
++++.+.|++ .+++++..++..+++++.+...... ......++.+.|.++|+.+.+... ..+.+++|+++
T Consensus 403 a~~l~~~L~~---~~~~~~~~~~~~~~v~f~~~~~~~~--~~~l~~~l~~~l~~~G~~~~~~~~-----~~g~~~lRis~ 472 (497)
T 2qma_A 403 TLEVADMIRT---NDQFELLAEPSLSTVLFRATHETAD--LDELNKALRLEALTRGIAVLGETI-----VDGKTALKFTI 472 (497)
T ss_dssp HHHHHHHHHT---CTTEEECSCCSSSEEEEEECCSSSC--HHHHHHHHHHHHHHHTSCBCEEEE-----ETTEEEEEEEC
T ss_pred HHHHHHHHhh---CCCeEEEcCCCceEEEEEEcCCccC--HHHHHHHHHHHHHhCCCEEEEeeE-----ECCEEEEEEEe
Confidence 9999999988 5688886566778888887643110 011345678889999988754321 22346899998
Q ss_pred -cCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 429 -NISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 429 -~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
+..+|++|+++++++|+++++++
T Consensus 473 ~~~~~t~edi~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 473 LNPCLTTSDFESLLSKINMLAVEL 496 (497)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCHHHHHHHHHHHHHHHHhh
Confidence 88899999999999999988754
No 193
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.94 E-value=1.3e-24 Score=214.90 Aligned_cols=321 Identities=12% Similarity=0.138 Sum_probs=226.5
Q ss_pred ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCccc
Q psy15447 96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENIN 174 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h 174 (457)
.|++.+++.+.+.. +..+ + ..+...++++++++++|.+.++++++|++|+..++.++ .++||.|+++.+.|
T Consensus 11 ~~~v~~a~~~~~~~-~~~~--~-----~g~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~ 82 (394)
T 1o69_A 11 GGNELKYIEEVFKS-NYIA--P-----LGEFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGVKQDDIVLASSFTF 82 (394)
T ss_dssp -CCHHHHHHHHHHH-TTTS--C-----TTHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSC
T ss_pred CHHHHHHHHHHHHc-CCcc--C-----CChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCcc
Confidence 47889999988875 2111 0 13567899999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcE
Q psy15447 175 FAIQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR 249 (457)
Q Consensus 175 ~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~ 249 (457)
.++...+...|.++..++. .|++++++.+++.. +++++|++++ ++|...++++|.++|++||++
T Consensus 83 ~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~--------~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~ 151 (394)
T 1o69_A 83 IASVAPICYLKAKPVFIDCDETYNIDVDLLKLAIKECE--------KKPKALILTH---LYGNAAKMDEIVEICKENDIV 151 (394)
T ss_dssp GGGTHHHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCS--------SCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHcCCEEEEEEeCCCCCcCHHHHHHHHhccc--------CCceEEEEEC---CCCChhhHHHHHHHHHHcCCE
Confidence 9998888999999888874 37899999886521 1356777775 678899999999999999999
Q ss_pred EEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-CcccEEEec-HHHHHHHHhhCCcce-----e------
Q psy15447 250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVGS-SYIIEHHRLSGSGYC-----F------ 316 (457)
Q Consensus 250 li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~-~~~~~~~~~~~~~~~-----~------ 316 (457)
+|+||+|++|... .+..... + .++|+...|.+|.++ ..+|+++++ +++++.++....... +
T Consensus 152 li~Dea~~~g~~~-~~~~~~~-~----~~~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g 225 (394)
T 1o69_A 152 LIEDAAEALGSFY-KNKALGT-F----GEFGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYG 225 (394)
T ss_dssp EEEECTTCTTCEE-TTEETTS-S----SSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCC
T ss_pred EEEECcCccccee-CCccccc-c----cCcEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCccccccccC
Confidence 9999999865431 1221111 1 235666556689886 456899985 788887764321110 1
Q ss_pred -cCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-----CCCeEEEEecCCcc-----
Q psy15447 317 -SASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR-----DTPLKYLYLQKSDD----- 385 (457)
Q Consensus 317 -~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~~----- 385 (457)
...++++.++.+++.++.++ +..++++++.+++.+.|++ . +.+.... ..+++++.++....
T Consensus 226 ~~~~~~~~~aa~~l~~l~~l~---~~~~~~~~~~~~l~~~L~~----~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 297 (394)
T 1o69_A 226 YNYRLSNVLGAIGVAQMEVLE---QRVLKKREIYEWYKEFLGE----Y-FSFLDELENSRSNRWLSTALINFDKNELNAC 297 (394)
T ss_dssp CBCBCCHHHHHHHHHHHTTHH---HHHHHHHHHHHHHHHHHTT----T-EECCCCCTTEECCCSSEEEEESCCGGGSCCC
T ss_pred cccCcCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcc----c-ccccCCCCCCcceeEEEEEEecchhhccccc
Confidence 11147777777766665554 3678899999999999988 3 5544321 12256677653200
Q ss_pred ---------hHHHHHHHHHHHHHHHHcCeeEeccccCccccCC--C-------------CCeEEEEecCCCCHHHHHHHH
Q psy15447 386 ---------EVASKKLLQTICDMCIQAGFAITCPSHLDQEAKK--Q-------------KPSIRITCNISHTEQDMNSLI 441 (457)
Q Consensus 386 ---------~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~--~-------------~~~lRi~~~~~~t~edi~~~~ 441 (457)
.........++.+.|.++||.++++..|....+. . ...+++..+..+|++|+++++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~ 377 (394)
T 1o69_A 298 QKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEIS 377 (394)
T ss_dssp CEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHH
T ss_pred cccccccccccccccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHH
Confidence 0000013567899999999999887543210010 0 035666678889999999999
Q ss_pred HHHHHHHH
Q psy15447 442 ETLCKSHD 449 (457)
Q Consensus 442 ~~l~~~~~ 449 (457)
++|+++++
T Consensus 378 ~~l~~~~~ 385 (394)
T 1o69_A 378 KLILKSIK 385 (394)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99998754
No 194
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.94 E-value=9.1e-26 Score=221.50 Aligned_cols=328 Identities=14% Similarity=0.116 Sum_probs=213.6
Q ss_pred Ce-eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC---CcEEEecccHHHHH
Q psy15447 79 GI-PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL---EETALYSFGFSTSA 154 (457)
Q Consensus 79 G~-~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~---~~~i~~~sG~~a~~ 154 (457)
|+ +++|++.... ....++++.+++. .++ +......++++.+++++|. +.++++++|++|+.
T Consensus 26 g~~~v~~~~~~~~-~~~~~~~v~~a~~----~~~----------~~~~~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~ 90 (374)
T 2aeu_A 26 GRDALYDLSGLSG-GFLIDEKDKALLN----TYI----------GSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAIL 90 (374)
T ss_dssp CGGGCEECSSCCC-CCCCCHHHHHHHT----STT----------HHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred CccceeeecccCC-CCCCCHHHHHHHH----Hhc----------CchHHHHHHHHHHHHHhCCCCcceEEEEcChHHHHH
Confidence 55 6778776432 1122456666553 221 1234456788888888898 77889999999999
Q ss_pred HHHHhhcCCCCEEEEeCcc---cHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEE-EEEecCCCCC
Q psy15447 155 SAIAAYVKRNDAVFVDENI---NFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKF-IIVEGVYMNS 230 (457)
Q Consensus 155 ~ai~a~~~~gd~v~~~~~~---h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~-vi~e~v~~~~ 230 (457)
.++.++ +||.|++..+. |......+...|.++..+ .|++++++. . +++++ |++++++|++
T Consensus 91 ~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v--~d~~~l~~~-~-----------~~~~~~v~~~~p~npt 154 (374)
T 2aeu_A 91 ATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES--DKVGEILNK-I-----------DKDTLVIITGSTMDLK 154 (374)
T ss_dssp HHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE--SCHHHHHTT-C-----------CTTEEEEEECBCTTSC
T ss_pred HHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe--CCHHHHHhc-C-----------CCccEEEEEccCCCCC
Confidence 999988 99999998884 344444677789888888 688888765 2 24577 8899999999
Q ss_pred C-CCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-CcccEEEecHHHHHHHH
Q psy15447 231 A-DICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVGSSYIIEHHR 308 (457)
Q Consensus 231 G-~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~~~~~~~~~ 308 (457)
| ...++++|.++|++||+++|+||+|+.+..+.........+ ++|++++|+||+++ ..+|++++++++++.++
T Consensus 155 G~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~-----~~di~~~S~sK~l~g~~~G~~~~~~~~~~~l~ 229 (374)
T 2aeu_A 155 VIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKL-----GADLVVTSTDKLMEGPRGGLLAGKKELVDKIY 229 (374)
T ss_dssp BCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHH-----TCSEEEEETTSSSSSCSCEEEEEEHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCcccc-----CCcEEEecCcccccCcceEEEEECHHHHHHHH
Confidence 9 78889999999999999999999987653211111001111 23899999999995 56799999999998876
Q ss_pred hhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHH--------HHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447 309 LSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKC--------NTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL 380 (457)
Q Consensus 309 ~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~--------~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~ 380 (457)
... ..++.+.+++.++++.++++.+.. +.+++..++. +.+.+.|.......|+.+...+.+.+++. .
T Consensus 230 ~~~--~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~-~ 304 (374)
T 2aeu_A 230 IEG--TKFGLEAQPPLLAGIYRALKNFNL--ERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKR-V 304 (374)
T ss_dssp HHH--HTTTCBCCHHHHHHHHHHHHHCCH--HHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEE-E
T ss_pred Hhh--ccccCCCCHHHHHHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEe-e
Confidence 543 223345688888888888876522 2334444444 34444444411013555533334433332 2
Q ss_pred cCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecC-CCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 381 QKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNI-SHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~-~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
.... . .......+++..++ ++||.+.++..+ +...+++||+++. ..+++++++++++++++++++..
T Consensus 305 ~~~~-~-~~~~~~~~~~~~ll~~~gV~v~~g~~~----~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~~ 373 (374)
T 2aeu_A 305 YKDD-T-INIKKLIEIGFNLLKNYGIITITVAGM----PGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAFK 373 (374)
T ss_dssp ESSH-H-HHHHHHHHHHHHHHHHHCEECSTTSSS----CSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHTC
T ss_pred cccc-c-ccccchHHHHHHHHHhCCEEEecCCCC----CCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 2111 0 00001223555544 679999876421 2235689999864 33444699999999999987754
No 195
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.94 E-value=7.5e-26 Score=229.38 Aligned_cols=332 Identities=13% Similarity=0.104 Sum_probs=224.3
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHh-cCCCCCCCCCcccChHHH----HHHHHHHHhhcCCCc-----EEEecccH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDK-NGVGSCGPRGFYGTNVVH----LDLENDIASFMGLEE-----TALYSFGF 150 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~-~~~~~~~~~~~~g~~~~~----~~l~~~la~~~g~~~-----~i~~~sG~ 150 (457)
..|++..+. ++ .+|++.+|+.+.+.. |..++.+.+. |+..+.. ..+++++++++|.+. .+++++|+
T Consensus 45 ~~i~L~a~e--~~-~~~~V~eA~~~~l~~~~~~g~p~~~~-y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs 120 (483)
T 1rv3_A 45 VGLELIASE--NF-ASRAVLEALGSCLNNKYSLGYPGQRY-YGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGS 120 (483)
T ss_dssp SSEECCTTC--CC-CCHHHHHHHTSGGGTCCCCEETTEES-SSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH
T ss_pred cCeEEEcCC--CC-CCHHHHHHHHHHHhccCcccCCCccc-cCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcH
Confidence 356664432 12 368999999888865 3223322222 2233333 445588999999763 38889999
Q ss_pred HHHHHHHHhhcCCCCEEEEeCcccHHHHH--------HHHhcC--CeEEEec------CCCHHHHHHHHHhhchhcccCC
Q psy15447 151 STSASAIAAYVKRNDAVFVDENINFAIQT--------GLIASR--CKVQYFK------HNNMQHLEELLRQQDERDTLNS 214 (457)
Q Consensus 151 ~a~~~ai~a~~~~gd~v~~~~~~h~~~~~--------~~~~~g--~~~~~~~------~~d~~~le~~l~~~~~~~~~~~ 214 (457)
+++..++.+++++||.|++..+.|++... ++...| ...+.++ ..|++++++.+.+.
T Consensus 121 ~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~-------- 192 (483)
T 1rv3_A 121 PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLF-------- 192 (483)
T ss_dssp HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHH--------
T ss_pred HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhhc--------
Confidence 99999899999999999999988876542 223333 3445542 24899999999742
Q ss_pred CCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCc
Q psy15447 215 KVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSV 293 (457)
Q Consensus 215 ~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~ 293 (457)
++++|++ ++.|++ .+.|+++|+++|++||++||+|++|+.|.... +. .. ..+ ..+|+++.|+||+| |+.
T Consensus 193 --~tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~-~~--~~-~p~--~~~div~~s~~K~l~Gpr 262 (483)
T 1rv3_A 193 --HPKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVA-GV--VP-SPF--EHCHVVTTTTHKTLRGCR 262 (483)
T ss_dssp --CCSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHH-TS--SC-CGG--GTCSEEEEESSGGGCCCS
T ss_pred --CCcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhccccc-CC--CC-CCC--CCCcEEEecCcccCCCCC
Confidence 3457777 777776 88999999999999999999999998765421 11 00 001 14589999999999 677
Q ss_pred ccEEEecHH---------------HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHh
Q psy15447 294 GGFCVGSSY---------------IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLL 356 (457)
Q Consensus 294 gG~v~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L 356 (457)
||+++++++ +.+.+.....+.. .++.+....++..++++.+.. .+++.++++++++++.+.|
T Consensus 263 gG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~-~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L 341 (483)
T 1rv3_A 263 AGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGL-QGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAAL 341 (483)
T ss_dssp CEEEEEECSBCC-------CCBCCHHHHHHHHHTTTT-CCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcc-cCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHH
Confidence 899988864 3333332211111 233444444555566665532 2457888999999999999
Q ss_pred hcccccCCeEEeccC-CCCeEEEEecC-CcchHHHHHHHHHHHHHHHHcCeeEe----ccccCccccCCCCCeEEEEecC
Q psy15447 357 SQHKVTQRFLVQGHR-DTPLKYLYLQK-SDDEVASKKLLQTICDMCIQAGFAIT----CPSHLDQEAKKQKPSIRITCNI 430 (457)
Q Consensus 357 ~~~~~~~~~~~~~~~-~~~~~~i~~~~-~~~~~~~~~~~~~~~~~l~~~Gi~v~----~~~~~~~~~~~~~~~lRi~~~~ 430 (457)
++ .|+.+..+. .++++++.+.. .. ...++.+.|.++||.+. ++..+ +...+.+||+++.
T Consensus 342 ~~----~g~~~~~~~~~~~~~~v~~~~~g~-------~~~~~~~~L~~~gI~v~~~~~pg~~~----~~~~~~iRis~~~ 406 (483)
T 1rv3_A 342 VE----LGYKIVTGGSDNHLILVDLRSKGT-------DGGRAEKVLEACSIACNKNTCPGDKS----ALRPSGLRLGTPA 406 (483)
T ss_dssp HH----TTCEEGGGSCSSSEEEEEGGGGTC-------CHHHHHHHHHHTTEECEEECCSSCSC----TTSCCEEEEECHH
T ss_pred Hh----cCCEeccCCCCCceEEEeccCCCC-------CHHHHHHHHHhCCcEEecCCCCCCCc----CCCCceEEeecCC
Confidence 98 488876543 34567776643 11 23457778888999998 53311 1235789999987
Q ss_pred CCC----HHHHHHHHHHHHHHHHH
Q psy15447 431 SHT----EQDMNSLIETLCKSHDI 450 (457)
Q Consensus 431 ~~t----~edi~~~~~~l~~~~~~ 450 (457)
.+| ++|+++++++|+++++.
T Consensus 407 ~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 407 LTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHh
Confidence 666 99999999999998876
No 196
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.94 E-value=3.1e-25 Score=219.15 Aligned_cols=287 Identities=12% Similarity=0.111 Sum_probs=208.4
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHH-----hcCCeEEEecCCCHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLI-----ASRCKVQYFKHNNMQ 197 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~-----~~g~~~~~~~~~d~~ 197 (457)
.++...+|+++|+++.|.+.+++++||++|+.. +.+++++||.|++..+.|++....+. ..|.++..++.+|++
T Consensus 65 ~~p~~~~l~~~la~l~g~~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~ 143 (400)
T 3nmy_A 65 HNPTRFAYERCVAALEGGTRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLTDPA 143 (400)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTTSHH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCCCHH
Confidence 567889999999999999999999999999987 56688999999999999987665543 358999999999999
Q ss_pred HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCC
Q psy15447 198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTE 277 (457)
Q Consensus 198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~ 277 (457)
++++.+++ ++++|++|+++|++|.+.|+++|+++|++||+++|+||+|+.+.+.. . ..+
T Consensus 144 ~l~~~i~~-----------~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~---~--~~~----- 202 (400)
T 3nmy_A 144 AFKAAIRA-----------DTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQR---P--LSL----- 202 (400)
T ss_dssp HHHHHCCT-----------TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCC---G--GGG-----
T ss_pred HHHHHhcc-----------CCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCC---h--hhc-----
Confidence 99988753 56899999999999999999999999999999999999997554321 1 112
Q ss_pred CccEEEecCcccccCc----cc--EEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q psy15447 278 EVDMIIGSLEHALGSV----GG--FCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNT 351 (457)
Q Consensus 278 ~~Di~~~s~sK~lg~~----gG--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~ 351 (457)
++|+++.|++|++|+. || ++..++++++.++.... .++..++|..++.++..++.+. .++++..+++.+
T Consensus 203 g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~--~~g~~~~~~~a~~~l~~l~~l~---~r~~~~~~~a~~ 277 (400)
T 3nmy_A 203 GADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQN--SIGGVQGPFDSFLALRGLKTLP---LRMRAHCENALA 277 (400)
T ss_dssp TCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHH--HHCCBCCHHHHHHHHHHHTTHH---HHHHHHHHHHHH
T ss_pred CCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHH--hcCCCCCHHHHHHHHHhHhHHH---HHHHHHHHHHHH
Confidence 3589999999999743 56 45557778777764432 3344568888888877766553 367888899999
Q ss_pred HHHHhhcccccCCeEEec-----------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc--
Q psy15447 352 MHSLLSQHKVTQRFLVQG-----------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH-- 412 (457)
Q Consensus 352 l~~~L~~~~~~~~~~~~~-----------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-- 412 (457)
+.+.|++ .+.+..+. ...+.++++.++.+. ....++.+.|.-.++.+..+..
T Consensus 278 l~~~L~~---~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~------~~~~~~~~~l~~~~~~~s~G~~~s 348 (400)
T 3nmy_A 278 LAQWLET---HPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGF------DAAKRFCEKTELFTLAESLGGVES 348 (400)
T ss_dssp HHHHHTT---CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH------HHHHHHHHHCSSSEECSCCCSSSC
T ss_pred HHHHHHc---CCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcH------HHHHHHHHcCCcceEecCCCCCcc
Confidence 9999987 34443221 123678999886532 1345666666543433332221
Q ss_pred ----Ccc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447 413 ----LDQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLC 445 (457)
Q Consensus 413 ----~~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 445 (457)
|.. .....++.+|+++....+++.++.+.++|+
T Consensus 349 l~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle~~~dli~dl~~al~ 397 (400)
T 3nmy_A 349 LVNHPAVMTHASIPVARREQLGISDALVRLSVGIEDLGDLRGDLERALV 397 (400)
T ss_dssp EEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred eeeCccccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHHh
Confidence 111 011236789999988766665555554443
No 197
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.94 E-value=7.8e-26 Score=224.10 Aligned_cols=329 Identities=10% Similarity=-0.011 Sum_probs=209.9
Q ss_pred eeEEeecCCccCCCCChh----hHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEE--ecccH
Q psy15447 81 PCINFATHNYLSFVENPD----IEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETAL--YSFGF 150 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~----i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~--~~sG~ 150 (457)
..|||+.+.|++...+|. +.+++.+.+...+ ..++....|..+..+.+++.+.+..| .+++++ +++|+
T Consensus 29 ~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~ 106 (401)
T 7aat_A 29 KKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKM--DKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGT 106 (401)
T ss_dssp TCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTC--CCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHH
T ss_pred CceeeeeeeEECCCCCEechHHHHHHHHHhccccc--ccCCCCCCCCHHHHHHHHHHhcCCCccccccCceEEEecCcch
Confidence 479999988877765555 5555555544322 22222234444555555554444333 456655 78888
Q ss_pred HHHHHHHHhhc---CCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEE
Q psy15447 151 STSASAIAAYV---KRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKF 220 (457)
Q Consensus 151 ~a~~~ai~a~~---~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~ 220 (457)
+|+..++.++. ++||.|++..++|..+...++..|.++..++.. |++.+++.+++.. +++++
T Consensus 107 ~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--------~~~~~ 178 (401)
T 7aat_A 107 GSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIP--------EKSII 178 (401)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSC--------TTCEE
T ss_pred HHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhCC--------CCcEE
Confidence 99998876654 899999999999999999999999988877643 6788888886532 45688
Q ss_pred EEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCC--C-ccccccCCCCCCccEEEecCcccccCcc
Q psy15447 221 IIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTG--H-GVTEYFGVSTEEVDMIIGSLEHALGSVG 294 (457)
Q Consensus 221 vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g--~-~~~~~~~~~~~~~Di~~~s~sK~lg~~g 294 (457)
+++++++||+|.+.+ +++|.++|++||+++|+||+|....++... . .+....+. ...+|+++|+||.+|..|
T Consensus 179 v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~sK~~~~~G 256 (401)
T 7aat_A 179 LLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQ--GIDVVLSQSYAKNMGLYG 256 (401)
T ss_dssp EEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHT--TCCCEEEEECTTTSCCGG
T ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhc--CCcEEEEecCCccccccc
Confidence 999999999998877 778999999999999999998754443210 0 01111111 123588999999998777
Q ss_pred ---cEEEe---cHH----HHHHHHhhCCcceecCCCcHHHHHHHHHHHHH-------HhhCcHHHHHHHHHHHHHHHHhh
Q psy15447 295 ---GFCVG---SSY----IIEHHRLSGSGYCFSASLPPFLAVAANKALHL-------LKANPSLLTKLREKCNTMHSLLS 357 (457)
Q Consensus 295 ---G~v~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~-------~~~~~~~~~~l~~~~~~l~~~L~ 357 (457)
||++. +++ +.+.+...... .+.+.+...++++...++. .+..++.+++++++++++.+.|+
T Consensus 257 ~RiG~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 334 (401)
T 7aat_A 257 ERAGAFTVICRDAEEAKRVESQLKILIRP--MYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLK 334 (401)
T ss_dssp GCEEEEEEECSSHHHHHHHHHHHHHHHHH--HHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEeCCHHHHHHHHHHHHHHHHh--ccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88664 555 33333322111 1222344444444333321 12223567888899999999998
Q ss_pred cccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHH
Q psy15447 358 QHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDM 437 (457)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi 437 (457)
++....++.+..+..+.+.++.+. ...+...+.++||++.+ .+||+++. +|+++|
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ll~~~gi~v~~-------------~~Ris~~~-~~~~~i 389 (401)
T 7aat_A 335 KEGSSHNWQHITDQIGMFCFTGLK-----------PEQVERLTKEFSIYMTK-------------DGRISVAG-VASSNV 389 (401)
T ss_dssp HTTCCSCCHHHHHCCSSEEECCCC-----------HHHHHHHHHHHCEECCT-------------TCEEEGGG-CCTTTH
T ss_pred hcCCCCCCceecCCcceEEecCCC-----------HHHHHHHHHhCCEeccC-------------CCeEEecc-CChhhH
Confidence 721112244433444555544321 12233334567998753 37999875 456669
Q ss_pred HHHHHHHHHHH
Q psy15447 438 NSLIETLCKSH 448 (457)
Q Consensus 438 ~~~~~~l~~~~ 448 (457)
++++++|++++
T Consensus 390 ~~~~~~l~~~~ 400 (401)
T 7aat_A 390 GYLAHAIHQVT 400 (401)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998875
No 198
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.94 E-value=1.8e-25 Score=226.29 Aligned_cols=318 Identities=11% Similarity=0.061 Sum_probs=224.4
Q ss_pred ChhhHHHHHHHHHhcCCCCCCCC-CcccChHHHHHHHHHHHhhcCCCcEEEe-cccHHHHHHHHHhh----cCCCC----
Q psy15447 96 NPDIEKCAIDCIDKNGVGSCGPR-GFYGTNVVHLDLENDIASFMGLEETALY-SFGFSTSASAIAAY----VKRND---- 165 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~~~~~-~~~g~~~~~~~l~~~la~~~g~~~~i~~-~sG~~a~~~ai~a~----~~~gd---- 165 (457)
+|++.+++.+++..| .+..+. ...|..+...++++.+++++|.+..+++ ++|++|+..++.++ .++||
T Consensus 79 ~p~v~~~~~~~~~~~--~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r 156 (474)
T 1wyu_B 79 NPKLHEEAARLFADL--HPYQDPRTAQGALRLMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRTR 156 (474)
T ss_dssp CCHHHHHHHHTTSSC--CTTSCGGGCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHHHHHTTCTTTC
T ss_pred CHHHHHHHHHHHHhc--CCCCchhhChHHHHHHHHHHHHHHHHHCCCceeecChHHHHHHHHHHHHHHHHHHhcCCccCC
Confidence 588888777653222 121111 2456678899999999999998876544 77888988876654 35776
Q ss_pred -EEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC-CChHH
Q psy15447 166 -AVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI-CPLKD 238 (457)
Q Consensus 166 -~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i-~~l~~ 238 (457)
.|++..++|+++...+...|.+++.++.+ |+++|++.+.+ ++++|+++++ |++|.+ .++++
T Consensus 157 ~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~~~~~d~~~L~~~i~~-----------~t~~v~~~~p-n~~G~~~~~l~~ 224 (474)
T 1wyu_B 157 RVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVDLEALKRELGP-----------HVAALMLTNP-NTLGLFERRILE 224 (474)
T ss_dssp CEEEEETTSCTHHHHHHHHTTCEEEEECBCTTSSBCHHHHHHHCST-----------TEEEEEECSS-CTTSCCCTTHHH
T ss_pred CEEEEeCCcChhhHHHHHHCCCEEEEecCCCCCCcCHHHHHHhhCC-----------CceEEEEECC-CCCcccCCCHHH
Confidence 89999999999999999999999988865 88999888743 4578888886 579988 69999
Q ss_pred HHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc-------ccEEEecHHHHHHHHhh-
Q psy15447 239 ILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV-------GGFCVGSSYIIEHHRLS- 310 (457)
Q Consensus 239 i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~-------gG~v~~~~~~~~~~~~~- 310 (457)
|+++|++||+++|+||+|+.+.+|.. ....+ ++|+++.|+||+++.+ .|++++++++++.+...
T Consensus 225 i~~l~~~~g~~li~Dea~~~~~~g~~---~~~~~-----g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~ 296 (474)
T 1wyu_B 225 ISRLCKEAGVQLYYDGANLNAIMGWA---RPGDM-----GFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPL 296 (474)
T ss_dssp HHHHHHHHTCEEEEEGGGGGGTTTTC---CHHHH-----TCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCE
T ss_pred HHHHHHHcCCEEEEeCchhhhhccCC---CcccC-----CCcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCe
Confidence 99999999999999999987665421 11122 3489999999999643 48899998877655310
Q ss_pred ----CCccee------------cCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-
Q psy15447 311 ----GSGYCF------------SASLPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR- 371 (457)
Q Consensus 311 ----~~~~~~------------~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~- 371 (457)
+..+.+ +...+++.++++.+.++.+.. ..+..+++.++++++.+.|++ .|+++....
T Consensus 297 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~ 372 (474)
T 1wyu_B 297 VERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKE----KGYRVPYDGP 372 (474)
T ss_dssp EEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTCBCSSCSS
T ss_pred eeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----cCcEecCCCC
Confidence 001111 112466777777777664322 234578888999999999988 366653222
Q ss_pred CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 372 DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 372 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
....+++.+.... ...++.++|.++||.+....++ ....+.+|++++..+|++|+++++++|++++++
T Consensus 373 ~~~~~~~~~~~~~-------~~~~l~~~L~~~Gi~~~~~~~~----~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 373 SMHEFVAQPPEGF-------RALDLAKGLLELGFHPPTVYFP----LIVKEALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp CCSCEEEBCSTTC-------CHHHHHHHHHHTTCCCCEESCS----TTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred cceEEEEEcCCCC-------CHHHHHHHHHHCCccccccccc----cccCCEEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 1121444442222 3567999999999986332222 112578999999989999999999999988754
No 199
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.94 E-value=6.6e-25 Score=217.36 Aligned_cols=289 Identities=12% Similarity=0.125 Sum_probs=210.3
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHHH
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQHL 199 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~l 199 (457)
++...+|++.+++++|.+..+++++|++|+..++. ++++||.|++..+.|+++...+ +..|.++..++.+|++++
T Consensus 66 ~p~~~~l~~~la~~~g~~~~i~~~sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l 144 (403)
T 3cog_A 66 NPTRNCLEKAVAALDGAKYCLAFASGLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLL 144 (403)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTTSHHHH
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCCCHHHH
Confidence 46678999999999999889999999999999999 8899999999999998765543 457899999999899999
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcC-cEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQ-ARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g-~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~ 278 (457)
++.++ +++++|++++++||+|.+.|+++|.++|++|| +++|+||+|+.+.+.. . .+ .+
T Consensus 145 ~~~i~-----------~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~---~----~~---~~ 203 (403)
T 3cog_A 145 EAAIT-----------PETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQR---P----LA---LG 203 (403)
T ss_dssp HHHCC-----------TTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCC---T----TT---TT
T ss_pred HHhcC-----------cCCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCC---c----cc---cC
Confidence 88874 25678999999999999999999999999999 9999999998765421 1 11 24
Q ss_pred ccEEEecCcccccCc----ccEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447 279 VDMIIGSLEHALGSV----GGFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH 353 (457)
Q Consensus 279 ~Di~~~s~sK~lg~~----gG~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~ 353 (457)
.|+++.|++|++|+. +|+++++ +++++.++.... .++...+|+.++++.++++.+. .++++..++...+.
T Consensus 204 ~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~--~~g~~~~~~~~~~~~~~l~~l~---~r~~~~~~n~~~l~ 278 (403)
T 3cog_A 204 ADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQN--SLGAVPSPIDCYLCNRGLKTLH---VRMEKHFKNGMAVA 278 (403)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHH--HHCCCCCHHHHHHHHHHHTTHH---HHHHHHHHHHHHHH
T ss_pred CeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHH--hcCCCCCHHHHHHHHhhhhHHH---HHHHHHHHHHHHHH
Confidence 589999999999753 4898884 788777764332 2344568888887777765442 35566667777776
Q ss_pred HHhhccc-----------ccCCeEEecc---CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecc---c-----
Q psy15447 354 SLLSQHK-----------VTQRFLVQGH---RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCP---S----- 411 (457)
Q Consensus 354 ~~L~~~~-----------~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~---~----- 411 (457)
+.|++.. ..+++.+..+ ..+.++.+.++... .++.+.+.+.|+.+... .
T Consensus 279 ~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~~~---------~~~~~~l~~~~i~~~~~s~G~~~sl~ 349 (403)
T 3cog_A 279 QFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTL---------QHAEIFLKNLKLFTLAESLGGFESLA 349 (403)
T ss_dssp HHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCH---------HHHHHHHHHCSSSEECSCCSSSSCEE
T ss_pred HHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecCCH---------HHHHHHHHhCCcceEccCCCCcceee
Confidence 6665521 1123332211 23778888776431 23445566678865432 1
Q ss_pred -cCccc------------cCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 412 -HLDQE------------AKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 412 -~~~~~------------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
+|... ....++.+|++++...++++++.+.++|++++
T Consensus 350 ~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~~~ 399 (403)
T 3cog_A 350 ELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAAH 399 (403)
T ss_dssp ECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHHC
T ss_pred ecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHHhh
Confidence 22110 01225799999999888888888888877654
No 200
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.94 E-value=4.9e-26 Score=222.10 Aligned_cols=321 Identities=11% Similarity=0.065 Sum_probs=219.7
Q ss_pred eeeEEeecCCccCCCCChhhHHHHHHHHHhcC-CCCCCC---CCcccChHHHHHHHHHHHhhcCCC---cEEEeccc-HH
Q psy15447 80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNG-VGSCGP---RGFYGTNVVHLDLENDIASFMGLE---ETALYSFG-FS 151 (457)
Q Consensus 80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~-~~~~~~---~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG-~~ 151 (457)
++++++..+.+ ..+|.+.+++.+.+.++. .+...+ ...++..+...++++.+++++|.+ .+++++++ ++
T Consensus 2 ~~~~~~~~g~~---~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~ 78 (360)
T 1w23_A 2 KQVFNFNAGPS---ALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASL 78 (360)
T ss_dssp CCCEECCSSSC---CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHH
T ss_pred CceEeecCCCc---CCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchH
Confidence 34556655432 346889999998886541 111100 002344567889999999999975 34555555 78
Q ss_pred HHHHHHHhhcCC---CCEEEEeCcccHHHHHHHHhcCCeEEEecC------CCHHHHHH-HHHhhchhcccCCCCccEEE
Q psy15447 152 TSASAIAAYVKR---NDAVFVDENINFAIQTGLIASRCKVQYFKH------NNMQHLEE-LLRQQDERDTLNSKVTKKFI 221 (457)
Q Consensus 152 a~~~ai~a~~~~---gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~-~l~~~~~~~~~~~~~~~~~v 221 (457)
|+..++.++..+ +|.|+.+.+.|.+.. .+...| +++.++. .|++++++ .+. +++++|
T Consensus 79 al~~~~~~l~~~~~~g~~vi~~~~~~~~~~-~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~-----------~~~k~v 145 (360)
T 1w23_A 79 QFTMLPMNLLTKGTIGNYVLTGSWSEKALK-EAKLLG-ETHIAASTKANSYQSIPDFSEFQLN-----------ENDAYL 145 (360)
T ss_dssp HHHHHHHHHCCTTCEEEEEECSHHHHHHHH-HHHTTS-EEEEEEECGGGTSCSCCCGGGCCCC-----------TTEEEE
T ss_pred HHHHHHHHhcCCCCcccEEEecchhHHHHH-HHHHhC-CeEEeecccccCcCCccchHhhccC-----------CCCCEE
Confidence 999988888754 667777777776643 345667 8777653 35555655 431 356788
Q ss_pred EEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEec
Q psy15447 222 IVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGS 300 (457)
Q Consensus 222 i~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~ 300 (457)
++++++|++|.+.| +|+++||+++|+||+|+.|... .++ ...|+++.|+||++|+.| |+++++
T Consensus 146 ~~~~~~nptG~~~~-----~i~~~~~~~li~D~a~~~~~~~---------~~~--~~~di~~~s~sK~~~~~G~G~~~~~ 209 (360)
T 1w23_A 146 HITSNNTIYGTQYQ-----NFPEINHAPLIADMSSDILSRP---------LKV--NQFGMIYAGAQKNLGPSGVTVVIVK 209 (360)
T ss_dssp EEESEETTTTEECS-----SCCCCCSSCEEEECTTTTTSSC---------CCG--GGCSEEEEETTTTTSCTTCEEEEEE
T ss_pred EEeCCCCCcceecc-----cccccCCceEEEechhhcCCCC---------cCc--ccCCEEEEEcccccCCCCcEEEEEc
Confidence 88999999999976 3444899999999999875321 111 122799999999998767 999999
Q ss_pred HHHHHHHHhhCC-----------cceecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCe-
Q psy15447 301 SYIIEHHRLSGS-----------GYCFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRF- 365 (457)
Q Consensus 301 ~~~~~~~~~~~~-----------~~~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~- 365 (457)
+++++.++.... ++.+ ++.+...++++.++++.+.+. ++++++++++.+++.+.|++ .+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~ 285 (360)
T 1w23_A 210 KDLLNTKVEQVPTMLQYATHIKSDSLY-NTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDE---SNGFY 285 (360)
T ss_dssp HHHHCSCCTTCCGGGCHHHHHHTTTCS-SCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT---TTTSS
T ss_pred HHHHhhcccCCcchhhhhhhhhccCCC-CCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH---ccCcc
Confidence 887765533211 1111 234666666777778776543 45788899999999999988 3334
Q ss_pred EEe--ccCC-CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHH
Q psy15447 366 LVQ--GHRD-TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIE 442 (457)
Q Consensus 366 ~~~--~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~ 442 (457)
... .... +.++++.+++.. ...++.++|.++||.+.++.. ..+++|++++..+|++|++++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~gi~~~~~~~-------~~~~iRis~~~~~~~~~i~~~~~ 351 (360)
T 1w23_A 286 VGHAEKGSRSLMNVTFNLRNEE-------LNQQFLAKAKEQGFVGLNGHR-------SVGGCRASIYNAVPIDACIALRE 351 (360)
T ss_dssp EESSCGGGBCSSEEEEECSSHH-------HHHHHHHHHHHTTEESCBCCT-------TTCSEEEECCTTSCHHHHHHHHH
T ss_pred cccCCchhccCcEEEEEcCCCc-------cHHHHHHHHHHCCeeeecCCC-------CCCeEEEEecCCCCHHHHHHHHH
Confidence 432 1112 347888775422 456788889999999865431 14789999998899999999999
Q ss_pred HHHHHHHH
Q psy15447 443 TLCKSHDI 450 (457)
Q Consensus 443 ~l~~~~~~ 450 (457)
+|++++++
T Consensus 352 ~l~~~~~~ 359 (360)
T 1w23_A 352 LMIQFKEN 359 (360)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 99998765
No 201
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.94 E-value=1.4e-25 Score=229.99 Aligned_cols=338 Identities=10% Similarity=-0.007 Sum_probs=222.5
Q ss_pred eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-------CcEEEecccHHHH
Q psy15447 81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-------EETALYSFGFSTS 153 (457)
Q Consensus 81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~~~sG~~a~ 153 (457)
.++||+.+.+ ++. +|++.+++.+++..... . ....|..+....+++.+.+..+. +.++++++|++|+
T Consensus 104 ~~i~l~~g~~-~~~-~~~~v~a~~~~~~~~~y--~--~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al 177 (533)
T 3f6t_A 104 DAVNYCHTEL-GLN-RDKVVAEWVNGAVANNY--P--VPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAI 177 (533)
T ss_dssp HHHHHHHHTT-CCC-HHHHHHHHHHHHHTCSC--C--SSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHH
T ss_pred hheeccCCCC-CcC-CcHHHHHHHHHHHhCCC--C--CCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHH
Confidence 4677776655 443 68888888888875321 1 11235566666677766555232 4567777888999
Q ss_pred HHHHHh-----hcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC---------CHHHHHHHHHhhchhcccCCCCccE
Q psy15447 154 ASAIAA-----YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN---------NMQHLEELLRQQDERDTLNSKVTKK 219 (457)
Q Consensus 154 ~~ai~a-----~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~---------d~~~le~~l~~~~~~~~~~~~~~~~ 219 (457)
..++.+ ++++||.|+++.++|.++...+...|..+..++.+ |++++++.+. ++++
T Consensus 178 ~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~-----------~~~k 246 (533)
T 3f6t_A 178 VYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKD-----------PSIK 246 (533)
T ss_dssp HHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSC-----------TTEE
T ss_pred HHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhC-----------CCCe
Confidence 999987 78999999999999999998888888888877653 6888888763 2457
Q ss_pred EEEEecCCCCCCCCCChH---HHHHHHH-HcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-
Q psy15447 220 FIIVEGVYMNSADICPLK---DILSLRS-KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG- 294 (457)
Q Consensus 220 ~vi~e~v~~~~G~i~~l~---~i~~l~~-~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g- 294 (457)
+|++++++||+|.+.|.+ +|+++|+ +||+++|+||+|+....+ +..+.. ..+ +.+++++||||.+|..|
T Consensus 247 ~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~--~~~~~~---~~~-~~~i~~~S~SK~~g~~G~ 320 (533)
T 3f6t_A 247 ALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPN--FKSIYS---VVP-YNTMLVYSYSKLFGCTGW 320 (533)
T ss_dssp EEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTT--CCCHHH---HSG-GGEEEEEESHHHHTCGGG
T ss_pred EEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccC--ccCHhh---cCC-CCEEEEecCcccCCCccc
Confidence 777778999999999865 8888888 689999999999754332 222211 112 34699999999998777
Q ss_pred --cEEEecHH-----HHHHH--------------------------------HhhCCcceecCCCcHHHHHHHHHHHHHH
Q psy15447 295 --GFCVGSSY-----IIEHH--------------------------------RLSGSGYCFSASLPPFLAVAANKALHLL 335 (457)
Q Consensus 295 --G~v~~~~~-----~~~~~--------------------------------~~~~~~~~~~~~~~~~~~aaa~a~l~~~ 335 (457)
||++++++ +++.+ +. ...+.+++..++...++++.++..+
T Consensus 321 RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~-~~~~~~~~~~~~~q~a~a~~a~~~L 399 (533)
T 3f6t_A 321 RLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRS-IGLYHTAGLSTPQQIMEALFSMTHL 399 (533)
T ss_dssp CEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTT-TTTGGGCSCCHHHHHHHHHHHHHHH
T ss_pred ceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHH-HHHhcccCCChHHHHHHHHHHHHHH
Confidence 99988765 33321 11 1122222222333333332233333
Q ss_pred h----------hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHH-----HHHHHHH
Q psy15447 336 K----------ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VAS-----KKLLQTI 396 (457)
Q Consensus 336 ~----------~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~-----~~~~~~~ 396 (457)
. ..++++++++++.+++.+.|. .++.+..+..+.++++.+..-... +.. .....++
T Consensus 400 ~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-----~~~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~ 474 (533)
T 3f6t_A 400 LTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-----APKDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDF 474 (533)
T ss_dssp TTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-----CCCCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHH
T ss_pred hhhccccchHHHHHHHHHHHHHHHHHHHHhcC-----CCccccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHH
Confidence 2 113466778888888888885 234444344566666665420000 000 0012345
Q ss_pred HHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 397 CDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 397 ~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
+..++ ++||++.++..+.. +.+++|+++.. ++++++++++++|++++++..
T Consensus 475 ~~~ll~~~GV~v~pg~~f~~----~~~~iRls~a~-~~~e~i~~~i~~L~~~l~~~~ 526 (533)
T 3f6t_A 475 LLKLAEKNGVVLVDGVGFGA----KPGELRVSQAN-LPTEDYALIGKQVLELLKEYY 526 (533)
T ss_dssp HHHHHHHTTSSSCTTEEECS----STTEEEEESSS-SCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCEEEeCCcccCC----CCCEEEEEEee-CCHHHHHHHHHHHHHHHHHHH
Confidence 55555 67999998776532 35799999843 789999999999999988764
No 202
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.94 E-value=1.8e-25 Score=224.82 Aligned_cols=333 Identities=11% Similarity=0.027 Sum_probs=221.0
Q ss_pred CCee-eEEeecCCccCCCCChhhHHHHHHHHHhcC----CCCCCCCCcccChHHHHHHHHHHHhhc-CC-------CcEE
Q psy15447 78 NGIP-CINFATHNYLSFVENPDIEKCAIDCIDKNG----VGSCGPRGFYGTNVVHLDLENDIASFM-GL-------EETA 144 (457)
Q Consensus 78 ~G~~-~id~~s~~~l~~~~~p~i~~a~~~~l~~~~----~~~~~~~~~~g~~~~~~~l~~~la~~~-g~-------~~~i 144 (457)
|+++ .|||+.+.|+++.+++.+.+++.+++.+.. .....+....| ..++++.+++++ |. ++++
T Consensus 46 ~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G----~~~lr~~ia~~l~g~~~~~~~~~~i~ 121 (448)
T 3meb_A 46 DTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAG----FPLFLEAAQFLMFGKDSKAAQEGRIA 121 (448)
T ss_dssp CCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTC----CHHHHHHHHHHHHCTTCHHHHTTCEE
T ss_pred CCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcc----hHHHHHHHHHHhcCCCccccCcCcEE
Confidence 4544 699999999888877777777777744321 22222222233 356677777765 64 3567
Q ss_pred E--ecccHHHHHH--HHHhhcCCCCEEEEeCcccHHHHHHHH----hcCCeEEEecC---C-----CHHHHHHHHHhhch
Q psy15447 145 L--YSFGFSTSAS--AIAAYVKRNDAVFVDENINFAIQTGLI----ASRCKVQYFKH---N-----NMQHLEELLRQQDE 208 (457)
Q Consensus 145 ~--~~sG~~a~~~--ai~a~~~~gd~v~~~~~~h~~~~~~~~----~~g~~~~~~~~---~-----d~~~le~~l~~~~~ 208 (457)
+ +++|++|+.. .+.+++.+||.|+++.++|..+...+. ..|.++..++. + |++++++.+++..
T Consensus 122 ~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~- 200 (448)
T 3meb_A 122 SCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAP- 200 (448)
T ss_dssp EEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSC-
T ss_pred EEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCC-
Confidence 7 8888999876 456678899999999999999998888 88988887765 2 7888988887532
Q ss_pred hcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCC--CCcccccc-CCCCCCccEE
Q psy15447 209 RDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGST--GHGVTEYF-GVSTEEVDMI 282 (457)
Q Consensus 209 ~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~--g~~~~~~~-~~~~~~~Di~ 282 (457)
.+++++++.+++||+|.+.+ +++|.++|++||+++|+||+|+...++.. .......+ +.. ...++
T Consensus 201 -------~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~--~~~i~ 271 (448)
T 3meb_A 201 -------EKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAG--VEVLV 271 (448)
T ss_dssp -------TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTT--CCEEE
T ss_pred -------CCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcC--CcEEE
Confidence 34678888999999999988 55699999999999999999875444320 00111111 111 22588
Q ss_pred EecCcccccCcc---cEE--Ee---------cH----HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH-------hh
Q psy15447 283 IGSLEHALGSVG---GFC--VG---------SS----YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL-------KA 337 (457)
Q Consensus 283 ~~s~sK~lg~~g---G~v--~~---------~~----~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~-------~~ 337 (457)
+.|+||.+|..| ||+ ++ ++ .+++.+..... ..++ +.+.+.++++.+.++.. +.
T Consensus 272 ~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~-~~~~~~~~a~~~~l~~~~l~~~~~~~ 349 (448)
T 3meb_A 272 AQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIR-KTWS-MSAIHGAYIVQVIVHDKRLLQMFYDN 349 (448)
T ss_dssp EEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHH-TTTS-SCCHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred EecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHh-cccC-CccHHHHHHHHHHhcChHHHHHHHHH
Confidence 999999998766 886 55 45 55555543211 1121 24556655555554321 12
Q ss_pred CcHHHHHHHHHHHHHHHHhhcccccCC------eEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHH-HHcCeeEecc
Q psy15447 338 NPSLLTKLREKCNTMHSLLSQHKVTQR------FLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMC-IQAGFAITCP 410 (457)
Q Consensus 338 ~~~~~~~l~~~~~~l~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~ 410 (457)
.++++++++++++++.+.|+++. .++ +.+..+..+.+.+..+. .+++..| .++||++.++
T Consensus 350 ~~~~~~~~~~~r~~l~~~L~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~ll~~~gV~v~~G 416 (448)
T 3meb_A 350 VKEMSARIHRMRSLLHASLAKRK-TPGPGSKGTWDHILTAIGMFTFTGLT------------PEHVDYLKEKWSIYLVKA 416 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT-CCCSTTTCCCTHHHHCCSSEEECCCC------------HHHHHHHHHHHCEEECSG
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC-CCCcCcccccceeCCCceEEEecCCC------------HHHHHHHHHhCCEEEeCC
Confidence 24567888899999999998721 123 33333344554443331 1345555 4569999764
Q ss_pred ccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 411 SHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 411 ~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
. .||++. .+++++|++++++|+++++.+.
T Consensus 417 ~------------gRis~a-~~~~~~i~~~~~~l~~~l~~~~ 445 (448)
T 3meb_A 417 G------------GRMSMC-GLTESNCDYVAEAIHDAVTKLP 445 (448)
T ss_dssp G------------GEEEGG-GCCTTTHHHHHHHHHHHHHHSC
T ss_pred C------------cEEEEe-cCCHHHHHHHHHHHHHHHHhcc
Confidence 2 389885 3577889999999999987543
No 203
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.94 E-value=5.7e-25 Score=219.22 Aligned_cols=289 Identities=13% Similarity=0.072 Sum_probs=207.8
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEe-cCCCHH
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYF-KHNNMQ 197 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~-~~~d~~ 197 (457)
..+...++++++++++|.+.++++++|++|+..++++++++||.|++..+.|.++...+ ...|.++..+ +.+|++
T Consensus 56 ~~~~~~~l~~~la~~~g~~~~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~ 135 (421)
T 2ctz_A 56 MNPTVDVLEKRLAALEGGKAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREERPE 135 (421)
T ss_dssp BCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTCCHH
T ss_pred CChHHHHHHHHHHHHhCCCceEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCCHH
Confidence 45778999999999999988999999999999999999999999999999998877765 6779999999 888999
Q ss_pred HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCc-ccccccCCCCccccccCCCC
Q psy15447 198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESV-SFGTLGSTGHGVTEYFGVST 276 (457)
Q Consensus 198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~-~~g~~g~~g~~~~~~~~~~~ 276 (457)
++++.+++ ++++|++++++|++|.+.|+++|+++|++||+++|+||+| ++|..+ ..+ +
T Consensus 136 ~l~~~i~~-----------~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~---~~~----~--- 194 (421)
T 2ctz_A 136 EFLALTDE-----------KTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLL---RPL----A--- 194 (421)
T ss_dssp HHHHHCCT-----------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSC---CGG----G---
T ss_pred HHHHhhcc-----------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccccC---Ccc----c---
Confidence 99988753 5678999999999999999999999999999999999999 776432 211 2
Q ss_pred CCccEEEecCcccccCc----ccEEEec--HHH----HHHHHhh---CC---------------------cceecCCCcH
Q psy15447 277 EEVDMIIGSLEHALGSV----GGFCVGS--SYI----IEHHRLS---GS---------------------GYCFSASLPP 322 (457)
Q Consensus 277 ~~~Di~~~s~sK~lg~~----gG~v~~~--~~~----~~~~~~~---~~---------------------~~~~~~~~~~ 322 (457)
.++|+++.|++|++|+. ||+++.+ .++ .+.++.. .+ ...++..++|
T Consensus 195 ~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~ 274 (421)
T 2ctz_A 195 WGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGP 274 (421)
T ss_dssp GTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCH
T ss_pred cCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCH
Confidence 13489999999999753 4555552 111 1222110 00 0123446789
Q ss_pred HHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec------------------cCCCCeEEEEecCCc
Q psy15447 323 FLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG------------------HRDTPLKYLYLQKSD 384 (457)
Q Consensus 323 ~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~------------------~~~~~~~~i~~~~~~ 384 (457)
+.+++++..++.+. .+.++..++.+++.+.|++ .+++.... ...++++.+.+.+..
T Consensus 275 ~~a~~~~~~l~~l~---~r~~~~~~~a~~l~~~L~~---~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~~ 348 (421)
T 2ctz_A 275 FEAWVVLLGMETLS---LRAERHVENTLHLAHWLLE---QPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGY 348 (421)
T ss_dssp HHHHHHHHHHTTHH---HHHHHHHHHHHHHHHHHHT---CTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTHH
T ss_pred HHHHHHHcCcchHH---HHHHHHHHhHHHHHHHHHh---CCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCCH
Confidence 88888877776553 3566777899999999988 56776542 234778888886521
Q ss_pred chHHHHHHHHHHHHHHHHcCeeEeccc------cCcc----c--------cCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 385 DEVASKKLLQTICDMCIQAGFAITCPS------HLDQ----E--------AKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 385 ~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~~~----~--------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
.....+.+.+...++.++.+. +|.. . ....++.+|++++. +|+|++++.|++
T Consensus 349 ------~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~----e~~~~li~~l~~ 418 (421)
T 2ctz_A 349 ------EAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL----EHVEDLKAELKE 418 (421)
T ss_dssp ------HHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS----SCHHHHHHHHHH
T ss_pred ------HHHHHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHH
Confidence 134556666654455444331 1111 0 01124799999875 466666776666
Q ss_pred HH
Q psy15447 447 SH 448 (457)
Q Consensus 447 ~~ 448 (457)
++
T Consensus 419 al 420 (421)
T 2ctz_A 419 AL 420 (421)
T ss_dssp HT
T ss_pred Hh
Confidence 54
No 204
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.94 E-value=4.7e-24 Score=210.58 Aligned_cols=305 Identities=14% Similarity=0.110 Sum_probs=221.1
Q ss_pred ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-------cCCCCEEE
Q psy15447 96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-------VKRNDAVF 168 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-------~~~gd~v~ 168 (457)
+|++.+++.+++++.. +...+...++++.+++++|.+.++++++|++|+..++.++ .++||.|+
T Consensus 14 ~~~~~~a~~~~~~~~~---------~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi 84 (390)
T 3b8x_A 14 DDLEYKAIQSVLDSKM---------FTMGEYVKQYETQFAKTFGSKYAVMVSSGSTANLLMIAALFFTKKPRLKKGDEII 84 (390)
T ss_dssp CHHHHHHHHHHHHHTC---------CSSCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEE
T ss_pred CHHHHHHHHHHHHcCC---------CCCChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEE
Confidence 5889999999987621 1235678999999999999999999999999999999998 78899999
Q ss_pred EeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHH
Q psy15447 169 VDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSL 242 (457)
Q Consensus 169 ~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l 242 (457)
++.+.|.++...+...|.++..++.+ |++++++.+++ ++++|++.+ +.|...|+++|.++
T Consensus 85 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-----------~~~~v~~~~---~~g~~~~~~~i~~l 150 (390)
T 3b8x_A 85 VPAVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTD-----------STKAILTVN---LLGNPNNFDEINKI 150 (390)
T ss_dssp EESSSCHHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCT-----------TEEEEEEEC---GGGCCCCHHHHHHH
T ss_pred ECCCCcHHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhCc-----------CCeEEEEEC---CccChhhHHHHHHH
Confidence 99999999999999999998887754 78888887743 345666643 45778999999999
Q ss_pred HHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecC--ccccc-CcccEEEecH-HHHHHHHhhC-Cc----
Q psy15447 243 RSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSL--EHALG-SVGGFCVGSS-YIIEHHRLSG-SG---- 313 (457)
Q Consensus 243 ~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~--sK~lg-~~gG~v~~~~-~~~~~~~~~~-~~---- 313 (457)
|++||+++|+||+|++|... .+ ..+|..+ |+...|+ +|.++ +.||++++++ ++.+.++... .+
T Consensus 151 ~~~~~~~li~D~a~~~g~~~-~~----~~~g~~~---~~~~~s~~~~k~~~~g~gG~~~~~~~~l~~~~~~~~~~g~~~~ 222 (390)
T 3b8x_A 151 IGGRDIILLEDNCESMGATF-NN----KCAGTFG---LMGTFSSFYSNHIATMEGGCIVTDDEEIYHILLCIRAHGWTRN 222 (390)
T ss_dssp HTTSCCEEEEECTTCTTCEE-TT----EETTSSS---SEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTBSTT
T ss_pred HHHcCCEEEEECcCcccCEE-CC----ccccccc---ceEEEEccCCCCCccCCceEEEeCCHHHHHHHHHHHhcCCCcc
Confidence 99999999999999976543 22 2344432 4554333 45553 4578888875 6655543211 11
Q ss_pred -------------------c-----eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec
Q psy15447 314 -------------------Y-----CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG 369 (457)
Q Consensus 314 -------------------~-----~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~ 369 (457)
+ .+...++++.++++++.++.++ +..++.+++.+++.+.|++ ++++.+..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~---~~~~~~~~~~~~l~~~L~~---~~~~~~~~ 296 (390)
T 3b8x_A 223 LPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQLKKLP---RFISVRRKNAEYFLDKFKD---HPYLDVQQ 296 (390)
T ss_dssp SCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTT---CSSEEECC
T ss_pred ccccccccccccccccccccceeccccccCcCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcC---CCCcccCC
Confidence 0 1222368888888888877664 4778889999999999988 56777754
Q ss_pred cC-CC--CeEEEEecC--CcchHHHHHHHHHHHHHHHHcCeeEeccccCcc-cc-C--C----------------CCCeE
Q psy15447 370 HR-DT--PLKYLYLQK--SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-EA-K--K----------------QKPSI 424 (457)
Q Consensus 370 ~~-~~--~~~~i~~~~--~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-~~-~--~----------------~~~~l 424 (457)
+. .. ..+++.+.. .. ...++.+.|.++||.+++...+.. .. + . ....+
T Consensus 297 ~~~~~~~~~~~i~~~~~~~~-------~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 369 (390)
T 3b8x_A 297 ETGESSWFGFSFIIKKDSGV-------IRKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGL 369 (390)
T ss_dssp CCSBCCCCEEEEEECTTSCC-------CHHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEE
T ss_pred CCCCcccEEEEEEecCcCcc-------cHHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEE
Confidence 32 22 235556653 12 345788999999999886322110 01 0 0 01369
Q ss_pred EEEecCCCCHHHHHHHHHHH
Q psy15447 425 RITCNISHTEQDMNSLIETL 444 (457)
Q Consensus 425 Ri~~~~~~t~edi~~~~~~l 444 (457)
|++++..+|++|+++++++|
T Consensus 370 ~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 370 FVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp EEECCSSCCHHHHHHHHHHT
T ss_pred EeeCCCCCCHHHHHHHHHhh
Confidence 99999999999999999886
No 205
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.94 E-value=2.5e-24 Score=219.48 Aligned_cols=312 Identities=14% Similarity=0.131 Sum_probs=213.6
Q ss_pred ChHHHHHHHHHHHhhcCCC----cEEEecccHHHHHHHHHhhcC--------------CCCEEEEeCcccHHHHHHHHhc
Q psy15447 123 TNVVHLDLENDIASFMGLE----ETALYSFGFSTSASAIAAYVK--------------RNDAVFVDENINFAIQTGLIAS 184 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~~ai~a~~~--------------~gd~v~~~~~~h~~~~~~~~~~ 184 (457)
..+...++.+.+++++|.+ ..+++++|++|+..++.++.. +++.|+++...|.++.++++..
T Consensus 133 ~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~~~~~ 212 (511)
T 3vp6_A 133 FVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAAL 212 (511)
T ss_dssp HHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHHHHHHHc
Confidence 3445555666777778865 567888999999988877654 5678999999999999999999
Q ss_pred CC---eEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCc
Q psy15447 185 RC---KVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESV 256 (457)
Q Consensus 185 g~---~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~ 256 (457)
|. +++.++.+ |+++|++.|++.... ...+++|+++.+++++|.+.|+++|.++|++||+++++|++|
T Consensus 213 g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~-----g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~ 287 (511)
T 3vp6_A 213 GFGTDNVILIKCNERGKIIPADFEAKILEAKQK-----GYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAW 287 (511)
T ss_dssp TSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHT-----TCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETT
T ss_pred CCCCCcEEEeecCCCCccCHHHHHHHHHHHHhc-----CCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccc
Confidence 87 78888765 899999999764321 123678999999999999999999999999999999999999
Q ss_pred ccccccC-CCCccccccCCCCCCccEEEecCcccccCc--ccEE-EecHHHHHHHHhhCCcceecC--------------
Q psy15447 257 SFGTLGS-TGHGVTEYFGVSTEEVDMIIGSLEHALGSV--GGFC-VGSSYIIEHHRLSGSGYCFSA-------------- 318 (457)
Q Consensus 257 ~~g~~g~-~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~--gG~v-~~~~~~~~~~~~~~~~~~~~~-------------- 318 (457)
+.|.+.. ..+. ...|+ .++|+++.+.+|+++.+ .|++ +.++............|.+..
T Consensus 288 ~~~~~~~~~~~~--~~~g~--~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 363 (511)
T 3vp6_A 288 GGGLLMSRKHRH--KLNGI--ERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKA 363 (511)
T ss_dssp GGGGGGCTTTGG--GGTTG--GGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGS
T ss_pred hhhHhhChhhhh--hccCC--ccCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCC
Confidence 8876522 1111 11233 35699999999999643 2444 445555555432222222211
Q ss_pred -----CCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec--cCCCCeEEEEecCCc------c
Q psy15447 319 -----SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG--HRDTPLKYLYLQKSD------D 385 (457)
Q Consensus 319 -----~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~--~~~~~~~~i~~~~~~------~ 385 (457)
....+.+.+++..+.. +..+++.++..++++++.+.|++ .+|+++.. ++..+++.+.+.... +
T Consensus 364 ~~~~r~~~al~~~~al~~~g~-~gl~~~~~~~~~~a~~l~~~L~~---~pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~~ 439 (511)
T 3vp6_A 364 IQCGRHVDIFKFWLMWKAKGT-VGFENQINKCLELAEYLYAKIKN---REEFEMVFNGEPEHTNVCFWYIPQSLRGVPDS 439 (511)
T ss_dssp SCSSCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHS---CTTEEESSSSCCSSSCEEEEECCGGGSSCCCC
T ss_pred CCCCCchHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHhc---CCCEEEEecCCCCeEEEEEEEeCccccccccc
Confidence 1233444444443321 12246788999999999999988 57999876 356677766553211 0
Q ss_pred -h--HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe-cCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 386 -E--VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC-NISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 386 -~--~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
. ........++.+.|.++|+++..... . ....+++|+++ +..+|++||++++++|+++.+.+
T Consensus 440 ~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~--~--~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~~~ 505 (511)
T 3vp6_A 440 PQRREKLHKVAPKIKALMMESGTTMVGYQP--Q--GDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 505 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCEEEEEE--E--TTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCEEEEEEE--e--CCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 0 01112345789999999976543211 0 11234799999 78899999999999999887654
No 206
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.94 E-value=3.3e-25 Score=216.55 Aligned_cols=307 Identities=10% Similarity=0.059 Sum_probs=213.5
Q ss_pred CChhhHHHHHHHHHhcCCCCCCC-----CCcccChHHHHHHHHHHHhhcCCC---cEEEe-cccHHHHHHHHHhhcCCCC
Q psy15447 95 ENPDIEKCAIDCIDKNGVGSCGP-----RGFYGTNVVHLDLENDIASFMGLE---ETALY-SFGFSTSASAIAAYVKRND 165 (457)
Q Consensus 95 ~~p~i~~a~~~~l~~~~~~~~~~-----~~~~g~~~~~~~l~~~la~~~g~~---~~i~~-~sG~~a~~~ai~a~~~~gd 165 (457)
.+|++++++.+.+.++. +.+.+ .......+..+++++++++++|.+ +++++ ++|++++..++.+++++||
T Consensus 15 ~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l~~~gd 93 (362)
T 2c0r_A 15 LPLEVLERAQAEFVDYQ-HTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLKEGQ 93 (362)
T ss_dssp CCHHHHHHHHHTSSSST-TSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCCTTC
T ss_pred CCHHHHHHHHHHHhhhh-hcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhcCCCCC
Confidence 46899999999887642 11111 011123456789999999999976 44555 6788999999999999999
Q ss_pred EEEEeCcccHHH--HHHHHhcCCeEEEecCC---------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC-
Q psy15447 166 AVFVDENINFAI--QTGLIASRCKVQYFKHN---------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI- 233 (457)
Q Consensus 166 ~v~~~~~~h~~~--~~~~~~~g~~~~~~~~~---------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i- 233 (457)
.|++....|... ...++..| ++..++.+ |.++++ + . +++++|++.+++|++|.+
T Consensus 94 ~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i---~--------~~t~~v~~~~~~n~tG~~~ 159 (362)
T 2c0r_A 94 TANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--L---Q--------DNAAYLHLTSNETIEGAQF 159 (362)
T ss_dssp EEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--C---C--------TTEEEEEEESEETTTTEEC
T ss_pred eEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--c---C--------CCcCEEEEeCCcCccceec
Confidence 887665443332 34455567 77665432 222221 1 1 356888888889999995
Q ss_pred CChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhhCC
Q psy15447 234 CPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLSGS 312 (457)
Q Consensus 234 ~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~~~ 312 (457)
.|+++| ||+++|+||+|++|... .++ .+.|+++.|+||++|+.| ||+++++++++.+.....
T Consensus 160 ~~l~~i------~~~~vivD~a~~~~~~~---------~~~--~~~d~~~~s~~K~~g~~G~G~l~~~~~~~~~l~~~~~ 222 (362)
T 2c0r_A 160 KAFPDT------GSVPLIGDMSSDILSRP---------FDL--NQFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLP 222 (362)
T ss_dssp SSCCCC------TTSCEEEECTTTTTSSC---------CCG--GGCSEEEEETTTTTCCSSCEEEEEEGGGSSSCCTTSC
T ss_pred cccccc------CCCEEEEEChhhccCCc---------cch--hHCcEEEEeccccccCcCcEEEEEcHHHHhhccccCc
Confidence 777776 89999999999876321 122 223899999999999777 999999887665532110
Q ss_pred cc----------eecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCC-e-EEecc---CCCC
Q psy15447 313 GY----------CFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQR-F-LVQGH---RDTP 374 (457)
Q Consensus 313 ~~----------~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~-~-~~~~~---~~~~ 374 (457)
.+ ...++.++...+++.++++.+.+. ++++++++++++++.+.|++ .+ + ++..+ ....
T Consensus 223 ~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~ 298 (362)
T 2c0r_A 223 TMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQ----SGGFYRGCVDVDSRSDM 298 (362)
T ss_dssp GGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT----STTSSEESSCGGGBCSS
T ss_pred hHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH----cCCccccCCChHHcCCc
Confidence 00 112345777778888888876553 56788999999999999988 34 5 55321 2345
Q ss_pred eEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 375 LKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 375 ~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
++++.++... ...++++.|.++||.+.++.. ..+.+|+++...+|++|+++++++|+++++..
T Consensus 299 ~~~~~~~~~~-------~~~~~~~~L~~~gi~~~~g~~-------~~~~iRis~~~~~~~e~i~~l~~~l~~~~~~~ 361 (362)
T 2c0r_A 299 NITFRLASEE-------LEKEFVKASEQEGFVGLKGHR-------SVGGLRASIYNAVPYESCEALVQFMEHFKRSR 361 (362)
T ss_dssp EEEEECSCHH-------HHHHHHHHHHHTTEESCBCCT-------TTCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCcc-------hHHHHHHHHHHCCCeeccCCC-------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 6777665422 456789999999997765431 13579999998899999999999999987653
No 207
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.94 E-value=2e-24 Score=217.43 Aligned_cols=329 Identities=10% Similarity=0.020 Sum_probs=225.1
Q ss_pred CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc-------EEEecccHHHHHHHHHhhcC-----
Q psy15447 95 ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE-------TALYSFGFSTSASAIAAYVK----- 162 (457)
Q Consensus 95 ~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~-------~i~~~sG~~a~~~ai~a~~~----- 162 (457)
.+|.+.+++.+.+.+....+. ...+..+...++.+.+++++|.+. ++++++|++|+..++.++..
T Consensus 54 ~~~~v~e~~~~a~~~~~~~~~---~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~ 130 (452)
T 2dgk_A 54 DDENVHKLMDLSINKNWIDKE---EYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKR 130 (452)
T ss_dssp CCHHHHHHHHHTTTCBTTCTT---TCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHhccCCCChh---hChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 468888888888765332221 223456677888888999999652 67888999999999887653
Q ss_pred ---CC-----CEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447 163 ---RN-----DAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM 228 (457)
Q Consensus 163 ---~g-----d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~ 228 (457)
+| +.|++.. +|.++...++..|.+++.++.+ |+++|++.+.+ ++++|++..+++
T Consensus 131 ~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~-----------~t~~v~~~~~~n 198 (452)
T 2dgk_A 131 MEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDE-----------NTIGVVPTFGVT 198 (452)
T ss_dssp HHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCCT-----------TEEEEECBBSCT
T ss_pred HHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCCCCCeECHHHHHHHHhh-----------CCEEEEEEcCCc
Confidence 44 5888888 9999999999999999888753 78888888753 457888888989
Q ss_pred CCCCCCChHHHHHHHHHc------CcEEEEEcCcccccc---cCCCCccccccCCCCCCccEEEecCccccc-C-cccEE
Q psy15447 229 NSADICPLKDILSLRSKY------QARIFVDESVSFGTL---GSTGHGVTEYFGVSTEEVDMIIGSLEHALG-S-VGGFC 297 (457)
Q Consensus 229 ~~G~i~~l~~i~~l~~~~------g~~li~DEa~~~g~~---g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~-~gG~v 297 (457)
++|.+.|+++|.++|++| |+++++|++|+.+.. ..... +.....++|+++.+.+|.+. + ..|++
T Consensus 199 ~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-----~~~~~~~~d~~~~~~hK~~~~~~~~G~~ 273 (452)
T 2dgk_A 199 YTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIV-----WDFRLPRVKSISASGHKFGLAPLGCGWV 273 (452)
T ss_dssp TTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCC-----CSTTSTTEEEEEEETTTTTCCCSSCEEE
T ss_pred CCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccch-----hhcCCCCCcEEEECcccccCCCCCeEEE
Confidence 999999999999999996 999999999987643 21111 11222467999999999763 2 34787
Q ss_pred EecH-HHH-HHHHhhCCcce------e--cCCCcHHHHHHHHHHHHHHh--hCcHHHHHHHHHHHHHHHHhhcccccCCe
Q psy15447 298 VGSS-YII-EHHRLSGSGYC------F--SASLPPFLAVAANKALHLLK--ANPSLLTKLREKCNTMHSLLSQHKVTQRF 365 (457)
Q Consensus 298 ~~~~-~~~-~~~~~~~~~~~------~--~~~~~~~~~aaa~a~l~~~~--~~~~~~~~l~~~~~~l~~~L~~~~~~~~~ 365 (457)
+.++ ..+ +.+... ..|. + ..+.+.....+..++++.+. ...++.++..++++++.+.|++ .+++
T Consensus 274 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~---~~~~ 349 (452)
T 2dgk_A 274 IWRDEEALPQELVFN-VDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAK---LGPY 349 (452)
T ss_dssp EESSGGGSCGGGCEE-ECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TSSE
T ss_pred EEcCHHHHHHHhccC-ccccCCCCCCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh---CCCe
Confidence 7754 332 332111 1111 1 11212112222223333332 1245678888999999999988 4578
Q ss_pred EEecc----CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHH
Q psy15447 366 LVQGH----RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLI 441 (457)
Q Consensus 366 ~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~ 441 (457)
++..+ +..+++.+.++..... .....++.+.|.++|+.++....|.. ......+|+++...+|++|+++++
T Consensus 350 ~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~l~~~L~~~Gi~v~~~~~~~~--~~~~~~lRis~~~~~t~e~id~li 424 (452)
T 2dgk_A 350 EFICTGRPDEGIPAVCFKLKDGEDP---GYTLYDLSERLRLRGWQVPAFTLGGE--ATDIVVMRIMCRRGFEMDFAELLL 424 (452)
T ss_dssp EEEEECCTTTBSSEEEEEECTTCCC---SCCHHHHHHHHHHTTCBCCEEECSTT--CTTCEEEEEECCTTCCHHHHHHHH
T ss_pred EEecCCCCCCCeEEEEEEecCcccc---cCCHHHHHHHHHhcCCeeeeeeCCcc--cCCeEEEEEEecCCCCHHHHHHHH
Confidence 87644 3567788877642100 00235789999999997654322211 123468999999999999999999
Q ss_pred HHHHHHHHHhc
Q psy15447 442 ETLCKSHDIAV 452 (457)
Q Consensus 442 ~~l~~~~~~~~ 452 (457)
++|+++++.+.
T Consensus 425 ~~l~~~~~~~~ 435 (452)
T 2dgk_A 425 EDYKASLKYLS 435 (452)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999887664
No 208
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.93 E-value=1.5e-24 Score=218.09 Aligned_cols=289 Identities=13% Similarity=0.160 Sum_probs=205.2
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHHH
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQHL 199 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~l 199 (457)
.+...++++++++++|.+.++++++|++|+..++. ++++||.|++..+.|.++... +...|.++..++.+|++++
T Consensus 132 ~~~~~~l~~~la~~~g~~~~i~~~sGt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l 210 (464)
T 1ibj_A 132 NPTRDALESLLAKLDKADRAFCFTSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEV 210 (464)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHH
Confidence 45789999999999999999999999999988875 789999999999999887653 4566889999999999999
Q ss_pred HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447 200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV 279 (457)
Q Consensus 200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~ 279 (457)
++.++ +++++|++++++||+|.+.|+++|+++|++||+++|+||+|+.|... .. .+ + ++
T Consensus 211 ~~~i~-----------~~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~---~~-~~-~-----~~ 269 (464)
T 1ibj_A 211 AAAIG-----------PQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLS---RP-LE-L-----GA 269 (464)
T ss_dssp HHHCC-----------SSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTC---CG-GG-T-----TC
T ss_pred HHHhc-----------cCceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccC---Ch-hh-c-----CC
Confidence 88874 35689999999999999999999999999999999999999764321 11 11 2 35
Q ss_pred cEEEecCcccccC----cccEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447 280 DMIIGSLEHALGS----VGGFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS 354 (457)
Q Consensus 280 Di~~~s~sK~lg~----~gG~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~ 354 (457)
|+++.|++|++++ .+|+++++ +++++.++... ..++.+.+++.++++.++++.+. ...++..++...+.+
T Consensus 270 div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~--~~~g~~~~~~~~~a~~~al~~~~---~r~~~~~~~~~~l~~ 344 (464)
T 1ibj_A 270 DIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQ--NSEGSGLAPFDCWLCLRGIKTMA---LRIEKQQENARKIAM 344 (464)
T ss_dssp SEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHH--HHTTCBCCHHHHHHHHHHHTTHH---HHHHHHHHHHHHHHH
T ss_pred EEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHH--HhcCCCCCHHHHHHHHhchhhHH---HHHHHHHHHHHHHHH
Confidence 8999999999964 34888888 47777765432 11233457888877777765332 123333333344434
Q ss_pred Hhhcc-----------cccCCeEEeccC---CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc------Cc
Q psy15447 355 LLSQH-----------KVTQRFLVQGHR---DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH------LD 414 (457)
Q Consensus 355 ~L~~~-----------~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------~~ 414 (457)
.|++. ..++++.+..+. .+.++++.+++.. ...++.+.|...||.++.+.. |.
T Consensus 345 ~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~~~-------~~~~~~~~L~~~gi~v~~G~~~sl~~~p~ 417 (464)
T 1ibj_A 345 YLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVA-------LSKHLVETTKYFSIAVSFGSVKSLISMPC 417 (464)
T ss_dssp HHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSCHH-------HHHHHHHHCSSSEECSCCCSSSCEEECTT
T ss_pred HHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECCHH-------HHHHHHHhcCcceEeecCCCCceeeeccc
Confidence 44331 112344443221 3568888874311 234577887777888776541 10
Q ss_pred ------c------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 415 ------Q------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 415 ------~------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
. .....++.+|++++. ||++++++.|+++++.
T Consensus 418 ~~~~~~~~~~~~~~~g~~~~~iRlsvg~----edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 418 FMSHASIPAEVREARGLTEDLVRISAGI----EDVDDLISDLDIAFKT 461 (464)
T ss_dssp TTTTCSCCSSSSSSSSCCTTCEEEECCS----SCHHHHHHHHHHHHHS
T ss_pred ccccccCCHHHHHhcCCCcCeEEEEeCC----CCHHHHHHHHHHHHhh
Confidence 0 001125789999986 8999999999998764
No 209
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.93 E-value=1.3e-23 Score=212.92 Aligned_cols=305 Identities=13% Similarity=0.141 Sum_probs=212.1
Q ss_pred ChHHHHHHHHHHHhhcCCC------------cEEEecccHHHHHHHHHhhcC-------------------CCCEEEEeC
Q psy15447 123 TNVVHLDLENDIASFMGLE------------ETALYSFGFSTSASAIAAYVK-------------------RNDAVFVDE 171 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~------------~~i~~~sG~~a~~~ai~a~~~-------------------~gd~v~~~~ 171 (457)
..++..++.+.+++++|.+ ..+++++|++||..++.+.+. +++.|+++.
T Consensus 116 ~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~ 195 (481)
T 4e1o_A 116 CTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASD 195 (481)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEET
T ss_pred HHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcC
Confidence 3445555555667777765 347888999999988876532 467899999
Q ss_pred cccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc
Q psy15447 172 NINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY 246 (457)
Q Consensus 172 ~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~ 246 (457)
..|.++.+++++.|.+++.++.+ |+++|++.|++.... ...+.+|+.....+++|.+.|+++|.++|++|
T Consensus 196 ~~H~s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~-----g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~ 270 (481)
T 4e1o_A 196 QAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQR-----GLVPVFVCATLGTTGVCAFDCLSELGPICARE 270 (481)
T ss_dssp TSCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHT-----TCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHH
T ss_pred cchHHHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhC-----CCCcEEEEEecCCCCCcCcCCHHHHHHHHHHc
Confidence 99999999999999999988864 899999999764321 12246677888888999999999999999999
Q ss_pred CcEEEEEcCcccccc-cCCCCccccccCCCCCCccEEEecCcccccCc---ccEEEecHHHHHHHHhhCCcceec-----
Q psy15447 247 QARIFVDESVSFGTL-GSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV---GGFCVGSSYIIEHHRLSGSGYCFS----- 317 (457)
Q Consensus 247 g~~li~DEa~~~g~~-g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~---gG~v~~~~~~~~~~~~~~~~~~~~----- 317 (457)
|+++++|++|+.+.+ ++..+.. ..|+ ..+|.++.+.||+++.+ |++++.++............|.+.
T Consensus 271 ~~~lhvDaA~g~~~~~~~~~~~~--~~gi--~~aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~ 346 (481)
T 4e1o_A 271 GLWLHIDAAYAGTAFLCPEFRGF--LKGI--EYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANSGV 346 (481)
T ss_dssp TCEEEEECTTGGGGGGSGGGGGG--GTTG--GGCSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGCCTTTTT
T ss_pred CCeEEeehhhHHHHHhChhhHHH--hcCc--ccCCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhccCcccCC
Confidence 999999999987643 2212211 1233 34589999999999743 234455555433211111112111
Q ss_pred ----------C--CCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc
Q psy15447 318 ----------A--SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD 385 (457)
Q Consensus 318 ----------~--~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 385 (457)
. ....+.+.+++..+.. +..+++.++..++++++.+.|++ .+++++..++..+++++.+....
T Consensus 347 ~~~~~~~~~~~~r~~~~l~~~~al~~~g~-~g~~~~~~~~~~~a~~l~~~L~~---~~g~~~~~~~~~~~v~f~~~~~~- 421 (481)
T 4e1o_A 347 ATDFMHWQIPLSRRFRSVKLWFVIRSFGV-KNLQAHVRHGTEMAKYFESLVRN---DPSFEIPAKRHLGLVVFRLKGPN- 421 (481)
T ss_dssp SCCGGGGSSSSCCCCTHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT---CTTEECCSCCCSSEEEEEESSCH-
T ss_pred CCCcccccccCCCCccHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHhc---CCCeEEecCCceeEEEEEeCCch-
Confidence 1 1234444444444321 12245778889999999999998 57999876677888888876432
Q ss_pred hHHHHHHHHHHHHHHHHcCee-EeccccCccccCCCCCeEEEEecCC-CCHHHHHHHHHHHHHHHHHhc
Q psy15447 386 EVASKKLLQTICDMCIQAGFA-ITCPSHLDQEAKKQKPSIRITCNIS-HTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 386 ~~~~~~~~~~~~~~l~~~Gi~-v~~~~~~~~~~~~~~~~lRi~~~~~-~t~edi~~~~~~l~~~~~~~~ 452 (457)
....++.++|.++|+. +.+.. ..+..++|+++... .|++||++++++|+++.+++.
T Consensus 422 -----~~~~~l~~~L~~~g~~~~~~~~------~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~l~ 479 (481)
T 4e1o_A 422 -----SLTENVLKEIAKAGRLFLIPAT------IQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLIL 479 (481)
T ss_dssp -----HHHHHHHHHHHHHCSSBCEEEE------ETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHhCCeEEEEeeE------ECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 1456889999999844 33322 22346899997644 489999999999999988764
No 210
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.93 E-value=1.7e-24 Score=213.77 Aligned_cols=250 Identities=12% Similarity=0.110 Sum_probs=188.9
Q ss_pred HHHHHHHHHHhhcCCCcEEE---ecccHHHHHHHHHhhcCCCCEEEEeC-cccHHHHH----------HHHhcCCeEEEe
Q psy15447 126 VHLDLENDIASFMGLEETAL---YSFGFSTSASAIAAYVKRNDAVFVDE-NINFAIQT----------GLIASRCKVQYF 191 (457)
Q Consensus 126 ~~~~l~~~la~~~g~~~~i~---~~sG~~a~~~ai~a~~~~gd~v~~~~-~~h~~~~~----------~~~~~g~~~~~~ 191 (457)
.+.+|++.+|+++|.+.+++ ++||++|+..++.+++++||.|+++. +.|..+.. .++..|.++..+
T Consensus 60 ~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v 139 (409)
T 3jzl_A 60 GRDTLERVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSV 139 (409)
T ss_dssp HHHHHHHHHHHHHTCSEEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEEC
T ss_pred HHHHHHHHHHHHhCCCcEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEe
Confidence 47889999999999999888 88999999999999999999999997 77777664 334568888888
Q ss_pred cC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEec----CCCCCCCCCChHHHHHHHHH--cCcEEEEEcCccccc
Q psy15447 192 KH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEG----VYMNSADICPLKDILSLRSK--YQARIFVDESVSFGT 260 (457)
Q Consensus 192 ~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~----v~~~~G~i~~l~~i~~l~~~--~g~~li~DEa~~~g~ 260 (457)
+. .|++++++.++ +++++|++++ ++|++|.+.++++|.++|++ ||+++|+||+|+.+.
T Consensus 140 ~~~~~g~~d~e~l~~ai~-----------~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~ 208 (409)
T 3jzl_A 140 PLLENGDVDFPRIAKKMT-----------PKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFV 208 (409)
T ss_dssp CCCTTSCCCHHHHHHHCC-----------TTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTT
T ss_pred CCCCCCCcCHHHHHHhcc-----------CCCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCccccc
Confidence 87 68999988874 3568999999 99999999999999999999 999999999998665
Q ss_pred ccCCCCccccccCCCCCCccEEEecCcccccC----cccEEEecHHHHHHHHhhC--CcceecCCCcHHHHHHHHHHHHH
Q psy15447 261 LGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSG--SGYCFSASLPPFLAVAANKALHL 334 (457)
Q Consensus 261 ~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aaa~a~l~~ 334 (457)
++... . ..++|++++|++|++|+ .||++++++++++.++... .......+..+..+.+++..++.
T Consensus 209 ~~~~p--------~-~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~~ 279 (409)
T 3jzl_A 209 EYQEP--------P-EVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFFL 279 (409)
T ss_dssp SSCCS--------G-GGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHH
T ss_pred ccCCc--------c-ccCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccccccccccHHHHHHHHHHHhh
Confidence 32111 1 12458999999999974 3799999999999987632 21212222222112334444443
Q ss_pred HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCC-----eEEEEecCCcchHHHHHHHHHHHHHHHHc---Cee
Q psy15447 335 LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTP-----LKYLYLQKSDDEVASKKLLQTICDMCIQA---GFA 406 (457)
Q Consensus 335 ~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~l~~~---Gi~ 406 (457)
+ +.++++..+++.++.+.|++ .|+.+. +..++ ++.+.+++.. .+.++++.|++. +.+
T Consensus 280 ~---~~r~~~~~~~a~~la~~L~~----~g~~v~-p~~~~~~~~~i~~i~l~~~~-------~~~~~~~~L~~~~~~~s~ 344 (409)
T 3jzl_A 280 A---PHVTAQAIKGARFTAAMLAE----FGVEAD-PVWDAPRTDLIQSVSFHNKE-------KMVAFAQAIQAASPVNAH 344 (409)
T ss_dssp H---HHHHHHHHHHHHHHHHHHHH----TTCEEE-SCTTSCCSSSCCEEECSCHH-------HHHHHHHHHHHTSSSSTT
T ss_pred H---HHHHHHHHHHHHHHHHHHHh----CCCccc-CCCCCCCccEEEEEEeCCHH-------HHHHHHHHHHhcCccccc
Confidence 3 45788899999999999998 566663 33444 7888887543 677899999987 444
Q ss_pred Eecc
Q psy15447 407 ITCP 410 (457)
Q Consensus 407 v~~~ 410 (457)
+.|.
T Consensus 345 ~~p~ 348 (409)
T 3jzl_A 345 VLPI 348 (409)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 4443
No 211
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.93 E-value=3.5e-24 Score=212.18 Aligned_cols=255 Identities=14% Similarity=0.165 Sum_probs=192.6
Q ss_pred HHHHHHHHHHhhcCCCcEEE---ecccHHHHHHHHHhhcCCCCEEEEeC-cccHHHHH-----------HHHhcCCeEEE
Q psy15447 126 VHLDLENDIASFMGLEETAL---YSFGFSTSASAIAAYVKRNDAVFVDE-NINFAIQT-----------GLIASRCKVQY 190 (457)
Q Consensus 126 ~~~~l~~~la~~~g~~~~i~---~~sG~~a~~~ai~a~~~~gd~v~~~~-~~h~~~~~-----------~~~~~g~~~~~ 190 (457)
.+.+|++.+|+++|.+.+++ ++||++|+..++.+++++||.|+++. +.|..+.. .+...|.++..
T Consensus 74 ~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~ 153 (427)
T 3i16_A 74 GRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQ 153 (427)
T ss_dssp HHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEE
T ss_pred HHHHHHHHHHHHhCCcceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEE
Confidence 47889999999999998888 89999999999999999999999998 77765542 33456888888
Q ss_pred ecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEec----CCCCCCCCCChHHHHHHHHH--cCcEEEEEcCcccc
Q psy15447 191 FKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEG----VYMNSADICPLKDILSLRSK--YQARIFVDESVSFG 259 (457)
Q Consensus 191 ~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~----v~~~~G~i~~l~~i~~l~~~--~g~~li~DEa~~~g 259 (457)
++. .|++++++.+++. +++++|++++ ++|++|.+.++++|+++|++ ||+++++|++|+.+
T Consensus 154 v~~~~~g~~D~e~l~~~l~~~---------~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~ 224 (427)
T 3i16_A 154 VDLKEDGKPNLEEIEKVLKED---------ESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEF 224 (427)
T ss_dssp CCCCTTSSCCHHHHHHHHHTC---------TTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTT
T ss_pred ecCccCCCcCHHHHHHHhhCC---------CCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccc
Confidence 887 5899999998741 2468999999 99999999999999999999 99999999999876
Q ss_pred cccCCCCccccccCCCCCCccEEEecCcccccC----cccEEEecHHHHHHHHhhCCcceecCCCcH-HH-HHHHHHHHH
Q psy15447 260 TLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSGSGYCFSASLPP-FL-AVAANKALH 333 (457)
Q Consensus 260 ~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~aaa~a~l~ 333 (457)
.+.. .. . ..++|++++|++|++|+ .||++++++++++.++.......++....| +. +..++..++
T Consensus 225 ~~~~--~p------~-~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl~ 295 (427)
T 3i16_A 225 MDTK--EP------T-DVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGLF 295 (427)
T ss_dssp SSSS--CG------G-GGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHH
T ss_pred cccC--Cc------c-ccCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCccCccCCccHHHHHHHHHHHH
Confidence 5322 11 1 12458999999999974 579999999999998763222222222222 22 344444444
Q ss_pred HHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCC-----eEEEEecCCcchHHHHHHHHHHHHHHHHc---Ce
Q psy15447 334 LLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTP-----LKYLYLQKSDDEVASKKLLQTICDMCIQA---GF 405 (457)
Q Consensus 334 ~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~l~~~---Gi 405 (457)
.+ +.++++..+++.++.+.|++ .|+.+. +..++ ++.+.+++.. .+.++++.|... +.
T Consensus 296 ~~---~~r~~~~~~~a~~la~~L~~----~g~~V~-p~~~~~~~~~i~~i~l~~~~-------~~~~f~~~l~~~~~~~s 360 (427)
T 3i16_A 296 LA---PHISMEALKGAILCSRIMEL----AGFEVM-PKYDEKRSDIIQSIKFNDKD-------KLIEFCKGIQTGSPIDS 360 (427)
T ss_dssp HH---HHHHHHHHHHHHHHHHHHHH----TTCEEE-SCTTSCCSSSCEEEECSSHH-------HHHHHHHHHHHTCSSST
T ss_pred HH---HHHHHHHHHHHHHHHHHHHh----CCCeec-CCCCCCCccEEEEEEECCHH-------HHHHHHHHHhhcCcccc
Confidence 33 45788999999999999998 566663 44555 8888887544 677899999886 55
Q ss_pred eEeccccC
Q psy15447 406 AITCPSHL 413 (457)
Q Consensus 406 ~v~~~~~~ 413 (457)
++.|..++
T Consensus 361 ~~~p~~~~ 368 (427)
T 3i16_A 361 FVSCEPWD 368 (427)
T ss_dssp TSCCCCBC
T ss_pred cccCcCCC
Confidence 55554443
No 212
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.93 E-value=1.9e-23 Score=205.10 Aligned_cols=319 Identities=12% Similarity=0.082 Sum_probs=222.1
Q ss_pred CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHH-HhhcC-CCcEEEecccHHHHHHHHHhh-cCCCCEEE
Q psy15447 92 SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDI-ASFMG-LEETALYSFGFSTSASAIAAY-VKRNDAVF 168 (457)
Q Consensus 92 ~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~l-a~~~g-~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~ 168 (457)
.+...+++.+++.+.++. +.. +...+...+|++++ |+++| .+.+++++||++|+..++.++ +++||.|+
T Consensus 11 ~~~~~~~i~~a~~~~~~~-~~~-------~~~~~~~~~l~~~~~a~~~g~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi 82 (377)
T 3ju7_A 11 STVPVIEYLDELKEIDAS-HIY-------TNYGPINQRFEQTIMSGFFQNRGAVTTVANATLGLMAAIQLKKRKKGKYAL 82 (377)
T ss_dssp CCCCGGGGHHHHHHHHHH-TCC-------SSSCHHHHHHHHHHHHHTSTTCSEEEEESCHHHHHHHHHHHHSCTTCCEEE
T ss_pred CCCCcHHHHHHHHHHHHc-CCc-------ccCCHHHHHHHHHHHHHHhCCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEE
Confidence 344568899999999876 221 11245678999999 99999 888999999999999999988 89999999
Q ss_pred EeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHH
Q psy15447 169 VDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSL 242 (457)
Q Consensus 169 ~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l 242 (457)
++.+.|.++...+...|.+++.++.+ |++++++.+.... .++++|+ +.+++|.+.++++|.++
T Consensus 83 ~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~--------~~tk~v~---~~~~~G~~~~~~~i~~l 151 (377)
T 3ju7_A 83 MPSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELK--------EEVAIVV---PYATFGSWMNLEEYEEL 151 (377)
T ss_dssp EESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHG--------GGEEEEC---CBCGGGBCCCCHHHHHH
T ss_pred ECCCCcHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCC--------CCceEEE---EECCCCCccCHHHHHHH
Confidence 99999999999999999998887643 8999999884311 1256666 34578999999999999
Q ss_pred HHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecC--cccccC-cccEEEe-cHHHHHHHHhhCC-c----
Q psy15447 243 RSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSL--EHALGS-VGGFCVG-SSYIIEHHRLSGS-G---- 313 (457)
Q Consensus 243 ~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~--sK~lg~-~gG~v~~-~~~~~~~~~~~~~-~---- 313 (457)
|+ ||+++|+|++|++|.... +. ..|- ...|+.+.|| +|.+++ .||+++. ++++.+.++.... +
T Consensus 152 a~-~~~~vi~D~a~a~g~~~~-~~----~~g~--~~~d~~~~S~~~~K~l~~g~gG~~~~~~~~l~~~~~~~~~~g~~~~ 223 (377)
T 3ju7_A 152 EK-KGVPVVVDAAPGFGLMNG-GM----HYGQ--DFSGMIIYSFHATKPFGIGEGGLIYSKNEEDIQRIKRMGNFGFDTN 223 (377)
T ss_dssp HH-TTCCBEEECTTCTTCEET-TE----ETTT--TCSSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHTBTTBCTT
T ss_pred Hh-cCCEEEEECCCccCCeEC-CE----eccC--CCCcEEEEECCCCCcCCCCCcEEEEECCHHHHHHHHHHHhcCCCCC
Confidence 99 999999999999875421 11 1110 0125666665 699964 4577665 5666666653221 1
Q ss_pred -----ceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCe--EEeccC----CCCeEEEEecC
Q psy15447 314 -----YCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRF--LVQGHR----DTPLKYLYLQK 382 (457)
Q Consensus 314 -----~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~--~~~~~~----~~~~~~i~~~~ 382 (457)
..+...++++.++.+++.++.++ +..++.+++.+++.+.|+++ +++ .+.... ...++.+.+++
T Consensus 224 ~~~~~~g~~~~~~~~~aa~~~~~l~~l~---~~~~~~~~~~~~~~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (377)
T 3ju7_A 224 RECTMMGFNCKMSEYAAAIGIATMKKWD---DKLKERTRISEWYKQLLQSN---GLMKKGWQLQKTEAVIQQFMPILCPE 297 (377)
T ss_dssp SCBCSSCCBCCCCHHHHHHHHHHHHTHH---HHHHHHHHHHHHHHHHHHHT---TTTTTTCBCCCCSCBCCSSEEEECCT
T ss_pred CceeeccccCCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcCC---CCccccccCCCCCcceEEEEEEEeCC
Confidence 12334578888888888776554 36778888888888888873 221 111111 11234455544
Q ss_pred CcchHHHHHHHHHHHHHHHHcCeeEeccccC-ccccC--C-------------CCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 383 SDDEVASKKLLQTICDMCIQAGFAITCPSHL-DQEAK--K-------------QKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 383 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~-~~~~~--~-------------~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
.. ...++.+.|.++||.++....+ ....+ . ....+|+.++..+|++|+++++++|++
T Consensus 298 ~~-------~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~ 370 (377)
T 3ju7_A 298 EV-------RNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQ 370 (377)
T ss_dssp TS-------CHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC
T ss_pred hh-------hHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHH
Confidence 22 2567999999999998765422 11000 0 134799999999999999999999987
Q ss_pred HHHH
Q psy15447 447 SHDI 450 (457)
Q Consensus 447 ~~~~ 450 (457)
++..
T Consensus 371 ~~~~ 374 (377)
T 3ju7_A 371 KVVS 374 (377)
T ss_dssp ----
T ss_pred HHhc
Confidence 7654
No 213
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.93 E-value=2.8e-23 Score=210.00 Aligned_cols=304 Identities=10% Similarity=0.044 Sum_probs=207.3
Q ss_pred hHHHHHHHHHHHhhcCCC-----------cEEEecccHHHHHHHHHhhcC-------------------CCCEEEEeCcc
Q psy15447 124 NVVHLDLENDIASFMGLE-----------ETALYSFGFSTSASAIAAYVK-------------------RNDAVFVDENI 173 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~-----------~~i~~~sG~~a~~~ai~a~~~-------------------~gd~v~~~~~~ 173 (457)
.++..++.+.+++++|.+ ..+++++|++||..++.+.+. +++.|+++...
T Consensus 112 ~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~ 191 (475)
T 3k40_A 112 TELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQA 191 (475)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTS
T ss_pred HHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCc
Confidence 344444445567777866 368889999999988876531 24689999999
Q ss_pred cHHHHHHHHhcCCeEEEecC----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcE
Q psy15447 174 NFAIQTGLIASRCKVQYFKH----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR 249 (457)
Q Consensus 174 h~~~~~~~~~~g~~~~~~~~----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~ 249 (457)
|.++.+++++.|.+++.++. .|+++|++.|++.... ...+.+|++....+++|.+.|+++|.++|++||++
T Consensus 192 H~s~~~~~~~~g~~~~~v~~d~~~~d~~~L~~~i~~~~~~-----~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~ 266 (475)
T 3k40_A 192 HSSVERAGLLGGVKLRSVQSENHRMRGAALEKAIEQDVAE-----GLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLW 266 (475)
T ss_dssp CHHHHHHHHHHTCEEEEECCBTTBCCHHHHHHHHHHHHHT-----TCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCE
T ss_pred hHHHHHHHHHcCCceEEEECCCCCcCHHHHHHHHHHHHHC-----CCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCe
Confidence 99999999999999998887 4899999999864321 12245677777788899999999999999999999
Q ss_pred EEEEcCcccccc-cCCCCccccccCCCCCCccEEEecCcccccCc--ccEE-EecHHHH-HHHHhhCCcce---------
Q psy15447 250 IFVDESVSFGTL-GSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV--GGFC-VGSSYII-EHHRLSGSGYC--------- 315 (457)
Q Consensus 250 li~DEa~~~g~~-g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~--gG~v-~~~~~~~-~~~~~~~~~~~--------- 315 (457)
+++|++|+.+.+ ++..+.. ..++ ..+|.++.+.||+++.+ .|++ +.++... +.+.. ...|.
T Consensus 267 lhvD~A~~~~~~~~~~~~~~--~~gi--~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~-~~~yl~~~~~~~~~ 341 (475)
T 3k40_A 267 IHVDAAYAGSAFICPEYRHL--MKGI--ESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNV-DPLYLKHDMQGSAP 341 (475)
T ss_dssp EEEECTTGGGGGGSGGGGGG--GTTG--GGCSEEEECHHHHSSCCSSCEEEEESSGGGC---------------------
T ss_pred EEEeHHhHHHHHhCHhhHHH--hcCc--ccCCEEEECchhccCCCCceEEEEEeCHHHHHHHhcC-CccccCCCcCCCCC
Confidence 999999987643 2211111 1233 24689999999999643 2444 4444332 22211 11111
Q ss_pred ------ecCC--CcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchH
Q psy15447 316 ------FSAS--LPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEV 387 (457)
Q Consensus 316 ------~~~~--~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 387 (457)
...+ ...+.+.+++..+.. +..+++.++..++++++.+.|++ .+++++..++..+++++.+....
T Consensus 342 ~~~~~~~~~sr~~~~l~l~~al~~~g~-~g~~~~~~~~~~~a~~l~~~L~~---~~g~~l~~~~~~~iv~f~~~~~~--- 414 (475)
T 3k40_A 342 DYRHWQIPLGRRFRALKLWFVLRLYGV-ENLQAHIRRHCNFAKQFGDLCVA---DSRFELAAEINMGLVCFRLKGSN--- 414 (475)
T ss_dssp -------CCCGGGTHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH---STTEEESSCCBTTEEEEEESSCH---
T ss_pred CcccccccCCCcccHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHhc---CCCEEEecCCceEEEEEEeCCch---
Confidence 1111 122333333333321 12245778899999999999998 57999876677888888876432
Q ss_pred HHHHHHHHHHHHHHHcCeeE-eccccCccccCCCCCeEEEEecC-CCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 388 ASKKLLQTICDMCIQAGFAI-TCPSHLDQEAKKQKPSIRITCNI-SHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 388 ~~~~~~~~~~~~l~~~Gi~v-~~~~~~~~~~~~~~~~lRi~~~~-~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
....++.++|.++|..+ .+.. ..+..++|+++.. .+|++||++++++|+++.+++..
T Consensus 415 ---~~~~~l~~~L~~~g~~~~~~~~------~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~~~ 473 (475)
T 3k40_A 415 ---ERNEALLKRINGRGHIHLVPAK------IKDVYFLRMAICSRFTQSEDMEYSWKEVSAAADEMEQ 473 (475)
T ss_dssp ---HHHHHHHHHHHHHTSCBCEEEE------ETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHhCCcEEEEeeE------ECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 14568899999988643 3322 2335689999764 45899999999999999887654
No 214
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.93 E-value=3.3e-23 Score=211.38 Aligned_cols=311 Identities=14% Similarity=0.149 Sum_probs=211.7
Q ss_pred hHHHHHHHHHHHhhcCCC----cEEEecccHHHHHHHHHhhcC--------CC-----C-EEEEeCcccHHHHHHHHhcC
Q psy15447 124 NVVHLDLENDIASFMGLE----ETALYSFGFSTSASAIAAYVK--------RN-----D-AVFVDENINFAIQTGLIASR 185 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~~ai~a~~~--------~g-----d-~v~~~~~~h~~~~~~~~~~g 185 (457)
.+...++.+.+++++|.+ ..+++++|++|+..++.++.. +| + .|+++...|.++..++...|
T Consensus 131 ~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g 210 (504)
T 2okj_A 131 VLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALG 210 (504)
T ss_dssp HHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHcC
Confidence 344556667778988865 467888999999999887742 45 6 78889999999999988877
Q ss_pred C---eEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcc
Q psy15447 186 C---KVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVS 257 (457)
Q Consensus 186 ~---~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~ 257 (457)
. +++.++.+ |+++|++.+++.... ..++++|+++.+++++|.+.|+++|.++|++||+++++|++|+
T Consensus 211 ~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~-----g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~ 285 (504)
T 2okj_A 211 FGTDNVILIKCNERGKIIPADFEAKILEAKQK-----GYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWG 285 (504)
T ss_dssp SCGGGEEEECBCTTSCBCHHHHHHHHHHHHHT-----TCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTG
T ss_pred CCcccEEEEecCCCCCCCHHHHHHHHHHHHHC-----CCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhh
Confidence 6 78888765 899999999763221 1246788899999999999999999999999999999999998
Q ss_pred cccccCCCCccccccCCCCCCccEEEecCcccccCc--ccEEEecH-HHHHHHHhhCCcceecC----------------
Q psy15447 258 FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV--GGFCVGSS-YIIEHHRLSGSGYCFSA---------------- 318 (457)
Q Consensus 258 ~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~--gG~v~~~~-~~~~~~~~~~~~~~~~~---------------- 318 (457)
.+.+..... .....++ .++|+++.++||+++.+ .|+++.++ ++++.......++.++.
T Consensus 286 ~~~~~~~~~-~~~~~g~--~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 362 (504)
T 2okj_A 286 GGLLMSRKH-RHKLNGI--ERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQ 362 (504)
T ss_dssp GGGGGCTTT-GGGGTTG--GGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSC
T ss_pred hHHHhCHhh-HhhcCCc--ccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCC
Confidence 776532110 0111223 25689999999999732 47777665 45554322222232211
Q ss_pred ---CCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec--cCCCCeEEEEecCCc------chH
Q psy15447 319 ---SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG--HRDTPLKYLYLQKSD------DEV 387 (457)
Q Consensus 319 ---~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~--~~~~~~~~i~~~~~~------~~~ 387 (457)
...++.++++++++.. +...++.++..++++++.+.|++ .+++++.. ++...++.+...... ..+
T Consensus 363 ~~rr~~~l~~~a~l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~---~~~~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~ 438 (504)
T 2okj_A 363 CGRHVDIFKFWLMWKAKGT-VGFENQINKCLELAEYLYAKIKN---REEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQ 438 (504)
T ss_dssp SSCBCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTT---CTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHH
T ss_pred CCCCccHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHHHhc---CCCEEEEecCCCCeEEEEEEEeCccccccccchh
Confidence 1135555555555542 22245678888999999999988 57888875 345556666542210 000
Q ss_pred HH---HHHHHHHHHHHHHcCeeE-eccccCccccCCCCCeEEEEec-CCCCHHHHHHHHHHHHHHHHHh
Q psy15447 388 AS---KKLLQTICDMCIQAGFAI-TCPSHLDQEAKKQKPSIRITCN-ISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 388 ~~---~~~~~~~~~~l~~~Gi~v-~~~~~~~~~~~~~~~~lRi~~~-~~~t~edi~~~~~~l~~~~~~~ 451 (457)
.. .....++.+.|.++|+.+ .+..+ ....+++|+++. ..+|++||++++++|+++.+++
T Consensus 439 ~~~~~~~~~~~l~~~L~~~G~~~~~~~~~-----~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 439 RREKLHKVAPKIKALMMESGTTMVGYQPQ-----GDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp HHHHHTTHHHHHHHHHHHHTSCEEEEEEE-----TTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC-
T ss_pred hHHHHHHHHHHHHHHHHhCCcEEEEeeEE-----CCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 00 012457888999999643 32221 111258999995 8899999999999999887543
No 215
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.93 E-value=6e-24 Score=210.48 Aligned_cols=245 Identities=14% Similarity=0.145 Sum_probs=187.6
Q ss_pred HHHHHHHHHHhhcCCCcEEE---ecccHHHHHHHHHhhcCCCCEEEEeC-cccHHHH-----------HHHHhcCCeEEE
Q psy15447 126 VHLDLENDIASFMGLEETAL---YSFGFSTSASAIAAYVKRNDAVFVDE-NINFAIQ-----------TGLIASRCKVQY 190 (457)
Q Consensus 126 ~~~~l~~~la~~~g~~~~i~---~~sG~~a~~~ai~a~~~~gd~v~~~~-~~h~~~~-----------~~~~~~g~~~~~ 190 (457)
-..+|++++|+++|.+.+++ ++||++|+..++.+++++||.|+++. +.|.... ..++..|.++..
T Consensus 75 g~~~Le~~lA~l~g~e~alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~ 154 (427)
T 3hvy_A 75 GRDSLDRVYANIFNTESAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKM 154 (427)
T ss_dssp HHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEE
T ss_pred hHHHHHHHHHHHhCCCceEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEE
Confidence 47889999999999999988 89999999999999999999999997 7776544 234456888888
Q ss_pred ecC----CCHHHHHHHHHhhchhcccCCCCccEEEEEec----CCCCCCCCCChHHHHHHHHH--cCcEEEEEcCccccc
Q psy15447 191 FKH----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEG----VYMNSADICPLKDILSLRSK--YQARIFVDESVSFGT 260 (457)
Q Consensus 191 ~~~----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~----v~~~~G~i~~l~~i~~l~~~--~g~~li~DEa~~~g~ 260 (457)
++. .|++++++.+++. +++++|++++ ++|++|.+.++++|+++|++ ||+++++|++|+.+.
T Consensus 155 v~~~~~~~d~e~l~~~i~~~---------~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~ 225 (427)
T 3hvy_A 155 VDLKDGKVDINTVKEELKKD---------DSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFV 225 (427)
T ss_dssp CCCBTTBCCHHHHHHHHHHC---------TTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTT
T ss_pred ecCCCCCcCHHHHHHHhhCC---------CCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccc
Confidence 887 7999999999741 2568999999 99999999999999999999 899999999998765
Q ss_pred ccCCCCccccccCCCCCCccEEEecCcccccC----cccEEEecHHHHHHHHhhC--CcceecCCCcHHHHHHHHHHHHH
Q psy15447 261 LGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSG--SGYCFSASLPPFLAVAANKALHL 334 (457)
Q Consensus 261 ~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aaa~a~l~~ 334 (457)
++.. . + ..++|++++|++|++|+ .||++++++++++.++... .+.....+.++..+..++..++.
T Consensus 226 ~~~~--p------~-~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~ 296 (427)
T 3hvy_A 226 EEKE--P------T-DVGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLFM 296 (427)
T ss_dssp SSSC--G------G-GGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHH
T ss_pred cCCC--C------c-ccCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHhH
Confidence 3321 1 1 12458999999999974 5799999999999987632 22222222222223444444443
Q ss_pred HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCC-----eEEEEecCCcchHHHHHHHHHHHHHHHHc
Q psy15447 335 LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTP-----LKYLYLQKSDDEVASKKLLQTICDMCIQA 403 (457)
Q Consensus 335 ~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~l~~~ 403 (457)
+ +.++++..+++.++.+.|++ .|+.+. +..++ ++.+.+++.. .+.++++.|...
T Consensus 297 ~---~~r~~~~~~~a~~la~~L~~----~g~~V~-p~~~~~~~~li~~~~l~~~~-------~~~~f~~~l~~~ 355 (427)
T 3hvy_A 297 A---PHVTIEAVKGAVFCARIMEL----AGFDVL-PKYNDKRTDIIQAIKFNDEK-------KLIDFIKGIQTA 355 (427)
T ss_dssp H---HHHHHHHHHHHHHHHHHHHH----TTCEEE-SCTTSCCSSSEEEEECSSHH-------HHHHHHHHHHHT
T ss_pred H---HHHHHHHHHHHHHHHHHHHh----CCCeec-CCCCCCCceEEEEEeCCCHH-------HHHHHHHHhccc
Confidence 3 35788899999999999998 566663 43444 8888887543 677899998875
No 216
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.92 E-value=1.3e-23 Score=220.31 Aligned_cols=316 Identities=13% Similarity=0.040 Sum_probs=209.4
Q ss_pred cChHHHHHHHHHHHhhcCCCcEEEecccH-HHHHHHHHhhcCCCCEEEEeCcccHHHHHH-HHhcCCeEEEecC------
Q psy15447 122 GTNVVHLDLENDIASFMGLEETALYSFGF-STSASAIAAYVKRNDAVFVDENINFAIQTG-LIASRCKVQYFKH------ 193 (457)
Q Consensus 122 g~~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~-~~~~g~~~~~~~~------ 193 (457)
+....+.++++.+|+++|.+.++++++|+ +++..++.+++++||.|+++.++|.+...+ +.++|++++.++.
T Consensus 170 ~~~~~i~e~e~~lA~~~gae~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~~~~~ 249 (730)
T 1c4k_A 170 IHEGPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYG 249 (730)
T ss_dssp TTBTHHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEECTTC
T ss_pred CChHHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCccccC
Confidence 44567899999999999999888888876 899999999999999999999999999988 8889988776542
Q ss_pred ----CCHHHH-----HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCccccc-ccC
Q psy15447 194 ----NNMQHL-----EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGT-LGS 263 (457)
Q Consensus 194 ----~d~~~l-----e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~-~g~ 263 (457)
.|++++ ++++++......+. ....++++++++ +++|.+.|+++|.++|++||+++|+||+|+.+. +++
T Consensus 250 i~g~id~e~L~~~~le~~i~~~~~~~~~t-~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~~ 327 (730)
T 1c4k_A 250 FIGGIYDSDFDEKKIRELAAKVDPERAKW-KRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIP 327 (730)
T ss_dssp CEEEECGGGSCHHHHHHHTTTSSHHHHTC-SCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSG
T ss_pred ccCCCCHHHHhhhHHHHHhhcCCcccccc-cCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccccccCc
Confidence 277777 66665420000000 011155555555 478999999999999999999999999997542 332
Q ss_pred CCCcc--c--cccCCCCCCccEEEecCcccccCc--ccEEEecHHH-------H--HHHHhhCCcceecCCCcHHHHHHH
Q psy15447 264 TGHGV--T--EYFGVSTEEVDMIIGSLEHALGSV--GGFCVGSSYI-------I--EHHRLSGSGYCFSASLPPFLAVAA 328 (457)
Q Consensus 264 ~g~~~--~--~~~~~~~~~~Di~~~s~sK~lg~~--gG~v~~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~aaa 328 (457)
.+++. . +.++.+ +..++++.|+||++++. ||++..++.. + ..+.... ....++++++...++.
T Consensus 328 ~~~g~~~l~~~~~g~D-~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~-~~~~stsp~~~~iaal 405 (730)
T 1c4k_A 328 MMRNSSPLLIDDLGPE-DPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSF-NLFMSTSPFYPMYAAL 405 (730)
T ss_dssp GGGGGCTTSCCCCCTT-SCEEEEEECHHHHSSCCTTCEEEEEECGGGTTSTTCCCHHHHHHHH-HHHSCSSCCHHHHHHH
T ss_pred ccCCcCcccccccCCC-CCCEEEEECCCCCCCCCCCEEEEEecchhhcCcccccCHHHHHHHH-HHhCCCCCcHHHHHHH
Confidence 21111 1 112321 11129999999999753 4566433221 1 1121111 1223455677776776
Q ss_pred HHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-----------------------------------
Q psy15447 329 NKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR----------------------------------- 371 (457)
Q Consensus 329 ~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~----------------------------------- 371 (457)
.++++.+.. ..++++++.++.+++++.|++. ++|+.+..+.
T Consensus 406 ~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~--i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 483 (730)
T 1c4k_A 406 DVNAAMQEGEAGRKLWHDLLITTIEARKKLIKA--GSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEG 483 (730)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHT--TCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTT
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhh--CCCeEEccccccccccccccccccccccchhhccCccchhccccc
Confidence 677776654 3557788999999999999761 2455553221
Q ss_pred --CC-----Ce-EEEEecCC--cch--HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHH
Q psy15447 372 --DT-----PL-KYLYLQKS--DDE--VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNS 439 (457)
Q Consensus 372 --~~-----~~-~~i~~~~~--~~~--~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~ 439 (457)
.+ |+ +.+..++. ... ......+..+.+.|+++||.+.... ...+|++++..+|++++++
T Consensus 484 ~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~~---------~~~ir~~~s~g~t~e~i~~ 554 (730)
T 1c4k_A 484 YGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKSD---------LNSILFLMTPAETPAKMNN 554 (730)
T ss_dssp CCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEEC---------SSEEEEECCTTCCHHHHHH
T ss_pred cCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEECC---------CCeEEEEeCCCCCHHHHHH
Confidence 11 11 33333210 000 0000135678899999999886432 4789999999999999999
Q ss_pred HHHHHHHHHHHhc
Q psy15447 440 LIETLCKSHDIAV 452 (457)
Q Consensus 440 ~~~~l~~~~~~~~ 452 (457)
++++|+++.+...
T Consensus 555 Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 555 LITQLLQLQRLIE 567 (730)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc
Confidence 9999999877653
No 217
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.92 E-value=2.5e-22 Score=205.38 Aligned_cols=313 Identities=12% Similarity=0.086 Sum_probs=211.2
Q ss_pred cChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhc-------C-CCC------EEEEeCcccHHHHHHHHhcC
Q psy15447 122 GTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYV-------K-RND------AVFVDENINFAIQTGLIASR 185 (457)
Q Consensus 122 g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~-------~-~gd------~v~~~~~~h~~~~~~~~~~g 185 (457)
+..+...++.+.+++++|.+ ..+++++|++|+..++.++. + +|+ .|+++...|.++..+++..|
T Consensus 145 ~~~~le~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g 224 (515)
T 2jis_A 145 VFVLMEEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLG 224 (515)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcC
Confidence 34566677888899999975 56888899999999988763 2 465 88999999999999998888
Q ss_pred C---eEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcc
Q psy15447 186 C---KVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVS 257 (457)
Q Consensus 186 ~---~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~ 257 (457)
. +++.++.+ |+++|++.+++.... ..++++|+++.+++++|.+.|+++|.++|++||+++|+|++|+
T Consensus 225 ~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~-----g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~ 299 (515)
T 2jis_A 225 LGTDSVRVVKADERGKMVPEDLERQIGMAEAE-----GAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWG 299 (515)
T ss_dssp SCGGGEEEECBCTTSCBCHHHHHHHHHHHHHT-----TCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTG
T ss_pred CCCCcEEEEecCCCCcCCHHHHHHHHHHHHhC-----CCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhh
Confidence 7 78887754 799999999763211 1246788999999999999999999999999999999999998
Q ss_pred cccccCCCCccccccCCCCCCccEEEecCcccccC-c-ccEEEecHH--HHHHHHhhCCcceec----------------
Q psy15447 258 FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS-V-GGFCVGSSY--IIEHHRLSGSGYCFS---------------- 317 (457)
Q Consensus 258 ~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~-~-gG~v~~~~~--~~~~~~~~~~~~~~~---------------- 317 (457)
.+.+.... ......++ .++|+++.+++|++++ . .|+++.++. +++.......++.++
T Consensus 300 ~~~~~~~~-~~~~~~g~--~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 376 (515)
T 2jis_A 300 GSVLLSQT-HRHLLDGI--QRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVV 376 (515)
T ss_dssp GGGGGCTT-TGGGGTTG--GGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCS
T ss_pred hHHHhChh-hHhhcCCC--ccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCC
Confidence 77653211 00112233 2568999999999963 3 377777655 555421111111110
Q ss_pred ---CCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCC------cchHH
Q psy15447 318 ---ASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKS------DDEVA 388 (457)
Q Consensus 318 ---~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~ 388 (457)
.....+...++++++.. +...++.++..++++++.+.|++ .+++++..++....+.+..... ...+.
T Consensus 377 ~~~rr~~al~~~~~l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~---~~g~~~~~~~~~~~v~f~~~p~~~~~~~~~~~~ 452 (515)
T 2jis_A 377 QCGRRVDCLKLWLMWKAQGD-QGLERRIDQAFVLARYLVEEMKK---REGFELVMEPEFVNVCFWFVPPSLRGKQESPDY 452 (515)
T ss_dssp CSSCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT---STTEEESSCCSSSEEEEEECCGGGTTCTTSTTH
T ss_pred CCCCcccHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHhc---CCCEEEeCCCCeeEEEEEEeCccccccccchhH
Confidence 01124444444444432 12235778888999999999988 5789887655555666654211 00000
Q ss_pred HH---HHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe-cCCCCHHHHHHHHHHHHHHHHH
Q psy15447 389 SK---KLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC-NISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 389 ~~---~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~~~ 450 (457)
.. .....+.+.|.++|+.+...... ....+++|+++ +..+|++|+++++++|++++++
T Consensus 453 ~~~l~~~~~~l~~~l~~~G~~~~~~~~~----~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 453 HERLSKVAPVLKERMVKEGSMMIGYQPH----GTRGNFFRVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp HHHHHTHHHHHHHHHHHHTSCEEEEEEE----TTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEEEE----CCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 00 01234778888899765321100 11136899999 8999999999999999987653
No 218
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.92 E-value=2.3e-23 Score=216.70 Aligned_cols=306 Identities=11% Similarity=0.076 Sum_probs=212.3
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccH-HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC--------
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGF-STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------- 194 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------- 194 (457)
...+.++++++|+++|.+.++++++|+ .||..++.+++++||.|++++++|.++..++.++|+++++++..
T Consensus 194 ~g~i~eaE~~lA~~fGa~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~~~gi~~ 273 (715)
T 3n75_A 194 SGPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILG 273 (715)
T ss_dssp BTHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCCBCTTCCBC
T ss_pred cHHHHHHHHHHHHHhCCCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecccccccccc
Confidence 456789999999999999999999885 89999999999999999999999999999999999998877631
Q ss_pred -------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCccccc-ccCCCC
Q psy15447 195 -------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGT-LGSTGH 266 (457)
Q Consensus 195 -------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~-~g~~g~ 266 (457)
|++++++++++... ....+++++.++ |++|.+.|+++|.++|++++ +++||||+.+. +++.+.
T Consensus 274 ~i~~~~~d~e~Le~~l~~~~~------~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~~~ 344 (715)
T 3n75_A 274 GIPQSEFQHATIAKRVKETPN------ATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYE 344 (715)
T ss_dssp CCCGGGGSHHHHHHHHHHSTT------CCSCSEEEEESS-CTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGGGT
T ss_pred CcccccCCHHHHHHHHhhCcC------ccCceEEEEECC-CCCCccCCHHHHHHHhCcCc--EEEccccccccccCCccc
Confidence 79999999986421 011124555444 78999999999999998774 79999998664 343222
Q ss_pred ccccccCCCC-CCccEE---EecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh--C
Q psy15447 267 GVTEYFGVST-EEVDMI---IGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA--N 338 (457)
Q Consensus 267 ~~~~~~~~~~-~~~Di~---~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~--~ 338 (457)
+.. .+.. +.+|++ ++|+||++++ .||++..++++.....+......+++++++..+|+..+++++++. .
T Consensus 345 ~~~---al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g 421 (715)
T 3n75_A 345 GKC---GMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAG 421 (715)
T ss_dssp TSS---TTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHH
T ss_pred ccc---ccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcc
Confidence 111 1110 123544 8999999976 468887765432222222223456777888888888889988863 4
Q ss_pred cHHHHHHHHHHHHHHHHhhccccc-CC--eEEeccCC-----------------------C-----Ce-EEEEecCC-cc
Q psy15447 339 PSLLTKLREKCNTMHSLLSQHKVT-QR--FLVQGHRD-----------------------T-----PL-KYLYLQKS-DD 385 (457)
Q Consensus 339 ~~~~~~l~~~~~~l~~~L~~~~~~-~~--~~~~~~~~-----------------------~-----~~-~~i~~~~~-~~ 385 (457)
+++++++.++.+++++.|+++... .+ +.+..+.. . |+ +.+..++- .+
T Consensus 422 ~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~ 501 (715)
T 3n75_A 422 KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKD 501 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCCCCCC
Confidence 568899999999999999873210 01 22221110 0 11 12222210 00
Q ss_pred h--HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 386 E--VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 386 ~--~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
. ......+..+.+.|.++||.+-... .+.+-+.++...|++++++++++|.++.+.
T Consensus 502 G~~~~~Gi~g~~~~~~L~~~~I~~E~~d---------~~~vl~l~s~g~~~~~~~~L~~aL~~~~~~ 559 (715)
T 3n75_A 502 GTMSDFGIPASIVAKYLDEHGIVVEKTG---------PYNLLFLFSIGIDKTKALSLLRALTDFKRA 559 (715)
T ss_dssp SCBCSSCCCHHHHHHHHHHTTCCCSEEE---------TTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CccccCCCcHHHHHHHHHHCCCEEEecC---------CCcEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 0 0000134567888888999875443 357778888889999999999999887654
No 219
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.91 E-value=9.4e-22 Score=199.78 Aligned_cols=305 Identities=11% Similarity=0.043 Sum_probs=207.8
Q ss_pred hHHHHHHHHHHHhhcCCCc-----------EEEecccHHHHHHHHHhhcCC---------C---------C-EEEEeCcc
Q psy15447 124 NVVHLDLENDIASFMGLEE-----------TALYSFGFSTSASAIAAYVKR---------N---------D-AVFVDENI 173 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~-----------~i~~~sG~~a~~~ai~a~~~~---------g---------d-~v~~~~~~ 173 (457)
.+...++.+.+++++|.+. .+++++|++|+..++.+...+ | + .|+++...
T Consensus 112 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~ 191 (486)
T 1js3_A 112 TELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQA 191 (486)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTC
T ss_pred HHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCC
Confidence 4455556667788888663 578899999999888765321 3 3 47889999
Q ss_pred cHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCc
Q psy15447 174 NFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQA 248 (457)
Q Consensus 174 h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~ 248 (457)
|.++..+++..|.+++.++.+ |+++|++.+++.... .....+|++..+++++|.+.|+++|.++|++||+
T Consensus 192 h~s~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~-----g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~ 266 (486)
T 1js3_A 192 HSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAA-----GLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDI 266 (486)
T ss_dssp CHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHT-----TCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTC
T ss_pred cHHHHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhC-----CCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCC
Confidence 999999999999999888763 799999999764310 0123477788888999999999999999999999
Q ss_pred EEEEEcCccccccc-CCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHH-H-HHHHHhhCCcce--------
Q psy15447 249 RIFVDESVSFGTLG-STGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSY-I-IEHHRLSGSGYC-------- 315 (457)
Q Consensus 249 ~li~DEa~~~g~~g-~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~-~-~~~~~~~~~~~~-------- 315 (457)
++++|++|+.+.+. +..+.. ..++ .++|+++.+.||+++. ..|+++.++. . .+.+.. ...|.
T Consensus 267 ~lhvD~a~g~~~~~~~~~~~~--~~g~--~~adsi~~~~hK~~~~p~~~G~l~~~~~~~l~~~~~~-~~~yl~~~~~~~~ 341 (486)
T 1js3_A 267 WLHVDAAYAGSAFICPEFRHL--LNGV--EFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKL-DPVYLKHSHQGSG 341 (486)
T ss_dssp EEEEECTTGGGGGGSTTTGGG--GTTG--GGCSEEEECHHHHSSCCSSCEEEEESCHHHHHGGGC-------------CC
T ss_pred EEEEehhhHHHHHHCHHHHHH--hcCc--cccCeeEEchhhhcCCCcceEEEEEeCHHHHHHHhcC-CchhhCCCccccc
Confidence 99999999876542 112221 1233 2568889999999974 3477766543 2 232210 00111
Q ss_pred -----------ecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCc
Q psy15447 316 -----------FSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD 384 (457)
Q Consensus 316 -----------~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 384 (457)
.+.....+.+.+++..+.. +...++.++..++++++.+.|++ .+++++..++..+++.+.+....
T Consensus 342 ~~~~~~~~~~~~~rr~~~~~~~~al~~~g~-~g~~~~~~~~~~~a~~l~~~L~~---~~~~~~~~~~~~~~v~f~~~~~~ 417 (486)
T 1js3_A 342 LITDYRHWQLPLGRRFRSLKMWFVFRMYGV-KGLQAYIRKHVQLSHEFEAFVLQ---DPRFEVCAEVTLGLVCFRLKGSD 417 (486)
T ss_dssp SCCCGGGSSSCSCCCCTHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH---CTTEEECSCCCSSEEEEEESSCH
T ss_pred CCCCccccCCCCCCchhHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHhc---CCCeEEeCCCceeEEEEEecChH
Confidence 0111233444444443321 12245678888999999999988 57898875566778877775421
Q ss_pred chHHHHHHHHHHHHHHHHcCeeE-eccccCccccCCCCCeEEEEe-cCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447 385 DEVASKKLLQTICDMCIQAGFAI-TCPSHLDQEAKKQKPSIRITC-NISHTEQDMNSLIETLCKSHDIAVQP 454 (457)
Q Consensus 385 ~~~~~~~~~~~~~~~l~~~Gi~v-~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~~~~~~~ 454 (457)
....++.+.|.++|+.+ .+.. ..+.+++|+++ +..+|++|+++++++|+++++++.+.
T Consensus 418 ------~~~~~l~~~L~~~g~~~~~~~~------~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~~~~~ 477 (486)
T 1js3_A 418 ------GLNEALLERINSARKIHLVPCR------LRGQFVLRFAICSRKVESGHVRLAWEHIRGLAAELLAA 477 (486)
T ss_dssp ------HHHHHHHHHHHHHTSCBCEEEE------ETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred ------HHHHHHHHHHHhcCCEEEEEEE------ECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 13467889999888653 2221 12356899997 55578999999999999998876543
No 220
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.91 E-value=2.7e-23 Score=208.48 Aligned_cols=281 Identities=12% Similarity=0.111 Sum_probs=195.4
Q ss_pred ChHHHHHHHHHHHhhcCCCcEEEec-ccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--C-----
Q psy15447 123 TNVVHLDLENDIASFMGLEETALYS-FGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--N----- 194 (457)
Q Consensus 123 ~~~~~~~l~~~la~~~g~~~~i~~~-sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--~----- 194 (457)
......++++.+++ +|.++.++++ +|++|+..++.+++++||.|+++.++|.++..++...|.+++.++. +
T Consensus 55 ~~~~~~~~~~~la~-~g~~~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~ 133 (446)
T 2x3l_A 55 PEEVILKSMKQVEK-HSDYDGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIETHQSPLTNH 133 (446)
T ss_dssp CSSHHHHHHHHHCS-CTTEEEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECEEEECTTTSS
T ss_pred cchHHHHHHHHHHh-cCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEeCeeccccCc
Confidence 34567899999999 9987666555 4568999999999999999999999999999999999988877664 3
Q ss_pred ----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcccc
Q psy15447 195 ----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTE 270 (457)
Q Consensus 195 ----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~ 270 (457)
|++++ + . +++++|++++ .|++|.+.|+++|+++|++||+++|+||+|+. .++..+. ...
T Consensus 134 ~~~~d~~~l---~---~--------~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~-~~~f~~~-~~~ 196 (446)
T 2x3l_A 134 YNKVNLSRL---N---N--------DGHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGA-HFGLQGF-PDS 196 (446)
T ss_dssp EEEEEC---------------------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCT-TTTSTTS-CCC
T ss_pred CCCCCHHHH---c---C--------CCceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhh-hhccCCC-CCC
Confidence 23444 1 1 2456777777 55699999999999999999999999999985 2221121 111
Q ss_pred ccCCCCCCccEEEecCccccc-C-cccEEEecHHHHH--HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC-cH-HHHH
Q psy15447 271 YFGVSTEEVDMIIGSLEHALG-S-VGGFCVGSSYIIE--HHRLSGSGYCFSASLPPFLAVAANKALHLLKAN-PS-LLTK 344 (457)
Q Consensus 271 ~~~~~~~~~Di~~~s~sK~lg-~-~gG~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~-~~-~~~~ 344 (457)
... .++|+++.|+||+++ + .+|++++++++++ .+..... ...+++.+...+++..++++.++.. .+ +.++
T Consensus 197 ~~~---~g~Di~~~S~~K~l~~~~g~g~l~~~~~~i~~~~~~~~~~-~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~ 272 (446)
T 2x3l_A 197 TLN---YQADYVVQSFHKTLPALTMGSVLYIHKNAPYRENIIEYLS-YFQTSSPSYLIMASLESAAQFYKTYDSTLFFAK 272 (446)
T ss_dssp GGG---GTCSEEEECHHHHSSSCTTCEEEEEETTCTTHHHHHHHHH-HHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_pred hHH---cCCCEEEECCccccccccccEEEEEcCCcCCHHHHHHHHH-HHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 111 124899999999774 3 3588888776644 2222111 1123345666666666677777654 23 6667
Q ss_pred HHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeE
Q psy15447 345 LREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSI 424 (457)
Q Consensus 345 l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~l 424 (457)
.+++.+++++. ++.+..+.....+++.+.. . ...++.+.|.++||.+.... .+++
T Consensus 273 ~~~l~~~l~~~--------g~~~~~~~~~~~l~i~~~~-~-------~~~~l~~~L~~~GI~v~~~g---------~~~i 327 (446)
T 2x3l_A 273 RAQLIECLENK--------GFEMLQVDDPLKLLIKYEG-F-------TGHDIQNWFMNAHIYLELAD---------DYQA 327 (446)
T ss_dssp HHHHHHHHHHH--------TCEEEECSSTTEEEEECTT-S-------CHHHHHHHHHHTTEEESEEC---------SSCE
T ss_pred HHHHHHHHHHc--------CCEECcCCCCeEEEEEeCC-c-------CHHHHHHHHHHCCCEEEecC---------CCEE
Confidence 77777776664 4555433333456666652 2 34578899999999986221 3689
Q ss_pred EEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447 425 RITCNISHTEQDMNSLIETLCKSHDIA 451 (457)
Q Consensus 425 Ri~~~~~~t~edi~~~~~~l~~~~~~~ 451 (457)
|++++..+|++|+ +++++|+++++..
T Consensus 328 Ri~~~~~~t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 328 LAILPLWHHDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp EEECCCCCTTCCC-CHHHHHHHHHTCC
T ss_pred EEEeecCCCHHHH-HHHHHHHHHHHhh
Confidence 9999998999999 9999999987654
No 221
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.91 E-value=7.1e-23 Score=202.34 Aligned_cols=329 Identities=11% Similarity=-0.004 Sum_probs=209.0
Q ss_pred eeeEEeecCCccCC----CCChhhHHHHHHHH-HhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----Cc--EEEecc
Q psy15447 80 IPCINFATHNYLSF----VENPDIEKCAIDCI-DKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EE--TALYSF 148 (457)
Q Consensus 80 ~~~id~~s~~~l~~----~~~p~i~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~--~i~~~s 148 (457)
...|||+-+.|... ...+.+++|.. .+ +.-+. .++....|..++.+.+++.+.+..+. +. ++++++
T Consensus 29 ~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~--~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G 105 (405)
T 3k7y_A 29 EEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKE--KPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIG 105 (405)
T ss_dssp SSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCC--CCCCTTSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEH
T ss_pred cCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCC--CCCCCCCCcHHHHHHHHHHHcCCCCccccccceEEEEcCc
Confidence 35789987655332 22466777765 33 22111 12222345666666665555443332 22 366777
Q ss_pred cHHHHHHHHHhhcC--CCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccE
Q psy15447 149 GFSTSASAIAAYVK--RNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKK 219 (457)
Q Consensus 149 G~~a~~~ai~a~~~--~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~ 219 (457)
|++|+..++.+++. + |.|++..++|..+...++..|.+++.++. .|++++++.+++. ++++
T Consensus 106 ~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~---------~~~~ 175 (405)
T 3k7y_A 106 GTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNI---------PNGS 175 (405)
T ss_dssp HHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHS---------CSSC
T ss_pred hHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhC---------CCCe
Confidence 88999999888887 8 99999999999999999999999888764 1688999888752 2345
Q ss_pred EEEEec-CCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCC---ccccccCCCCCCccEEEecCcccccC
Q psy15447 220 FIIVEG-VYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGH---GVTEYFGVSTEEVDMIIGSLEHALGS 292 (457)
Q Consensus 220 ~vi~e~-v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~---~~~~~~~~~~~~~Di~~~s~sK~lg~ 292 (457)
++++.+ .+||||.+.+ +++|.++|++||+++|+||+|....++.... ......... ++ .|+++||||++|.
T Consensus 176 ~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~-~~-~i~~~S~SK~~~l 253 (405)
T 3k7y_A 176 SVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKN-IA-FSVCQSFSKNMSL 253 (405)
T ss_dssp EEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTT-CC-EEEEEECTTTSCC
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcC-Cc-EEEEeeCCccCCC
Confidence 666654 5899999998 6688899999999999999997544431100 111111111 22 4889999999986
Q ss_pred cc---cEEE---ecHHHHHHHHhhC---CcceecCCCcHHHHHHHHHHHHH-------HhhCcHHHHHHHHHHHHHHHHh
Q psy15447 293 VG---GFCV---GSSYIIEHHRLSG---SGYCFSASLPPFLAVAANKALHL-------LKANPSLLTKLREKCNTMHSLL 356 (457)
Q Consensus 293 ~g---G~v~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~aaa~a~l~~-------~~~~~~~~~~l~~~~~~l~~~L 356 (457)
+| ||++ .++++++.+.... ....++ +.+.+..+++.++++. .++...++++++++++.+.+.|
T Consensus 254 ~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L 332 (405)
T 3k7y_A 254 YGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYS-SPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKL 332 (405)
T ss_dssp TTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTS-SCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceEEEEEeCCHHHHHHHHHHHHHHHhcccC-CCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66 8874 3566655442110 011222 2345554444444432 1122345677889999999999
Q ss_pred h----cccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCC
Q psy15447 357 S----QHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISH 432 (457)
Q Consensus 357 ~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~ 432 (457)
+ ++..-.++++..+.++.++|+.+.. +++++|.++||++.+. + ||+++. .
T Consensus 333 ~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~------------~~~~~L~~~gV~v~p~-----------~--Ris~a~-~ 386 (405)
T 3k7y_A 333 ETYQKKYNLNYDWNVYKKQRGLFSFVPLLA------------KIAEHLKTHHIYIINN-----------G--RINVSG-I 386 (405)
T ss_dssp HHHGGGGTCCCCGGGGSSCCSSEEECGGGG------------GGTTTTTTTTEECCTT-----------S--EEEGGG-C
T ss_pred HhhhhhcCCCCCCccccCCceEEEecCCCH------------HHHHHHHHCCEeecCC-----------C--eEEEec-c
Confidence 8 7211011344434556666654332 2345666779998752 1 898853 5
Q ss_pred CHHHHHHHHHHHHHHHHH
Q psy15447 433 TEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 433 t~edi~~~~~~l~~~~~~ 450 (457)
++++|++++++|+++++.
T Consensus 387 ~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 387 TKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp CTTHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHhh
Confidence 789999999999998764
No 222
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.91 E-value=4.8e-24 Score=210.51 Aligned_cols=274 Identities=12% Similarity=0.105 Sum_probs=190.8
Q ss_pred HHHHHHHHhhcC-------C-CcEEEecccHHHHHHHHHhhcCCCC----EEEEeCcccHHHHHHHHhcCCeEEEecCCC
Q psy15447 128 LDLENDIASFMG-------L-EETALYSFGFSTSASAIAAYVKRND----AVFVDENINFAIQTGLIASRCKVQYFKHNN 195 (457)
Q Consensus 128 ~~l~~~la~~~g-------~-~~~i~~~sG~~a~~~ai~a~~~~gd----~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d 195 (457)
.+|++.+|++++ . +.+++++++++++..++.+++++|| .|+++.++|..+...++..|.++..++.+
T Consensus 71 ~~lr~aia~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d- 149 (391)
T 3bwn_A 71 PELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGD- 149 (391)
T ss_dssp HHHHHHHHHHHHHHCSBCCSSSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEE-
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCC-
Confidence 677778887776 3 2456666667899999999999999 99999999999999999999888776642
Q ss_pred HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcC--cEEEEEcCcccccccCCCCccccccC
Q psy15447 196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQ--ARIFVDESVSFGTLGSTGHGVTEYFG 273 (457)
Q Consensus 196 ~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g--~~li~DEa~~~g~~g~~g~~~~~~~~ 273 (457)
.+.++ . +++++|++++++||+|.+.+ +|.+ ++|+ +++|+||+|..+ . ...+.
T Consensus 150 ~~~l~----~----------~~~k~v~l~~p~NPtG~~~~--~l~~--~~~~~~~~ii~De~y~~~---~-~~~l~---- 203 (391)
T 3bwn_A 150 AWGFD----K----------KGPYIELVTSPNNPDGTIRE--TVVN--RPDDDEAKVIHDFAYYWP---H-YTPIT---- 203 (391)
T ss_dssp STTCC----C----------CSCEEEEEESSCTTTCCCCC--CCC-------CCCEEEEECTTCST---T-TSCCC----
T ss_pred HHHcC----C----------CCCEEEEECCCCCCCchhHH--HHHH--HhhcCCCEEEEeCCCCCC---C-CCccc----
Confidence 22222 1 24577878999999999986 4433 2255 999999998642 1 11111
Q ss_pred CCCCCccEEEecCcccccCcc---cEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh----------h-C
Q psy15447 274 VSTEEVDMIIGSLEHALGSVG---GFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK----------A-N 338 (457)
Q Consensus 274 ~~~~~~Di~~~s~sK~lg~~g---G~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~----------~-~ 338 (457)
.. .+.+|+++||||.+|++| ||+++ ++++++.+...... ...+.+++...++.++++.-. + .
T Consensus 204 ~~-~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~~~--~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~ 280 (391)
T 3bwn_A 204 RR-QDHDIMLFTFSKITGHAGSRIGWALVKDKEVAKKMVEYIIV--NSIGVSKESQVRTAKILNVLKETCKSESESENFF 280 (391)
T ss_dssp CC-BCCSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHHHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHH
T ss_pred cC-CCCeEEEEechhhcCCCccceEEEEecCHHHHHHHHHHhcc--cccCCCHHHHHHHHHHHhCcchhccccccHHHHH
Confidence 11 234799999999998777 99986 88888877653321 123347777777777776431 1 2
Q ss_pred cHHHHHHHHHHHHHHHHhhcccccCCeEEecc-------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCe
Q psy15447 339 PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGF 405 (457)
Q Consensus 339 ~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi 405 (457)
++.++.++++.+++.+.|++ .+++.+..+ ..+.++++.+.... .+.+.|.++||
T Consensus 281 ~~~~~~~~~~~~~l~~~L~~---~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~~----------~~~~~l~~~gV 347 (391)
T 3bwn_A 281 KYGREMMKNRWEKLREVVKE---SDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEET----------DLVSELRRHKV 347 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---CSSEECCCCCCEEETTTTEEECCCCSEEEEEESSSC----------CHHHHHHHTTE
T ss_pred HHHHHHHHHHHHHHHHHHHh---CCCcccccCCccccccccccCCCcceEEEecCCcHH----------HHHHHHHHCCE
Confidence 35678888999999999988 346655322 23346777776432 35566778999
Q ss_pred eEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 406 AITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 406 ~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
.++++..+. ...+++||++.. +++++++++++|+++++.
T Consensus 348 ~v~pg~~fg----~~~~~iRis~~~--~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 348 MSRAGERCG----SDKKHVRVSMLS--REDVFNVFLERLANMKLI 386 (391)
T ss_dssp ECEEGGGGT----CCTTEEEEESCS--CHHHHHHHHHHHHSCC--
T ss_pred EEccCCCCC----CCCCEEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 999876542 235799999983 899999999999887654
No 223
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.91 E-value=5.3e-23 Score=203.58 Aligned_cols=285 Identities=10% Similarity=0.023 Sum_probs=197.8
Q ss_pred hHHHHHHHHHHHhhcCCC---cEEE-ecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH-HHHhc--CCeEEEecCCCH
Q psy15447 124 NVVHLDLENDIASFMGLE---ETAL-YSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT-GLIAS--RCKVQYFKHNNM 196 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~---~~i~-~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~-~~~~~--g~~~~~~~~~d~ 196 (457)
.+...++++++++++|.+ .+++ +++|++|+..++.+++++| .+.+....|..... ..... |.++..++.++-
T Consensus 77 ~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~g 155 (398)
T 2fyf_A 77 KNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSDPG 155 (398)
T ss_dssp HHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence 356788999999999975 4566 6788899999999998887 23335555643222 23343 666666654310
Q ss_pred HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC
Q psy15447 197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST 276 (457)
Q Consensus 197 ~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~ 276 (457)
..... +. .+++++|++.+++|++|.+.|+++|.++ ||+++|+||+|+.|... .++
T Consensus 156 ~~~~~---~i--------~~~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~---------~~~-- 210 (398)
T 2fyf_A 156 SAPEP---QT--------DPSVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLP---------VDI-- 210 (398)
T ss_dssp CCCCC---CC--------CTTCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSC---------CCG--
T ss_pred CCCCc---cc--------cCCCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcc---------cCc--
Confidence 00000 11 1345788888999999999999888887 89999999999865321 111
Q ss_pred CCccEEEecCcccccCcc--cEEEecHHHHHHHHhhC--------------------CcceecCCCcHHHHHHHHHHHHH
Q psy15447 277 EEVDMIIGSLEHALGSVG--GFCVGSSYIIEHHRLSG--------------------SGYCFSASLPPFLAVAANKALHL 334 (457)
Q Consensus 277 ~~~Di~~~s~sK~lg~~g--G~v~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~aaa~a~l~~ 334 (457)
.++|+++.|++|++|+.| |++++++++++.++... ....+ .+.+...++++.++++.
T Consensus 211 ~~~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~t~~~~~~~a~~~al~~ 289 (398)
T 2fyf_A 211 AETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTY-NTPAIATLALLAEQIDW 289 (398)
T ss_dssp GGCSEEEECTTSTTCSCSSEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCS-SCCCHHHHHHHHHHHHH
T ss_pred ccCcEEEEecCcccCCCCceEEEEECHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCC-CCCCHHHHHHHHHHHHH
Confidence 235899999999998764 67888998887763210 01122 23466666667777776
Q ss_pred Hhh---CcHHHHHHHHHHHHHHHHhhcccccCCeEEec--c-CCCC-eEEEEecCCcchHHHHHHHHHHHHHHHHcCeeE
Q psy15447 335 LKA---NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG--H-RDTP-LKYLYLQKSDDEVASKKLLQTICDMCIQAGFAI 407 (457)
Q Consensus 335 ~~~---~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~--~-~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v 407 (457)
+.+ .++.+++.+++++++.+.|++ .+|+++.. + ..++ ++++.++... ...++.+.|.++||.+
T Consensus 290 ~~~~g~~~~~~~~~~~~~~~l~~~L~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L~~~gI~v 359 (398)
T 2fyf_A 290 LVGNGGLDWAVKRTADSSQRLYSWAQE---RPYTTPFVTDPGLRSQVVGTIDFVDDV-------DAGTVAKILRANGIVD 359 (398)
T ss_dssp HHHHTSHHHHHHHHHHHHHHHHHHHHH---STTEEESCCSGGGBCSSEEEEEECTTS-------CHHHHHHHHHHTTCBC
T ss_pred HHHccCHHHHHHHHHHHHHHHHHHHHH---cCCceeccCChhhcCCcEEEEECCCCC-------CHHHHHHHHHHCCcEE
Confidence 543 245778899999999999988 45887753 2 1345 7888875433 3467899999999998
Q ss_pred eccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 408 TCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 408 ~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
+++.. ..+.+++|++++..+|++|+++++++|++++++
T Consensus 360 ~~g~~-----~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 360 TEPYR-----KLGRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp CSCCT-----TTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred ecCcc-----cCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 76421 122478999999889999999999999988764
No 224
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.91 E-value=1.5e-22 Score=214.21 Aligned_cols=313 Identities=14% Similarity=0.118 Sum_probs=210.0
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEecccH-HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC--------
Q psy15447 124 NVVHLDLENDIASFMGLEETALYSFGF-STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------- 194 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------- 194 (457)
.....++++.+++++|.+..+++++|+ +|+..++.+++++||.|+++.++|.++..++...|++++.++..
T Consensus 204 ~g~v~~~ee~la~l~G~d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~~~g~~g 283 (755)
T 2vyc_A 204 TGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGIIG 283 (755)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBCTTSCBC
T ss_pred ccHHHHHHHHHHHHhCCCceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCCcccccc
Confidence 456788999999999999888887775 78999999999999999999999999999999999988876531
Q ss_pred -------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCccccc-ccCCCC
Q psy15447 195 -------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGT-LGSTGH 266 (457)
Q Consensus 195 -------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~-~g~~g~ 266 (457)
|++++++++++........ ..++++++++++ +++|.+.|+++|.++|++||+++++||+|+.+. ++..++
T Consensus 284 ~i~~~~~d~e~le~~i~~~~~~k~~~-~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~~~~~ 361 (755)
T 2vyc_A 284 PIYPQEMQPETLQKKISESPLTKDKA-GQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYA 361 (755)
T ss_dssp CCCGGGGSHHHHHHHHHHCTTTGGGT-TCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGGGT
T ss_pred ccCcCCCCHHHHHHHHHhCccccccc-cCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhcccCcccC
Confidence 8999999997531100000 012235555555 579999999999999999999999999997542 222111
Q ss_pred ccccccC--CC-CCCccEEEecCcccccCc--ccEEEecHH--HH--HHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh
Q psy15447 267 GVTEYFG--VS-TEEVDMIIGSLEHALGSV--GGFCVGSSY--II--EHHRLSGSGYCFSASLPPFLAVAANKALHLLKA 337 (457)
Q Consensus 267 ~~~~~~~--~~-~~~~Di~~~s~sK~lg~~--gG~v~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~ 337 (457)
+.....+ .+ .+..+|++.|+||++++. ||++..++. .+ ..+.... ....+++++....++..++++.+..
T Consensus 362 ~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~-~~~~s~sp~~~~iaal~aA~~~l~~ 440 (755)
T 2vyc_A 362 DHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAY-MMHATTSPLYAICASNDVAVSMMDG 440 (755)
T ss_dssp TSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHH-HHTSCSSCCHHHHHHHHHHHHHHST
T ss_pred CcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHHH-HHhCCCCHHHHHHHHHHHHHHHHHh
Confidence 1111122 11 122345899999999753 567766543 11 1222111 1122345677777777778887754
Q ss_pred C--cHHHHHHHHHHHHHHHHhhcccccCC---------eEEeccC-----------------------------------
Q psy15447 338 N--PSLLTKLREKCNTMHSLLSQHKVTQR---------FLVQGHR----------------------------------- 371 (457)
Q Consensus 338 ~--~~~~~~l~~~~~~l~~~L~~~~~~~~---------~~~~~~~----------------------------------- 371 (457)
. .++++++.++.+++++.|+++ .+ +.+.++.
T Consensus 441 ~gg~~~~~~~~~~a~~~r~~L~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (755)
T 2vyc_A 441 NSGLSLTQEVIDEAVDFRQAMARL---YKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGES 517 (755)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhc---cccccccccceeeccCchhccccccccccccccccchhccchhhhhccCcccc
Confidence 2 467888999999999999873 33 3332211
Q ss_pred --------C------CCeEEEEecC-Ccch--HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCH
Q psy15447 372 --------D------TPLKYLYLQK-SDDE--VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTE 434 (457)
Q Consensus 372 --------~------~~~~~i~~~~-~~~~--~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ 434 (457)
. ...+.+.++. .... +.....+..+.+.|.++||.+.... .+.+|++++...|+
T Consensus 518 ~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~~---------~~~v~~~~~~g~t~ 588 (755)
T 2vyc_A 518 WHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTT---------DFQIMFLFSMGVTR 588 (755)
T ss_dssp TTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEEC---------SSEEEEECCTTCCT
T ss_pred cccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeecC---------CCeEEEEECCCCCH
Confidence 1 1233444432 0000 0000133578888988998875322 47899999999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy15447 435 QDMNSLIETLCKSHDIA 451 (457)
Q Consensus 435 edi~~~~~~l~~~~~~~ 451 (457)
+++++++++|.++.+..
T Consensus 589 ~~~~~l~~al~~~~~~~ 605 (755)
T 2vyc_A 589 GKWGTLVNTLCSFKRHY 605 (755)
T ss_dssp TTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999987644
No 225
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.90 E-value=5.1e-23 Score=204.78 Aligned_cols=254 Identities=13% Similarity=0.136 Sum_probs=184.2
Q ss_pred hHHHHHHHHHHHhhcCCCcEEE---ecccHHHHHHHHHhhcCCCCEEEEeC-cccHHHHHHHHh----------cCCeEE
Q psy15447 124 NVVHLDLENDIASFMGLEETAL---YSFGFSTSASAIAAYVKRNDAVFVDE-NINFAIQTGLIA----------SRCKVQ 189 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~~i~---~~sG~~a~~~ai~a~~~~gd~v~~~~-~~h~~~~~~~~~----------~g~~~~ 189 (457)
.....++++.+++++|.+.+.+ ++||++|+..++.+++++||.|++.. +.|..+...+.+ .|.++.
T Consensus 64 ~~~~~~l~~~la~~~g~~~~~~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~ 143 (431)
T 3ht4_A 64 DIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYN 143 (431)
T ss_dssp CHHHHHHHHHHHHHTTCSEECCBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEE
T ss_pred hhhHHHHHHHHHHHhCCCcccccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEE
Confidence 3557889999999999988766 78999999999999999999999988 888888766543 578888
Q ss_pred EecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEec----CCCCCCCCCChHHHHHHHHH--cCcEEEEEcCccc
Q psy15447 190 YFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEG----VYMNSADICPLKDILSLRSK--YQARIFVDESVSF 258 (457)
Q Consensus 190 ~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~----v~~~~G~i~~l~~i~~l~~~--~g~~li~DEa~~~ 258 (457)
.++. .|++++++.+++ ++++|++++ +.+++|.+.++++|+++|++ ||+++|+||+|+.
T Consensus 144 ~v~~~~~~~~d~e~l~~~l~~-----------~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~ 212 (431)
T 3ht4_A 144 AVPLTEGGLVDFEAVAAAIHS-----------NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGE 212 (431)
T ss_dssp ECCBCTTSSBCHHHHHHHCCT-----------TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCT
T ss_pred EeCCCCCCCcCHHHHHhhcCC-----------CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChh
Confidence 8887 389999988753 467888885 44555666679999999999 9999999999987
Q ss_pred ccccCCCCccccccCCCCCCccEEEecCccccc----CcccEEEecHHHHHHHHhhCCc--ceecCCCcHHHHHHHHHHH
Q psy15447 259 GTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG----SVGGFCVGSSYIIEHHRLSGSG--YCFSASLPPFLAVAANKAL 332 (457)
Q Consensus 259 g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg----~~gG~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aaa~a~l 332 (457)
+..+. ... .+ ++|++++|++|++| ..||++++++++++.++..... .....+.++..+++++..+
T Consensus 213 ~~~~~--~~~--~~-----g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l 283 (431)
T 3ht4_A 213 FIEEQ--EPC--HV-----GADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGF 283 (431)
T ss_dssp TSSSC--CGG--GT-----TCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHH
T ss_pred hccCC--Ccc--cc-----CCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCcccccCccHHHHHHHHhHh
Confidence 65432 111 12 34899999999975 4589999999999988653222 1111112222234445555
Q ss_pred HHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCC-----eEEEEecCCcchHHHHHHHHHHHHHHHHc---C
Q psy15447 333 HLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTP-----LKYLYLQKSDDEVASKKLLQTICDMCIQA---G 404 (457)
Q Consensus 333 ~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~l~~~---G 404 (457)
+.+ +.++++..+++.++.+.|++ .|+.+. +.... ++.+.+++.. ...++++.|.+. +
T Consensus 284 ~~~---~~~~~~~~~~a~~l~~~L~~----~g~~v~-p~~~~~~~~li~~i~l~~~~-------~~~~~~~~l~~~~~~~ 348 (431)
T 3ht4_A 284 FLA---PHVAGQALKGAIFTAAFLEK----LGMNTS-PAWNAPRTDLIQSVQFDDKD-------RMIAFCQAIQYASPIN 348 (431)
T ss_dssp HHH---HHHHHHHHHHHHHHHHHHHH----HTCCEE-SCTTSCCSSSCCEEECCCHH-------HHHHHHHHHHHTSSSS
T ss_pred hhH---HHHHHHHHHHHHHHHHHHHh----CcCEec-CCCCCCCccEEEEEEeCCHH-------HHHHHHHHHHhcCccc
Confidence 544 34678889999999999988 455542 22333 7778877543 677899999886 4
Q ss_pred eeEecccc
Q psy15447 405 FAITCPSH 412 (457)
Q Consensus 405 i~v~~~~~ 412 (457)
.++.|..+
T Consensus 349 ~~~~p~~~ 356 (431)
T 3ht4_A 349 SHFTPYAN 356 (431)
T ss_dssp TTSCCCCE
T ss_pred cccCCCCC
Confidence 44444433
No 226
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.90 E-value=5.3e-22 Score=199.79 Aligned_cols=294 Identities=12% Similarity=0.095 Sum_probs=199.6
Q ss_pred hHHHHHHHHHHHhhcCCCc-EEEecccH-HHHHHHHHhhcC--CCCEEEEeCcccHHHHHHHHhcCCeEEEecC------
Q psy15447 124 NVVHLDLENDIASFMGLEE-TALYSFGF-STSASAIAAYVK--RNDAVFVDENINFAIQTGLIASRCKVQYFKH------ 193 (457)
Q Consensus 124 ~~~~~~l~~~la~~~g~~~-~i~~~sG~-~a~~~ai~a~~~--~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------ 193 (457)
.+...++++++++++|.+. ++++++|+ .++..++.++.. +++.|++....|.++...++..|.++..++.
T Consensus 132 ~~~~~~~~~~la~~~g~~~~~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~ 211 (456)
T 2z67_A 132 YALTNKILESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDR 211 (456)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTE
T ss_pred HHHHHHHHHHHHHHcCCCCCEEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEeccCCC
Confidence 4566779999999999764 67777888 567666666543 6788888888999999999999998877653
Q ss_pred --CCHHHHHHHH-HhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcccc
Q psy15447 194 --NNMQHLEELL-RQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTE 270 (457)
Q Consensus 194 --~d~~~le~~l-~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~ 270 (457)
.|++++++.+ +... ..++.+|++..+++++|.+.|+++|.++|++||+++++||+|+....|.... ...
T Consensus 212 ~~~d~~~l~~~i~~~~~-------~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~-~~~ 283 (456)
T 2z67_A 212 VYVPVEDIENAIKKEIE-------LGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEK-LKK 283 (456)
T ss_dssp EECCHHHHHHHHHHHHH-------TTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHH-HHH
T ss_pred CCcCHHHHHHHHHHHhh-------CCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHH-HHH
Confidence 3899999999 4211 0245677788888899999999999999999999999999987544321000 000
Q ss_pred ccCCCCCCccEEEecCccccc-C-cccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh--CcHHHHHH
Q psy15447 271 YFGVSTEEVDMIIGSLEHALG-S-VGGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA--NPSLLTKL 345 (457)
Q Consensus 271 ~~~~~~~~~Di~~~s~sK~lg-~-~gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l 345 (457)
.+ . .++|+++.|++|+++ + .+|+++. ++++++.+.....+ ..+.++ ..++.+++..+.. .++..++.
T Consensus 284 ~~--~-~~~D~~~~s~hK~~~~p~g~G~l~~~~~~~~~~l~~~~~g---~~~~~~--~~~~~aal~~l~~~~~~~~~~~~ 355 (456)
T 2z67_A 284 AF--K-YRVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEISLSYPG---RASATP--VVNTLVSLLSMGSKNYLELVKNQ 355 (456)
T ss_dssp HH--T-SCCSEEEEEHHHHHCCCSSCEEEEESCHHHHHHHHTTSCS---CBCSHH--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hh--C-CCCCEEEEcCCCCcCCCCCeEEEEEcCHHHHhhcCcCCCC---CCCCCH--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1 145899999999864 3 3588888 57777776432221 112232 2223333333322 24567888
Q ss_pred HHHHHHHHHHhhcccccC---CeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCe---eEe------ccccC
Q psy15447 346 REKCNTMHSLLSQHKVTQ---RFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGF---AIT------CPSHL 413 (457)
Q Consensus 346 ~~~~~~l~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi---~v~------~~~~~ 413 (457)
.++++++.+.|++ .+ |+.+..+ . +++++.+..+. ...++.+.|.++|+ .+. .+.++
T Consensus 356 ~~~~~~l~~~L~~---~~~~~g~~v~~~-~-~~v~~~~~~~~-------~~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~ 423 (456)
T 2z67_A 356 KNSKKLLDELLND---LSKKTGGKFLDV-E-SPIASCISVNS-------DPVEIAAKLYNLRVTGPRGIKKTDHFGNCYL 423 (456)
T ss_dssp HHHHHHHHHHHHH---HHHHSSCCBCCC-C-CSSEEEEECSS-------CHHHHHHHHHHTTEESCEEECTTCHHHHTCS
T ss_pred HHHHHHHHHHHHh---cccccCCEecCC-C-CeEEEEEeccc-------HHHHHHHHHHHcCCCcceEEeecCccccccc
Confidence 9999999999988 33 6555433 3 66666663221 12468888999986 222 01111
Q ss_pred ccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447 414 DQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 414 ~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 448 (457)
. ....+++|++++..+|++|+|+++++|++++
T Consensus 424 ~---~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 424 G---TYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp S---CCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred c---ccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 0 1124689999999999999999999998754
No 227
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.89 E-value=4.1e-21 Score=196.87 Aligned_cols=337 Identities=12% Similarity=0.046 Sum_probs=208.5
Q ss_pred eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHH-HhhcC-------CCcEEEecccHHHH
Q psy15447 82 CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDI-ASFMG-------LEETALYSFGFSTS 153 (457)
Q Consensus 82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~l-a~~~g-------~~~~i~~~sG~~a~ 153 (457)
++||+.+.+ ++ +.|.+.+++.+.+.. .. +....|..+..+++.+.+ .+..+ .+.+++++++++++
T Consensus 106 ~i~l~~g~~-~~-~~~~~~~al~~~~~~--~~---Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal 178 (546)
T 2zy4_A 106 SLSYVRDQL-GL-DPAAFLHEMVDGILG--CN---YPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAM 178 (546)
T ss_dssp HHHHHHHTS-CC-CHHHHHHHHHHHHHT--CS---CCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHH
T ss_pred hhecccCCC-CC-CChHHHHHHHHhhhc--CC---CCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHH
Confidence 677776554 44 357777777777642 11 222234455555554443 22221 13456666667898
Q ss_pred HHHHHh-----hcCCCCEEEEeCcccHHHHHHHHhc--CCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccE
Q psy15447 154 ASAIAA-----YVKRNDAVFVDENINFAIQTGLIAS--RCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKK 219 (457)
Q Consensus 154 ~~ai~a-----~~~~gd~v~~~~~~h~~~~~~~~~~--g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~ 219 (457)
..++.+ ++++||.|++..++|..+.....+. |.+++.++. .|++++++.+. .+++
T Consensus 179 ~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-----------~~~k 247 (546)
T 2zy4_A 179 AYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKD-----------PAIK 247 (546)
T ss_dssp HHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGS-----------TTEE
T ss_pred HHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhC-----------CCCe
Confidence 888877 5789999999999999888776554 467777653 36777766542 3457
Q ss_pred EEEEecCCCCCCCCCC---hHHHHHHH--HHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc
Q psy15447 220 FIIVEGVYMNSADICP---LKDILSLR--SKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG 294 (457)
Q Consensus 220 ~vi~e~v~~~~G~i~~---l~~i~~l~--~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g 294 (457)
+|++++++||+|.+.+ +++|.++| ++||+++|+||+|+....+ ...+... .+ +.+|++.||||.+|.+|
T Consensus 248 ~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~--~~s~~~~---~~-~~~i~~~S~SK~~g~~G 321 (546)
T 2zy4_A 248 IFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD--FQSLFAI---CP-ENTLLVYSFSKYFGATG 321 (546)
T ss_dssp EEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT--CCCHHHH---CG-GGEEEEEESTTTTTCGG
T ss_pred EEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc--CcCHHHh---CC-CCEEEEEeCccccCCCC
Confidence 7777799999999998 56788998 7899999999999854332 2222221 12 34699999999998666
Q ss_pred ---cEEEecHH-HHHHHHhhC------------Cc----------------------ceecCCCcHHHH-HHHHHH-HHH
Q psy15447 295 ---GFCVGSSY-IIEHHRLSG------------SG----------------------YCFSASLPPFLA-VAANKA-LHL 334 (457)
Q Consensus 295 ---G~v~~~~~-~~~~~~~~~------------~~----------------------~~~~~~~~~~~~-aaa~a~-l~~ 334 (457)
||++++++ +++.+.... .. ...+.+.+.+.. ++++.+ ...
T Consensus 322 lRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~al 401 (546)
T 2zy4_A 322 WRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFAL 401 (546)
T ss_dssp GCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHH
T ss_pred cceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHH
Confidence 99998875 766652110 00 011122333333 322211 223
Q ss_pred HhhC----cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCc----chHH-H----H-HHHHHHHHHH
Q psy15447 335 LKAN----PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD----DEVA-S----K-KLLQTICDMC 400 (457)
Q Consensus 335 ~~~~----~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~-~----~-~~~~~~~~~l 400 (457)
+++. .++++.++++.+.+.+.|.. ++.+..+..+.++++.+..-. .... . . .....+.+.+
T Consensus 402 l~~~~~~~~~~r~~~~~r~~~l~~~L~~-----~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll 476 (546)
T 2zy4_A 402 MDEADEYKHTLKQLIRRRETTLYRELGM-----PPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIA 476 (546)
T ss_dssp HCTTCHHHHHHHHHHHHHHHHHHGGGTS-----SCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHhcCC-----CcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHH
Confidence 3322 23456666677777666632 233332345666677764200 0000 0 0 0123456677
Q ss_pred HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 401 IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 401 ~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
.++||.+.++..+. ...+++|+++. ..+++++++++++|++++++..
T Consensus 477 ~~~gV~v~pG~~F~----~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~~~ 523 (546)
T 2zy4_A 477 DETGIVLLPGRGFG----SNRPSGRASLA-NLNEYEYAAIGRALRKMADELY 523 (546)
T ss_dssp HHHSCCCEESSCTT----CSSCEEEEESS-SSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCEEEeCccccC----CCCCeEEEEec-cCCHHHHHHHHHHHHHHHHHHH
Confidence 78899999887542 23578999997 4689999999999999887654
No 228
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.88 E-value=9.7e-21 Score=189.74 Aligned_cols=322 Identities=16% Similarity=0.143 Sum_probs=202.0
Q ss_pred eEEeecCCccCCCCChhhHHHHH---HHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcE--EEecccHHHHHHH
Q psy15447 82 CINFATHNYLSFVENPDIEKCAI---DCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEET--ALYSFGFSTSASA 156 (457)
Q Consensus 82 ~id~~s~~~l~~~~~p~i~~a~~---~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~--i~~~sG~~a~~~a 156 (457)
++++.+.++.+.. .|+..+++. +.+..| ++..+....|..+...++++.+++++|.+.. +++++|+.+++.+
T Consensus 65 ~~~~~~~g~~~~~-~p~~v~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~ 141 (438)
T 1wyu_A 65 HKAFLGGGVRSHH-VPPVVQALAARGEFLTAY--TPYQPEVSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGV 141 (438)
T ss_dssp TTCCCCSSCCCCC-CCHHHHHHHTSHHHHHCC--SCCSGGGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHH
T ss_pred cccccCCCccCCc-CcHHHHHHHhcchhhhcC--CCCcchhhhhHHHHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHH
Confidence 4445444433332 455545443 232333 2211233456678899999999999998754 5666666443433
Q ss_pred HHh-hcCCCCEEEEeCcccHHHHHHHH----hcCCeEEEecCCC-HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447 157 IAA-YVKRNDAVFVDENINFAIQTGLI----ASRCKVQYFKHNN-MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS 230 (457)
Q Consensus 157 i~a-~~~~gd~v~~~~~~h~~~~~~~~----~~g~~~~~~~~~d-~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~ 230 (457)
+.+ ..++||.|+++.+.|.++...++ ..|.+++.++..+ .-++++ + . +++++|+++++ |++
T Consensus 142 ~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~~~~~~d~~~-i---~--------~~t~~v~i~~p-n~t 208 (438)
T 1wyu_A 142 LLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGGRTPLPE-V---G--------EEVGAVVVQNP-NFL 208 (438)
T ss_dssp HHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTTBCCCCC-C---C--------TTEEEEEEESS-CTT
T ss_pred HHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcCcCCccCHHH-h---C--------CCeEEEEEECC-CCC
Confidence 332 24789999999999999886653 4788888887421 001111 2 1 35678888888 899
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcC-cccccccCCCCccccccCCCCCCccEEEecCccc------ccC-cccEEEecHH
Q psy15447 231 ADICPLKDILSLRSKYQARIFVDES-VSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHA------LGS-VGGFCVGSSY 302 (457)
Q Consensus 231 G~i~~l~~i~~l~~~~g~~li~DEa-~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~------lg~-~gG~v~~~~~ 302 (457)
|.+.|+++|.++|++||+++|+|.. +++|.+.. ...+ ++|++++| +|. +++ .+|+++++++
T Consensus 209 G~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~-----~~~~-----g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~ 277 (438)
T 1wyu_A 209 GALEDLGPFAEAAHGAGALFVAVADPLSLGVLKP-----PGAY-----GADIAVGD-GQSLGLPMGFGGPHFGFLATKKA 277 (438)
T ss_dssp SBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCC-----HHHH-----TCSEEEEE-CTTTTCCCGGGCSCCEEEEECGG
T ss_pred eEEecHHHHHHHHHHcCCEEEEEechhhccCcCC-----CccC-----CCCEEEEC-CcccCCCccCCCCCeeEEEEcHH
Confidence 9999999999999999999997743 55544321 1122 34788888 554 333 3489999988
Q ss_pred HHHHHHhhC----------Cccee------------cCC--C---cHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHH
Q psy15447 303 IIEHHRLSG----------SGYCF------------SAS--L---PPFLAVAANKALHLLKA--NPSLLTKLREKCNTMH 353 (457)
Q Consensus 303 ~~~~~~~~~----------~~~~~------------~~~--~---~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~ 353 (457)
+++.+.... ..+.+ .++ . +.+.+.++...+..+.. .++..++.+++++++.
T Consensus 278 ~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~ 357 (438)
T 1wyu_A 278 FVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLH 357 (438)
T ss_dssp GGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 766542110 00111 011 1 22222222122433322 2356778889999999
Q ss_pred HHhhcccccCCeEEeccCC-CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeE--eccccCccccCCCCCeEEEEecC
Q psy15447 354 SLLSQHKVTQRFLVQGHRD-TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAI--TCPSHLDQEAKKQKPSIRITCNI 430 (457)
Q Consensus 354 ~~L~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v--~~~~~~~~~~~~~~~~lRi~~~~ 430 (457)
+.|++ ++|+++..+.. ..++.+.++ . ...+++++|.++||.+ .+..++ .++++|++++.
T Consensus 358 ~~L~~---~~g~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~L~~~gi~v~~~~~~~~------~~~~lRis~~~ 419 (438)
T 1wyu_A 358 ALLLE---VPGVRPFTPKPFFNEFALALP--K-------DPEAVRRALAERGFHGATPVPREY------GENLALFAATE 419 (438)
T ss_dssp HHHTT---STTCEECSCSSBCSEEEEECS--S-------CHHHHHHHHHHTTCCCCEECCTTS------CSSEEEEECCT
T ss_pred HHHhc---CCCeEECCCCCeEEEEEEeCC--C-------CHHHHHHHHHHCCceecccccccc------CCCeEEEEecc
Confidence 99998 45888864321 222334332 2 3457999999999998 444321 25799999999
Q ss_pred CCCHHHHHHHHHHHHHHH
Q psy15447 431 SHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 431 ~~t~edi~~~~~~l~~~~ 448 (457)
.+|++|+++++++|++++
T Consensus 420 ~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 420 LHEEEDLLALREALKEVL 437 (438)
T ss_dssp TCCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHHh
Confidence 999999999999998764
No 229
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.87 E-value=2.9e-21 Score=192.68 Aligned_cols=322 Identities=11% Similarity=0.019 Sum_probs=215.0
Q ss_pred CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcc-cChHHHHHHHHHHHhhcC--------CCcEEEecc
Q psy15447 78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFY-GTNVVHLDLENDIASFMG--------LEETALYSF 148 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~-g~~~~~~~l~~~la~~~g--------~~~~i~~~s 148 (457)
+.+..+||..+.+ .+..++.+.+++.+.+...+....++.... | .....+|++.++++++ .+.++++++
T Consensus 54 ~~~~~i~l~~g~~-~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G-~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G 131 (427)
T 2hox_A 54 IQGCSADVASGDG-LFLEEYWKQHKEASAVLVSPWHRMSYFFNPVS-NFISFELEKTIKELHEVVGNAAAKDRYIVFGVG 131 (427)
T ss_dssp CTTCCEECCSCCC-GGGHHHHTTSHHHHCEEECTTTTCSSSCSSCC-TTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESH
T ss_pred CCCceEEecCcCC-CCCCCHHHHHhHHhhhhcCCcccccCCCCCCC-ccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCC
Confidence 4556788877654 333345677777766643332211121112 3 1124567777777664 245677777
Q ss_pred cHHHHHHHHHhh--------cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEE
Q psy15447 149 GFSTSASAIAAY--------VKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKF 220 (457)
Q Consensus 149 G~~a~~~ai~a~--------~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~ 220 (457)
+++++..++.++ +++||.|+++.++|..+...++..|.++..+. .|+++|++.+. +++++
T Consensus 132 ~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~-~d~~~l~~~~~-----------~~~k~ 199 (427)
T 2hox_A 132 VTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVWA-GNAANYVNVSN-----------PEQYI 199 (427)
T ss_dssp HHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEEE-EEGGGGTTCSC-----------GGGEE
T ss_pred HHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeeec-CCHHHHHHhhc-----------CCceE
Confidence 789999999999 89999999999999999999999888776654 36777766553 24567
Q ss_pred EEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEE
Q psy15447 221 IIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFC 297 (457)
Q Consensus 221 vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v 297 (457)
|++.+++||+|.+.+ + +++ ++..+.|+++- .+ ...+ ..+. .+.||+++||||.+|.+| ||+
T Consensus 200 v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~----~~-~~s~---~~~~-~~~~i~~~S~SK~~g~~G~RiG~~ 263 (427)
T 2hox_A 200 EMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYY----WP-HYTP---IKYK-ADEDILLFTMSKFTGHSGSRFGWA 263 (427)
T ss_dssp EEEESSCTTTCCCCC-C----SST--TCEEEEECTTC----ST-TTSC---CCSC-BCCSEEEEEHHHHTSCGGGCCEEE
T ss_pred EEEcCCCCCcccccH-H----HHc--CCCEEEeeccc----CC-CCCc---cccC-CCceEEEEeChhcCCCCCceEEEE
Confidence 788899999999999 4 333 56788998752 11 1111 1222 345799999999998666 999
Q ss_pred Ee-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh---------C---cHHHHHHHHHHHHHHHHhhcccccCC
Q psy15447 298 VG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA---------N---PSLLTKLREKCNTMHSLLSQHKVTQR 364 (457)
Q Consensus 298 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~---------~---~~~~~~l~~~~~~l~~~L~~~~~~~~ 364 (457)
++ ++++++.++..... ...+.+++...++.++|+...+ . .+.+++++++.+++.+.|++ .+|
T Consensus 264 ~~~~~~l~~~l~~~~~~--~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~g 338 (427)
T 2hox_A 264 LIKDESVYNNLLNYMTK--NTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQ---SDR 338 (427)
T ss_dssp EECCHHHHHHHHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTT---SSS
T ss_pred EECCHHHHHHHHHHHHh--cCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHh---CcC
Confidence 98 58888887654321 1223466666666666654210 1 23567888899999999988 346
Q ss_pred eEE--------------eccCCCCeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEec
Q psy15447 365 FLV--------------QGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCN 429 (457)
Q Consensus 365 ~~~--------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~ 429 (457)
+.+ ..+..+.++++.+..+ ..++++.|+ ++||.++++..+. ...+++|+++.
T Consensus 339 ~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~~---------~~~~~~~ll~~~gI~v~pg~~f~----~~~~~~Ris~~ 405 (427)
T 2hox_A 339 FSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWE---------EDKDCYQTFQNGRINTQNGVGFE----ASSRYVRLSLI 405 (427)
T ss_dssp EECCCCCSCEEETTTTEEECCCCSEEEEEECSG---------GGCSHHHHHHHTTEECEEGGGGT----SCTTEEEEECS
T ss_pred ccccccccccccccccccCCCCceEEEEECCCc---------HHHHHHHHHHHCCEEEcCCCccC----CCCCEEEEEec
Confidence 554 1233467788887642 124666765 7899999875431 13579999997
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q psy15447 430 ISHTEQDMNSLIETLCKSHD 449 (457)
Q Consensus 430 ~~~t~edi~~~~~~l~~~~~ 449 (457)
. ++++++++++.|+++++
T Consensus 406 ~--~~e~l~~~l~~l~~~~~ 423 (427)
T 2hox_A 406 K--TQDDFDQLMYYLKDMVK 423 (427)
T ss_dssp S--CHHHHHHHHHHHHHHHT
T ss_pred C--CHHHHHHHHHHHHHHHh
Confidence 4 89999999999988763
No 230
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.86 E-value=2.8e-20 Score=183.92 Aligned_cols=338 Identities=12% Similarity=0.019 Sum_probs=199.9
Q ss_pred CCeeeEEeecCCccCCCCC----hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-Cc--EEEecccH
Q psy15447 78 NGIPCINFATHNYLSFVEN----PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-EE--TALYSFGF 150 (457)
Q Consensus 78 ~G~~~id~~s~~~l~~~~~----p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~~--~i~~~sG~ 150 (457)
|+++-||++-+.|.+-.++ |.|++|..+.++. +... .+....|..++.+.+.+.+-.-... +. .+-+.+|+
T Consensus 42 d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~-~~~~-~Y~p~~G~p~lr~aia~~~~g~~~~~~~~~~~qt~ggt 119 (420)
T 4h51_A 42 AKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDM-NLDY-EYLPISGYQPFIDEAVKIIYGNTVELENLVAVQTLSGT 119 (420)
T ss_dssp CCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHT-TCCC-CCCCTTCCHHHHHHHHHHHHC---CGGGEEEEEEEHHH
T ss_pred CCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcC-CCCC-CCCCcCChHHHHHHHHHHhcCCCccccccceeeecCch
Confidence 3445678776655443333 4567776655544 2211 1223345555544444333111111 12 23456777
Q ss_pred HHHHHHHH----hhcCCCCEEEEeCcccHHHHHHHHhcCCe-EEEecCC-------CHHHHHHHHHhhchhcccCCCCcc
Q psy15447 151 STSASAIA----AYVKRNDAVFVDENINFAIQTGLIASRCK-VQYFKHN-------NMQHLEELLRQQDERDTLNSKVTK 218 (457)
Q Consensus 151 ~a~~~ai~----a~~~~gd~v~~~~~~h~~~~~~~~~~g~~-~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~ 218 (457)
.|+..++. ++..+||.|+++.+++..+...++..|.+ +..+++. |.+.+.+.++... ++.
T Consensus 120 ga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~--------~~~ 191 (420)
T 4h51_A 120 GAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAP--------DGS 191 (420)
T ss_dssp HHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEECHHHHHHHHHHSC--------SSC
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeeccccccccCCCHHHHHHHHhccC--------CCc
Confidence 77665554 45679999999999999999889999875 4444322 6777777776543 566
Q ss_pred EEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccccCCCCCCccEEEecCcccccCcc
Q psy15447 219 KFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYFGVSTEEVDMIIGSLEHALGSVG 294 (457)
Q Consensus 219 ~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~~~~~~~~Di~~~s~sK~lg~~g 294 (457)
++++..+++||||...+ +++|.++|+++++++|.||+|....+|...... ......+....-+++.||||.++..|
T Consensus 192 ~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G 271 (420)
T 4h51_A 192 VFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYS 271 (420)
T ss_dssp EEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGG
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEecccccccccc
Confidence 78888999999999988 779999999999999999998754444211100 00000000112478899999998766
Q ss_pred ---cEEEecHHHHHHH-------HhhCCcceecCCCcHHHHHHHHHHHHH-------HhhCcHHHHHHHHHHHHHHHHhh
Q psy15447 295 ---GFCVGSSYIIEHH-------RLSGSGYCFSASLPPFLAVAANKALHL-------LKANPSLLTKLREKCNTMHSLLS 357 (457)
Q Consensus 295 ---G~v~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~aaa~a~l~~-------~~~~~~~~~~l~~~~~~l~~~L~ 357 (457)
|++++.....+.. .... ...++ +.+...+.++...+.. .++...++++++++++.+.+.|+
T Consensus 272 ~RvG~~~~~~~~~~~~~~~~~~l~~~~-r~~~s-~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~ 349 (420)
T 4h51_A 272 ERAGTLSLLLKDKTKRADVKSVMDSLI-REEYT-CPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELL 349 (420)
T ss_dssp GCEEEEEEECSCHHHHHHHHHHHHHHH-HTTTS-SCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEecccCHHHHHHHHHHHHHhh-hcccC-cchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877653322221 1111 11222 2344444444333321 11223567788888999999998
Q ss_pred cccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHH
Q psy15447 358 QHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDM 437 (457)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi 437 (457)
++..-..+....++.|.+.++.+ .. +.++.|.++||++.+. -||+++. .+++.|
T Consensus 350 ~~g~~~~~~~i~~q~GmF~~~gl--s~----------e~v~~L~e~~Vy~~~~-------------gRis~Ag-l~~~ni 403 (420)
T 4h51_A 350 RLQTPGSWEHVINQIGMFSFLGL--SK----------AQCEYCQNHNIFITVS-------------GRANMAG-LTHETA 403 (420)
T ss_dssp HTTCSSCCTHHHHCCSSEEECCC--CH----------HHHHHHHHTTEECCTT-------------CEEEGGG-CCHHHH
T ss_pred HhCCCCCCCeecCCCceEEecCc--CH----------HHHHHHHhCCEEEcCC-------------CEEEecc-CCHHHH
Confidence 73211112222344565544322 21 2356788899987642 2888854 789999
Q ss_pred HHHHHHHHHHHHHhcC
Q psy15447 438 NSLIETLCKSHDIAVQ 453 (457)
Q Consensus 438 ~~~~~~l~~~~~~~~~ 453 (457)
++++++|.++++++.+
T Consensus 404 ~~~a~aI~~vvr~i~r 419 (420)
T 4h51_A 404 LMLAQTINDAVRNVNR 419 (420)
T ss_dssp HHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHhhc
Confidence 9999999999987754
No 231
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.86 E-value=9.3e-21 Score=184.22 Aligned_cols=315 Identities=10% Similarity=0.033 Sum_probs=205.8
Q ss_pred CChhhHHHHHHHHHhcCC-CCCC---CCCcccChHHHHHHHHHHHhhcCCC---cEEEe-cccHHHHHHHHHhhcCC--C
Q psy15447 95 ENPDIEKCAIDCIDKNGV-GSCG---PRGFYGTNVVHLDLENDIASFMGLE---ETALY-SFGFSTSASAIAAYVKR--N 164 (457)
Q Consensus 95 ~~p~i~~a~~~~l~~~~~-~~~~---~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~-~sG~~a~~~ai~a~~~~--g 164 (457)
-+++|.+++.+.+.++.- +.+. +....-..+..++.++.++++++.+ +++|+ ++|++++..++..+..+ |
T Consensus 24 ~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~~~~G 103 (377)
T 3e77_A 24 LPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAG 103 (377)
T ss_dssp CCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGGGSTT
T ss_pred CCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccCCCCC
Confidence 368899999988865432 1111 0000112467788899999999975 35664 58889999999888764 8
Q ss_pred CEEEEeCcccHHHH--HHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChH
Q psy15447 165 DAVFVDENINFAIQ--TGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLK 237 (457)
Q Consensus 165 d~v~~~~~~h~~~~--~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~ 237 (457)
|.+++-...|.+.. ..++..|..+..++.+ ++++++..+ .+++++|.+.+..+.+|.+.|+
T Consensus 104 d~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i-----------~~~t~lV~~~h~et~tG~~~pi- 171 (377)
T 3e77_A 104 RCADYVVTGAWSAKAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNL-----------NPDASYVYYCANETVHGVEFDF- 171 (377)
T ss_dssp CEEEECCCSHHHHHHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCC-----------CTTCSCEEEESEETTTTEECSS-
T ss_pred CeEEEEECCHHHHHHHHHHHHhCCceEEeccCCCcCCCCChHHhcc-----------CCCccEEEEeCccCchheEchh-
Confidence 87765544443321 2233446555544432 334333222 1345677777777778999998
Q ss_pred HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHh-------
Q psy15447 238 DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRL------- 309 (457)
Q Consensus 238 ~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~------- 309 (457)
+|+++|+++++|.++++|... ++.++.|+++.|.+|++|+.| |+++.++++.+.+..
T Consensus 172 ----i~~~~~~~~~vD~~q~~g~~~-----------id~~~~~~~~~s~~K~~gp~G~g~l~~~~~~l~~~~~~~p~~~~ 236 (377)
T 3e77_A 172 ----IPDVKGAVLVCDMSSNFLSKP-----------VDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLE 236 (377)
T ss_dssp ----CCCCTTCCEEEECTTTTTSSC-----------CCGGGCSEEEEEGGGTTSCTTCEEEEEETTSCSCCCTTSCGGGC
T ss_pred ----hhccCCCEEEEEcccccCCCC-----------CchhhcCEEEEecccccCCCccEEEEEcHHHHhhccCCCCchhh
Confidence 588999999999999987542 222334567889999999766 777777665322211
Q ss_pred ----hCCcceecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEec-c--CCCC-eEEE
Q psy15447 310 ----SGSGYCFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQG-H--RDTP-LKYL 378 (457)
Q Consensus 310 ----~~~~~~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~-~--~~~~-~~~i 378 (457)
......+ ++++....++..++++++.+. +.+.++.+++.+++++.|++ ++|+.+.. + ..++ ++.+
T Consensus 237 ~~~~~~~~~~~-~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~---~~g~~~~~~~~~~rs~~ivsf 312 (377)
T 3e77_A 237 YKVQAGNSSLY-NTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDN---SQGFYVCPVEPQNRSKMNIPF 312 (377)
T ss_dssp HHHHHTTTTCS-SCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT---STTSEECCSCGGGBCSSEEEE
T ss_pred HHHHhhcCCCC-CCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh---cCCceecCCCHHHcCCcEEEE
Confidence 0111112 244556666667888887654 56778899999999999998 45776432 1 2244 5777
Q ss_pred EecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 379 YLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
.+++.... ......+.+.+.++||.++++.. ..+.+|+++...+|++|||+++++|+++.++
T Consensus 313 ~~~~~~~~---~~~~~~~l~~l~~~Gi~~~~g~~-------~~g~iRiS~~~~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 313 RIGNAKGD---DALEKRFLDKALELNMLSLKGHR-------SVGGIRASLYNAVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp EESSTTCC---HHHHHHHHHHHHHTTEESCBCCT-------TTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCCc---hhHHHHHHHHHHHCCcEEeCCCC-------cCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 77752100 00123577888889998866532 1356999999999999999999999998765
No 232
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.85 E-value=3.7e-19 Score=172.35 Aligned_cols=303 Identities=13% Similarity=0.056 Sum_probs=202.8
Q ss_pred ChhhHHHHHHHHHhcCC-CCC----CCCCcccChHHHHHHHHHHHhhcCCC---cEEE-ecccHHHHHHHHHhhcCCCCE
Q psy15447 96 NPDIEKCAIDCIDKNGV-GSC----GPRGFYGTNVVHLDLENDIASFMGLE---ETAL-YSFGFSTSASAIAAYVKRNDA 166 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~~-~~~----~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~-~~sG~~a~~~ai~a~~~~gd~ 166 (457)
+|+|.+++.+.+..+.. +.+ +.+. .-..+..++.++.++++++.+ +++| +++|++++..++..+. ++|.
T Consensus 17 ~~~V~~a~~~~~~~~~~~~~s~~~~~hr~-~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~n~~~~~~~-~~~~ 94 (361)
T 3m5u_A 17 PLEILEQAQKELCDYQGRGYSIMEISHRT-KVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMIPMNLA-LNGV 94 (361)
T ss_dssp CHHHHHHHHHTSSSGGGSSSCGGGSCSSS-HHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHC-CSSC
T ss_pred cHHHHHHHHHHHHhcccCCceeeccCCCC-HHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHHHHHHHhcC-CCCe
Confidence 58899999888765421 111 1111 112467788899999999974 4565 5788899999998888 6763
Q ss_pred E--EE-eCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCCh
Q psy15447 167 V--FV-DENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPL 236 (457)
Q Consensus 167 v--~~-~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l 236 (457)
+ ++ ....|.+.. .++..|.++..++.+ +++. + |. +++++|.+.+..+.+|.+.|.
T Consensus 95 ~~~i~~~~~~~~~~~-~a~~~G~~v~~~~~~~~g~~~~~~~~-~--l~-----------~~t~lv~~~~~e~~tG~~~~~ 159 (361)
T 3m5u_A 95 CEYANTGVWTKKAIK-EAQILGVNVKTVASSEESNFDHIPRV-E--FS-----------DNADYAYICSNNTIYGTQYQN 159 (361)
T ss_dssp EEEEECSHHHHHHHH-HHHHTTCCEEEEEECTTTTSCSCCCC-C--CC-----------TTSSEEEEESEETTTTEECSS
T ss_pred EEEEeCCHHHHHHHH-HHHHcCCceEEEecccCcCCCcCChh-h--cC-----------CCCCEEEEeCCCCCcceeCCc
Confidence 2 22 223343332 234456666655432 2333 2 21 345677777777778998662
Q ss_pred HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHh-hC---
Q psy15447 237 KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRL-SG--- 311 (457)
Q Consensus 237 ~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~-~~--- 311 (457)
+++ +|+++++|.++++|.. .++.+++|+++.|.+|++|+.| |+++.++++.+.+.. ..
T Consensus 160 -----i~~-~~~~~~vD~~q~~g~~-----------~id~~~~d~~~~s~~K~~gp~G~g~l~~~~~~~~~~~~~~~p~~ 222 (361)
T 3m5u_A 160 -----YPK-TKTPLIVDASSDFFSR-----------KVDFSNIALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPSM 222 (361)
T ss_dssp -----CCC-CSSCEEEECGGGTTSS-----------CCCCTTEEEEEEETTTTSSCTTCEEEEEEHHHHHHHHTCCCCGG
T ss_pred -----ccc-cCCEEEEEcccccCCC-----------CCCcccCCEEEEechhccCCCccEEEEEcHHHHhhhcCCCCCce
Confidence 444 4999999999998754 2223457999999999999776 889999888776643 11
Q ss_pred --------CcceecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCe-EEecc--CC-CCeE
Q psy15447 312 --------SGYCFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRF-LVQGH--RD-TPLK 376 (457)
Q Consensus 312 --------~~~~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~-~~~~~--~~-~~~~ 376 (457)
....+ ++++.....+..++++++.+. +.+.++.+++.+++++.|++ +.++ .+..+ .. ..++
T Consensus 223 ~~~~~~~~~~~~~-~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~---~~g~~~~~~~~~~rs~~iv 298 (361)
T 3m5u_A 223 LNYLTHAENQSLF-NTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDL---SNGFYKGHADKKDRSLMNV 298 (361)
T ss_dssp GCHHHHHHTTTCS-SCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHT---STTSEEESSCGGGBCSSEE
T ss_pred eehHHHhhcCCCC-CCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH---CCCeeeccCCHHHcCCeEE
Confidence 11111 244666666677889887654 45778899999999999988 3444 44322 12 3467
Q ss_pred EEEecC-CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 377 YLYLQK-SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 377 ~i~~~~-~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
.+.+++ .. ...++.+.|.++||.++.+... .+.+|+++...+|++|||+++++|+++.++
T Consensus 299 sf~~~~~~~-------~~~~~~~~L~~~gI~~~~g~~~-------~g~iRiS~~~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 299 SFNIAKNKD-------LEPLFVKEAEEAGMIGLKGHRI-------LGGIRASIYNALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp EEEESSCTT-------HHHHHHHHHHHTTEECCBCCTT-------TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEECCCchh-------hhHHHHHHHHHCCCEEecCCCc-------cCeEEEEccCCCCHHHHHHHHHHHHHHHHh
Confidence 777775 21 1136778888999998765431 256999999999999999999999998765
No 233
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.82 E-value=6e-20 Score=179.50 Aligned_cols=307 Identities=11% Similarity=0.050 Sum_probs=191.6
Q ss_pred ChhhHHHHHHHHHhcC-CCCC----CCCCcccChHHHHHHHHHHHhhcCCC---cEEEe-cccHHHHHHHHHhhcCCCCE
Q psy15447 96 NPDIEKCAIDCIDKNG-VGSC----GPRGFYGTNVVHLDLENDIASFMGLE---ETALY-SFGFSTSASAIAAYVKRNDA 166 (457)
Q Consensus 96 ~p~i~~a~~~~l~~~~-~~~~----~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~-~sG~~a~~~ai~a~~~~gd~ 166 (457)
+|+|.+++.+.+.++. .+.+ +.+. .-..+..++.++.+++++|.+ +++|+ ++|++++..++..+.++||.
T Consensus 39 p~~V~~a~~~~~~~~~~n~~s~~~~~h~~-~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~~gd~ 117 (386)
T 3qm2_A 39 PAEVLKLAQQELCDWHGLGTSVMEISHRG-KEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTT 117 (386)
T ss_dssp CHHHHHHHTCC------------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCTTCCE
T ss_pred CHHHHHHHHHHHHhccccCccccccCCCC-HHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccCCCCe
Confidence 5889998887776532 1111 0111 112456678899999999975 35663 68999999999999899997
Q ss_pred EEEeCcccHHH--HHHHHhcCCeEEEecCC--------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC-CC
Q psy15447 167 VFVDENINFAI--QTGLIASRCKVQYFKHN--------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI-CP 235 (457)
Q Consensus 167 v~~~~~~h~~~--~~~~~~~g~~~~~~~~~--------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i-~~ 235 (457)
+++-...|.+. ...++..| .+..++.+ ++++++..+. +++++|.+.+..+.+|.+ .|
T Consensus 118 v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~-----------~~t~lV~~~h~et~tG~~i~p 185 (386)
T 3qm2_A 118 ADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLS-----------DNAAYLHYCPNETIDGIAIDE 185 (386)
T ss_dssp EEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCC-----------TTCSCEEECSEETTTTEECCC
T ss_pred EEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcC-----------CCCcEEEEECCcCCcCEecCc
Confidence 65332222221 12233345 66555432 3344443332 345677777777788995 89
Q ss_pred hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHh-----
Q psy15447 236 LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRL----- 309 (457)
Q Consensus 236 l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~----- 309 (457)
+++|. +|+++++|.++++|... ++.++.|+++.|.+|++|+.| |+++.++++.+.+..
T Consensus 186 i~~i~-----~g~~~~vDa~qs~g~~p-----------idv~~~~~~~~s~hK~lGP~G~g~l~v~~~~~~~~~~~~p~~ 249 (386)
T 3qm2_A 186 TPDFG-----PEVVVTADFSSTILSAP-----------LDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSI 249 (386)
T ss_dssp CCCCC-----TTCCEEEECTTTTTSSC-----------CCGGGCSEEEEETTTTTCCTTEEEEEEEGGGCSCCCTTSCGG
T ss_pred hhhhc-----CCCEEEEEcccccCCCC-----------CCccccCEEEEecccccCCCccEEEEECHHHHhhhcccCCcH
Confidence 88875 89999999999987542 222333566789999999776 788887765332111
Q ss_pred ------hCCcceecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCe-EEecc--CCC-CeE
Q psy15447 310 ------SGSGYCFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRF-LVQGH--RDT-PLK 376 (457)
Q Consensus 310 ------~~~~~~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~-~~~~~--~~~-~~~ 376 (457)
...+..+. +.|....++..++++++.+. +...++.+++.+++++.|++ .++ ....+ ..+ .++
T Consensus 250 ~~~~~~~~~~~~~g-Tp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~----~~~~~~~~~~~~rs~~iv 324 (386)
T 3qm2_A 250 LDYTVLNDNDSMFN-TPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDN----SDFYRNDVAQANRSRMNV 324 (386)
T ss_dssp GCHHHHHHC--------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHT----CSSEECCBCGGGBCSSEE
T ss_pred HHHHHHhhcCCCCC-CCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCHHHcCceEE
Confidence 00111222 23444445556677766543 45778889999999999988 343 22111 223 467
Q ss_pred EEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447 377 YLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI 450 (457)
Q Consensus 377 ~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 450 (457)
.+.+++.. . . ..+.+.|.++||.++.+..+ .+.+|+++...+|++|||+++++|+++.++
T Consensus 325 ~f~~~~~~-~-----~-~~~~~~L~~~gI~~~~g~~~-------~~~iRiS~~~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 325 PFQLADNT-L-----D-KVFLEESFAAGLHALKGHRV-------VGGMRASIYNAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp EEEESSGG-G-----H-HHHHHHHHHTTEECCBCCTT-------TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEECCCcc-c-----c-HHHHHHHHHCCCEEeCCCCC-------cCeEEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 77776421 0 2 46777788999988765432 246999999999999999999999998765
No 234
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.82 E-value=2.9e-18 Score=165.37 Aligned_cols=326 Identities=11% Similarity=0.069 Sum_probs=199.7
Q ss_pred ChhhHHHHHHHHH-hcCCCCCCCCCcccC--hHHHHHHHH-HHHhhcCCCcE-----EEecccHHHHHHHHHhhcCCCCE
Q psy15447 96 NPDIEKCAIDCID-KNGVGSCGPRGFYGT--NVVHLDLEN-DIASFMGLEET-----ALYSFGFSTSASAIAAYVKRNDA 166 (457)
Q Consensus 96 ~p~i~~a~~~~l~-~~~~~~~~~~~~~g~--~~~~~~l~~-~la~~~g~~~~-----i~~~sG~~a~~~ai~a~~~~gd~ 166 (457)
+|.+.+|.-..+. +|.-++.+-|.+.|. .+..+.|+. +..++||.+.+ +-..||+.||.+++.++++|||.
T Consensus 67 S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ 146 (490)
T 3ou5_A 67 SRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDR 146 (490)
T ss_dssp CHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCC
T ss_pred CHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCE
Confidence 5788888766664 576677666665443 233344433 34458898754 55579999999999999999999
Q ss_pred EEEeCcccHHHHH--------HHHhcCC--eEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447 167 VFVDENINFAIQT--------GLIASRC--KVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS 230 (457)
Q Consensus 167 v~~~~~~h~~~~~--------~~~~~g~--~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~ 230 (457)
|+.-+..|+..+. .+..+|. +...++. .|.+.+++..++.+ +++|++-... .
T Consensus 147 ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~k----------PklIi~G~Sa--Y 214 (490)
T 3ou5_A 147 IMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFR----------PRLIIAGTSA--Y 214 (490)
T ss_dssp EECBC----------------------------CBCEETTTTEECHHHHHHHHHHHC----------CSEEEECCSS--C
T ss_pred EEecccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHHHHHHhhcC----------CCeEEECCcc--C
Confidence 9987776655432 1222332 1222211 28999999888754 3577764322 2
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEecH--------
Q psy15447 231 ADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGSS-------- 301 (457)
Q Consensus 231 G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~~-------- 301 (457)
-...|++++++||++.|++|++|-+|-.|..-. |. +..- + ...|++++|.||+| |+.||.+.+++
T Consensus 215 ~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~-g~-~psP--~--~~ADvVTtTTHKTLrGPrGG~Il~~~~~~~~~~k 288 (490)
T 3ou5_A 215 ARLIDYARMREVCDEVKAHLLADMAHISGLVAA-KV-IPSP--F--KHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPK 288 (490)
T ss_dssp CSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHT-TS-SCCG--G--GTCSEEEEESSSTTCSCSCEEEEEECSEEEECC-
T ss_pred ccccCHHHHHHHHhhcccEEEechhhhhhhhcc-cc-cCCc--c--ccceEEeccccccccCCCceEEEecccccccccc
Confidence 345679999999999999999999997665421 11 1111 1 23599999999999 77899998775
Q ss_pred -------HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-CC
Q psy15447 302 -------YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-RD 372 (457)
Q Consensus 302 -------~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~~ 372 (457)
++.+.+...-.+...++......+|.+.+-.+.+.. ..+..+++.+|++.|.+.|.+ .|+.++.. .+
T Consensus 289 ~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~----~G~~vvsGgTd 364 (490)
T 3ou5_A 289 TGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLE----RGYSLVSGGTD 364 (490)
T ss_dssp -CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH----TTCEEGGGSCS
T ss_pred ccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHh----CCCeeecCCCC
Confidence 345555443333333333333333333333332322 245778899999999999999 89988643 45
Q ss_pred CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecC----CCCHHHHHHHHHHHHHHH
Q psy15447 373 TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNI----SHTEQDMNSLIETLCKSH 448 (457)
Q Consensus 373 ~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~----~~t~edi~~~~~~l~~~~ 448 (457)
++++.+.+.... ....+..+.|.+.||.+....-|....+...+.|||..+. ...++|++++.+.|.+++
T Consensus 365 nHlvLvDl~~~g------~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l 438 (490)
T 3ou5_A 365 NHLVLVDLRPKG------LDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGV 438 (490)
T ss_dssp SSEEEEECGGGT------CCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred ceEEEEeccccC------CCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 788888775421 0234555667778999875554433223345689998753 468899999999998877
Q ss_pred H
Q psy15447 449 D 449 (457)
Q Consensus 449 ~ 449 (457)
.
T Consensus 439 ~ 439 (490)
T 3ou5_A 439 N 439 (490)
T ss_dssp H
T ss_pred H
Confidence 5
No 235
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.76 E-value=1.3e-16 Score=154.62 Aligned_cols=300 Identities=12% Similarity=0.118 Sum_probs=187.7
Q ss_pred cCCCc---EEEecccHHHHHHHHHhhcCC----CCEEEEeCcccHHHHHHHHhcCCeEEEecC--------CCHHHHHHH
Q psy15447 138 MGLEE---TALYSFGFSTSASAIAAYVKR----NDAVFVDENINFAIQTGLIASRCKVQYFKH--------NNMQHLEEL 202 (457)
Q Consensus 138 ~g~~~---~i~~~sG~~a~~~ai~a~~~~----gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~~~le~~ 202 (457)
+|.+. .+++++++.++.+++.+.+++ +|.|++++.+|.+..+++.++|..+++++. .|++.++++
T Consensus 129 ~G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~a 208 (501)
T 3hl2_A 129 AGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAK 208 (501)
T ss_dssp TTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEECHHHHHHH
T ss_pred cCCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccCCCHHHHHHH
Confidence 37553 344555555777766666653 499999999999999999999998877653 279999999
Q ss_pred HHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccc-cccCCCCCCccE
Q psy15447 203 LRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVT-EYFGVSTEEVDM 281 (457)
Q Consensus 203 l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~-~~~~~~~~~~Di 281 (457)
|+++.. +.+.+|++.+.++..+.+.++++|.++|++||+++++||||+.-. .. ...+. +.+.. .++|+
T Consensus 209 I~e~ga-------~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~-~~-~~~lp~sA~~~--GrAD~ 277 (501)
T 3hl2_A 209 VQELGP-------DCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQS-SK-CMHLIQQGARV--GRIDA 277 (501)
T ss_dssp HHHHCG-------GGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTC-HH-HHHHHHHHHHH--SCCCE
T ss_pred HHhcCC-------CcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhh-hh-hhhhHHHHHhc--CCCcE
Confidence 998642 456677777666545577899999999999999999999987422 10 00000 11111 12689
Q ss_pred EEecCccccc-CcccEEE-e-cHHHHHHHHhhCCcceecCCCcHHH-HHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhh
Q psy15447 282 IIGSLEHALG-SVGGFCV-G-SSYIIEHHRLSGSGYCFSASLPPFL-AVAANKALHLLKANPSLLTKLREKCNTMHSLLS 357 (457)
Q Consensus 282 ~~~s~sK~lg-~~gG~v~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~ 357 (457)
++.|.+|.+- ..||.++ . ++++++.+..... ...+..|.. ..+++..+-. +...+++++..++.++|++.|+
T Consensus 278 vVqS~HK~llvpIGG~ii~~~d~e~l~~~~~~yP---Gr~S~Spsldl~~tLL~lGr-~Gy~~ll~e~~ela~~L~~~L~ 353 (501)
T 3hl2_A 278 FVQSLDKNFMVPVGGAIIAGFNDSFIQEISKMYP---GRASASPSLDVLITLLSLGS-NGYKKLLKERKEMFSYLSNQIK 353 (501)
T ss_dssp EEEEHHHHHCCCSSCEEEEESCHHHHHHHHHTSC---SCBCSHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecccccceeecCceEEEeCCHHHHHHHHHhCC---CCCCCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999984 3355443 3 4566666543221 111223332 3333222211 1124577888889999999998
Q ss_pred cccccCCeEEeccCCCCe-EEEEecCCcchHHHHHHHHHHHHHHHHcCee---Eecccc------------CccccCCCC
Q psy15447 358 QHKVTQRFLVQGHRDTPL-KYLYLQKSDDEVASKKLLQTICDMCIQAGFA---ITCPSH------------LDQEAKKQK 421 (457)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~---v~~~~~------------~~~~~~~~~ 421 (457)
++....|-++...+..++ +.+.+...... .......+...|..++|- +.+..- -+.....+.
T Consensus 354 ~la~~~ge~ll~~~~n~is~a~tl~~~~~~--~~~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~ 431 (501)
T 3hl2_A 354 KLSEAYNERLLHTPHNPISLAMTLKTLDEH--RDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPC 431 (501)
T ss_dssp HHHHTTTCCBCCCTTCSSEEEEECTTSCTT--TSCHHHHHHHHHHHTTCCSCEEECTTCCEEETTEEESSTTTTSSCCSS
T ss_pred HHHHhcChhhcCCCCCceeEEEeccccccc--ccccHHHHHHHHHhcCCCcceeecCCCceEECCeeecCcccCCCCCCc
Confidence 855444544443333443 33344322100 001355778888887543 322111 000111235
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447 422 PSIRITCNISHTEQDMNSLIETLCKSHDIAVQP 454 (457)
Q Consensus 422 ~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~ 454 (457)
+++-++....++++|+|.+++.|++++..++.+
T Consensus 432 ~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~ 464 (501)
T 3hl2_A 432 AYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKE 464 (501)
T ss_dssp CEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 789999999999999999999999999887644
No 236
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.75 E-value=5.2e-16 Score=152.54 Aligned_cols=309 Identities=10% Similarity=0.121 Sum_probs=185.6
Q ss_pred HHHHHHHHHHHhhcCCCcE---EEecccHHHHHHHHHhhcC----CCCEEEEeCcccHHHHHHHHhcCCeEEEecC----
Q psy15447 125 VVHLDLENDIASFMGLEET---ALYSFGFSTSASAIAAYVK----RNDAVFVDENINFAIQTGLIASRCKVQYFKH---- 193 (457)
Q Consensus 125 ~~~~~l~~~la~~~g~~~~---i~~~sG~~a~~~ai~a~~~----~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~---- 193 (457)
.....+...+.+++|.+.. ++++++|.++.+++.+.++ +++.|++.+.+|.+..+++.+.|....+++.
T Consensus 98 ~~e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~~~~ 177 (450)
T 3bc8_A 98 KITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEG 177 (450)
T ss_dssp HHHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEET
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEeeecC
Confidence 4445677777777786643 6666666444434333333 3788999999999999999999988776643
Q ss_pred ----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccc
Q psy15447 194 ----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVT 269 (457)
Q Consensus 194 ----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~ 269 (457)
.|++.++++|++... +.+.+|++.+.++..|.+.|+++|.++|++||+++++|+||+... .. ...+.
T Consensus 178 ~~~~id~~~le~aI~~~~~-------~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~-~~-~~~l~ 248 (450)
T 3bc8_A 178 DELRTDLKAVEAKIQELGP-------EHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQS-SK-CMHLI 248 (450)
T ss_dssp TEEECCHHHHHHHHHHHCG-------GGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTC-HH-HHHHH
T ss_pred ccCCcCHHHHHHHHHhcCC-------CCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhh-hh-hHhHH
Confidence 289999999987541 355777777777666789999999999999999999999987421 10 00011
Q ss_pred cccCCCCCCccEEEecCcccccC-cc-cEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHH
Q psy15447 270 EYFGVSTEEVDMIIGSLEHALGS-VG-GFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLR 346 (457)
Q Consensus 270 ~~~~~~~~~~Di~~~s~sK~lg~-~g-G~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~ 346 (457)
. .++....+|+++.|.+|++.. .+ +++.. +++..+.....-.+ ..++.|.+.+++.+.++- .+...+..++..
T Consensus 249 ~-~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~~~~~g--~~s~SpsL~l~~~l~~~G-~~g~~~~i~~~~ 324 (450)
T 3bc8_A 249 Q-QGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKMYPG--RASASPSLDVLITLLSLG-CSGYRKLLKERK 324 (450)
T ss_dssp H-HHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHHHHSCS--CBCSHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred H-HHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHHHHHhhc--CCcccHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 0 011102568999999999964 34 44443 55555555432111 122223333333333220 111123445557
Q ss_pred HHHHHHHHHhhcccccCCeEEeccCCCCe-EEEEecC-----CcchHHHHHHHHHHHHHHHHcC---eeEec--------
Q psy15447 347 EKCNTMHSLLSQHKVTQRFLVQGHRDTPL-KYLYLQK-----SDDEVASKKLLQTICDMCIQAG---FAITC-------- 409 (457)
Q Consensus 347 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~-~~i~~~~-----~~~~~~~~~~~~~~~~~l~~~G---i~v~~-------- 409 (457)
++.+++++.|+++....|..+...+..++ ..+.+.. +. +..++.-.+...| .-+.+
T Consensus 325 ~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~-------D~tkl~i~~~~~g~sG~~v~~~~~~~~~~ 397 (450)
T 3bc8_A 325 EMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDK-------AVTQLGSMLFTRQVSGARAVPLGNVQTVS 397 (450)
T ss_dssp HHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSC-------HHHHHHHHHHHTTCCSCEEECSCCEEEET
T ss_pred HHHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccC-------CCceeEEEecCCCCccceeeecccccchh
Confidence 78889998887732112655543222221 1122221 12 3445666666655 33220
Q ss_pred ----cccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 410 ----PSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 410 ----~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
..|-...-.....++-+.++...+++|+++++++|+++.+..++
T Consensus 398 ~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~ 445 (450)
T 3bc8_A 398 GHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRK 445 (450)
T ss_dssp TEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 00100000123567888889999999999999999998776643
No 237
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=52.29 E-value=13 Score=31.69 Aligned_cols=37 Identities=19% Similarity=0.146 Sum_probs=30.8
Q ss_pred CccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEE
Q psy15447 216 VTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFV 252 (457)
Q Consensus 216 ~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~ 252 (457)
-..+.|++|=+.+..|.+..++++.+++++||+.+|.
T Consensus 158 l~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 158 LQPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp SCSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEEE
T ss_pred CCceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 3457888886646889999999999999999987763
No 238
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=48.11 E-value=41 Score=20.98 Aligned_cols=30 Identities=17% Similarity=0.203 Sum_probs=25.4
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 422 PSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 422 ~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
.++||++.. -|+.+-+++...+-+++.++.
T Consensus 2 ervrisita-rtkkeaekfaailikvfaelg 31 (62)
T 2gjh_A 2 ERVRISITA-RTKKEAEKFAAILIKVFAELG 31 (62)
T ss_dssp CEEEEEEEC-SSHHHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEEEe-cchhHHHHHHHHHHHHHHHhC
Confidence 468999876 689999999999999888875
No 239
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=46.47 E-value=25 Score=29.96 Aligned_cols=37 Identities=8% Similarity=0.064 Sum_probs=30.3
Q ss_pred CccEEEEEecC-CCCCCCCCChHHHHHHHHHcCcEEEE
Q psy15447 216 VTKKFIIVEGV-YMNSADICPLKDILSLRSKYQARIFV 252 (457)
Q Consensus 216 ~~~~~vi~e~v-~~~~G~i~~l~~i~~l~~~~g~~li~ 252 (457)
-..+.+++|-+ .+..|.+..++++.+++++||+.+|.
T Consensus 157 l~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 157 LQPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALIT 194 (206)
T ss_dssp SCSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEE
T ss_pred CCceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 34578888863 55789999999999999999998774
No 240
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=42.20 E-value=31 Score=29.70 Aligned_cols=36 Identities=6% Similarity=0.100 Sum_probs=29.4
Q ss_pred CccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEE
Q psy15447 216 VTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFV 252 (457)
Q Consensus 216 ~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~ 252 (457)
-..+.|++|=+ +..|....++++.+++++||+.+|.
T Consensus 166 l~Pa~vicEi~-~~dG~mar~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 166 FKPAGVLCELT-NDDGTMARAPECIEFANKHNMALVT 201 (217)
T ss_dssp SCSCEEEEEBB-CTTSSBCCHHHHHHHHHHTTCEEEE
T ss_pred CCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCCEEE
Confidence 34567888755 5779999999999999999988764
No 241
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=41.50 E-value=28 Score=34.59 Aligned_cols=26 Identities=12% Similarity=0.064 Sum_probs=21.7
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcCc
Q psy15447 231 ADICPLKDILSLRSKYQARIFVDESV 256 (457)
Q Consensus 231 G~i~~l~~i~~l~~~~g~~li~DEa~ 256 (457)
|...+++++++-||++|+.+|+|=|.
T Consensus 90 Gt~~dfk~Lv~~aH~~GI~VilD~V~ 115 (527)
T 1gcy_A 90 GSDAQLRQAASALGGAGVKVLYDVVP 115 (527)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEee
Confidence 44445889999999999999999874
No 242
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=37.39 E-value=31 Score=29.85 Aligned_cols=36 Identities=8% Similarity=-0.006 Sum_probs=29.8
Q ss_pred CccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEE
Q psy15447 216 VTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFV 252 (457)
Q Consensus 216 ~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~ 252 (457)
-..+.|++|=+ +..|.+..++++.+++++||+.+|.
T Consensus 177 l~Pa~VicEi~-~ddG~mar~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 177 LVPITTICEMM-GDDGNAMSKNETKRYAEKHNLIYLS 212 (227)
T ss_dssp SCSEEEEEEEB-CTTSSBCCHHHHHHHHHHHTCCEEE
T ss_pred CCceEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 45578888855 5679999999999999999987764
No 243
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=36.99 E-value=1e+02 Score=21.29 Aligned_cols=30 Identities=17% Similarity=0.202 Sum_probs=25.7
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447 422 PSIRITCNISHTEQDMNSLIETLCKSHDIAV 452 (457)
Q Consensus 422 ~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 452 (457)
.++||++.. -|+.+-+++...+-+++.++.
T Consensus 46 krvrisita-rtkkeaekfaailikvfaelg 75 (106)
T 1qys_A 46 KRVRISITA-RTKKEAEKFAAILIKVFAELG 75 (106)
T ss_dssp SEEEEEEEC-SSHHHHHHHHHHHHHHHHHTT
T ss_pred cEEEEEEEe-cchhHHHHHHHHHHHHHHHhC
Confidence 579999976 689999999999999888774
No 244
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=33.76 E-value=31 Score=34.99 Aligned_cols=26 Identities=8% Similarity=-0.027 Sum_probs=21.5
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcCc
Q psy15447 231 ADICPLKDILSLRSKYQARIFVDESV 256 (457)
Q Consensus 231 G~i~~l~~i~~l~~~~g~~li~DEa~ 256 (457)
|...+++++++-||++|+.+|+|-|.
T Consensus 196 Gt~~df~~Lv~~aH~~Gi~VilD~V~ 221 (601)
T 3edf_A 196 GSNEDFVRLSTEARKRGMGLIQDVVL 221 (601)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEECC
Confidence 33444889999999999999999884
No 245
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=30.16 E-value=1.1e+02 Score=24.43 Aligned_cols=54 Identities=19% Similarity=0.272 Sum_probs=35.4
Q ss_pred CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC-h---HHHH-HHHHHcCc-EEEEEcCcc
Q psy15447 194 NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP-L---KDIL-SLRSKYQA-RIFVDESVS 257 (457)
Q Consensus 194 ~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~-l---~~i~-~l~~~~g~-~li~DEa~~ 257 (457)
.+.+.|.+++++. .+..++++-+.++.|...+ . ++.. .+++++++ +..+||.++
T Consensus 42 ~~~~~l~~li~~~----------~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~T 101 (150)
T 1vhx_A 42 YGLSRLSELIKDY----------TIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLT 101 (150)
T ss_dssp CCHHHHHHHHTTS----------EEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSC
T ss_pred HHHHHHHHHHHHc----------CCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCC
Confidence 3678888888774 3457777777778787765 2 2333 44445665 567799754
No 246
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=29.09 E-value=1.7e+02 Score=22.26 Aligned_cols=59 Identities=12% Similarity=0.123 Sum_probs=35.0
Q ss_pred CeEEEecCCCHHHHHHHHHhhchhcccCCC---CccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEE
Q psy15447 186 CKVQYFKHNNMQHLEELLRQQDERDTLNSK---VTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIF 251 (457)
Q Consensus 186 ~~~~~~~~~d~~~le~~l~~~~~~~~~~~~---~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li 251 (457)
..+...+..|++.+.+.|++.-.. .|. ....++=++... ...++.+|.++|++||+.+|
T Consensus 17 l~vl~l~~~d~~~l~~~L~~ki~~---aP~FF~~aPVVlDl~~l~----~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 17 LSVVHLHEAEPEVIRQALEDKIAQ---APAFLKHAPVVINVSGLE----SPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CEEEEEESCCHHHHHHHHHHHHHH---SHHHHTTCEEEEEEEECC----SSCCHHHHHHHHHTTTCEEE
T ss_pred EEEEEeCCCCHHHHHHHHHHHHHh---ChHhhCCCcEEEEccccC----ChHHHHHHHHHHHHcCCEEE
Confidence 345566677888877766553321 110 112222233332 23579999999999999874
No 247
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=28.32 E-value=36 Score=32.69 Aligned_cols=27 Identities=15% Similarity=0.202 Sum_probs=22.3
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcCcc
Q psy15447 231 ADICPLKDILSLRSKYQARIFVDESVS 257 (457)
Q Consensus 231 G~i~~l~~i~~l~~~~g~~li~DEa~~ 257 (457)
|...+++++++-||++|+.+|+|=+..
T Consensus 79 Gt~~d~~~lv~~ah~~Gi~vilD~V~N 105 (424)
T 2dh2_A 79 GSKEDFDSLLQSAKKKSIRVILDLTPN 105 (424)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 444558899999999999999999853
No 248
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=27.49 E-value=3.3e+02 Score=24.18 Aligned_cols=120 Identities=12% Similarity=0.020 Sum_probs=63.2
Q ss_pred HHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcC--CCCEEEEeC--cccHHH--HHHHHhcCCeEEEecCCCHHHHH
Q psy15447 127 HLDLENDIASFMGLEETALYSFGFSTSASAIAAYVK--RNDAVFVDE--NINFAI--QTGLIASRCKVQYFKHNNMQHLE 200 (457)
Q Consensus 127 ~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~--~gd~v~~~~--~~h~~~--~~~~~~~g~~~~~~~~~d~~~le 200 (457)
..++.+.-+++......+++.+.+......+....+ +.-.|++.+ |...+. ...+...|.++..+..+-..
T Consensus 96 ~~~Ia~~a~~~I~~g~~IlT~~~s~Tv~~~l~~a~~~~~~~~V~v~etrP~~qG~~~a~~L~~~gI~vtli~dsa~~--- 172 (276)
T 1vb5_A 96 KRELASIGAQLIDDGDVIITHSFSSTVLEIIRTAKERKKRFKVILTESSPDYEGLHLARELEFSGIEFEVITDAQMG--- 172 (276)
T ss_dssp HHHHHHHHHHHCCTTEEEECCSCCHHHHHHHHHHHHTTCCEEEEEECCTTTTHHHHHHHHHHHTTCCEEEECGGGHH---
T ss_pred HHHHHHHHHHHccCCCEEEEeCCChHHHHHHHHHHHcCCeEEEEEeCCCcchhhHHHHHHHHHCCCCEEEEcHHHHH---
Confidence 344555566666655667654444444445554433 334566633 444332 23344467777777633222
Q ss_pred HHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC--hHHHHHHHHHcCcEEEEE-cCcccc
Q psy15447 201 ELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP--LKDILSLRSKYQARIFVD-ESVSFG 259 (457)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~--l~~i~~l~~~~g~~li~D-Ea~~~g 259 (457)
..+... ...++=.+.+..++|.... --.+..+|++|++.+++= +.+.+.
T Consensus 173 ~~m~~v----------d~vivGAd~i~~nG~v~nkiGt~~iA~~A~~~~vp~~V~a~~~K~~ 224 (276)
T 1vb5_A 173 LFCREA----------SIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYVAAETYKFH 224 (276)
T ss_dssp HHHTTC----------SEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCCEEEECCGGGBC
T ss_pred HHHccC----------CEEEEcccEEecCCCEeechhHHHHHHHHHHcCCCEEEeccccccC
Confidence 244321 2234445666655555544 357888899998866653 344444
No 249
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=26.57 E-value=1.2e+02 Score=21.03 Aligned_cols=47 Identities=13% Similarity=0.104 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 392 LLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 392 ~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
.+.++.+.|...|+-.... ......|+.+....++++.+++.+.|++
T Consensus 22 ~A~~l~~~L~~~G~~a~i~--------~~~~~yRV~vGpf~s~~~A~~~~~~L~~ 68 (81)
T 1uta_A 22 QAETVRAQLAFEGFDSKIT--------TNNGWNRVVIGPVKGKENADSTLNRLKM 68 (81)
T ss_dssp HHHHHHHHHHHHTCCEEEE--------ECSSSEEEEESSCBTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCeEEE--------eCCcEEEEEECCcCCHHHHHHHHHHHHH
Confidence 6778888998888643221 1235677777777789999999998876
No 250
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=25.08 E-value=3.4e+02 Score=25.53 Aligned_cols=89 Identities=12% Similarity=0.141 Sum_probs=53.2
Q ss_pred CEEEEeCcc--cHHHHHHHHhcCCeEEEec-C-CCHHHHHHHHHhhchhcccCCCCccEEEEEec-CCC-CC--CCCCCh
Q psy15447 165 DAVFVDENI--NFAIQTGLIASRCKVQYFK-H-NNMQHLEELLRQQDERDTLNSKVTKKFIIVEG-VYM-NS--ADICPL 236 (457)
Q Consensus 165 d~v~~~~~~--h~~~~~~~~~~g~~~~~~~-~-~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~-v~~-~~--G~i~~l 236 (457)
|.+-+.... +...+..+.-.|.++..-. . .++++++.+++..... ++..+++++- +.+ |+ =...++
T Consensus 227 d~lkIgs~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~------Gn~~i~L~~rG~s~yp~~~~~~ldl 300 (385)
T 3nvt_A 227 DVIQIGARNMQNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQ------GNGKIILCERGIRTYEKATRNTLDI 300 (385)
T ss_dssp SEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTT------TCCCEEEEECCBCCSCCSSSSBCCT
T ss_pred CEEEECcccccCHHHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHc------CCCeEEEEECCCCCCCCCCccccCH
Confidence 555444332 4455555555555544322 2 4788887777665421 2345667764 321 22 123568
Q ss_pred HHHHHHHHHcCcEEEEEcCcccc
Q psy15447 237 KDILSLRSKYQARIFVDESVSFG 259 (457)
Q Consensus 237 ~~i~~l~~~~g~~li~DEa~~~g 259 (457)
..|..+.+.+++.+++|-+|+.|
T Consensus 301 ~~i~~lk~~~~lpV~~D~th~~G 323 (385)
T 3nvt_A 301 SAVPILKKETHLPVMVDVTHSTG 323 (385)
T ss_dssp THHHHHHHHBSSCEEEEHHHHHC
T ss_pred HHHHHHHHhcCCCEEEcCCCCCC
Confidence 88888888899999999988754
No 251
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=24.57 E-value=69 Score=27.80 Aligned_cols=36 Identities=8% Similarity=0.134 Sum_probs=29.0
Q ss_pred CccEEEEEecCCCC-----------CCCCCChHHHHHHHHHcCcEEEE
Q psy15447 216 VTKKFIIVEGVYMN-----------SADICPLKDILSLRSKYQARIFV 252 (457)
Q Consensus 216 ~~~~~vi~e~v~~~-----------~G~i~~l~~i~~l~~~~g~~li~ 252 (457)
-..+.|++|=+ +. .|.+..++++.+++++||+.+|.
T Consensus 166 l~PagVicEi~-~~~~~~~~~~~~~dG~mar~~~l~~fA~~h~L~iit 212 (233)
T 1k4i_A 166 KRPVAVISEIV-DDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCT 212 (233)
T ss_dssp CCSBEEEEEBE-ECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEEE
T ss_pred CCceEEEEEeC-CCcccccccccCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 34567888755 45 69999999999999999998765
No 252
>1nxi_A Conserved hypothetical protein VC0424; structural genomics, AB sandwich, COG 3076, ATCC NO. 51394D, NESG target OP3, PSI; NMR {Vibrio cholerae} SCOP: d.58.47.1
Probab=23.47 E-value=2.6e+02 Score=21.69 Aligned_cols=60 Identities=10% Similarity=0.113 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHcCeeEeccccCccccCCCCC--eEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447 392 LLQTICDMCIQAGFAITCPSHLDQEAKKQKP--SIRITCNISHTEQDMNSLIETLCKSHDIAVQ 453 (457)
Q Consensus 392 ~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~--~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 453 (457)
.+.+++..+.+.|+-+........ ..+.+ .+.++.....+.+.|......|.++.+....
T Consensus 52 ~~e~~a~~~~~~Gy~v~~~~~~e~--e~g~~~~~~~i~~~~~l~~~~I~~~~~~L~~lA~~~~G 113 (132)
T 1nxi_A 52 KLEKAAVEAFKMGFEVLEAEETED--EDGNKLLCFDATMQSALDAKLIDEQVEKLVNLAEKFDI 113 (132)
T ss_dssp HHHHHHHHHHHHTCCCBCCCCBCC--SSCSSBEEEEEEEEECSCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHCCCEEEecccccC--CCCceeEEEEEEEeccCCHHHHHHHHHHHHHHHHHhCc
Confidence 778899999999987753221100 11112 5777777778899999999999888776654
No 253
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=23.23 E-value=1.8e+02 Score=19.84 Aligned_cols=47 Identities=6% Similarity=0.080 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447 392 LLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK 446 (457)
Q Consensus 392 ~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 446 (457)
.+..+.+.|..+|+-..... .....|+.+....++++.+++++.|++
T Consensus 22 ~A~~~~~~L~~~g~~~~i~~--------~~~~yRV~vGpf~~~~~A~~~~~~L~~ 68 (79)
T 1x60_A 22 NADSLASNAEAKGFDSIVLL--------KDGLYKVQIGAFSSKDNADTLAARAKN 68 (79)
T ss_dssp HHHHHHHHHHHHTCCEEEEE--------ETTEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCeEEec--------CCcEEEEEECCcCCHHHHHHHHHHHHH
Confidence 67788888888885432211 134556666556789999999999886
No 254
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=23.12 E-value=39 Score=34.94 Aligned_cols=55 Identities=5% Similarity=0.253 Sum_probs=36.1
Q ss_pred CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC-----------------CCCCChHHHHHHHHHcCcEEEEEcCc
Q psy15447 195 NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS-----------------ADICPLKDILSLRSKYQARIFVDESV 256 (457)
Q Consensus 195 d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~-----------------G~i~~l~~i~~l~~~~g~~li~DEa~ 256 (457)
|+..+.+.|..+.+ -.+-+|.+.|++... |+...++++++-||++|+.+|+|-+.
T Consensus 263 dl~Gi~~kLdyLk~-------LGvt~IwL~Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V~ 334 (696)
T 4aee_A 263 DLAGIMKHIDHLED-------LGVETIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDITM 334 (696)
T ss_dssp CHHHHHTTHHHHHH-------HTCCEEEECCCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CHHHHHHHhHHHHH-------cCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEeccc
Confidence 56666555554432 234567777665321 23334789999999999999999874
No 255
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=23.03 E-value=42 Score=23.96 Aligned_cols=20 Identities=20% Similarity=0.295 Sum_probs=17.9
Q ss_pred hHHHHHHHHHcCcEEEEEcC
Q psy15447 236 LKDILSLRSKYQARIFVDES 255 (457)
Q Consensus 236 l~~i~~l~~~~g~~li~DEa 255 (457)
-.+|+++++++|+.++.|..
T Consensus 29 A~~I~~~A~e~~VPi~e~~~ 48 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIP 48 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 36999999999999999974
No 256
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=22.26 E-value=54 Score=16.96 Aligned_cols=14 Identities=21% Similarity=0.368 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHHHH
Q psy15447 340 SLLTKLREKCNTMH 353 (457)
Q Consensus 340 ~~~~~l~~~~~~l~ 353 (457)
.+.++++...+.++
T Consensus 12 dlqerlrklrkklr 25 (27)
T 3twe_A 12 DLQERLRKLRKKLR 25 (27)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 34555555554443
No 257
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=21.63 E-value=40 Score=32.73 Aligned_cols=26 Identities=15% Similarity=0.364 Sum_probs=21.6
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcCc
Q psy15447 231 ADICPLKDILSLRSKYQARIFVDESV 256 (457)
Q Consensus 231 G~i~~l~~i~~l~~~~g~~li~DEa~ 256 (457)
|+...++++++-|+++|+.+|+|=|.
T Consensus 74 Gt~~df~~lv~~aH~~Gi~VilD~V~ 99 (496)
T 4gqr_A 74 GNEDEFRNMVTRCNNVGVRIYVDAVI 99 (496)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 33344889999999999999999884
No 258
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=20.89 E-value=4.7e+02 Score=23.72 Aligned_cols=113 Identities=14% Similarity=0.093 Sum_probs=62.0
Q ss_pred HHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCC--EEEEeC--cccHH--HHHHHHhcCCeEEEecCCCHHHHHH
Q psy15447 128 LDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRND--AVFVDE--NINFA--IQTGLIASRCKVQYFKHNNMQHLEE 201 (457)
Q Consensus 128 ~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd--~v~~~~--~~h~~--~~~~~~~~g~~~~~~~~~d~~~le~ 201 (457)
....+.-+++......+++.+.+......+....+.|. .|++.+ |.+.+ +...+.-.|.++..+.-+- +..
T Consensus 109 ~~I~~~~~~~I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~la~~L~~~gI~vtli~Dsa---~~~ 185 (315)
T 3ecs_A 109 NKIADLCHTFIKDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKMAKALCHLNVPVTVVLDAA---VGY 185 (315)
T ss_dssp HHHHHHHGGGCCTTEEEEECSCCHHHHHHHHHHHTTTCCEEEEEECCTTTTHHHHHHHHHHTTTCCEEEECGGG---HHH
T ss_pred HHHHHHHHHHcCCCCEEEEcCCcHHHHHHHHHHHHcCCeEEEEEecCCCcchHHHHHHHHHHcCCCEEEEehhH---HHH
Confidence 44555555666666667776666666666665544443 455543 33322 2334455577776664332 233
Q ss_pred HHHhhchhcccCCCCccEEEEEecCCCCCCCCCCh--HHHHHHHHHcCcEEEEE
Q psy15447 202 LLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPL--KDILSLRSKYQARIFVD 253 (457)
Q Consensus 202 ~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l--~~i~~l~~~~g~~li~D 253 (457)
.+++. ...++=.+.+..++|.+..+ -.+.-+|+.||+.+++=
T Consensus 186 ~m~~v----------d~VivGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V~ 229 (315)
T 3ecs_A 186 IMEKA----------DLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVV 229 (315)
T ss_dssp HGGGC----------SEEEEECSEECTTSCEEEETTHHHHHHHHHHTTCCEEEE
T ss_pred HHHhC----------CEEEECceEEecCCCeeehhhhHHHHHHHHHhCCCEEEE
Confidence 44332 22344455566555555443 46788899999977663
No 259
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=20.85 E-value=56 Score=29.39 Aligned_cols=21 Identities=29% Similarity=0.369 Sum_probs=18.4
Q ss_pred ChHHHHHHHHHcCcEEEEEcC
Q psy15447 235 PLKDILSLRSKYQARIFVDES 255 (457)
Q Consensus 235 ~l~~i~~l~~~~g~~li~DEa 255 (457)
.++++.++|+++|+.+|+|--
T Consensus 91 ~~d~~~~~a~~~Gi~vil~~~ 111 (351)
T 3vup_A 91 DMKDLLDTAKKYNILVFPCLW 111 (351)
T ss_dssp HHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHCCCeEEEEec
Confidence 378999999999999998863
Done!